BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781033|ref|YP_003065446.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] (492 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781033|ref|YP_003065446.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040710|gb|ACT57506.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] Length = 492 Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/492 (100%), Positives = 492/492 (100%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA Sbjct: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY Sbjct: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA Sbjct: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG Sbjct: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT Sbjct: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI Sbjct: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW Sbjct: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420 Query: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH Sbjct: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480 Query: 481 IRQPDDPGIKEQ 492 IRQPDDPGIKEQ Sbjct: 481 IRQPDDPGIKEQ 492 >gi|315122373|ref|YP_004062862.1| HemY domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495775|gb|ADR52374.1| HemY domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 487 Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust. Identities = 290/480 (60%), Positives = 368/480 (76%), Gaps = 4/480 (0%) Query: 14 VICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLF 73 +ICSFI +S+YP+D+ +TWGNR+Y+TSPFV+LSI+Y +F ++L+ +SRFFLSCP+ + Sbjct: 1 MICSFIAISYYPDDIYVTWGNRIYQTSPFVMLSIVYILIFTFMLISKISRFFLSCPSTIA 60 Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 ++ HKRNY KGYK L GL+SI A NIPLARKM SY+S +H FHNE L +LLE QIAL+E Sbjct: 61 NIFHKRNYAKGYKELSAGLISITAQNIPLARKMFSYLSHRHIFHNESLFHLLEAQIALSE 120 Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++++IA EK EMMLQIP TREFA+Y+LY E RIGDL SAQ YA KAL ISP W EA Sbjct: 121 KKHHIAREKFEMMLQIPETREFAIYNLYCEFYRIGDLKSAQCYAKKALKISPYISWGIEA 180 Query: 194 VVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q Y L KEWS+AI FLN+ KK N + +N ++AILL ARSLENA+KGD++ASY+DA+ Sbjct: 181 MLQYYALEKEWSKAIDFLNKNKKYENIETYNHHQAILLTARSLENAEKGDVVASYNDAMV 240 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 LKLC +SIMASICAAK+LI QNKK KA V+LEKIW++NPHPEIA IYT +LS N ++ Sbjct: 241 VLKLCKHSIMASICAAKALILQNKKNKAAVVLEKIWEINPHPEIAYIYTIILSNNATERM 300 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 RAL+LE INK+++ESL+ V+KI+LE G+I QA KAMLA K PRK IFLLLA+IE+A+ Sbjct: 301 NRALKLEAINKKNIESLITVAKISLETGNIQQAQTKAMLAAKANPRKGIFLLLAKIERAS 360 Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS 431 S+N DKILYWTQ AL+ PDPLWISDDGY SS WLPLSP SK LC FEWK+P K PEY + Sbjct: 361 SNNLDKILYWTQRALYTEPDPLWISDDGYCSSTWLPLSPTSKKLCRFEWKVPAKIPEYTT 420 Query: 432 SEN-INFSLEMAYPADDLQSMLNNGKKNHLPSI-KKVSSFEDSTIHPLDPHIRQPDDPGI 489 +++ I++ + ++ N KN PSI + ++ I LDP IRQPDDPG+ Sbjct: 421 NKDLISYDESETFMTHLQETKRNKNIKNPYPSIHQDYHHPKNRNILSLDPSIRQPDDPGV 480 >gi|150398166|ref|YP_001328633.1| HemY domain-containing protein [Sinorhizobium medicae WSM419] gi|150029681|gb|ABR61798.1| HemY domain protein [Sinorhizobium medicae WSM419] Length = 551 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 171/540 (31%), Positives = 274/540 (50%), Gaps = 52/540 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + ++ + F ++ P ++S+ W +L S S+L A ++ Sbjct: 1 MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLLRAASLLISVFAAVLIAVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R S P + R D+GY+AL TGL++ A + LARKM + + E Sbjct: 61 LLRTIWSSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDANLARKMTARTRSLISSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E +Y+ A +K E+M P TRE + LY E+ R+G +A+ YA +A Sbjct: 121 LIHLLEAQTSLIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARHYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 + +P PW T A + A++W AI L+Q + KE +R +A+LL AR++E Sbjct: 181 AEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAANVLERKEADRKKAVLLTARAMEQ 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D ++ DA +LKL D+ + A++ AAK+L ++ RK ILEK+WK++PHPEIA Sbjct: 241 LE-ADPKSARDDARAALKLDDSLVPAALVAAKALFREDNLRKGASILEKMWKLDPHPEIA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y ++ + +LKRA RLE + + SL V++ ALE + A KA A +I Sbjct: 300 RLYVRARGGDSALDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARTKAEAAARID 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLLLA IE+A++ + +I YW AL + DP W + DG S WLP+SP++ L Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRYWMSQALRSPRDPAWTA-DGVTSPSWLPVSPVTGRL 418 Query: 416 CYFEWKIPTKS-------------------------PEYISSENINFSLEMAYPADDLQS 450 FEWK P P + +++ A PA+ +++ Sbjct: 419 DAFEWKAPPARLPAATEEGYLNPDAAIRSLPPVATVPRPATEPETESAVDAAPPAERVEA 478 Query: 451 ------------------MLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI-RQPDDPGIKE 491 + +K +P++ + +DS P DP R PDDPG++E Sbjct: 479 EPEKAITVPDPNETVAPPAGDPNRKEPVPAVASPAKGKDSEEAP-DPFFGRPPDDPGVRE 537 >gi|86359488|ref|YP_471380.1| hypothetical protein RHE_CH03907 [Rhizobium etli CFN 42] gi|86283590|gb|ABC92653.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 535 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 156/428 (36%), Positives = 240/428 (56%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + + L+ F + P D+S+ W ++Y+T V +S + + A ++++ Sbjct: 1 MIRLVVFALFVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 61 FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLLAVLLTARAAEK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + DA+++LKL + + A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 241 LE-GNPAGARDDALQALKLAVDLVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIG 299 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y S ++T+ +LKRA RLE + +VESL++V++ AL+ +A +KA A +I Sbjct: 300 QTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARSKAEAAARIE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ + Sbjct: 360 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 418 Query: 416 CYFEWKIP 423 FEWK P Sbjct: 419 DAFEWKAP 426 >gi|222087479|ref|YP_002546016.1| hypothetical protein Arad_4359 [Agrobacterium radiobacter K84] gi|221724927|gb|ACM28083.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 532 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 163/447 (36%), Positives = 250/447 (55%), Gaps = 7/447 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + ++ + F ++ P D+S+ W +LY+T V IL + A ++++ Sbjct: 1 MIRLLIFALLVLALGYGFSWLADRPGDLSLVWEGQLYQTKLIVAAGILIALVAATMIVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 61 FIRLIWNSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARTRGLIRADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A +K E+M P TRE + LY E+ R+G +A++YA KA Sbjct: 121 LINLLEAQAALIEGKHDEARQKFELMANDPETRELGLRGLYLEAKRLGANEAARQYAEKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L+Q+K + + NR RA+LL AR+ + Sbjct: 181 ADHAPYLPWAAQATLEYRSQAGNWDDAIKLLDQQKVAHVVDKETANRQRAVLLTARANDK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D + DA+ +LKL + + A++ AAK+L ++K RKA +LE++WK PHPEI Sbjct: 241 LES-DPAGARDDALAALKLSADFVPAALTAAKALFREDKVRKAASMLEQVWKAKPHPEIG 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y S ++V +LKRA RLE I +VE+L++ +K AL+ +A AKA A +I Sbjct: 300 KAYVRARSGDSVTDRLKRAERLEAIRPNNVEALLVTAKAALDAHDFAKARAKAEAAARID 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ FLLLA IE+A +++ ++ +W AL A DP W++ DG++S WLPLSPI+ L Sbjct: 360 AREGAFLLLADIEEAETNDQGRVRHWMAQALRAPRDPAWVA-DGFVSDKWLPLSPITGRL 418 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMA 442 FEWK P E E S++ A Sbjct: 419 DAFEWKAPFGQIEGPLEEGTAVSVDAA 445 >gi|15966835|ref|NP_387188.1| hypothetical protein SMc03234 [Sinorhizobium meliloti 1021] gi|307301663|ref|ZP_07581422.1| HemY domain protein [Sinorhizobium meliloti BL225C] gi|307316313|ref|ZP_07595757.1| HemY domain protein [Sinorhizobium meliloti AK83] gi|15076107|emb|CAC47661.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306898153|gb|EFN28895.1| HemY domain protein [Sinorhizobium meliloti AK83] gi|306903361|gb|EFN33950.1| HemY domain protein [Sinorhizobium meliloti BL225C] Length = 545 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 149/428 (34%), Positives = 237/428 (55%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + ++ + F ++ P ++S+ W +L S SIL A +++ Sbjct: 1 MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLMRAASILISLFAAVLIVVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + R D+GY+AL TGL++ A + LARKM + + E Sbjct: 61 LLRTIWLSPHTVTRYFRSRKRDRGYQALSTGLIAAGAGDANLARKMAARTRNLISSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q AL E +Y+ A +K E M P TRE + LY E+ R+G +A++YA +A Sbjct: 121 LIHLLEAQTALIEGKYDDARKKFEAMADDPETRELGLRGLYLEAKRLGANEAARQYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 + +P PW T A + A++W AI L+Q + E +R +A+LL AR++E Sbjct: 181 SEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAAHVLEKNEADRKKAVLLTARAMER 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D ++ DA +LKL D + A++ AAK+L + RK ILE++WK++PHP+IA Sbjct: 241 LD-ADPKSARDDAQAALKLDDRLVPAALVAAKALFREENLRKGASILERMWKLDPHPDIA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y ++ + +LKRA +LE + + +L V++ AL+ + A KA A ++ Sbjct: 300 RLYVRARGGDSALDRLKRAKKLESLRSNNAVALATVAEAALDARELALARTKAEAAARLE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLLLA IE+A++ + +I +W AL + DP W + DG S VWLP+SP+S L Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRHWMAQALKSPRDPAWTA-DGVTSPVWLPVSPVSGRL 418 Query: 416 CYFEWKIP 423 FEWK P Sbjct: 419 DAFEWKAP 426 >gi|159185310|ref|NP_355592.2| hypothetical protein Atu2656 [Agrobacterium tumefaciens str. C58] gi|159140568|gb|AAK88377.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 538 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 152/428 (35%), Positives = 237/428 (55%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + ++ + F ++ P +SI W +L S V SI+ + A +L++ Sbjct: 1 MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + P R D+GY+AL TGL++ A N LARKM + + E Sbjct: 61 VVNAVWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+ Q L E +Y+ A K E M + P TRE + LY E+ R G +AQ+YA A Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAYEAAQQYAEDA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + +P PW +A ++ +W AI L+Q+K + E R +A+LL A++ E Sbjct: 181 AEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D +++ DA +LKL + A++ AAKS + ++ RKA +LE +WK PHP+IA Sbjct: 241 LES-DPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIA 299 Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y S +T + +LKRA RLE + ++ESL V++ AL+ +A AKA A +I Sbjct: 300 QLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLL+A IE+A + + ++ YW AL A DP W++ DG +S WLP+SP++ L Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVA-DGIVSEKWLPVSPVTGRL 418 Query: 416 CYFEWKIP 423 FEWK P Sbjct: 419 DAFEWKAP 426 >gi|325294024|ref|YP_004279888.1| HemY domain protein [Agrobacterium sp. H13-3] gi|325061877|gb|ADY65568.1| HemY domain protein [Agrobacterium sp. H13-3] Length = 535 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 151/428 (35%), Positives = 237/428 (55%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + ++ + F ++ P +SI W +L S V SI+ + A +L++ Sbjct: 1 MTRILTFVLIVLALGFGFSWLADRPGVLSIVWQGQLIEMSLMVAASIVAALVAAVMLVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + P R D+GY+AL TGL++ A N LARKM + + E Sbjct: 61 VVNAIWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+ Q L E +Y+ A K E M + P TRE + LY E+ R G +AQ+YA A Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAHEAAQQYAEDA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + +P PW +A ++ EW AI L+Q+K E R +A+LL A++ E Sbjct: 181 AEKAPYLPWAAQATLETRCRNGEWDDAIRLLDQQKAAGVIQRGEAERLKAVLLTAKAGEK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D + + DA ++LKL + + A++ AAKS + ++ RKA ++E +WK +PH +IA Sbjct: 241 LES-DPVGAREDAKQALKLAKSLVPAALIAAKSYLREDNLRKAAAVMEPVWKNDPHSQIA 299 Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++Y S +T + +LKRA RLE + ++ESL V++ AL+ +A AKA A +I Sbjct: 300 DLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLL+A IE+A + + ++ YW AL A DP+W++ DG S WLP+SP++ L Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPVWVA-DGVTSEKWLPVSPVTGRL 418 Query: 416 CYFEWKIP 423 FEWK P Sbjct: 419 DAFEWKAP 426 >gi|327188880|gb|EGE56072.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512] Length = 580 Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 154/412 (37%), Positives = 231/412 (56%), Gaps = 7/412 (1%) Query: 17 SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76 F + P D+S+ W ++Y+T V +S + + A ++++ R + P + Sbjct: 62 GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTRYF 121 Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 R D+GY+AL TGL++ A N LARKM + E L+ LLE Q AL E ++ Sbjct: 122 RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 181 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A K E M P TRE + LY E+ R+G +A++YA KA D +P PW +A ++ Sbjct: 182 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 241 Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A W AI L Q+K E NR A+LL AR+ E + GD + DA+++ Sbjct: 242 YRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEKLE-GDPAGARDDALQA 300 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKL 311 LKL + + A++ AAK+L + RKA ILE+ WK PHPEI Y S ++T+ +L Sbjct: 301 LKLAADLVPAALIAAKALFREGGLRKAASILEQAWKSKPHPEIGQTYVKARSGDSTLDRL 360 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 KRA RLE + +VESL++V++ AL+ +A AKA A +I PR+ FLLLA IE+A Sbjct: 361 KRAERLEALRPNNVESLLVVAQAALDTQEFAKARAKAEAAARIEPREAAFLLLADIEEAE 420 Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423 + + ++ +W AL A DP W++ DG++S WLP+SP++ + FEWK P Sbjct: 421 TGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRIDAFEWKAP 471 >gi|241206707|ref|YP_002977803.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860597|gb|ACS58264.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 544 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 156/428 (36%), Positives = 237/428 (55%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++RL+ + + L+ F ++ P D+S+ W R+Y+T V S + + A ++ + Sbjct: 2 LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGRIYQTKLIVAASAIIALVAAVMIAWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 62 FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + DA+++LKL + I A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 242 LES-NPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y S ++T+ +LKRA RLE +VESL++V++ AL+ +A AKA A ++ Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ L Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419 Query: 416 CYFEWKIP 423 FEWK P Sbjct: 420 DAFEWKAP 427 >gi|116254227|ref|YP_770065.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115258875|emb|CAK09983.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 542 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 155/428 (36%), Positives = 236/428 (55%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++RL+ + + L+ F ++ P D+S+ W ++Y+T V S + + A ++ + Sbjct: 2 LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALVAAVMIAWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 62 FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + DA+++LKL + I A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 242 LES-NPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y S ++T+ +LKRA RLE +VESL++V++ AL+ +A AKA A + Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAAHMQ 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ L Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419 Query: 416 CYFEWKIP 423 FEWK P Sbjct: 420 DAFEWKAP 427 >gi|227823721|ref|YP_002827694.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium fredii NGR234] gi|227342723|gb|ACP26941.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium fredii NGR234] Length = 541 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 164/448 (36%), Positives = 248/448 (55%), Gaps = 13/448 (2%) Query: 4 LIRYFFVISLVIC---SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++R F I LV+ F ++ P ++S+ W +L S +IL LFA IL+ A Sbjct: 1 MVRILFFILLVLALALGFAWLADRPGELSLIWQGQLIEMSLMRAATIL-ISLFAAILIVA 59 Query: 61 -VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + R P + R D+GY+AL TGL++ A + LARKM + E Sbjct: 60 WLIRTLWLSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDAALARKMAGRTRGLISADQE 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L++LLE Q AL E +Y+ A +K E+M P TRE + LY E+ R+G +A++YA + Sbjct: 120 PLIHLLEAQTALIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARQYAER 179 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLE 235 A + +P W T A + Q A +W AI L+Q + + KE NR +A+LL AR+ Sbjct: 180 AAEKAPHLSWATLATLDQRSQAGQWDEAIRLLDQSRTANVLDKKEANRKKAVLLTARATG 239 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + D A+ DA+ +LKL D + A++ AAK+L ++ RK +LEK+WK +PHPE+ Sbjct: 240 KLE-ADPKAARDDALAALKLDDRLVPAALTAAKALFREDNLRKGASVLEKVWKQDPHPEL 298 Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A +Y ++ V +LKRA RLE + + SL V++ ALE + A +KA A ++ Sbjct: 299 ARLYVRARGGDSAVDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARSKAEAAARL 358 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 AP + IFLL+A IE+A++ + +I +W AL + DP W + DG S WLP+SP+S Sbjct: 359 APSESIFLLIADIEEADTGDEGRIRHWMAQALRSPRDPAWTA-DGVTSPTWLPVSPVSGR 417 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMA 442 L FEWK P SP ++E S++ A Sbjct: 418 LDAFEWKEPP-SPLAGTTEEGRVSVDEA 444 >gi|190893756|ref|YP_001980298.1| hypothetical protein [Rhizobium etli CIAT 652] gi|190699035|gb|ACE93120.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652] Length = 535 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 152/412 (36%), Positives = 230/412 (55%), Gaps = 7/412 (1%) Query: 17 SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76 F + P D+S+ W ++Y+T V +S + + A ++ + R + P + Sbjct: 17 GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIGWWFVRLIWTSPHSVTRYF 76 Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 R D+GY+AL TGL++ A N LARKM + E L+ LLE Q AL E ++ Sbjct: 77 RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 136 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A K E M P TRE + LY E+ R+G +A++YA KA D +P PW +A ++ Sbjct: 137 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 196 Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A W AI L Q+K E NR A+LL AR+ E + G+ + DA+++ Sbjct: 197 YRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEKLE-GNPAGARDDALQA 255 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKL 311 LKL + + A++ AAK+L + RKA ILE+ WK PHPE+ Y S ++T+ +L Sbjct: 256 LKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEVGQTYVRARSGDSTLDRL 315 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 KRA RLE + +VESL++V++ AL+ +A AKA A +I PR+ FLLLA IE+A Sbjct: 316 KRAERLEALRPNNVESLLVVAQAALDAQEFAKARAKAEAAARIEPREAAFLLLADIEEAE 375 Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423 + + ++ +W AL A DP W++ DG++S WLP+SP++ + FEWK P Sbjct: 376 TGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRIDAFEWKAP 426 >gi|209551274|ref|YP_002283191.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537030|gb|ACI56965.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 536 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 238/428 (55%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++RL+ + + L+ F ++ P D+S+ W ++Y+T V S + + A ++ + Sbjct: 2 LIRLVAFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALIAAVMIAWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 62 FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +Y+ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 122 LISLLEAQAALIEGRYDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K + NR A+LL AR+ E Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKADANRLHAVLLTARAGEK 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + DA ++LKL + I A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 242 LE-GNPAGARDDAQQALKLAADFIPAALVAAKALFREGGVRKAASILEQAWKSAPHPEIG 300 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y S ++T+ +LKRA RLE + +VESL++V++ AL+ +A AKA A ++ Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGLRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ L Sbjct: 361 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419 Query: 416 CYFEWKIP 423 FEWK P Sbjct: 420 DAFEWKAP 427 >gi|163757398|ref|ZP_02164487.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43] gi|162284900|gb|EDQ35182.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43] Length = 631 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 142/437 (32%), Positives = 234/437 (53%), Gaps = 13/437 (2%) Query: 4 LIRYFFVISLVIC---SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +IR F ++LV+ F ++ P D+SI W +R S ++++ + A ++ + Sbjct: 2 MIRLLFFVALVLVLGFGFAWLADRPGDLSIVWQDRRIEMSLMTAVTVMVSLVAAVMITWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P ++ D+GY+AL TGL++ A + ARKM+ + E Sbjct: 62 LIRTIWLSPRLVSRYFRANKRDRGYQALSTGLLAAGAGDAMTARKMNKRSRGLLSADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+VQ AL E + + A ++ E + + P TR + LY E+ R G +A YA KA Sbjct: 122 LIHLLDVQTALIEGRNDDARKQFEALAEDPETRLLGLRGLYLEAQRQGATEAAHHYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 +++P PW A + +W A+ L+ +++ A E +R +A+LL AR+ + Sbjct: 182 AELAPHLPWAGAAALSFRTQEGKWDEALRLLDTQRQAGTLEALEADRKKAVLLTARARDR 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D + S DA+ +LK+ A++ A K+L+ + RKA ILE WKVNPHPEIA Sbjct: 242 LD-ADPLRSRDDALAALKVAPGFAPAAVIATKALLRNDNLRKAARILESAWKVNPHPEIA 300 Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + + +LKRA RLE++ + ++ V++ ALE D A KA + ++ Sbjct: 301 DAYVRARIGDTAADRLKRAERLEKLKPLNAQAYDTVARAALEARRFDLARQKAEASARLL 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + I+LLLA IE+A + + ++ +W A+ A DP W + DGY+S W P+SP++ L Sbjct: 361 PCEGIYLLLADIEEAETGDEGRVRHWLSQAVRAPRDPAWTA-DGYVSETWEPVSPVTGKL 419 Query: 416 CYFEWKIPTK---SPEY 429 FEWK+P + P Y Sbjct: 420 DAFEWKVPVEQLSGPRY 436 >gi|222150058|ref|YP_002551015.1| hypothetical protein Avi_4148 [Agrobacterium vitis S4] gi|221737040|gb|ACM38003.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 526 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 149/432 (34%), Positives = 241/432 (55%), Gaps = 15/432 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS----PFVILSILYFFLFAWI 56 M+R+I Y ++ + F ++ P ++ I W +L S +I++I+ + W Sbjct: 1 MIRIIVYILIVLALGFGFSWLADRPGELQIVWQGQLIEMSLTAAATMIVAIVAVVMIGWW 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L+ R + P + R D+GY+A+ TGL++ A N LAR+M + Sbjct: 61 LV----RTLWTSPHSMRRYFRARKRDRGYQAISTGLIAAGAGNAALARRMSARARGLVRA 116 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 E L+ +LE Q AL E +++ A E M+ P TRE + LY E+ R+G +A++Y Sbjct: 117 DQEPLIMVLEAQAALIEGKHDDARRIYEQMVADPETRELGLRGLYVEATRLGAHEAARQY 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232 A KA + +P PW +A ++ W+ AI L+Q++ E +R +A+LL A+ Sbjct: 177 AEKAAEDAPYLPWAAKAALEYRCQTSAWNEAIHLLDQQRVAGVLARAEADRLKAVLLTAK 236 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +++ D GD A+ +A+ +LKL + + AS+ AA++L+ ++ RKA +LE WK+ PH Sbjct: 237 AMDQLD-GDPAAARDNAMNALKLAKDLVPASVTAARALLREDNLRKAGSVLETAWKLAPH 295 Query: 293 PEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P+IA++Y + V +LKRA RLE++ +V SL++V+++ALE +A AKA A Sbjct: 296 PDIASLYVRARGGDGAVDRLKRAERLEQVKPNNVYSLLVVAEMALEARDFTKARAKAEAA 355 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 ++ + +FLLLA IE A + + +I YW AL A DP W++ DG +S WLP SP+ Sbjct: 356 ARMQASERVFLLLADIEDAETGDQARIRYWMAQALKAPRDPSWVA-DGQVSEKWLPYSPV 414 Query: 412 SKTLCYFEWKIP 423 S L FEWKIP Sbjct: 415 SGRLDAFEWKIP 426 >gi|90421076|ref|ZP_01228979.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90334711|gb|EAS48488.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 541 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 133/430 (30%), Positives = 221/430 (51%), Gaps = 8/430 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + V+ F ++ P V+ W + TS V L L +FA +L+ Sbjct: 1 MLRILAFLLVVLAAGIGFAWLADNPGSVTFVWQGQQVGTSLMVFLIGLGVLIFAVLLVVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R F P + + D+GYKAL +G+++ A + LAR+M + E Sbjct: 61 LVRAFFKTPGAIGNWWSTSRRDRGYKALSSGIIAAGAGDAVLARRMTKRSDKLLGTRREP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ L+ Q A+ E + A E M + P TR A+ L+ E+ R+GD ++A+ YA +A Sbjct: 121 LIRFLDAQTAMIEGDHARARSAFEQMERDPETRLLALRGLFLEAERVGDESAARHYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 + I+P PW AV++ LA +W A+ L+ +K + E R RA+LL A+++ Sbjct: 181 VRIAPHVPWAGGAVLESKCLAGDWDGALAILDAQKNTRLVDRDESKRMRAVLLTAKAMTL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +++ D + +E+ KL + A++ AA++L R+ +LE W PHP+IA Sbjct: 241 SER-DPAGAKTAGLEAQKLAPDLPPAALVAAEALFRLGDLRRGSKVLETSWISQPHPDIA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y H ++ +LKRA +L ++ E+ + +++ AL+ G D A AM A Sbjct: 300 EAYVHARPGDSPEDRLKRARKLHGLHS-GAEAEMSLARAALDAGEFDLARKSAMAAADAE 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + ++ W A+ A DP W + DG +S W P+SP++ L Sbjct: 359 PRESTYLLLADIEEAQTGEVGRVREWLGRAIRAPRDPAWTA-DGVVSRNWAPISPVTGRL 417 Query: 416 CYFEWKIPTK 425 FEWK+P + Sbjct: 418 DAFEWKVPVE 427 >gi|218672801|ref|ZP_03522470.1| hypothetical protein RetlG_14767 [Rhizobium etli GR56] Length = 382 Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 132/367 (35%), Positives = 201/367 (54%), Gaps = 6/367 (1%) Query: 17 SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76 F + P D+S+ W ++Y+T V +S + + A ++++ R + P + Sbjct: 17 GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTRYF 76 Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 R D+GY+AL TGL++ A N LARKM + E L+ LLE Q AL E ++ Sbjct: 77 RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 136 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A K E M P TRE + LY E+ R+G +A++YA KA D +P PW +A ++ Sbjct: 137 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 196 Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A W AI L Q+K E NR A+LL AR+ E + G+ + DA+++ Sbjct: 197 YRSQAGRWDDAIRLLEQQKAARVVEKTEANRLHAVLLTARAGEKLE-GNPAGARDDALQA 255 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKL 311 LKL + + A++ AAK+L + RKA ILE+ WK PHPEI Y S ++T+ +L Sbjct: 256 LKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIGQTYVRARSGDSTLDRL 315 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 KRA RLE + +VESL++V++ AL+ +A KA A +I PR+ FLLLA IE+A Sbjct: 316 KRAERLEALRPNNVESLLVVAQAALDAQEFAKARTKAEAAARIEPREAAFLLLADIEEAE 375 Query: 372 SHNTDKI 378 + + ++ Sbjct: 376 TGDQGRV 382 >gi|218662368|ref|ZP_03518298.1| hypothetical conserved membrane protein [Rhizobium etli IE4771] Length = 428 Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 121/311 (38%), Positives = 181/311 (58%), Gaps = 7/311 (2%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 E L+ +++ L E +++ A K E M P TRE + LY E+ R+G +A++YA Sbjct: 11 QEPLINCSRLRVRLMEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYA 70 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARS 233 KA D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ Sbjct: 71 EKAADNAPYLPWAAQATLEYRSQAGNWDDAIRLLEQQKAARVVEKTEANRLHAVLLTARA 130 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 E + G+ + DA+++LKL + A++ AAK+L +N RKA ILE+ WK PHP Sbjct: 131 GERLE-GNPAGARDDALQALKLAAGLVPAALIAAKALFRENGLRKAASILEQAWKSAPHP 189 Query: 294 EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 EI Y S ++T+ +LKRA RLE + +VESL++V++ AL+ +A AKA A Sbjct: 190 EIGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARAKAEAAA 249 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 +I PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ Sbjct: 250 RIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVT 308 Query: 413 KTLCYFEWKIP 423 + FEWK P Sbjct: 309 GRIDAFEWKAP 319 >gi|153008313|ref|YP_001369528.1| HemY domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151560201|gb|ABS13699.1| HemY domain protein [Ochrobactrum anthropi ATCC 49188] Length = 553 Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 131/428 (30%), Positives = 226/428 (52%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ YF V++ + F ++ P ++ +T+ Y ++ + + A ++L+ Sbjct: 1 MLRVLFYFVVVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAMLILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M+ P TR + LY E+ R+G L++A+ YA +A Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGALDAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + A++ Q +W A+ ++ +K+ ++K+ + RA LL A+++ Sbjct: 181 ASQAPQLEWASSAMMGQLCAEGDWDAALKLVDARKQALAHSKDVVKKERAALLTAKAMAV 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D + A+E+ KL + + A++ AA++L S RK ILE WK PHP+IA Sbjct: 241 ADV-DHAQAKALALEANKLTPDLVPAAVVAARALFSDGDMRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ + Sbjct: 300 STYVYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+S W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSPVSPVTGRL 418 Query: 416 CYFEWKIP 423 FEWK+P Sbjct: 419 NSFEWKVP 426 >gi|13473574|ref|NP_105142.1| hypothetical protein mll4218 [Mesorhizobium loti MAFF303099] gi|14024324|dbj|BAB50928.1| mll4218 [Mesorhizobium loti MAFF303099] Length = 531 Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 149/523 (28%), Positives = 260/523 (49%), Gaps = 42/523 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + V+ + F ++ P D+ +T+ Y+ S V + + A ++L+ Sbjct: 1 MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P + R D+GY+AL TG+++ A + LARK ++ E Sbjct: 61 LIRSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E + A +K E ML P R + LY E+ R+GD N+A+ YA +A Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236 ++P W E+ +++ +W A+ ++ +K + NR RA+LL A++ Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D A+ A+E+ KL + A++ AA +L QN RK ILE W+ PHPEIA Sbjct: 241 ADS-DPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +YTH + V +L RA +L+E+ K ES + V++ AL+ A ++A A+++ Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ +LLLA IE+A + + K+ A+ A DP W++ DG +S W P+SP++ L Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418 Query: 416 CYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST- 473 FEW+ P + + I S + ++ + ++++ + + +I+ V++ ++T Sbjct: 419 DAFEWRAPMERLGQLIDSRDEGTTVPV------IEALAKPASEKPIDAIEPVAAGSETTG 472 Query: 474 ---------------------------IHPLDPHIRQPDDPGI 489 + P + R PDDPG+ Sbjct: 473 KGTDRSEDQVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGV 515 >gi|304392696|ref|ZP_07374636.1| HemY domain-containing protein [Ahrensia sp. R2A130] gi|303295326|gb|EFL89686.1| HemY domain-containing protein [Ahrensia sp. R2A130] Length = 674 Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 129/432 (29%), Positives = 218/432 (50%), Gaps = 13/432 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW----GNRLYRTSPFVILSILYFFLFAWI 56 MLRL +F ++ + F + P +++ W G V + +L LFA I Sbjct: 1 MLRLAVFFLILFAIAAGFAWFADNPGTITLQWPWLNGGEPLAVDLLVAIVVLAVVLFAAI 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 +L+++ L+ P R DKGY+AL GL++ A N PLAR++ S+ Sbjct: 61 VLWSIIAAILTSPKTFGRWREGRRRDKGYEALSRGLVAANAGNAPLARRLTKECSKH--L 118 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 +E LV LL+ Q AL E ++ A ML+ TR + LY E+ + G+ +A + Sbjct: 119 DDEPLVALLDAQTALLEDDHDCARRCYTTMLEKDETRLLGLRGLYLEAEKEGEGEAAGHF 178 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232 A +A+ +P PW T+A+++ K W A+ L+ + + +N +A +L A Sbjct: 179 AREAVKANPGTPWATQAMLRSQTATKNWEEALKTLDLNRSAGVYDKDAYNGRKAAILTAL 238 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +++ D A H A+ + KL A++ AA+ + N RKA +LE WK PH Sbjct: 239 AMDEEDASPEKARSH-ALAAHKLAPTLAPAAVVAARMSVRLNDMRKAAKVLETSWKAEPH 297 Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 PEIA+ Y HL + ++V +LKRA L+ S++ + ++++A++ G + A A Sbjct: 298 PEIADAYIHLRNGDSVLDRLKRAQTLDGKRSNSIDGQLAIAQVAIDAGEYETARDALEAA 357 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 +I P + LL+A +E+A + + ++ W A+HA D W++ DG + W+P SP+ Sbjct: 358 FRITPTERACLLMADLEEAQNEDMGRVREWLSRAVHAPRDKAWVA-DGVAAEEWMPASPV 416 Query: 412 SKTLCYFEWKIP 423 + + FEWK P Sbjct: 417 TGEINAFEWKQP 428 >gi|110635528|ref|YP_675736.1| HemY-like [Mesorhizobium sp. BNC1] gi|110286512|gb|ABG64571.1| HemY-like protein [Chelativorans sp. BNC1] Length = 533 Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 129/428 (30%), Positives = 236/428 (55%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + ++ L+ F ++ P ++++T+G Y+ + + +L + A ++L+ Sbjct: 1 MFRILLFLVIVMLLGLGFAWLADRPGELAVTFGGYQYQVTLMMAAVLLVAAIAAVMILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P + R D+GY+AL TGL++ A + LAR+M ++ + E Sbjct: 61 IVRGIWTSPYTVRRYFRARRRDRGYQALSTGLIAAGAGDAGLARRMGQQAAKLISSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+ Q A+ E + A K + M P TR + LY E+ R G+ +A+ YA +A Sbjct: 121 LIHLLDAQAAMLEGNHEAARAKFQAMADDPETRLLGLRGLYLEAERHGEREAARHYADEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLEN 236 I+P W +A ++ +W A+ L+++K ++KE R RA+LL A+++ Sbjct: 181 TKIAPQLGWAADATLEAKADEGDWQGALALLDKQKPSSKEERAALARKRAVLLTAQAMAQ 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + A+ A+E+ +L + + A++ AA++L Q+ R+ +LE +W +PHPE+A Sbjct: 241 LNM-NPAAAKTAALEAHRLQPDFVPAAVTAARALFRQDDLRRGAKVLEAVWAKSPHPEVA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +IY H ++T +L RA +L + + ES++ V++ AL+ G +A A A+++ Sbjct: 300 DIYVHARPGDSTHDRLTRAKKLRRLKPNNAESVLAVARAALDAGEYGEAREAAEAAVRLD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + ++ YW A+ A DP W++ DGY++ W P SP++ L Sbjct: 360 PREGAFLLLADIEEAERGDQGRVRYWLAKAVRAPRDPAWVA-DGYVAERWAPASPVTGRL 418 Query: 416 CYFEWKIP 423 FEW+ P Sbjct: 419 DAFEWRAP 426 >gi|254717951|ref|ZP_05179762.1| hypothetical protein Bru83_00095 [Brucella sp. 83/13] gi|306838961|ref|ZP_07471785.1| HemY domain protein [Brucella sp. NF 2653] gi|306405964|gb|EFM62219.1| HemY domain protein [Brucella sp. NF 2653] Length = 537 Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 127/433 (29%), Positives = 223/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H +E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIAATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|265982894|ref|ZP_06095629.1| HemY domain-containing protein [Brucella sp. 83/13] gi|264661486|gb|EEZ31747.1| HemY domain-containing protein [Brucella sp. 83/13] Length = 539 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 127/433 (29%), Positives = 223/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H +E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 243 LD------THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFP 296 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 297 HPDIAATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 416 VTGRLNSFEWKVP 428 >gi|240851346|ref|YP_002972749.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup] gi|240268469|gb|ACS52057.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup] Length = 519 Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 147/518 (28%), Positives = 255/518 (49%), Gaps = 38/518 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ +F V+++ +T+ + + S +LS+L +LL+ Sbjct: 1 MIRVFIYTFVVCILGLAFAWVANHNGIFVLTFLHFRFSASLLTVLSVLILLFVTLVLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + FF S P+ L + L+KR+ +GY+AL G+++ A + +A+KM + V++ E Sbjct: 61 LLSFFFSLPSALSNYLYKRHKKRGYEALSKGILATFAGDSMVAQKMEAQVAKYLAGKQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV LL+ Q + A E M + +T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LVKLLQAQTLSLQNNSVRAIGLYEGMRKEDSTKLVGLYGLFCEAMKSKAYEAAQQYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233 L +SP W +AV+ + +W +A+ + +K E + +LL ++ Sbjct: 181 LTLSPALLWAHQAVLDRLSTEGKWDKALAIFERAQKALPRSVRATPERQHIQVLLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L D + + +++ KL + + + AA L N+ RKA+ ++ W+ +PHP Sbjct: 241 LSLFDT-HPVQAREAILKAHKLAPDFVPIIVIAADILYKLNETRKADKMIIAAWQKDPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++A +Y E +G+LKRA L NK++ ES +++K AL+ G A +A A++ Sbjct: 300 DLAALYLE-REEGAIGRLKRARTLASYNKDAFESAFLIAKAALDAGETAIAREQAKKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 PR+ ++LLLA IE+A +N + W AL A DP+W+ DG + S W +SPIS Sbjct: 359 YHPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMC-DGSIFSSWSAVSPISG 417 Query: 414 TLCYFEWKIPTKSP----------------EYISSENINFS---LEMAYPADDLQSMLNN 454 L FEWK P P EY++ ++ LE P DD S+L+N Sbjct: 418 RLGGFEWKAPPCMPSLTLEADNIVPKKQDKEYVTGKSDGVEDKKLEKLTPIDD--SLLHN 475 Query: 455 GKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKEQ 492 + ++K E H+ DDPG+K + Sbjct: 476 VQ------VEKQDIKEQDVKMFSQTHL-NVDDPGVKTE 506 >gi|260464236|ref|ZP_05812429.1| HemY domain protein [Mesorhizobium opportunistum WSM2075] gi|259030039|gb|EEW31322.1| HemY domain protein [Mesorhizobium opportunistum WSM2075] Length = 533 Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 135/428 (31%), Positives = 224/428 (52%), Gaps = 7/428 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + V+ + F ++ P D+ IT+ Y+ S V + + A ++ + Sbjct: 1 MIRLLAFLVVVFALGLGFAWLADRPGDMVITFNGYQYQVSLMVAAVAVVAVVAAVMIAWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P + R D+GY+AL TG+++ A + LARK ++ E Sbjct: 61 LVKSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E + A +K E ML P R + LY E+ +GD N+A+ YA +A Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAESLGDRNAARHYAGRA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236 ++P W E+ +++ +W A+ ++ +K + NR RA+LL A++ Sbjct: 181 AVMAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D A+ A+E+ KL + A++ AA +L QN RK ILE WK PHPE+A Sbjct: 241 ADS-DPNAARTAALEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILETAWKAEPHPEVA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +YTH + V +L RA +L+E+ K ES + V++ AL+ A +A A+++ Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAMDFSTARREAEAAIRMD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ +LLLA IE+A + + K+ A+ A DP W++ DG +S W P+SP++ L Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418 Query: 416 CYFEWKIP 423 FEW+ P Sbjct: 419 DAFEWRAP 426 >gi|307942605|ref|ZP_07657953.1| HemY domain-containing protein [Roseibium sp. TrichSKD4] gi|307774244|gb|EFO33457.1| HemY domain-containing protein [Roseibium sp. TrichSKD4] Length = 656 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/430 (27%), Positives = 218/430 (50%), Gaps = 13/430 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ +F ++ V ++ P VSI+W ++ P V+ +L L A++ + Sbjct: 1 MIRVLVFFALLFAVALGAARMADLPGVVSISWDGYVWEQPPVVVAVVLASLLAAFLFVVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R L+ P + +R DKGY++L GL+++ N LAR+ H+ + + F +E Sbjct: 61 VIRVILNSPKIATRFFRQRRKDKGYQSLSQGLIALGTGNAKLARR-HALDADKF-FSDEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q A + A ++ E ML P TR ++ L+ E+ + G+ +A+ YA +A Sbjct: 119 ATKLLLAQTAQLAGKDEEARKRFEDMLADPQTRSLGLHGLFIEAEKQGEPAAARHYAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLI--ARSL 234 + P W AV+ +A +W +A+ L + K + K + R RA++L AR L Sbjct: 179 VKAVPGLEWAGNAVLGYQAVASDWEQALQSLERNYSAKLLDKKSYRRQRAVILTAHARQL 238 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 E+ D ++ +A E+ L N + A+ AA+ + RKA +LE W++ PHPE Sbjct: 239 EDQDPDK---AFANAKEAHGLAQNLVPAATIAARLATRRGDIRKASKMLETTWRLAPHPE 295 Query: 295 IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A+ Y H+ S ++ + +LKR L + + +++ A+E D+A + ++ Sbjct: 296 LADAYAHVRSGDSAIDRLKRVKALAGQRTNTAVGALAIARAAMEAREFDEAREQMKKVLR 355 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 P + F+++A++E+ N ++ W A++A D WI+ DG + + W +SP++ Sbjct: 356 SEPTRGAFMMMAEVEELEHGNRGRMREWLAKAVNAPLDKAWIA-DGVVQAEWAAVSPVTG 414 Query: 414 TLCYFEWKIP 423 L FEW P Sbjct: 415 QLDAFEWATP 424 >gi|114705598|ref|ZP_01438501.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506] gi|114538444|gb|EAU41565.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506] Length = 522 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 125/435 (28%), Positives = 221/435 (50%), Gaps = 17/435 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-----W 55 M ++ +F +I + F ++ P V+ W + S + L+ + A W Sbjct: 1 MWGILTFFILILALYLGFGWLADNPGSVTFVWQEQTVEFSMILFLAAAAAVIVASVLVVW 60 Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115 + V++ F P ++ R + KG+ L G+++ A N LAR+M + Sbjct: 61 L----VAKLF-QAPGLISSWNSSRRHSKGHNYLSRGVLAAGAGNATLARQMIKKSEGRIG 115 Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + ++ L+ Q AL E + A M + P T+ A+ LY E+ R+GD ++ + Sbjct: 116 KDDRAILGFLDAQTALIEGDHQRAVAIFRDMEEDPNTKLLALRGLYLEAKRVGDESAQEY 175 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIA 231 YA +AL I+P+ PW EAV+++ +++W A+ L ++ K+ R RAILL A Sbjct: 176 YAERALRIAPNLPWAAEAVLERKSSSRDWDGALRVLEAQRSIDMLGDKDAKRIRAILLTA 235 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + AD D A+ A + K+ + + A++ AA + N R+A LE W P Sbjct: 236 KAKDQAD-ADPKAARSSARSAQKIAPDFVPAALVAAAAATRLNDSRRATRYLETTWVNAP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HPEIA+ Y H + ++ +L+RA +L+ + ++ ES + V++ AL+ G D A + A+ Sbjct: 295 HPEIADAYVHAKAGDSAKDRLRRAQKLKGLYEKHPESDIAVARAALDAGEHDLARSSALD 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 A + P + ++LLLA IE+ S ++ W A+ A DP+W++ DG + W P+SP Sbjct: 355 AAQKRPTESVYLLLADIEEEQSGEVGRVREWLAKAITAPRDPVWMA-DGVILDEWQPVSP 413 Query: 411 ISKTLCYFEWKIPTK 425 +++ L EWK P + Sbjct: 414 VTRKLGVVEWKSPVE 428 >gi|161619801|ref|YP_001593688.1| HemY domain-containing protein [Brucella canis ATCC 23365] gi|161336612|gb|ABX62917.1| HemY domain protein [Brucella canis ATCC 23365] Length = 523 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 129/433 (29%), Positives = 227/433 (52%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M +Q + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSYQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|260567627|ref|ZP_05838097.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40] gi|260157145|gb|EEW92225.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40] Length = 523 Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 129/433 (29%), Positives = 226/433 (52%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M +Q + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|319780790|ref|YP_004140266.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166678|gb|ADV10216.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 534 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 156/520 (30%), Positives = 257/520 (49%), Gaps = 33/520 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + V+ + F ++ P D+ +T+ Y+ S V + + A ++L+ Sbjct: 1 MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAVVAVVAAVMILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P + R D+GY+AL TG+++ A + LARK ++ E Sbjct: 61 LLKALWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E + A +K E ML P R + LY E+ R+GD N+A+ YA +A Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236 ++P W E+ +++ +W A+ ++ +K + NR RA+LL A++ Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKATRQIERDAANRRRAVLLTAKAQAL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D A+ AIE+ KL + A++ AA +L QN RK ILE WK PHPEIA Sbjct: 241 ADS-DPAAARTAAIEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILEAAWKAEPHPEIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +YTH + V +L RA +L+E+ K ES + V++ AL+ A +A A+++ Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFATARREAEAAIRMD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ +LLLA IE+A + + K+ A+ A DP W++ DG +S W P+SPI+ L Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSRAVRAPRDPAWVA-DGVVSERWAPVSPITGRL 418 Query: 416 CYFEWKIPTKS-PEYISSENINFSL------EMAYPA---------DDLQSMLNNGKK-- 457 FEW+ P + + I S + + +A P DD + GK+ Sbjct: 419 DAFEWRAPMERLGQLIDSHDDAPAGAAPVIEALAKPTSEKRPIEVIDDAGGETSAGKQAE 478 Query: 458 ----NHLPSIKKVS----SFEDSTIHPLDPHIRQPDDPGI 489 +H+ I + + + P + R PDDPG+ Sbjct: 479 SREEDHVRPITAAAFAAVPSDAEGVEPAEELARLPDDPGV 518 >gi|256370285|ref|YP_003107796.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915] gi|256000448|gb|ACU48847.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915] Length = 523 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 129/433 (29%), Positives = 226/433 (52%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P ML L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYMLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|328542000|ref|YP_004302109.1| HemY N-terminal domain protein [polymorphum gilvum SL003B-26A1] gi|326411750|gb|ADZ68813.1| HemY N-terminal domain protein [Polymorphum gilvum SL003B-26A1] Length = 597 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 126/444 (28%), Positives = 217/444 (48%), Gaps = 9/444 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R + +F V+ V F ++ P VS++W ++ P V ++ L +L F Sbjct: 1 MIRALVFFAVLFAVAFGFAWMADLPGVVSVSWQGYVWEQPPVVAAVLIGLALVLVLLAFW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L P + L +R DKGY+AL GL+++ N AR+ + E Sbjct: 61 LVGAILRSPRIARRFLRRRRRDKGYEALSHGLIALGTGNAKRARRYGQDADK--LLRGES 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q A Q++ A ++ E ML+ P TR ++ L+ E+ R + +A+ YA +A Sbjct: 119 AARLLLAQAAQMSGQHDEARQRFEAMLKDPETRALGLHGLFIEAERQNEPIAARHYAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236 P W AV+ +A +W AI L + + + K + R+RA+LL AR+LE Sbjct: 179 ARAVPGLDWAGRAVLGYQAVAGDWEAAIATLERNYAARLVDKKTYRRHRAVLLAARALEL 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D GD + A E+ L + + A++ AA+ + RKA I+E W+++PHP++A Sbjct: 239 ED-GDPETALTLAKEAHGLALDLVPAAVVAARLATRKGDVRKAAKIVEATWRLSPHPDLA 297 Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H + + + +L R L + E + V++ ALE +A + ++ Sbjct: 298 DAYAHARIGDAALDRLARVRTLAAQRAHTAEGALAVARAALEAREFGEAREQLKRVLRSE 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + F+L+A++E+A + ++ W A+ A D W++ DG + W P+SP++ L Sbjct: 358 PTRGAFVLMAELEEAEHGDRGRVREWLARAVRAPLDKAWVA-DGVVREAWAPVSPVTGRL 416 Query: 416 CYFEWKIPTKSPEYISSENINFSL 439 FEW PT PE E ++ +L Sbjct: 417 DAFEWTTPTGLPETPLVEALDDAL 440 >gi|118592001|ref|ZP_01549395.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614] gi|118435297|gb|EAV41944.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614] Length = 669 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 115/437 (26%), Positives = 216/437 (49%), Gaps = 18/437 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW---------GNRLYRTSPFVILSILYFF 51 M+R++ +F ++ V F ++ P + I+W G ++ SP ++ F Sbjct: 1 MIRVLFFFALLFAVALGFAWMADLPGTIQISWPVYENGQQVGTDIWEQSPVIVGLAAAVF 60 Query: 52 LFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111 L ++++ R L P + +R DKGY AL GL+++ N LAR+ + Sbjct: 61 LAVFLVIVWAIRVVLKSPQIASRFFRRRRKDKGYNALSQGLIALGTGNAKLARRY--ALD 118 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 +E LL Q A + + A ++ E ML+ PAT+ ++ L+ E+ R + Sbjct: 119 ADKLLDDEPAAKLLLAQTAQLAGKDDEARQRFEAMLEDPATKALGLHGLFIEAERHKEPV 178 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAI 227 +A+ YA +A SP W +AV+ +A W A+ L + K + K + R RA+ Sbjct: 179 AARHYAEEAAKTSPGLEWAGKAVLGYQAVAHHWDEALKTLERNYAAKMLDKKTYRRQRAV 238 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +L A +++ D G+ +Y A E+ L + + A++ ++ + RKA +LE W Sbjct: 239 ILTALAMKLED-GEPERAYSLAKEAHGLALDLVPAAVLTSRLATRRGDIRKASKVLEATW 297 Query: 288 KVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 ++ PHP++A Y H+ ++ V +LKR L + E + +++ A+E ++A Sbjct: 298 RLFPHPDLAETYAHVRTGDSAVDRLKRVKSLSAQRANTPEGALAIARAAMEAREFEEARQ 357 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406 + ++ P ++ FLL+A++E+A + + + W A+ A D +W++ DG +S+ W Sbjct: 358 QLKKVLQSEPTRQAFLLMAEVEEAENGDRGRTRDWLARAVSAPLDKVWMA-DGIISAEWQ 416 Query: 407 PLSPISKTLCYFEWKIP 423 P+SP++ L F+W P Sbjct: 417 PVSPVTGKLDAFQWATP 433 >gi|225853321|ref|YP_002733554.1| HemY domain-containing protein [Brucella melitensis ATCC 23457] gi|256045493|ref|ZP_05448376.1| hypothetical protein Bmelb1R_13396 [Brucella melitensis bv. 1 str. Rev.1] gi|256112219|ref|ZP_05453140.1| hypothetical protein Bmelb3E_05957 [Brucella melitensis bv. 3 str. Ether] gi|260562802|ref|ZP_05833288.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|225641686|gb|ACO01600.1| HemY domain protein [Brucella melitensis ATCC 23457] gi|260152818|gb|EEW87910.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|326409884|gb|ADZ66949.1| conserved hypothetical protein [Brucella melitensis M28] gi|326539598|gb|ADZ87813.1| HemY domain protein [Brucella melitensis M5-90] Length = 523 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|17986463|ref|NP_539097.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M] gi|265991915|ref|ZP_06104472.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993646|ref|ZP_06106203.1| HemY domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265999298|ref|ZP_05465724.2| HemY domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|17982061|gb|AAL51361.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M] gi|262764627|gb|EEZ10548.1| HemY domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263002981|gb|EEZ15274.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093114|gb|EEZ17249.1| HemY domain-containing protein [Brucella melitensis bv. 2 str. 63/9] Length = 525 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 416 VTGRLNSFEWKVP 428 >gi|261755593|ref|ZP_05999302.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686] gi|261745346|gb|EEY33272.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686] Length = 525 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 243 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 416 VTGRLNSFEWKVP 428 >gi|225628086|ref|ZP_03786121.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261217713|ref|ZP_05931994.1| HemY domain-containing protein [Brucella ceti M13/05/1] gi|261220938|ref|ZP_05935219.1| HemY domain-containing protein [Brucella ceti B1/94] gi|261315072|ref|ZP_05954269.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261316370|ref|ZP_05955567.1| HemY domain-containing protein [Brucella pinnipedialis B2/94] gi|261321440|ref|ZP_05960637.1| HemY domain-containing protein [Brucella ceti M644/93/1] gi|261758825|ref|ZP_06002534.1| HemY domain-containing protein [Brucella sp. F5/99] gi|265987442|ref|ZP_06099999.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265996898|ref|ZP_06109455.1| HemY domain-containing protein [Brucella ceti M490/95/1] gi|225616911|gb|EEH13958.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260919522|gb|EEX86175.1| HemY domain-containing protein [Brucella ceti B1/94] gi|260922802|gb|EEX89370.1| HemY domain-containing protein [Brucella ceti M13/05/1] gi|261294130|gb|EEX97626.1| HemY domain-containing protein [Brucella ceti M644/93/1] gi|261295593|gb|EEX99089.1| HemY domain-containing protein [Brucella pinnipedialis B2/94] gi|261304098|gb|EEY07595.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738809|gb|EEY26805.1| HemY domain-containing protein [Brucella sp. F5/99] gi|262551366|gb|EEZ07356.1| HemY domain-containing protein [Brucella ceti M490/95/1] gi|264659639|gb|EEZ29900.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1] Length = 525 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFP 296 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 416 VTGRLNSFEWKVP 428 >gi|254707585|ref|ZP_05169413.1| hypothetical protein BpinM_11596 [Brucella pinnipedialis M163/99/10] gi|254708877|ref|ZP_05170688.1| hypothetical protein BpinB_01173 [Brucella pinnipedialis B2/94] gi|254713700|ref|ZP_05175511.1| hypothetical protein BcetM6_10155 [Brucella ceti M644/93/1] gi|254715950|ref|ZP_05177761.1| hypothetical protein BcetM_05867 [Brucella ceti M13/05/1] gi|256030403|ref|ZP_05444017.1| hypothetical protein BpinM2_07105 [Brucella pinnipedialis M292/94/1] gi|256158386|ref|ZP_05456284.1| hypothetical protein BcetM4_05995 [Brucella ceti M490/95/1] gi|256253805|ref|ZP_05459341.1| hypothetical protein BcetB_05837 [Brucella ceti B1/94] gi|260169312|ref|ZP_05756123.1| hypothetical protein BruF5_13330 [Brucella sp. F5/99] Length = 523 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|23502736|ref|NP_698863.1| hypothetical protein BR1884 [Brucella suis 1330] gi|254704899|ref|ZP_05166727.1| hypothetical protein Bsuib36_13470 [Brucella suis bv. 3 str. 686] gi|23348752|gb|AAN30778.1| conserved hypothetical protein [Brucella suis 1330] Length = 523 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|237816247|ref|ZP_04595240.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260755565|ref|ZP_05867913.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260758788|ref|ZP_05871136.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260760512|ref|ZP_05872855.1| HemY domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884589|ref|ZP_05896203.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261214836|ref|ZP_05929117.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261323831|ref|ZP_05963028.1| HemY domain-containing protein [Brucella neotomae 5K33] gi|261751032|ref|ZP_05994741.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513] gi|237788314|gb|EEP62529.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260669106|gb|EEX56046.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260670944|gb|EEX57765.1| HemY domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675673|gb|EEX62494.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260874117|gb|EEX81186.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260916443|gb|EEX83304.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261299811|gb|EEY03308.1| HemY domain-containing protein [Brucella neotomae 5K33] gi|261740785|gb|EEY28711.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513] Length = 525 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 416 VTGRLNSFEWKVP 428 >gi|62290741|ref|YP_222534.1| hypothetical protein BruAb1_1861 [Brucella abortus bv. 1 str. 9-941] gi|82700652|ref|YP_415226.1| hypothetical protein BAB1_1884 [Brucella melitensis biovar Abortus 2308] gi|148559352|ref|YP_001259709.1| hypothetical protein BOV_1812 [Brucella ovis ATCC 25840] gi|163843908|ref|YP_001628312.1| HemY domain-containing protein [Brucella suis ATCC 23445] gi|189024954|ref|YP_001935722.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19] gi|254690029|ref|ZP_05153283.1| hypothetical protein Babob68_07641 [Brucella abortus bv. 6 str. 870] gi|254694518|ref|ZP_05156346.1| hypothetical protein Babob3T_07639 [Brucella abortus bv. 3 str. Tulya] gi|254696143|ref|ZP_05157971.1| hypothetical protein Babob28_00127 [Brucella abortus bv. 2 str. 86/8/59] gi|254700528|ref|ZP_05162356.1| hypothetical protein Bsuib55_06701 [Brucella suis bv. 5 str. 513] gi|254731061|ref|ZP_05189639.1| hypothetical protein Babob42_07671 [Brucella abortus bv. 4 str. 292] gi|256059861|ref|ZP_05450048.1| hypothetical protein Bneo5_05852 [Brucella neotomae 5K33] gi|256258283|ref|ZP_05463819.1| hypothetical protein Babob9C_13253 [Brucella abortus bv. 9 str. C68] gi|260546004|ref|ZP_05821744.1| HemY domain-containing protein [Brucella abortus NCTC 8038] gi|297247127|ref|ZP_06930845.1| HemY protein [Brucella abortus bv. 5 str. B3196] gi|62196873|gb|AAX75173.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82616753|emb|CAJ11840.1| unnamed protein product [Brucella melitensis biovar Abortus 2308] gi|148370609|gb|ABQ60588.1| conserved hypothetical protein [Brucella ovis ATCC 25840] gi|163674631|gb|ABY38742.1| HemY domain protein [Brucella suis ATCC 23445] gi|189020526|gb|ACD73248.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19] gi|260096111|gb|EEW79987.1| HemY domain-containing protein [Brucella abortus NCTC 8038] gi|297174296|gb|EFH33643.1| HemY protein [Brucella abortus bv. 5 str. B3196] Length = 523 Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 225/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|306842962|ref|ZP_07475596.1| HemY domain protein [Brucella sp. BO2] gi|306286890|gb|EFM58415.1| HemY domain protein [Brucella sp. BO2] Length = 523 Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 128/433 (29%), Positives = 224/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHAHARAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIAATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|163869275|ref|YP_001610531.1| hypothetical protein Btr_2583 [Bartonella tribocorum CIP 105476] gi|161018978|emb|CAK02536.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 520 Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 139/498 (27%), Positives = 252/498 (50%), Gaps = 18/498 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ +F+ V+++ +T+ + + S +LS+L +LL+ Sbjct: 1 MIRVFIYTFVVCILGLAFVWVANHNGVFVLTFLHFRFSASLLTVLSVLTLLFVTLVLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + FF S P+ L + +KR +GY+AL G+++ A + +A+KM + V++ E Sbjct: 61 LLSFFFSIPSALSNYFYKRQRKRGYEALSKGILATFAGDSMVAQKMEARVAKYLAGKQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV L+ QI + A E M + T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LVKFLKAQILSLQNNSVRAISLYEEMRKEDPTKLVGLYGLFREAMKSKAYEAAQQYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR------AILLIARSL 234 L +SP W +AV+ + +W +A+T + +K R+ +LL++ Sbjct: 181 LTLSPALLWAHQAVLDRLGAEGKWDKALTVFERAQKALPRSVRSTPERQHIQVLLLSGQA 240 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + + + +++ KL + + +I AA L N+ RKA+ ++ W+ PHP+ Sbjct: 241 LHLFETHPVQAREAILKAHKLAPDFVPITIIAADILYKLNETRKADKMIIAAWQKEPHPD 300 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y E +G+LKRA L NK+ ES ++SK AL+ G A +A A++ Sbjct: 301 LGTLYIE-REEGAIGRLKRAKTLASYNKDVFESAFLISKAALDAGETILAREQAQKALQY 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 PR+ ++LLLA IE+A +N + W AL A DP+W+ +G + S W +SPIS Sbjct: 360 HPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMC-EGSIFSSWSAVSPISGR 418 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474 L FEWK P + P ++ E +N + D + ++ + ++K++ +DS + Sbjct: 419 LGCFEWKAPPRLPS-LTLEAVN----IVPKKQDKEDVVEESEGVEDKKLEKLTPIDDSFL 473 Query: 475 HPLDPHIRQPDDPGIKEQ 492 H + + + D IKEQ Sbjct: 474 H--NAQVEKQD---IKEQ 486 >gi|300024948|ref|YP_003757559.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526769|gb|ADJ25238.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 577 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 120/447 (26%), Positives = 223/447 (49%), Gaps = 13/447 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ Y I+L+ ++ P + I W TS F + +L + + + L++ Sbjct: 1 MVRLVVYLVTIALIASGLAWLADRPGTLQIAWQGYDIETSVFRAVVLLAAAVASIVFLWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R + PA + L +R KG A+ +GL++I A + LA + + + + +E Sbjct: 61 VFRALWNSPAAIGGRLVQRRQRKGLDAVSSGLIAIGAGDSTLASRF--ALQARKSLPHEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L +LL Q A A E ML P T + L+ E+ G +A+++A +A Sbjct: 119 LTHLLRAQSAELSGDRATARRIYEAMLASPETELLGLRGLFLEAQHQGADEAARQFADRA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L +P W A+ +Q K+W+ A+ L +KN + +R RA+LL A++ +N Sbjct: 179 LKANPKLGWSATALFEQQCKQKDWTGALETLQHARKNGHIAKADADRKRAVLLTAKA-QN 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ + A+E+ L + + A+ A + L S+ KA +L+K W +PHP++A Sbjct: 238 VEEDSPDRALTLAMEAHALAPDLVPAAAIAGRILASRGNTAKAAKVLQKTWAKSPHPDLA 297 Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMK 353 + Y + + ++T + R +L +N S+ES + V+ A+E D+A + +L + Sbjct: 298 SAYAYARVGDSTRDRFDRERQLAALNPHSIESPIAVATAAIEARMYDEARRVLEPLLPER 357 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 + R + L+A+IE ++ + ++ W A++A DP WI+ DG +S W P SP+ Sbjct: 358 LTQR--VATLMARIEAGDNGDKGRVREWLARAMNAARDPAWIA-DGVISDHWEPTSPVDG 414 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLE 440 L F+W++P ++ + +E + +E Sbjct: 415 RLDAFQWRVPVETRDATRNEILARRIE 441 >gi|306844854|ref|ZP_07477437.1| HemY domain protein [Brucella sp. BO1] gi|306274786|gb|EFM56567.1| HemY domain protein [Brucella sp. BO1] Length = 523 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 127/433 (29%), Positives = 224/433 (51%), Gaps = 17/433 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 241 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 294 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S + +LKRA L + + E + +++ A E G A A Sbjct: 295 HPDIASTYIYARSGDAAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 354 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 355 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 413 Query: 411 ISKTLCYFEWKIP 423 ++ L FEWK+P Sbjct: 414 VTGRLNSFEWKVP 426 >gi|294851122|ref|ZP_06791795.1| HemY protein [Brucella sp. NVSL 07-0026] gi|294819711|gb|EFG36710.1| HemY protein [Brucella sp. NVSL 07-0026] Length = 480 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 128/434 (29%), Positives = 225/434 (51%), Gaps = 17/434 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + K+ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++H A+E+ KL + + A++ AA++L + + RK ILE WK P Sbjct: 243 LD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFP 296 Query: 292 HPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP+IA+ Y + S +T +LKRA L + + E + +++ A E G A A Sbjct: 297 HPDIASTYIYARSGDTAQDRLKRARHLVLLRSNNAEGSLALARAAYEAGEYSVARDNAEQ 356 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP Sbjct: 357 VLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSP 415 Query: 411 ISKTLCYFEWKIPT 424 ++ L FEWK+P Sbjct: 416 VTGRLNSFEWKVPV 429 >gi|121602299|ref|YP_988402.1| hypothetical protein BARBAKC583_0064 [Bartonella bacilliformis KC583] gi|120614476|gb|ABM45077.1| conserved hypothetical protein [Bartonella bacilliformis KC583] Length = 531 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 127/433 (29%), Positives = 217/433 (50%), Gaps = 10/433 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ Y F + ++ F V+++ V IT+ + S +LS+ L L++ Sbjct: 1 MIRVVVYSFAVCVLGALFGWVANHNSIVVITFLQTRFAISLLTLLSVSIVLLVMLALVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P L R KG +AL GL+++ + + A+KM + + ++E Sbjct: 61 LLRGLFFAPNALRRYFSTRRQKKGREALSQGLLAVFSGDYVTAKKMETCALKYLANNHEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL+ Q ++ A E M Q T+ +Y LY E+ + + +AQ YA +A Sbjct: 121 LMKLLQAQTLFLQKDSIRAIGFYEEMRQETPTKLAGLYGLYREAVAMKEDEAAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNR----AILLIARS 233 L +SP W +AV+ + +W +A+ + +K A W R A+LL ++ Sbjct: 181 LALSPALLWAHQAVIDRLSAEGQWDKALDVFEKAQKALPRADRWTAERNYTYALLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L+ K + + +++ KL + + ++ A L N+ RKA+ I+ WK PHP Sbjct: 241 LQ-LFKTHPVKARTAILKAHKLLPDFVPITVITADILYKSNEVRKADKIIFNAWKKEPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ Y E V +LK+A +L N+++ ES +V+K AL+ G ++ A +A A++ Sbjct: 300 DLGACYLK-NEERAVERLKKAKKLASYNEDTFESAFLVAKAALDAGEVEFAREQAQKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 + PR+ ++LLLA IE+A ++ + W AL A DP W+ DG L S W +SPIS Sbjct: 359 LHPRESVYLLLADIEEAQGNDQLLVRQWLSLALRAERDPTWMC-DGTLFSSWSAVSPISG 417 Query: 414 TLCYFEWKIPTKS 426 L FEWK P +S Sbjct: 418 RLGCFEWKAPPRS 430 >gi|254504335|ref|ZP_05116486.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222440406|gb|EEE47085.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 660 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 114/430 (26%), Positives = 214/430 (49%), Gaps = 13/430 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ +F ++ L F ++ P +S++W ++ P V+ ++ L A++++ Sbjct: 11 MIRVLIFFAMLFLAALGFAWMADLPGTISVSWNGYVWEQPPVVVALVVGLVLVAFLVVIG 70 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R L P + +R DKGY AL GL+++ N +AR+ + + E Sbjct: 71 VIRAILKSPQIAGRFFKQRRKDKGYTALSQGLIALGTGNAKMARRYG--LDADKLLNEEP 128 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q A + A ++ E ML P T+ ++ L+ E+ R + +A+ YA +A Sbjct: 129 ATKLLLAQTAQLAGKDGEARQRFEAMLDDPNTKTLGLHGLFVEAERQREPVAARHYAEEA 188 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILL--IARSL 234 + +P W +AV+ +A W A+ L + K + K + R RA++L +A L Sbjct: 189 VKAAPGLEWAGKAVLGYQAVAHHWDEALKTLERNYTSKLLDKKAYRRQRAVILTALAHKL 248 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 E+ D ++ A E+ L + A++ ++ + RKA ++E W+++PHPE Sbjct: 249 ED---NDPDRAFSLAKEAHGLALELVPAAVITSRLATRRGDIRKASKVIEATWRLSPHPE 305 Query: 295 IANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A Y+H+ ++ V +LKRA L + E + ++K ALE ++A + ++ Sbjct: 306 LAETYSHVRTGDSAVDRLKRAKSLAAQRANTAEGAIAIAKAALEAREFEEARTQLKKVLQ 365 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 P + F+L+A++E+ + + ++ W A+ A D WI+ DG +SS W +SP++ Sbjct: 366 SEPTRAAFILMAEVEETETGDKGRVRDWLARAVKASLDKAWIA-DGVVSSEWQAVSPVTG 424 Query: 414 TLCYFEWKIP 423 L F+W P Sbjct: 425 KLDAFQWSSP 434 >gi|299133147|ref|ZP_07026342.1| HemY domain protein [Afipia sp. 1NLS2] gi|298593284|gb|EFI53484.1| HemY domain protein [Afipia sp. 1NLS2] Length = 545 Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 133/527 (25%), Positives = 250/527 (47%), Gaps = 45/527 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ + ++++ V+ V ++W TS V+ + + A IL++ Sbjct: 1 MVRIFSFLILLTVAALGATWVADQSGGVVLSWNGWRAETSLPVLALLALILVIAAILVWT 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R F PA L H++ K A+ GL+++ + LA + H+ +++ H+ Sbjct: 61 IVRAFWKTPARLRRYRHEKREAKARHAITQGLIAVGTGDSSLAHR-HAGTAKRLAEHDP- 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A E A M + R + L+ E+ R DL++A A +A Sbjct: 119 LTLLLQAQTAQLEGDRPGAQHAFHAMAERQDMRLLGLRGLFIEAQRNDDLHTAVAMAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-----KNAKEWNRNRAILLIARSLE 235 L I+P +PW + AV+ +W A+ L+ +NA + R R +LL AR+LE Sbjct: 179 LKIAPSSPWASHAVLGFRCAQSDWDGALALLDSNYSASLIENAP-YRRQRGVLLTARALE 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 ++ D S A+E++K + A++ AAK N+ R+A +E W NPHP++ Sbjct: 238 LEER-DRDLSRKSAMEAIKFAPQLVPAAVLAAKFYSEDNQVRRAMRTIEVAWNANPHPDL 296 Query: 296 ANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A+ Y H+ L ++ +L R L + + ES + +++ A+E +A +A+ + Sbjct: 297 ADAYAHVRLGDSARERLARVELLAQKAPDHRESRLAIARAAIEASEFGRAR-EALAPLLT 355 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 + + LL+A++E+A +H+ + WT A+ A PDP W + DGY+S W P+SP++ Sbjct: 356 TMTQRVALLMAELERAGNHDEGRAREWTARAVRAAPDPAWTA-DGYVSDRWRPVSPVTGR 414 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL------PSIKKV-- 466 L F+W P + ++S++++ + E ++ + L + ++ + P+++K Sbjct: 415 LDAFQWVTPVAA---LTSDHVDVAAEASHLPEKLPEPASVAIESKVAPAEPEPAVEKAPV 471 Query: 467 ----SSFEDSTIHP------------------LDPHIRQPDDPGIKE 491 + + + P + P +R PDDPG+ E Sbjct: 472 EAAPAPVKTDNVAPPVFRARPAGEARSPAPSAIIPLVRAPDDPGVPE 518 >gi|49474780|ref|YP_032822.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse] gi|49240284|emb|CAF26758.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse] Length = 518 Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 144/514 (28%), Positives = 243/514 (47%), Gaps = 32/514 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ Y FV+ ++ +F V+++ + + IT+ + + S +LS+L FL + L+ Sbjct: 1 MTRVLIYTFVVCMLGLAFGWVANHNDVLIITFLHFRFSISLLTLLSVLILFLGILVFLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + S P L + +KR GY+AL G+++ A + A+KM + V + +E Sbjct: 61 LLSVLFSLPGTLSNYFYKRGQKLGYEALSQGVLAAFAGDGVAAKKMEARVVKYLAGKHEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV LL+ Q + A E M + T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LVKLLQAQALSLQNNSARAISLYEEMRKETPTKLAGLYGLFREAMKANAYEAAQQYAQEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233 L +SP W + V+ + W +A+ + +K + E +A+LL ++ Sbjct: 181 LALSPALLWAYQLVLDRLSAQGRWDKALDVFERAQKVLPRSVRSTPERQHVQALLLSGQA 240 Query: 234 L-----ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L D +I H +L + + ++ AA L N+ RKA+ ++ W+ Sbjct: 241 LHLFRTHPTDARKVILKAH------RLVPDFVPITVIAADILYKLNETRKADKMIIAAWQ 294 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 NPHP + +Y E VG+LK+A L +K++ ES +V+K AL+ G A +A Sbjct: 295 KNPHPNLGALYLE-REEGAVGRLKKAKALASYSKDTFESAFLVAKAALDAGERVLAREQA 353 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408 A++ R+ ++LLLA IE+A +N + W AL A DP+W+ DG + S WLP+ Sbjct: 354 QKALQYHRRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWLPV 412 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 SPIS L FEWK P P + L D M N ++ L + + + Sbjct: 413 SPISGRLGRFEWKAPPSPPPLTLETDNTIVLTKKSQEDKNDIMGKNVVEDKL--LNEFPA 470 Query: 469 FEDSTIHPLDPH---IRQP-------DDPGIKEQ 492 ++ +H + RQ DDPGIK + Sbjct: 471 VKNDLLHSAQTNKQGARQSSKTRLNVDDPGIKTE 504 >gi|218515793|ref|ZP_03512633.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3] Length = 364 Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 102/257 (39%), Positives = 154/257 (59%), Gaps = 7/257 (2%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAI 227 +A++YA KA D +P PW +A ++ A W AI L Q+K E NR A+ Sbjct: 1 AARQYAEKAADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAV 60 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LL AR+ E + G+ + DA+++LKL + + A++ AAK+L + RKA ILE+ W Sbjct: 61 LLTARAAEKLE-GNPAGARDDALQALKLAADFVPAALIAAKALFREGGLRKAASILEQAW 119 Query: 288 KVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K PHPE+ Y S ++T+ +LKRA RLE + +VESL++V++ AL+ +A A Sbjct: 120 KSAPHPEVGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARA 179 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406 KA A +I PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WL Sbjct: 180 KAEAAARIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWL 238 Query: 407 PLSPISKTLCYFEWKIP 423 P+SP++ + FEWK P Sbjct: 239 PVSPVTGRIDAFEWKAP 255 >gi|239833008|ref|ZP_04681337.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239825275|gb|EEQ96843.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 480 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 127/443 (28%), Positives = 220/443 (49%), Gaps = 9/443 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++ +T+ Y ++ + + A ++L+ Sbjct: 1 MLRVLFYLVIVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAILILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L R D+GY++L TGL++ A + AR+M Q + E Sbjct: 61 LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGQLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M+ P TR + LY E+ R+G ++A+ YA +A Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGAHDAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKE-WNRNRAILLIARSLEN 236 +P W + AV+ Q+ +W A+ ++ +K+ ++K+ + RA LL A+++ Sbjct: 181 AAQAPQLEWASSAVMGQFCAEGDWDAALKLVDARKQALSHSKDVVKKERAALLTAKAMAV 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D + A+E+ KL + + A++ AA++L S RK ILE WK PHP+IA Sbjct: 241 VDV-DHAQARTLALEANKLAPDLVPAAVVAARALFSDGDIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ + Sbjct: 300 STYVYARSGDTAQDRLKRAKHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+S W P +T Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSPGIAGYRTA 418 Query: 416 CYF--EWKIPTKSPEYISSENIN 436 F E P + E N Sbjct: 419 EQFRVEGSCGGTGPSHRGGEARN 441 >gi|209883479|ref|YP_002287336.1| HemY protein [Oligotropha carboxidovorans OM5] gi|209871675|gb|ACI91471.1| HemY protein [Oligotropha carboxidovorans OM5] Length = 572 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 118/420 (28%), Positives = 210/420 (50%), Gaps = 15/420 (3%) Query: 30 ITWGNRLYRTSPFVILSILYFFLFA-WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKAL 88 ++W TS + ++L L A +++++V R F P L ++ K +A+ Sbjct: 30 LSWSGWRIETS-LPVAALLGVILLAVALVVWSVVRTFWKAPEGLRRRRREKRAAKARRAI 88 Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL+++ + A + H+ ++ + H+ L +L+ Q A E A M + Sbjct: 89 TQGLIAVGTGDS-FAAQRHAGMATRLAAHDP-LALMLQAQTAQLEGDRAGAQRAFRAMAE 146 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 R + L+ E+ R D +A A +AL I+P +PW ++AV+ +W A+ Sbjct: 147 RKDMRLLGLRGLFIEAQRSDDAYTAVAMAEEALKIAPASPWASQAVLGFRCAGSDWDGAL 206 Query: 209 TFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 L+ K + R R +LL AR+L ++ D AS A+E++KL + A++ Sbjct: 207 ALLDTNKAAGLVEPAVYRRERGVLLTARALALEER-DRDASRKSAMEAVKLAPQLVPAAV 265 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKE 323 AAK N+ R+A ++E W NPHP++A+ Y H+ L ++ +L R L + + Sbjct: 266 LAAKFYSEDNQVRRAMRVVEAAWVANPHPDLADAYAHVRLGDSARERLSRVEMLAQKTPD 325 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 E + V++ A++ G ++A +A+ + AP + + LL+A++E+AN H+ + WT Sbjct: 326 HREGRLAVARAAIDAGEFERAR-EALAPLIDAPTQRVALLMAELERAN-HDEGRAREWTA 383 Query: 384 SALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINFSLEM 441 A+ A PDP W + DGY+S W P+SP++ L F+W P +PE + E +L M Sbjct: 384 RAVRAAPDPAWTA-DGYVSDRWRPVSPVTGRLDAFQWVTPVAALAPERATIEAETPTLPM 442 >gi|319409418|emb|CBI83064.1| conserved exported hypothetical protein [Bartonella schoenbuchensis R1] Length = 510 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 126/444 (28%), Positives = 215/444 (48%), Gaps = 16/444 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFL-FAWILLF 59 M+R+ Y FV+ ++ +F V+ + V+IT+ + S LS FL W LL+ Sbjct: 1 MIRVFIYIFVVCVLGAAFGWVASHNSVVTITFMHTRLSISLLAFLSTFIVFLGILWGLLY 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V P ++ + R +G +AL GL++ + A+KM + + + E Sbjct: 61 VVC----FAPGAFYNYFYTRRQRRGREALSQGLLAAFIGDHLTAQKMETRALKYLEENCE 116 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L+ LL+ Q + ++ A E M Q +T+ +Y L+ E+ +AQ YA + Sbjct: 117 PLIKLLQAQTLVLQKDSIRAIHLYEEMRQKKSTKLAGLYGLFREAMDTKTYEAAQHYAQE 176 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIAR 232 A +SP W +AV+ + +W A+ + +K E N A+LL + Sbjct: 177 AFTLSPSLVWAHQAVLDRLSAEGQWDEALDVFEKVQKALPRSARLTAERNHTHALLLSGK 236 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +L + K + + +++ KL + ++ A L N+ RKA+ I+ + WK +PH Sbjct: 237 AL-HVFKIHPVKARSAILKAHKLVPDFGPITVITAGILYKLNETRKADKIIIEAWKKDPH 295 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 P+ +Y E VG+LK+A +L NK + ES +++K AL+ G + A +A A+ Sbjct: 296 PDFGALYLGR-EERAVGRLKKAKKLASYNKNTFESAFLIAKAALDAGELTLAREQAKKAL 354 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 PR+ ++LLLA IE+ ++ + W A +A DP WI D+ SS W +SPIS Sbjct: 355 NYHPRESVYLLLADIEEVQGNDQGLVHQWLSLARNAERDPTWICDNTLFSS-WSAVSPIS 413 Query: 413 KTLCYFEWKIPTKS-PEYISSENI 435 L FEWK P + P + +++I Sbjct: 414 GRLGCFEWKAPPRRFPLTLEADDI 437 >gi|254473094|ref|ZP_05086492.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062] gi|211957815|gb|EEA93017.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062] Length = 613 Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 113/432 (26%), Positives = 209/432 (48%), Gaps = 16/432 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ +F + L+ ++ P V++ W + + S + + A I+++ Sbjct: 1 MVRVLIFFAFVFLLALGGAWMADRPGVVTLEWQGYVVQASLLTTVVAFGASIVASIVVWG 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P ++ H + +R DKGY AL GLM++ + + ARK + + +E Sbjct: 61 FFRLIWKSPTLVSHFMQRRRKDKGYDALSQGLMALGSGDTLHARKF-GLKADKLLDGDEP 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q + + + + + E ML+ + ++ LY E+ R + +A+ +A +A Sbjct: 120 AARLLLAQASQLDGDHAESRRRFEAMLEDDRSMAVGLHGLYIEAERESEPAAARHFAEEA 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLE- 235 ++ P W AV+ ++ +W AI L + + + K R +A+LL AR+LE Sbjct: 180 FNLVPGLRWAGNAVLGYQAVSGDWEEAIATLERNYAARMLDKKTLRRQKAVLLTARALEL 239 Query: 236 ---NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 N D+ +A +E+ L + + A+I AA+ + RKA ILE WK++PH Sbjct: 240 ENENPDRARTLA-----VEAHGLAPSLVPAAIVAARLRTRAGEIRKASKILEATWKLSPH 294 Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++A Y H+ ++V +L R L + S E + ++ A+E D+A + Sbjct: 295 PDLAEAYAHVRPGDSVTDRLSRVRTLASMRAYSSEGAIAIAVAAIEAKKFDEAREQLKRV 354 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 ++ P + FLL+A +E+ + +I W A+ A D +WI+ DG +S+ W P+SP Sbjct: 355 LRSEPTQRAFLLMADLEEREHGDQGRIREWLSRAVRAPHDKVWIA-DGVVSANWAPVSPK 413 Query: 412 SKTLCYFEWKIP 423 + + +EW P Sbjct: 414 TGRVDAYEWATP 425 >gi|49476261|ref|YP_034302.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1] gi|49239069|emb|CAF28372.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1] Length = 517 Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 130/434 (29%), Positives = 220/434 (50%), Gaps = 10/434 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ Y FV+ L +F V++Y + + IT+ + + S LS+L FL LL+ Sbjct: 1 MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + S P +L + +KR GY+AL G +++ A + +A+KM + V + + E Sbjct: 61 LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q + A E M + T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233 +SP W +AV+ + W +A+ Q +K A E +A+LL ++ Sbjct: 181 QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + + + + +++ KL + I ++ AA L N+ RKA+ ++ W+ PHP Sbjct: 241 L-HLLRTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ +Y E VG+LK+A L NK++ ES +++K AL+ G A +A A++ Sbjct: 300 DLGALYLE-REEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 R+ ++LLLA IE+A +N + W AL A DP+W+ DG + S W +SPIS Sbjct: 359 YHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWAVISPISG 417 Query: 414 TLCYFEWKIPTKSP 427 L FEWK P + P Sbjct: 418 RLGCFEWKAPPRMP 431 >gi|319404858|emb|CBI78459.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 514 Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 134/461 (29%), Positives = 213/461 (46%), Gaps = 10/461 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ F ++ + IT+ + S I+S + L + L+ Sbjct: 1 MIRIFIYIFVVCVIGAVFSWGANNNSFLVITFLQMRFTVSLLTIISGIVILLMVLVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ R + G KAL GL++ A + A+KM + E Sbjct: 61 FFRIIFSIPRTLYSFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYFIKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + +T+ +Y L+ E+ + AQ YA +A Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDESTKLAGLYGLFREAMNTKAYDVAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIARSLE 235 LD+SP W + V+ + +W++A+ + ++ R L+ L Sbjct: 181 LDLSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCTSERKYTHALLLSGLA 240 Query: 236 NADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 +A AI ++ KL + + ++ L + RKA+ I+ K W+ NPHP+ Sbjct: 241 LHLTETQLAGARKAILKAHKLMPDFVPITVLMVDILYQLKEVRKADKIIIKAWQENPHPD 300 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y E+ VG+LKRA L NKE ES IV+K AL+ G ++ A A A+ Sbjct: 301 LGALYLR-REESAVGRLKRAKTLAFYNKEIFESAFIVAKAALDAGELELAREYAQKALTY 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 PR+ ++LLLA IE+A N W AL A PDP W D + SS WL +SPIS Sbjct: 360 HPRESVYLLLADIEEAKG-NGQGSRQWLSLALRAEPDPAWACDGSFFSS-WLIVSPISGR 417 Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNN 454 L EWK+P + SP + +N+ E D + ++ N Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKGVIKN 458 >gi|319899462|ref|YP_004159559.1| hypothetical protein BARCL_1326 [Bartonella clarridgeiae 73] gi|319403430|emb|CBI76998.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 514 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 128/443 (28%), Positives = 209/443 (47%), Gaps = 12/443 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ F ++ + IT+ + S I+S L L + L+ Sbjct: 1 MIRIFIYVFVVCVIGAVFSWCANNNSFLVITFLQMRFTVSLLTIVSGLVILLAILVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ + +G KAL GL++ A + A+KM + E Sbjct: 61 FFRIIFSIPRSLYSFFSRHYQKQGGKALTQGLLAAFAGDYMTAQKMEVRALRYLVKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + T+ Y L+ E+ + AQ YA +A Sbjct: 121 LIKLLRAQILFLQKDSMNAIVLYEEMKKEELTKLAGFYGLFREAINTKAYDIAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233 L +SP W + V+ + +W++A+ ++ ++ E A+LL + Sbjct: 181 LALSPTLLWAQQFVLDRLSAEGKWNKALDVFHRAQRALPRSEHCTPERKYIHALLLSGLA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + ++ + +++ KL + + ++ A L + RKA+ I+ K W+ NPHP Sbjct: 241 LHFVET-QLVEARKAILKAHKLMPDFVPITVIMADILYKLKEVRKADKIIIKAWQENPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +Y E+ VG+LKRA +L NK+ ES IV+K AL+ G ++ A A A+ Sbjct: 300 DFGTLYLR-REESAVGRLKRAKKLASYNKDIFESSFIVAKAALDAGELELARECAQKALT 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 PR+ ++LLLA IE+A N W AL A DP W D + SS W +SPIS Sbjct: 359 YHPREGVYLLLADIEEAQG-NDQGSRQWLSLALRAERDPAWACDGSFFSS-WSAVSPISG 416 Query: 414 TLCYFEWKIPTK-SPEYISSENI 435 L FEWK+P + SP + +N+ Sbjct: 417 RLGRFEWKVPPRCSPITLEVDNM 439 >gi|91974947|ref|YP_567606.1| HemY-like [Rhodopseudomonas palustris BisB5] gi|91681403|gb|ABE37705.1| HemY-like [Rhodopseudomonas palustris BisB5] Length = 588 Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 118/432 (27%), Positives = 211/432 (48%), Gaps = 18/432 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSI---LYFFLFAWI 56 MLR+I + +I+L V+ P DV ++W + R P +L + + + AW Sbjct: 1 MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNDWRAEMRLPVFVLGLGAAIVSIVLAWA 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 ++ + R P+ + +R + A+ GL+++ H A + H+ +++H Sbjct: 61 IITGLWR----APSRMKRGRFERRSGRARHAITQGLLAVG-HGDAAAARNHASAARRHAP 115 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 H+ L LL+ Q A E + A M T+ + LY E+ R D A Sbjct: 116 HDP-LALLLQAQSAQLEGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRADDPYGALAI 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIAR 232 A +AL + P++ W ++AV+ +WS A+ T L+ + K + R RA+LL AR Sbjct: 175 AEEALRLQPNSTWASQAVLGFRCARADWSGALDILETNLSSGLVDKKVFRRQRAVLLTAR 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +++ D + +A A+E+ KL I A++ AAK L ++ R+A ++E W+ PH Sbjct: 235 AIDLEDSDESLA-RDSALEANKLAPTLIPAAVLAAKCLAETHQVRRAMKVIEAAWQAQPH 293 Query: 293 PEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++A Y ++ + +L R L N ES + +++ ++ G +A +A+ Sbjct: 294 PDLAAAYANIKPGDPANIRLARVQNLIAKNPADFESALAIARAGIDAGEFSRAR-RALQP 352 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 P + + +L+A+IE +T K WT A+ A+PD +W + DGY S W P+SP+ Sbjct: 353 FIDNPTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDAMWTA-DGYTSDHWRPVSPV 411 Query: 412 SKTLCYFEWKIP 423 + L F+W++P Sbjct: 412 TGRLDAFQWQVP 423 >gi|27375675|ref|NP_767204.1| hypothetical protein bll0564 [Bradyrhizobium japonicum USDA 110] gi|27348813|dbj|BAC45829.1| bll0564 [Bradyrhizobium japonicum USDA 110] Length = 580 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 126/437 (28%), Positives = 215/437 (49%), Gaps = 18/437 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSP-FVILSILYFFLFAWILL 58 MLR++ + +I+L V+ P D+ +T G R T P FV L L F A +L+ Sbjct: 1 MLRIVLFLVLIALAAAGAAWVADQPGDLVLTAGGFRASTTLPRFVFL--LGLFAAAVVLV 58 Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118 +++ P L H++ + +G A+ GL++I + LAR+ H+ +++H N Sbjct: 59 WSILTTIWRTPGRLRRRSHEKRHARGRHAITHGLLAIGHGDTALARR-HAETARRHA-PN 116 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + L LL Q A E + A M + TR + L+ E+ R D A A Sbjct: 117 DPLALLLHAQSAQLEGNRDEAQRAFRAMAEREDTRLLGLRGLFIEAQRADDAVGAVMIAE 176 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSL 234 +A+ +SP + W + AV+ +WS A+ L+ + + R R +LL AR+L Sbjct: 177 EAIKLSPSSTWASHAVLGFRCARGDWSGALAILDSNLSAGLIDKPAYRRQRGVLLTARAL 236 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 E D + +E++KL + A++ AAK ++ R+A ++E W NPHP+ Sbjct: 237 E-LQTMDRDVARESVMEAIKLAPTLVPAAVLAAKFESEAHQVRRAMKLVEAAWLANPHPD 295 Query: 295 IANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAML 350 +A Y H+ L ++ +L+R L + ++ I ++AL +ID + A+A+L Sbjct: 296 LAEAYAHVKLGDSARQRLQRVETL-AAKTPADKAGHIEGQLALARAAIDASEFSRARAVL 354 Query: 351 AMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409 A + P + + LL+A+IE+ + + WT A+ A DP W + DGY+S W P+S Sbjct: 355 APYVNDPTQRVALLMAEIERTEHGDGGRARAWTLRAVRARHDPAWTA-DGYVSDRWRPVS 413 Query: 410 PISKTLCYFEWKIPTKS 426 P++ L F+W+ P S Sbjct: 414 PVTGRLDAFQWQTPVAS 430 >gi|148251900|ref|YP_001236485.1| HemY domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146404073|gb|ABQ32579.1| putative exported protein of unknown function with HemY domain (porphyrin biosynthesis) [Bradyrhizobium sp. BTAi1] Length = 641 Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 116/434 (26%), Positives = 212/434 (48%), Gaps = 16/434 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59 MLR++ + ++ L V+ DV + WG R+ T P +L+ L + A +L++ Sbjct: 1 MLRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRIAMTLPVFVLA-LGLTITACVLVW 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + L P + + R + +G A+ GL++I ++ AR+ H+ +++ ++ Sbjct: 60 NLISALLRAPGRIRNHHRARRHQRGRHAITHGLLAIGHGDLTAARQ-HADAAKR-LAGDD 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A + A M + TR + L+ E+ R D +A A + Sbjct: 118 PLTLLLHAQAAQLGGDRDGAQRAFRAMAERHDTRLLGLRGLFIEAQRADDAYAAVMIADE 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARS-- 233 AL ++P+A W + AV+ +W+ A+ L+ + + R R +LL AR+ Sbjct: 178 ALKLAPNATWASHAVLGFRCAQGDWNGALAILDSNYTAGMIDKPTYRRQRGVLLTARAIA 237 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 LE ++ AS A+E++KL I A++ AAK ++ R+A I+E W PHP Sbjct: 238 LETENRDLARAS---AMEAVKLAPTLIPAAVLAAKFESEAHQVRRAMKIIEAAWTAGPHP 294 Query: 294 EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++A+ Y H+ L ++ +L R L ++ +E + +++ A++ +A A A+ Sbjct: 295 DLADAYAHVRLGDSARQRLTRIENLAARTRDHIEGALAIARAAIDAAEFGRARA-ALAPF 353 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 P + + +L+A++E+ + K WT A+ A DP W + DGY+S W P+SP++ Sbjct: 354 TDDPTQRVAMLMAELERTEHGDAGKSREWTLRAVRARHDPAWTA-DGYVSDHWRPISPVT 412 Query: 413 KTLCYFEWKIPTKS 426 L F+W+ P S Sbjct: 413 GRLDAFQWQTPVAS 426 >gi|319407818|emb|CBI81471.1| conserved exported hypothetical protein [Bartonella sp. 1-1C] Length = 514 Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 133/461 (28%), Positives = 215/461 (46%), Gaps = 10/461 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ F ++ + IT+ + S I+S L L + L+ Sbjct: 1 MIRIFIYIFVVCVIGAIFSWGANNNSFLVITFLQMRFTVSLLTIISGLVILLMVLVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ R + G KAL GL++ A + A+KM + E Sbjct: 61 FFRIIFSIPRTLYRFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYLIKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + T+ +Y L+ E+ + A+ YA +A Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDEPTKLAGLYGLFREAMNTKAYDVAKHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWN--RNRAILLIARSLE 235 L +SP W + V+ + +W++A+ + ++ ++ N RN L+ L Sbjct: 181 LALSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCNSERNYTHALLLSGLA 240 Query: 236 NADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 +A AI ++ KL + + ++ L + RKA+ ++ K W+ NPHP+ Sbjct: 241 LHLTETKLAEARKAILKAHKLMPDFVPITVIMIDILYQLKEVRKADKMIIKAWQENPHPD 300 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y E+ VG+LKRA L NK+ ES IV+K AL+ G ++ A A A+ Sbjct: 301 LGALYLR-REESAVGRLKRAKALASYNKDIFESAFIVAKAALDAGELELAREYAQKALTY 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 PR+ ++LLLA IE+A N W AL A PDP W D + SS WL +SPIS Sbjct: 360 HPRESVYLLLADIEEAQG-NGQGNRQWLSLALRAEPDPAWACDGSFFSS-WLIVSPISGR 417 Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNN 454 L EWK+P + SP + +N+ E D + ++ N Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKEVIKN 458 >gi|39933335|ref|NP_945611.1| HemY-like [Rhodopseudomonas palustris CGA009] gi|39652960|emb|CAE25702.1| unknown protein [Rhodopseudomonas palustris CGA009] Length = 565 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 135/548 (24%), Positives = 247/548 (45%), Gaps = 68/548 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSP---FVILSILYFFLFAWI 56 MLR++ + +I+L V+ P +V ++W + + T P VI + + + AW Sbjct: 1 MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 ++ V R P + R + A+ GL+++ + AR +H+ +++H Sbjct: 61 IILGVVR----APGWMKRGRSSRRSARARNAITQGLLAVGHGDSSTAR-LHANAARRHAP 115 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 H+ L LL+ Q A E A M T+ + LY E+ R D +A Sbjct: 116 HDP-LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAI 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232 A +AL + P+ W ++AV+ +W+ A+ L + + K + R RA+LL AR Sbjct: 175 AEEALRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTAR 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ + ++ D + A+E+ KL + A++ AAK L ++ R+A ++E W+ PH Sbjct: 235 AI-DLEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPH 293 Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAM 349 P++A+ Y +L +T +L R L + +ES + +++ A++ GS +A + Sbjct: 294 PDLASTYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPY 353 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409 L M P + + +L+A+IE + +T K WT A+ A+ DP+W + DGY+S W P+S Sbjct: 354 LDM---PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVS 409 Query: 410 PISKTLCYFEWKIPTKS--------------------------PEYISSENINFSLEMAY 443 P++ L F+W++P + P +SE + ++E A Sbjct: 410 PVTGRLDAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAP 469 Query: 444 PA-----DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQ 483 A + +++ K P+ + P+ P +R Sbjct: 470 EAPIVAPKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRA 529 Query: 484 PDDPGIKE 491 PDDPG+ E Sbjct: 530 PDDPGVDE 537 >gi|188579976|ref|YP_001923421.1| HemY domain protein [Methylobacterium populi BJ001] gi|179343474|gb|ACB78886.1| HemY domain protein [Methylobacterium populi BJ001] Length = 511 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 118/443 (26%), Positives = 218/443 (49%), Gaps = 23/443 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W TS + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGTSLAIALTGVLVAAIILGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + PA + +R +KG +L G++++ + + PLA + H+ + ++ Sbjct: 61 IVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA +A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYAAEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234 ++P W EAV++ EWS A + ++ K+A R RA+LL A + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE Sbjct: 236 QRHEAGEPETATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295 Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +Y +L + ++ +L RA L +++ ES +++++ A E S D A A+ +LA Sbjct: 296 LGKVYLNLRTGDSARDRLARAETLAKLSSWDPESRLVIAQAASE--SKDFARAREVLAPL 353 Query: 354 I--APRKEIFLLLAQIEQANSHNTD--KILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409 + P + ++A+IE A H D + W A A DP W++ DG +S W P+S Sbjct: 354 VDDRPTSRVCRMMARIEAAE-HGADSGRSREWLARAARAPRDPAWVA-DGVVSERWAPVS 411 Query: 410 PISKTLCYFEWKIPTKSPEYISS 432 P++ L F WK P PE ++ Sbjct: 412 PVTGRLDAFVWKTP---PEILAG 431 >gi|86747438|ref|YP_483934.1| HemY-like [Rhodopseudomonas palustris HaA2] gi|86570466|gb|ABD05023.1| HemY-like [Rhodopseudomonas palustris HaA2] Length = 583 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 128/434 (29%), Positives = 214/434 (49%), Gaps = 22/434 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59 MLR+I + +I+L V+ P DV ++W R P IL L + A L++ Sbjct: 1 MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNAWRAEMRLPVFILG-LGGAIVAIGLVW 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 A+ P + H R K +A+ GL+++ H A + H+ +++H H+ Sbjct: 60 AIIAALWRAPKRMKHGRAARRSGKANRAITQGLLAVG-HGDAAAARSHATAARRHAPHDP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + L L E + A M T+ + LY E+ R D +A A + Sbjct: 119 LALLLQAQAAQL-EGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRANDPQAALAIAEE 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIARSLE 235 AL + P+A W ++AV+ +W+ A+ T L+ + K + R RA+LL AR+L+ Sbjct: 178 ALRLQPNAAWASQAVLGFRCARADWTGALEILETNLSSGLVDKKAFRRQRAVLLTARALD 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 D D S A+E+ KL + A++ AAK L ++ R+A +LE W+ PHP++ Sbjct: 238 VEDS-DQSLSRDSALEANKLAPTLVPAAVLAAKCLAETHQVRRAMKVLETAWQAEPHPDL 296 Query: 296 ANIYTHLLSENTVGKLKRALRLEE-INKESV--ESLVIVSKIALEMGSIDQAHAKAMLAM 352 A Y H+ + R R+E I K++ ES + +++ A++ G +KA LA+ Sbjct: 297 AEAYAHIKPGDP--PATRLARIENLIGKKATDFESALALARAAIDAGEF----SKARLAL 350 Query: 353 KI---APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409 + P + + +L+A+IE +T K WT A+ A+PDP+W + DGY+S W P+S Sbjct: 351 QPYLDNPTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDPVWTA-DGYISDHWRPVS 409 Query: 410 PISKTLCYFEWKIP 423 P+S L F+W++P Sbjct: 410 PVSGRLDAFQWQVP 423 >gi|192288690|ref|YP_001989295.1| HemY domain protein [Rhodopseudomonas palustris TIE-1] gi|192282439|gb|ACE98819.1| HemY domain protein [Rhodopseudomonas palustris TIE-1] Length = 565 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 135/548 (24%), Positives = 248/548 (45%), Gaps = 68/548 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSP---FVILSILYFFLFAWI 56 MLR++ + +I+L V+ P +V ++W + + T P VI + + + AW Sbjct: 1 MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 ++ V R P+ + R + A+ GL+++ + AR +H+ +++H Sbjct: 61 IILGVVR----APSWMKRGRSSRRSARARNAITQGLLAVGHGDSGTAR-LHANAARRHAP 115 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 H+ L LL+ Q A E A M T+ + LY E+ R D +A Sbjct: 116 HDP-LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAI 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232 A +AL + P+ W ++AV+ +W+ A+ L + + K + R RA+LL AR Sbjct: 175 AEEALRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTAR 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ + ++ D + A+E+ KL + A++ AAK L ++ R+A ++E W+ PH Sbjct: 235 AI-DLEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPH 293 Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAM 349 P++A+ Y +L +T +L R L + +ES + +++ A++ GS +A + Sbjct: 294 PDLASTYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPY 353 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLS 409 L M P + + +L+A+IE + +T K WT A+ A+ DP+W + DGY+S W P+S Sbjct: 354 LDM---PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVS 409 Query: 410 PISKTLCYFEWKIPTKS--------------------------PEYISSENINFSLEMAY 443 P++ L F+W++P + P +SE + ++E A Sbjct: 410 PVTGRLDAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAP 469 Query: 444 PA-----DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQ 483 A + +++ K P+ + P+ P +R Sbjct: 470 EAPIVAPKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRA 529 Query: 484 PDDPGIKE 491 PDDPG+ E Sbjct: 530 PDDPGVDE 537 >gi|240137308|ref|YP_002961777.1| hypothetical protein MexAM1_META1p0562 [Methylobacterium extorquens AM1] gi|240007274|gb|ACS38500.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens AM1] Length = 511 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 115/455 (25%), Positives = 216/455 (47%), Gaps = 18/455 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + PLA + H+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 ++P W EAV++ EWS A + ++ + R RA+LL A + + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ ++ A++++KL + + A++ A + L +N RKA I+E WK PHPE+A Sbjct: 238 HEAGEPDSATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y +L + ++ +L RA L +++ ES +++++ A E +A Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357 Query: 356 PRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + ++A+IE A + + + W A A DP W++ DG +S W P+SP+S Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416 Query: 415 LCYFEWKIPTKSPEYISSEN-----INFSLEMAYP 444 L F WK P PE ++ + S E A P Sbjct: 417 LDAFVWKTP---PEILAGPEDDDAPVPASAEPAAP 448 >gi|254559413|ref|YP_003066508.1| hypothetical protein METDI0838 [Methylobacterium extorquens DM4] gi|254266691|emb|CAX22471.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens DM4] Length = 511 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 113/440 (25%), Positives = 212/440 (48%), Gaps = 17/440 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWSGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + PLA + H+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234 ++P W EAV++ EWS A + ++ K+A R RA+LL A + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE Sbjct: 236 QRHEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295 Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A +Y +L + ++ +L RA L +++ ES +++++ A E +A Sbjct: 296 LAKVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTD 355 Query: 354 IAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 P + ++A+IE A + + + W A A DP W++ DG +S W P+SP+S Sbjct: 356 DRPTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVS 414 Query: 413 KTLCYFEWKIPTKSPEYISS 432 L F WK P PE ++ Sbjct: 415 GRLDAFVWKTP---PEILAG 431 >gi|163850175|ref|YP_001638218.1| HemY domain-containing protein [Methylobacterium extorquens PA1] gi|163661780|gb|ABY29147.1| HemY domain protein [Methylobacterium extorquens PA1] Length = 511 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 114/446 (25%), Positives = 214/446 (47%), Gaps = 17/446 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + PLA + H+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234 ++P W EAV++ EWS A + ++ K+A R RA+LL A + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE Sbjct: 236 QRHEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295 Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A +Y +L + ++ +L RA L +++ ES +++++ A E +A Sbjct: 296 LAKVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTD 355 Query: 354 IAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 P + ++A+IE A + + + W A A DP W++ DG +S W P+SP+S Sbjct: 356 DRPTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVS 414 Query: 413 KTLCYFEWKIPTKSPEYISSENINFS 438 L F WK P PE ++ + S Sbjct: 415 GRLDAFVWKTP---PEILAGPEDDDS 437 >gi|218528780|ref|YP_002419596.1| HemY domain protein [Methylobacterium chloromethanicum CM4] gi|218521083|gb|ACK81668.1| HemY domain protein [Methylobacterium chloromethanicum CM4] Length = 511 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 113/440 (25%), Positives = 212/440 (48%), Gaps = 17/440 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + PLA + H+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAILLIARSL 234 ++P W EAV++ EWS A + ++ K+A R RA+LL A + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAA--RRQRAVLLTA-AA 235 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE Sbjct: 236 QRHEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPE 295 Query: 295 IANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A +Y +L + ++ +L RA L +++ ES +++++ A E +A Sbjct: 296 LAKVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTD 355 Query: 354 IAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 P + ++A+IE A + + + W A A DP W++ DG +S W P+SP+S Sbjct: 356 DRPTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVS 414 Query: 413 KTLCYFEWKIPTKSPEYISS 432 L F WK P PE ++ Sbjct: 415 GRLDAFVWKTP---PEILAG 431 >gi|319406345|emb|CBI79982.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3] Length = 481 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 132/480 (27%), Positives = 216/480 (45%), Gaps = 20/480 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y F + + F S+ + IT+ + S I+S L L + L+ Sbjct: 1 MIRIFIYIFAVCAIGAVFSWGSNNNNFLVITFLQMRFTVSLLTIISGLVILLTILVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ R + G KAL GL+++ A + A+KM + E Sbjct: 61 FFRIIFSIPGTLYSFFSGRYQEYGRKALIQGLLAVFAGDYIAAQKMEIRALKYLVKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + T+ +Y L+ E+ + AQ YA +A Sbjct: 121 LIKLLRAQILSLQKDSMKAIALYEEMQKEEPTKLAGLYGLFREAINTKAYDVAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENA 237 L +SP W + V+ + +W++A+ ++ ++ ++ + R A Sbjct: 181 LALSPALSWAQQFVLDRLSAEGQWNKALDVFHRAQRALPHSDHYTSERKYTHALLLSGLA 240 Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + ++ + +++ KL + + ++ L + RKA+ ++ K W+ NPHP+ Sbjct: 241 LHLIETQLMEARKAILKAHKLMPDFVPITVIMVDILYRLKEVRKADKMIIKAWQKNPHPD 300 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +Y E+ VG+LKRA L NK+ ES IV+K AL+ G ++ A A A+ Sbjct: 301 FGTLYLR-REESAVGRLKRAKTLASYNKDIFESSFIVAKAALDAGELELAREYAQRALTY 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 PR+ ++LLLA IE+A N W AL A DP W DG W +SPIS Sbjct: 360 HPRESVYLLLADIEEAQG-NGQGSRQWLSLALCAERDPAWAC-DGSFFPFWSAVSPISGR 417 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474 L EWK+P + P I+ E N MA +D + +N K + K SFE ++ Sbjct: 418 LGRCEWKVPPRCPP-ITLEIDN----MALKKEDKKGPVNEKK------VIKDKSFEKKSL 466 >gi|92116186|ref|YP_575915.1| HemY-like [Nitrobacter hamburgensis X14] gi|91799080|gb|ABE61455.1| HemY-like protein [Nitrobacter hamburgensis X14] Length = 552 Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 133/530 (25%), Positives = 240/530 (45%), Gaps = 47/530 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R+I + +I+L V+ + ++W T+ L + A +L+++ Sbjct: 1 MFRIILFLVLIALAALGATWVADQTGTIVMSWDVWRVETTLPAFALGLGLLVVAVLLVWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + +R +G A+ GL++I H A + H+ V+++ H E Sbjct: 61 IVRGLWQAPRRIRRARRERRNRRGRDAITRGLLAIG-HGDAAAARTHARVARRLVSH-EP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A + + A M + TR + L+ E+ R D +A A +A Sbjct: 119 LTLLLHAQSAQLDGDADRAQRAFRAMAERADTRLLGLRGLFIEAQRADDPQAAVAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 L +SP + W ++A + +W+ A+ L++ + + R R +LL AR+LE Sbjct: 179 LKVSPSSIWASQAALGFRCARGDWTGALAILDKNVAAGLIDKALYRRQRGVLLTARALE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +K D AS + +E++K I A + A+K L N+ R+A I+E W PHP++A Sbjct: 238 LEKSDRDASRNTVMEAVKYAPTLIPAVVLASKYLSEGNQMRRAMRIIETAWLAQPHPDLA 297 Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H++ ++ +L R L E ES + +++ A++ +A + + + A Sbjct: 298 DAYAHVMPGDSARERLARVETLAENASGHPESAMAIARAAIDASEFARAR-EVLEPLIAA 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE ++ + WT A+ A+ DP+W + DGY+S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHNEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415 Query: 416 CYFEWK-----IPTKSPEYISSENINFSLEMAYPADDL-------QSMLNNGKKNHLP-- 461 F+W+ +P+ P + +E FS ++A A QS +G + Sbjct: 416 DAFQWQAPLAALPSSRPALVEAE---FSDQIASDAPRFEALPAASQSAARDGDGATVAIE 472 Query: 462 ---------SIKKVSSFEDSTIHPLDPH-----------IRQPDDPGIKE 491 S + +S T LD +R PDDPG+ + Sbjct: 473 SSSPETAAMSAEAATSTTFRTQSDLDKAGASDIPAVIAIVRAPDDPGVDD 522 >gi|217977723|ref|YP_002361870.1| HemY domain protein [Methylocella silvestris BL2] gi|217503099|gb|ACK50508.1| HemY domain protein [Methylocella silvestris BL2] Length = 516 Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 128/451 (28%), Positives = 205/451 (45%), Gaps = 35/451 (7%) Query: 1 MLRLIRYFFV-ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYF------FLF 53 M+R++ + V I L I ++ P ++ + W Y+ V++ I L Sbjct: 1 MIRVLLFLAVLIGLAIAEAWLIER-PGELVLNWQG--YKIETSVLMGIAAVFVAAAILLG 57 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 W+LL RF + P+++ R +KGY AL G++++ A + AR+ + V Q Sbjct: 58 LWMLL----RFIFNIPSLMALASRGRRREKGYAALSRGMIAVGAGDTQAARR--AAVEAQ 111 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 N+ L LL+ Q A + A M + R + L+ E+ R GD+ A Sbjct: 112 RMLPNDPLALLLKAQSAQLSGESGSAEAAFTEMTRRNDMRVLGLRGLHVEAERQGDVEKA 171 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNRNRAI 227 Q YA A +I+P PW +A V A +W A+ L K +E R+RA+ Sbjct: 172 QHYAETAREIAP-LPWAAKANFAHKVAAGDWRGALALLESGAGSKHIDKTIRE--RSRAV 228 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L A ++E AD + A ++K + A AA+ Q RKA ++E W Sbjct: 229 LETAIAIEKAD-AQPAEALALARAAVKRAPTLVPAVALAARLTSEQGDARKAAKLIEAGW 287 Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 HP+IA IY L E++ +LKRA+ L ++ ES ++V++ A+ G A Sbjct: 288 AGTHHPDIAKIYVGLYPGESSADRLKRAISLAQLAPREPESKIMVAEAAIAAGDFKAAR- 346 Query: 347 KAMLAMKIAPRK---EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS 403 +AM + P + + L+A++E+ I W A A PDP W++ DG S Sbjct: 347 EAMQPLIEGPERPTARMCRLMAELEEKQHGAAGYIREWLTRASLAPPDPTWVA-DGVASD 405 Query: 404 VWLPLSPISKTLCYFEWKIPTKSPEYISSEN 434 W P+SP++ L F W+ P E +SS N Sbjct: 406 QWRPISPVTGKLDAFVWQKPV---ERLSSGN 433 >gi|312114938|ref|YP_004012534.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311220067|gb|ADP71435.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 524 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 133/491 (27%), Positives = 225/491 (45%), Gaps = 32/491 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RLI YF +I LV F ++ P +V+I W +TS F+ L L A++++F Sbjct: 1 MTRLIGYFVIIVLVAVGFAWIADRPGNVTIQWLGYDIQTSVFIGSVAL---LLAFVIVFL 57 Query: 61 VSRFFLSC---PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 + L P + +R G +A+ G+ + A + A K + + T Sbjct: 58 LGWLGLLTWTGPKKFRGRMQRRRQRVGQEAVRRGIFAAGAGDKSAALKADAIA--RRTVP 115 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 NE L LL+ Q A + + E ML+ P E + LY E+ + +A+++A Sbjct: 116 NEPLALLLQAQSAQLNEDSIASRQAFERMLEKPEMAELGLRGLYMEAKKANQNEAAKQFA 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AK-EWNRNRAILLIARS 233 +AL +P W + A+ + +W A+ L K++ AK E +R R++LL + Sbjct: 176 ERALAANPALAWSSSALFEIQSREGDWRAALKTLQIAKEHRHLAKPEADRRRSLLLTQLA 235 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 +E D A + A E+ L I A++ A + L +Q + +A IL + W+ HP Sbjct: 236 IELEDSQPSKALAY-ATEAFDLSPTLIPAAVVAGRILTTQGQTSRATKILTQAWRSTQHP 294 Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 EIA + H ++ +L R L +++E V V+ A++ Q A LA+ Sbjct: 295 EIALTFAHARRGDSPRDRLARVKSLVAAGSQTLEGAVAVAVSAIDA----QEWKTARLAL 350 Query: 353 KI----APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408 + P + L+A+IE + ++ + W A PDP+W++ DG +S+ W P+ Sbjct: 351 EPYLANNPPARVCRLMARIEAGQNRDSGRAREWLAKAARGAPDPVWVAPDGTVSAEWQPI 410 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLP-SIKKVS 467 SP + L FEWK P P S+ +F+ E++ A D+ S+ + LP S K Sbjct: 411 SPTTGALGSFEWKTP---PANASANPDDFAAEIS--ALDVVSL----EGESLPDSYAKTK 461 Query: 468 SFEDSTIHPLD 478 + P+D Sbjct: 462 GLSGRSNEPVD 472 >gi|146337456|ref|YP_001202504.1| putative signal peptide;putative HemY porphyrin biosynthesis protein [Bradyrhizobium sp. ORS278] gi|146190262|emb|CAL74256.1| conserved hypothetical protein; putative signal peptide;putative HemY porphyrin biosynthesis protein [Bradyrhizobium sp. ORS278] Length = 644 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 117/436 (26%), Positives = 210/436 (48%), Gaps = 20/436 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59 M R++ + ++ L V+ DV + WG R+ T P +L+ L + A +L++ Sbjct: 1 MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLA-LGLTIAACVLVW 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + L P + +R + +G A+ GL++I H A + H+ ++++ ++ Sbjct: 60 NLLSALLRAPNRIRKAHRERRHRRGRHAITHGLLAIG-HGDSTAARQHADMAKRLA-GDD 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A E + A M + TR + L+ E+ R D +A A + Sbjct: 118 PLTLLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFIEAQRADDAMAAVVIADE 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSL- 234 AL ++P+A W + AV+ +W+ A++ L+ + + R R +LL AR++ Sbjct: 178 ALKLAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMA 237 Query: 235 ---ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 EN D + A+E++KL + A++ AAK ++ R+A I+E W P Sbjct: 238 LETENRD-----LARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCP 292 Query: 292 HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP++A+ Y H+ L ++ V +L R L VE + V++ A++ +A A A+ Sbjct: 293 HPDLADAYAHVRLGDSAVQRLSRITNLAARTPNHVEGALAVARAAIDAAEFGRARA-ALA 351 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 P + + +L+A++E+ + K WT A+ A DP W + DGY+S W P+SP Sbjct: 352 PFTEDPTQRVAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTA-DGYVSDRWRPISP 410 Query: 411 ISKTLCYFEWKIPTKS 426 ++ L F+W+ P S Sbjct: 411 VTGRLDAFQWQTPVAS 426 >gi|316931768|ref|YP_004106750.1| HemY domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315599482|gb|ADU42017.1| HemY domain protein [Rhodopseudomonas palustris DX-1] Length = 565 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 117/435 (26%), Positives = 216/435 (49%), Gaps = 18/435 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPF---VILSILYFFLFAWI 56 MLR++ + +I+L V+ P +V ++W + R T P + + + + AW Sbjct: 1 MLRIVLFLVIIALAAAGAAWVAEQPGEVVLSWNDWRASMTLPVFAAALGAGVVAVMLAWA 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 ++ V R P + R ++ A+ GL+++ H A + H+ +++H Sbjct: 61 IVLGVVR----APGWMKRGRSSRRSERARNAITQGLLAVG-HGDSAAARAHANAARRHAP 115 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 H+ L LL+ Q A E A M T+ + LY E+ R D +A Sbjct: 116 HDP-LALLLQAQSAQLEGDREGARRAFLAMASRKDTKSLGMRGLYIEAQRADDPYAALAI 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIAR 232 A +AL + P+ W ++AV+ +W+ A+ L + + K + R RA+LL AR Sbjct: 175 AEEALRLQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTAR 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ + ++ D + A+E+ KL + A++ AAK L ++ R+A ++E W+ PH Sbjct: 235 AI-DLEESDESLARDSALEANKLAPTLVPAAVLAAKHLAGAHQVRRAMKVIEAAWQAQPH 293 Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 PE+A+ Y +L +T +L R L + +ES V +++ A++ GS +A Sbjct: 294 PELASTYANLKPGDTATARLGRVENLVGKGPQQLESAVAIARAAIDAGSFGRARTALEPY 353 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 +++ P + + +L+A+IE + +T K WT A+ A+ DP+W + DGY+S W P+SP+ Sbjct: 354 LEM-PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPV 411 Query: 412 SKTLCYFEWKIPTKS 426 + L F+W++P + Sbjct: 412 TGRLDAFQWQVPVSA 426 >gi|85713683|ref|ZP_01044673.1| HemY protein [Nitrobacter sp. Nb-311A] gi|85699587|gb|EAQ37454.1| HemY protein [Nitrobacter sp. Nb-311A] Length = 577 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 128/527 (24%), Positives = 243/527 (46%), Gaps = 42/527 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59 MLR+I + +I+L ++ + ++W R+ T P L L + A +L++ Sbjct: 27 MLRIILFLVLIALSALGASWIADQTGTIVLSWDVWRIETTLPVFALG-LGLLVVASLLVW 85 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + R P L R +G A+ GL++I H A + H+ V+++ + Sbjct: 86 SAVRGLWQAPTRLRRARRARRTARGRDAITRGLLAIG-HGDATAARNHARVARR-LVSQD 143 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A + + A M + TR + L+ E+ R GD +A A + Sbjct: 144 PLALLLHAQAAQLDGDADRAQRVFRTMAERADTRLLGLRGLFIEAQRAGDPAAAVAIAEE 203 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235 AL SP + W ++A + +W+ A+ L++ + + + R R +LL AR+LE Sbjct: 204 ALKTSPSSIWASQAALGFRCARGDWAGALAILDRNAASGRIDKALYRRQRGVLLTARALE 263 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + D S +E++K + A + A+K L N+ R+A ++E W PHP++ Sbjct: 264 -LETSDRDLSRQTVMEAVKFAPTLVPAVVLASKYLSEANQMRRAMRMIETAWLAQPHPDL 322 Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A+ Y H++ ++ + +L R +L E ES + +++ AL+ +A A+ + Sbjct: 323 ADAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAALDASEFARAR-DALEPLIA 381 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 AP + + +L+A+IE + ++ + WT A+ A+ DP+W + DGY+S W P+SP++ Sbjct: 382 APTQRVAMLMAEIEHSEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGR 440 Query: 415 LCYFEWK-----IPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL-----PSIK 464 + F+W+ +P+ P + ++ + E + L + G+ P+ Sbjct: 441 VDAFQWQTPLAALPSSRPPLVEADVSDQIAEETPRVEALPAASPGGESKAQDDAMSPADV 500 Query: 465 KVSSF------EDSTIHPLD--------------PHIRQPDDPGIKE 491 + +SF +++ P+ P +R PDDPG+ + Sbjct: 501 EAASFGTIPMPDETAASPISHTEEDKPGAIPDVIPIVRAPDDPGVDD 547 >gi|218679767|ref|ZP_03527664.1| putative transmembrane protein [Rhizobium etli CIAT 894] Length = 280 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 138/266 (51%), Gaps = 16/266 (6%) Query: 47 ILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKM 106 + +F W +V+R+F + R D+GY+AL TGL++ A N LARKM Sbjct: 27 VWWFIRLVWTSPHSVTRYFRA-----------RKRDRGYQALSTGLIAAGAGNALLARKM 75 Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + E L+ LLE Q AL E +++ A K E M P TRE + LY E+ R Sbjct: 76 AARSRGLIRADQEPLINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARR 135 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWN 222 +G +A++YA KA D +P PW +A ++ A W AI L Q+K E N Sbjct: 136 LGANEAARQYAEKAADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEAN 195 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R A+LL AR+ E + G+ + DA+++LKL + I A++ AAK+L + RKA I Sbjct: 196 RLHAVLLTARAGERLE-GNPAGARDDALQALKLAADFIPAALIAAKALFREGGLRKAASI 254 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTV 308 LE+ WK PHPEI Y S ++ Sbjct: 255 LEQAWKSAPHPEIGQAYVRARSGDST 280 >gi|90421577|ref|YP_529947.1| HemY-like [Rhodopseudomonas palustris BisB18] gi|90103591|gb|ABD85628.1| HemY-like [Rhodopseudomonas palustris BisB18] Length = 561 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 132/539 (24%), Positives = 236/539 (43%), Gaps = 57/539 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW----GNRLYRTSPFVILSILYFFLFAWI 56 MLR+I + VI+ ++ P +V ++W + +LS + W Sbjct: 1 MLRIILFLVVIAAAAAGAGWLAEQPGNVVLSWRGWQAEMTLAVAALALLSAIVAVALGWT 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 +L V L P L R + +A+ GL+++ H + H+ +++H Sbjct: 61 ILAGV----LRSPGRLRRSRRARREARARRAITQGLLAVG-HGDAAIARAHANAAKRHAP 115 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + L LL+ Q A + + A M T+ + L+ E+ R D +A Sbjct: 116 QDP-LALLLQAQSAQLDGDRDGAKRAFLAMAGRDDTKSLGMRGLFIEAQRAEDPYAALTI 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIAR 232 A +AL +SP + W ++AV+ +WS A+ T L + K + R R +LL AR Sbjct: 175 AEEALRLSPASSWASQAVLGFRCARGDWSGALEILETNLTSGLIDKKTYRRLRGVLLTAR 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++E ++ D+ S A+E++KL + A++ A+K L ++ R+A +E W +PH Sbjct: 235 AIE-CEETDVSLSRDSALEAVKLAPTLVPAAVLASKYLSEAHQIRRAMKTIETAWLAHPH 293 Query: 293 PEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++A Y H+ ++ +L+R L E V V++ A++ G ++A A++ Sbjct: 294 PDLAEAYAHIKPGDSAQVRLQRVEALAAKASGDTEGAVAVARAAIDAGDFNRARG-ALMP 352 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 AP + + +L+A+IE ++ WT A+ A+ DP+W + DG +S W P+SP+ Sbjct: 353 FVDAPTQRVAMLMAEIEHTERKDSRSARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPV 411 Query: 412 SKTLCYFEWKIP---------------------TKSP-----EYISSENINFSLEMAYP- 444 + L F+W P +SP E ++SE + A P Sbjct: 412 TGRLDAFQWTTPLAELPTNKAVVLESDLFDETLIESPTEEVTEGVTSEPATPEVSKAEPS 471 Query: 445 -----ADDLQSMLNNGKKNHLPSIKKVSSF-------EDSTIHPLDPHIRQPDDPGIKE 491 ++ ++ + P + S + S P+ P +R PDDPGI E Sbjct: 472 KPETSGTPVEVVMESKPAAEAPVVGPTESSPPLFHRPQRSAAAPVIPIVRAPDDPGIDE 530 >gi|158421882|ref|YP_001523174.1| putative HemY protein [Azorhizobium caulinodans ORS 571] gi|158328771|dbj|BAF86256.1| putative HemY protein [Azorhizobium caulinodans ORS 571] Length = 532 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 119/433 (27%), Positives = 205/433 (47%), Gaps = 20/433 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWILLF 59 M+RL+ + V++ + ++ P ++ + W G R+ T P V L+ L F A ++++ Sbjct: 1 MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVP-VALAALAAFSVALLIVW 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + L P M+ +R +KG+ A+ GL++I + + L + E Sbjct: 60 HLGALLLRSPRMIATFSRRRRREKGWAAVSRGLVAIGSGD--LDAARRARAEALRYLPKE 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A A + A ML P TR + L+ E+ R GD+ +A+ A + Sbjct: 118 PLTQLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHMEARRSGDIAAARMLAEE 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235 A + SP W +AV++ +++ A L ++ + ++ R RA+LL A Sbjct: 178 AANQSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAVLLAA-EAL 236 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 ++ D + A+E+++L + A+ A + L + + RKA I+E + PHPE+ Sbjct: 237 ALEQTDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPEL 296 Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAMLA 351 A + HL + + +LKR L + ESL IAL +ID A A+A+L Sbjct: 297 AQVAAHLRPGDAALDRLKRIRTLAAKAPDHAESL-----IALAHATIDANEFAEARALLQ 351 Query: 352 -MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSP 410 + P + + LL+A++E + + K W AL A DP WI+ DG + W P+SP Sbjct: 352 RLSAEPTQRVCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIA-DGRVFDAWAPVSP 410 Query: 411 ISKTLCYFEWKIP 423 ++ L F W +P Sbjct: 411 VTGKLDAFVWAVP 423 >gi|154245109|ref|YP_001416067.1| HemY domain-containing protein [Xanthobacter autotrophicus Py2] gi|154159194|gb|ABS66410.1| HemY domain protein [Xanthobacter autotrophicus Py2] Length = 567 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/409 (25%), Positives = 201/409 (49%), Gaps = 12/409 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ P +V++ W Y T+ V L+++ ++L+ + + P ++ +R Sbjct: 21 LADRPGEVTVVWEGVAYGTTVPVALAVIAVVAGLILILWRILSLLVRSPKIIAAFSRRRR 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 +KG+ A+ GL+++ + R+ ++ +E L +LL Q A + ++ +A Sbjct: 81 REKGWNAVTRGLLAVGIGDNAAVRQARHDAAR--LLPHEPLTHLLTAQAAQLDGKHEVAV 138 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 M+ P TR + L+ E+ + GD +A A +A +P W +AV++ Sbjct: 139 AAFRAMVDKPETRLLGLRGLHMEARKAGDKVAAYAIAEEAASAAPTLGWAADAVIEARCA 198 Query: 201 AKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 A +++ A L + K + ++ R +A+LL A ++ + D + + A+E+++L Sbjct: 199 AGDYAGARGVLERQMALKGIDKAQYRRRKAVLLAAEAI-ALEHSDPLVAREKAVEAVRLA 257 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRAL 315 + A+ CA + L + + RKA ++E + NPHPE+A++ +L + +LKR Sbjct: 258 PTLVPAAACAGRLLGAAGELRKAAKVVETAFATNPHPELADVEAYLRPGDAAQDRLKRIR 317 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHN 374 L ES + +S+ A++ Q A+ +L +A P + + LL+A++E A + Sbjct: 318 TLVNRAPSHRESAIALSRAAIDAHEFRQ--ARLVLEPLLAEPSQRVCLLMAELEAAEHAD 375 Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423 K WT A+ A DP WI+ DG +S W +SP+S L F W++P Sbjct: 376 IGKAREWTARAVRAHRDPAWIA-DGVVSDAWAAVSPVSGKLDAFVWEVP 423 >gi|170742656|ref|YP_001771311.1| HemY domain-containing protein [Methylobacterium sp. 4-46] gi|168196930|gb|ACA18877.1| HemY domain protein [Methylobacterium sp. 4-46] Length = 528 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 110/427 (25%), Positives = 208/427 (48%), Gaps = 13/427 (3%) Query: 19 IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78 + ++ +P VS++WG TS L + L++++R L P + H+ Sbjct: 19 VWLADHPGVVSVSWGGVDVATSLNAALVGVLVLAVVLGFLWSLARGVLRLPRRMRASSHE 78 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 R +G++AL G++++ + + P A + H+ +++ +E L LL Q A Sbjct: 79 RRRTRGFEALSRGMVAVGSGD-PAAARRHAGEAER-LLGSEPLALLLTAQAAQISGDRAG 136 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A M + TR + L+ E+ R GD +A+ YA +A ++P W EAV++ Sbjct: 137 AERAFRRMTEASETRVLGLRGLFVEARRQGDEATARAYAAEASRLAPGVSWANEAVMEAQ 196 Query: 199 VLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++W+ A+ ++++ + R RA+LL A S + + GD + A E+++ Sbjct: 197 CADRDWAGALETVSRRAALGLADKAASRRQRAVLLTA-SAQELEAGDPERALAQAREAVR 255 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKR 313 L + + A++ A + L + + +KA ++E WK PHP++A +Y L +++ +L R Sbjct: 256 LAPDLVPAAVVAGRLLSRRAELKKAARVIEAAWKAGPHPDLARVYLDLRPGDSSRDRLAR 315 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA-NS 372 A L ++ E+ +++ ALE +A + +P + +LL+A+IE+ + Sbjct: 316 AETLARLSSWHPEARFAIARAALEAREFGRARDVLQPLLAESPTQRAYLLMAEIEETEHG 375 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISS 432 + + W A HA DP W + DG +S W P+SP+S L F W+ P PE ++ Sbjct: 376 RGSGRAREWLSRAAHAPRDPAWCA-DGIVSDRWAPISPVSGRLDAFVWQTP---PELLAG 431 Query: 433 ENINFSL 439 + + L Sbjct: 432 RSQDLPL 438 >gi|115522092|ref|YP_779003.1| HemY domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516039|gb|ABJ04023.1| HemY domain protein [Rhodopseudomonas palustris BisA53] Length = 577 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 114/432 (26%), Positives = 204/432 (47%), Gaps = 18/432 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS----PFVILSILYFFLFAWI 56 MLR+I + VI+L ++ P +V ++W S V+ IL L AW Sbjct: 1 MLRIILFLVVIALAATGAAWLAEQPGNVVLSWNGWQAEASLAVFSMVVGGILVSVLLAWA 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 ++ + R P L +R + A+ GL+++ H + H+ +++H+ Sbjct: 61 IITGLWR----SPRRLARSRRERKLARARHAVTQGLLAVG-HGDAAIARAHANAARRHS- 114 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 N+ L LL+ Q A + A M T+ + L+ E+ R D +A Sbjct: 115 PNDPLALLLQAQAAQLDGDREGAKRAFLAMASRDDTKSLGMRGLFIEAQRAEDPYAALTV 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232 A +AL +SP + W AV+ +WS A+ L + K + R R +LL AR Sbjct: 175 AEEALRLSPGSHWAAHAVLGFRCARSDWSGAMDILENNLASGLIDKKTYRRQRGVLLTAR 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++E D D+ + A+E++KL + A++ AAK + ++ R+A I+E W +PH Sbjct: 235 AIECED-ADVSVARDSALEAIKLVPTLVPAAVLAAKYMSEAHQLRRALKIIEAAWIAHPH 293 Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++A Y H+ ++ +L R L +E + +++ A++ +A A+ Sbjct: 294 PDLAEAYAHIKQGDSAQARLSRIETLAAKAPGHIEGALAIARAAIDASDFTRAR-NALAP 352 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 AP + + +L+A+IE A+ +++ WT A+ A+ DP+W + DG +S W P+SP+ Sbjct: 353 YVEAPTQRVAMLMAEIEHADRNDSRAARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPV 411 Query: 412 SKTLCYFEWKIP 423 + L F+W P Sbjct: 412 TGRLDAFQWTSP 423 >gi|220924339|ref|YP_002499641.1| HemY domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219948946|gb|ACL59338.1| HemY domain protein [Methylobacterium nodulans ORS 2060] Length = 507 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 112/415 (26%), Positives = 205/415 (49%), Gaps = 14/415 (3%) Query: 19 IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF--AVSRFFLSCPAMLFHML 76 + ++ +P V++TW Y + + +++ +FA IL F A +R L P L Sbjct: 19 VWLADHPGVVTVTWSG--YEVATSLAAALVGVLIFAVILGFVWAFTRGILRFPHRLRVRN 76 Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 R +GY+AL G++++ + + P A + H+ + + +E L LL+ Q A Sbjct: 77 RARRRARGYEALSRGMVAVGSGD-PAAARRHAGEAAR-LLGDEPLALLLKAQAAQISGDR 134 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A M + P TR + L+ E+ R GD +A+ YA +A ++P W EAV++ Sbjct: 135 AGAENAFRRMTEEPETRVLGLRGLFVEARRQGDEATARAYAAEAARLAPGVSWANEAVLE 194 Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++W+ A+ ++++ + R RA+LL A +LE + GD + A E+ Sbjct: 195 AQCADRDWNNALETVSRRASLGIADKTAARRQRAVLLTASALE-LEAGDPERALAQAREA 253 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKL 311 +KL + + A+ A + + ++A ++E WK +PHP++A +Y L +++ +L Sbjct: 254 VKLAPDLVPAAAVAGRLFARRADLKRAARVVEAAWKASPHPDLARVYLDLRPGDSSRDRL 313 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA- 370 RA L ++ ES +++ ALE +A + P + ++L++A+IE+A Sbjct: 314 ARAETLARLSSWHPESRFAIARAALEAREFGRARDVLSPLLADNPTQRVYLMMAEIEEAE 373 Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK 425 + + + W A HA DP W + DG +S W P+SP+S L F W+ P + Sbjct: 374 HGRGSGRAREWLARAAHAPRDPAWCA-DGIVSDRWAPVSPVSGRLDAFVWQTPPE 427 >gi|75674672|ref|YP_317093.1| HemY protein [Nitrobacter winogradskyi Nb-255] gi|74419542|gb|ABA03741.1| HemY protein [Nitrobacter winogradskyi Nb-255] Length = 555 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 130/532 (24%), Positives = 240/532 (45%), Gaps = 47/532 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLF 59 MLR+I + +I+L ++ + ++W R+ T P L L + A +L + Sbjct: 1 MLRIILFLVLIALSALGATWIADQTGTIVLSWDVWRIETTIPVFALG-LGLLIVASLLAW 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 +V P + +R +G A+ GL++I + A + + + N+ Sbjct: 60 SVVHGLWQAPTRMRRARRERRIARGRDAITRGLLAIGYGDA--AAARNHAKAARRLVSND 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A + + A M + TR + L+ E+ R GD +A A + Sbjct: 118 PLALLLHAQAAQLDGDADRAQRAFRTMAERNDTRLLGLRGLFIEAQRAGDPAAAVAIAEE 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235 AL SP + W ++A + +W+ A+ L++ + + + R R +LL AR+LE Sbjct: 178 ALKTSPSSIWASQAALGFRCARGDWTGALAILDKNVASGRIDKALYRRQRGVLLTARALE 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 +K D S +E++K I A + A+K L N+ R+A ++E W PHP++ Sbjct: 238 -LEKSDRDLSRQTVMEAVKFAPTLIPAVVLASKYLSEANQMRRAMRLIETAWLAQPHPDL 296 Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A+ Y H++ ++ + +L R +L E ES + +++ A++ A A+ +L I Sbjct: 297 ADAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAAIDASEF--ARAREVLEPLI 354 Query: 355 -APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 AP + + +L+A+IE ++ + WT A+ A+ DP+W + DGY+S W P+SP++ Sbjct: 355 AAPTQRVAMLMAEIEHNERGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPLTG 413 Query: 414 TLCYFEWK-----IPTKSPEYISSENIN---------FSLEMAYPADDLQS--------- 450 + F+W+ +P+ P + +E + +L A +D ++ Sbjct: 414 RVDAFQWQTPLSALPSSRPPLVEAEVSDQIAEDAPRVEALPAATSTEDFKAQDGAIPPAG 473 Query: 451 -------MLNNGKKNHLPSIKKVSSFED---STIHPLDPHIRQPDDPGIKEQ 492 ++ + S S ED I + P +R PDDPG+ + Sbjct: 474 VEASSSGTISMPDETATASADYTPSEEDNKPGAIPDVIPIVRAPDDPGVDDD 525 >gi|154251805|ref|YP_001412629.1| HemY domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154155755|gb|ABS62972.1| HemY domain protein [Parvibaculum lavamentivorans DS-1] Length = 512 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 122/445 (27%), Positives = 207/445 (46%), Gaps = 28/445 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR + F +++++ I ++ P D+ + W RTS V + ++ F +L + Sbjct: 1 MLRALYIFLIVAVLSGIAIWLADNPGDLIMHWRGYEIRTSFVVGVGVMALAAFLVLLAYR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F+ PA + L KR KG+ AL G++++AA + A++ Y +Q H + Sbjct: 61 IIVSFIETPASVSAYLEKRRQQKGFLALSRGMVAVAAGDAADAKR---YAAQAHKLLDAP 117 Query: 121 -LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A E A E ML P T + L+ ++ R GD + A +A + Sbjct: 118 PLTLLLAAQAAQLEGNEAAATAYFEQMLAAPETEFLGLRGLFIQARRAGDRDGALAHARR 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLE 235 A ++ P PW +AV + ++W A+ L++ K E R RA+LL AR++ Sbjct: 178 AFNLRPQTPWAAQAVFEIEAAEEDWDAALETLDRVVSAKLIPRDEARRRRAVLLTARAMT 237 Query: 236 NADK--GDMIASYHDAIE-SLKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEK 285 A+ G + A+E + KL ++ A AA+ + RK ++E Sbjct: 238 AAEAAYGQVGEGRTSALEKATKLSLEAVSLEPKFPPAVALAARLCGETGRARKGMKLIED 297 Query: 286 IWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W PHP++A+++ ++ E+ + RA L N + +ES ++V++ A+ G+ D A Sbjct: 298 AWSDAPHPDLADVWLDMIEGESGYDRATRARVLASRNVDHIESRILVARGAI--GARDWA 355 Query: 345 HAKAMLA------MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398 A+ L K P + I L+A+IE+ + W ALHA DP W + Sbjct: 356 AAREALVPYTGAEAKEVPTQCICELMAEIEEGEFGDRGASRSWLTRALHAPADPQW-TGT 414 Query: 399 GYLSSVWLPLSPISKTLCYFEWKIP 423 GY S W P++P++ EW P Sbjct: 415 GYRSPRWSPVNPVTGEFDALEWSAP 439 >gi|170748490|ref|YP_001754750.1| HemY domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170655012|gb|ACB24067.1| HemY domain protein [Methylobacterium radiotolerans JCM 2831] Length = 536 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 106/409 (25%), Positives = 190/409 (46%), Gaps = 10/409 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ P V++ W TS V L + LL+A+ R + P L +R Sbjct: 21 IADRPGTVTVVWNGYQIGTSLAVALVGVIAAAIVLGLLWAIVRGVIGLPEALVRGSAERR 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 KG AL G++++ + + PLA + ++ + E L LL+ Q A + A Sbjct: 81 RAKGLSALSRGMVAVGSGD-PLAARRYAG-DAERLLGTEPLTLLLKAQAAQISGDRDAAE 138 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + M+ P TR + L+ E+ R D +A+ YAT+A ++P W EA+++ Sbjct: 139 SAFQRMVDDPETRVLGLRGLFVEARRREDETAARAYATEAARLAPSVTWANEALLEAQSA 198 Query: 201 AKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 +W+ A+ + ++ + R RA+LL A + E + G+ + ++++KL Sbjct: 199 DGDWAAALETIERRSSLGLIDKAAARRQRAVLLTAIAGER-EAGEPELATERVLQAVKLA 257 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRAL 315 + + A+ A + L + +KA I+E WK NPHP++A +Y L ++V +L RA Sbjct: 258 PDLVPAACIAGRLLARRGDVKKAARIVEAAWKANPHPDLAKVYLGLRPGDSVRDRLARAE 317 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN-SHN 374 L +++ ES + + + AL+ +A + P L++A IE+A Sbjct: 318 VLAKLSVWDPESRLALGQAALDARDYKRAREAVKPLLSDRPTARACLMMAAIEEAEHGAA 377 Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIP 423 + + W A A D +WI+ DG + W P+SP++ L F W+ P Sbjct: 378 SGQAREWLARAARAPRDRVWIA-DGIATDTWAPVSPVTGRLDAFAWREP 425 >gi|296444989|ref|ZP_06886950.1| HemY domain protein [Methylosinus trichosporium OB3b] gi|296257410|gb|EFH04476.1| HemY domain protein [Methylosinus trichosporium OB3b] Length = 466 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/435 (26%), Positives = 191/435 (43%), Gaps = 29/435 (6%) Query: 24 YPEDVSITWGNRLYRTSPFV----ILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 +P +++ WG TS V L ++ + AW +L + F P L R Sbjct: 24 HPGSITLDWGGYHIETSLLVAIAATLGLIALVIIAWAILVS----FFQAPTRLAQSSRSR 79 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 +KG++AL G+++ A ++ A+K + E L +LL+ Q+A E A Sbjct: 80 RREKGFQALSRGIIAAGAGHVGAAKKASKEA--EKCLAKEPLTFLLKAQVAQLEGDRVGA 137 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 M + TR + L+ E+ R D +A +A +A ++P PW A+++ + Sbjct: 138 ETAFHEMTLLSETRLLGLRGLHIEAKRRNDAEAAHLFADQAHQLAP-VPWAGHALLEHHG 196 Query: 200 LAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +W A L K + R RA++ A ++E A H A +++K Sbjct: 197 SNADWEEARVAIEANLKAKAIDLPTAQRLRAVVETALAMEKQVDSPSEA-LHLARQAVKR 255 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRA 314 + A + L KA +LEK + NPHP+I Y SE+ +L R Sbjct: 256 APTLVPAIALIGRLLARHGDSAKALKLLEKAYAENPHPDIVAAYLDASPSESNAERLARV 315 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLLAQIEQA 370 +L ++ ES VIV++ AL + D A A+ LA + AP +I LL+A++E A Sbjct: 316 KKLALAAPKAPESGVIVARAAL--AARDFAMARRALAPLVAEGQAPTAQICLLMAEVEDA 373 Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYI 430 + + + W A DP WI+ DG +S W P SP++ L F W P PE I Sbjct: 374 ENGPSGPVREWLARGSRAPRDPAWIA-DGVISRSWAPASPVTGKLDAFVWTTP---PEPI 429 Query: 431 --SSENINFSLEMAY 443 +E+ + A+ Sbjct: 430 RGPAEDARAGIPAAF 444 >gi|288957242|ref|YP_003447583.1| hypothetical protein AZL_004010 [Azospirillum sp. B510] gi|288909550|dbj|BAI71039.1| hypothetical protein AZL_004010 [Azospirillum sp. B510] Length = 449 Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 116/452 (25%), Positives = 205/452 (45%), Gaps = 12/452 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R + + +++VI I ++ P VS+ W +V L +L L L + Sbjct: 1 MIRALWFLLKLAVVIAIAIWLADRPGSVSVHWLGYAVEAPFWVALLVLLAALGLAALGYR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P L R ++GY+AL G+++IAA + P ARKM + NE Sbjct: 61 LLRGTIRLPQRLRRHSRARRRERGYRALTQGMVAIAAGDAPTARKM---ARKADVLLNEP 117 Query: 121 -LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A + A + ML+ P T + L ++ + GD A A K Sbjct: 118 PLTMLLSAQAAQLQGDERAAKQYFTAMLERPETAFLGMRGLLTQAIKSGDRVEALTLARK 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLE 235 A + P+ PW+ + A +W+ A L Q + +E R+R +LL+ RS E Sbjct: 178 ARGLQPNTPWLLGTLYDLEARAGDWAAAEGTLQQAIQAGAMPTEEGRRHRVVLLLERSFE 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 +G A+ A + L A++ A+ ++ ++ + A ++E+ W+ PHPE+ Sbjct: 238 AERRGRADAALSHAQAAHDLMPGFAPAAVRLARLQVAADRLKPAAKVVERAWRHEPHPEL 297 Query: 296 ANIY-THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A+IY T + S + + +++ +L +S ES + V++ A++ +A AM+I Sbjct: 298 ADIYGTIVASYDALTRVRLFQKLVRQAPDSAESHLAVARAAIDAQLWGEARQHLERAMEI 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISK 413 P + + L+A +++ H+ + W A +A DP+W G +S W L Sbjct: 358 GPTRRTYRLMAALDRGERHDEEVAKDWLAKAANAPEDPVWTCGSCGAVSHNWGGLCGHCG 417 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPA 445 WK PT + + + ++ +L A PA Sbjct: 418 AFDSLSWKAPTVAVPLMEATDLPPAL--ARPA 447 >gi|209965650|ref|YP_002298565.1| HemY domain protein [Rhodospirillum centenum SW] gi|209959116|gb|ACI99752.1| HemY domain protein [Rhodospirillum centenum SW] Length = 472 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 109/438 (24%), Positives = 194/438 (44%), Gaps = 24/438 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + +F I L+I I ++ P VSI + + + + +L L + A ++L+ Sbjct: 1 MRRAVFFFIKIGLLIALAIWLARNPGSVSIQFQDWMVDMPFWAMLLALAVIIVASVVLYR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE- 119 V F + PA ++GY AL G++++AA + A + + + T NE Sbjct: 61 VFSFVVGGPAAFARSRQAAKRERGYHALTQGMVAVAAGDREAASR---FARKADTLLNEP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A A + + MLQ P T + L ++ + GD A + A + Sbjct: 118 PLTLLLSAQAAQLAGDDMAARKYFQSMLQRPETEFLGLRGLLTQALKGGDRTEALKLARR 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLE 235 A +I P A W A+++ W +A L++ K + R+R LL+ R+ Sbjct: 178 AAEIQPKAQWPVLALMELEAKEGHWKQAEEALDRATATKALPQETLRRHRVALLVERART 237 Query: 236 NADKG---DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-ILEKIWKVNP 291 +G D +A A E + + + A++ A +L +Q RKA +E+ WK+ P Sbjct: 238 AVAEGRSKDALALAQRANEQMP---SHVPAAVLVA-TLRAQAGNRKAATRAIEEAWKIAP 293 Query: 292 HPEIANIYTHLLSENTVG-----KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 HPE+A + + + G +KR L ++ + + V + + L DQA Sbjct: 294 HPELAEAWGRIEAIFRPGIDPASLVKRYEALVALDPRAAAAYVALGEACLRADLRDQART 353 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ--SALHAMPDPLWI-SDDGYLSS 403 A +AP + +F LL ++ + + + + W + + LH PDP+W+ S G ++ Sbjct: 354 HLEKAWTLAPTQHVFRLLTELARHEDGDGEAMREWLERSAGLHPDPDPVWVCSACGTPAA 413 Query: 404 VWLPLSPISKTLCYFEWK 421 W + P + EW+ Sbjct: 414 GWSAVCPSCRGFDTMEWR 431 >gi|86136714|ref|ZP_01055292.1| HemY domain protein [Roseobacter sp. MED193] gi|85826038|gb|EAQ46235.1| HemY domain protein [Roseobacter sp. MED193] Length = 503 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 107/450 (23%), Positives = 202/450 (44%), Gaps = 16/450 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +L+++ + +++L+ I+ V IT Y +L++ L WI Sbjct: 5 LLKILVFVALVALIAFGAGILMETAGGVQITVAGTEYTLGALQSVLALGVLVLSVWIFLK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F + K KGY+AL G+M++A+ LA S ++ Sbjct: 65 LLTLLVATLKFLNGDETAMSRYFDKGRERKGYQALSDGMMALASGEGRLALTKASKAAR- 123 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 N L LL Q A + A E + +L TR V + + GD ++A Sbjct: 124 -YLDNPQLTDLLTAQAAEMAGDTHKAAEAYKRLLSDQTTRFVGVRGIMKQKLSEGDKDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229 + A KAL + P V + ++Q A++W+ A L+ K K+ + R A+L Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAQAEDWAGARKTLSAKLKSGSLPRDVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S E AD+ + AIE+ +L + + A+ AA++ + Q KKR A +L+K W+ Sbjct: 243 LSASREVADEAASLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRNAIKVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+++ + E T ++KR +L + + E+ ++++++ + +A Sbjct: 303 QPHPDLAHVFAEVEPEETAPQRVKRFDQLARLKPQDDETRLVMAELHIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 ++ AP + L+A IE+ + W AL A P W+ + ++ + W P Sbjct: 363 GDLVERAPDARVLTLMAAIEKGEGADNAVTQAWLARALTAPRGPQWLCTNCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINF 437 + + W+ P ++PE S+ ++ Sbjct: 423 VCEHCTSFDTLSWQRP-ETPEVASATGVHM 451 >gi|89067497|ref|ZP_01155010.1| HemY domain protein [Oceanicola granulosus HTCC2516] gi|89047066|gb|EAR53120.1| HemY domain protein [Oceanicola granulosus HTCC2516] Length = 495 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 106/409 (25%), Positives = 193/409 (47%), Gaps = 33/409 (8%) Query: 43 VILSILYFFLFAWILLFAVSRFF--LSCPAMLFHMLH-----------KRNYDKGYKALY 89 V L+ L + +L+ A+ FF L + LFH L+ KR +G++AL Sbjct: 41 VTLTTLQLAIAFVVLVLAIWLFFKLLGLLSALFHFLNGDETAVSRYFNKRTERRGFEALS 100 Query: 90 TGLMSIAAHNIPLA----RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 G+M++AA + LA K Y+ + L LL+ Q A +A + ++ Sbjct: 101 EGMMALAAGDGQLALVKAEKADRYLDRPE------LTNLLKAQAAERAGDRRVAEDTYKL 154 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 +LQ TR V L + G+ +A + A +A +SP V+ +++ ++W+ Sbjct: 155 LLQDDRTRFVGVQGLMRQKLEAGETETAMQLAQRAFALSPKNDEVSNTLLRLQAEHEDWA 214 Query: 206 RAITFLNQKKKNA---KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A L + K ++ +R R A+L ++ + E +G A++ +AIE+ +L + I Sbjct: 215 GARQTLGARLKTGAIPRDVHRRRDAVLALSEAREKLLEGKDAAAHEEAIEANRLSPDLIP 274 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEI 320 A+I AA+ I QN R A +L+K W+ PHP++A + + E ++KR L + Sbjct: 275 AAIMAARGYIDQNNGRSAARVLKKAWEAQPHPDLAAAFADIKPDEGPAERIKRFRDLTRV 334 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLA--MKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + E+ +++++ L + + D AK L ++ P + L+A IE+ + + Sbjct: 335 HPDHSETRMLLAE--LHVAAEDFPEAKRALGDLVETDPTARVLTLMAAIERGAGADDTVV 392 Query: 379 LYWTQSALHAMPDPLWISDDGY-LSSVWLPLSPISKTLCYFEWKIPTKS 426 W AL A WI D+ + +++ W P+ P K+ WK P +S Sbjct: 393 RGWLTKALTAPRGDQWICDNCHNVAAHWAPVCPNCKSFDTLAWKRPPQS 441 >gi|126738548|ref|ZP_01754253.1| HemY domain protein [Roseobacter sp. SK209-2-6] gi|126720347|gb|EBA17053.1| HemY domain protein [Roseobacter sp. SK209-2-6] Length = 503 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 109/445 (24%), Positives = 198/445 (44%), Gaps = 16/445 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +L+++ +F +I++ I++ V IT Y S +L++ L W+ Sbjct: 5 LLKVLVFFAIIAVAAFGVIVLGETAGGVQITVAGTEYTLSALQSVLALGVLVLAVWVFFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F + K KGY+AL GLM++A+ LA S ++ Sbjct: 65 VLALLVATLKFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLAMAKASRAARY 124 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A + + +L TR V + + GD ++A Sbjct: 125 --LEKPELTDLLTAQAAEMAGDTGKAADAYKRLLSNQNTRFVGVRGIMKQKLSEGDSDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KAL + P V + ++Q A++W+ A L+ K K + R A+L Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAKAEDWAGARKTLSTKLKTGTLPRDVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S E A + AIE+ +L + + A+ AA++ + Q KKR A IL+K W Sbjct: 243 LSASKEVAADTSSLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRAAIKILKKAWSA 302 Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + +E+ ++KR +L +N ++ E+ ++++++ + +A Sbjct: 303 QPHPDLAHAFAEVEPNESASERVKRFDQLARLNPQNDETRLVMAELLIVAEDFPEARRVL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 ++ AP L+A IE+ I W AL A P W+ ++ ++ + W P Sbjct: 363 GDLVERAPDARSLTLMAAIEKGEGAGDAVIQGWLARALSAPRGPQWLCENCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISS 432 + + WK P ++PE S+ Sbjct: 423 VCEHCTSFDTLSWKRP-ETPELNSA 446 >gi|323135815|ref|ZP_08070898.1| HemY domain protein [Methylocystis sp. ATCC 49242] gi|322398906|gb|EFY01425.1| HemY domain protein [Methylocystis sp. ATCC 49242] Length = 464 Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 24/364 (6%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G + GL+++ A ++ AR + + E L +L Q A + A + Sbjct: 84 GLDVISQGLVAVGAGDL--ARARKAAALAERLLPGEPLTQMLNAQAAQLSGDHQAAAKAF 141 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 M P T+ + L+ E+ R D +A +A A +I+P PW AV++ + + Sbjct: 142 HKMTLKPETKLLGLRGLHIEAKRRQDAEAAHHFAKAAHEIAP-LPWAGSAVLEHHAAGGD 200 Query: 204 WSRAITF----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI----ESLKL 255 W +A L K +A RA++ A ++E + HDA+ ++LK Sbjct: 201 WEKARAAVEANLAAKAIDAATAQNLRAVIETAMAMEKERE-----HPHDALRLARQALKR 255 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRA 314 A+ AA+ LI +++A ++E +W PHP++A +Y L E+ ++ R Sbjct: 256 RPGFPPAAATAARVLIHHGDRKQALKLIETVWATKPHPDLAEVYFEALPDESNSQRVARI 315 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQA 370 +L + ++ ES I+++ AL + D A+ LA +A P LL+A+IE A Sbjct: 316 EKLARLAPDAPESRHILAQAALS--ARDFTKAREALAPLVAAGQHPTAHTCLLMAEIEDA 373 Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYI 430 + + + W A DP WI+D G +S WLP+SP+S L FEWKIP S +++ Sbjct: 374 QNGPSGPVREWLARGSRAPRDPAWIAD-GVVSKHWLPISPVSGKLDAFEWKIPPHSAQHL 432 Query: 431 SSEN 434 + E Sbjct: 433 TEEG 436 >gi|254476677|ref|ZP_05090063.1| HemY domain protein [Ruegeria sp. R11] gi|214030920|gb|EEB71755.1| HemY domain protein [Ruegeria sp. R11] Length = 496 Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 103/436 (23%), Positives = 189/436 (43%), Gaps = 15/436 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-WI--- 56 +L+++ + +++++ +++ V IT Y S + L +FA W+ Sbjct: 5 LLKILVFVAIVAVLAFGASLLTETAGGVQITVAGTEYTLSALQSVIALAVLVFAVWLGFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A RF L K KGY+AL G+M++A+ LA M + Sbjct: 65 VLSLLIATLRFLNGDETALSRYWDKGRERKGYQALSDGMMALASGEGRLA--MAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 +N L LL Q A A E + ++ +TR V + + GD +A Sbjct: 123 KYLNNPELTDLLTAQAAEMAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAILL 229 ++ A KAL + P V + ++ A++W+ A L K K + R A+L Sbjct: 183 RQLAEKALALRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S + G + AIE+ +L + + A+ AA++ +S+ KKR A +L+K W+ Sbjct: 243 LSASKAIVEDGATVEQQEQAIEANRLSPDLVPAAAMAARTYLSRGKKRNAIRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + E+ ++KR ++L + + E+ +I++++ + +A Sbjct: 303 QPHPDLAQAFAEVEPGESAQERVKRFVQLSRLAPQHDETRLIMAELNIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 ++ AP L+A IE+ I W AL A P W+ D ++ + W P Sbjct: 363 GDLVERAPDARALTLMAAIEKGEGAPDAVIQGWLTRALSAPRGPQWVCDKCNHIHADWAP 422 Query: 408 LSPISKTLCYFEWKIP 423 + + W P Sbjct: 423 VCENCASFDTLSWTRP 438 >gi|218507798|ref|ZP_03505676.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5] Length = 240 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 4/224 (1%) Query: 17 SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHML 76 F + P D+S+ W ++Y+T V +S + + A ++++ R + P + Sbjct: 17 GFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTRYF 76 Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 R D+GY+AL TGL++ A N LARKM + E L+ LLE Q AL E ++ Sbjct: 77 RARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRH 136 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A K E M P TRE + LY E+ R+G +A++YA KA D +P PW +A ++ Sbjct: 137 DEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLE 196 Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 A W AI L Q+K E NR A+LL AR+ E Sbjct: 197 YRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 240 >gi|163745151|ref|ZP_02152511.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45] gi|161381969|gb|EDQ06378.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45] Length = 501 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 105/440 (23%), Positives = 193/440 (43%), Gaps = 26/440 (5%) Query: 4 LIRYFFVISLVIC-----SFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWIL 57 LI+ + LV F++ S + +T Y P ++++L W+L Sbjct: 5 LIKIVLFVVLVAALAWGAGFLLESQG--GIQLTVAGTEYTLGPLQSVIAVLLLMFAVWVL 62 Query: 58 LFAVSRF-----FLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNIPLARKMHSYVS 111 L V+ FL+ RN + KGY+AL GLM++A+ +A M Sbjct: 63 LKIVALLSATWHFLNGDETALSRYFDRNRERKGYEALSDGLMALASGEGQVA--MAKAAK 120 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 L LL Q A A +++ TR V + + GD Sbjct: 121 ADRYLKRPALTNLLTAQAAELAGDRRKAERTYRKLVEDEKTRFVGVRGIMKQKLADGDTE 180 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AI 227 +A + A KA + P + +++ +W+ A L K KN ++ ++ R A+ Sbjct: 181 TALKLAEKAFALKPKHEETGDTLLKLQADKHDWTGARQTLQAKYKNGHLPRDVHKRRDAV 240 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L ++ + E +G+ I + AIE+ +L + + A++ AA+S I+Q+K R A +L+K W Sbjct: 241 LALSEAREVIAEGNSIEAREAAIEANRLSPDLVPAAVMAARSYIAQDKPRYASKVLQKAW 300 Query: 288 KVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 V+PHP++A + + + T ++KR L + + E+ +++++ L + + D A Sbjct: 301 SVHPHPDLAAAFAEVQPDETPQQRIKRFRALTKSQPDHPETKMLLAE--LHIANEDFPEA 358 Query: 347 KAMLA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSS 403 + L ++ P L+A IE+ + + W AL+ P WI ++ ++ + Sbjct: 359 RRALGNLVETDPSARSVTLMAAIERGEGASDTVVKGWLTRALNVSRGPQWICENCHHIHA 418 Query: 404 VWLPLSPISKTLCYFEWKIP 423 W P+ K+ EWK P Sbjct: 419 EWKPICENCKSFDTLEWKTP 438 >gi|77462046|ref|YP_351550.1| hypothetical protein RSP_1508 [Rhodobacter sphaeroides 2.4.1] gi|77386464|gb|ABA77649.1| Uncharacterized HemY-like membrane protein [Rhodobacter sphaeroides 2.4.1] Length = 482 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 110/469 (23%), Positives = 199/469 (42%), Gaps = 34/469 (7%) Query: 4 LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 LI+ ++LV+ S E + + G+ P +++ L L W+ L Sbjct: 5 LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109 FAV RF + + KG +AL G+M++AA + A K Y Sbjct: 65 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 124 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + Q + LL Q A A E +++L+ TR V L + GD Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 178 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225 ++A A KA +I+P + +++ +WS A + L+ K K+ + R Sbjct: 179 TDTALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 238 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+L + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298 Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W+ PHP++A + + + T +LKR L I+ + E+ +++++++L + D Sbjct: 299 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 356 Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401 A+ L +A P + ++A +E+ + + W AL A P W D+ + Sbjct: 357 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 416 Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446 + W P+ W+ PT+ +P +E + A PAD Sbjct: 417 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 465 >gi|149912845|ref|ZP_01901379.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b] gi|149813251|gb|EDM73077.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b] Length = 496 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 108/456 (23%), Positives = 198/456 (43%), Gaps = 27/456 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPE---DVSITWGNRLYRTSPFVILSILYFFLFAWILL-- 58 +++ I+LV + + +H E V I +G + + +P + L + A LL Sbjct: 5 ILKIVGFIALVSAATLGAAHLIEMEGGVRIVFGGQEFNLTPIKAVIALIVLVIALWLLLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A +F + K +KG++AL G+M++A+ LA M + Sbjct: 65 LVSLLVATLKFINGDETAISRYFDKNRQEKGFRALSEGMMALASGEGDLA--MSKASKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A + +L+ TR V L + GD +A Sbjct: 123 KYLRKPDLTNLLTAQAAELSGDTRKAELVYKKLLKDDRTRFVGVRGLMRQKLAAGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229 + A A + P V +A+++ +W A LN K K ++ ++ R A+L Sbjct: 183 LKLAKTAFALKPRHGEVQDALLRLQAQTADWKGARETLNAKLKYGSLPRDLHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + D+G I + AIE+ +L + + A++ AA+S ISQ KR A + +K W V Sbjct: 243 LSEAKDVLDEGKDIEAREAAIEANRLSPDLVPAAVLAARSYISQGSKRYATRVTKKAWGV 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +PHP++A + + + T +LKR +L ++ ++ E+ ++ K L + + D A+ Sbjct: 303 HPHPDLAAAFAEIEPDETPAQRLKRFSKLIAMHPDNRETKLL--KAELHLAAEDFPAARR 360 Query: 349 MLA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405 L ++ P + ++A IE+ + + W AL A P W+ D+ ++ + W Sbjct: 361 ALGDLVETDPDARVLTIMAAIERGEGSSDAVVKGWLARALSAPRGPQWVCDNCQHIHAEW 420 Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEM 441 P WK P +S+ + +EM Sbjct: 421 APACDHCNAFDTLTWKTPP-----VSTMTTSTGIEM 451 >gi|298292771|ref|YP_003694710.1| HemY domain protein [Starkeya novella DSM 506] gi|296929282|gb|ADH90091.1| HemY domain protein [Starkeya novella DSM 506] Length = 526 Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 109/431 (25%), Positives = 202/431 (46%), Gaps = 16/431 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS----PFVILSILYFFLFAWI 56 M+RL+ Y V++L+ ++ P ++I W TS +L++L + W Sbjct: 1 MIRLVVYLLVLALIAFGVAWLADRPGSIAIDWQGWQIETSILVAASALLALLAATILLWT 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 LL R P ++ R ++G+ A+ GL+++ + + AR+ + + Sbjct: 61 LL----RLIFRSPELIAFSWRSRRRNRGWAAVTRGLVAVGSGDALGARRAAN--DAERLL 114 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 +E L LL Q A + A M + P+TR + L+ E+ R GD +A Sbjct: 115 GHEPLTRLLAAQAAQLAGDRDGAEAAFRAMSETPSTRLLGLRGLHVEARRRGDAAAALLS 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARS 233 A +A + P W +AV++ L +++ A+ L ++ + +R R +L+A Sbjct: 175 AEEAARVEPGLAWAADAVIEARCLNGDFAGALATLEREAAHGGLERAAHRRRRAVLLAAQ 234 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + + D + A+E+ +L + A+ A + L + RKA I+E + PHP Sbjct: 235 AQALELSDPSTAREKAVEATRLAPTLVPAAEVAGRLLGASGDTRKAAKIIEAAYAATPHP 294 Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++A+ + HL +++ +LKR L ES +++++ A++ D A A+ + Sbjct: 295 DLADAFLHLRPGDSSQERLKRIRTLTARMPSHPESAMVLARAAIDAQEFDVAR-TALGPL 353 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 P + LL+A++E A + K WT A+ A DP W++ DG ++ W P+SP++ Sbjct: 354 LGEPTQRACLLMAELEAAEHGDVGKAREWTARAVRAARDPAWVA-DGVVAERWAPVSPVT 412 Query: 413 KTLCYFEWKIP 423 L FEWK+P Sbjct: 413 GKLDAFEWKLP 423 >gi|126460935|ref|YP_001042049.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126102599|gb|ABN75277.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 482 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 110/469 (23%), Positives = 198/469 (42%), Gaps = 34/469 (7%) Query: 4 LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 LI+ ++LV+ S E + + G+ P +++ L L W+ L Sbjct: 5 LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109 FAV RF + + KG +AL G+M++AA + A K Y Sbjct: 65 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 124 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + Q + LL Q A A E +++L+ TR V L + GD Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 178 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225 +A A KA +I+P + +++ +WS A + L+ K K+ + R Sbjct: 179 TETALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 238 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+L + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298 Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W+ PHP++A + + + T +LKR L I+ + E+ +++++++L + D Sbjct: 299 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 356 Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401 A+ L +A P + ++A +E+ + + W AL A P W D+ + Sbjct: 357 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 416 Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446 + W P+ W+ PT+ +P +E + A PAD Sbjct: 417 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 465 >gi|332559973|ref|ZP_08414295.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332277685|gb|EGJ23000.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 482 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 110/469 (23%), Positives = 198/469 (42%), Gaps = 34/469 (7%) Query: 4 LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 LI+ ++LV+ S E + + G+ P +++ L L W+ L Sbjct: 5 LIKILIFVALVVALTFGASELMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109 FAV RF + + KG +AL G+M++AA + A K Y Sbjct: 65 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 124 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + Q + LL Q A A E +++L+ TR V L + GD Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 178 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225 +A A KA +I+P + +++ +WS A + L+ K K+ + R Sbjct: 179 TETALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 238 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+L + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298 Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W+ PHP++A + + + T +LKR L I+ + E+ +++++++L + D Sbjct: 299 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 356 Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401 A+ L +A P + ++A +E+ + + W AL A P W D+ + Sbjct: 357 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 416 Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446 + W P+ W+ PT+ +P +E + A PAD Sbjct: 417 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 465 >gi|146278943|ref|YP_001169102.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145557184|gb|ABP71797.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 482 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 110/452 (24%), Positives = 190/452 (42%), Gaps = 28/452 (6%) Query: 4 LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF--VILSILYFF---LFAW 55 LI+ ++LV+ S E + + GN P VI ++L F LF Sbjct: 5 LIKILIFVALVVGLTFGASMLMESGGALRLAVGNLELNLGPLQAVIAALLLIFTVWLFLK 64 Query: 56 IL--LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109 I+ LFAV RF + + KG +AL G+M++AA + A K Y Sbjct: 65 IMGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRMAMSRASKARKY 124 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + Q + LL Q A A E +++LQ T+ + L + GD Sbjct: 125 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLQDERTKFVGIRGLLKQKLDEGD 178 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNR 225 +A A KA +I+P + +++ +WS A + L K K+ + R Sbjct: 179 TETALALAQKAFEINPKHSETQDILLKLQADRHDWSGARSTLTAKMKSGALPKAVYKRRD 238 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+L + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K Sbjct: 239 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 298 Query: 286 IWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W+ PHP++A + + +E V +LKR L IN + ES ++ ++++L A Sbjct: 299 AWEAEPHPDLAAAFAEIEPNETPVERLKRFRTLTSINPDHEESRLLTAELSLAAEDFPAA 358 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSS 403 + P + ++A +E+ + + W AL A P W D+ + + Sbjct: 359 RRALGDIVSRHPTQRSLTIMAAVERGEGGDEAVVRGWLARALSAPRGPQWCCDNCQTVHA 418 Query: 404 VWLPLSPISKTLCYFEWKIPTK--SPEYISSE 433 W P+ W+ PT+ +P +E Sbjct: 419 NWAPICDNCGGFDTLSWREPTRKSTPSATGTE 450 >gi|149204332|ref|ZP_01881299.1| HemY domain protein [Roseovarius sp. TM1035] gi|149142217|gb|EDM30264.1| HemY domain protein [Roseovarius sp. TM1035] Length = 490 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 91/391 (23%), Positives = 168/391 (42%), Gaps = 8/391 (2%) Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102 V++ I++ + LL A +F L + DKGY+AL G++++A+ + Sbjct: 54 VLVFIIWLLMKLTGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALASGEGEV 113 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A M + L L+ Q A A E + +L TR V + Sbjct: 114 A--MAQVAKAEKYLRKPALTNLITAQAAEMAGNRRKAEEVYKQLLTNEKTRFVGVRGILR 171 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---K 219 + GD +A + A A + P V + ++ +W A LN K K + Sbjct: 172 QKLAEGDTETALKLAKTAFALKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKYGSLPR 231 Query: 220 EWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + ++ R A+L ++ + + D+G I + AIE+ +L + I A++ AA+ I Q R Sbjct: 232 DVHKRRDAVLALSEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQGNTRN 291 Query: 279 AEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 A ++ K W V PHP++A + + +E+ +LKR +L +++ E+ E+ ++ +++ L Sbjct: 292 ALRVINKAWLVRPHPDLAAAFAAIEPNESPRQRLKRFAKLLKVHPENRETRLLEAELNLA 351 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397 A ++ P ++A IE+ + + W AL A P W+ D Sbjct: 352 AEDFPAARRALGTLAEVEPDARALTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCD 411 Query: 398 D-GYLSSVWLPLSPISKTLCYFEWKIPTKSP 427 ++ + W P + W+ P SP Sbjct: 412 KCQHIHAEWAPACENCNSFDTLSWRAPPNSP 442 >gi|221640998|ref|YP_002527260.1| HemY domain-containing protein [Rhodobacter sphaeroides KD131] gi|221161779|gb|ACM02759.1| HemY domain protein precursor [Rhodobacter sphaeroides KD131] Length = 478 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 109/469 (23%), Positives = 198/469 (42%), Gaps = 34/469 (7%) Query: 4 LIRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 +I+ ++LV+ S E + + G+ P +++ L L W+ L Sbjct: 1 MIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 60 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSY 109 FAV RF + + KG +AL G+M++AA + A K Y Sbjct: 61 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTAMSRAAKARKY 120 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + Q + LL Q A A E +++L+ TR V L + GD Sbjct: 121 LGQN------AMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGD 174 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNR 225 +A A KA +I+P + +++ +WS A + L+ K K+ + R Sbjct: 175 TETALALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRD 234 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+L + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K Sbjct: 235 AVLALQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKK 294 Query: 286 IWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W+ PHP++A + + + T +LKR L I+ + E+ +++++++L + D Sbjct: 295 AWEAEPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSL--AAEDFP 352 Query: 345 HAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYL 401 A+ L +A P + ++A +E+ + + W AL A P W D+ + Sbjct: 353 GARRALGDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTV 412 Query: 402 SSVWLPLSPISKTLCYFEWKIPTK--SPEYISSENINF--SLEMAYPAD 446 + W P+ W+ PT+ +P +E + A PAD Sbjct: 413 HATWAPICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPAD 461 >gi|254510666|ref|ZP_05122733.1| HemY domain protein [Rhodobacteraceae bacterium KLH11] gi|221534377|gb|EEE37365.1| HemY domain protein [Rhodobacteraceae bacterium KLH11] Length = 498 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/450 (22%), Positives = 195/450 (43%), Gaps = 16/450 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF---VILSILYF----FLF 53 +L+++ + +I L+ + V IT Y P + L +L F F Sbjct: 5 LLKILVFVAIIGLLAMGAGFLMESSGGVQITVAGTEYTLGPLQSAIALGVLVFAVWLFFK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F L + +GY+AL GLM++A+ +A M + Sbjct: 65 LLTLLVATLKFLNGDETALSRYFDRSREKRGYQALADGLMALASGEGRVA--MTKANKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L LL Q A A E + ++ +TR V + + GD +A Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKASETYKKLVANNSTRFVGVRGIMKQKLSEGDDETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KAL I P + ++ A++W+ A + LN K K + R A+L Sbjct: 183 LKLAEKALAIKPRHEETQDVLLNLQTRAQDWAGARSTLNSKLKAGYLPRDVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + D+ + AIE+ +L + + A+ AA++ I + K R A IL+K W+ Sbjct: 243 LSEAKDILDETASVEQQEHAIEANRLSPDLVPAAAMAARAYIEKGKPRAAAKILKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + + T ++KR L I+ +++E+ +I++++ + +A Sbjct: 303 QPHPDLAHAFAEAVPDETPEQRIKRFTALTRIHPDNMETRLILAELNIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 ++ + L+A IE+ + + W AL+A P W+ D+ + + + W P Sbjct: 363 GDVVEKQGDARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCDNCHDIQAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINF 437 + + W+ P ++PE S ++ Sbjct: 423 ICQNCGSFDTLSWQTP-QTPEIASVTGVHM 451 >gi|182678175|ref|YP_001832321.1| HemY domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634058|gb|ACB94832.1| HemY domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 493 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 120/482 (24%), Positives = 218/482 (45%), Gaps = 30/482 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + +I+ + + P +TW TS V +++L L Sbjct: 1 MLRVLLFLCLIAALALGAAWIGEQPGHFLMTWQGYQVETSAPVAITLLGVSAAILALALW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L+ P R +KGY AL G+++ A + +A K + + Q + Sbjct: 61 LLVTILNLPKTFARWRETRLKNKGYAALSRGIVAAGAGDTHVANK--AALDAQKYLPKDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV +LE Q A + A + +M + P R + LY E+ R D +A +A +A Sbjct: 119 LVLVLEAQAAQLAGDRSRAQDAFRLMGERPEMRLLGLRGLYAEALRNDDSEAAYHFAHEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----EWNRNRAILLIARSLE 235 + P PW +AV+ +++ A++W A L K+ NA+ R AIL A + E Sbjct: 179 HKVHP-LPWSAKAVLDEHIRAQDWEGAFGILG-KQINAQLVDKATGERQCAILETAMAQE 236 Query: 236 NADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++ +A+ ++LK + + A + A +N R+A ++E+ W Sbjct: 237 KE-----LSAPDEALRLGRQALKHAPDLVPAIVLVAHLWGRKNDVRRAAKLIEREWPNIQ 291 Query: 292 HPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSK--IALEMGSIDQAHAKA 348 HP+IA Y L ++ + +L+RA RL + S ES + V+ IA ++ + + Sbjct: 292 HPDIALAYLDLRPGDSNMDRLRRAQRLARLAPGSAESRLSVAGAAIAARQFALARETMRE 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408 +LA + P + L+A++E+ S + + W A A D W++D G++S WLP Sbjct: 352 LLAKEKTPTVRMCQLMAELEETESGFSGSVREWLAKASRAPRDETWVAD-GFVSPKWLPA 410 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 SP++ L F W+ P E + +L+ A ++ +L+ +K+ + KK + Sbjct: 411 SPVTGQLDAFRWQRPV--------ERLVVTLDNAEAVEETALLLSEEEKHGADTSKKAAV 462 Query: 469 FE 470 E Sbjct: 463 QE 464 >gi|83950381|ref|ZP_00959114.1| HemY domain protein [Roseovarius nubinhibens ISM] gi|83838280|gb|EAP77576.1| HemY domain protein [Roseovarius nubinhibens ISM] Length = 525 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 13/374 (3%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 RF + + +KGY+AL G+M++A+ LA M + H L Sbjct: 74 RFINGDETAMSRYFDRNRQEKGYRALTEGMMALASGEGKLA--MSRAARAEKYLHKPELT 131 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL Q A A E + +L+ TR V L + GD ++A + A A Sbjct: 132 NLLTAQAAELTGDRRTAEEVYKRLLKDDKTRFVGVRGLLKQKIEEGDTDTALKLAETAFG 191 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSLENAD 238 + P V + ++Q +W A LN K K+ ++ +R R AIL +A + + A Sbjct: 192 LKPTHEEVQDTLLQLQAGQADWKGARATLNAKLKHGSLPRDLHRRRDAILALAEARDIAA 251 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + I + AIE+ +L + + A++ AA++ I KR A ++ K W+ PHP++A Sbjct: 252 ENSTIEAKETAIEANRLSPHLVPAAVMAAQAYIEDGSKRYATRVIRKAWESQPHPDLAAA 311 Query: 299 YTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--KIA 355 Y + + T +LKR +L +++ + E+ ++ ++ L++ + D A+ L + A Sbjct: 312 YAAIEPDETPDQRLKRFAKLFKLSPDHPEAKLVEAE--LQIAAEDFPAARRALGTLAETA 369 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKT 414 P ++A IE+ N + W A+ A P WI ++ ++ W P Sbjct: 370 PDARSLTIMAAIERGAGANDTVVKGWLARAVAAARGPQWICENCQHIHHEWAPTCAHCHA 429 Query: 415 LCYFEWK-IPTKSP 427 + EW+ P +P Sbjct: 430 VDTLEWRNAPGAAP 443 >gi|83941980|ref|ZP_00954442.1| HemY domain protein [Sulfitobacter sp. EE-36] gi|83847800|gb|EAP85675.1| HemY domain protein [Sulfitobacter sp. EE-36] Length = 503 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 104/441 (23%), Positives = 185/441 (41%), Gaps = 19/441 (4%) Query: 1 MLRLIRYFFVISLVI--CSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI- 56 +++++ + VI+ + SF++ S V++ Y P +++++ + WI Sbjct: 5 LIKIVVFVAVIAAITWGASFLLESSGGLQVTVM--GTEYSFGPLQSVIAVVLLIVAVWIM 62 Query: 57 -----LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111 LL AV F L + KGY+AL GLM++A+ LA M Sbjct: 63 LKIFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRLA--MAKAAK 120 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 L LL Q A A E ++ TR V + + GD Sbjct: 121 ADKYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEGDTE 180 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAI 227 +A + A KA I P + +++ ++W+ A LN K KN + R A+ Sbjct: 181 TALKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRRDAV 240 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L ++ + + +G+ I + AIE+ +L + I A++ AA I Q K + A +L+K W Sbjct: 241 LALSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLKKAW 300 Query: 288 KVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 V PHP++A + + + T +LKR L + + E+ ++++++ + QA Sbjct: 301 DVQPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQARR 360 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405 ++ P L+A IE+ + + W AL P WI D+ ++ + W Sbjct: 361 SLGDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIHASW 420 Query: 406 LPLSPISKTLCYFEWKIPTKS 426 P+ + WK P S Sbjct: 421 KPICENCHSFDTLAWKTPPMS 441 >gi|84684559|ref|ZP_01012460.1| Uncharacterized HemY-like membrane protein [Maritimibacter alkaliphilus HTCC2654] gi|84667538|gb|EAQ14007.1| Uncharacterized HemY-like membrane protein [Rhodobacterales bacterium HTCC2654] Length = 504 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 97/439 (22%), Positives = 179/439 (40%), Gaps = 15/439 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 + ++I + +I + + + G + Y +++++ + WILL Sbjct: 5 LFKIILFVVLIGAATVGATYLLETDGGIRVDIGAQEYNLGALQAVIALIVLVVTLWILLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A RF + + KGY+AL G+M++A+ A + + Sbjct: 65 LAGLIVATIRFLNGDETAISRHFDRNRERKGYEALADGMMALASGEERTA--ITKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L L+ Q A A E + +L TR V L + GD ++A Sbjct: 123 RYLRRPELTNLITAQAAEMAGDRKKATEVYKRLLADERTRFVGVRGLMKQKLEEGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229 + A KA + P + ++ +W A L +K K+ K+ + R A+L Sbjct: 183 MKLAEKAFALKPQHAETGDVLLALQATQNDWHGARETLGKKVKHGALPKDVGKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + G+ I + AIE+ KL + I S+ AA+S + Q+ KR A +L K WKV Sbjct: 243 LQEAKGIFQDGNSIRAREAAIEANKLSPDLIPGSVLAARSYLEQDNKRYAARVLTKTWKV 302 Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP+IA + + +E +LKR L + + + E+ ++++++ + D+A Sbjct: 303 QPHPDIAEAFAEIEPNETPEQRLKRFKALTKEHPDHPENKMLLAELHIAAEQFDKAREAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 P + + L+A IE+ +I W A+ A P W+ D + + + W P Sbjct: 363 GDLPTTKPTQRVLTLMAAIERGLEAPDSEIRAWLAKAVVAPRGPQWVCDKCHTVHADWGP 422 Query: 408 LSPISKTLCYFEWKIPTKS 426 + W P ++ Sbjct: 423 VCENCGAFDTLSWSEPRET 441 >gi|83953029|ref|ZP_00961751.1| HemY domain protein [Sulfitobacter sp. NAS-14.1] gi|83841997|gb|EAP81165.1| HemY domain protein [Sulfitobacter sp. NAS-14.1] Length = 503 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 95/384 (24%), Positives = 160/384 (41%), Gaps = 8/384 (2%) Query: 49 YFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHS 108 + L + LL AV F L + KGY+AL GLM++A+ LA M Sbjct: 60 WIMLKIFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRLA--MAK 117 Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 L LL Q A A E ++ TR V + + G Sbjct: 118 AAKADKYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEG 177 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRN 224 D +A + A KA I P + +++ ++W+ A LN K KN + R Sbjct: 178 DTETALKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRR 237 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+L ++ + + +G+ I + AIE+ +L + I A++ AA I Q K + A +L+ Sbjct: 238 DAVLALSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLK 297 Query: 285 KIWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K W V PHP++A + + + T +LKR L + + E+ ++++++ + Q Sbjct: 298 KAWDVQPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQ 357 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLS 402 A ++ P L+A IE+ + + W AL P WI D+ ++ Sbjct: 358 ARRSLGDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIH 417 Query: 403 SVWLPLSPISKTLCYFEWKIPTKS 426 + W P+ + WK P S Sbjct: 418 ASWKPICENCHSFDTLAWKTPPMS 441 >gi|261884328|ref|ZP_06008367.1| hypothetical protein CfetvA_03481 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 266 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 13/208 (6%) Query: 222 NRNRAILLIARSLENADKGDMIASYHD-----AIESLKLCDNSIMASICAAKSLISQNKK 276 + RA LL A+++ D ++H A+E+ KL + + A++ AA++L + + Sbjct: 13 KKERAALLTAKAMATLD------THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEI 66 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIA 335 RK ILE WK PHP+IA+ Y + S +T +LKRA L + + E + +++ A Sbjct: 67 RKGSKILEAAWKRFPHPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAA 126 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395 E G A A ++ APR+ +LLLA IE+A + + K+ W A+ A DP W Sbjct: 127 YEAGEYSVARDNAEQVLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWT 186 Query: 396 SDDGYLSSVWLPLSPISKTLCYFEWKIP 423 + D Y+ W P+SP++ L FEWK+P Sbjct: 187 A-DCYVCEQWSPVSPVTGRLNSFEWKVP 213 >gi|84501232|ref|ZP_00999437.1| HemY domain protein [Oceanicola batsensis HTCC2597] gi|84390523|gb|EAQ03011.1| HemY domain protein [Oceanicola batsensis HTCC2597] Length = 502 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 119/504 (23%), Positives = 207/504 (41%), Gaps = 28/504 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPE---DVSITWGNRLYRTSPF--VILSIL-----YFFLF 53 L++ ++LV + + S+ + V I G +P VI ++L + FL Sbjct: 5 LVKIIVFVALVAAATLGASYLLDMQGGVLIAMGGIEINLTPIKAVIAAVLLVLAVWLFLK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + LL A+ RF L + KGY+AL GLM++A+ R+ S S+ Sbjct: 65 LFGLLIALLRFINGDETALSRYFDRNRERKGYEALSDGLMALASGE---GRRAMSKASRA 121 Query: 114 HTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 F + L LL Q A + A + +L TR V + + GD ++ Sbjct: 122 ERFLDRPDLTTLLTAQAAEMVGDKDKAEAAYKKLLSDDRTRFVGVRGIMKQKLAAGDTDT 181 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AIL 228 A A KA I P V + +++ +W A L K ++ ++ +R R A+L Sbjct: 182 ALALAEKAFAIKPGHEEVQDTLLRLQAQRSDWKGARATLKAKLRHGNLPRDVHRRRDAVL 241 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++ + + I S AIE+ KL + I A++ AA+S I Q +KR A +L+K W+ Sbjct: 242 ALSEAKGVFSEDGTIESREAAIEANKLSPDLIPAAVMAARSYIDQGQKRYAARVLKKAWE 301 Query: 289 VNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 PHP++A + + + T +LKR +L + ES ++++++ + +A Sbjct: 302 AAPHPDLAAAFAEIEPDETPQERLKRFQQLVKSAPNHRESRLLMAELNIAAEDFPEARRA 361 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWL 406 P ++A IE+ + W A+ A P W ++ ++ + W Sbjct: 362 LGDLASENPDARTLTIMAAIERGEGAPDAIVKGWLARAVSAPRGPQWTCENCHHIHAHWQ 421 Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPAD---DLQSMLNNGKKNHLPSI 463 P+ WK P L + D D + + +PS Sbjct: 422 PICDNCGAFDTLAWKTPPMGEAQAPVGTAMLPLIVGQIEDWGADAPDRPDR-EDEDMPS- 479 Query: 464 KKVSSFEDSTIHPLDPHIRQPDDP 487 S ED+ I P DP ++P+ P Sbjct: 480 ---SEPEDAEILPSDPPSQEPEKP 500 >gi|254486881|ref|ZP_05100086.1| HemY domain protein [Roseobacter sp. GAI101] gi|214043750|gb|EEB84388.1| HemY domain protein [Roseobacter sp. GAI101] Length = 502 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 94/395 (23%), Positives = 168/395 (42%), Gaps = 14/395 (3%) Query: 44 ILSILYFFLFAWI------LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97 +++I+ + W+ LL AV F L + KGY+AL GLM++A+ Sbjct: 49 VIAIIVLVIAVWLVLKIISLLIAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALAS 108 Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 LA + L LL Q A A E + ++ +TR V Sbjct: 109 GEGRLA--LSKAAKADKYLERPELTNLLIAQAAEMAGDKRKAEETYKKLVANESTRFVGV 166 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + GD ++A + A KA + P + +++ ++WS A LN K KN Sbjct: 167 RGILKQKLAEGDTDTALKLAEKAFALKPKHADTGDILLKLQAEKEDWSGARETLNTKLKN 226 Query: 218 AK----EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + R A+L ++ + + +G I + AIE+ +L + I A++ AA S I Q Sbjct: 227 GQLPRDVHKRRDAVLALSEAKDVFTEGHSIEAREAAIEANRLSPDLIPAAVMAAHSYIDQ 286 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVS 332 K + A +L+K W V+ HP++A+ + + + T +LKR L + E+ ++++ Sbjct: 287 GKPKYAARLLKKAWSVHAHPDLASAFAAIAPDETPKERLKRFTALTRTQPDDPETKMLLA 346 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 ++ + +A ++ P L+A IE+ + + W AL P Sbjct: 347 ELNIANEDFPEARRSLGNLVETDPTARSVTLMAAIERGEGASDTVVKGWLARALTVSRGP 406 Query: 393 LWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426 WI D+ ++ + W P+ + WK P S Sbjct: 407 QWICDNCQHIHTNWKPICDNCHSFDTLAWKTPPMS 441 >gi|254459948|ref|ZP_05073364.1| HemY domain protein [Rhodobacterales bacterium HTCC2083] gi|206676537|gb|EDZ41024.1| HemY domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 494 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 8/373 (2%) Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 LL AV F L K KGY+AL G+M++A+ + + M + Sbjct: 68 LLVAVLNFINGDETALSRYFSKNRERKGYQALSEGMMALASGDG--SAAMSKAAKAEKYL 125 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L LL Q A A E + +++ ATR V + + GD ++A Sbjct: 126 AKPELTNLLTAQAAEMAGDRRKAEETYKKLVKDEATRFVGVRGIMKQKLAEGDTDTALEL 185 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIAR 232 A A + P + +++ ++W+ A L K K+ R A+L +++ Sbjct: 186 AEHAFALKPKHEETQDILLKLQAQGQDWAGARKTLAAKLKSGSLPRDVHKRREAVLALSQ 245 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 S D+G + A E+ +L + I A++ AA+S I Q+KKR A +L+K W V PH Sbjct: 246 SKGVFDEGKDTEAREAATEANRLAPDLIPAAVMAARSYIEQDKKRYAVRVLKKAWDVQPH 305 Query: 293 PEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 PE+A Y + E T V ++KR L + + + E+ ++ +++ + A Sbjct: 306 PELAAAYAAIEPEETPVERIKRFANLTKSHADHAETKMLNAELNIAAEDFPAARRAMGDL 365 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSP 410 + AP ++A IE+ + + W AL A P W+ D ++ + W P+ Sbjct: 366 VDTAPDARSLTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCDACNHIHAEWEPVCG 425 Query: 411 ISKTLCYFEWKIP 423 + WK P Sbjct: 426 NCASFDTLSWKSP 438 >gi|56698662|ref|YP_169039.1| HemY domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56680399|gb|AAV97065.1| HemY domain protein [Ruegeria pomeroyi DSS-3] Length = 493 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/436 (22%), Positives = 185/436 (42%), Gaps = 15/436 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSP------FVILSILYFFLFA 54 ML+++ + +I+L+ + V IT Y P F +L + + F Sbjct: 1 MLKILVFVAIIALLALGAGFLMEASGGVQITVAGTEYTLGPLQSVIGFGLLVVAVWLFFK 60 Query: 55 WI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + LL A +F L + +GY+AL GLM++A+ LA M + Sbjct: 61 LLTLLIATLKFLNGDETALSRYFDRGRERRGYQALTEGLMALASGEGRLA--MAKAARAE 118 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E ++ +TR V + + GD +A Sbjct: 119 KLLQKPELTNLLVAQAAEMTGDTKKAAETYRKLVTDQSTRFVGVRGIMKQKLAEGDDETA 178 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P + ++ A++W+ A L K K + R A+L Sbjct: 179 RKLAEKALALKPRHEETQDVLLTLQTRAQDWAGARATLTSKLKTGTLPRDVYKRRDAVLA 238 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + + + AIE+ +L + I A+ AA++ I++ K + A IL K W+V Sbjct: 239 LSEARDLLSETASLDQQERAIEANRLSPDLIPAAAMAARAHIAKGKPKNAAKILTKAWQV 298 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + + T ++KR L + + + E+ ++++++ + +A Sbjct: 299 QPHPDLAHAFAEIAPDETPAARIKRFAALAKAHPQHAETRLMMAELNIVAEDFPEARRAL 358 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 + AP + L+A IE+ + + W AL A P W+ D+ ++ + W P Sbjct: 359 GDLLDHAPDARAYTLMAAIERGEGASDAVVQGWLARALTAPRGPQWVCDNCQHIHAAWAP 418 Query: 408 LSPISKTLCYFEWKIP 423 + + W+ P Sbjct: 419 VCGNCNSFDTLSWRAP 434 >gi|259417169|ref|ZP_05741088.1| HemY domain protein [Silicibacter sp. TrichCH4B] gi|259346075|gb|EEW57889.1| HemY domain protein [Silicibacter sp. TrichCH4B] Length = 497 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 98/447 (21%), Positives = 189/447 (42%), Gaps = 16/447 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +L+++ + +++L+ ++ V IT Y +++++ + W+ Sbjct: 5 LLKILVFVAIVALMAFGAGVLMETAGGVQITVAGIEYTLGALQSVMALVALMVLTWLFFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A RF L K +GY+AL LM++A A + + Sbjct: 65 LLSLLIATLRFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LSKAAKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L L+ Q A + A E + +L +TR V + + GD +A Sbjct: 123 RYLQDPALTDLVVAQAAEMAGDTHKASEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P V + +++ A++W+ A L K K + + R A+L Sbjct: 183 RQLAEKALALRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S + AIE+ +L + + A+ AA+S I++ K R A IL+K W+ Sbjct: 243 LSSSKALLAEEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEA 302 Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + +E+ ++KR L + + E+ ++ +++ + +A Sbjct: 303 QPHPDLAHAFAEIEPNESAQERVKRFETLLRVKPDHDETRLVRAELLIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 + AP L+A IE+ + W AL A P W+ + ++ + W P Sbjct: 363 GDLVDRAPDARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSEN 434 + WK P ++PEY S+ Sbjct: 423 TCENCASFDTLTWKRP-ETPEYHSATG 448 >gi|255264670|ref|ZP_05344012.1| HemY domain protein [Thalassiobium sp. R2A62] gi|255107005|gb|EET49679.1| HemY domain protein [Thalassiobium sp. R2A62] Length = 484 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 86/393 (21%), Positives = 168/393 (42%), Gaps = 14/393 (3%) Query: 43 VILSILYFFLFAWI------LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA 96 ++L + W+ LL A +F + ++ KG+ AL G+M++A Sbjct: 48 LVLGAIAIIFLVWLGFKIFGLLVATFKFLNGDETAISRYFNRNRERKGFDALSDGMMALA 107 Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + +A S + L LL Q A A + + +L+ TR Sbjct: 108 SGEGRVALAKASRA--EKYLERPELTNLLTAQAAEMAGDRVKAEQTYKRLLEDDRTRFVG 165 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 V + + + GD ++A + A KA + P + + +++ + +W+ A L+ K K Sbjct: 166 VRGIMKQKLQAGDTDTALKLAEKAFALKPKHVEIQDTLLKLQADSSDWAGARRTLSAKLK 225 Query: 217 NA---KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + ++ +R R A+L ++ + + G+ I + AIE+ +L + I A++ AA+S I Sbjct: 226 SGSLPRDVHRRRDAVLALSEARDILGSGESIEAREAAIEANRLSPDLIPAAVMAARSYIE 285 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIV 331 Q + R A +L+K W+ PHP++ + + + T V ++KR L + E+ +++ Sbjct: 286 QGQPRYAARVLKKTWEAQPHPDLGAAFAEIAPDETPVARIKRFRALARAHPNHAETQMLM 345 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +++ + +A P ++A IE+ + + W AL A Sbjct: 346 AELHIANEDFPEARRALGELATTEPTARSLAIMAAIERGAGADDAVVRGWLTRALSAPRG 405 Query: 392 PLWISDD-GYLSSVWLPLSPISKTLCYFEWKIP 423 P WI D+ + + W P + WK P Sbjct: 406 PQWICDNCSNIHAAWSPTCDNCGSFDTLTWKTP 438 >gi|126734495|ref|ZP_01750242.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2] gi|126717361|gb|EBA14225.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2] Length = 457 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 104/432 (24%), Positives = 183/432 (42%), Gaps = 29/432 (6%) Query: 47 ILYFFLFAWILLFAVSRF-FLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNIPLAR 104 ++ +L +L V+ F FL+ RN + KGY+AL G+M++A+ LA Sbjct: 31 VVAVWLGLKLLALCVATFKFLNGDETAISRYFDRNRERKGYEALSEGMMALASGEGHLA- 89 Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 M L LL Q A A E + +L TR V + + Sbjct: 90 -MTKAARADKYLQQPQLTNLLTAQAAEMTGDRKTAEETYKKLLSDDKTRFVGVRGIMKQK 148 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEW 221 GD ++A A KA + P + +++ +W+ A L K K+ ++ Sbjct: 149 LSDGDTDTAMALAQKAFALKPKHEETQDVLLRLQAEKSDWAGARKTLGAKLKSGSLPRDV 208 Query: 222 NRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 ++ R A+L ++ + + D+G I + AIE+ +L + I A+I AA+ I + R A Sbjct: 209 HKRRDAVLALSEARDILDEGKTIEAREAAIEANRLSPDLIPAAIMAARGYIGEGNARYAT 268 Query: 281 VILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +L K+W PHP+IA + + E++ +LKR +L + + E+ +++++ L + Sbjct: 269 RVLTKVWNAQPHPDIAAAFAEIAPDESSDERLKRFTKLTKTTADHPETKMLMAE--LHIA 326 Query: 340 SIDQAHAKAMLA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397 + D AK L ++ P ++A IE+ + + W AL A P WI Sbjct: 327 AEDFPAAKRALGELVEKDPTARNLTIMAAIERGEGADDSVVRGWLTKALTAPRGPQWICG 386 Query: 398 D-GYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADD--LQSMLNN 454 + ++ W + WK P S ++A PA L ++ Sbjct: 387 NCQHIHPTWAATCDNCGSFDTLAWKTPPAS-------------DVAMPAGTEMLPLIVGQ 433 Query: 455 GKKNHLPSIKKV 466 K+ LPS + V Sbjct: 434 TKEAQLPSTEVV 445 >gi|110677862|ref|YP_680869.1| hypothetical protein RD1_0473 [Roseobacter denitrificans OCh 114] gi|109453978|gb|ABG30183.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 492 Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 113/491 (23%), Positives = 204/491 (41%), Gaps = 32/491 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF--VILSILYFFLFAWILL 58 ++++I + ++ + + + V + + SP VI +++ F+ W+ L Sbjct: 5 LIKIILFVVAVAALAMGAVYLLESEGGVQVQVMGTEFTFSPIQSVIAAVVLIFVV-WLFL 63 Query: 59 ------FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112 A RF + + KG++AL GLM++A+ +A M+ Sbjct: 64 KLLSLLVACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MNKAAKA 121 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + + L LL Q A A E + ++ ATR V + + GD ++ Sbjct: 122 ERYLNKPELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDT 181 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AIL 228 A + A KA I P V + +++ ++WS A L+ K K ++ +R R A+L Sbjct: 182 ALQLAEKAFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHRRRDAVL 241 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++ + + I AIE+ KL + I A++ AA + QN+ R A +L+K W+ Sbjct: 242 ALSEAKDILSDASSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWE 301 Query: 289 VNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-HA 346 V+PHP++A + + +E ++KR + + I E+ E+ ++++++ + +A A Sbjct: 302 VHPHPDLAAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRA 361 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405 LA A + + L+A IE+ + W AL P WI D+ ++ W Sbjct: 362 LGDLAETDATARSV-TLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHREW 420 Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 P ++ WK P S EMA P L G P Sbjct: 421 GPFCENCESFDTLAWKTPPMS-------------EMAMPGGMQMLPLIVGALEEKPDETS 467 Query: 466 VSSFEDSTIHP 476 ED+ I P Sbjct: 468 GDIIEDAEIIP 478 >gi|260431926|ref|ZP_05785897.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415754|gb|EEX09013.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 506 Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 98/450 (21%), Positives = 198/450 (44%), Gaps = 16/450 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-WILL- 58 +L+++ + ++ L+ + V IT SP + L +FA W+ L Sbjct: 5 LLKILVFVVIVGLLAMGAGYLMESSGGVQITALGLEITLSPLQSVIALGVLVFAVWLGLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A +F L + +GY+AL GLM++A+ +A + + Sbjct: 65 LLGLLIATLKFINGDETALSRYFDRSREQRGYQALADGLMALASGEGRIA--LTKARKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L LL Q A A E + ++ PATR V + + GD ++A Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKAAETYKKLVSDPATRFVGVRGILKQKLAEGDEDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P + +++ A++W+ A + L K K + R A+L Sbjct: 183 RKLAEKALQLKPRHEETQDVLLKLQTKAQDWAGARSTLTAKLKAGYLPRDVYRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + D+ + AIE+ +L + + A+ AA++ I++ K R A IL+K W+ Sbjct: 243 LSEAKDILDESATVEQQERAIEANRLSPDLVPAAAMAARAYIAKGKPRAATKILKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + ++ + T ++KR L I+ + E+ +I +++ + +A Sbjct: 303 QPHPDLAHAFAEIVPDETPEERIKRFATLTRIHPDHPETRLIRAELNIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 ++ + L+A IE+ + + W AL+A P W+ ++ + + + W P Sbjct: 363 GDLVEKGADARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCENCHDIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINF 437 + + W+ P K+PE ++ ++ Sbjct: 423 VCSTCHSFDTLSWQRP-KTPEIATATGVHM 451 >gi|114765154|ref|ZP_01444298.1| HemY domain protein [Pelagibaca bermudensis HTCC2601] gi|114542429|gb|EAU45456.1| HemY domain protein [Roseovarius sp. HTCC2601] Length = 511 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 95/439 (21%), Positives = 180/439 (41%), Gaps = 15/439 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF------VILSILYFFLFA 54 +L++I + V++ + V + IT G + P ++L I + +F Sbjct: 5 LLKIILFVAVVAALTLGAGYVMESQGGIQITAGGYEFNLGPLQSVIAVIVLVIALYVVFK 64 Query: 55 WI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + LL AV +F L + KGY+AL G++++++ LA M Sbjct: 65 LVSLLIAVLKFINGDDTALSRYFDRNRERKGYQALSEGMLALSSGEGKLA--MAKAQKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 H L LL Q A A E + ++ TR + + GD +A Sbjct: 123 RYLHRPGLTNLLTAQAAEMTGDTRKAEEVYKKLITNDETRFVGIRGMMKLKLAKGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229 + A +A + P P + + ++Q +W A L+ K K+ + R A+L Sbjct: 183 LKLAERAFALKPKHPEIQDTLLQLQAQKHDWRGARQTLSAKLKHGSLPRDVYRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + + I + AI S K + I + AA++ I++ +++KA IL+K W V Sbjct: 243 LSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARAYIARGEQKKAVRILKKTWSV 302 Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T ++KR + I + E+ ++ +++AL +A Sbjct: 303 QPHPDLAAAFAEIAPDETPAERMKRFRTITSIRPDHRETRLLRAELALAAEDFPEARRAM 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P ++A I + ++ W AL A P W+ D ++ W+P Sbjct: 363 GDLVDKEPDARTLTVMAAIARGEGAPETEVRGWLAKALVAPRGPQWVCDSCHHIHGEWVP 422 Query: 408 LSPISKTLCYFEWKIPTKS 426 + W P +S Sbjct: 423 VCENCGGFDTLSWTTPPQS 441 >gi|163732926|ref|ZP_02140370.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149] gi|161393461|gb|EDQ17786.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149] Length = 495 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 105/424 (24%), Positives = 179/424 (42%), Gaps = 23/424 (5%) Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 A RF + + KG++AL GLM++A+ +A M V + + Sbjct: 71 ACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MTKAVKAERYLNKP 128 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A A E + ++ ATR V + + GD ++A + A K Sbjct: 129 ELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDTALQLAEK 188 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSLE 235 A I P V + +++ ++WS A L+ K K ++ ++ R A+L ++ + + Sbjct: 189 AFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHKRRDAVLALSEAKD 248 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 I AIE+ KL + I A++ AA + QN+ R A +L+K W+V+PHP++ Sbjct: 249 ILSDQSSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWEVHPHPDL 308 Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-HAKAMLAMK 353 A + + +E ++KR + + I E+ E+ ++++++ + +A A LA Sbjct: 309 AAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRALGDLAET 368 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPIS 412 A + + L+A IE+ + W AL P WI D+ ++ W P Sbjct: 369 DATARSV-TLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHQEWGPFCENC 427 Query: 413 KTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 ++ WK P S EMA P L G P K ED+ Sbjct: 428 ESFDTLAWKAPPLS-------------EMAMPGGVQMLPLIVGALEEKPEEKTGDIIEDA 474 Query: 473 TIHP 476 I P Sbjct: 475 EIIP 478 >gi|260429364|ref|ZP_05783341.1| HemY domain protein [Citreicella sp. SE45] gi|260419987|gb|EEX13240.1| HemY domain protein [Citreicella sp. SE45] Length = 514 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 95/441 (21%), Positives = 186/441 (42%), Gaps = 19/441 (4%) Query: 1 MLRLIRYFFVISLVI--CSFIIVSHYPEDVSITWGNRLYRTSPF------VILSILYFFL 52 +L++I + V++ + +++ SH + IT G + P ++L I + + Sbjct: 5 LLKIILFVAVVAALTLGAGYVMESHG--GIQITAGGYEFNLGPLQSVIAVIVLVIALYVV 62 Query: 53 FAWI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111 F + LL A+ +F L + KGY AL G++++++ LA M Sbjct: 63 FKLVSLLIALLKFINGDDTALSRYFDRNRERKGYHALAEGMLALSSGEGKLA--MAKAQK 120 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 H L LL Q A A E + ++ TR + + GD + Sbjct: 121 ADRYLHRPALTNLLTAQAAEMTGDTRKAEEVYKKLIANDETRFVGIRGMMKLKLAKGDTD 180 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAI 227 +A + A +A + P + + ++Q +W A L+ K K+ + R A+ Sbjct: 181 TALKLAERAFALKPKHAEIQDTLLQLQAQKHDWRGARQTLSAKLKHGALPRDVYRRRDAV 240 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L ++ + + + I + AI S K + I + AA+S I++ + +KA +L+K W Sbjct: 241 LALSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARSYIAKGEPKKAVRVLKKTW 300 Query: 288 KVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 V PHP++A + ++ + T ++KR L + E+ ++ +++AL +A Sbjct: 301 SVEPHPDLAAAFAEIVPDETPAERMKRFRALTSLRVNHRETRLLKAELALAAEDFPEARR 360 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405 ++ P + ++A I + ++ W AL A P W+ D ++ + W Sbjct: 361 ALGDLVETEPDARVLTIMAAIARGEGAGEAEVRGWLAKALVAPRGPQWVCDSCNHIHAEW 420 Query: 406 LPLSPISKTLCYFEWKIPTKS 426 +P+ WK P +S Sbjct: 421 VPICENCGGFDTLSWKTPPQS 441 >gi|126724569|ref|ZP_01740412.1| HemY domain protein [Rhodobacterales bacterium HTCC2150] gi|126705733|gb|EBA04823.1| HemY domain protein [Rhodobacterales bacterium HTCC2150] Length = 488 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 101/440 (22%), Positives = 187/440 (42%), Gaps = 29/440 (6%) Query: 8 FFVISLVICSFII--VSHYPEDVSITWGNRLYRTSPF---------VILSILYFFLFAWI 56 FFV++++ +F + ++ + I +GN Y P V+ L L ++ Sbjct: 10 FFVVAIIALAFGVNYLTSMSGGIQIAFGNTEYTLGPLQSIVALILLVLTLYLILKLIGFV 69 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L F RF + KGY+AL GLM++A+ +A + + Sbjct: 70 LAFV--RFLNGDETAISRYFSANRERKGYQALSDGLMALASGEGRVA--LSQAERARRLL 125 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + L L+ Q A E A + +L+ TR V + + GD +A++ Sbjct: 126 NKPELTNLISAQAAEMEGDTKKAKDIYVELLKDERTRFVGVRGIMKQKLAEGDTETAKKL 185 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIAR 232 A KA D+ P + ++Q ++W+ A LN K N ++ ++ R A+L ++ Sbjct: 186 AEKAFDLKPKHNETGDVLLQLQAENEDWAGARKTLNTKVSNGVLPRDVHKRRDAVLALSE 245 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + + + AIE+ +L + I A++ AAK+ + Q K R A +L WK PH Sbjct: 246 ARDIFANAGAVEAQVAAIEANRLSPDLIPAAVMAAKAYMEQEKPRYATRVLIAAWKSQPH 305 Query: 293 PEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++A + ++ +E T ++KR L + + + E+ +++++ L + D A A+ L Sbjct: 306 PDLAAGFADIVPTETTKARIKRFAGLIKSDPDHAEARLLMAE--LHIADEDFAGARKALG 363 Query: 352 M----KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406 + R ++A IE+ + + W AL A P W D ++ S W Sbjct: 364 GLNDDYLTSRS--LTIMAAIERGEGSDDAIVRGWLTKALGASRGPQWTCDKCNHVHSNWT 421 Query: 407 PLSPISKTLCYFEWKIPTKS 426 + WK P + Sbjct: 422 AICDRCSGFDTLAWKTPAEG 441 >gi|83594895|ref|YP_428647.1| HemY-like [Rhodospirillum rubrum ATCC 11170] gi|83577809|gb|ABC24360.1| HemY-like [Rhodospirillum rubrum ATCC 11170] Length = 433 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 22/410 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + + L++ + ++ +P V++ W TS V+L I L +L F Sbjct: 1 MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLL-ITLVVLIGLLLFF- 58 Query: 61 VSRFF---LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 SRFF L P +++ +G A+ G+ + ++ LARK+ + Sbjct: 59 -SRFFGGILGIPQWWRRRRNEKKLRRGSLAVGEGIAAARGGDVHLARKL--LKDAERLLP 115 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L A A + ++A + +ML+ P T+ L + GDL+ A Sbjct: 116 GAAGTQQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLDLALTRGDLDKAYAIV 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLI--A 231 +A+ DAPW T + + +L ++W+ A + L N K + +A LL A Sbjct: 176 REAVATGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQA 235 Query: 232 RSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 R E GD + A+E L S A++ AA+ L + ++RKA +L +W + Sbjct: 236 RDAELPGRGGDALRLSQQAVE---LDPTSREATLIAARQLAATGRQRKAAQLLIALWAKH 292 Query: 291 PHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP +A Y L E+++ ++ A L N E S + ++ AL+ +A Sbjct: 293 PHPSLAQAYLALWTGEDSLKIVRHAQELTGANPEHPMSRRVFAEAALDAQLWGEARQSLE 352 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399 ++ P I L+A++E+ + W + AL A P+ + +DG Sbjct: 353 PLLRDVPSATICRLMARLEEGEKGDVTAANQWLRRALEAGPE---VEEDG 399 >gi|163742569|ref|ZP_02149955.1| HemY domain protein [Phaeobacter gallaeciensis 2.10] gi|161384154|gb|EDQ08537.1| HemY domain protein [Phaeobacter gallaeciensis 2.10] Length = 507 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 100/447 (22%), Positives = 199/447 (44%), Gaps = 20/447 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF---VILSILYFFLFAWIL 57 +L+++ + +++++ +++ V IT Y S + L+IL F + W+L Sbjct: 5 LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVV--WVL 62 Query: 58 LFAVS------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111 +S RF + K KGY+AL GLM++A+ LA M Sbjct: 63 FKLLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAAR 120 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + L LL Q A A E + ++ +TR V + + GD + Sbjct: 121 AEKYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTD 180 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAI 227 +A++ A KAL + P V + ++ A++W+ A L K K + R A+ Sbjct: 181 TARQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAV 240 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L ++ S +G + AIE+ +L + + A+ AA++ ++++KKR A +L+K W Sbjct: 241 LALSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAW 300 Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + PHP++A+ + + +E ++KR +L + + E+ ++++++ + +A Sbjct: 301 EAQPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARR 360 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405 ++ P L+A IE+ + I W AL+A P W+ + ++ + W Sbjct: 361 ALGDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEW 420 Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISS 432 P+ + W+ P ++PE + + Sbjct: 421 APVCENCASFDTLSWRRP-EAPEIVGA 446 >gi|163738035|ref|ZP_02145451.1| HemY-like protein [Phaeobacter gallaeciensis BS107] gi|161388651|gb|EDQ13004.1| HemY-like protein [Phaeobacter gallaeciensis BS107] Length = 507 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 100/447 (22%), Positives = 199/447 (44%), Gaps = 20/447 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF---VILSILYFFLFAWIL 57 +L+++ + +++++ +++ V IT Y S + L+IL F + W+L Sbjct: 5 LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVV--WVL 62 Query: 58 LFAVS------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111 +S RF + K KGY+AL GLM++A+ LA M Sbjct: 63 FKLLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAAR 120 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + L LL Q A A E + ++ +TR V + + GD + Sbjct: 121 AEKYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTD 180 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----WNRNRAI 227 +A++ A KAL + P V + ++ A++W+ A L K K + R A+ Sbjct: 181 TARQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAV 240 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L ++ S +G + AIE+ +L + + A+ AA++ ++++KKR A +L+K W Sbjct: 241 LALSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAW 300 Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + PHP++A+ + + +E ++KR +L + + E+ ++++++ + +A Sbjct: 301 EAQPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARR 360 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVW 405 ++ P L+A IE+ + I W AL+A P W+ + ++ + W Sbjct: 361 ALGDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEW 420 Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISS 432 P+ + W+ P ++PE + + Sbjct: 421 APVCENCASFDTLSWRRP-EAPEIVGA 446 >gi|21328634|gb|AAM48640.1| conserved hypothetical protein [uncultured marine proteobacterium] Length = 491 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 86/377 (22%), Positives = 163/377 (43%), Gaps = 9/377 (2%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 RF L + +G++AL GLM++A+ + A M + L Sbjct: 74 RFINGDETALSRYFDRNRERRGFEALSDGLMALASGDGRDA--MAKARKADRLLNRPDLT 131 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L+ Q A+A A + +L+ P TR Y L + + GD A + A A Sbjct: 132 NLIMAQAAVANGDRQTAKATYKKLLKDPKTRFVGTYGLLQQHLQDGDTEVALKLAEHAFG 191 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSLENAD 238 + P + +++ ++W T L K K+ K+ ++ R A+ +++S + Sbjct: 192 LKPRHGETQDVLLKLQAGREDWRGVRTTLTAKLKHGSLPKDVHKRRDAVFALSQSRDLRA 251 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 +G + + A+E+ +L + A+I +A+ Q ++A IL W++ PHP++A Sbjct: 252 EGKLDEAQIYAVEANRLAPGLVPAAILSAEGHREQKNVKQASRILRAAWQLAPHPDLAAG 311 Query: 299 YTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L E + +LKR + + + E+ ++++++ + M D A K P Sbjct: 312 FAALAPDEASAARLKRFGQFTKGTESHPETKMLMAELYVAMADFDAARQALGDLAKTDPT 371 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKTLC 416 +LA IE+ + + + A+ A DP WI D+ G++ W P+ + + Sbjct: 372 MRALTILAAIERGDGADDQSVRRLLTQAISAQRDPQWICDNCGHVHHDWEPVCLNCEAID 431 Query: 417 YFEWKIPTKSPEYISSE 433 WK P S E +S + Sbjct: 432 SIAWKRPPMS-EAVSPD 447 >gi|85705790|ref|ZP_01036887.1| HemY domain protein [Roseovarius sp. 217] gi|85669780|gb|EAQ24644.1| HemY domain protein [Roseovarius sp. 217] Length = 490 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 90/395 (22%), Positives = 166/395 (42%), Gaps = 12/395 (3%) Query: 42 FVILSILYFFLFAWI----LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97 + L +L F ++ + LL A +F L + DKGY+AL G++++A+ Sbjct: 49 VIALGVLVFAIWLLMKLTGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALAS 108 Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 +A M + L L+ Q A + A E + +L TR V Sbjct: 109 GEGEVA--MAQAAKAEKYLRKPALTNLITAQAAEMAGNRSKAEEVYKRLLTNEKTRFVGV 166 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + GD +A + A A + P V + ++ +W A LN K K Sbjct: 167 RGILRQKLAEGDTETALKLAKTAFTLKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKY 226 Query: 218 A---KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 ++ ++ R A+L ++ + + D+G I + AIE+ +L + I A++ AA+ I Q Sbjct: 227 GNLPRDVHKRRDAVLALSEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQ 286 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVS 332 R A ++ K W V+PHP +A ++ + + T +LKR +L +++ + E+ ++ + Sbjct: 287 GNTRNALRVINKAWLVHPHPNLAAVFAAIEPDETPNQRLKRFAKLLKVHPDHRETRLLAA 346 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 ++ L A ++ P ++A IE+ + W AL A P Sbjct: 347 ELNLAAEDFPAARRALGNLAEVEPDARAVTIMAAIERGEGAPDAVVKGWLARALSAPRGP 406 Query: 393 LWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426 W+ D ++ W P + W+ P S Sbjct: 407 QWVCDKCQHIHVEWSPTCENCNSFDTLSWRAPPNS 441 >gi|114769711|ref|ZP_01447321.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium HTCC2255] gi|114549416|gb|EAU52298.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium HTCC2255] Length = 478 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 102/440 (23%), Positives = 183/440 (41%), Gaps = 29/440 (6%) Query: 43 VILSILYFFLFAWI--LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100 +IL + W+ +L A+ +FF + +K ++GYKAL ++S+AA Sbjct: 52 IILCMSSLLATKWLFGILVAIFKFFNGDETAITRYFNKNKEERGYKALADSMVSMAAGEG 111 Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A +++ + L L+ Q A A + + +L+ TR + L Sbjct: 112 KDA--INNANRAERLLQRPQLTNLVSAQAAEKFGDNKRALKYYKRLLKNDQTRFVGLQGL 169 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + GD +A A KA I P+ + ++W A + + K Sbjct: 170 LKQKLLEGDNETALLLAEKAFSIRPNHDQTLNVLFDLQTEKQDWKGAQKTIKANVRAGKL 229 Query: 221 WN----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 R AILL+A + + G++ AI + K + I A+I AA+ + N K Sbjct: 230 PKDIGLRREAILLLADAKAMLEAGEIDTGKAAAIAANKSSPDLIPAAILAAEMYMLDNNK 289 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 R + IL+K W +NPHP++A + + L E + + KR ++ E E+ ++++++A Sbjct: 290 RASTKILKKTWGLNPHPDLATAFAEINLKETSGERRKRFSSFVKLKSEHYETKLLLAELA 349 Query: 336 LEMGSIDQAHAKAMLAMK----IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + D+ A A+K P L+A IE+ + + W AL A Sbjct: 350 IG----DEDFPAARRAIKDLTSTNPTVRSLALMAAIEKGEGADEKTVRAWLNKALTASRG 405 Query: 392 PLWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQS 450 P WI + + W P +T WK P + + I++E ++F+ + Sbjct: 406 PQWICEKCSNIHLSWQPRCENCETFDSLSWKAPPRDAKKITNEKLDFT-----------A 454 Query: 451 MLNNGKKNHLPSIKKVSSFE 470 + G +N LPS+ + E Sbjct: 455 GILTGAENSLPSVSDIDDAE 474 >gi|254451402|ref|ZP_05064839.1| HemY domain protein [Octadecabacter antarcticus 238] gi|198265808|gb|EDY90078.1| HemY domain protein [Octadecabacter antarcticus 238] Length = 490 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 13/394 (3%) Query: 42 FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNI 100 ++L + +F I L + FL+ RN + KGY+AL G+M++A+ Sbjct: 52 LIVLVASIWLVFKLIGLAIATFKFLNGDETAISRYFSRNRERKGYEALSEGMMALASGEG 111 Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 LA M + L LL Q A A +L+ TR V + Sbjct: 112 RLA--MAKANRAEKFLERPELTNLLTAQAAELAGDRKTAELTYRKLLEDDKTRFVGVRGI 169 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-- 218 + + GD ++A A KA I P + +++ +W A L K K Sbjct: 170 MKQKLQDGDTDTALLLAQKAFAIKPKHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQL 229 Query: 219 -KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + +R R A+L ++ + + +G + + AIE+ ++ + + A++ AA++ +++N Sbjct: 230 PRNVHRRRDAVLALSEAKDVFAEGATLEAQEAAIEANRMSPDLVPAAVMAAQAHVAKNSS 289 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIA 335 R A +++K W V PHP++A+ + + E+ ++KR L +++ E+ +++++ Sbjct: 290 RAATRVIKKAWDVAPHPDLASAFAAIAPDEDPAARVKRFSTLTKVHPNHPETRMLLAE-- 347 Query: 336 LEMGSIDQAHAKAMLAMKIA--PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 L + + D A+ + +A P ++A IE+ + W AL A P Sbjct: 348 LNIAAEDFPEARRAITELVAKDPTARSLTIMAAIERGEGSADAVVRGWLAKALTATRGPQ 407 Query: 394 WISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426 WI D+ ++ VW P+ W+ P K Sbjct: 408 WICDNCQHIHPVWAPICVNCSGFDTLAWREPPKG 441 >gi|254465019|ref|ZP_05078430.1| HemY domain protein [Rhodobacterales bacterium Y4I] gi|206685927|gb|EDZ46409.1| HemY domain protein [Rhodobacterales bacterium Y4I] Length = 498 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 99/444 (22%), Positives = 193/444 (43%), Gaps = 16/444 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 +L+++ + +++L+ ++ V IT Y S ++++ + W+ L Sbjct: 5 LLKILVFVAIVALLAFGAGLLMETAGGVQITVAGTEYTLSALQSVIALGVLVVAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A RF L K KGY+AL GLM++A+ + + Sbjct: 65 LLSLLVATLRFLNGDETALSRYWDKGRERKGYRALSEGLMALASGEG--RLALAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 N L LL Q A + A + + +L TR V + + GD ++A Sbjct: 123 KYLQNPELTDLLVAQAAEMSGDTHKAADAYKRLLSNQQTRFVGVRGIMKQKLSQGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P V + +++ A++W+ A L+ K K + R A+L Sbjct: 183 RQLAEKALALRPKHEEVQDTLLRLQAQAEDWAGARKTLSTKLKTGTLPRDVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S D+ I AIE+ +L + + A+ AA++ +++ KKR A +L+K W+ Sbjct: 243 LSASKGVIDENATIEQREQAIEANRLSPDLVPAAAMAARAYLAKGKKRPAVRLLKKTWQS 302 Query: 290 NPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E+ ++ R +L +N + E+ ++++++ + +A Sbjct: 303 QPHPDLAHAFAEVEPDESAAERVARFDQLARLNPQDDETRLVMAELNIVAEDFPEARRWL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI-SDDGYLSSVWLP 407 + AP L+A IE+ + + W AL + P W+ S+ ++ W P Sbjct: 363 SDLTERAPDARALTLMAAIERGEGADDKVVQGWLTRALTSPRGPQWVCSNCNHIHVEWEP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYIS 431 + + WK P ++PE S Sbjct: 423 VCEHCTSFDTLSWKRP-ETPEVAS 445 >gi|84514840|ref|ZP_01002203.1| HemY domain protein [Loktanella vestfoldensis SKA53] gi|84510999|gb|EAQ07453.1| HemY domain protein [Loktanella vestfoldensis SKA53] Length = 479 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 91/371 (24%), Positives = 158/371 (42%), Gaps = 21/371 (5%) Query: 60 AVSRFFLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118 A+SR+F RN + KGY+AL G+M++A+ LA M + H Sbjct: 82 AISRYF------------DRNRERKGYEALAEGMMALASGEGHLA--MTKAARAEKYLHQ 127 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L LL Q A A E + +L TR V + + GD + A + A Sbjct: 128 PQLTNLLTAQAAEMTGDRRKAEETYKKLLADDRTRFVGVRGIMKQKLAEGDTDLALKLAQ 187 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILLIARSL 234 KA + P + ++Q +W A L K K+ ++ ++ R A+L ++ + Sbjct: 188 KAFALKPKHAETQDVLLQLQADKADWKGARQTLGAKLKSGTLPRDVHKRRDAVLALSEAR 247 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + D+G+ I + AI + +L + I A++ AA+ I+Q R A +L K W PHP+ Sbjct: 248 DILDEGNPIEAREAAIAANRLSPDLIPAAVMAARGYIAQGNARYASRVLVKTWTAQPHPD 307 Query: 295 IANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 IA + ++ + T +LKR L + + E+ ++++++ + A ++ Sbjct: 308 IATAFAEIVPDETPQARLKRFATLTKATPDHPEAKMLMAELHVAAEDFPAARRDIADLVE 367 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPIS 412 P L+A +E+ + + W AL A P WI D ++ W P+ Sbjct: 368 TDPTARSLALMAAVERGVGADDAVVRGWLTRALTAPRGPQWICDKCQHIHPQWGPVCGNC 427 Query: 413 KTLCYFEWKIP 423 WK P Sbjct: 428 AAFDTLSWKRP 438 >gi|99082666|ref|YP_614820.1| HemY-like [Ruegeria sp. TM1040] gi|99038946|gb|ABF65558.1| HemY-like protein [Ruegeria sp. TM1040] Length = 494 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 91/391 (23%), Positives = 164/391 (41%), Gaps = 9/391 (2%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 RF L K +GY+AL LM++A A + + + L Sbjct: 74 RFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LTKAAKAERYLQDPALT 131 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L+ Q A + A E + +L +TR V + + GD +A++ A KAL Sbjct: 132 DLVVAQAAEMAGDTHKAAEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETARQLAEKALA 191 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENAD 238 + P V + +++ A++W+ A L K K + + R A+L ++ S Sbjct: 192 LRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLALSSSKALLA 251 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + AIE+ +L + + A+ AA+S I++ K R A IL+K W+ PHP++A+ Sbjct: 252 EEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEAQPHPDLAHA 311 Query: 299 YTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + +E ++KR L + + E+ ++ +++ + +A + AP Sbjct: 312 FAEIEPNETAEARVKRFEPLLRLKPDHDETRLVRAELLIVAEDFPEARRALGDLVDRAPD 371 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKTLC 416 L+A IE+ + W AL A P W+ + ++ + W P + Sbjct: 372 ARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAPTCENCASFD 431 Query: 417 YFEWKIPTKSPEYISSENINFSLEMAYPADD 447 WK P ++PEY S+ +A DD Sbjct: 432 TLTWKRP-ETPEYHSATGAAMLPLLAGRQDD 461 >gi|119384727|ref|YP_915783.1| HemY domain-containing protein [Paracoccus denitrificans PD1222] gi|119374494|gb|ABL70087.1| HemY domain protein [Paracoccus denitrificans PD1222] Length = 596 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 95/420 (22%), Positives = 170/420 (40%), Gaps = 38/420 (9%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLF- 59 L+++ +F ++ ++ + +S +S+ +G+ Y P ++++ L L WI + Sbjct: 22 LKILIFFAIVLVLTLGAMQLSETGHGLSMVYGSTEYTLGPVQLVIAALVVVLLGWITVRL 81 Query: 60 ----------------AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA 103 A++R+F + KGY AL G++++A+ Sbjct: 82 LGLFLAFLRFLLGDETAINRYFA-----------RSRERKGYDALSEGMLAVASGE--GK 128 Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 ++ LL Q A A E +L P TR + L + Sbjct: 129 LAQDKAAKAAKFLDKPHVTDLLAAQAAEVAGDSRKAGEVYRRLLSDPRTRFVGIRGLMRQ 188 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN- 222 GD +A + A KA + P V + ++Q +W A L K++ + Sbjct: 189 KLDEGDTVTALKLAEKAYALKPKHAEVQDTLLQLQTRQGDWKGARAVLKDKRQQGQLPKD 248 Query: 223 ---RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R A+L + + E G+ I++ AI + + + I A++ AA+S I+QN R A Sbjct: 249 VHIRRDAVLALKEASEVLAHGNSISAREAAISANRASPDLIPAAVLAARSYIAQNDPRNA 308 Query: 280 EVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 +L+K W V PHP IA Y ++ E +L+R L N + E+ ++ +++ L Sbjct: 309 GRVLQKTWSVRPHPSIAATYAEIVPDEKPAARLRRFEDLMRQNPDHEETRLLRAELLLAA 368 Query: 339 GSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397 A A LA K P +LA +E+ + + AL A P W+ D Sbjct: 369 EDFPGARRALGDLAEK-HPTVRSLSILAAVERGEGGDDAVVRGILARALVASRGPQWVCD 427 >gi|159045958|ref|YP_001534752.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12] gi|157913718|gb|ABV95151.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12] Length = 502 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 95/440 (21%), Positives = 183/440 (41%), Gaps = 17/440 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSP-------FVILSILYFFLF 53 +L+++ + +++ + ++ E V I+ + + SP V+L Y Sbjct: 5 LLKILIFVTLVAALTFGATLLMETGEQVRISLASTEFTLSPVAAVVLSLVLLGAAYLLFK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F + + KG++AL G+M++A+ +A M + Sbjct: 65 LAGLLLATLKFLNGDETAISRYFMRNRERKGFEALAQGMMALASGEGRVA--MAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E + ML T+ V L + GD +A Sbjct: 123 RYLGRPDLTQLLTAQAAELSGDRAKATETYKKMLTDERTKFVGVRGLLHQKLSEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229 A KA + P V + +++ + W+ A L K K+ ++ ++ R A+L Sbjct: 183 MALAEKAFALKPRNGEVQDTLLRLQAGDENWAGARKTLAAKLKSGDLPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + + G M + A E+ +L + ++ AA+ I K+R+A +L K W++ Sbjct: 243 YSEAADAVEAGKMDKAEAHANEANRLAPGLVPSAALAARMAIRAGKQRQATKLLRKAWEL 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 NPHPE+A Y ++ + T ++KR L + N ES ++++++ + A KA Sbjct: 303 NPHPELAAAYAEIVPDETAAARIKRFEALVKPNPNHDESRLLMAELFIAAEDFPAAR-KA 361 Query: 349 MLAM-KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406 M + + P ++A +E+ + + W A+ A P W ++ + + W Sbjct: 362 MGDLYETKPNARSLTIMAAVERGEGSDDAIVRAWLAKAVTASRGPQWTCENCNNIHASWT 421 Query: 407 PLSPISKTLCYFEWKIPTKS 426 P+ W P +S Sbjct: 422 PVCGNCGAFDSLSWVEPPES 441 >gi|126732179|ref|ZP_01747980.1| HemY domain protein [Sagittula stellata E-37] gi|126707261|gb|EBA06326.1| HemY domain protein [Sagittula stellata E-37] Length = 518 Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 98/407 (24%), Positives = 173/407 (42%), Gaps = 23/407 (5%) Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQ 112 L A+ RF L H+ KGY AL G+M++A+ I A+K Y Sbjct: 68 FLVALLRFINGDETALSRHFHRNRERKGYAALSDGMMALASGEGRLAIAKAQKAEKY--- 124 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 H L L+ Q A A E + +L TR + + + GD N+ Sbjct: 125 ---LHKPELTDLVTAQAAEMMGDRKKAEETYKKLLTRDGTRFVGIRGIMKQKLASGDTNT 181 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAIL 228 A + A +A + P V + ++Q +W+ A L K K+ + R A+L Sbjct: 182 ALQLAERAFALKPKHEEVQDTLLQLQAEKADWTGARKTLQAKLKHGTLPRDVYKRRDAVL 241 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++++ E ++ + IA+ AIE+ + + + A+ AA++ I+Q + R A +L+K W+ Sbjct: 242 ALSQATEIENRDESIAAAEKAIEANRNSPDLVPAAAKAARAYIAQKRPRNAIRVLKKAWE 301 Query: 289 VNPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 +PHP++A Y + T ++KR + L IN + E+ ++ +++ L +A Sbjct: 302 THPHPDLAAAYAEIEPNETPDERIKRFVPLTRINPDHRETRLLKAELNLAAEHFPEARRS 361 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406 ++ P + ++A IE+ + W A+ A P W+ D+ + W Sbjct: 362 LGDLVEKEPDARVLAIMAAIEKGEGAPDQVVRGWLAKAVTAPRGPQWVCDNCKTIHGEWR 421 Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINF------SLEMAYPADD 447 P WK P +S E + N +LE PA+D Sbjct: 422 PTCTNCGAFDTLSWKTPAQS-EVVLPAQANMLPLIIGALEDKSPAED 467 >gi|310817089|ref|YP_003965053.1| HemY domain protein [Ketogulonicigenium vulgare Y25] gi|308755824|gb|ADO43753.1| HemY domain protein [Ketogulonicigenium vulgare Y25] Length = 514 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 107/520 (20%), Positives = 198/520 (38%), Gaps = 51/520 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLF 59 +L+++ + +++ V + ++ P +T G P +++I L W +L Sbjct: 5 LLKILTFVVIVTGVTAGAVWLAEMPGGAVVTLGGVEVTLRPLESVVAIAIVMLLFWAVLR 64 Query: 60 -----------------AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN--- 99 AVSR+F + KG KAL ++++AA Sbjct: 65 LLGLLLAVLRFINGDDTAVSRYF-----------SRGRERKGMKALSDSVLALAAGEAKE 113 Query: 100 -IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A+ Y+ H +L A + ++A E + +L TR A+ Sbjct: 114 ALARAKVADKYLGAPDVTH------VLLAHTAERAGETHLAEETYKELLTSDRTRFVALQ 167 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + GD +A + A A P+ V + +++ + +W+ A L +K + Sbjct: 168 GLMKQKLTAGDTVTALKLAEAAFKARPENVEVQDVLLRLQAESSDWAGARATLGEKARRG 227 Query: 219 ----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + R A+L ++ + D I + AIE+ +L + + A++ AA+S I Sbjct: 228 ALPRDVYRRRDAVLALSEAQAVFDDKVPIDARERAIEANRLSPDLVPAAVMAARSYIKDG 287 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSK 333 R A +L K W+V PHP++A + ++ E +L R L + + E+ ++ ++ Sbjct: 288 NPRYATRVLRKAWEVQPHPDLAEAFAEIMPDERPDQRLARFETLTNLRTDHAENKMLRAE 347 Query: 334 IALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 + + G A A L L+A IE+ + + W AL A P Sbjct: 348 LLIANGDFPAARRALGELVEGADATSRSLALMAAIERGMGADESVVRGWLTRALTAPRGP 407 Query: 393 LWISDD-GYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPAD--DLQ 449 W+ G + + WLP+ W P S + L + P DL Sbjct: 408 QWVCGQCGKVHAQWLPVCASCHGFDTLAWTTPPASDFAMPGGAAMLPLIVGAPVAPVDLS 467 Query: 450 SMLNNGKKNHLPSI---KKVSSFEDSTIHPLDPHIRQPDD 486 + P+ KV E+ I P P + P++ Sbjct: 468 GDVVEQAVKPAPTPAPQTKVEDAEEEVILPPPPDVELPEE 507 >gi|304320180|ref|YP_003853823.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis HTCC2503] gi|303299083|gb|ADM08682.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis HTCC2503] Length = 512 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 90/414 (21%), Positives = 174/414 (42%), Gaps = 20/414 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + +I+++ + ++ I +G+ T+ S+L+ +L Sbjct: 1 MIRILVFLTIIAVLAAAITGLASVEGFAVIRFGD----TNITARSSVLFGAALIGAVLLI 56 Query: 61 VSRFFLSC----PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIP----LARKMHSYVSQ 112 + LS P+ + +R ++G AL GL ++AA + LAR + Q Sbjct: 57 CATLILSGIVRLPSSIRRQRAERRRERGLIALTRGLEAVAAGDASDAQRLARTAQKQLGQ 116 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 Q + L LL Q A A + MLQ P T + LY ++ GD Sbjct: 117 QG--NEAGLSRLLTAQAAQLAGDEETAQQSFAAMLQAPETEFLGLRGLYLQAMASGDRKE 174 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAIL 228 A++YA +A + P A W ++V + W A L + +++ E R A L Sbjct: 175 ARQYAERAFKLRPGASWAFQSVYALQLERGAWGEARDALLKAQQHGLEKGEPSRRREAAL 234 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L A + D + +A E+L+ A++ AA+ ++ +A +L++ W Sbjct: 235 LTAMAYGAEAAEDTDTAIKEAEEALRKAPGFAPAAVLAAELETKAGRRSRAGKLLDEAWA 294 Query: 289 VNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 ++PHP +A + + E + R + L E+ ES +++++ +G +A A+ Sbjct: 295 ISPHPALAKTMDEIYAKEKLERRTDRLIALANKRPEADESQLLIAEQENRLGKFTEAKAR 354 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL 401 + PR F +A + + ++ W A +A DP+ +D ++ Sbjct: 355 LEPLLTRNPRARTFSAMAAAVR-GLYGSEAAQIWLDRAANAPLDPVPGADGSFV 407 >gi|46201304|ref|ZP_00208051.1| hypothetical protein Magn03009978 [Magnetospirillum magnetotacticum MS-1] Length = 426 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 106/428 (24%), Positives = 184/428 (42%), Gaps = 11/428 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + + L + + ++ P +V+I W TS V+L++L L A +L Sbjct: 1 MRRFLAFLVLTGLAVAGAVWLADRPGEVTIRWQGWRADTSVPVLLAVLALLLLALSVLIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P L KGY AL GL + A+ + A K+ + H+ Sbjct: 61 LIRLVFGAPKRWLAALRLSRQRKGYAALSDGLAAAASGDAARAAKLARKADK--LLHDPA 118 Query: 121 LVYLLEVQIA-LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + LL Q A L+ + +A E+ M + T L + + GD +A+ A K Sbjct: 119 ITGLLSSQAARLSGDDHQLA-ERFRAMTERKETAFLGHQGLAELAVKAGDRTTARAEAAK 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235 A DISP AP ++ ++ ++ A W+ A +++ ++ R RA++L+ R+ + Sbjct: 178 AFDISPTAPDLSVLLLDLHMEAGAWAEAEQVARLARRHGSLSEADFTRRRALILLGRAED 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-E 294 + GD + A +S A AA L + K RKA +L+ +K + HP Sbjct: 238 SMAAGDEAQALDWAQDSRDADPQFTPAVALAADLLRRRGKGRKAASLLKSAFKTHAHPLL 297 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 IA T E+ + ++KR L + N S E V +++ AL A + A+ Sbjct: 298 IAKWLTLGEGESALDRVKRLQDLSQANPASPEGHVALAEAALAAQLWGLARSHLEKALTQ 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLWISDD-GYLSSVWLPLSPIS 412 P + +F LLAQ+E+ + W ++ ++P+P W+ G+ S + P Sbjct: 358 RPTRTVFQLLAQVERDERKDETAAHGWLMKAGTDSVPEPAWVCGGCGHHSPDFALCCPAC 417 Query: 413 KTLCYFEW 420 EW Sbjct: 418 GAAGRLEW 425 >gi|254438357|ref|ZP_05051851.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307] gi|198253803|gb|EDY78117.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307] Length = 475 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 88/392 (22%), Positives = 168/392 (42%), Gaps = 10/392 (2%) Query: 43 VILSILYFFLFAWILLFAVSRF-FLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAHNI 100 +I+ + +L + ++ AV+ F FL+ RN + KGY+AL G++++A+ Sbjct: 37 LIILVALVWLVSKLVGLAVAAFKFLNGDETAISRYFSRNRERKGYEALSEGMLALASGEG 96 Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 LA M + L LL Q A A +L TR V + Sbjct: 97 RLA--MAKANRAEKFLERPELTNLLTAQAAELAGDRKTAELTYRKLLANDKTRFVGVRGI 154 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-- 218 + + GD ++A A KA I P + +++ +W A L K K Sbjct: 155 MKQKLQDGDTDTALLLAQKAFAIKPKHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQL 214 Query: 219 -KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + +R R A+L ++ + +G + + AIE+ ++ + + A++ AA+S +++N Sbjct: 215 PRNVHRRRDAVLALSEAKGVFAEGATLEAQEAAIEANRMSPDLVPAAVMAAQSHVNKNAD 274 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIA 335 R A +++K W + PHP++A + + E+ +LKR L + + + E+ ++++++ Sbjct: 275 RAATRVIKKAWDIAPHPDLAAAFAAIAPHEDPAVRLKRFGALTKAHPDHPETRMLLAELN 334 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395 L +A + P ++A IE+ + W AL A P WI Sbjct: 335 LAAEDFPEARRAITELVAQDPTARSLTIMAAIERGEGSTDAVVRGWLSKALIATRGPQWI 394 Query: 396 SDD-GYLSSVWLPLSPISKTLCYFEWKIPTKS 426 D+ ++ W+P+ W+ P K Sbjct: 395 CDNCQHIHPAWVPVCVNCSGFDTLAWREPPKG 426 >gi|260575763|ref|ZP_05843759.1| HemY domain protein [Rhodobacter sp. SW2] gi|259021916|gb|EEW25216.1| HemY domain protein [Rhodobacter sp. SW2] Length = 491 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 90/385 (23%), Positives = 154/385 (40%), Gaps = 10/385 (2%) Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 LL AV +F + + KGY+AL G++++A+ +A + Q Sbjct: 69 LLVAVLKFLNGDETAVSRYFDRNRERKGYQALSEGMIALASGEARVA--LSRAAKAQKYL 126 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L LL Q A A E + +L TR V L + GD +A + Sbjct: 127 GKPELTTLLTAQAAELAGDSARATEAYKALLTDEKTRFVGVRGLMLQKVASGDKATALKL 186 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232 A KA + P + ++Q +W A T L K + + + R A+L + Sbjct: 187 AEKAFAMKPRHTETQDVLLQLQASQADWKGARTTLGAKLRAGTLPREVFRRRDAVLALQE 246 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D+ I S AIE+ KL + I A+ AA+S I++ + A +L+K W+ PH Sbjct: 247 AKTVFDESASIESREAAIEANKLSPDLIPAAAMAARSYIAKGDAKNATRVLKKAWEARPH 306 Query: 293 PEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++A + + +E+ +LKR L I+ E+ ++++++ L A Sbjct: 307 PDLAAAFAEIEPTESAQARLKRFKLLTAIHPTHEETRLLLAELNLAAEDFPAARRIIGDL 366 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLPLSP 410 P ++A IE+ + + W AL A P W D + + W P+ Sbjct: 367 ATSHPTGRSLAIMAAIERGEGADDAVVRGWLARALTAPRGPQWCCDKCQGIHAQWTPICD 426 Query: 411 ISKTLCYFEWKIPTKS--PEYISSE 433 W+ P + P +E Sbjct: 427 NCGAFDTLSWREPPEGSRPSSTGTE 451 >gi|89056574|ref|YP_512025.1| HemY-like [Jannaschia sp. CCS1] gi|88866123|gb|ABD57000.1| HemY-like protein [Jannaschia sp. CCS1] Length = 509 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 104/501 (20%), Positives = 193/501 (38%), Gaps = 26/501 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPE----DVSITWGNRLYRTSPFVILSILYFFLFAWIL-- 57 L++ I++V+ + ++ E + I +G T ++ + L WIL Sbjct: 6 LLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAVWILFK 65 Query: 58 ----LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 L A R L +R+ KGY AL +M++AA LA + + Sbjct: 66 VVGLLVAFLRMLNGDETALTRYWSRRSERKGYDALGDAMMALAAGEGRLA--IRKAERAR 123 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L L+ Q A +A E + M+ TR V L + GD ++A Sbjct: 124 KALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDDRTRFVGVRGLMQQRLDDGDTDTA 183 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNR-AILL 229 + A KAL + P V ++ ++W A L K ++ +R R A+L Sbjct: 184 LKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDAVLA 243 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +A + + +G ++ + D E+ +L + A++ + + + KR+A + K W Sbjct: 244 LAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKAWDQ 303 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP++A + L+ + L+ + K V + + L + + D A+ Sbjct: 304 APHPDLAAAFA-LIEPDETPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAARKA 362 Query: 350 LA--MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWL 406 L + AP ++A +E+ + W A+ A W+ D+ G++ W Sbjct: 363 LGDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARAVTAPRGNQWLCDNCGHVHEDWT 422 Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466 P+ ++ +W P +S ++ L + D QS P ++ Sbjct: 423 PVCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALED--QSDAPEAAPEAGPDAEEE 480 Query: 467 SSFEDSTIHPLDPHIRQ--PD 485 + D T P +P Q PD Sbjct: 481 AEILDDT--PAEPEAAQVTPD 499 >gi|114568597|ref|YP_755277.1| HemY domain-containing protein [Maricaulis maris MCS10] gi|114339059|gb|ABI64339.1| HemY domain protein [Maricaulis maris MCS10] Length = 492 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 119/507 (23%), Positives = 209/507 (41%), Gaps = 43/507 (8%) Query: 1 MLRLIRY--FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL 58 M+RLI F +++ V+ +F+ ++ P S + + PFV+ + L L +L+ Sbjct: 1 MIRLILAVAFALLTAVLGAFLALN--PGHASFEFLG-MQTEMPFVVAAGLVILLAFLMLV 57 Query: 59 FAVSRFFL-SCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 + L + P + + +R ++GY AL L++ AA + A + Sbjct: 58 VWWGIYMLWTSPDKVKGFMGRRRREQGYDALEKALIASAAGDGEAA--VRQAARADALLD 115 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L LL + A + A E +L TR A L S GD + +A Sbjct: 116 RPALSRLLAARAAESAGNLEGAQVHYEALLNDQKTRVVARRGLAQLSNERGDFAATIDHA 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARS 233 A + A W +A+ V W A+T L + ++ + R R++LL A + Sbjct: 176 GDAFQQAKGARWAFDALFDAQVAKARWRDALTTLTEGERRKQVAPDTARRRRSVLLTAAA 235 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 +E A+ D + A+ + + A+ AA+ L + ++A +LE W PHP Sbjct: 236 VE-AEGTDSENARELAVSAHRAAPGFAPAAALAARLLADGRRHKRASEVLESAWAAAPHP 294 Query: 294 EIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +A + L +T K L+R L +N + ES +++ +IALE G D A+A+L Sbjct: 295 ALARAFQDLRKSDTKAKRLERLKTLAALNPDHRESHLVLIQIALEEG--DAPAARALLDP 352 Query: 353 ---KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW--ISDDGYLSSVWLP 407 P + L A++ + + + + W A HA D W I +G L Sbjct: 353 MMDGTPPSSRLCALAARLARLDGKD-ELARRWMTRASHAGADADWSDIDPEGRL----FA 407 Query: 408 LSPIS-KTLCY-FEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 +P K + Y F + P Y E ++ ++ L + + + + Sbjct: 408 YTPDDWKRMVYVFGDENRLTHPRYERFERAAGAVP--------ETALLDAPRPVRSASSR 459 Query: 466 VSSFEDSTIHPLDPHIRQPDDPGIKEQ 492 +SF ++T R PDDPG+ E+ Sbjct: 460 TTSFAEATP-------RMPDDPGVPEE 479 >gi|163797972|ref|ZP_02191914.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium BAL199] gi|159176766|gb|EDP61337.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium BAL199] Length = 456 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 97/448 (21%), Positives = 179/448 (39%), Gaps = 23/448 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWI--L 57 M R Y +++++ I + P D+ I W G RL PF + ++ + W+ + Sbjct: 1 MRRSFLYIIRLAILVALAIWLVRNPGDIRIDWIGWRL--EMPFALFMVITVAV-TWVAGI 57 Query: 58 LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 ++ L P + + + G++AL GL +IAA + AR+ + Sbjct: 58 GLRMAAGALGAPWAVMRRRADQRRESGFRALTLGLAAIAAGDAEEARRQAREADR--LLR 115 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 + L LL Q A A + T + L ++ GD + A Sbjct: 116 DPSLTRLLSAQAAALNGDTAAAARYFAALRDNEDTAFLGIVGLLRQALARGDEARSLELA 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARS 233 +A + PDAP V + A+ W A L K ++ R+R+ LL R+ Sbjct: 176 EEAYAMRPDAPLVATTRLYGRARARRWFDAQVALYDAVKRRIVPEEDGRRHRSALLTERA 235 Query: 234 LEN--ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 E ADK D + A ++ + + A A+ L K ++ + ++E+ W +P Sbjct: 236 REALAADKLDEALEF--AGKARESVPGFVPAVALEAELLGRTGKAKRGQRLIEEAWPKSP 293 Query: 292 HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKA 348 HP + Y L++E N + + KR L + + ES + +++ AL E+ + +A Sbjct: 294 HPALTEAYRGLVTETNLIDRFKRLHALADHAVDHPESRMTIAEAALDAELWGEARVQLEA 353 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 + + R L A++E A + W + + A DP W G ++ W Sbjct: 354 LTGSDLTARA--CRLRARLEDAEHGDDRAARLWLERSGSAPADPAWTCGSCGAVAPDWSA 411 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENI 435 + W +P + +SS+++ Sbjct: 412 VCGHCGEFDTVAWTLPPRV-SVLSSDDV 438 >gi|254292446|ref|YP_003058469.1| HemY domain protein [Hirschia baltica ATCC 49814] gi|254040977|gb|ACT57772.1| HemY domain protein [Hirschia baltica ATCC 49814] Length = 495 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV--ILSILYFFLFA--WIL 57 +R++ V+ L I + + P+DVSI + Y S + IL I+ L A W + Sbjct: 1 MRIVILLAVVILTIAAVTYAFNAPDDVSIAFNGAEYGMSRYTAGILVIVTGALVAVGWYV 60 Query: 58 LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQQ 113 L + L P L + + K AL GL++ + + ARK + Sbjct: 61 LSTI----LRIPFALNRSAKRARFGKARNALADGLIAAEGGDSIDALKKARKSTNLAKSD 116 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + + L YLL + A A ++ A + + + L + + GDL A Sbjct: 117 AS--DRKLSYLLAARAAEANGDWSDAEHAYSDLSREKGAELVGLRGLAAAAIQRGDLRGA 174 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL--NQKKK--NAKEWNRNRAILL 229 + + KAL + +A W + + A +W A L +K+K + + R RA+L Sbjct: 175 ETHTRKALSLKSNASWPFSTLFELQTKAADWESANETLTIGEKRKSIDLEVARRRRAVLH 234 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 A++ K A A ++ ++ + A+ AA ++ K KA+ +E W++ Sbjct: 235 TAQASRIRQKAPEKAERL-AADAARMAPSFPPAAYIAASLQLAAGKASKAQASIEGAWRI 293 Query: 290 NPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP +A ++ L +E T + KR L IN ES +++ + A+ G D+A Sbjct: 294 RPHPALALLWRDLKTNEPTSARAKRLNALAHINPSHRESRILLVEAAMIQGQWDEAEETL 353 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW--ISDDG 399 ++ + L+ I + ++ W++ A A + W I DG Sbjct: 354 SHVLREGETTRLCTLMEAI-VGGRGDVEQASRWSRLASSAAREADWSDIDPDG 405 >gi|294679027|ref|YP_003579642.1| HemY domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294477847|gb|ADE87235.1| HemY domain protein [Rhodobacter capsulatus SB 1003] Length = 480 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 89/390 (22%), Positives = 158/390 (40%), Gaps = 10/390 (2%) Query: 42 FVILSILYFFLFAWIL--LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99 + L+IL +L +L +FA RF + + KGY+AL G++++A+ Sbjct: 51 LIGLAILTIWLALKVLGFVFAFIRFVTGDETAISRYFDRNRERKGYEALAEGMLAVASGE 110 Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 LA S + L LL Q A+ A E +L TR V Sbjct: 111 SKLAASKASKA--ERYLRRPELTNLLTAQAAMMNGDTRKAEEVYRKLLADQRTRFVGVQG 168 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA- 218 L + GD ++A + A KA ++P V + + +W A L K + Sbjct: 169 LLSQKLAEGDTDTAVKLAQKAFALNPKNLEVQNTLFKLQTEVGDWKGARDVLLAKMRQGQ 228 Query: 219 --KEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K+ ++ R A+L + + D G I + AI + K + I A+ AAK+ + Sbjct: 229 LPKDVHKRRDAVLALQEAKAVLDGGTSIEAQEAAIAAAKASPDLIPAAAMAAKAHYDKGD 288 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKI 334 + A +L K W+ PHP++A ++ ++ E+ +LKR +L + + E+ ++ +++ Sbjct: 289 AKSATRVLLKAWEAQPHPDLAAVFASMVPGESATERLKRFEKLLSLRPDHEETRLLRAEL 348 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 + A ++ P + L+A IE+ + + W AL A W Sbjct: 349 CIAAEDFPAARRALGNLVEANPTSRVLTLMAAIERGEGEDDAVVRGWLAKALTAPRGKQW 408 Query: 395 ISDDGY-LSSVWLPLSPISKTLCYFEWKIP 423 D + S W P+ W+ P Sbjct: 409 CCDKCQNIQSQWGPVCDNCGGFDTLSWREP 438 >gi|83945092|ref|ZP_00957458.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii HTCC2633] gi|83851874|gb|EAP89729.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii HTCC2633] Length = 487 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 107/420 (25%), Positives = 173/420 (41%), Gaps = 39/420 (9%) Query: 1 MLRLIRYFFVISLVICSFIIV--SHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL 58 M+RL VI+ V+ + + V + P V++ + + + +PF L++ L A++L+ Sbjct: 1 MIRLT--LTVIACVLTAMLAVFLTLNPGLVTVEFLGQTTQ-APFA-LAMGALILAAFVLV 56 Query: 59 FA--VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 A V S P +R D+G+ AL L++ AA LA + + Sbjct: 57 VAWWVIAKLWSAPEAWKRFSLRRRRDQGFDALERALIASAAGQGDLA--VRQAARAEALL 114 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L LL + A A A E ML TR A L + D + Sbjct: 115 DRPALSRLLAARAAEAAGDLESAQIHYEAMLADAKTRLVAQRGLVGIAQSRSDSQGLLTH 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLI-- 230 A A + + A W +A+ + V W++A L + ++ R RA+LL Sbjct: 175 AADAFEQAGRARWAFDALFEAQVNVALWAKAEATLTEGERRGHVDRLVAARMRAVLLTAE 234 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-------AAKSLISQNKKRKAEVIL 283 AR LE+AD + +L D + +S A + L Q + R+A IL Sbjct: 235 ARRLESADP----------ETAARLADRAATSSPGFAPAAELAGRLLAEQRRHRRAVDIL 284 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGS 340 E WK PHP +A + +L +T K KRA RL +N + ES +++ + AL+ G+ Sbjct: 285 EDAWKHAPHPALARAFANLRRSDT--KAKRAERLRGLAALNPDHRESRLLLVETALDQGN 342 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-DDG 399 + AH+ ++ +P LA N + W A HA + W D+G Sbjct: 343 REAAHSALKPVLETSPVSARACALAARLARLEENPEDAQRWMARASHAPAEADWSDIDEG 402 >gi|83313522|ref|YP_423786.1| hypothetical protein amb4423 [Magnetospirillum magneticum AMB-1] gi|82948363|dbj|BAE53227.1| Uncharacterized enzyme of heme biosynthesis [Magnetospirillum magneticum AMB-1] Length = 426 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 91/429 (21%), Positives = 173/429 (40%), Gaps = 13/429 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWILLF 59 M R + + + L + + ++ P +V+I W G RL T P ++ + + +L Sbjct: 1 MRRFLVFVVLTGLAVAGAVWLADRPGEVTIRWQGWRLDTTVPVLLAVLALLLVGLSLLAR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V R P KGY AL GL + A+ + A K+ + + Sbjct: 61 LV-RAVFGAPGRWLQSRRLGRQRKGYMALSDGLAAAASGDAARAAKLSRKADK--LLKDP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + LL Q A + ++ M T L + + GD A+ A + Sbjct: 118 AVTALLTTQAAQLGGDADQLRDRFRAMTGRKETAFLGHKGLAELALKSGDRAIARDEAAR 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLE 235 A ++ P A + ++ +V A W+ A L +++ ++ R A++L+ R+ E Sbjct: 178 AFELQPMAADLAVQLLDLHVEAGAWAEAEQVLRLARRHGAVSEADFPRRHALILLGRAEE 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNPHPE 294 GD + D + + D +I A L+ + K RKA +L+ +K +PHP Sbjct: 238 ALRAGDESLAL-DWAQDARDADPLFTPAITLAADLLRRRGKGRKAASLLKAAFKAHPHPL 296 Query: 295 IANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + L E+ + ++K L + N + E + +++ AL+ A A + Sbjct: 297 LITEWRKLGDGESALDRVKSLQELAQANPGAPEGHMALAEAALDAQLWGLARTHLAKAQE 356 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWT-QSALHAMPDPLWISDD-GYLSSVWLPLSPI 411 P + +F LLA++E+ + WT ++A ++P+ W G+ + + P Sbjct: 357 QRPTRAVFALLARVERDERKDEAAANAWTLKAATDSVPESSWTCGGCGHQTPDFALSCPA 416 Query: 412 SKTLCYFEW 420 EW Sbjct: 417 CGAAGRLEW 425 >gi|114798425|ref|YP_761904.1| HemY domain-containing protein [Hyphomonas neptunium ATCC 15444] gi|114738599|gb|ABI76724.1| HemY domain protein [Hyphomonas neptunium ATCC 15444] Length = 478 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 18/258 (6%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 LARK S +H +E L LLE + A A + A ++ ++P + + Sbjct: 109 LARK-----SMRHA-EDERLKLLLEARAAEANDDWAGAERAWGLLTRLPGGQLAGLRGSA 162 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-- 219 + GD +A+ A +AL++ DA W ++ V +W +A+ L +K Sbjct: 163 TAASERGDPLTAETRAREALELRSDADWPFNSLFDIQVAKGDWDKALDTLAMGEKRGLVE 222 Query: 220 --EWNRNRAILLIARS--LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 R RA+L AR+ L A+K S DAI S + A+ A+ L+ K Sbjct: 223 GINLKRRRAVLFTARAVNLPIAEKPAAQKSLADAIRS---APDFPPAAYHGARFLMVDGK 279 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR-LEEINKESVESLVIVSKI 334 + A+ +LE WK PHP +A + L+ ++T + L+ L + + ES ++ ++ Sbjct: 280 AKAAQGVLELGWKARPHPALAQLSRRLVPQDTRENIAARLKALVDAHPSHRESRILAAE- 338 Query: 335 ALEMGSIDQAHAKAMLAM 352 L M S D A LA+ Sbjct: 339 -LSMDSADWVEAIKTLAL 355 >gi|114329085|ref|YP_746242.1| hypothetical protein GbCGDNIH1_2421 [Granulibacter bethesdensis CGDNIH1] gi|114317259|gb|ABI63319.1| hypothetical secreted protein [Granulibacter bethesdensis CGDNIH1] Length = 434 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 95/439 (21%), Positives = 177/439 (40%), Gaps = 22/439 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLY--RTSPFVILSILYFFLFAWILL 58 M R+I+ ++V+ + V+ P V +T G+ L + P I++++ L +LL Sbjct: 1 MRRIIKIVLPAAVVVAAAWYVAGLPGHVGMTVGDDLTIDMSVPAAIVAVVILVLAVHLLL 60 Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118 AV L P + R G A+ L+S+AA + A + + + Sbjct: 61 RAVG-AILGLPRTIRRWRQARTRQAGDYAVSRALVSLAAGDAGGAWREAGKA--RACLGD 117 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 LL + A + + A + + + L E+ D SA A Sbjct: 118 TAQTLLLMAEAARLSGRESEATQAFHALTRTEDASFLGYRGLLREAITREDWTSAAELAR 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 KA P A W+ V + W A++ ++ A A L+ A+ Sbjct: 178 KAELAHPGAAWLRTERVNLAIRGGRWMDALSLAENDQQRAAF-----ATAAAQAELDQAE 232 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 K A ++ +L + A+I A +L + ++R+++ +L K W +P P++A + Sbjct: 233 K------LRTARQAFRLDPSLTSAAIAYATTLRAAGRQRRSDAVLVKAWAAHPQPDLAVV 286 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ + + +++ RL N ES +++++ L G +A + A A ++ +K Sbjct: 287 ALSGVT-DPLTRVRTVKRLVAGNPGHPESHLLLARENLAAGLTGEARSHAEQASRLIDQK 345 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-DDGYLSSVWLPLSPISKTLCY 417 ++LLLA IE+ + + A A PDP W G+ ++ W P T Sbjct: 346 RVWLLLADIEEKEHGPGAAMQAALRRASEASPDPGWRCLHCGHATTHWAAACPACHTPGQ 405 Query: 418 FEWKIPTKS----PEYISS 432 W P + P +SS Sbjct: 406 IRWTTPGDAGVALPPVLSS 424 >gi|23004378|ref|ZP_00047740.1| hypothetical protein Magn03000405 [Magnetospirillum magnetotacticum MS-1] Length = 250 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 6/235 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + +++A Sbjct: 1 MWRALVFLALLAIAAYGAVWIADHPGSVTVVWNGYEIGMSLAIALTGVLVAAIIIGIIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + PA + +R +KG +L G++++ + + PLA + H+ + ++ Sbjct: 61 IMSGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGD-PLAARRHAG-DAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A A + + M P TR + L+ E+ R D +A+ YAT+A Sbjct: 119 LTLLLKAQAAQISGDREAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYATEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIA 231 ++P W EAV++ EWS A + ++ + R RA+LL A Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRASLGLMDKSVARRQRAVLLTA 233 >gi|58616804|ref|YP_196003.1| hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str. Gardel] gi|58416416|emb|CAI27529.1| Hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str. Gardel] Length = 413 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 80/366 (21%), Positives = 158/366 (43%), Gaps = 34/366 (9%) Query: 41 PFVILSILYFFLFAWI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99 I+++++ F+ I L+F V + F C KR DK L G M + N Sbjct: 42 ALCIIAVIFLFVILLIRLVFYVCQCFYGCK--------KRRQDKRIILLDQGYMHLNCGN 93 Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK-LEMMLQIPATREFAVY 158 I A K +++ H F + L +LL+ + +Y +A + ++ +P Sbjct: 94 IEKADKC---ITKLHDFDHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGI 149 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKK 216 + +I D + K L+I W ++ ++++W+ AI +++ K K Sbjct: 150 HILNHIKQIEDQSKQLSLFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLK 209 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-------SIMASICAAKS 269 ++ + ++ +L +Y + L + DN + ++ A+ Sbjct: 210 INVPYDTQETLCILYYAL-----AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQL 264 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 I+ NKKRKA +LE ++++PHP+IA++Y ++ ++ + RL IN + S+ Sbjct: 265 YINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHHDS----QAIHRLYNINSDYYFSIY 320 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHA 388 ++ + AL +G D A K ++ L+ +++ T+ +LYWT A A Sbjct: 321 LIVQDALNLGEYDLAMKHLNNVFKSRTYLSLYFLMLKLKVLVQDYTE-LLYWTDKASKDA 379 Query: 389 MPDPLW 394 + D W Sbjct: 380 ITDQHW 385 >gi|57238815|ref|YP_179951.1| hypothetical protein Erum0840 [Ehrlichia ruminantium str. Welgevonden] gi|58578744|ref|YP_196956.1| hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str. Welgevonden] gi|57160894|emb|CAH57799.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58417370|emb|CAI26574.1| Hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str. Welgevonden] Length = 413 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 79/366 (21%), Positives = 158/366 (43%), Gaps = 34/366 (9%) Query: 41 PFVILSILYFFLFAWI-LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99 I+++++ F+ I L+F V + F C KR DK L G M + N Sbjct: 42 ALCIIAVIFLFVILLIRLVFYVCQCFYGCK--------KRRQDKRIILLDQGYMHLNCGN 93 Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK-LEMMLQIPATREFAVY 158 I A K +++ H F + L +LL+ + +Y +A + ++ +P Sbjct: 94 IEKADKC---ITKLHDFDHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGI 149 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKK 216 + +I D + K L+I W ++ ++++W+ AI +++ K K Sbjct: 150 HILNHIKQIEDQSKQLSLFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLK 209 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-------SIMASICAAKS 269 ++ + ++ +L +Y + L + DN + ++ A+ Sbjct: 210 INVPYDTQETLCILYYAL-----AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQL 264 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 I+ NKKRKA +LE ++++PHP+IA++Y ++ ++ + +L IN + S+ Sbjct: 265 YINTNKKRKAIQLLESEYRISPHPDIAHLYLEIMHHDS----QAIHKLYNINSDYYFSIY 320 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHA 388 ++ + AL +G D A K ++ L+ +++ T+ +LYWT A A Sbjct: 321 LIVQDALNLGEYDVAMKHLNNVFKSRTYLSLYFLMLKLKVLVQDYTE-LLYWTDKASKDA 379 Query: 389 MPDPLW 394 + D W Sbjct: 380 ITDQHW 385 >gi|16124330|ref|NP_418894.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15] gi|221233012|ref|YP_002515448.1| HemY domain membrane protein [Caulobacter crescentus NA1000] gi|13421172|gb|AAK22062.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15] gi|220962184|gb|ACL93540.1| HemY domain membrane protein [Caulobacter crescentus NA1000] Length = 511 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 84/317 (26%), Positives = 134/317 (42%), Gaps = 10/317 (3%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL G +++AA + AR++ + S + LV +L Q A A A Sbjct: 86 EALSRGFLAVAAGDGSEARRL-AQKSSELAEDAPALVRVLAAQAAEAAGDRGAAKSAYNA 144 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ML P R + L + GD +A R+A A ++ A W A+++ + A +W+ Sbjct: 145 MLGFPEMRLAGLRCLMLAAQAEGDRQTAIRHAETAYGLARTARWAWRALLEARLEAGDWA 204 Query: 206 RAITFLNQKKKN------AKEWNRNRAILLIARSLENADKGDMIASYHD-AIESLKLCDN 258 A+ + + E +R + A SL NAD A D A +S+KL + Sbjct: 205 AALQLVQGALERKIVSPVVAERSRAALLAASAASLVNADDPKTRAQALDFATQSVKLKPD 264 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRL 317 + AA+ L K KA ++E WK PHP + Y L +E + +R L Sbjct: 265 FAPGVVMAARLLAEDGKTAKAGGLIETAWKAEPHPALWLAYRDLKTNETPKARAQRLAAL 324 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + E+ ES ++ + AL G A A A L AP L+A++ AN + D+ Sbjct: 325 AAMKPEARESRLLRVESALIGGDPVAARAAARLLDDEAPTARFAGLMARVAAANG-DADE 383 Query: 378 ILYWTQSALHAMPDPLW 394 W + A +P W Sbjct: 384 ARAWIARGVAAPQEPDW 400 >gi|295687520|ref|YP_003591213.1| HemY domain-containing protein [Caulobacter segnis ATCC 21756] gi|295429423|gb|ADG08595.1| HemY domain protein [Caulobacter segnis ATCC 21756] Length = 511 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 86/317 (27%), Positives = 135/317 (42%), Gaps = 10/317 (3%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL G +++AA + AR++ + S + LV +L Q A A A Sbjct: 86 EALTRGFLAVAAGDGSEARRL-AQKSAELAEDAPGLVRVLAAQAAEAAGDRGAAASAYNA 144 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ML P R + L + GD +A R+A A ++ A W A+++ + A +W+ Sbjct: 145 MLGFPEMRLAGLRGLMQAALADGDKITALRHAETAYGLARTARWAWRALLEARLEAGDWA 204 Query: 206 RAITF----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD---AIESLKLCDN 258 A+ L +K + R+RA LL A + + D A A +S+KL + Sbjct: 205 AALQLVQGALERKIVSPAVAERSRAALLAASAASLEESPDPKARAQALDFANQSVKLKPD 264 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRL 317 I AA+ L + K KA ++E WK PHP + Y L +E + +R L Sbjct: 265 FAPGVIMAARLLADEGKTAKAGQLIETAWKAQPHPALWLAYRDLKTNETPKARAQRLAAL 324 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + E ESL++ + AL G A A A L AP L+A++ AN D+ Sbjct: 325 AAMRPEVRESLILRVEAALVGGDPIAARAAARLLDDEAPTARFAGLMARVAAANGQ-ADE 383 Query: 378 ILYWTQSALHAMPDPLW 394 W + A +P W Sbjct: 384 ARAWIARGIDAPREPDW 400 >gi|68171287|ref|ZP_00544688.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str. Sapulpa] gi|88658307|ref|YP_506957.1| HemY domain-containing protein [Ehrlichia chaffeensis str. Arkansas] gi|67999302|gb|EAM85950.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str. Sapulpa] gi|88599764|gb|ABD45233.1| HemY domain protein [Ehrlichia chaffeensis str. Arkansas] Length = 416 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 11/158 (6%) Query: 243 IASYHDAI---ESLKLCDN--SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 I Y D + +++K C S ++ AK I +KKRKA ILE +++NPHP+IAN Sbjct: 236 IQKYDDGLRVLDNIKNCSQQCSTAVTLLKAKFYIDTDKKRKAVNILEHEYRINPHPDIAN 295 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y ++ ++ +L N S+ ++++ A+ G D A + K Sbjct: 296 FYLDIMQHSS----HAIHKLYSFNTGYYFSIYLIAQDAINSGEYDTAMKYLNHSFKTKTY 351 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLW 394 ++ L+ ++ + S N +++LYWT A A+ D W Sbjct: 352 ISLYFLVLKL-KVLSQNYNELLYWTDKIAKDAIADKYW 388 >gi|73666713|ref|YP_302729.1| hypothetical protein Ecaj_0080 [Ehrlichia canis str. Jake] gi|72393854|gb|AAZ68131.1| putative Uncharacterized membrane-bound protein [Ehrlichia canis str. Jake] Length = 413 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 14/223 (6%) Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLEN 236 K L+I W ++ Y L+++WS AI + + K K +N + + +L Sbjct: 170 KMLEIFYKQSWSAIFKLEIYRLSRDWSNAIEEIKKVIKLKVNLPYNVQDMLNIFYYAL-- 227 Query: 237 ADKGDMIASYHDAI---ESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 A + + Y D + +++K C S + A+ ++ ++KRKA ILE ++ NPH Sbjct: 228 AKQCYDVQRYDDGLKVLDNIKNCQKYSTPIVLLKAQCYLNTDRKRKAVSILEYEYRTNPH 287 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 P+IAN+Y ++ N+ K L N E S+ ++++ A+ +G D A Sbjct: 288 PDIANLYLDIMQHNSHAIHK----LYSFNTEYYFSIYLIARDAINLGEYDAAMKYLNNEF 343 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLW 394 K ++ L+ ++ + S + +++LYWT A A+ + W Sbjct: 344 KTQTYISLYFLMLKL-KVLSQDYNELLYWTDKIAKDAISEQHW 385 >gi|329848281|ref|ZP_08263309.1| hemY protein [Asticcacaulis biprosthecum C19] gi|328843344|gb|EGF92913.1| hemY protein [Asticcacaulis biprosthecum C19] Length = 515 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 81/309 (26%), Positives = 128/309 (41%), Gaps = 23/309 (7%) Query: 25 PEDVSITWGNRLYR-----TSPFVILSILYFFLFA-WILLFAVSRFFLSCPAMLFHMLHK 78 P S++W N YR T+ +I+ ++ F A W L ++R P Sbjct: 25 PGLASLSWMN--YRIDIPATAAVIIIGVMAFCAVAFWNLALWLAR----SPQRAERARAD 78 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 + +G AL G M++A + AR+ H+ V N LV +L A Sbjct: 79 QRRRQGDDALTRGFMAVAVGDGSEARR-HA-VKALDLSDNTVLVRILGAMAAEESGDAVA 136 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 M+ +P + + L + R GD A + A +A + + W E + Sbjct: 137 TRTAYSAMVSVPELKLAGLRGLMQLAARQGDKAEAVKLAGEAYNQPRPSMWAFETLFAAR 196 Query: 199 VLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARS--LENADKGDMIASYHD-AIE 251 + A EW+ A+ L +K + R +A L+ A + LE +D M D A Sbjct: 197 LEAGEWAEALDLIEGALTRKLISPIFSERAKASLMAASAARLETSDDAQMRDQALDYAQR 256 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 + KL A+I AA+ L NK +AE +LE W PHP + Y L+S+ T Sbjct: 257 AAKLQPQFTPAAIIAARLLAKANKPGRAEDVLEAAWASRPHPAVWLAYRDLVSDET--PK 314 Query: 312 KRALRLEEI 320 +RA RL+ + Sbjct: 315 ERARRLQGL 323 >gi|58584738|ref|YP_198311.1| membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419054|gb|AAW71069.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 387 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 A+ I K RKA +LE + VNP P+ A IY L SE A RL + + Sbjct: 239 AELYIRLGKIRKASAVLEAEYTVNPTPQSAKIYISLNSEG-------AERLYNLRPDYYF 291 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385 S +++ ++ G D A A+K A I+L++ Q++ D+ +YW ++ Sbjct: 292 SYCLLASSSISSGKYDLASQYLNTAIKKANYMSIYLIMVQLKVV-LQEQDQTIYWLSKMG 350 Query: 386 LHAMPDPLW 394 A+PDP W Sbjct: 351 SEALPDPCW 359 >gi|42521029|ref|NP_966944.1| hypothetical protein WD1232 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410770|gb|AAS14878.1| hypothetical protein WD_1232 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 233 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 A+ I K RKA +LE + VNP P+ A +Y +L S K A RL + + Sbjct: 84 AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDCYF 136 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385 S +++ ++ G D A AMK A I+ ++ Q+ + DK++YW + Sbjct: 137 SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 195 Query: 386 LHAMPDPLW 394 A+PDP W Sbjct: 196 SEALPDPGW 204 >gi|99034641|ref|ZP_01314590.1| hypothetical protein Wendoof_01000593 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 155 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 A+ I K RKA +LE + VNP P+ A +Y +L S K A RL + + Sbjct: 6 AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDYYF 58 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385 S +++ ++ G D A AMK A I+ ++ Q+ + DK++YW + Sbjct: 59 SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 117 Query: 386 LHAMPDPLW 394 A+PDP W Sbjct: 118 SEALPDPGW 126 >gi|225677319|ref|ZP_03788296.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590646|gb|EEH11896.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 406 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 A+ I K RKA +LE + VNP P+ A +Y +L S K A RL + + Sbjct: 257 AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDYYF 309 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385 S +++ ++ G D A AMK A I+ ++ Q+ + DK++YW + Sbjct: 310 SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 368 Query: 386 LHAMPDPLW 394 A+PDP W Sbjct: 369 SEALPDPGW 377 >gi|58698408|ref|ZP_00373319.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630891|ref|YP_002727682.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp. wRi] gi|58535063|gb|EAL59151.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225592872|gb|ACN95891.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp. wRi] Length = 406 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 9/129 (6%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 A+ I K RKA +LE + VNP P+ A +Y +L S K A RL + + Sbjct: 257 AELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPDYYF 309 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSA 385 S +++ ++ G D A AMK A I+ ++ Q+ + DK++YW + Sbjct: 310 SYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLNKMG 368 Query: 386 LHAMPDPLW 394 A+PDP W Sbjct: 369 SEALPDPGW 377 >gi|83310058|ref|YP_420322.1| hypothetical protein amb0959 [Magnetospirillum magneticum AMB-1] gi|82944899|dbj|BAE49763.1| Uncharacterized membrane-bound protein [Magnetospirillum magneticum AMB-1] Length = 469 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 5/209 (2%) Query: 223 RNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R RA++L ++ L++ D D S A E+L + A++ + +S+ ++ +AE Sbjct: 228 RWRAVVLEGQACLDSQD--DPARSLRLAREALAADPGFLPAALHVLRQEVSEGRRSEAEA 285 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +L +W+ P + + L E+ +LKR L E E + + A+ Sbjct: 286 VLAAVWRSAPARILLETCSPLWREDDAESRLKRLEVLAEWAPHDPEGHLAAGEAAVAAAK 345 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-G 399 A M A+KIAP L+A+IE ++ W + A P W+ + G Sbjct: 346 WGVARRHLMAALKIAPDALGCRLMAEIEDKEPGGAERAEIWRRREREAPAAPTWVCEACG 405 Query: 400 YLSSVWLPLSPISKTLCYFEWKIPTKSPE 428 S W P +W P PE Sbjct: 406 ATSGSWAPYCSACAAGAAIQWTRPAHKPE 434 >gi|111073632|emb|CAL29494.1| hypothetical protein OW2-H [Wolbachia endosymbiont of Onchocerca volvulus] Length = 420 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 21/213 (9%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWN--------RNRAILLIARSLENADKGDMIASY 246 ++ Y+L ++W AI K K A ++N + A+ A + + +KG+ + Sbjct: 195 IEGYILHEDWINAIL----KLKEAIKFNIFLPFDCEKMLAVFYCASAKQYENKGNYKKAL 250 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 ++ C + A+ I K RKA V+LE+ + VNP P+ A IY L S Sbjct: 251 RSLFKAQSYCAAFQPINYLRAELYIKLGKIRKASVVLEEEYTVNPTPQSAKIYISLNS-- 308 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 K A +L + + S +++ ++ + D A +AM+ A I+L++ Q Sbjct: 309 -----KGAEKLYNLRSDYYFSYCLLALSSISLSKYDLASQHLDIAMRKANYVSIYLIMIQ 363 Query: 367 IEQANSHNTDKILYW-TQSALHAMPDPLWISDD 398 ++ A ++++YW + A+ DP W D Sbjct: 364 LKVA-LQEYEQVIYWLNKMDSEAISDPYWKCAD 395 >gi|315497774|ref|YP_004086578.1| hemy domain protein [Asticcacaulis excentricus CB 48] gi|315415786|gb|ADU12427.1| HemY domain protein [Asticcacaulis excentricus CB 48] Length = 515 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 84/383 (21%), Positives = 142/383 (37%), Gaps = 17/383 (4%) Query: 25 PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84 P ++ W T + ++ FA + + + + P +G Sbjct: 25 PGTATLIWLGYRIDTPAAAAVIVIGLLAFAAVCFWNLVLWMSRAPQRAERQRANARRRQG 84 Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + L G +++ + + AR+ H N LV +L A Sbjct: 85 EETLTRGFIAVVSGDGAEARRQAIKAVDLH--DNVALVRILNALAAETAHDPVATRAAWT 142 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 ML +P + + L + GD A R A + + A W + + + A EW Sbjct: 143 AMLSVPELKLAGLRGLMALAISEGDRTEAIRLAAEGYNQPKPAMWAFKTLFEARSTAGEW 202 Query: 205 SRAITF----LNQKKKNA--KEWNRNRAILLIARSLENADKGDMIASYHD-AIESLKLCD 257 + A+ LN+K + E R + A LE A +G + D A+ + KL Sbjct: 203 AEALDLVEGALNRKLVSPLFAERARAALMAASAARLEGAAEGQIREQALDYAVRAAKLQP 262 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 ++ AA+ L + NK +AE +LE + PHP I Y L+++ T RA RL Sbjct: 263 MFAPGAVIAARLLAAHNKLGRAEDVLEAAYAAQPHPAIWLAYRDLVNDET--PKDRARRL 320 Query: 318 EEI---NKESVES-LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--N 371 + + N + ES L+ V + L D A A L ++ + L + +A Sbjct: 321 QGLIDRNPQHRESRLLEVERSVLSGVRADIERATAALEDELTEERLTRRLCGLMAKAALA 380 Query: 372 SHNTDKILYWTQSALHAMPDPLW 394 + D W A A +P W Sbjct: 381 LQDVDGARGWVAKASLAKAEPDW 403 >gi|46202657|ref|ZP_00208607.1| hypothetical protein Magn03007324 [Magnetospirillum magnetotacticum MS-1] Length = 471 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 74/193 (38%), Gaps = 9/193 (4%) Query: 245 SYHDAIESLKLCDNSIMAS---ICAA----KSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 S D SL+L ++ A + AA + +S+ ++ +AE +L +W+ P + Sbjct: 244 SQDDPARSLRLAREALAADPGFLPAALHVLRQEVSEGRRSEAEAVLAAVWRSAPARILLE 303 Query: 298 IYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L E+ +LKR L E E + + A+ A M A+KIAP Sbjct: 304 TCAPLWREDDAESRLKRLEALAEWAPHDPEGHLAAGEAAVAAAKWGVARRHLMAALKIAP 363 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLPLSPISKTL 415 L+A+IE ++ W + A P W+ + G S W P Sbjct: 364 DALGCRLMAEIEDKEPGGAERAEIWRRREREAAAAPTWVCEACGATSGSWAPYCSACGAG 423 Query: 416 CYFEWKIPTKSPE 428 +W P PE Sbjct: 424 AAIQWTRPAHKPE 436 >gi|88607729|ref|YP_505844.1| hypothetical protein APH_1339 [Anaplasma phagocytophilum HZ] gi|88598792|gb|ABD44262.1| conserved domain protein [Anaplasma phagocytophilum HZ] Length = 412 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 78/404 (19%), Positives = 170/404 (42%), Gaps = 28/404 (6%) Query: 4 LIRYF--FVISLVICSFIIVSHYPEDVSI-TWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +I YF F++ + C F + + + + G + FV+ + FLF + Sbjct: 1 MITYFLIFIVVSLACGFAVQGYEGLALKLEVLGYSVEANVVFVVFMLCVLFLF----IVL 56 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R +C A+ + + + + K Y + ++ ++ RK+ +S++ + Sbjct: 57 VGRACFAC-ALCMYRVRRGSVSKKYDEVGKSFAFLSVGHVDNVRKIVG-ISERFAKFDSP 114 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ LLE + QY IA + ++ LQ + V L E R + R Sbjct: 115 VLQLLEGCASFRIGQYEIAEKHFSLIPSKALQEVDLGAWLVGILANEKSR----DCKLRV 170 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSL 234 ++ D+ W ++ + +W +T L +K + ++ N + LIAR Sbjct: 171 LSRLYDVFHSRRWSVLFRLEIARMEGQWDEVLTALKLIEKYGVSHPYDLND-LELIARC- 228 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + A+ M + + + +K + + A++ AK N ++A LE ++V+PHP+ Sbjct: 229 KLAELHYMQGDFKEGLGVIK-GSSGLQATLWRAKFNAKLNNVKRAMEELEAYYRVDPHPD 287 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A++Y ++ + + K L +N +S S +++ + +++ + A A+ Sbjct: 288 VASLYLSMVQDKNLAVEK----LNALNPDSYMSFLLMVRKYMDLKQYNAAEKHLKQALTQ 343 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISD 397 ++ ++ +I N D+I YW ++PD W + Sbjct: 344 YKYAGLYGMMLEI-MVRLGNLDEIEYWIDMMRRDSVPDMHWACE 386 >gi|197106863|ref|YP_002132240.1| hypothetical protein PHZ_c3402 [Phenylobacterium zucineum HLK1] gi|196480283|gb|ACG79811.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 504 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 15/260 (5%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G ++ A + AR++ + + LV +L Q A A + A ML Sbjct: 88 LSRGFLAAAGGDGSEARRLARKAADLAS-DAPGLVRVLAAQAAEAAGDLDEARAAYTAML 146 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P R L + G +A R+A +A + A W A+++ + A +W +A Sbjct: 147 GFPEMRLAGHKGLMQLAAAQGARETALRHAQEAYGEARTARWAWRALLEAKLEAGDWPQA 206 Query: 208 ITFLNQKKKN------AKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNS 259 + + E R + A LE+A K +A H A+E+ KL Sbjct: 207 LDLMKGALDRKIVPPVVAERARAALLAASAAQLEHAPEPKARALAMDH-AVEAAKLAPGF 265 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + AA+ L K +A +E W+V PHP + Y L ++ T +RA RL E Sbjct: 266 APGVVMAARLLAQAGKVGRAAATVENAWRVAPHPALWLAYRDLRTDET--PRERAQRLSE 323 Query: 320 ---INKESVESLVIVSKIAL 336 +N ESL++ + AL Sbjct: 324 LAAVNPTHRESLILHVERAL 343 >gi|56417190|ref|YP_154264.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries] gi|56388422|gb|AAV87009.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries] Length = 412 Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust. Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 23/229 (10%) Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA------KEWNRNRAIL 228 R + D+ APW ++ + +W + + K E + A L Sbjct: 169 RVLRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACL 228 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKI 286 ++ARS +GD E LKL + + A+I AK+ +KA LE Sbjct: 229 MLARSCYQ--RGDYK-------EGLKLVGRATDMHAAILKAKTHEKLGNPQKARDALEAC 279 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +K PHPEI Y + + RL +N + S+++ K + + A Sbjct: 280 YKTTPHPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQ 335 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLW 394 A A+ E++ L+A + A N D+++YW T+ ++P+ W Sbjct: 336 HAKRAIARYKYVELYCLMADV-MARIGNIDEVVYWITKMQKDSVPNMQW 383 >gi|254995360|ref|ZP_05277550.1| hypothetical protein AmarM_05429 [Anaplasma marginale str. Mississippi] Length = 411 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 23/229 (10%) Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA------KEWNRNRAIL 228 R + D+ APW ++ + +W + + K E + A L Sbjct: 168 RVLRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACL 227 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKI 286 ++ARS +GD E LKL + + A+I AK+ +KA LE Sbjct: 228 MLARSCYQ--RGDYK-------EGLKLVGRATDMHAAILKAKTHEKLGNPQKARDALEAC 278 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +K PHPEI Y + + RL +N + S+++ K + + A Sbjct: 279 YKTTPHPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQ 334 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLW 394 A A+ E++ L+A + A N D+++YW T+ ++P+ W Sbjct: 335 HAKRAIARYKYVELYCLMADV-MARIGNIDEVVYWITKMQKDSVPNMQW 382 >gi|222475555|ref|YP_002563972.1| hypothetical protein AMF_890 [Anaplasma marginale str. Florida] gi|255004673|ref|ZP_05279474.1| hypothetical protein AmarV_05254 [Anaplasma marginale str. Virginia] gi|222419693|gb|ACM49716.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 412 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 21/228 (9%) Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 R + D+ APW ++ + +W T L + K AK R I+L + Sbjct: 169 RVLRRLCDVFHRAPWAAMFRLEIARIEGDWD---TVLVEVKLAAK-----RGIVLPYKHE 220 Query: 235 ENADKGDMI---ASYH--DAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKIW 287 AD ++ + Y D E LKL + + A+I AK+ +KA LE + Sbjct: 221 RMADIACLMLARSCYQRGDYKEGLKLVGRATDMHAAILKAKTHEKLGNPQKARDALEACY 280 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 K PHPEI Y + + RL +N + S+++ K + + A Sbjct: 281 KTTPHPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQH 336 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW-TQSALHAMPDPLW 394 A A+ E++ L+A + A N D+++YW T+ ++P+ W Sbjct: 337 AKRAIARYKYVELYCLMADV-MARIGNIDEVVYWITKMQKDSVPNMQW 383 >gi|269958417|ref|YP_003328204.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel] gi|269848246|gb|ACZ48890.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel] Length = 412 Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust. Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 26/257 (10%) Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI--TFLNQKKKNAKEWNRNR----AIL 228 R + D+ PW T V+ + +W A+ T L ++ + R A L Sbjct: 169 RVLRRLCDVFRRVPWATMFKVEIARIEGDWDTALVETRLAARRGVVLPYKHERMGDVACL 228 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKAEVILEKI 286 ++AR+ +G+ Y E LKL + + A+I A RKA +LE Sbjct: 229 MLARAC--CQRGN----YR---EGLKLVEKVTDMHATILKATIHEKLGNLRKARDVLEVC 279 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +K PHPE+ Y +S++ ++ RL +N E S+++ + + + + A Sbjct: 280 YKTAPHPEVVTAYLA-VSQDQDAAME---RLSSLNAEHYVSMLLAIRRYVSVKQYNAAEQ 335 Query: 347 KAMLAMKIAPRKEIFLLLAQIE-QANSHNTDKILYWTQSALH-AMPDPLW-ISDDGYLSS 403 A A+ A K + L A +E A N D++ YW + ++P+ W ++ +SS Sbjct: 336 YAKRAL--AKYKYVELYCAMMEVMACIGNVDEVAYWLEKMRKDSLPNMQWRCTECCAVSS 393 Query: 404 VWLPLSPISKTLCYFEW 420 W + T +W Sbjct: 394 GWSHECSVCSTFDSIQW 410 >gi|307718566|ref|YP_003874098.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM 6192] gi|306532291|gb|ADN01825.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM 6192] Length = 305 Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 11/169 (6%) Query: 233 SLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 SL NA D+GD + ++L+ ++ A++ I + +AE +LE + + + Sbjct: 34 SLGNAYYDEGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYDRAEALLEGLLERD 93 Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P +A ++ +T R R E++ V L ++++ +E G +D+A Sbjct: 94 PVNTMVLSTLAYLFICKGDPDTAEDFYR--RALELSPGDVTILYNLARLRMEEGDVDEAL 151 Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP-DP 392 + A A +I+P +KE+ LL A + ++ ++ + ++AL + P DP Sbjct: 152 SYAGEAYEISPDKKEVLLLYAILRLESAPTDEEAVALGETALSSYPKDP 200 >gi|78033476|emb|CAJ30093.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1] gi|144901138|emb|CAM78002.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1] Length = 449 Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust. Identities = 90/439 (20%), Positives = 162/439 (36%), Gaps = 19/439 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSILYFFLFAWILLF 59 +LRLI +S V+ + + S V + W G + P ++ IL FL + L Sbjct: 2 LLRLIVLLIFMSPVVFATLWFSDNVGSVQVEWLGWHVDSNMPVLLAVILVVFLI-FSALS 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 +S P+ L R +KG AL L + + ++ R+ + ++ +N Sbjct: 61 RLSALVADLPSKLGKSRQARGLEKGMSALLAALDAAESGDVGEGRRFAAEAAR--LLNNP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L L+ + Q +A +LE R FA ++ Q + Sbjct: 119 GLAARLDRLLPRPPAQ-PVAPTRLEAA----KGRLFA-RKPGPPPPPTPVVDKIQPVVVE 172 Query: 180 ALDISPDAPWVTE-AVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSL 234 L +P P + + A EW A ++ + + R R++ L ++L Sbjct: 173 KLAAAPAGPSREDLEAFSAKIRAGEWGAAQAWIGEAVLAGRLTPLVAARWRSVALEGQAL 232 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 E A GD A E++ + ++ ++ +S+ +K +AE +L +W P Sbjct: 233 E-ASPGDPARPLRLAREAMAADQTFLPPALHVIRAEVSEGRKAEAETLLASVWPHVPARV 291 Query: 295 IANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + L E+ LKR L I + + + A + A M A+K Sbjct: 292 LLDACAPLWRDEDQDACLKRLEALAAIAPHHPDGHLAAGEAAFAVQKWGVARRHIMAALK 351 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKIL-YWTQSALHAMPDPLWISDD-GYLSSVWLPLSPI 411 IAP L+A+IE+ + + W + A P W+ + W P Sbjct: 352 IAPDALGCRLMAEIEEREPGGSARSAEIWRRREHEASLSPAWVCGACARVVEAWAACCPS 411 Query: 412 SKTLCYFEWKIPTKSPEYI 430 + EW K+ E + Sbjct: 412 CAGVATIEWTRSVKAEEAL 430 >gi|329765153|ref|ZP_08256735.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138356|gb|EGG42610.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 600 Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%) Query: 239 KGDMIASYHDAIES-------LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 KG ++ S + E+ L L +I A KSL+ N+ A ILE I N Sbjct: 142 KGKILLSKQNTSEAINQFYHVLDLEPENIEAKFYLGKSLVESNRIENAVKILESIVSNND 201 Query: 292 HPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 H E + + + N+ L +L E++ ++++ ++V KI + I++A A Sbjct: 202 HLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSPNNIDAHLLVGKINMNAKIINEALAHFE 261 Query: 350 LAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL-- 406 ++I+P E LLL QI + + +NTD+ L + L P+ + DG S + L Sbjct: 262 KVLEISPNNIEAHLLLGQI-KMDLNNTDEALAHFEKVLEISPNHM----DGLNSKIILLE 316 Query: 407 PLSPISKTLCYFE 419 L + + + Y E Sbjct: 317 KLGKVDEAIEYCE 329 >gi|167644094|ref|YP_001681757.1| HemY domain-containing protein [Caulobacter sp. K31] gi|167346524|gb|ABZ69259.1| HemY domain protein [Caulobacter sp. K31] Length = 515 Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust. Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 10/320 (3%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 +G +AL G +++AA + AR++ ++ L+ +L Q A A + A + Sbjct: 83 QGVEALSRGFLAVAAGDGSEARRLAQKAAELAE-DAPALIRVLAAQAAEAAGDHTAARQA 141 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 ML P R + L + GD A ++A A ++ A W A+++ + A Sbjct: 142 YNAMLGFPEMRLAGLRGLMQTALAEGDKGLALKHAETAYGLAKTARWAWRALLEARLEAG 201 Query: 203 EWSRAITFLNQKKKN------AKEWNRNRAILLIARSLENADKGDMIASYHD-AIESLKL 255 +W A+ + + E R + A SLE +D +A D A+++ +L Sbjct: 202 DWKAALDLVQGALERKIVPPLVAERARAALLAASAASLEESDDPKTLAQALDFAVQAARL 261 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRA 314 + + AA+ + K KA ++E WK++PHP + Y L SE + R Sbjct: 262 KPDFAPGVVMAARLQAADGKAAKAGSLIEAAWKLSPHPALWLAYRDLKTSETPKLRAARL 321 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 L + E+ ES ++ + AL G A A A L + + L++++ AN Sbjct: 322 AALAGLKPEARESRLLKVESALIGGDPVAARAAARLLPEEGLTARVAGLMSRVAYANGE- 380 Query: 375 TDKILYWTQSALHAMPDPLW 394 D+ W + A +P W Sbjct: 381 ADEARAWIARGVAAAQEPDW 400 >gi|307566128|ref|ZP_07628586.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307345316|gb|EFN90695.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 396 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%) Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 + +E L C N +M + + + + R+ I++ IWK+ P P T+ LS NT Sbjct: 316 NNVEELSFCINDMMPLMSNTQCKYDKGQIRR---IVQDIWKLTPAPNTLTYTTYQLSYNT 372 Query: 308 ---VGKLKRALRLEEINKESVESL 328 ++R R I KE ++SL Sbjct: 373 PQYYSPIRRTGRFYTITKEQLKSL 396 >gi|320451054|ref|YP_004203150.1| signAl transduction histidine kinase containing a receiver domain [Thermus scotoductus SA-01] gi|320151223|gb|ADW22601.1| signAl transduction histidine kinase containing a receiver domain [Thermus scotoductus SA-01] Length = 723 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 14/44 (31%), Positives = 28/44 (63%) Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 +A AK+L+ Q ++ +A+V+L + ++ PHPE+A + +L Sbjct: 678 LARFTLAKALLEQGRREEAKVLLREELRLRPHPEVAELLNRVLG 721 >gi|78224662|ref|YP_386409.1| response regulator receiver modulated metal dependent phosphohydrolase [Geobacter metallireducens GS-15] gi|78195917|gb|ABB33684.1| response regulator receiver modulated metal dependent phosphohydrolase [Geobacter metallireducens GS-15] Length = 479 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 22/120 (18%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQ-------QYVLAKEWSRAITFLNQKKKNAKEWNR 223 A RY TK PW E +VQ QY L +E R +N++ + KEWN Sbjct: 147 GGAYRYITK--------PWNDEELVQIIRDAVNQYRLVQENRRLTEIVNKQNEELKEWNE 198 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVI 282 N + ++ ++ E K + + ++ + S + ++ A LI KKR AE + Sbjct: 199 NLKVRVLEQTTEIRKKHENLKELNERLRS------NFKDTVTAFSRLIELGGKKRHAETV 252 >gi|294085039|ref|YP_003551799.1| HemY domain-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664614|gb|ADE39715.1| HemY domain protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 445 Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW-GNRL-YRTSPFVILSILYFFLFAWILL 58 ++RL F I S ++ P V + W G RL RTS V L I+ F + Sbjct: 2 LIRLAVLFLFILAAAASASWLAAQPGHVQVEWLGWRLEMRTSLAVALVII--FALGMVFF 59 Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97 + R S P L + KR G+KAL GLM+++A Sbjct: 60 DRLYRLIKSLPGWLGSSVQKRRDVAGHKALTLGLMAVSA 98 >gi|126314383|ref|XP_001376560.1| PREDICTED: similar to transient receptor potential M8 protein [Monodelphis domestica] Length = 1341 Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 931 KIILCLFLIPLVGCGFVSFRKKPMDRHRRLIWSYLAFFTSPFVVFSWNVVFYIAFLLLFA 990 >gi|219121447|ref|XP_002185947.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582796|gb|ACI65417.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1133 Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 18/181 (9%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNR 223 G+ A+ + + L + A EAV ++Y A+ W RA+ F+ KK+ EW R Sbjct: 303 GESTLARHTSRRGLGMKVLANAKKEAVEKEYQRAQTWKDYPIRALRFVGILKKDNAEWRR 362 Query: 224 NRAILLIARS------LENADKGDMIASY--HDAIESLKLCDNSIMASICAAKSLISQNK 275 A I R+ + D+GD ++ Y +D + N+ M KS++S Sbjct: 363 QLAATKIQRAWRAVLFQRHCDEGDDVSGYVSNDYAWKARSAGNNAMEKALKKKSILSHFN 422 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 + + IL + +++++ S NT L+R EE+ S + ++A Sbjct: 423 QMNSRGILIASGGIQ---KVSDVTVVTESTNT---LRRGPSREELKVGSAMRELTGQRVA 476 Query: 336 L 336 L Sbjct: 477 L 477 >gi|332707120|ref|ZP_08427178.1| glycosyltransferase [Lyngbya majuscula 3L] gi|332354145|gb|EGJ33627.1| glycosyltransferase [Lyngbya majuscula 3L] Length = 1933 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVY 158 +P + + H Q VYL + Q L +RQ+ A E ++I P T + VY Sbjct: 151 VPSSSERHCKQYQSGGLLEAVTVYLQQAQTYLKQRQWQQAIAACERAIKIAPDTAQ--VY 208 Query: 159 SLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 ++ + + +G A Y +AL+I PD V + Y ++W AI + Sbjct: 209 KIWGNALQFMGQTTEAMGYYGQALEIEPDFAEVYANLGSLYAGQQDWQHAIAY 261 >gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa] gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa] Length = 492 Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 8/123 (6%) Query: 89 YTGLMSIAAHNIPLARKMHSY---VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 Y ++S H + L K SY ++++H L Y V I + + HE E+ Sbjct: 304 YVAVLSACVH-VGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDIL---GRGGLVHEAHEL 359 Query: 146 MLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 M ++P +++ SCRI G+L A+ A ++ PD + Y +K+W Sbjct: 360 MTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKW 419 Query: 205 SRA 207 A Sbjct: 420 EEA 422 >gi|68489060|ref|XP_711643.1| hypothetical protein CaO19.13713 [Candida albicans SC5314] gi|68489199|ref|XP_711574.1| hypothetical protein CaO19.6356 [Candida albicans SC5314] gi|46432887|gb|EAK92350.1| hypothetical protein CaO19.6356 [Candida albicans SC5314] gi|46432961|gb|EAK92421.1| hypothetical protein CaO19.13713 [Candida albicans SC5314] Length = 911 Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 7/88 (7%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + +LQ P E VY + FE RIG+L+S Q KAL P PW+ ++ ++ K Sbjct: 734 QAILQNPNNPEIWVYKIQFEK-RIGNLSSLQNLTNKALKQFPTDPWL--WIINLSLIPKM 790 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIA 231 R FL+ K N + ILLI+ Sbjct: 791 SQRKTIFLDA----LKATNNSNLILLIS 814 >gi|290542313|ref|NP_001166561.1| transient receptor potential cation channel subfamily M member 8 [Cavia porcellus] gi|255689716|gb|ACU30144.1| transient potential cation channel subfamily M member 8 [Cavia porcellus] Length = 1104 Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWNYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|311273292|ref|XP_003133798.1| PREDICTED: transient receptor potential cation channel subfamily M member 8-like [Sus scrofa] Length = 1104 Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPLDKRRQLLWSYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|332995108|gb|AEF05163.1| heme biosynthesis protein [Alteromonas sp. SN2] Length = 390 Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust. Identities = 80/391 (20%), Positives = 152/391 (38%), Gaps = 33/391 (8%) Query: 9 FVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSC 68 F+++L++ I+ V I+ GN TS I+ + +W ++ + + LS Sbjct: 14 FIVALIVGPMILGDKGY--VLISLGNTAIETSLIGFCIIIICAIISWYIISKLVLWTLSL 71 Query: 69 PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 K +A Y GL S+AA ++ + H +SQ E + YL Q Sbjct: 72 VTGSHRWFGALGERKRKRAFYHGLQSLAAGDL---KSAHKALSQTTNGDFEGVNYLAAAQ 128 Query: 129 IA-------------LAERQYNIAHEKLEM-MLQIPATREFAVYSL-YFESCRIGDLNSA 173 +A L +Y+ A + M +I + +L +S + N+ Sbjct: 129 VAQSQNDPQKARYFLLQAAEYDSAKVAATIVMARIDVSEGKYTDALEKLDSLDEEEANNP 188 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 Q KA ++ W T +Q+ + W +A+ K++ W++ A +A Sbjct: 189 QVIQLKASIMAEQGQWQT---LQEKLSG--WRKALP-----KEDYTAWSQRIAKGKLAEI 238 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 ++ + +K D A I + L+ Q +A+ +L + K PHP Sbjct: 239 ASKNGAAELKTHWEGLPRKIKQDDAYRAAYI---QQLLEQGMHAEAQTLLVEWQKRGPHP 295 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +T L N L+ + + E+VE + ++A G A + A+K Sbjct: 296 ALFPYFTQLNIPNAAPSLRLLESWIKQDSENVELYSTLGRVAFNAGDDILAEKVLLKAVK 355 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 + K+ LLL+ I + +T + Y+ + Sbjct: 356 MESNKDDLLLLSAISERRHDSTTALQYYKEG 386 >gi|209886536|ref|YP_002290393.1| TPR repeat protein [Oligotropha carboxidovorans OM5] gi|209874732|gb|ACI94528.1| TPR repeat protein [Oligotropha carboxidovorans OM5] Length = 267 Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 36/71 (50%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 ++G + A+RY AL I PD P V + YVL KE RA L + ++ A +R R Sbjct: 149 QMGKPDEARRYYANALKIRPDEPSVLSNLGMSYVLTKELPRAEATLRRAQQLAPNDSRIR 208 Query: 226 AILLIARSLEN 236 L +A L+ Sbjct: 209 QNLGLALGLQG 219 >gi|238878343|gb|EEQ41981.1| hypothetical protein CAWG_00175 [Candida albicans WO-1] Length = 912 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + +LQ P E VY + FE RIG+L+S Q KAL P PW+ ++ ++ K Sbjct: 735 QAILQNPNNPEIWVYKIQFEK-RIGNLSSLQNLTNKALKQFPTDPWL--WIINLSLIPKM 791 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLI 230 R FL+ K N + ILLI Sbjct: 792 SQRKTIFLDA----LKATNNSNLILLI 814 >gi|110597057|ref|ZP_01385346.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] gi|110341248|gb|EAT59713.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] Length = 573 Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 153 REFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 R VY L +S + D A+RY KA P P + EA+V Y++ KE+ +A + + Sbjct: 327 RNGGVYLLRGQSMLQRQDAQGAERYFLKARSFVPGNPVIEEALVSAYIMQKEFRKASSII 386 Query: 212 NQKKK 216 + KK Sbjct: 387 VRAKK 391 >gi|149711231|ref|XP_001499536.1| PREDICTED: similar to transient receptor potential cation channel, subfamily M, member 8 [Equus caballus] Length = 1104 Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C FI P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVACGFISFRKKPIDKHKKLLWYFVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|291410435|ref|XP_002721500.1| PREDICTED: transient receptor potential cation channel, subfamily M, member 8 [Oryctolagus cuniculus] Length = 1171 Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHRRLLWHYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|332815773|ref|XP_003309583.1| PREDICTED: transient receptor potential cation channel subfamily M member 8 [Pan troglodytes] Length = 1062 Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 652 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 711 >gi|297669766|ref|XP_002813060.1| PREDICTED: transient receptor potential cation channel subfamily M member 8-like [Pongo abelii] Length = 1104 Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|183396434|gb|ACC62111.1| transient receptor potential cation channel, subfamily M, member 8 (predicted) [Rhinolophus ferrumequinum] Length = 1037 Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 643 KIILCLFIIPLVGCGFVSFRKKPMDKPRKLLWHYVAFFTSPFVVFSWNAVFYIAFLLLFA 702 >gi|281182712|ref|NP_001162392.1| transient receptor potential cation channel subfamily M member 8 [Papio anubis] gi|162415923|gb|ABX89284.1| transient receptor potential cation channel, subfamily M, member 8 (predicted) [Papio anubis] Length = 1104 Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|332259049|ref|XP_003278601.1| PREDICTED: transient receptor potential cation channel subfamily M member 8 [Nomascus leucogenys] Length = 1104 Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|32966583|gb|AAP92167.1| transient receptor potential subfamily M member 8 variant [Homo sapiens] Length = 1104 Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|109689695|ref|NP_076985.4| transient receptor potential cation channel subfamily M member 8 [Homo sapiens] gi|143811469|sp|Q7Z2W7|TRPM8_HUMAN RecName: Full=Transient receptor potential cation channel subfamily M member 8; AltName: Full=Long transient receptor potential channel 6; Short=LTrpC-6; Short=LTrpC6; AltName: Full=Transient receptor potential p8; Short=Trp-p8 gi|72537227|gb|AAZ73614.1| transient receptor potential subfamily M member 8 [Homo sapiens] gi|119591474|gb|EAW71068.1| transient receptor potential cation channel, subfamily M, member 8, isoform CRA_b [Homo sapiens] Length = 1104 Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|20147036|gb|AAM10446.1| transient receptor potential cation channel protein [Homo sapiens] Length = 1104 Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|19570794|dbj|BAB86335.1| LTRPC6 [Homo sapiens] Length = 1095 Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 685 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 744 >gi|169409477|gb|ACA57875.1| transient receptor potential cation channel, subfamily M, member 8 (predicted) [Callicebus moloch] Length = 1104 Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|296205933|ref|XP_002749959.1| PREDICTED: transient receptor potential cation channel subfamily M member 8 [Callithrix jacchus] gi|166064935|gb|ABY79104.1| transient receptor potential cation channel, subfamily M, member 8 (predicted) [Callithrix jacchus] Length = 1104 Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPVDKHKKLLWYYVAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|226875253|gb|ACO88994.1| transient receptor potential cation channel, subfamily M, member 8 (predicted) [Dasypus novemcinctus] Length = 1104 Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDV--SITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++I F+I LV C F+ P D + W + TSPFV+ S F A++LLFA Sbjct: 694 KIILCLFIIPLVGCGFVSFRKKPIDKHKRLLWYYMAFFTSPFVVFSWNVVFYIAFLLLFA 753 >gi|313885849|ref|ZP_07819590.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924678|gb|EFR35446.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica PR426713P-I] Length = 391 Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 21/195 (10%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASIC 265 AI + + K N + +N ++A++ +E D + I + E LKL S+ Sbjct: 195 AIKYGEELKGNG--YRQNEVYQILAQTYIEEGDTANYITTMQ---EGLKLFPKEPYYSVN 249 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE-NTVGKLKRALRLEEINKE 323 + I QNK +A L + ++NP +P++ ++ L E N +K + E++ Sbjct: 250 LINTYIVQNKYDEARTFLAQAIELNPENPQLYDVMGKLYEESNEEEAIKWFSKALEVDPN 309 Query: 324 SVESLVIVSKI----ALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIEQANSHNTD 376 VESL + +I A+E+ ++ M A +K LL L +++A S N D Sbjct: 310 YVESLCNIGRIYYNKAVEVSDKEEG------GMAAAQKKRTALLNKALPYLQKAYSINPD 363 Query: 377 KILYWTQSALHAMPD 391 Y + +A+ D Sbjct: 364 ASYYLLGNIYYALGD 378 >gi|332300697|ref|YP_004442618.1| Tetratricopeptide TPR_1 repeat-containing protein [Porphyromonas asaccharolytica DSM 20707] gi|332177760|gb|AEE13450.1| Tetratricopeptide TPR_1 repeat-containing protein [Porphyromonas asaccharolytica DSM 20707] Length = 400 Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 21/195 (10%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASIC 265 AI + + K N + +N ++A++ +E D + I + E LKL S+ Sbjct: 204 AIKYGEELKGNG--YRQNEVYQILAQTYIEEGDTANYITTMQ---EGLKLFPKEPYYSVN 258 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE-NTVGKLKRALRLEEINKE 323 + I QNK +A L + ++NP +P++ ++ L E N +K + E++ Sbjct: 259 LINTYIVQNKYDEARTFLAQAIELNPENPQLYDVMGKLYEESNEEEAIKWFSKALEVDPN 318 Query: 324 SVESLVIVSKI----ALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIEQANSHNTD 376 VESL + +I A+E+ ++ M A +K LL L +++A S N D Sbjct: 319 YVESLCNIGRIYYNKAVEVSDKEEG------GMAAAQKKRTALLNKALPYLQKAYSINPD 372 Query: 377 KILYWTQSALHAMPD 391 Y + +A+ D Sbjct: 373 ASYYLLGNIYYALGD 387 Searching..................................................done Results from round 2 >gi|254781033|ref|YP_003065446.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040710|gb|ACT57506.1| HemY domain-containing protein [Candidatus Liberibacter asiaticus str. psy62] Length = 492 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 492/492 (100%), Positives = 492/492 (100%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA Sbjct: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY Sbjct: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA Sbjct: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG Sbjct: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT Sbjct: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI Sbjct: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW Sbjct: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEW 420 Query: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH Sbjct: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480 Query: 481 IRQPDDPGIKEQ 492 IRQPDDPGIKEQ Sbjct: 481 IRQPDDPGIKEQ 492 >gi|254486881|ref|ZP_05100086.1| HemY domain protein [Roseobacter sp. GAI101] gi|214043750|gb|EEB84388.1| HemY domain protein [Roseobacter sp. GAI101] Length = 502 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 107/505 (21%), Positives = 200/505 (39%), Gaps = 21/505 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +++++ + I+ + + + +T + P +++I+ + W+ Sbjct: 5 LIKIVVFVVAIAALTWGASFLLESSGGLQVTVMGTEFSFGPLQSVIAIIVLVIAVWLVLK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL AV F L + KGY+AL GLM++A+ LA + Sbjct: 65 IISLLIAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRLA--LSKAAKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E + ++ +TR V + + GD ++A Sbjct: 123 KYLERPELTNLLIAQAAEMAGDKRKAEETYKKLVANESTRFVGVRGILKQKLAEGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA + P + +++ ++WS A LN K KN R A+L Sbjct: 183 LKLAEKAFALKPKHADTGDILLKLQAEKEDWSGARETLNTKLKNGQLPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + +G I + AIE+ +L + I A++ AA S I Q K + A +L+K W V Sbjct: 243 LSEAKDVFTEGHSIEAREAAIEANRLSPDLIPAAVMAAHSYIDQGKPKYAARLLKKAWSV 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + HP++A+ + + + T +LKR L + E+ ++++++ + +A Sbjct: 303 HAHPDLASAFAAIAPDETPKERLKRFTALTRTQPDDPETKMLLAELNIANEDFPEARRSL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 ++ P L+A IE+ + + W AL P WI D+ ++ + W P Sbjct: 363 GNLVETDPTARSVTLMAAIERGEGASDTVVKGWLARALTVSRGPQWICDNCQHIHTNWKP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + WK P S + L + D N+G P + Sbjct: 423 ICDNCHSFDTLAWKTPPMSEVAMPGGVQMLPLIVGAIED------NSGADAKPPVATRAD 476 Query: 468 SFEDSTIHPLDPHIRQPDDPGIKEQ 492 E I D +P +P + + Sbjct: 477 IEEAELIVDTDEVSEKPKEPEVTTE 501 >gi|163745151|ref|ZP_02152511.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45] gi|161381969|gb|EDQ06378.1| hypothetical protein OIHEL45_06170 [Oceanibulbus indolifex HEL-45] Length = 501 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 104/498 (20%), Positives = 202/498 (40%), Gaps = 17/498 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 +++++ + +++ + + + +T Y P ++++L W+LL Sbjct: 5 LIKIVLFVVLVAALAWGAGFLLESQGGIQLTVAGTEYTLGPLQSVIAVLLLMFAVWVLLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A F L + KGY+AL GLM++A+ +A M Sbjct: 65 IVALLSATWHFLNGDETALSRYFDRNRERKGYEALSDGLMALASGEGQVA--MAKAAKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A +++ TR V + + GD +A Sbjct: 123 RYLKRPALTNLLTAQAAELAGDRRKAERTYRKLVEDEKTRFVGVRGIMKQKLADGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA + P + +++ +W+ A L K KN R A+L Sbjct: 183 LKLAEKAFALKPKHEETGDTLLKLQADKHDWTGARQTLQAKYKNGHLPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + E +G+ I + AIE+ +L + + A++ AA+S I+Q+K R A +L+K W V Sbjct: 243 LSEAREVIAEGNSIEAREAAIEANRLSPDLVPAAVMAARSYIAQDKPRYASKVLQKAWSV 302 Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +PHP++A + + + T ++KR L + + E+ ++++++ + +A Sbjct: 303 HPHPDLAAAFAEVQPDETPQQRIKRFRALTKSQPDHPETKMLLAELHIANEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 ++ P L+A IE+ + + W AL+ P WI ++ + + + W P Sbjct: 363 GNLVETDPSARSVTLMAAIERGEGASDTVVKGWLTRALNVSRGPQWICENCHHIHAEWKP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + K+ EWK P S + S L + P + + + + V+ Sbjct: 423 ICENCKSFDTLEWKTPPLSEVAMPSGVQMLPLIVGTPETTPAEGALATRTDDIEEAELVT 482 Query: 468 SFEDSTIHPLDPHIRQPD 485 ++ T D R PD Sbjct: 483 DPDEPTN--SDASKRAPD 498 >gi|84501232|ref|ZP_00999437.1| HemY domain protein [Oceanicola batsensis HTCC2597] gi|84390523|gb|EAQ03011.1| HemY domain protein [Oceanicola batsensis HTCC2597] Length = 502 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 107/500 (21%), Positives = 191/500 (38%), Gaps = 17/500 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 ++++I + +++ + V I G +P +++ + L W+ Sbjct: 5 LVKIIVFVALVAAATLGASYLLDMQGGVLIAMGGIEINLTPIKAVIAAVLLVLAVWLFLK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A+ RF L + KGY+AL GLM++A+ A M + Sbjct: 65 LFGLLIALLRFINGDETALSRYFDRNRERKGYEALSDGLMALASGEGRRA--MSKASRAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A + A + +L TR V + + GD ++A Sbjct: 123 RFLDRPDLTTLLTAQAAEMVGDKDKAEAAYKKLLSDDRTRFVGVRGIMKQKLAAGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A KA I P V + +++ +W A L K ++ R A+L Sbjct: 183 LALAEKAFAIKPGHEEVQDTLLRLQAQRSDWKGARATLKAKLRHGNLPRDVHRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + I S AIE+ KL + I A++ AA+S I Q +KR A +L+K W+ Sbjct: 243 LSEAKGVFSEDGTIESREAAIEANKLSPDLIPAAVMAARSYIDQGQKRYAARVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +LKR +L + ES ++++++ + +A Sbjct: 303 APHPDLAAAFAEIEPDETPQERLKRFQQLVKSAPNHRESRLLMAELNIAAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 P ++A IE+ + W A+ A P W ++ ++ + W P Sbjct: 363 GDLASENPDARTLTIMAAIERGEGAPDAIVKGWLARAVSAPRGPQWTCENCHHIHAHWQP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + WK P L + D + + S Sbjct: 423 ICDNCGAFDTLAWKTPPMGEAQAPVGTAMLPLIVGQIEDWGADAPDRPDREDEDMPS--S 480 Query: 468 SFEDSTIHPLDPHIRQPDDP 487 ED+ I P DP ++P+ P Sbjct: 481 EPEDAEILPSDPPSQEPEKP 500 >gi|83941980|ref|ZP_00954442.1| HemY domain protein [Sulfitobacter sp. EE-36] gi|83847800|gb|EAP85675.1| HemY domain protein [Sulfitobacter sp. EE-36] Length = 503 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 105/501 (20%), Positives = 196/501 (39%), Gaps = 17/501 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +++++ + VI+ + + + +T Y P +++++ + WI Sbjct: 5 LIKIVVFVAVIAAITWGASFLLESSGGLQVTVMGTEYSFGPLQSVIAVVLLIVAVWIMLK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL AV F L + KGY+AL GLM++A+ L M Sbjct: 65 IFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRL--AMAKAAKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E ++ TR V + + GD +A Sbjct: 123 KYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA I P + +++ ++W+ A LN K KN R A+L Sbjct: 183 LKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + +G+ I + AIE+ +L + I A++ AA I Q K + A +L+K W V Sbjct: 243 LSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLKKAWDV 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +LKR L + + E+ ++++++ + QA Sbjct: 303 QPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQARRSL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 ++ P L+A IE+ + + W AL P WI D+ ++ + W P Sbjct: 363 GDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIHASWKP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGK--KNHLPSIKK 465 + + WK P S + L + D+ + + + + Sbjct: 423 ICENCHSFDTLAWKTPPMSEVAMPGGVQMLPLIVGALEDNSGADAKPPVATRADIEDAEL 482 Query: 466 VSSFEDSTIHPLDPHIRQPDD 486 + + P++ QP+ Sbjct: 483 IDDTPAGAVDPVEKPATQPEK 503 >gi|83953029|ref|ZP_00961751.1| HemY domain protein [Sulfitobacter sp. NAS-14.1] gi|83841997|gb|EAP81165.1| HemY domain protein [Sulfitobacter sp. NAS-14.1] Length = 503 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 104/501 (20%), Positives = 195/501 (38%), Gaps = 17/501 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-------VILSILYFFLF 53 +++++ + VI+ + + + +T Y P +++ ++ L Sbjct: 5 LIKIVVFVAVIAAITWGASFLLESSGGLQVTVMGTEYSFGPLQSVIAVVLLVVAVWIMLK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + LL AV F L + KGY+AL GLM++A+ L M Sbjct: 65 IFALLVAVWHFLNGDETALSRYFDRNRERKGYEALSEGLMALASGEGRL--AMAKAAKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E ++ TR V + + GD +A Sbjct: 123 KYLERPDLTNLLIAQAAEMAGDRRKAEETYRKLVTNERTRFVGVRGIMKQKLAEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA I P + +++ ++W+ A LN K KN R A+L Sbjct: 183 LKLAEKAFAIKPKHAETGDVLLKLQAEKEDWAGARQTLNTKLKNGQMPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + +G+ I + AIE+ +L + I A++ AA I Q K + A +L+K W V Sbjct: 243 LSEAKDVIAEGNSIEAREAAIEANRLSPDLIPAAVMAAHGYIDQGKPKYAARVLKKAWDV 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +LKR L + + E+ ++++++ + QA Sbjct: 303 QPHPDLAGAFAAIQPDETPKERLKRFTTLTRVQPDHPETKMLLAELNIAAEDFPQARRSL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 ++ P L+A IE+ + + W AL P WI D+ ++ + W P Sbjct: 363 GDLVETDPTARSVTLMAAIERGEGASDTIVKGWLARALTVSRGPQWICDNCQHIHASWKP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGK--KNHLPSIKK 465 + + WK P S + L + D+ + + + + Sbjct: 423 ICENCHSFDTLAWKTPPMSEVAMPGGVQMLPLIVGALEDNSGADAKPPVATRADIEDAEL 482 Query: 466 VSSFEDSTIHPLDPHIRQPDD 486 + + P++ QP+ Sbjct: 483 IDDTPAGAVDPVEKPATQPEK 503 >gi|315122373|ref|YP_004062862.1| HemY domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495775|gb|ADR52374.1| HemY domain-containing protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 487 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 290/480 (60%), Positives = 368/480 (76%), Gaps = 4/480 (0%) Query: 14 VICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLF 73 +ICSFI +S+YP+D+ +TWGNR+Y+TSPFV+LSI+Y +F ++L+ +SRFFLSCP+ + Sbjct: 1 MICSFIAISYYPDDIYVTWGNRIYQTSPFVMLSIVYILIFTFMLISKISRFFLSCPSTIA 60 Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 ++ HKRNY KGYK L GL+SI A NIPLARKM SY+S +H FHNE L +LLE QIAL+E Sbjct: 61 NIFHKRNYAKGYKELSAGLISITAQNIPLARKMFSYLSHRHIFHNESLFHLLEAQIALSE 120 Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++++IA EK EMMLQIP TREFA+Y+LY E RIGDL SAQ YA KAL ISP W EA Sbjct: 121 KKHHIAREKFEMMLQIPETREFAIYNLYCEFYRIGDLKSAQCYAKKALKISPYISWGIEA 180 Query: 194 VVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q Y L KEWS+AI FLN+ KK N + +N ++AILL ARSLENA+KGD++ASY+DA+ Sbjct: 181 MLQYYALEKEWSKAIDFLNKNKKYENIETYNHHQAILLTARSLENAEKGDVVASYNDAMV 240 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 LKLC +SIMASICAAK+LI QNKK KA V+LEKIW++NPHPEIA IYT +LS N ++ Sbjct: 241 VLKLCKHSIMASICAAKALILQNKKNKAAVVLEKIWEINPHPEIAYIYTIILSNNATERM 300 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 RAL+LE INK+++ESL+ V+KI+LE G+I QA KAMLA K PRK IFLLLA+IE+A+ Sbjct: 301 NRALKLEAINKKNIESLITVAKISLETGNIQQAQTKAMLAAKANPRKGIFLLLAKIERAS 360 Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS 431 S+N DKILYWTQ AL+ PDPLWISDDGY SS WLPLSP SK LC FEWK+P K PEY + Sbjct: 361 SNNLDKILYWTQRALYTEPDPLWISDDGYCSSTWLPLSPTSKKLCRFEWKVPAKIPEYTT 420 Query: 432 SEN-INFSLEMAYPADDLQSMLNNGKKNHLPSI-KKVSSFEDSTIHPLDPHIRQPDDPGI 489 +++ I++ + ++ N KN PSI + ++ I LDP IRQPDDPG+ Sbjct: 421 NKDLISYDESETFMTHLQETKRNKNIKNPYPSIHQDYHHPKNRNILSLDPSIRQPDDPGV 480 >gi|240851346|ref|YP_002972749.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup] gi|240268469|gb|ACS52057.1| hypothetical DNA-binding protein [Bartonella grahamii as4aup] Length = 519 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 141/510 (27%), Positives = 248/510 (48%), Gaps = 22/510 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ +F V+++ +T+ + + S +LS+L +LL+ Sbjct: 1 MIRVFIYTFVVCILGLAFAWVANHNGIFVLTFLHFRFSASLLTVLSVLILLFVTLVLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + FF S P+ L + L+KR+ +GY+AL G+++ A + +A+KM + V++ E Sbjct: 61 LLSFFFSLPSALSNYLYKRHKKRGYEALSKGILATFAGDSMVAQKMEAQVAKYLAGKQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV LL+ Q + A E M + +T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LVKLLQAQTLSLQNNSVRAIGLYEGMRKEDSTKLVGLYGLFCEAMKSKAYEAAQQYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233 L +SP W +AV+ + +W +A+ + +K E + +LL ++ Sbjct: 181 LTLSPALLWAHQAVLDRLSTEGKWDKALAIFERAQKALPRSVRATPERQHIQVLLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L D + + +++ KL + + + AA L N+ RKA+ ++ W+ +PHP Sbjct: 241 LSLFD-THPVQAREAILKAHKLAPDFVPIIVIAADILYKLNETRKADKMIIAAWQKDPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++A +Y E +G+LKRA L NK++ ES +++K AL+ G A +A A++ Sbjct: 300 DLAALYLE-REEGAIGRLKRARTLASYNKDAFESAFLIAKAALDAGETAIAREQAKKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 PR+ ++LLLA IE+A +N + W AL A DP+W+ DG + S W +SPIS Sbjct: 359 YHPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMC-DGSIFSSWSAVSPISG 417 Query: 414 TLCYFEWKIPTKSPEY-ISSENINFSLEMAYPADDLQSMLNNGKKNHLPS---------- 462 L FEWK P P + ++NI + + + K L Sbjct: 418 RLGGFEWKAPPCMPSLTLEADNIVPKKQDKEYVTGKSDGVEDKKLEKLTPIDDSLLHNVQ 477 Query: 463 IKKVSSFEDSTIHPLDPHIRQPDDPGIKEQ 492 ++K E H+ DDPG+K + Sbjct: 478 VEKQDIKEQDVKMFSQTHL-NVDDPGVKTE 506 >gi|319899462|ref|YP_004159559.1| hypothetical protein BARCL_1326 [Bartonella clarridgeiae 73] gi|319403430|emb|CBI76998.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 514 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 130/471 (27%), Positives = 215/471 (45%), Gaps = 12/471 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ F ++ + IT+ + S I+S L L + L+ Sbjct: 1 MIRIFIYVFVVCVIGAVFSWCANNNSFLVITFLQMRFTVSLLTIVSGLVILLAILVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ + +G KAL GL++ A + A+KM + E Sbjct: 61 FFRIIFSIPRSLYSFFSRHYQKQGGKALTQGLLAAFAGDYMTAQKMEVRALRYLVKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + T+ Y L+ E+ + AQ YA +A Sbjct: 121 LIKLLRAQILFLQKDSMNAIVLYEEMKKEELTKLAGFYGLFREAINTKAYDIAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233 L +SP W + V+ + +W++A+ ++ ++ E A+LL + Sbjct: 181 LALSPTLLWAQQFVLDRLSAEGKWNKALDVFHRAQRALPRSEHCTPERKYIHALLLSGLA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + ++ + +++ KL + + ++ A L + RKA+ I+ K W+ NPHP Sbjct: 241 LHFVE-TQLVEARKAILKAHKLMPDFVPITVIMADILYKLKEVRKADKIIIKAWQENPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +Y E+ VG+LKRA +L NK+ ES IV+K AL+ G ++ A A A+ Sbjct: 300 DFGTLYLR-REESAVGRLKRAKKLASYNKDIFESSFIVAKAALDAGELELARECAQKALT 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 PR+ ++LLLA IE+A ++ W AL A DP W DG S W +SPIS Sbjct: 359 YHPREGVYLLLADIEEAQGNDQG-SRQWLSLALRAERDPAWAC-DGSFFSSWSAVSPISG 416 Query: 414 TLCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSI 463 L FEWK+P + SP + +N+ E + + + SI Sbjct: 417 RLGRFEWKVPPRCSPITLEVDNMVLKKEDKKDTIYEKEAVKDKSFEKKSSI 467 >gi|121602299|ref|YP_988402.1| hypothetical protein BARBAKC583_0064 [Bartonella bacilliformis KC583] gi|120614476|gb|ABM45077.1| conserved hypothetical protein [Bartonella bacilliformis KC583] Length = 531 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 135/518 (26%), Positives = 240/518 (46%), Gaps = 31/518 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ Y F + ++ F V+++ V IT+ + S +LS+ L L++ Sbjct: 1 MIRVVVYSFAVCVLGALFGWVANHNSIVVITFLQTRFAISLLTLLSVSIVLLVMLALVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P L R KG +AL GL+++ + + A+KM + + ++E Sbjct: 61 LLRGLFFAPNALRRYFSTRRQKKGREALSQGLLAVFSGDYVTAKKMETCALKYLANNHEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL+ Q ++ A E M Q T+ +Y LY E+ + + +AQ YA +A Sbjct: 121 LMKLLQAQTLFLQKDSIRAIGFYEEMRQETPTKLAGLYGLYREAVAMKEDEAAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-------RAILLIARS 233 L +SP W +AV+ + +W +A+ + +K +R A+LL ++ Sbjct: 181 LALSPALLWAHQAVIDRLSAEGQWDKALDVFEKAQKALPRADRWTAERNYTYALLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L+ K + + +++ KL + + ++ A L N+ RKA+ I+ WK PHP Sbjct: 241 LQLF-KTHPVKARTAILKAHKLLPDFVPITVITADILYKSNEVRKADKIIFNAWKKEPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ Y E V +LK+A +L N+++ ES +V+K AL+ G ++ A +A A++ Sbjct: 300 DLGACYLK-NEERAVERLKKAKKLASYNEDTFESAFLVAKAALDAGEVEFAREQAQKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 + PR+ ++LLLA IE+A ++ + W AL A DP W+ DG L S W +SPIS Sbjct: 359 LHPRESVYLLLADIEEAQGNDQLLVRQWLSLALRAERDPTWMC-DGTLFSSWSAVSPISG 417 Query: 414 TLCYFEWKIPTKS-PEYISSENINFSL--EMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470 L FEWK P +S P + + I ++ + K+ + +++ Sbjct: 418 RLGCFEWKAPPRSLPLTLEIDPIEPKDVGDVGPMVLKNVDPVMAEKEEKEDVVTEITFVN 477 Query: 471 DSTIHPLDPHIR------------------QPDDPGIK 490 D ++ + P DDPG+K Sbjct: 478 DELLNEISPIKDGFLPQNSAKKKISNQTRLNVDDPGVK 515 >gi|110677862|ref|YP_680869.1| hypothetical protein RD1_0473 [Roseobacter denitrificans OCh 114] gi|109453978|gb|ABG30183.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 492 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 106/498 (21%), Positives = 193/498 (38%), Gaps = 28/498 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 ++++I + ++ + + + V + + SP +++ + W+ L Sbjct: 5 LIKIILFVVAVAALAMGAVYLLESEGGVQVQVMGTEFTFSPIQSVIAAVVLIFVVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A RF + + KG++AL GLM++A+ +A M+ + Sbjct: 65 LLSLLVACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MNKAAKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L LL Q A A E + ++ ATR V + + GD ++A Sbjct: 123 RYLNKPELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA I P V + +++ ++WS A L+ K K R A+L Sbjct: 183 LQLAEKAFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + I AIE+ KL + I A++ AA + QN+ R A +L+K W+V Sbjct: 243 LSEAKDILSDASSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWEV 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +PHP++A + + E ++KR + + I E+ E+ ++++++ + +A Sbjct: 303 HPHPDLAAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + L+A IE+ + W AL P WI D+ ++ W P Sbjct: 363 GDLAETDATARSVTLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHREWGP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 ++ WK P S EMA P L G P Sbjct: 423 FCENCESFDTLAWKTPPMS-------------EMAMPGGMQMLPLIVGALEEKPDETSGD 469 Query: 468 SFEDSTIHPLDPHIRQPD 485 ED+ I P P+ Sbjct: 470 IIEDAEIIPDSMDSAAPE 487 >gi|325294024|ref|YP_004279888.1| HemY domain protein [Agrobacterium sp. H13-3] gi|325061877|gb|ADY65568.1| HemY domain protein [Agrobacterium sp. H13-3] Length = 535 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 167/522 (31%), Positives = 262/522 (50%), Gaps = 34/522 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + ++ + F ++ P +SI W +L S V SI+ + A +L++ Sbjct: 1 MTRILTFVLIVLALGFGFSWLADRPGVLSIVWQGQLIEMSLMVAASIVAALVAAVMLVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + P R D+GY+AL TGL++ A N LARKM + + E Sbjct: 61 VVNAIWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+ Q L E +Y+ A K E M + P TRE + LY E+ R G +AQ+YA A Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAHEAAQQYAEDA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + +P PW +A ++ EW AI L+Q+K E R +A+LL A++ E Sbjct: 181 AEKAPYLPWAAQATLETRCRNGEWDDAIRLLDQQKAAGVIQRGEAERLKAVLLTAKAGEK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D + + DA ++LKL + + A++ AAKS + ++ RKA ++E +WK +PH +IA Sbjct: 241 LE-SDPVGAREDAKQALKLAKSLVPAALIAAKSYLREDNLRKAAAVMEPVWKNDPHSQIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++Y S +T +LKRA RLE + ++ESL V++ AL+ +A AKA A +I Sbjct: 300 DLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLL+A IE+A + + ++ YW AL A DP+W++ DG S WLP+SP++ L Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPVWVA-DGVTSEKWLPVSPVTGRL 418 Query: 416 CYFEWKIPT------------------------KSPEYISSENINFSLEMAYPADDLQSM 451 FEWK P ++P I E + + PA Sbjct: 419 DAFEWKAPFGQLEGPVEDLTIENAIAAAPARTEQAPTPIVVEVAPQPIVVTKPAPIEVKP 478 Query: 452 LNNGKKNHLPSIKKVSS---FEDSTIHPLDPHIRQPDDPGIK 490 + K P+ +V D+ P+ PDDPG+K Sbjct: 479 DVSTPKEKKPATNEVPVEARPADAKTEPVPFFGGAPDDPGVK 520 >gi|149912845|ref|ZP_01901379.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b] gi|149813251|gb|EDM73077.1| hypothetical protein RAZWK3B_02615 [Roseobacter sp. AzwK-3b] Length = 496 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 105/497 (21%), Positives = 197/497 (39%), Gaps = 28/497 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL--- 58 L+++ + ++S + V I +G + + +P + L + A LL Sbjct: 6 LKIVGFIALVSAATLGAAHLIEMEGGVRIVFGGQEFNLTPIKAVIALIVLVIALWLLLKL 65 Query: 59 ----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114 A +F + K +KG++AL G+M++A+ LA M + Sbjct: 66 VSLLVATLKFINGDETAISRYFDKNRQEKGFRALSEGMMALASGEGDLA--MSKASKAEK 123 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L LL Q A A + +L+ TR V L + GD +A Sbjct: 124 YLRKPDLTNLLTAQAAELSGDTRKAELVYKKLLKDDRTRFVGVRGLMRQKLAAGDTETAL 183 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230 + A A + P V +A+++ +W A LN K K R A+L + Sbjct: 184 KLAKTAFALKPRHGEVQDALLRLQAQTADWKGARETLNAKLKYGSLPRDLHKRRDAVLAL 243 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + + D+G I + AIE+ +L + + A++ AA+S ISQ KR A + +K W V+ Sbjct: 244 SEAKDVLDEGKDIEAREAAIEANRLSPDLVPAAVLAARSYISQGSKRYATRVTKKAWGVH 303 Query: 291 PHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP++A + + + T +LKR +L ++ ++ E+ ++ +++ L A Sbjct: 304 PHPDLAAAFAEIEPDETPAQRLKRFSKLIAMHPDNRETKLLKAELHLAAEDFPAARRALG 363 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPL 408 ++ P + ++A IE+ + + W AL A P W+ D+ ++ + W P Sbjct: 364 DLVETDPDARVLTIMAAIERGEGSSDAVVKGWLARALSAPRGPQWVCDNCQHIHAEWAPA 423 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 WK P S S+ L + G P+ ++ + Sbjct: 424 CDHCNAFDTLTWKTPPVSTMTTSTGIEMLPLIV-------------GAIEQKPTEEEQTE 470 Query: 469 FEDSTIHPLDPHIRQPD 485 + + + P+ Sbjct: 471 PDGDDVLDAEVVDETPE 487 >gi|254510666|ref|ZP_05122733.1| HemY domain protein [Rhodobacteraceae bacterium KLH11] gi|221534377|gb|EEE37365.1| HemY domain protein [Rhodobacteraceae bacterium KLH11] Length = 498 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 105/496 (21%), Positives = 201/496 (40%), Gaps = 16/496 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA------ 54 +L+++ + +I L+ + V IT Y P L +FA Sbjct: 5 LLKILVFVAIIGLLAMGAGFLMESSGGVQITVAGTEYTLGPLQSAIALGVLVFAVWLFFK 64 Query: 55 -WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F L + +GY+AL GLM++A+ +A M + Sbjct: 65 LLTLLVATLKFLNGDETALSRYFDRSREKRGYQALADGLMALASGEGRVA--MTKANKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L LL Q A A E + ++ +TR V + + GD +A Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKASETYKKLVANNSTRFVGVRGIMKQKLSEGDDETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KAL I P + ++ A++W+ A + LN K K + R A+L Sbjct: 183 LKLAEKALAIKPRHEETQDVLLNLQTRAQDWAGARSTLNSKLKAGYLPRDVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + D+ + AIE+ +L + + A+ AA++ I + K R A IL+K W+ Sbjct: 243 LSEAKDILDETASVEQQEHAIEANRLSPDLVPAAAMAARAYIEKGKPRAAAKILKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + + T ++KR L I+ +++E+ +I++++ + +A Sbjct: 303 QPHPDLAHAFAEAVPDETPEQRIKRFTALTRIHPDNMETRLILAELNIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 ++ + L+A IE+ + + W AL+A P W+ D+ + + + W P Sbjct: 363 GDVVEKQGDARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCDNCHDIQAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + W+ P ++PE S ++ + +D + Sbjct: 423 ICQNCGSFDTLSWQTP-QTPEIASVTGVHMLPLIVGALEDQSEPEAVEEAEEPEDTATED 481 Query: 468 SFEDSTIHPLDPHIRQ 483 E +RQ Sbjct: 482 VIEVHAEPATTEEVRQ 497 >gi|159185310|ref|NP_355592.2| hypothetical protein Atu2656 [Agrobacterium tumefaciens str. C58] gi|159140568|gb|AAK88377.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 538 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 165/525 (31%), Positives = 256/525 (48%), Gaps = 37/525 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + ++ + F ++ P +SI W +L S V SI+ + A +L++ Sbjct: 1 MIRILTFAVIVLALGFGFSWLADRPGALSIVWQGQLIEMSLMVAASIIAALVAAVMLIWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + P R D+GY+AL TGL++ A N LARKM + + E Sbjct: 61 VVNAVWTSPNAARRYFRARKRDRGYQALSTGLIAAGAGNAILARKMTARTQGLLSADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+ Q L E +Y+ A K E M + P TRE + LY E+ R G +AQ+YA A Sbjct: 121 LIHLLDAQADLIEGKYDEARRKFEAMARDPETRELGLRGLYIEARRQGAYEAAQQYAEDA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + +P PW +A ++ +W AI L+Q+K + E R +A+LL A++ E Sbjct: 181 AEKAPYLPWAAQATLENRCRNGQWDDAIRLLDQQKAASVIERGEAERLKAVLLTAKAGEK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D +++ DA +LKL + A++ AAKS + ++ RKA +LE +WK PHP+IA Sbjct: 241 LE-SDPVSAREDAKHALKLAKGLVPAALIAAKSYLREDNLRKAATVLEPVWKNEPHPQIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y S +T +LKRA RLE + ++ESL V++ AL+ +A AKA A +I Sbjct: 300 QLYVRARSGDTAIDRLKRAERLESLKPNNIESLFAVAQAALDAKEFAKARAKAEAAARIE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLL+A IE+A + + ++ YW AL A DP W++ DG +S WLP+SP++ L Sbjct: 360 PRESIFLLMADIEEAETGDQGRVRYWMAQALRAPRDPAWVA-DGIVSEKWLPVSPVTGRL 418 Query: 416 CYFEWKIP---TKSP--------------------------EYISSENINFSLEMAYPAD 446 FEWK P + P E A P + Sbjct: 419 DAFEWKAPFGQLEGPVEDLTIENAIAAAPARAEPAVKTIIVEAAPETRAEPKPAPATPIE 478 Query: 447 DLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIR-QPDDPGIK 490 + + +P V + P PDDPG+K Sbjct: 479 VKPIVSTAKENKPVPIEAPVGTDASDKKADAVPFFGGAPDDPGVK 523 >gi|163869275|ref|YP_001610531.1| hypothetical protein Btr_2583 [Bartonella tribocorum CIP 105476] gi|161018978|emb|CAK02536.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 520 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 138/514 (26%), Positives = 249/514 (48%), Gaps = 30/514 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ +F+ V+++ +T+ + + S +LS+L +LL+ Sbjct: 1 MIRVFIYTFVVCILGLAFVWVANHNGVFVLTFLHFRFSASLLTVLSVLTLLFVTLVLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + FF S P+ L + +KR +GY+AL G+++ A + +A+KM + V++ E Sbjct: 61 LLSFFFSIPSALSNYFYKRQRKRGYEALSKGILATFAGDSMVAQKMEARVAKYLAGKQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV L+ QI + A E M + T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LVKFLKAQILSLQNNSVRAISLYEEMRKEDPTKLVGLYGLFREAMKSKAYEAAQQYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233 L +SP W +AV+ + +W +A+T + +K E + +LL ++ Sbjct: 181 LTLSPALLWAHQAVLDRLGAEGKWDKALTVFERAQKALPRSVRSTPERQHIQVLLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + + + +++ KL + + +I AA L N+ RKA+ ++ W+ PHP Sbjct: 241 LHLFE-THPVQAREAILKAHKLAPDFVPITIIAADILYKLNETRKADKMIIAAWQKEPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ +Y E +G+LKRA L NK+ ES ++SK AL+ G A +A A++ Sbjct: 300 DLGTLYIE-REEGAIGRLKRAKTLASYNKDVFESAFLISKAALDAGETILAREQAQKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 PR+ ++LLLA IE+A +N + W AL A DP+W+ + G + S W +SPIS Sbjct: 359 YHPRESVYLLLADIEEAQGNNQGAVRQWLSLALRAERDPVWMCE-GSIFSSWSAVSPISG 417 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 L FEWK P + P ++ + D + ++ + ++K++ +DS Sbjct: 418 RLGCFEWKAPPRLPSLTLE-----AVNIVPKKQDKEDVVEESEGVEDKKLEKLTPIDDSF 472 Query: 474 IHPLDPHIR---------------QPDDPGIKEQ 492 +H + DDPG+K + Sbjct: 473 LHNAQVEKQDIKEQDAKTFSQIHLNVDDPGVKTE 506 >gi|255264670|ref|ZP_05344012.1| HemY domain protein [Thalassiobium sp. R2A62] gi|255107005|gb|EET49679.1| HemY domain protein [Thalassiobium sp. R2A62] Length = 484 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 87/481 (18%), Positives = 189/481 (39%), Gaps = 15/481 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 + +++ + +++ + + + + + S ++L + W+ Sbjct: 5 LFKILFFVAIVAALALGVERLMQIEGGAVVEIAGQEFELSVLHLVLGAIAIIFLVWLGFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F + ++ KG+ AL G+M++A+ +A + + Sbjct: 65 IFGLLVATFKFLNGDETAISRYFNRNRERKGFDALSDGMMALASGEGRVA--LAKASRAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A + + +L+ TR V + + + GD ++A Sbjct: 123 KYLERPELTNLLTAQAAEMAGDRVKAEQTYKRLLEDDRTRFVGVRGIMKQKLQAGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA + P + + +++ + +W+ A L+ K K+ R A+L Sbjct: 183 LKLAEKAFALKPKHVEIQDTLLKLQADSSDWAGARRTLSAKLKSGSLPRDVHRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + G+ I + AIE+ +L + I A++ AA+S I Q + R A +L+K W+ Sbjct: 243 LSEARDILGSGESIEAREAAIEANRLSPDLIPAAVMAARSYIEQGQPRYAARVLKKTWEA 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++ + + + T ++KR L + E+ ++++++ + +A Sbjct: 303 QPHPDLGAAFAEIAPDETPVARIKRFRALARAHPNHAETQMLMAELHIANEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 P ++A IE+ + + W AL A P WI D+ + + W P Sbjct: 363 GELATTEPTARSLAIMAAIERGAGADDAVVRGWLTRALSAPRGPQWICDNCSNIHAAWSP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + WK P + + L + P ++ + +++ S Sbjct: 423 TCDNCGSFDTLTWKTPPAGEVTMPAATEMLPLLVGTPQSEVVEDAVEVTHAEVIAVEDKS 482 Query: 468 S 468 Sbjct: 483 D 483 >gi|319406345|emb|CBI79982.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3] Length = 481 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 126/471 (26%), Positives = 209/471 (44%), Gaps = 14/471 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y F + + F S+ + IT+ + S I+S L L + L+ Sbjct: 1 MIRIFIYIFAVCAIGAVFSWGSNNNNFLVITFLQMRFTVSLLTIISGLVILLTILVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ R + G KAL GL+++ A + A+KM + E Sbjct: 61 FFRIIFSIPGTLYSFFSGRYQEYGRKALIQGLLAVFAGDYIAAQKMEIRALKYLVKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + T+ +Y L+ E+ + AQ YA +A Sbjct: 121 LIKLLRAQILSLQKDSMKAIALYEEMQKEEPTKLAGLYGLFREAINTKAYDVAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENA 237 L +SP W + V+ + +W++A+ ++ ++ ++ + R A Sbjct: 181 LALSPALSWAQQFVLDRLSAEGQWNKALDVFHRAQRALPHSDHYTSERKYTHALLLSGLA 240 Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + ++ + +++ KL + + ++ L + RKA+ ++ K W+ NPHP+ Sbjct: 241 LHLIETQLMEARKAILKAHKLMPDFVPITVIMVDILYRLKEVRKADKMIIKAWQKNPHPD 300 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +Y E+ VG+LKRA L NK+ ES IV+K AL+ G ++ A A A+ Sbjct: 301 FGTLYLR-REESAVGRLKRAKTLASYNKDIFESSFIVAKAALDAGELELAREYAQRALTY 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 PR+ ++LLLA IE+A + W AL A DP W DG W +SPIS Sbjct: 360 HPRESVYLLLADIEEAQGNGQG-SRQWLSLALCAERDPAWAC-DGSFFPFWSAVSPISGR 417 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 L EWK+P + P + MA +D + +N K S +K Sbjct: 418 LGRCEWKVPPRCPPITLEIDN-----MALKKEDKKGPVNEKKVIKDKSFEK 463 >gi|114765154|ref|ZP_01444298.1| HemY domain protein [Pelagibaca bermudensis HTCC2601] gi|114542429|gb|EAU45456.1| HemY domain protein [Roseovarius sp. HTCC2601] Length = 511 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 101/510 (19%), Positives = 197/510 (38%), Gaps = 23/510 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWI---- 56 +L++I + V++ + V + IT G + P + + + A Sbjct: 5 LLKIILFVAVVAALTLGAGYVMESQGGIQITAGGYEFNLGPLQSVIAVIVLVIALYVVFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL AV +F L + KGY+AL G++++++ LA M Sbjct: 65 LVSLLIAVLKFINGDDTALSRYFDRNRERKGYQALSEGMLALSSGEGKLA--MAKAQKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 H L LL Q A A E + ++ TR + + GD +A Sbjct: 123 RYLHRPGLTNLLTAQAAEMTGDTRKAEEVYKKLITNDETRFVGIRGMMKLKLAKGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A +A + P P + + ++Q +W A L+ K K+ + R A+L Sbjct: 183 LKLAERAFALKPKHPEIQDTLLQLQAQKHDWRGARQTLSAKLKHGSLPRDVYRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + + I + AI S K + I + AA++ I++ +++KA IL+K W V Sbjct: 243 LSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARAYIARGEQKKAVRILKKTWSV 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T ++KR + I + E+ ++ +++AL +A Sbjct: 303 QPHPDLAAAFAEIAPDETPAERMKRFRTITSIRPDHRETRLLRAELALAAEDFPEARRAM 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P ++A I + ++ W AL A P W+ D ++ W+P Sbjct: 363 GDLVDKEPDARTLTVMAAIARGEGAPETEVRGWLAKALVAPRGPQWVCDSCHHIHGEWVP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSI---- 463 + W P +S + + L + D + + P I Sbjct: 423 VCENCGGFDTLSWTTPPQS-DAAPAGAEMLPLIVGALEDTSKDESAQAEAEDAPEILTPN 481 Query: 464 ---KKVSSFEDSTIHPLDPHIRQPDDPGIK 490 ++ + + T+ + +P+ G K Sbjct: 482 PPTEEGKTAAEETVEDAEEVSDEPEKEGAK 511 >gi|49474780|ref|YP_032822.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse] gi|49240284|emb|CAF26758.1| hypothetical protein BQ12990 [Bartonella quintana str. Toulouse] Length = 518 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 139/509 (27%), Positives = 243/509 (47%), Gaps = 22/509 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ Y FV+ ++ +F V+++ + + IT+ + + S +LS+L FL + L+ Sbjct: 1 MTRVLIYTFVVCMLGLAFGWVANHNDVLIITFLHFRFSISLLTLLSVLILFLGILVFLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + S P L + +KR GY+AL G+++ A + A+KM + V + +E Sbjct: 61 LLSVLFSLPGTLSNYFYKRGQKLGYEALSQGVLAAFAGDGVAAKKMEARVVKYLAGKHEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV LL+ Q + A E M + T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LVKLLQAQALSLQNNSARAISLYEEMRKETPTKLAGLYGLFREAMKANAYEAAQQYAQEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIARS 233 L +SP W + V+ + W +A+ + +K + E +A+LL ++ Sbjct: 181 LALSPALLWAYQLVLDRLSAQGRWDKALDVFERAQKVLPRSVRSTPERQHVQALLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + + +++ +L + + ++ AA L N+ RKA+ ++ W+ NPHP Sbjct: 241 LHLF-RTHPTDARKVILKAHRLVPDFVPITVIAADILYKLNETRKADKMIIAAWQKNPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +Y E VG+LK+A L +K++ ES +V+K AL+ G A +A A++ Sbjct: 300 NLGALYLE-REEGAVGRLKKAKALASYSKDTFESAFLVAKAALDAGERVLAREQAQKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 R+ ++LLLA IE+A +N + W AL A DP+W+ DG + S WLP+SPIS Sbjct: 359 YHRRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWLPVSPISG 417 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 L FEWK P P + L D M N ++ L + + + ++ Sbjct: 418 RLGRFEWKAPPSPPPLTLETDNTIVLTKKSQEDKNDIMGKNVVEDKL--LNEFPAVKNDL 475 Query: 474 IHPLDPHIR----------QPDDPGIKEQ 492 +H + + DDPGIK + Sbjct: 476 LHSAQTNKQGARQSSKTRLNVDDPGIKTE 504 >gi|319409418|emb|CBI83064.1| conserved exported hypothetical protein [Bartonella schoenbuchensis R1] Length = 510 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 132/502 (26%), Positives = 230/502 (45%), Gaps = 18/502 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ +F V+ + V+IT+ + S LS FL +L+ Sbjct: 1 MIRVFIYIFVVCVLGAAFGWVASHNSVVTITFMHTRLSISLLAFLSTFIVFLG---ILWG 57 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P ++ + R +G +AL GL++ + A+KM + + + E Sbjct: 58 LLYVVCFAPGAFYNYFYTRRQRRGREALSQGLLAAFIGDHLTAQKMETRALKYLEENCEP 117 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL+ Q + ++ A E M Q +T+ +Y L+ E+ +AQ YA +A Sbjct: 118 LIKLLQAQTLVLQKDSIRAIHLYEEMRQKKSTKLAGLYGLFREAMDTKTYEAAQHYAQEA 177 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233 +SP W +AV+ + +W A+ + +K E N A+LL ++ Sbjct: 178 FTLSPSLVWAHQAVLDRLSAEGQWDEALDVFEKVQKALPRSARLTAERNHTHALLLSGKA 237 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L K + + +++ KL + ++ A L N+ RKA+ I+ + WK +PHP Sbjct: 238 LHVF-KIHPVKARSAILKAHKLVPDFGPITVITAGILYKLNETRKADKIIIEAWKKDPHP 296 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +Y E VG+LK+A +L NK + ES +++K AL+ G + A +A A+ Sbjct: 297 DFGALYLG-REERAVGRLKKAKKLASYNKNTFESAFLIAKAALDAGELTLAREQAKKALN 355 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 PR+ ++LLLA IE+ ++ + W A +A DP WI D+ L S W +SPIS Sbjct: 356 YHPRESVYLLLADIEEVQGNDQGLVHQWLSLARNAERDPTWICDN-TLFSSWSAVSPISG 414 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 L FEWK P + ++ E + L+ + + + + P + S FE T Sbjct: 415 RLGCFEWKAPPRRFP-LTLEADDIVLKKEDKQNVTEIAFKDNLLSKCPPKESDSPFEVYT 473 Query: 474 IHPLDPHIRQ----PDDPGIKE 491 + + Q DD +K Sbjct: 474 NKQDEETLNQIHLDVDDSNVKT 495 >gi|259417169|ref|ZP_05741088.1| HemY domain protein [Silicibacter sp. TrichCH4B] gi|259346075|gb|EEW57889.1| HemY domain protein [Silicibacter sp. TrichCH4B] Length = 497 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 105/495 (21%), Positives = 201/495 (40%), Gaps = 16/495 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +L+++ + +++L+ ++ V IT Y +++++ + W+ Sbjct: 5 LLKILVFVAIVALMAFGAGVLMETAGGVQITVAGIEYTLGALQSVMALVALMVLTWLFFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A RF L K +GY+AL LM++A A + + Sbjct: 65 LLSLLIATLRFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LSKAAKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L L+ Q A + A E + +L +TR V + + GD +A Sbjct: 123 RYLQDPALTDLVVAQAAEMAGDTHKASEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P V + +++ A++W+ A L K K + + R A+L Sbjct: 183 RQLAEKALALRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S + AIE+ +L + + A+ AA+S I++ K R A IL+K W+ Sbjct: 243 LSSSKALLAEEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEA 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E+ ++KR L + + E+ ++ +++ + +A Sbjct: 303 QPHPDLAHAFAEIEPNESAQERVKRFETLLRVKPDHDETRLVRAELLIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407 + AP L+A IE+ + W AL A P W+ + ++ + W P Sbjct: 363 GDLVDRAPDARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + WK P ++PEY S+ +A A+ L + + V Sbjct: 423 TCENCASFDTLTWKRP-ETPEYHSATGAAMLPLLAARAEAGTGALTIVDPDPIDVSDDVE 481 Query: 468 SFEDSTIHPLDPHIR 482 D T P ++ Sbjct: 482 IDLDDTSEPSKGDVK 496 >gi|84684559|ref|ZP_01012460.1| Uncharacterized HemY-like membrane protein [Maritimibacter alkaliphilus HTCC2654] gi|84667538|gb|EAQ14007.1| Uncharacterized HemY-like membrane protein [Rhodobacterales bacterium HTCC2654] Length = 504 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 101/488 (20%), Positives = 191/488 (39%), Gaps = 17/488 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 + ++I + +I + + + G + Y +++++ + WILL Sbjct: 5 LFKIILFVVLIGAATVGATYLLETDGGIRVDIGAQEYNLGALQAVIALIVLVVTLWILLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A RF + + KGY+AL G+M++A+ A + + Sbjct: 65 LAGLIVATIRFLNGDETAISRHFDRNRERKGYEALADGMMALASGEERTA--ITKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L L+ Q A A E + +L TR V L + GD ++A Sbjct: 123 RYLRRPELTNLITAQAAEMAGDRKKATEVYKRLLADERTRFVGVRGLMKQKLEEGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229 + A KA + P + ++ +W A L +K K+ R A+L Sbjct: 183 MKLAEKAFALKPQHAETGDVLLALQATQNDWHGARETLGKKVKHGALPKDVGKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + G+ I + AIE+ KL + I S+ AA+S + Q+ KR A +L K WKV Sbjct: 243 LQEAKGIFQDGNSIRAREAAIEANKLSPDLIPGSVLAARSYLEQDNKRYAARVLTKTWKV 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP+IA + + E +LKR L + + + E+ ++++++ + D+A Sbjct: 303 QPHPDIAEAFAEIEPNETPEQRLKRFKALTKEHPDHPENKMLLAELHIAAEQFDKAREAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 P + + L+A IE+ +I W A+ A P W+ D + + + W P Sbjct: 363 GDLPTTKPTQRVLTLMAAIERGLEAPDSEIRAWLAKAVVAPRGPQWVCDKCHTVHADWGP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYP--ADDLQSMLNNGKKNHLPSIKK 465 + W P ++ + +L + P A D + + ++H + Sbjct: 423 VCENCGAFDTLSWSEPRETDMKMPGGTRMDALLVGAPDIAPDREMVAEARAEDHEALVGG 482 Query: 466 VSSFEDST 473 +++ Sbjct: 483 SDPADEAV 490 >gi|163732926|ref|ZP_02140370.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149] gi|161393461|gb|EDQ17786.1| hypothetical protein RLO149_09710 [Roseobacter litoralis Och 149] Length = 495 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 107/489 (21%), Positives = 191/489 (39%), Gaps = 28/489 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 ++++I + ++ + + + V + + SP +++ W+ L Sbjct: 5 LIKIILFVVAVAALALGAVYLLESEGGVQVQVMGTEFTFSPIQSVIAAAVLVFAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A RF + + KG++AL GLM++A+ +A M V + Sbjct: 65 LLSLLVACLRFLSGDETAISRYFDRSRERKGFQALSEGLMALASGEGRVA--MTKAVKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L LL Q A A E + ++ ATR V + + GD ++A Sbjct: 123 RYLNKPELTNLLVAQAAEMAGDRRKAEETYKKLVTTDATRFVGVRGIMKQKLADGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA I P V + +++ ++WS A L+ K K R A+L Sbjct: 183 LQLAEKAFAIKPKHEEVQDVLLRLQAQKEDWSGARKTLSAKLKYGNLPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + I AIE+ KL + I A++ AA + QN+ R A +L+K W+V Sbjct: 243 LSEAKDILSDQSSIDVQEKAIEANKLSPDLIPAAVMAAGGYVEQNRPRLAVRLLKKAWEV 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +PHP++A + + E ++KR + + I E+ E+ ++++++ + +A Sbjct: 303 HPHPDLAAAFAAIEPNETPAERIKRFMAITRIKPENPETKMLLAELHIANEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + L+A IE+ + W AL P WI D+ ++ W P Sbjct: 363 GDLAETDATARSVTLMAAIERGEGAPDTVVRGWLAKALTVSRGPQWICDNCQHIHQEWGP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 ++ WK P S EMA P L G P K Sbjct: 423 FCENCESFDTLAWKAPPLS-------------EMAMPGGVQMLPLIVGALEEKPEEKTGD 469 Query: 468 SFEDSTIHP 476 ED+ I P Sbjct: 470 IIEDAEIIP 478 >gi|149204332|ref|ZP_01881299.1| HemY domain protein [Roseovarius sp. TM1035] gi|149142217|gb|EDM30264.1| HemY domain protein [Roseovarius sp. TM1035] Length = 490 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 96/485 (19%), Positives = 182/485 (37%), Gaps = 15/485 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWIL--- 57 +++ + +++ V + V I +P ++++ W+L Sbjct: 6 IKIAVFIALVAGVTLGASFLLELDGGVRIVMAGVEINLTPIKAVIALGVLVFIIWLLMKL 65 Query: 58 ---LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114 L A +F L + DKGY+AL G++++A+ +A M + Sbjct: 66 TGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALASGEGEVA--MAQVAKAEK 123 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L L+ Q A A E + +L TR V + + GD +A Sbjct: 124 YLRKPALTNLITAQAAEMAGNRRKAEEVYKQLLTNEKTRFVGVRGILRQKLAEGDTETAL 183 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230 + A A + P V + ++ +W A LN K K R A+L + Sbjct: 184 KLAKTAFALKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKYGSLPRDVHKRRDAVLAL 243 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + + D+G I + AIE+ +L + I A++ AA+ I Q R A ++ K W V Sbjct: 244 SEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQGNTRNALRVINKAWLVR 303 Query: 291 PHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP++A + + E+ +LKR +L +++ E+ E+ ++ +++ L A Sbjct: 304 PHPDLAAAFAAIEPNESPRQRLKRFAKLLKVHPENRETRLLEAELNLAAEDFPAARRALG 363 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPL 408 ++ P ++A IE+ + + W AL A P W+ D ++ + W P Sbjct: 364 TLAEVEPDARALTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCDKCQHIHAEWAPA 423 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 + W+ P SP + L + + + + Sbjct: 424 CENCNSFDTLSWRAPPNSPIATPTGLEMLPLIVGALDEPNSEPVKTEDDTVPDAEIVEEE 483 Query: 469 FEDST 473 D Sbjct: 484 HMDRA 488 >gi|254459948|ref|ZP_05073364.1| HemY domain protein [Rhodobacterales bacterium HTCC2083] gi|206676537|gb|EDZ41024.1| HemY domain protein [Rhodobacteraceae bacterium HTCC2083] Length = 494 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 105/490 (21%), Positives = 188/490 (38%), Gaps = 15/490 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF------- 53 +L+++ + +I+ + + + G + SP I+ L L Sbjct: 5 LLKVLVFVAIIAGLTLGAGYLMEMGGGAVVNMGGTEFSLSPLQIILGLVLLLVALWVFLK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL AV F L K KGY+AL G+M++A+ + M + Sbjct: 65 LLSLLVAVLNFINGDETALSRYFSKNRERKGYQALSEGMMALASGDGSA--AMSKAAKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E + +++ ATR V + + GD ++A Sbjct: 123 KYLAKPELTNLLTAQAAEMAGDRRKAEETYKKLVKDEATRFVGVRGIMKQKLAEGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A A + P + +++ ++W+ A L K K+ R A+L Sbjct: 183 LELAEHAFALKPKHEETQDILLKLQAQGQDWAGARKTLAAKLKSGSLPRDVHKRREAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +++S D+G + A E+ +L + I A++ AA+S I Q+KKR A +L+K W V Sbjct: 243 LSQSKGVFDEGKDTEAREAATEANRLAPDLIPAAVMAARSYIEQDKKRYAVRVLKKAWDV 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHPE+A Y + E T ++KR L + + + E+ ++ +++ + A Sbjct: 303 QPHPELAAAYAAIEPEETPVERIKRFANLTKSHADHAETKMLNAELNIAAEDFPAARRAM 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407 + AP ++A IE+ + + W AL A P W+ D ++ + W P Sbjct: 363 GDLVDTAPDARSLTIMAAIERGEGASDAVVKGWLARALSAPRGPQWVCDACNHIHAEWEP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + WK P S + L + D + + + P + Sbjct: 423 VCGNCASFDTLSWKSPPVSEAVAPTGVAMLPLIVGALEDHSRVDVVDLDDIVEPEEVVDA 482 Query: 468 SFEDSTIHPL 477 I Sbjct: 483 EVVSEDIEDA 492 >gi|260429364|ref|ZP_05783341.1| HemY domain protein [Citreicella sp. SE45] gi|260419987|gb|EEX13240.1| HemY domain protein [Citreicella sp. SE45] Length = 514 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 98/499 (19%), Positives = 191/499 (38%), Gaps = 16/499 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWI---- 56 +L++I + V++ + V + IT G + P + + + A Sbjct: 5 LLKIILFVAVVAALTLGAGYVMESHGGIQITAGGYEFNLGPLQSVIAVIVLVIALYVVFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A+ +F L + KGY AL G++++++ LA M Sbjct: 65 LVSLLIALLKFINGDDTALSRYFDRNRERKGYHALAEGMLALSSGEGKLA--MAKAQKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 H L LL Q A A E + ++ TR + + GD ++A Sbjct: 123 RYLHRPALTNLLTAQAAEMTGDTRKAEEVYKKLIANDETRFVGIRGMMKLKLAKGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A +A + P + + ++Q +W A L+ K K+ + R A+L Sbjct: 183 LKLAERAFALKPKHAEIQDTLLQLQAQKHDWRGARQTLSAKLKHGALPRDVYRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + + I + AI S K + I + AA+S I++ + +KA +L+K W V Sbjct: 243 LSEAKDIFAEDKPIEAREAAIASAKGSPDLIPGACMAARSYIAKGEPKKAVRVLKKTWSV 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + ++ + T ++KR L + E+ ++ +++AL +A Sbjct: 303 EPHPDLAAAFAEIVPDETPAERMKRFRALTSLRVNHRETRLLKAELALAAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407 ++ P + ++A I + ++ W AL A P W+ D ++ + W+P Sbjct: 363 GDLVETEPDARVLTIMAAIARGEGAGEAEVRGWLAKALVAPRGPQWVCDSCNHIHAEWVP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + WK P +S + + L + D P I + Sbjct: 423 ICENCGGFDTLSWKTPPQS-DAVPPGAEMLPLIVGAIDDKADEKSAAEAAAEAPEILTPN 481 Query: 468 SFEDSTIHPLDPHIRQPDD 486 D+ + +D Sbjct: 482 PPSDTGAAAATAPATEVED 500 >gi|254451402|ref|ZP_05064839.1| HemY domain protein [Octadecabacter antarcticus 238] gi|198265808|gb|EDY90078.1| HemY domain protein [Octadecabacter antarcticus 238] Length = 490 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 97/499 (19%), Positives = 192/499 (38%), Gaps = 28/499 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF- 59 +++++ + + I++ +I G + S ++ L + + L+F Sbjct: 5 LVKILVFVAAVMAATFGAIMLLEMEGSATIDIGGQAASFSVIEMVIGLIVLVASIWLVFK 64 Query: 60 ------AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A +F + + KGY+AL G+M++A+ LA M + Sbjct: 65 LIGLAIATFKFLNGDETAISRYFSRNRERKGYEALSEGMMALASGEGRLA--MAKANRAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A +L+ TR V + + + GD ++A Sbjct: 123 KFLERPELTNLLTAQAAELAGDRKTAELTYRKLLEDDKTRFVGVRGIMKQKLQDGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILL 229 A KA I P + +++ +W A L K K + R A+L Sbjct: 183 LLLAQKAFAIKPKHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQLPRNVHRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + +G + + AIE+ ++ + + A++ AA++ +++N R A +++K W V Sbjct: 243 LSEAKDVFAEGATLEAQEAAIEANRMSPDLVPAAVMAAQAHVAKNSSRAATRVIKKAWDV 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E+ ++KR L +++ E+ ++++++ + +A Sbjct: 303 APHPDLASAFAAIAPDEDPAARVKRFSTLTKVHPNHPETRMLLAELNIAAEDFPEARRAI 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P ++A IE+ + W AL A P WI D+ ++ VW P Sbjct: 363 TELVAKDPTARSLTIMAAIERGEGSADAVVRGWLAKALTATRGPQWICDNCQHIHPVWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + W+ P K E+A PA L G+ V Sbjct: 423 ICVNCSGFDTLAWREPPKG-------------EVAMPAGVEMLPLIVGQVESPSDTLDVE 469 Query: 468 SFEDSTIHPLDPHIRQPDD 486 E + + DD Sbjct: 470 IVEAEIVEDDGAIVSSTDD 488 >gi|86136714|ref|ZP_01055292.1| HemY domain protein [Roseobacter sp. MED193] gi|85826038|gb|EAQ46235.1| HemY domain protein [Roseobacter sp. MED193] Length = 503 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 110/498 (22%), Positives = 212/498 (42%), Gaps = 24/498 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-------VILSILYFFLF 53 +L+++ + +++L+ I+ V IT Y V++ ++ FL Sbjct: 5 LLKILVFVALVALIAFGAGILMETAGGVQITVAGTEYTLGALQSVLALGVLVLSVWIFLK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F + K KGY+AL G+M++A+ LA + Sbjct: 65 LLTLLVATLKFLNGDETAMSRYFDKGRERKGYQALSDGMMALASGEGRLA--LTKASKAA 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 N L LL Q A + A E + +L TR V + + GD ++A Sbjct: 123 RYLDNPQLTDLLTAQAAEMAGDTHKAAEAYKRLLSDQTTRFVGVRGIMKQKLSEGDKDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KAL + P V + ++Q A++W+ A L+ K K+ + R A+L Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAQAEDWAGARKTLSAKLKSGSLPRDVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S E AD+ + AIE+ +L + + A+ AA++ + Q KKR A +L+K W+ Sbjct: 243 LSASREVADEAASLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRNAIKVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+++ + E T ++KR +L + + E+ ++++++ + +A Sbjct: 303 QPHPDLAHVFAEVEPEETAPQRVKRFDQLARLKPQDDETRLVMAELHIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 ++ AP + L+A IE+ + W AL A P W+ + ++ + W P Sbjct: 363 GDLVERAPDARVLTLMAAIEKGEGADNAVTQAWLARALTAPRGPQWLCTNCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + W+ P ++PE S+ ++ + S + + ++ Sbjct: 423 VCEHCTSFDTLSWQRP-ETPEVASATGVHMLPLITGATAAADSASDAVVVQDIVDVED-- 479 Query: 468 SFEDSTIHPLDPHIRQPD 485 I P+ P + D Sbjct: 480 ------IEPVSPEGQASD 491 >gi|56698662|ref|YP_169039.1| HemY domain-containing protein [Ruegeria pomeroyi DSS-3] gi|56680399|gb|AAV97065.1| HemY domain protein [Ruegeria pomeroyi DSS-3] Length = 493 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 101/495 (20%), Positives = 195/495 (39%), Gaps = 15/495 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-------VILSILYFFLF 53 ML+++ + +I+L+ + V IT Y P +++ ++ F Sbjct: 1 MLKILVFVAIIALLALGAGFLMEASGGVQITVAGTEYTLGPLQSVIGFGLLVVAVWLFFK 60 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F L + +GY+AL GLM++A+ LA M + Sbjct: 61 LLTLLIATLKFLNGDETALSRYFDRGRERRGYQALTEGLMALASGEGRLA--MAKAARAE 118 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E ++ +TR V + + GD +A Sbjct: 119 KLLQKPELTNLLVAQAAEMTGDTKKAAETYRKLVTDQSTRFVGVRGIMKQKLAEGDDETA 178 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P + ++ A++W+ A L K K + R A+L Sbjct: 179 RKLAEKALALKPRHEETQDVLLTLQTRAQDWAGARATLTSKLKTGTLPRDVYKRRDAVLA 238 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + + + AIE+ +L + I A+ AA++ I++ K + A IL K W+V Sbjct: 239 LSEARDLLSETASLDQQERAIEANRLSPDLIPAAAMAARAHIAKGKPKNAAKILTKAWQV 298 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + + T ++KR L + + + E+ ++++++ + +A Sbjct: 299 QPHPDLAHAFAEIAPDETPAARIKRFAALAKAHPQHAETRLMMAELNIVAEDFPEARRAL 358 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + AP + L+A IE+ + + W AL A P W+ D+ ++ + W P Sbjct: 359 GDLLDHAPDARAYTLMAAIERGEGASDAVVQGWLARALTAPRGPQWVCDNCQHIHAAWAP 418 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + W+ P + + L + + + S V Sbjct: 419 VCGNCNSFDTLSWRAPQDTDAGAMTTANMLPLIVGAIEQKAPDVEEVDFETDADSDDSVE 478 Query: 468 SFEDSTIHPLDPHIR 482 +P R Sbjct: 479 GTAKEVDGANEPVSR 493 >gi|260431926|ref|ZP_05785897.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415754|gb|EEX09013.1| HemY domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 506 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 102/502 (20%), Positives = 212/502 (42%), Gaps = 17/502 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL-- 58 +L+++ + ++ L+ + V IT SP + L +FA L Sbjct: 5 LLKILVFVVIVGLLAMGAGYLMESSGGVQITALGLEITLSPLQSVIALGVLVFAVWLGLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A +F L + +GY+AL GLM++A+ +A + + Sbjct: 65 LLGLLIATLKFINGDETALSRYFDRSREQRGYQALADGLMALASGEGRIA--LTKARKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L LL Q A A E + ++ PATR V + + GD ++A Sbjct: 123 KLLNKPELTNLLVAQAAEMTGDTKKAAETYKKLVSDPATRFVGVRGILKQKLAEGDEDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P + +++ A++W+ A + L K K + R A+L Sbjct: 183 RKLAEKALQLKPRHEETQDVLLKLQTKAQDWAGARSTLTAKLKAGYLPRDVYRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + D+ + AIE+ +L + + A+ AA++ I++ K R A IL+K W+ Sbjct: 243 LSEAKDILDESATVEQQERAIEANRLSPDLVPAAAMAARAYIAKGKPRAATKILKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + ++ + T ++KR L I+ + E+ +I +++ + +A Sbjct: 303 QPHPDLAHAFAEIVPDETPEERIKRFATLTRIHPDHPETRLIRAELNIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 ++ + L+A IE+ + + W AL+A P W+ ++ + + + W P Sbjct: 363 GDLVEKGADARAYTLMAAIERGEGASDAVVQGWLAKALNAPRGPQWVCENCHDIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + W+ P K+PE ++ ++ + +D + + + + + Sbjct: 423 VCSTCHSFDTLSWQRP-KTPEIATATGVHMLPLIVGALEDQSDEVEEAEIEDAEAPEVIE 481 Query: 468 SFEDSTIHPLDPHIRQ-PDDPG 488 + P + + P+D G Sbjct: 482 PEPEGAAAPDEAGAKPVPEDTG 503 >gi|90421076|ref|ZP_01228979.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90334711|gb|EAS48488.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 541 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 132/431 (30%), Positives = 220/431 (51%), Gaps = 8/431 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + V+ F ++ P V+ W + TS V L L +FA +L+ Sbjct: 1 MLRILAFLLVVLAAGIGFAWLADNPGSVTFVWQGQQVGTSLMVFLIGLGVLIFAVLLVVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R F P + + D+GYKAL +G+++ A + LAR+M + E Sbjct: 61 LVRAFFKTPGAIGNWWSTSRRDRGYKALSSGIIAAGAGDAVLARRMTKRSDKLLGTRREP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ L+ Q A+ E + A E M + P TR A+ L+ E+ R+GD ++A+ YA +A Sbjct: 121 LIRFLDAQTAMIEGDHARARSAFEQMERDPETRLLALRGLFLEAERVGDESAARHYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 + I+P PW AV++ LA +W A+ L+ + + E R RA+LL A+++ Sbjct: 181 VRIAPHVPWAGGAVLESKCLAGDWDGALAILDAQKNTRLVDRDESKRMRAVLLTAKAMTL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +++ D + +E+ KL + A++ AA++L R+ +LE W PHP+IA Sbjct: 241 SER-DPAGAKTAGLEAQKLAPDLPPAALVAAEALFRLGDLRRGSKVLETSWISQPHPDIA 299 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y H ++ +LKRA +L ++ E+ + +++ AL+ G D A AM A Sbjct: 300 EAYVHARPGDSPEDRLKRARKLHGLHSG-AEAEMSLARAALDAGEFDLARKSAMAAADAE 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + ++ W A+ A DP W + DG +S W P+SP++ L Sbjct: 359 PRESTYLLLADIEEAQTGEVGRVREWLGRAIRAPRDPAWTA-DGVVSRNWAPISPVTGRL 417 Query: 416 CYFEWKIPTKS 426 FEWK+P + Sbjct: 418 DAFEWKVPVER 428 >gi|146278943|ref|YP_001169102.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17025] gi|145557184|gb|ABP71797.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17025] Length = 482 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 99/480 (20%), Positives = 191/480 (39%), Gaps = 17/480 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 +++++ + ++ + ++ + + GN P +++ L W+ L Sbjct: 5 LIKILIFVALVVGLTFGASMLMESGGALRLAVGNLELNLGPLQAVIAALLLIFTVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 FAV RF + + KG +AL G+M++AA +A M + Sbjct: 65 IMGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRMA--MSRASKAR 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + LL Q A A E +++LQ T+ + L + GD +A Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLQDERTKFVGIRGLLKQKLDEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A KA +I+P + +++ +WS A + L K K+ + R A+L Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADRHDWSGARSTLTAKMKSGALPKAVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K W+ Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + E V +LKR L IN + ES ++ ++++L A Sbjct: 303 EPHPDLAAAFAEIEPNETPVERLKRFRTLTSINPDHEESRLLTAELSLAAEDFPAARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P + ++A +E+ + + W AL A P W D+ + + W P Sbjct: 363 GDIVSRHPTQRSLTIMAAVERGEGGDEAVVRGWLARALSAPRGPQWCCDNCQTVHANWAP 422 Query: 408 LSPISKTLCYFEWKIPTK--SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 + W+ PT+ +P +E + + A + + + K Sbjct: 423 ICDNCGGFDTLSWREPTRKSTPSATGTELLPLIVGAPAAAQAAAVDDDVIDEKAVEPASK 482 >gi|126734495|ref|ZP_01750242.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2] gi|126717361|gb|EBA14225.1| hypothetical protein RCCS2_10049 [Roseobacter sp. CCS2] Length = 457 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 89/450 (19%), Positives = 167/450 (37%), Gaps = 15/450 (3%) Query: 22 SHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-------WILLFAVSRFFLSCPAMLFH 74 ++ + + S ++ L + A L A +F + Sbjct: 1 MEVDGGATVDVAGQEFTLSTLEMVFALGALVVAVWLGLKLLALCVATFKFLNGDETAISR 60 Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 + KGY+AL G+M++A+ LA M L LL Q A Sbjct: 61 YFDRNRERKGYEALSEGMMALASGEGHLA--MTKAARADKYLQQPQLTNLLTAQAAEMTG 118 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A E + +L TR V + + GD ++A A KA + P + + Sbjct: 119 DRKTAEETYKKLLSDDKTRFVGVRGIMKQKLSDGDTDTAMALAQKAFALKPKHEETQDVL 178 Query: 195 VQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ +W+ A L K K+ R A+L ++ + + D+G I + AI Sbjct: 179 LRLQAEKSDWAGARKTLGAKLKSGSLPRDVHKRRDAVLALSEARDILDEGKTIEAREAAI 238 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG- 309 E+ +L + I A+I AA+ I + R A +L K+W PHP+IA + + + + Sbjct: 239 EANRLSPDLIPAAIMAARGYIGEGNARYATRVLTKVWNAQPHPDIAAAFAEIAPDESSDE 298 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 +LKR +L + + E+ ++++++ + A ++ P ++A IE+ Sbjct: 299 RLKRFTKLTKTTADHPETKMLMAELHIAAEDFPAAKRALGELVEKDPTARNLTIMAAIER 358 Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYFEWKIPTKSPE 428 + + W AL A P WI + ++ W + WK P S Sbjct: 359 GEGADDSVVRGWLTKALTAPRGPQWICGNCQHIHPTWAATCDNCGSFDTLAWKTPPASDV 418 Query: 429 YISSENINFSLEMAYPADDLQSMLNNGKKN 458 + + L + + ++ Sbjct: 419 AMPAGTEMLPLIVGQTKEAQLPSTEVVEEA 448 >gi|222087479|ref|YP_002546016.1| hypothetical protein Arad_4359 [Agrobacterium radiobacter K84] gi|221724927|gb|ACM28083.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 532 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 173/519 (33%), Positives = 264/519 (50%), Gaps = 31/519 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + ++ + F ++ P D+S+ W +LY+T V IL + A ++++ Sbjct: 1 MIRLLIFALLVLALGYGFSWLADRPGDLSLVWEGQLYQTKLIVAAGILIALVAATMIVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 61 FIRLIWNSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARTRGLIRADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A +K E+M P TRE + LY E+ R+G +A++YA KA Sbjct: 121 LINLLEAQAALIEGKHDEARQKFELMANDPETRELGLRGLYLEAKRLGANEAARQYAEKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L+Q+K + + NR RA+LL AR+ + Sbjct: 181 ADHAPYLPWAAQATLEYRSQAGNWDDAIKLLDQQKVAHVVDKETANRQRAVLLTARANDK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D + DA+ +LKL + + A++ AAK+L ++K RKA +LE++WK PHPEI Sbjct: 241 LE-SDPAGARDDALAALKLSADFVPAALTAAKALFREDKVRKAASMLEQVWKAKPHPEIG 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y S ++V +LKRA RLE I +VE+L++ +K AL+ +A AKA A +I Sbjct: 300 KAYVRARSGDSVTDRLKRAERLEAIRPNNVEALLVTAKAALDAHDFAKARAKAEAAARID 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ FLLLA IE+A +++ ++ +W AL A DP W++ DG++S WLPLSPI+ L Sbjct: 360 AREGAFLLLADIEEAETNDQGRVRHWMAQALRAPRDPAWVA-DGFVSDKWLPLSPITGRL 418 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST-- 473 FEWK P E E S++ A + + V+S T Sbjct: 419 DAFEWKAPFGQIEGPLEEGTAVSVDAALKSLPPMREATPATAAAKATSPIVASPTTRTSV 478 Query: 474 ----------------------IHPLDPHIRQPDDPGIK 490 P PDDPG+K Sbjct: 479 IELEPIAAKPATAAAATEPAKEPEPRPFFGGAPDDPGVK 517 >gi|319404858|emb|CBI78459.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 514 Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 132/480 (27%), Positives = 214/480 (44%), Gaps = 10/480 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ F ++ + IT+ + S I+S + L + L+ Sbjct: 1 MIRIFIYIFVVCVIGAVFSWGANNNSFLVITFLQMRFTVSLLTIISGIVILLMVLVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ R + G KAL GL++ A + A+KM + E Sbjct: 61 FFRIIFSIPRTLYSFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYFIKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + +T+ +Y L+ E+ + AQ YA +A Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDESTKLAGLYGLFREAMNTKAYDVAQHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENA 237 LD+SP W + V+ + +W++A+ + ++ R A Sbjct: 181 LDLSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCTSERKYTHALLLSGLA 240 Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + + +++ KL + + ++ L + RKA+ I+ K W+ NPHP+ Sbjct: 241 LHLTETQLAGARKAILKAHKLMPDFVPITVLMVDILYQLKEVRKADKIIIKAWQENPHPD 300 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y E+ VG+LKRA L NKE ES IV+K AL+ G ++ A A A+ Sbjct: 301 LGALYLR-REESAVGRLKRAKTLAFYNKEIFESAFIVAKAALDAGELELAREYAQKALTY 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 PR+ ++LLLA IE+A + W AL A PDP W DG S WL +SPIS Sbjct: 360 HPRESVYLLLADIEEAKGNGQG-SRQWLSLALRAEPDPAWAC-DGSFFSSWLIVSPISGR 417 Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 L EWK+P + SP + +N+ E D + ++ N SI + T Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKGVIKNKSFEEKSSIGPDFLLKSRT 477 >gi|86359488|ref|YP_471380.1| hypothetical protein RHE_CH03907 [Rhizobium etli CFN 42] gi|86283590|gb|ABC92653.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 535 Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 165/523 (31%), Positives = 260/523 (49%), Gaps = 34/523 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + + L+ F + P D+S+ W ++Y+T V +S + + A ++++ Sbjct: 1 MIRLVVFALFVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 61 FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLLAVLLTARAAEK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + DA+++LKL + + A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 241 LE-GNPAGARDDALQALKLAVDLVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIG 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y ++T+ +LKRA RLE + +VESL++V++ AL+ +A +KA A +I Sbjct: 300 QTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARSKAEAAARIE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ + Sbjct: 360 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 418 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPA----------------------DDLQSMLN 453 FEWK P E + + + ++ Sbjct: 419 DAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESPVNDHRIIELERAATIAE 478 Query: 454 NGKKNHLPSIKKVSSFEDSTIHPLDPHIRQ-----PDDPGIKE 491 + P+ K S P + PDDPG+++ Sbjct: 479 AVRPAPAPAKPKSVESTASDKAPAPNEAKPFFGGLPDDPGVRD 521 >gi|221640998|ref|YP_002527260.1| HemY domain-containing protein [Rhodobacter sphaeroides KD131] gi|221161779|gb|ACM02759.1| HemY domain protein precursor [Rhodobacter sphaeroides KD131] Length = 478 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 97/467 (20%), Positives = 189/467 (40%), Gaps = 15/467 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 M++++ + ++ + + + + G+ P +++ L L W+ L Sbjct: 1 MIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 60 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 FAV RF + + KG +AL G+M++AA A M + Sbjct: 61 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 118 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + LL Q A A E +++L+ TR V L + GD +A Sbjct: 119 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTETA 178 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A KA +I+P + +++ +WS A + L+ K K+ + R A+L Sbjct: 179 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 238 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K W+ Sbjct: 239 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 298 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +LKR L I+ + E+ +++++++L A Sbjct: 299 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 358 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P + ++A +E+ + + W AL A P W D+ + + W P Sbjct: 359 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 418 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454 + W+ PT+ ++ L + PA ++ Sbjct: 419 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 465 >gi|319407818|emb|CBI81471.1| conserved exported hypothetical protein [Bartonella sp. 1-1C] Length = 514 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 129/480 (26%), Positives = 212/480 (44%), Gaps = 10/480 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ Y FV+ ++ F ++ + IT+ + S I+S L L + L+ Sbjct: 1 MIRIFIYIFVVCVIGAIFSWGANNNSFLVITFLQMRFTVSLLTIISGLVILLMVLVFLWK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R S P L+ R + G KAL GL++ A + A+KM + E Sbjct: 61 FFRIIFSIPRTLYRFFSGRYQECGRKALTQGLLAAFAGDYAAAQKMERRALKYLIKDYEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LL QI ++ A E M + T+ +Y L+ E+ + A+ YA +A Sbjct: 121 LIKLLRAQILSLQKNSMKAIALYEEMQKDEPTKLAGLYGLFREAMNTKAYDVAKHYAEEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENA 237 L +SP W + V+ + +W++A+ + ++ R A Sbjct: 181 LALSPALLWAQQFVLDRLSAEGQWNKALDVFYRAQRALPRSEHCNSERNYTHALLLSGLA 240 Query: 238 D---KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + + +++ KL + + ++ L + RKA+ ++ K W+ NPHP+ Sbjct: 241 LHLTETKLAEARKAILKAHKLMPDFVPITVIMIDILYQLKEVRKADKMIIKAWQENPHPD 300 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y E+ VG+LKRA L NK+ ES IV+K AL+ G ++ A A A+ Sbjct: 301 LGALYLR-REESAVGRLKRAKALASYNKDIFESAFIVAKAALDAGELELAREYAQKALTY 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 PR+ ++LLLA IE+A + W AL A PDP W DG S WL +SPIS Sbjct: 360 HPRESVYLLLADIEEAQGNGQGN-RQWLSLALRAEPDPAWAC-DGSFFSSWLIVSPISGR 417 Query: 415 LCYFEWKIPTK-SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 L EWK+P + SP + +N+ E D + ++ N SI + T Sbjct: 418 LGRCEWKVPPRCSPITLEVDNVMLKRECKKGVVDEKEVIKNKSFEEKSSIGPDFLLKSRT 477 >gi|77462046|ref|YP_351550.1| hypothetical protein RSP_1508 [Rhodobacter sphaeroides 2.4.1] gi|77386464|gb|ABA77649.1| Uncharacterized HemY-like membrane protein [Rhodobacter sphaeroides 2.4.1] Length = 482 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 96/467 (20%), Positives = 190/467 (40%), Gaps = 15/467 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 +++++ + ++ + + + + G+ P +++ L L W+ L Sbjct: 5 LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 FAV RF + + KG +AL G+M++AA A M + Sbjct: 65 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + LL Q A A E +++L+ TR V L + GD ++A Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A KA +I+P + +++ +WS A + L+ K K+ + R A+L Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K W+ Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +LKR L I+ + E+ +++++++L A Sbjct: 303 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P + ++A +E+ + + W AL A P W D+ + + W P Sbjct: 363 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454 + W+ PT+ ++ L + PA ++ Sbjct: 423 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 469 >gi|126460935|ref|YP_001042049.1| HemY domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126102599|gb|ABN75277.1| HemY domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 482 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 96/467 (20%), Positives = 189/467 (40%), Gaps = 15/467 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 +++++ + ++ + + + + G+ P +++ L L W+ L Sbjct: 5 LIKILIFVALVVALTFGASQLMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 FAV RF + + KG +AL G+M++AA A M + Sbjct: 65 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + LL Q A A E +++L+ TR V L + GD +A Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A KA +I+P + +++ +WS A + L+ K K+ + R A+L Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K W+ Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +LKR L I+ + E+ +++++++L A Sbjct: 303 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P + ++A +E+ + + W AL A P W D+ + + W P Sbjct: 363 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454 + W+ PT+ ++ L + PA ++ Sbjct: 423 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 469 >gi|85705790|ref|ZP_01036887.1| HemY domain protein [Roseovarius sp. 217] gi|85669780|gb|EAQ24644.1| HemY domain protein [Roseovarius sp. 217] Length = 490 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 96/482 (19%), Positives = 180/482 (37%), Gaps = 15/482 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL--- 58 +++ + +++ V + V I +P + L +FA LL Sbjct: 6 IKIAVFIALVAGVTLGASFLLELDGGVRIVMAGVEINLTPIKAVIALGVLVFAIWLLMKL 65 Query: 59 ----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114 A +F L + DKGY+AL G++++A+ +A M + Sbjct: 66 TGLLVASLKFINGDETALSRYFDRSRQDKGYRALSEGMLALASGEGEVA--MAQAAKAEK 123 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L L+ Q A + A E + +L TR V + + GD +A Sbjct: 124 YLRKPALTNLITAQAAEMAGNRSKAEEVYKRLLTNEKTRFVGVRGILRQKLAEGDTETAL 183 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230 + A A + P V + ++ +W A LN K K R A+L + Sbjct: 184 KLAKTAFTLKPRHAEVQDTLLDLQAKTSDWKGARETLNAKLKYGNLPRDVHKRRDAVLAL 243 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + + D+G I + AIE+ +L + I A++ AA+ I Q R A ++ K W V+ Sbjct: 244 SEARDVLDEGKTIEAREAAIEANRLSPDLIPAAVLAARGYIDQGNTRNALRVINKAWLVH 303 Query: 291 PHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP +A ++ + + T +LKR +L +++ + E+ ++ +++ L A Sbjct: 304 PHPNLAAVFAAIEPDETPNQRLKRFAKLLKVHPDHRETRLLAAELNLAAEDFPAARRALG 363 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPL 408 ++ P ++A IE+ + W AL A P W+ D ++ W P Sbjct: 364 NLAEVEPDARAVTIMAAIERGEGAPDAVVKGWLARALSAPRGPQWVCDKCQHIHVEWSPT 423 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 + W+ P S + L + + + + + Sbjct: 424 CENCNSFDTLSWRAPPNSTIATPTGLEMLPLIVGALDEPHKEAAKEMDDTVVDAEIVAEE 483 Query: 469 FE 470 E Sbjct: 484 DE 485 >gi|126738548|ref|ZP_01754253.1| HemY domain protein [Roseobacter sp. SK209-2-6] gi|126720347|gb|EBA17053.1| HemY domain protein [Roseobacter sp. SK209-2-6] Length = 503 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 114/497 (22%), Positives = 205/497 (41%), Gaps = 19/497 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +L+++ +F +I++ I++ V IT Y S +L++ L W+ Sbjct: 5 LLKVLVFFAIIAVAAFGVIVLGETAGGVQITVAGTEYTLSALQSVLALGVLVLAVWVFFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F + K KGY+AL GLM++A+ LA M Sbjct: 65 VLALLVATLKFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKASRAA 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A + + +L TR V + + GD ++A Sbjct: 123 RYLEKPELTDLLTAQAAEMAGDTGKAADAYKRLLSNQNTRFVGVRGIMKQKLSEGDSDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KAL + P V + ++Q A++W+ A L+ K K + R A+L Sbjct: 183 LQLAEKALALRPKHEEVQDTLLQLQAKAEDWAGARKTLSTKLKTGTLPRDVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S E A + AIE+ +L + + A+ AA++ + Q KKR A IL+K W Sbjct: 243 LSASKEVAADTSSLEQREQAIEANRLSPDLVPAAAMAARAYLEQGKKRAAIKILKKAWSA 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E+ ++KR +L +N ++ E+ ++++++ + +A Sbjct: 303 QPHPDLAHAFAEVEPNESASERVKRFDQLARLNPQNDETRLVMAELLIVAEDFPEARRVL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 ++ AP L+A IE+ I W AL A P W+ ++ ++ + W P Sbjct: 363 GDLVERAPDARSLTLMAAIEKGEGAGDAVIQGWLARALSAPRGPQWLCENCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + WK P ++PE S+ + + + +P + VS Sbjct: 423 VCEHCTSFDTLSWKRP-ETPELNSATAAHMLPLITGAGASTEVA---QMVEDVPEAEVVS 478 Query: 468 SFEDSTIHPLDPHIRQP 484 D P Sbjct: 479 DVSGEAEESADAPEAAP 495 >gi|332559973|ref|ZP_08414295.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N] gi|332277685|gb|EGJ23000.1| HemY domain-containing protein [Rhodobacter sphaeroides WS8N] Length = 482 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 96/467 (20%), Positives = 189/467 (40%), Gaps = 15/467 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILL- 58 +++++ + ++ + + + + G+ P +++ L L W+ L Sbjct: 5 LIKILIFVALVVALTFGASELMESGGALRLAVGDLELNLGPLQAVIAALLLILAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 FAV RF + + KG +AL G+M++AA A M + Sbjct: 65 IVGFLFAVLRFLNGDETAVSRYFDRSREQKGLRALSEGMMALAAGEPRTA--MSRAAKAR 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + LL Q A A E +++L+ TR V L + GD +A Sbjct: 123 KYLGQNAMTTLLNAQAAQQAGDSRRAQESYKLLLEDERTRFVGVRGLLKQKLDEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A KA +I+P + +++ +WS A + L+ K K+ + R A+L Sbjct: 183 LALAQKAFEINPKHSETQDILLKLQADLHDWSGARSTLSAKMKSGALPKAVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + D+ I + AI + K + I A+ AA+S ++Q K+ A +L+K W+ Sbjct: 243 LQTAKDVFDENASIEAREAAILANKQSPDLIPAAAMAARSYLAQGNKKYATRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +LKR L I+ + E+ +++++++L A Sbjct: 303 EPHPDLAAAFAEIEPDETPAERLKRFRTLTAIHPDHDETRMLIAELSLAAEDFPGARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P + ++A +E+ + + W AL A P W D+ + + W P Sbjct: 363 GDIVARHPTQRALTIMAAVERGEGGDEAVVRGWLARALTAPRGPQWCCDNCQTVHATWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454 + W+ PT+ ++ L + PA ++ Sbjct: 423 ICDNCGGFDTLSWREPTQKSTPSATGTELLPLIVGAPAARPADPMDE 469 >gi|254476677|ref|ZP_05090063.1| HemY domain protein [Ruegeria sp. R11] gi|214030920|gb|EEB71755.1| HemY domain protein [Ruegeria sp. R11] Length = 496 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 107/489 (21%), Positives = 204/489 (41%), Gaps = 21/489 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWI--- 56 +L+++ + +++++ +++ V IT Y S ++++ W+ Sbjct: 5 LLKILVFVAIVAVLAFGASLLTETAGGVQITVAGTEYTLSALQSVIALAVLVFAVWLGFK 64 Query: 57 ---LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A RF L K KGY+AL G+M++A+ LA M + Sbjct: 65 VLSLLIATLRFLNGDETALSRYWDKGRERKGYQALSDGMMALASGEGRLA--MAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 +N L LL Q A A E + ++ +TR V + + GD +A Sbjct: 123 KYLNNPELTDLLTAQAAEMAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILL 229 ++ A KAL + P V + ++ A++W+ A L K K + R A+L Sbjct: 183 RQLAEKALALRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S + G + AIE+ +L + + A+ AA++ +S+ KKR A +L+K W+ Sbjct: 243 LSASKAIVEDGATVEQQEQAIEANRLSPDLVPAAAMAARTYLSRGKKRNAIRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + E+ ++KR ++L + + E+ +I++++ + +A Sbjct: 303 QPHPDLAQAFAEVEPGESAQERVKRFVQLSRLAPQHDETRLIMAELNIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407 ++ AP L+A IE+ I W AL A P W+ D ++ + W P Sbjct: 363 GDLVERAPDARALTLMAAIEKGEGAPDAVIQGWLTRALSAPRGPQWVCDKCNHIHADWAP 422 Query: 408 LSPISKTLCYFEWKIP----TKSPEYISSENINFSLEMAYPAD--DLQSMLNNGKKNHLP 461 + + W P P+ + + A+ AD D++ + ++ Sbjct: 423 VCENCASFDTLSWTRPEAPHVMGPQVLPLLTGKPQADEAHGADIADVELLEDDQTDAEDD 482 Query: 462 SIKKVSSFE 470 S E Sbjct: 483 SATVSEDAE 491 >gi|150398166|ref|YP_001328633.1| HemY domain-containing protein [Sinorhizobium medicae WSM419] gi|150029681|gb|ABR61798.1| HemY domain protein [Sinorhizobium medicae WSM419] Length = 551 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 169/539 (31%), Positives = 272/539 (50%), Gaps = 50/539 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + ++ + F ++ P ++S+ W +L S S+L A ++ Sbjct: 1 MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLLRAASLLISVFAAVLIAVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R S P + R D+GY+AL TGL++ A + LARKM + + E Sbjct: 61 LLRTIWSSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDANLARKMTARTRSLISSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E +Y+ A +K E+M P TRE + LY E+ R+G +A+ YA +A Sbjct: 121 LIHLLEAQTSLIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARHYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + +P PW T A + A++W AI L+Q + KE +R +A+LL AR++E Sbjct: 181 AEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAANVLERKEADRKKAVLLTARAMEQ 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D ++ DA +LKL D+ + A++ AAK+L ++ RK ILEK+WK++PHPEIA Sbjct: 241 LE-ADPKSARDDARAALKLDDSLVPAALVAAKALFREDNLRKGASILEKMWKLDPHPEIA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y ++ + +LKRA RLE + + SL V++ ALE + A KA A +I Sbjct: 300 RLYVRARGGDSALDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARTKAEAAARID 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLLLA IE+A++ + +I YW AL + DP W + DG S WLP+SP++ L Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRYWMSQALRSPRDPAWTA-DGVTSPSWLPVSPVTGRL 418 Query: 416 CYFEWKIPTKS-------------------------PEYISSENINFSLEMAYPADDLQS 450 FEWK P P + +++ A PA+ +++ Sbjct: 419 DAFEWKAPPARLPAATEEGYLNPDAAIRSLPPVATVPRPATEPETESAVDAAPPAERVEA 478 Query: 451 ------------------MLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491 + +K +P++ + +DS P R PDDPG++E Sbjct: 479 EPEKAITVPDPNETVAPPAGDPNRKEPVPAVASPAKGKDSEEAPDPFFGRPPDDPGVRE 537 >gi|126724569|ref|ZP_01740412.1| HemY domain protein [Rhodobacterales bacterium HTCC2150] gi|126705733|gb|EBA04823.1| HemY domain protein [Rhodobacterales bacterium HTCC2150] Length = 488 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 91/473 (19%), Positives = 177/473 (37%), Gaps = 15/473 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF------- 53 +++++ + I + ++ + I +GN Y P + L + Sbjct: 5 LIKILFFVVAIIALAFGVNYLTSMSGGIQIAFGNTEYTLGPLQSIVALILLVLTLYLILK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + A RF + KGY+AL GLM++A+ +A + + Sbjct: 65 LIGFVLAFVRFLNGDETAISRYFSANRERKGYQALSDGLMALASGEGRVA--LSQAERAR 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L L+ Q A E A + +L+ TR V + + GD +A Sbjct: 123 RLLNKPELTNLISAQAAEMEGDTKKAKDIYVELLKDERTRFVGVRGIMKQKLAEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KA D+ P + ++Q ++W+ A LN K N R A+L Sbjct: 183 KKLAEKAFDLKPKHNETGDVLLQLQAENEDWAGARKTLNTKVSNGVLPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + + + AIE+ +L + I A++ AAK+ + Q K R A +L WK Sbjct: 243 LSEARDIFANAGAVEAQVAAIEANRLSPDLIPAAVMAAKAYMEQEKPRYATRVLIAAWKS 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + ++ E T ++KR L + + + E+ ++++++ + A Sbjct: 303 QPHPDLAAGFADIVPTETTKARIKRFAGLIKSDPDHAEARLLMAELHIADEDFAGARKAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407 ++A IE+ + + W AL A P W D ++ S W Sbjct: 363 GGLNDDYLTSRSLTIMAAIERGEGSDDAIVRGWLTKALGASRGPQWTCDKCNHVHSNWTA 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL 460 + WK P + + L + + + + Sbjct: 423 ICDRCSGFDTLAWKTPAEGELSMHGSTQMLPLIVGQAKSTEPLEDSAKEDATI 475 >gi|49476261|ref|YP_034302.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1] gi|49239069|emb|CAF28372.1| hypothetical protein BH16090 [Bartonella henselae str. Houston-1] Length = 517 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 139/509 (27%), Positives = 241/509 (47%), Gaps = 22/509 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ Y FV+ L +F V++Y + + IT+ + + S LS+L FL LL+ Sbjct: 1 MIRILIYTFVVCLFGLAFEWVANYNDVLVITFSHFRFSVSLLTALSLLILFLGILALLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + S P +L + +KR GY+AL G +++ A + +A+KM + V + + E Sbjct: 61 LFSILFSVPHILSNYFYKRRQKHGYEALSQGFLAVFAGDAIVAQKMQTRVEKYLAGNREP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q + A E M + T+ +Y L+ E+ + +AQ+YA +A Sbjct: 121 LAKLLQAQTLSLQNNSARAIGLYEQMRKEKQTKLAGLYGLFREAMKTNAYEAAQQYAQEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARS 233 +SP W +AV+ + W +A+ Q +K A E +A+LL ++ Sbjct: 181 QALSPALLWAHQAVLDRLSAEGSWDKALDVFEQAQKALPRSVRLAPERQHLQALLLSGQA 240 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + + + +++ KL + I ++ AA L N+ RKA+ ++ W+ PHP Sbjct: 241 LHLL-RTHPVDACKAILKAHKLVPDFIPITVIAADILYKLNETRKADKMIVAAWQKEPHP 299 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ +Y E VG+LK+A L NK++ ES +++K AL+ G A +A A++ Sbjct: 300 DLGALYLE-REEGAVGRLKKAKTLASYNKDTFESTFLIAKAALDAGERVLAREQAQKALQ 358 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 R+ ++LLLA IE+A +N + W AL A DP+W+ DG + S W +SPIS Sbjct: 359 YHKRESVYLLLADIEEAQGNNQAAVRQWLSLALRAERDPVWMC-DGTIFSSWAVISPISG 417 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 L FEWK P + P + + +D + ++ ++K S + Sbjct: 418 RLGCFEWKAPPRMPPLTL--EADTLVLTKKDQEDKEDKVDKNAVVEGEMLEKSPSVKVDL 475 Query: 474 IHPLDPHIR----------QPDDPGIKEQ 492 +H + DDPG+K + Sbjct: 476 LHHAQIDKQDTEESSQIRLNVDDPGVKIE 504 >gi|89067497|ref|ZP_01155010.1| HemY domain protein [Oceanicola granulosus HTCC2516] gi|89047066|gb|EAR53120.1| HemY domain protein [Oceanicola granulosus HTCC2516] Length = 495 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 99/479 (20%), Positives = 199/479 (41%), Gaps = 15/479 (3%) Query: 7 YFFVISLVICSFIIVSHYPEDVSITWGNRLYR-TSPFVILSILYFFLFAWI------LLF 59 + V+ + + + + ++T T+ + ++ + L W+ LL Sbjct: 11 FVVVVMAIAYGAVWLMNVEGGATVTMAGYEVTLTTLQLAIAFVVLVLAIWLFFKLLGLLS 70 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 A+ F + +KR +G++AL G+M++AA + LA + Sbjct: 71 ALFHFLNGDETAVSRYFNKRTERRGFEALSEGMMALAAGDGQLA--LVKAEKADRYLDRP 128 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL+ Q A +A + +++LQ TR V L + G+ +A + A + Sbjct: 129 ELTNLLKAQAAERAGDRRVAEDTYKLLLQDDRTRFVGVQGLMRQKLEAGETETAMQLAQR 188 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLE 235 A +SP V+ +++ ++W+ A L + K R A+L ++ + E Sbjct: 189 AFALSPKNDEVSNTLLRLQAEHEDWAGARQTLGARLKTGAIPRDVHRRRDAVLALSEARE 248 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 +G A++ +AIE+ +L + I A+I AA+ I QN R A +L+K W+ PHP++ Sbjct: 249 KLLEGKDAAAHEEAIEANRLSPDLIPAAIMAARGYIDQNNGRSAARVLKKAWEAQPHPDL 308 Query: 296 ANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A + + + ++KR L ++ + E+ ++++++ + +A ++ Sbjct: 309 AAAFADIKPDEGPAERIKRFRDLTRVHPDHSETRMLLAELHVAAEDFPEAKRALGDLVET 368 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLPLSPISK 413 P + L+A IE+ + + W AL A WI D+ + +++ W P+ P K Sbjct: 369 DPTARVLTLMAAIERGAGADDTVVRGWLTKALTAPRGDQWICDNCHNVAAHWAPVCPNCK 428 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 + WK P +S + L + D G + +S + Sbjct: 429 SFDTLAWKRPPQSEVAMPRGVEMLPLIVGRIEDRSAETAAPGSVPPEEAKVVDASADGD 487 >gi|99082666|ref|YP_614820.1| HemY-like [Ruegeria sp. TM1040] gi|99038946|gb|ABF65558.1| HemY-like protein [Ruegeria sp. TM1040] Length = 494 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 104/491 (21%), Positives = 194/491 (39%), Gaps = 16/491 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSI-------LYFFLF 53 +L+++ + +++L+ ++ V IT Y + + F Sbjct: 5 LLKILVFVAIVALLAFGAGVLMETAGGVQITVAGTEYTLGALQSVMALLALMLLTWLFFK 64 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A RF L K +GY+AL LM++A A + + Sbjct: 65 LLSLLLATLRFLNGDETALSRYFDKGRERRGYQALSDSLMALAVGEGRTA--LTKAAKAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L L+ Q A + A E + +L +TR V + + GD +A Sbjct: 123 RYLQDPALTDLVVAQAAEMAGDTHKAAEAYKRLLSDQSTRFVGVRGIMKQKLSEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P V + +++ A++W+ A L K K + + R A+L Sbjct: 183 RQLAEKALALRPKHEEVQDTLLKLQAQAEDWAGARQTLATKLKTGTLPREVFKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S + AIE+ +L + + A+ AA+S I++ K R A IL+K W+ Sbjct: 243 LSSSKALLAEEATPEQQEQAIEANRLSPDLVPAAALAARSYIAKGKPRNAVRILKKAWEA 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E ++KR L + + E+ ++ +++ + +A Sbjct: 303 QPHPDLAHAFAEIEPNETAEARVKRFEPLLRLKPDHDETRLVRAELLIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407 + AP L+A IE+ + W AL A P W+ + ++ + W P Sbjct: 363 GDLVDRAPDARALTLMAAIEKGEGGPDAMVQGWLTKALTAPRGPQWVCESCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + WK P ++PEY S+ +A DD + +++ Sbjct: 423 TCENCASFDTLTWKRP-ETPEYHSATGAAMLPLLAGRQDDNGTGALTIIDPEPSDVREDG 481 Query: 468 SFEDSTIHPLD 478 T +P D Sbjct: 482 DQTQRTDNPDD 492 >gi|116254227|ref|YP_770065.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115258875|emb|CAK09983.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 542 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 155/463 (33%), Positives = 239/463 (51%), Gaps = 7/463 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++RL+ + + L+ F ++ P D+S+ W ++Y+T V S + + A ++ + Sbjct: 2 LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALVAAVMIAWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 62 FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + DA+++LKL + I A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 242 LE-SNPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y ++T+ +LKRA RLE +VESL++V++ AL+ +A AKA A + Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAAHMQ 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ L Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458 FEWK P E + + + Sbjct: 420 DAFEWKAPFGQIEGALEDGSAPASIETALKTLPPLRDVRPESP 462 >gi|254465019|ref|ZP_05078430.1| HemY domain protein [Rhodobacterales bacterium Y4I] gi|206685927|gb|EDZ46409.1| HemY domain protein [Rhodobacterales bacterium Y4I] Length = 498 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 104/498 (20%), Positives = 205/498 (41%), Gaps = 17/498 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL-- 58 +L+++ + +++L+ ++ V IT Y S + L + A L Sbjct: 5 LLKILVFVAIVALLAFGAGLLMETAGGVQITVAGTEYTLSALQSVIALGVLVVAVWLFLK 64 Query: 59 -----FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A RF L K KGY+AL GLM++A+ L + + Sbjct: 65 LLSLLVATLRFLNGDETALSRYWDKGRERKGYRALSEGLMALASGEGRL--ALAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 N L LL Q A + A + + +L TR V + + GD ++A Sbjct: 123 KYLQNPELTDLLVAQAAEMSGDTHKAADAYKRLLSNQQTRFVGVRGIMKQKLSQGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 ++ A KAL + P V + +++ A++W+ A L+ K K + R A+L Sbjct: 183 RQLAEKALALRPKHEEVQDTLLRLQAQAEDWAGARKTLSTKLKTGTLPRDVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S D+ I AIE+ +L + + A+ AA++ +++ KKR A +L+K W+ Sbjct: 243 LSASKGVIDENATIEQREQAIEANRLSPDLVPAAAMAARAYLAKGKKRPAVRLLKKTWQS 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E+ ++ R +L +N + E+ ++++++ + +A Sbjct: 303 QPHPDLAHAFAEVEPDESAAERVARFDQLARLNPQDDETRLVMAELNIVAEDFPEARRWL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + AP L+A IE+ + + W AL + P W+ + ++ W P Sbjct: 363 SDLTERAPDARALTLMAAIERGEGADDKVVQGWLTRALTSPRGPQWVCSNCNHIHVEWEP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + WK P ++PE ++S + L + D + + V Sbjct: 423 VCEHCTSFDTLSWKRP-ETPE-VASHAAAYMLPLITGVLDSKQSDTVDDAEEADLAEPVP 480 Query: 468 SFEDSTIHPLDPHIRQPD 485 + +++P+ Sbjct: 481 DADGDVEPEQQDAVKEPN 498 >gi|241206707|ref|YP_002977803.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860597|gb|ACS58264.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 544 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 156/463 (33%), Positives = 240/463 (51%), Gaps = 7/463 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++RL+ + + L+ F ++ P D+S+ W R+Y+T V S + + A ++ + Sbjct: 2 LIRLVVFALFVLLLAYGFSWLADRPGDLSLIWEGRIYQTKLIVAASAIIALVAAVMIAWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 62 FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 122 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAGEK 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + DA+++LKL + I A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 242 LE-SNPTGARDDALQALKLAADFIPAALIAAKALFREGGVRKAASILEQAWKSAPHPEIG 300 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y ++T+ +LKRA RLE +VESL++V++ AL+ +A AKA A ++ Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGQRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ L Sbjct: 361 PREAAYLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458 FEWK P E + + + Sbjct: 420 DAFEWKAPFGQIEGALEDGSAPASIETALKTLPPLRDVRPESP 462 >gi|163738035|ref|ZP_02145451.1| HemY-like protein [Phaeobacter gallaeciensis BS107] gi|161388651|gb|EDQ13004.1| HemY-like protein [Phaeobacter gallaeciensis BS107] Length = 507 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 101/494 (20%), Positives = 201/494 (40%), Gaps = 15/494 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +L+++ + +++++ +++ V IT Y S + L +F +LF Sbjct: 5 LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVVWVLFK 64 Query: 61 VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + RF + K KGY+AL GLM++A+ LA M + Sbjct: 65 LLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E + ++ +TR V + + GD ++A Sbjct: 123 KYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILL 229 ++ A KAL + P V + ++ A++W+ A L K K + R A+L Sbjct: 183 RQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S +G + AIE+ +L + + A+ AA++ ++++KKR A +L+K W+ Sbjct: 243 LSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E ++KR +L + + E+ ++++++ + +A Sbjct: 303 QPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 ++ P L+A IE+ + I W AL+A P W+ + ++ + W P Sbjct: 363 GDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + W+ P ++ L P ++ + L + S Sbjct: 423 VCENCASFDTLSWRRPEAPEIVGATGAQVLPLITGTPEGAAGPDASDIPEVELLEEEDTS 482 Query: 468 SFEDSTIHPLDPHI 481 + P P Sbjct: 483 VSDVGETLPQGPDT 496 >gi|163757398|ref|ZP_02164487.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43] gi|162284900|gb|EDQ35182.1| hypothetical protein HPDFL43_18347 [Hoeflea phototrophica DFL-43] Length = 631 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 243/494 (49%), Gaps = 9/494 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + ++ ++ F ++ P D+SI W +R S ++++ + A ++ + Sbjct: 2 MIRLLFFVALVLVLGFGFAWLADRPGDLSIVWQDRRIEMSLMTAVTVMVSLVAAVMITWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P ++ D+GY+AL TGL++ A + ARKM+ + E Sbjct: 62 LIRTIWLSPRLVSRYFRANKRDRGYQALSTGLLAAGAGDAMTARKMNKRSRGLLSADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+VQ AL E + + A ++ E + + P TR + LY E+ R G +A YA KA Sbjct: 122 LIHLLDVQTALIEGRNDDARKQFEALAEDPETRLLGLRGLYLEAQRQGATEAAHHYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236 +++P PW A + +W A+ L+ +++ E +R +A+LL AR+ + Sbjct: 182 AELAPHLPWAGAAALSFRTQEGKWDEALRLLDTQRQAGTLEALEADRKKAVLLTARARDR 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D + S DA+ +LK+ A++ A K+L+ + RKA ILE WKVNPHPEIA Sbjct: 242 LD-ADPLRSRDDALAALKVAPGFAPAAVIATKALLRNDNLRKAARILESAWKVNPHPEIA 300 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + +LKRA RLE++ + ++ V++ ALE D A KA + ++ Sbjct: 301 DAYVRARIGDTAADRLKRAERLEKLKPLNAQAYDTVARAALEARRFDLARQKAEASARLL 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + I+LLLA IE+A + + ++ +W A+ A DP W + DGY+S W P+SP++ L Sbjct: 361 PCEGIYLLLADIEEAETGDEGRVRHWLSQAVRAPRDPAWTA-DGYVSETWEPVSPVTGKL 419 Query: 416 CYFEWKIPTKSPEYISSENINF--SLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 FEWK+P + + S + A + + P + Sbjct: 420 DAFEWKVPVEQLSGPRYDADMPEKSFDRAMASLPPVREVAEPAAPSGPVVNPEPEALVEV 479 Query: 474 IHPLDPHIRQPDDP 487 + P+ P Sbjct: 480 AAAEAVTVVAPEAP 493 >gi|163742569|ref|ZP_02149955.1| HemY domain protein [Phaeobacter gallaeciensis 2.10] gi|161384154|gb|EDQ08537.1| HemY domain protein [Phaeobacter gallaeciensis 2.10] Length = 507 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 100/489 (20%), Positives = 200/489 (40%), Gaps = 15/489 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +L+++ + +++++ +++ V IT Y S + L +F +LF Sbjct: 5 LLKILVFVAIVAVLAFGAALLTETAGGVQITVAGTEYTLSALQSVIALAILVFVVWVLFK 64 Query: 61 VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + RF + K KGY+AL GLM++A+ LA M + Sbjct: 65 LLSLLLATLRFLNGDETAISRYFDKGRERKGYQALSDGLMALASGEGRLA--MAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E + ++ +TR V + + GD ++A Sbjct: 123 KYLEKPELTDLLTAQAAELAGDTKKAAEAYKRLVSNQSTRFVGVRGIMKQKLSEGDTDTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILL 229 ++ A KAL + P V + ++ A++W+ A L K K + R A+L Sbjct: 183 RQLAEKALSLRPKHEEVQDTLLTLQARAQDWAGARKTLTTKLKTGTLPRDVYKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ S +G + AIE+ +L + + A+ AA++ ++++KKR A +L+K W+ Sbjct: 243 LSASKAIVKEGATVEQQEQAIEANRLSPDLVPAAAMAARAYLARDKKRYAIRVLKKAWEA 302 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A+ + + E ++KR +L + + E+ ++++++ + +A Sbjct: 303 QPHPDLAHAFAEVEPTETAQERVKRFAQLSRLAPQHDETRLVMAELHIVAEDFPEARRAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 ++ P L+A IE+ + I W AL+A P W+ + ++ + W P Sbjct: 363 GDLVEREPDARALTLMAAIEKGEGASDAVIQGWLARALNAPRGPQWVCGNCNHIHAEWAP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + W+ P ++ L P ++ + L + S Sbjct: 423 VCENCASFDTLSWRRPEAPEIVGATGAQVLPLITGTPEGAAGRDASDIPEVELLEGEDTS 482 Query: 468 SFEDSTIHP 476 + P Sbjct: 483 VSDVGETLP 491 >gi|222150058|ref|YP_002551015.1| hypothetical protein Avi_4148 [Agrobacterium vitis S4] gi|221737040|gb|ACM38003.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 526 Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 155/516 (30%), Positives = 259/516 (50%), Gaps = 29/516 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+I Y ++ + F ++ P ++ I W +L S +++ + ++ + Sbjct: 1 MIRIIVYILIVLALGFGFSWLADRPGELQIVWQGQLIEMSLTAAATMIVAIVAVVMIGWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P + R D+GY+A+ TGL++ A N LAR+M + E Sbjct: 61 LVRTLWTSPHSMRRYFRARKRDRGYQAISTGLIAAGAGNAALARRMSARARGLVRADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ +LE Q AL E +++ A E M+ P TRE + LY E+ R+G +A++YA KA Sbjct: 121 LIMVLEAQAALIEGKHDDARRIYEQMVADPETRELGLRGLYVEATRLGAHEAARQYAEKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + +P PW +A ++ W+ AI L+Q++ E +R +A+LL A++++ Sbjct: 181 AEDAPYLPWAAKAALEYRCQTSAWNEAIHLLDQQRVAGVLARAEADRLKAVLLTAKAMDQ 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D GD A+ +A+ +LKL + + AS+ AA++L+ ++ RKA +LE WK+ PHP+IA Sbjct: 241 LD-GDPAAARDNAMNALKLAKDLVPASVTAARALLREDNLRKAGSVLETAWKLAPHPDIA 299 Query: 297 NIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++Y + V +LKRA RLE++ +V SL++V+++ALE +A AKA A ++ Sbjct: 300 SLYVRARGGDGAVDRLKRAERLEQVKPNNVYSLLVVAEMALEARDFTKARAKAEAAARMQ 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 + +FLLLA IE A + + +I YW AL A DP W++ DG +S WLP SP+S L Sbjct: 360 ASERVFLLLADIEDAETGDQARIRYWMAQALKAPRDPSWVA-DGQVSEKWLPYSPVSGRL 418 Query: 416 CYFEWKIP--------------------TKSPEYISSENINFSLEMAYPADDLQSMLNNG 455 FEWKIP + P E S+ + Sbjct: 419 DAFEWKIPYAQLSGPVEDGTVISGAAALAELPPLGQGEKPASSIPARKIDTLPEQPEALA 478 Query: 456 KKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491 + P+ + + P PDDPG+++ Sbjct: 479 PSSSQPTASPKPTPKSHEPEPF--FGGAPDDPGVRD 512 >gi|254473094|ref|ZP_05086492.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062] gi|211957815|gb|EEA93017.1| hypothetical protein PJE062_2166 [Pseudovibrio sp. JE062] Length = 613 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 117/493 (23%), Positives = 224/493 (45%), Gaps = 13/493 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ +F + L+ ++ P V++ W + + S + + A I+++ Sbjct: 1 MVRVLIFFAFVFLLALGGAWMADRPGVVTLEWQGYVVQASLLTTVVAFGASIVASIVVWG 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P ++ H + +R DKGY AL GLM++ + + ARK + +E Sbjct: 61 FFRLIWKSPTLVSHFMQRRRKDKGYDALSQGLMALGSGDTLHARKFGLKADKLLD-GDEP 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q + + + + + E ML+ + ++ LY E+ R + +A+ +A +A Sbjct: 120 AARLLLAQASQLDGDHAESRRRFEAMLEDDRSMAVGLHGLYIEAERESEPAAARHFAEEA 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236 ++ P W AV+ ++ +W AI L + + + K R +A+LL AR+LE Sbjct: 180 FNLVPGLRWAGNAVLGYQAVSGDWEEAIATLERNYAARMLDKKTLRRQKAVLLTARALEL 239 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ + + A+E+ L + + A+I AA+ + RKA ILE WK++PHP++A Sbjct: 240 ENE-NPDRARTLAVEAHGLAPSLVPAAIVAARLRTRAGEIRKASKILEATWKLSPHPDLA 298 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y H+ ++V +L R L + S E + ++ A+E D+A + ++ Sbjct: 299 EAYAHVRPGDSVTDRLSRVRTLASMRAYSSEGAIAIAVAAIEAKKFDEAREQLKRVLRSE 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + FLL+A +E+ + +I W A+ A D +WI+ DG +S+ W P+SP + + Sbjct: 359 PTQRAFLLMADLEEREHGDQGRIREWLSRAVRAPHDKVWIA-DGVVSANWAPVSPKTGRV 417 Query: 416 CYFEWKIPTKSPEY-----ISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470 +EW P + + + + + E+A P L + P + Sbjct: 418 DAYEWATPENTMDQDQTIEVIDDKLFEPPELAAPVQVLDEPVKADIVVPKPQDVDTPAAP 477 Query: 471 DSTIHPLDPHIRQ 483 P + + Sbjct: 478 KEEPAPAPAPVEK 490 >gi|159045958|ref|YP_001534752.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12] gi|157913718|gb|ABV95151.1| hypothetical protein Dshi_3418 [Dinoroseobacter shibae DFL 12] Length = 502 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 96/483 (19%), Positives = 192/483 (39%), Gaps = 16/483 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW----- 55 +L+++ + +++ + ++ E V I+ + + SP + + L A Sbjct: 5 LLKILIFVTLVAALTFGATLLMETGEQVRISLASTEFTLSPVAAVVLSLVLLGAAYLLFK 64 Query: 56 --ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 LL A +F + + KG++AL G+M++A+ +A M + Sbjct: 65 LAGLLLATLKFLNGDETAISRYFMRNRERKGFEALAQGMMALASGEGRVA--MAKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E + ML T+ V L + GD +A Sbjct: 123 RYLGRPDLTQLLTAQAAELSGDRAKATETYKKMLTDERTKFVGVRGLLHQKLSEGDTETA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 A KA + P V + +++ + W+ A L K K+ R A+L Sbjct: 183 MALAEKAFALKPRNGEVQDTLLRLQAGDENWAGARKTLAAKLKSGDLPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + + G M + A E+ +L + ++ AA+ I K+R+A +L K W++ Sbjct: 243 YSEAADAVEAGKMDKAEAHANEANRLAPGLVPSAALAARMAIRAGKQRQATKLLRKAWEL 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 NPHPE+A Y ++ + T ++KR L + N ES ++++++ + A Sbjct: 303 NPHPELAAAYAEIVPDETAAARIKRFEALVKPNPNHDESRLLMAELFIAAEDFPAARKAM 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLP 407 + P ++A +E+ + + W A+ A P W ++ + + W P Sbjct: 363 GDLYETKPNARSLTIMAAVERGEGSDDAIVRAWLAKAVTASRGPQWTCENCNNIHASWTP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + W P +S +++ L + A D + + ++ +P + ++ Sbjct: 423 VCGNCGAFDSLSWVEPPESEIALTNSAEMLPLIVGAIA-DQSAKKDPEEEVIVPDVVDIT 481 Query: 468 SFE 470 E Sbjct: 482 PTE 484 >gi|84514840|ref|ZP_01002203.1| HemY domain protein [Loktanella vestfoldensis SKA53] gi|84510999|gb|EAQ07453.1| HemY domain protein [Loktanella vestfoldensis SKA53] Length = 479 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 91/477 (19%), Positives = 178/477 (37%), Gaps = 15/477 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++++ + ++ + ++ +I + ++ L + L Sbjct: 5 LIKITAFILTVTALTYGAAMLYDVDGGATIAVMGIEFTLRTLDMVVALVALVVLVWLGLR 64 Query: 61 VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + F + + KGY+AL G+M++A+ LA M + Sbjct: 65 LLALLAASYHFLNGDETAISRYFDRNRERKGYEALAEGMMALASGEGHLA--MTKAARAE 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 H L LL Q A A E + +L TR V + + GD + A Sbjct: 123 KYLHQPQLTNLLTAQAAEMTGDRRKAEETYKKLLADDRTRFVGVRGIMKQKLAEGDTDLA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA + P + ++Q +W A L K K+ R A+L Sbjct: 183 LKLAQKAFALKPKHAETQDVLLQLQADKADWKGARQTLGAKLKSGTLPRDVHKRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + + D+G+ I + AI + +L + I A++ AA+ I+Q R A +L K W Sbjct: 243 LSEARDILDEGNPIEAREAAIAANRLSPDLIPAAVMAARGYIAQGNARYASRVLVKTWTA 302 Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP+IA + ++ + T +LKR L + + E+ ++++++ + A Sbjct: 303 QPHPDIATAFAEIVPDETPQARLKRFATLTKATPDHPEAKMLMAELHVAAEDFPAARRDI 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLP 407 ++ P L+A +E+ + + W AL A P WI D ++ W P Sbjct: 363 ADLVETDPTARSLALMAAVERGVGADDAVVRGWLTRALTAPRGPQWICDKCQHIHPQWGP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIK 464 + WK P + + L + +++ ++ + K Sbjct: 423 VCGNCAAFDTLSWKRPPAGEVSMPAGTEMLPLIVGSQPVPDETLPDDAETVAKDDAK 479 >gi|260575763|ref|ZP_05843759.1| HemY domain protein [Rhodobacter sp. SW2] gi|259021916|gb|EEW25216.1| HemY domain protein [Rhodobacter sp. SW2] Length = 491 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 98/458 (21%), Positives = 173/458 (37%), Gaps = 15/458 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF------- 53 +L+++ + VI+ + ++ + I P L + Sbjct: 6 LLKVVLFVAVIAGLTFGAGRLTDTGGGLQIAVYGYEVTLGPLQALVGALLLVVAVWLLLK 65 Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A LL AV +F + + KGY+AL G++++A+ +A + Q Sbjct: 66 AIGLLVAVLKFLNGDETAVSRYFDRNRERKGYQALSEGMIALASGEARVA--LSRAAKAQ 123 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L LL Q A A E + +L TR V L + GD +A Sbjct: 124 KYLGKPELTTLLTAQAAELAGDSARATEAYKALLTDEKTRFVGVRGLMLQKVASGDKATA 183 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KA + P + ++Q +W A T L K + + + R A+L Sbjct: 184 LKLAEKAFAMKPRHTETQDVLLQLQASQADWKGARTTLGAKLRAGTLPREVFRRRDAVLA 243 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + D+ I S AIE+ KL + I A+ AA+S I++ + A +L+K W+ Sbjct: 244 LQEAKTVFDESASIESREAAIEANKLSPDLIPAAAMAARSYIAKGDAKNATRVLKKAWEA 303 Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + E+ +LKR L I+ E+ ++++++ L A Sbjct: 304 RPHPDLAAAFAEIEPTESAQARLKRFKLLTAIHPTHEETRLLLAELNLAAEDFPAARRII 363 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 P ++A IE+ + + W AL A P W D + + W P Sbjct: 364 GDLATSHPTGRSLAIMAAIERGEGADDAVVRGWLARALTAPRGPQWCCDKCQGIHAQWTP 423 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPA 445 + W+ P + S+ L + P Sbjct: 424 ICDNCGAFDTLSWREPPEGSRPSSTGTELLPLIVGSPK 461 >gi|209551274|ref|YP_002283191.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537030|gb|ACI56965.1| HemY domain protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 536 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 168/523 (32%), Positives = 264/523 (50%), Gaps = 34/523 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++RL+ + + L+ F ++ P D+S+ W ++Y+T V S + + A ++ + Sbjct: 2 LIRLVAFALFVLLLAYGFSWLADRPGDLSLIWEGQIYQTKLIVAASAIIALIAAVMIAWW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 62 FVRLVWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 121 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +Y+ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 122 LISLLEAQAALIEGRYDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K + NR A+LL AR+ E Sbjct: 182 ADNAPYLPWAAQATLEYRSQAGRWDDAIRLLEQQKAARVVEKADANRLHAVLLTARAGEK 241 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + DA ++LKL + I A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 242 LE-GNPAGARDDAQQALKLAADFIPAALVAAKALFREGGVRKAASILEQAWKSAPHPEIG 300 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y ++T+ +LKRA RLE + +VESL++V++ AL+ +A AKA A ++ Sbjct: 301 QAYVRARSGDSTLDRLKRAERLEGLRPNNVESLLVVAQAALDAQEFAKARAKAEAAARMQ 360 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ L Sbjct: 361 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRL 419 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMA-------------YPADDLQSMLNNGKKNHLPS 462 FEWK P E + +E A P +D + + + Sbjct: 420 DAFEWKAPFGQIEGPLEDGSVPPIETALKTLPPLRDVRPESPVNDHRIIELERAATIAEA 479 Query: 463 IKKVSSFEDSTIHPLDPHI--------------RQPDDPGIKE 491 ++ + + P++P PDDPG+++ Sbjct: 480 VRPTPAPAPAKSKPVEPVSGKTPAPGEAKPFFGGLPDDPGVRD 522 >gi|190893756|ref|YP_001980298.1| hypothetical protein [Rhizobium etli CIAT 652] gi|190699035|gb|ACE93120.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652] Length = 535 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 156/463 (33%), Positives = 243/463 (52%), Gaps = 7/463 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + ++ L+ F + P D+S+ W ++Y+T V +S + + A ++ + Sbjct: 1 MIRLVVFALLVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIGWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 61 FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + DA+++LKL + + A++ AAK+L + RKA ILE+ WK PHPE+ Sbjct: 241 LE-GNPAGARDDALQALKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEVG 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y ++T+ +LKRA RLE + +VESL++V++ AL+ +A AKA A +I Sbjct: 300 QTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARAKAEAAARIE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ + Sbjct: 360 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 418 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458 FEWK P E + + + Sbjct: 419 DAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESP 461 >gi|327188880|gb|EGE56072.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512] Length = 580 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 166/523 (31%), Positives = 264/523 (50%), Gaps = 34/523 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + ++ L+ F + P D+S+ W ++Y+T V +S + + A ++++ Sbjct: 46 MIRLVVFALLVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 105 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 106 FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 165 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 166 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 225 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 226 ADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 285 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + GD + DA+++LKL + + A++ AAK+L + RKA ILE+ WK PHPEI Sbjct: 286 LE-GDPAGARDDALQALKLAADLVPAALIAAKALFREGGLRKAASILEQAWKSKPHPEIG 344 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y ++T+ +LKRA RLE + +VESL++V++ AL+ +A AKA A +I Sbjct: 345 QTYVKARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDTQEFAKARAKAEAAARIE 404 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WLP+SP++ + Sbjct: 405 PREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWLPVSPVTGRI 463 Query: 416 CYFEWKIPTKSPEYISSENINFS--------------------------LEMAYPADDLQ 449 FEWK P E + + +E+ A + Sbjct: 464 DAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESPVNDHRIIELERAATIAE 523 Query: 450 SMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI-RQPDDPGIKE 491 ++ ++ + + + P PDDPG+++ Sbjct: 524 AVRPAPAPAKPKPVEPAAGDKAPVPNEAKPFFGGLPDDPGVRD 566 >gi|299133147|ref|ZP_07026342.1| HemY domain protein [Afipia sp. 1NLS2] gi|298593284|gb|EFI53484.1| HemY domain protein [Afipia sp. 1NLS2] Length = 545 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 126/527 (23%), Positives = 229/527 (43%), Gaps = 43/527 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ + ++++ V+ V ++W TS V+ + + A IL++ Sbjct: 1 MVRIFSFLILLTVAALGATWVADQSGGVVLSWNGWRAETSLPVLALLALILVIAAILVWT 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R F PA L H++ K A+ GL+++ + LA + ++ Sbjct: 61 IVRAFWKTPARLRRYRHEKREAKARHAITQGLIAVGTGDSSLAHRHAGTAK--RLAEHDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A E A M + R + L+ E+ R DL++A A +A Sbjct: 119 LTLLLQAQTAQLEGDRPGAQHAFHAMAERQDMRLLGLRGLFIEAQRNDDLHTAVAMAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 L I+P +PW + AV+ +W A+ L+ + R R +LL AR+LE Sbjct: 179 LKIAPSSPWASHAVLGFRCAQSDWDGALALLDSNYSASLIENAPYRRQRGVLLTARALE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ D S A+E++K + A++ AAK N+ R+A +E W NPHP++A Sbjct: 238 LEERDRDLSRKSAMEAIKFAPQLVPAAVLAAKFYSEDNQVRRAMRTIEVAWNANPHPDLA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H+ ++ +L R L + + ES + +++ A+E +A + Sbjct: 298 DAYAHVRLGDSARERLARVELLAQKAPDHRESRLAIARAAIEASEFGRAREALAPLLTTM 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 + + LL+A++E+A +H+ + WT A+ A PDP W + DGY+S W P+SP++ L Sbjct: 358 -TQRVALLMAELERAGNHDEGRAREWTARAVRAAPDPAWTA-DGYVSDRWRPVSPVTGRL 415 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSML------------NNGKKNHLPSI 463 F+W P + ++S++++ + E ++ + L P Sbjct: 416 DAFQWVTPVAA---LTSDHVDVAAEASHLPEKLPEPASVAIESKVAPAEPEPAVEKAPVE 472 Query: 464 KKVSSFEDSTIHPL------------------DPHIRQPDDPGIKEQ 492 + + + P P +R PDDPG+ E Sbjct: 473 AAPAPVKTDNVAPPVFRARPAGEARSPAPSAIIPLVRAPDDPGVPED 519 >gi|118592001|ref|ZP_01549395.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614] gi|118435297|gb|EAV41944.1| hypothetical protein SIAM614_25032 [Stappia aggregata IAM 12614] Length = 669 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 121/506 (23%), Positives = 233/506 (46%), Gaps = 23/506 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW---------GNRLYRTSPFVILSILYFF 51 M+R++ +F ++ V F ++ P + I+W G ++ SP ++ F Sbjct: 1 MIRVLFFFALLFAVALGFAWMADLPGTIQISWPVYENGQQVGTDIWEQSPVIVGLAAAVF 60 Query: 52 LFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111 L ++++ R L P + +R DKGY AL GL+++ N LAR+ + Sbjct: 61 LAVFLVIVWAIRVVLKSPQIASRFFRRRRKDKGYNALSQGLIALGTGNAKLARRY--ALD 118 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 +E LL Q A + + A ++ E ML+ PAT+ ++ L+ E+ R + Sbjct: 119 ADKLLDDEPAAKLLLAQTAQLAGKDDEARQRFEAMLEDPATKALGLHGLFIEAERHKEPV 178 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAI 227 +A+ YA +A SP W +AV+ +A W A+ L + K + K + R RA+ Sbjct: 179 AARHYAEEAAKTSPGLEWAGKAVLGYQAVAHHWDEALKTLERNYAAKMLDKKTYRRQRAV 238 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +L A ++ + G+ +Y A E+ L + + A++ ++ + RKA +LE W Sbjct: 239 ILTALAM-KLEDGEPERAYSLAKEAHGLALDLVPAAVLTSRLATRRGDIRKASKVLEATW 297 Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 ++ PHP++A Y H+ ++ V +LKR L + E + +++ A+E ++A Sbjct: 298 RLFPHPDLAETYAHVRTGDSAVDRLKRVKSLSAQRANTPEGALAIARAAMEAREFEEARQ 357 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406 + ++ P ++ FLL+A++E+A + + + W A+ A D +W++ DG +S+ W Sbjct: 358 QLKKVLQSEPTRQAFLLMAEVEEAENGDRGRTRDWLARAVSAPLDKVWMA-DGIISAEWQ 416 Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466 P+SP++ L F+W P +S E+ + + A L S + ++ Sbjct: 417 PVSPVTGKLDAFQWATPGS----LSDEDGPLLEDSLFDAPALPSATVAEPVRPVSDVEDS 472 Query: 467 SSFEDSTIHPLDPHIRQPDDPGIKEQ 492 + + + P +P Sbjct: 473 AVVLEVEPVTKTTDPK-PSEPKSDAD 497 >gi|153008313|ref|YP_001369528.1| HemY domain-containing protein [Ochrobactrum anthropi ATCC 49188] gi|151560201|gb|ABS13699.1| HemY domain protein [Ochrobactrum anthropi ATCC 49188] Length = 553 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 137/504 (27%), Positives = 238/504 (47%), Gaps = 16/504 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ YF V++ + F ++ P ++ +T+ Y ++ + + A ++L+ Sbjct: 1 MLRVLFYFVVVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAMLILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M+ P TR + LY E+ R+G L++A+ YA +A Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGALDAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + A++ Q +W A+ ++ +K+ + RA LL A+++ Sbjct: 181 ASQAPQLEWASSAMMGQLCAEGDWDAALKLVDARKQALAHSKDVVKKERAALLTAKAMAV 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D + A+E+ KL + + A++ AA++L S RK ILE WK PHP+IA Sbjct: 241 ADV-DHAQAKALALEANKLTPDLVPAAVVAARALFSDGDMRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ + Sbjct: 300 STYVYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+S W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---------KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466 FEWK+P + PE + ++ + + Sbjct: 419 NSFEWKVPVVELAPAIEAEKPEIKGPVEAKPGNPLVLAEPKDKAGVVDASAVVERKSPVR 478 Query: 467 SSFEDSTIHPLDPHIRQPDDPGIK 490 E I P ++ P +K Sbjct: 479 DVEEAEVIVPAAEPVKVSPAPSVK 502 >gi|15966835|ref|NP_387188.1| hypothetical protein SMc03234 [Sinorhizobium meliloti 1021] gi|307301663|ref|ZP_07581422.1| HemY domain protein [Sinorhizobium meliloti BL225C] gi|307316313|ref|ZP_07595757.1| HemY domain protein [Sinorhizobium meliloti AK83] gi|15076107|emb|CAC47661.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306898153|gb|EFN28895.1| HemY domain protein [Sinorhizobium meliloti AK83] gi|306903361|gb|EFN33950.1| HemY domain protein [Sinorhizobium meliloti BL225C] Length = 545 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 161/533 (30%), Positives = 262/533 (49%), Gaps = 44/533 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + ++ + F ++ P ++S+ W +L S SIL A +++ Sbjct: 1 MIRILFFVLLVLCLALGFAWLADRPGELSLIWQGQLIEMSLMRAASILISLFAAVLIVVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + R D+GY+AL TGL++ A + LARKM + + E Sbjct: 61 LLRTIWLSPHTVTRYFRSRKRDRGYQALSTGLIAAGAGDANLARKMAARTRNLISSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q AL E +Y+ A +K E M P TRE + LY E+ R+G +A++YA +A Sbjct: 121 LIHLLEAQTALIEGKYDDARKKFEAMADDPETRELGLRGLYLEAKRLGANEAARQYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 + +P PW T A + A++W AI L+Q + E +R +A+LL AR++E Sbjct: 181 SEKAPHLPWATLATLDHRSQARQWDEAIRLLDQSRAAHVLEKNEADRKKAVLLTARAMER 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D ++ DA +LKL D + A++ AAK+L + RK ILE++WK++PHP+IA Sbjct: 241 LD-ADPKSARDDAQAALKLDDRLVPAALVAAKALFREENLRKGASILERMWKLDPHPDIA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y ++ + +LKRA +LE + + +L V++ AL+ + A KA A ++ Sbjct: 300 RLYVRARGGDSALDRLKRAKKLESLRSNNAVALATVAEAALDARELALARTKAEAAARLE 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ IFLLLA IE+A++ + +I +W AL + DP W + DG S VWLP+SP+S L Sbjct: 360 PRESIFLLLADIEEADTGDEGRIRHWMAQALKSPRDPAWTA-DGVTSPVWLPVSPVSGRL 418 Query: 416 CYFEWKIPTKSPEYISSEN-------INFSLEMAYPADDLQSMLNNGKKNHLPSIKK--- 465 FEWK P + + I +A ++ P+ ++ Sbjct: 419 DAFEWKAPPSQIAAATEDGHLNPDQAIRSLPPVATVPRPVEEPAPERTVEAAPTAERDQT 478 Query: 466 ---------------------------VSSFEDSTIHPLDPHIRQPDDPGIKE 491 + +D+ P R PDDPG++E Sbjct: 479 ERERVERERAGPEKAISVPDRKEPAASPAKGKDAEEAPDPFFGRPPDDPGVRE 531 >gi|148251900|ref|YP_001236485.1| HemY domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146404073|gb|ABQ32579.1| putative exported protein of unknown function with HemY domain (porphyrin biosynthesis) [Bradyrhizobium sp. BTAi1] Length = 641 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 117/502 (23%), Positives = 216/502 (43%), Gaps = 16/502 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + ++ L V+ DV + WG + V + L + A +L++ Sbjct: 1 MLRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRIAMTLPVFVLALGLTITACVLVWN 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L P + + R + +G A+ GL++I ++ AR+ ++ Sbjct: 61 LISALLRAPGRIRNHHRARRHQRGRHAITHGLLAIGHGDLTAARQHADAAK--RLAGDDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A + A M + TR + L+ E+ R D +A A +A Sbjct: 119 LTLLLHAQAAQLGGDRDGAQRAFRAMAERHDTRLLGLRGLFIEAQRADDAYAAVMIADEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236 L ++P+A W + AV+ +W+ A+ L+ + + R R +LL AR++ Sbjct: 179 LKLAPNATWASHAVLGFRCAQGDWNGALAILDSNYTAGMIDKPTYRRQRGVLLTARAIA- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + A+E++KL I A++ AAK ++ R+A I+E W PHP++A Sbjct: 238 LETENRDLARASAMEAVKLAPTLIPAAVLAAKFESEAHQVRRAMKIIEAAWTAGPHPDLA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H+ ++ +L R L ++ +E + +++ A++ +A A Sbjct: 298 DAYAHVRLGDSARQRLTRIENLAARTRDHIEGALAIARAAIDAAEFGRARAAL-APFTDD 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A++E+ + K WT A+ A DP W + DGY+S W P+SP++ L Sbjct: 357 PTQRVAMLMAELERTEHGDAGKSREWTLRAVRARHDPAWTA-DGYVSDHWRPISPVTGRL 415 Query: 416 CYFEWKIPTKSPE------YISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469 F+W+ P S SSE + L A + + ++ S V + Sbjct: 416 DAFQWQTPVASLPSERNSVIESSEFADAVLAPPTRATIPEGLAEPPREVARQSQLDVIAP 475 Query: 470 EDSTIHPLDPHIRQPDDPGIKE 491 P P DP + Sbjct: 476 TPQDNVPPRPAETAVSDPAVDT 497 >gi|126732179|ref|ZP_01747980.1| HemY domain protein [Sagittula stellata E-37] gi|126707261|gb|EBA06326.1| HemY domain protein [Sagittula stellata E-37] Length = 518 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 105/492 (21%), Positives = 192/492 (39%), Gaps = 22/492 (4%) Query: 12 SLVICSFIIVSHYPED----VSITWGNRLYRTSPFVILSILYFFLFAWI-------LLFA 60 + + + IT Y +P +++ L A L A Sbjct: 12 AALTLGLGYLIEADGTGLAQARITLNGVEYTLTPVMMVIGALVLLLAVWLLLKLASFLVA 71 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + RF L H+ KGY AL G+M++A+ LA + + H Sbjct: 72 LLRFINGDETALSRHFHRNRERKGYAALSDGMMALASGEGRLA--IAKAQKAEKYLHKPE 129 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L L+ Q A A E + +L TR + + + GD N+A + A +A Sbjct: 130 LTDLVTAQAAEMMGDRKKAEETYKKLLTRDGTRFVGIRGIMKQKLASGDTNTALQLAERA 189 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + P V + ++Q +W+ A L K K+ + R A+L ++++ E Sbjct: 190 FALKPKHEEVQDTLLQLQAEKADWTGARKTLQAKLKHGTLPRDVYKRRDAVLALSQATEI 249 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ + IA+ AIE+ + + + A+ AA++ I+Q + R A +L+K W+ +PHP++A Sbjct: 250 ENRDESIAAAEKAIEANRNSPDLVPAAAKAARAYIAQKRPRNAIRVLKKAWETHPHPDLA 309 Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + T ++KR + L IN + E+ ++ +++ L +A ++ Sbjct: 310 AAYAEIEPNETPDERIKRFVPLTRINPDHRETRLLKAELNLAAEHFPEARRSLGDLVEKE 369 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKT 414 P + ++A IE+ + W A+ A P W+ D+ + W P Sbjct: 370 PDARVLAIMAAIEKGEGAPDQVVRGWLAKAVTAPRGPQWVCDNCKTIHGEWRPTCTNCGA 429 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474 WK P +S + ++ L + D + P + VS E Sbjct: 430 FDTLSWKTPAQSEVVLPAQANMLPLIIGALEDKSPAEDPAVVPEANPGMIDVSPVERE-- 487 Query: 475 HPLDPHIRQPDD 486 P P +P D Sbjct: 488 -PKAPDATEPAD 498 >gi|254438357|ref|ZP_05051851.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307] gi|198253803|gb|EDY78117.1| HemY N-terminal domain protein [Octadecabacter antarcticus 307] Length = 475 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 94/475 (19%), Positives = 175/475 (36%), Gaps = 28/475 (5%) Query: 13 LVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL-------FAVSRFF 65 ++ +I G + S + L + L+ A +F Sbjct: 2 AATFGATMLLEMEGSATIDIGGQAASFSVIEMAIGLIILVALVWLVSKLVGLAVAAFKFL 61 Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 + + KGY+AL G++++A+ LA M + L LL Sbjct: 62 NGDETAISRYFSRNRERKGYEALSEGMLALASGEGRLA--MAKANRAEKFLERPELTNLL 119 Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A A +L TR V + + + GD ++A A KA I P Sbjct: 120 TAQAAELAGDRKTAELTYRKLLANDKTRFVGVRGIMKQKLQDGDTDTALLLAQKAFAIKP 179 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGD 241 + +++ +W A L K K + R A+L ++ + +G Sbjct: 180 KHVETQDTLLRLQAEKSDWKGARETLTAKLKTGQLPRNVHRRRDAVLALSEAKGVFAEGA 239 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + + AIE+ ++ + + A++ AA+S +++N R A +++K W + PHP++A + Sbjct: 240 TLEAQEAAIEANRMSPDLVPAAVMAAQSHVNKNADRAATRVIKKAWDIAPHPDLAAAFAA 299 Query: 302 LLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + E+ +LKR L + + + E+ ++++++ L +A + P Sbjct: 300 IAPHEDPAVRLKRFGALTKAHPDHPETRMLLAELNLAAEDFPEARRAITELVAQDPTARS 359 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYFE 419 ++A IE+ + W AL A P WI D+ ++ W+P+ Sbjct: 360 LTIMAAIERGEGSTDAVVRGWLSKALIATRGPQWICDNCQHIHPAWVPVCVNCSGFDTLA 419 Query: 420 WKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474 W+ P K E+A PA L GK V E + Sbjct: 420 WREPPKG-------------EVAMPAGVEMLPLIVGKIEPSKDTTDVEILEAEVV 461 >gi|265982894|ref|ZP_06095629.1| HemY domain-containing protein [Brucella sp. 83/13] gi|264661486|gb|EEZ31747.1| HemY domain-containing protein [Brucella sp. 83/13] Length = 539 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 131/492 (26%), Positives = 232/492 (47%), Gaps = 15/492 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + +E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 243 LD-THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFPHPDIA 301 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 302 ATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475 FEWK+P + ++E+ P S + Sbjct: 421 NSFEWKVPVV--------ELAPAIEVEKPEIKAPLPEIKAAAPISAPESTRESASELVAE 472 Query: 476 PLDPHIRQPDDP 487 P+ +R+ P Sbjct: 473 PVPAPVRETAAP 484 >gi|254717951|ref|ZP_05179762.1| hypothetical protein Bru83_00095 [Brucella sp. 83/13] gi|306838961|ref|ZP_07471785.1| HemY domain protein [Brucella sp. NF 2653] gi|306405964|gb|EFM62219.1| HemY domain protein [Brucella sp. NF 2653] Length = 537 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 131/492 (26%), Positives = 232/492 (47%), Gaps = 15/492 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + +E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHAHAKAIVLEANKLAPDLVPAAVIAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 ATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475 FEWK+P + ++E+ P S + Sbjct: 419 NSFEWKVPVV--------ELAPAIEVEKPEIKAPLPEIKAAAPISAPESTRESASELVAE 470 Query: 476 PLDPHIRQPDDP 487 P+ +R+ P Sbjct: 471 PVPAPVRETAAP 482 >gi|294679027|ref|YP_003579642.1| HemY domain-containing protein [Rhodobacter capsulatus SB 1003] gi|294477847|gb|ADE87235.1| HemY domain protein [Rhodobacter capsulatus SB 1003] Length = 480 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 91/477 (19%), Positives = 170/477 (35%), Gaps = 15/477 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLF-------A 54 +++ + V+ + +S E + I + ++ + Sbjct: 6 IKISLFVAVVVGLAFGAAWLSDLGETIRIIAFGIELNLGALQAVILIGLAILTIWLALKV 65 Query: 55 WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114 +FA RF + + KGY+AL G++++A+ LA + Sbjct: 66 LGFVFAFIRFVTGDETAISRYFDRNRERKGYEALAEGMLAVASGESKLAA--SKASKAER 123 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L LL Q A+ A E +L TR V L + GD ++A Sbjct: 124 YLRRPELTNLLTAQAAMMNGDTRKAEEVYRKLLADQRTRFVGVQGLLSQKLAEGDTDTAV 183 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230 + A KA ++P V + + +W A L K + R A+L + Sbjct: 184 KLAQKAFALNPKNLEVQNTLFKLQTEVGDWKGARDVLLAKMRQGQLPKDVHKRRDAVLAL 243 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + D G I + AI + K + I A+ AAK+ + + A +L K W+ Sbjct: 244 QEAKAVLDGGTSIEAQEAAIAAAKASPDLIPAAAMAAKAHYDKGDAKSATRVLLKAWEAQ 303 Query: 291 PHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP++A ++ ++ E+ +LKR +L + + E+ ++ +++ + A Sbjct: 304 PHPDLAAVFASMVPGESATERLKRFEKLLSLRPDHEETRLLRAELCIAAEDFPAARRALG 363 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPL 408 ++ P + L+A IE+ + + W AL A W D + S W P+ Sbjct: 364 NLVEANPTSRVLTLMAAIERGEGEDDAVVRGWLAKALTAPRGKQWCCDKCQNIQSQWGPV 423 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 W+ P + + + L +A G L +K Sbjct: 424 CDNCGGFDTLSWREPAHNNMPLPNGAEMLPLIVAKGTKADAGATLEGTARALNEREK 480 >gi|310817089|ref|YP_003965053.1| HemY domain protein [Ketogulonicigenium vulgare Y25] gi|308755824|gb|ADO43753.1| HemY domain protein [Ketogulonicigenium vulgare Y25] Length = 514 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 98/505 (19%), Positives = 193/505 (38%), Gaps = 21/505 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLF 59 +L+++ + +++ V + ++ P +T G P +++I L W +L Sbjct: 5 LLKILTFVVIVTGVTAGAVWLAEMPGGAVVTLGGVEVTLRPLESVVAIAIVMLLFWAVLR 64 Query: 60 AVSR------FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + F + + KG KAL ++++AA A + Sbjct: 65 LLGLLLAVLRFINGDDTAVSRYFSRGRERKGMKALSDSVLALAAGEAKEALARAKVADK- 123 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + ++L A + ++A E + +L TR A+ L + GD +A Sbjct: 124 -YLGAPDVTHVLLAHTAERAGETHLAEETYKELLTSDRTRFVALQGLMKQKLTAGDTVTA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A A P+ V + +++ + +W+ A L +K + + R A+L Sbjct: 183 LKLAEAAFKARPENVEVQDVLLRLQAESSDWAGARATLGEKARRGALPRDVYRRRDAVLA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ + D I + AIE+ +L + + A++ AA+S I R A +L K W+V Sbjct: 243 LSEAQAVFDDKVPIDARERAIEANRLSPDLVPAAVMAARSYIKDGNPRYATRVLRKAWEV 302 Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + ++ + +L R L + + E+ ++ +++ + G A Sbjct: 303 QPHPDLAEAFAEIMPDERPDQRLARFETLTNLRTDHAENKMLRAELLIANGDFPAARRAL 362 Query: 349 MLAMK-IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWL 406 ++ L+A IE+ + + W AL A P W+ G + + WL Sbjct: 363 GELVEGADATSRSLALMAAIERGMGADESVVRGWLTRALTAPRGPQWVCGQCGKVHAQWL 422 Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPAD--DLQSMLNNGKKNHLPSI- 463 P+ W P S + L + P DL + P+ Sbjct: 423 PVCASCHGFDTLAWTTPPASDFAMPGGAAMLPLIVGAPVAPVDLSGDVVEQAVKPAPTPA 482 Query: 464 --KKVSSFEDSTIHPLDPHIRQPDD 486 KV E+ I P P + P++ Sbjct: 483 PQTKVEDAEEEVILPPPPDVELPEE 507 >gi|254504335|ref|ZP_05116486.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11] gi|222440406|gb|EEE47085.1| HemY N-terminal domain protein [Labrenzia alexandrii DFL-11] Length = 660 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 116/484 (23%), Positives = 225/484 (46%), Gaps = 11/484 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ +F ++ L F ++ P +S++W ++ P V+ ++ L A++++ Sbjct: 11 MIRVLIFFAMLFLAALGFAWMADLPGTISVSWNGYVWEQPPVVVALVVGLVLVAFLVVIG 70 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R L P + +R DKGY AL GL+++ N +AR+ + + E Sbjct: 71 VIRAILKSPQIAGRFFKQRRKDKGYTALSQGLIALGTGNAKMARRY--GLDADKLLNEEP 128 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q A + A ++ E ML P T+ ++ L+ E+ R + +A+ YA +A Sbjct: 129 ATKLLLAQTAQLAGKDGEARQRFEAMLDDPNTKTLGLHGLFVEAERQREPVAARHYAEEA 188 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236 + +P W +AV+ +A W A+ L + K + K + R RA++L A + Sbjct: 189 VKAAPGLEWAGKAVLGYQAVAHHWDEALKTLERNYTSKLLDKKAYRRQRAVILTALA-HK 247 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D ++ A E+ L + A++ ++ + RKA ++E W+++PHPE+A Sbjct: 248 LEDNDPDRAFSLAKEAHGLALELVPAAVITSRLATRRGDIRKASKVIEATWRLSPHPELA 307 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y+H+ ++ V +LKRA L + E + ++K ALE ++A + ++ Sbjct: 308 ETYSHVRTGDSAVDRLKRAKSLAAQRANTAEGAIAIAKAALEAREFEEARTQLKKVLQSE 367 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + F+L+A++E+ + + ++ W A+ A D WI+ DG +SS W +SP++ L Sbjct: 368 PTRAAFILMAEVEETETGDKGRVRDWLARAVKASLDKAWIA-DGVVSSEWQAVSPVTGKL 426 Query: 416 CYFEWKIPTKSPE--YISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 F+W P E + E+ F + + + + + + + D Sbjct: 427 DAFQWSSPGSLNEEDGVLLEDSLFEAPVLPASTLAKDPAAEPVEPVVTAASQSKDASDEK 486 Query: 474 IHPL 477 Sbjct: 487 PEEA 490 >gi|83950381|ref|ZP_00959114.1| HemY domain protein [Roseovarius nubinhibens ISM] gi|83838280|gb|EAP77576.1| HemY domain protein [Roseovarius nubinhibens ISM] Length = 525 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 104/493 (21%), Positives = 193/493 (39%), Gaps = 15/493 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVIL-------SILYFFLFA 54 ++++ + +I + + + V I +P + +L+ L Sbjct: 6 IKIVVFLGLILAASFAAMHLLSLEGGVRIVMAGYEVNLTPLNAIITLALLLLMLWLLLKL 65 Query: 55 WILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114 LL A+ RF + + +KGY+AL G+M++A+ LA M + Sbjct: 66 GALLVALLRFINGDETAMSRYFDRNRQEKGYRALTEGMMALASGEGKLA--MSRAARAEK 123 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 H L LL Q A A E + +L+ TR V L + GD ++A Sbjct: 124 YLHKPELTNLLTAQAAELTGDRRTAEEVYKRLLKDDKTRFVGVRGLLKQKIEEGDTDTAL 183 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLI 230 + A A + P V + ++Q +W A LN K K+ R AIL + Sbjct: 184 KLAETAFGLKPTHEEVQDTLLQLQAGQADWKGARATLNAKLKHGSLPRDLHRRRDAILAL 243 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A + + A + I + AIE+ +L + + A++ AA++ I KR A ++ K W+ Sbjct: 244 AEARDIAAENSTIEAKETAIEANRLSPHLVPAAVMAAQAYIEDGSKRYATRVIRKAWESQ 303 Query: 291 PHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP++A Y + + T +LKR +L +++ + E+ ++ +++ + A Sbjct: 304 PHPDLAAAYAAIEPDETPDQRLKRFAKLFKLSPDHPEAKLVEAELQIAAEDFPAARRALG 363 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPL 408 + AP ++A IE+ N + W A+ A P WI ++ ++ W P Sbjct: 364 TLAETAPDARSLTIMAAIERGAGANDTVVKGWLARAVAAARGPQWICENCQHIHHEWAPT 423 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 + EW+ + + + L + + QS + + SS Sbjct: 424 CAHCHAVDTLEWRNAPGAAPAMPTGVAMLPLIVGALEEPAQSPKAEPEAESPETDAATSS 483 Query: 469 FEDSTIHPLDPHI 481 +D I Sbjct: 484 GTAPEADIVDAEI 496 >gi|307942605|ref|ZP_07657953.1| HemY domain-containing protein [Roseibium sp. TrichSKD4] gi|307774244|gb|EFO33457.1| HemY domain-containing protein [Roseibium sp. TrichSKD4] Length = 656 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 122/489 (24%), Positives = 228/489 (46%), Gaps = 15/489 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ +F ++ V ++ P VSI+W ++ P V+ +L L A++ + Sbjct: 1 MIRVLVFFALLFAVALGAARMADLPGVVSISWDGYVWEQPPVVVAVVLASLLAAFLFVVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R L+ P + +R DKGY++L GL+++ N LAR+ + F +E Sbjct: 61 VIRVILNSPKIATRFFRQRRKDKGYQSLSQGLIALGTGNAKLARR--HALDADKFFSDEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q A + A ++ E ML P TR ++ L+ E+ + G+ +A+ YA +A Sbjct: 119 ATKLLLAQTAQLAGKDEEARKRFEDMLADPQTRSLGLHGLFIEAEKQGEPAAARHYAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236 + P W AV+ +A +W +A+ L + K + K + R RA++L A + + Sbjct: 179 VKAVPGLEWAGNAVLGYQAVASDWEQALQSLERNYSAKLLDKKSYRRQRAVILTAHARQL 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D+ D ++ +A E+ L N + A+ AA+ + RKA +LE W++ PHPE+A Sbjct: 239 EDQ-DPDKAFANAKEAHGLAQNLVPAATIAARLATRRGDIRKASKMLETTWRLAPHPELA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H+ ++ + +LKR L + + +++ A+E D+A + ++ Sbjct: 298 DAYAHVRSGDSAIDRLKRVKALAGQRTNTAVGALAIARAAMEAREFDEAREQMKKVLRSE 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + F+++A++E+ N ++ W A++A D WI+ DG + + W +SP++ L Sbjct: 358 PTRGAFMMMAEVEELEHGNRGRMREWLAKAVNAPLDKAWIA-DGVVQAEWAAVSPVTGQL 416 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475 FEW P + E +E + I V E++ + Sbjct: 417 DAFEWATP------NNVERETQVIEDSLFEAPQIMAQPAPTAELGDDIVDVDPAENAKVV 470 Query: 476 PLDPHIRQP 484 ++P Sbjct: 471 NPPQEPKEP 479 >gi|227823721|ref|YP_002827694.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium fredii NGR234] gi|227342723|gb|ACP26941.1| hypthetical protein contains N-terminal HemY domain [Sinorhizobium fredii NGR234] Length = 541 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 164/529 (31%), Positives = 259/529 (48%), Gaps = 40/529 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + ++ + F ++ P ++S+ W +L S +IL A +++ Sbjct: 1 MVRILFFILLVLALALGFAWLADRPGELSLIWQGQLIEMSLMRAATILISLFAAILIVAW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + R D+GY+AL TGL++ A + LARKM + E Sbjct: 61 LIRTLWLSPHTVTRYFRARKRDRGYQALSTGLIAAGAGDAALARKMAGRTRGLISADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q AL E +Y+ A +K E+M P TRE + LY E+ R+G +A++YA +A Sbjct: 121 LIHLLEAQTALIEGKYDDARKKFELMADDPETRELGLRGLYLEAKRLGANEAARQYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 + +P W T A + Q A +W AI L+Q + + KE NR +A+LL AR+ Sbjct: 181 AEKAPHLSWATLATLDQRSQAGQWDEAIRLLDQSRTANVLDKKEANRKKAVLLTARATGK 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D A+ DA+ +LKL D + A++ AAK+L ++ RK +LEK+WK +PHPE+A Sbjct: 241 LE-ADPKAARDDALAALKLDDRLVPAALTAAKALFREDNLRKGASVLEKVWKQDPHPELA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y ++ V +LKRA RLE + + SL V++ ALE + A +KA A ++A Sbjct: 300 RLYVRARGGDSAVDRLKRAKRLETLRGNNAVSLATVAEAALEARELALARSKAEAAARLA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + IFLL+A IE+A++ + +I +W AL + DP W + DG S WLP+SP+S L Sbjct: 360 PSESIFLLIADIEEADTGDEGRIRHWMAQALRSPRDPAWTA-DGVTSPTWLPVSPVSGRL 418 Query: 416 CYFEWKIPT---------------------------------KSPEYISSENINFSLEMA 442 FEWK P ++P +E LE Sbjct: 419 DAFEWKEPPSPLAGTTEEGRVSVDEAIRSLPPVAPEHPVAVREAPATPKAEENGPVLEAE 478 Query: 443 YPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491 P ++ +K K R PDDPG+++ Sbjct: 479 RPIPTPTAITVPERKETAAPPSKSEGTAAEDEEAAPFFGRPPDDPGVRD 527 >gi|240137308|ref|YP_002961777.1| hypothetical protein MexAM1_META1p0562 [Methylobacterium extorquens AM1] gi|240007274|gb|ACS38500.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens AM1] Length = 511 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 114/492 (23%), Positives = 216/492 (43%), Gaps = 12/492 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + AR+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 ++P W EAV++ EWS A + ++ + R RA+LL A + + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ ++ A++++KL + + A++ A + L +N RKA I+E WK PHPE+A Sbjct: 238 HEAGEPDSATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y +L ++ +L RA L +++ ES +++++ A E +A Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357 Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + ++A+IE A + + W A A DP W++ DG +S W P+SP+S Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416 Query: 415 LCYFEWKIPTKSPEYISSENINFS--LEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 L F WK P + ++ E A P + + P+ + Sbjct: 417 LDAFVWKTPPEILAGPEDDDAPVPASAEPAAPVAIPTTPVPAPVTTDSPAPSTPGFLQTG 476 Query: 473 TIHPLDPHIRQP 484 P P P Sbjct: 477 AGTPSVPPTPAP 488 >gi|163850175|ref|YP_001638218.1| HemY domain-containing protein [Methylobacterium extorquens PA1] gi|163661780|gb|ABY29147.1| HemY domain protein [Methylobacterium extorquens PA1] Length = 511 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 118/496 (23%), Positives = 218/496 (43%), Gaps = 16/496 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + AR+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 ++P W EAV++ EWS A + ++ + R RA+LL A + + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE+A Sbjct: 238 HEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y +L ++ +L RA L +++ ES +++++ A E +A Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357 Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + ++A+IE A + + W A A DP W++ DG +S W P+SP+S Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474 L F WK P PE ++ + S A + +P+ S ST Sbjct: 417 LDAFVWKTP---PEILAGPEDDDSPAPASAEPAAPVAIPTT---PVPAPVTTDSPAPSTP 470 Query: 475 HPLDPHIRQPDDPGIK 490 L P P Sbjct: 471 GFLQTGAGTPSVPSTP 486 >gi|218528780|ref|YP_002419596.1| HemY domain protein [Methylobacterium chloromethanicum CM4] gi|218521083|gb|ACK81668.1| HemY domain protein [Methylobacterium chloromethanicum CM4] Length = 511 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 113/492 (22%), Positives = 215/492 (43%), Gaps = 12/492 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + AR+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 ++P W EAV++ EWS A + ++ + R RA+LL A + + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE+A Sbjct: 238 HEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y +L ++ +L RA L +++ ES +++++ A E +A Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357 Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + ++A+IE A + + W A A DP W++ DG +S W P+SP+S Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416 Query: 415 LCYFEWKIPTKSPEYISSENINFS--LEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 L F WK P + ++ E + P + + P+ + Sbjct: 417 LDAFVWKTPPEILAGPEDDDAPVPASAEPSAPVAIPTTPVPARVTTDSPAPSTPGFLQTG 476 Query: 473 TIHPLDPHIRQP 484 P P P Sbjct: 477 AGTPSVPPTPAP 488 >gi|17986463|ref|NP_539097.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M] gi|265991915|ref|ZP_06104472.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993646|ref|ZP_06106203.1| HemY domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|265999298|ref|ZP_05465724.2| HemY domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|17982061|gb|AAL51361.1| hypothetical protein BMEI0179 [Brucella melitensis bv. 1 str. 16M] gi|262764627|gb|EEZ10548.1| HemY domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|263002981|gb|EEZ15274.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. Rev.1] gi|263093114|gb|EEZ17249.1| HemY domain-containing protein [Brucella melitensis bv. 2 str. 63/9] Length = 525 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 136/512 (26%), Positives = 237/512 (46%), Gaps = 22/512 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480 Query: 473 TIHPLDPHIRQ------------PDDPGIKEQ 492 I P + DDPGI + Sbjct: 481 VIVPAAEPVSADEPVKAGPAHIVVDDPGIDDD 512 >gi|225853321|ref|YP_002733554.1| HemY domain-containing protein [Brucella melitensis ATCC 23457] gi|256045493|ref|ZP_05448376.1| hypothetical protein Bmelb1R_13396 [Brucella melitensis bv. 1 str. Rev.1] gi|256112219|ref|ZP_05453140.1| hypothetical protein Bmelb3E_05957 [Brucella melitensis bv. 3 str. Ether] gi|260562802|ref|ZP_05833288.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|225641686|gb|ACO01600.1| HemY domain protein [Brucella melitensis ATCC 23457] gi|260152818|gb|EEW87910.1| HemY domain-containing protein [Brucella melitensis bv. 1 str. 16M] gi|326409884|gb|ADZ66949.1| conserved hypothetical protein [Brucella melitensis M28] gi|326539598|gb|ADZ87813.1| HemY domain protein [Brucella melitensis M5-90] Length = 523 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 136/512 (26%), Positives = 237/512 (46%), Gaps = 22/512 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478 Query: 473 TIHPLDPHIRQ------------PDDPGIKEQ 492 I P + DDPGI + Sbjct: 479 VIVPAAEPVSADEPVKAGPAHIVVDDPGIDDD 510 >gi|254559413|ref|YP_003066508.1| hypothetical protein METDI0838 [Methylobacterium extorquens DM4] gi|254266691|emb|CAX22471.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens DM4] Length = 511 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 112/492 (22%), Positives = 213/492 (43%), Gaps = 12/492 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWSGYEIGMSLAIALTGVLVAAIVLGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + PA + +R +KG +L G++++ + + AR+ + ++ Sbjct: 61 VVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA++A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYASEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 ++P W EAV++ EWS A + ++ + R RA+LL A + + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE+A Sbjct: 238 HEAGEPDTATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y +L ++ +L RA L +++ ES +++++ A E +A Sbjct: 298 KVYLNLRTGDSARDRLARAENLAKLSSWEPESRLVIAQAATEAKDFGRAREALAPLTDDR 357 Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + ++A+IE A + + W A A DP W++ DG +S W P+SP+S Sbjct: 358 PTARVCRMMARIEAAEHGAESGRSREWLARAARAPRDPAWVA-DGIISERWAPVSPVSGR 416 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADD--LQSMLNNGKKNHLPSIKKVSSFEDS 472 L F WK P + ++ A + + P+ + Sbjct: 417 LDAFVWKTPPEILAGPEDDDAPAPASAEPAAPVAIPTTPVPAPVTTDSPAPSTPGFLQTG 476 Query: 473 TIHPLDPHIRQP 484 P P P Sbjct: 477 AGTPSVPPTPAP 488 >gi|261755593|ref|ZP_05999302.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686] gi|261745346|gb|EEY33272.1| HemY domain-containing protein [Brucella suis bv. 3 str. 686] Length = 525 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 243 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 481 VIVPAAEPVSA-DEP 494 >gi|260567627|ref|ZP_05838097.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40] gi|260157145|gb|EEW92225.1| HemY domain-containing protein [Brucella suis bv. 4 str. 40] Length = 523 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 134/495 (27%), Positives = 235/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M +Q + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|188579976|ref|YP_001923421.1| HemY domain protein [Methylobacterium populi BJ001] gi|179343474|gb|ACB78886.1| HemY domain protein [Methylobacterium populi BJ001] Length = 511 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 109/485 (22%), Positives = 215/485 (44%), Gaps = 21/485 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W TS + L+ + L++A Sbjct: 1 MWRALVFLALLAVAAYGAVWIADHPGTVTVVWNGYEIGTSLAIALTGVLVAAIILGLIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + PA + +R +KG +L G++++ + + AR+ + ++ Sbjct: 61 IVTGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + + M P TR + L+ E+ R D +A+ YA +A Sbjct: 119 LTLLLKAQAAQISGDRDAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYAAEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 ++P W EAV++ EWS A + ++ + R RA+LL A + + Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRAALGLMDKHAARRQRAVLLTA-AAQR 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + A++++KL + + A++ A + L +N RKA I+E WK PHPE+ Sbjct: 238 HEAGEPETATEQALKAVKLAPDLVPAAVIAGRLLARRNDLRKAAKIIEAAWKATPHPELG 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y +L ++ +L RA L +++ ES +++++ A E +A + Sbjct: 298 KVYLNLRTGDSARDRLARAETLAKLSSWDPESRLVIAQAASESKDFARAREVLAPLVDDR 357 Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + ++A+IE A ++ + W A A DP W++ DG +S W P+SP++ Sbjct: 358 PTSRVCRMMARIEAAEHGADSGRSREWLARAARAPRDPAWVA-DGVVSERWAPVSPVTGR 416 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474 L F WK P + E+ + + + +P+ + + Sbjct: 417 LDAFVWKTPPEI--LAGPEDDDAPVPASP---------EPTAPAAIPASSGPAPITTDSP 465 Query: 475 HPLDP 479 P P Sbjct: 466 APSTP 470 >gi|23502736|ref|NP_698863.1| hypothetical protein BR1884 [Brucella suis 1330] gi|254704899|ref|ZP_05166727.1| hypothetical protein Bsuib36_13470 [Brucella suis bv. 3 str. 686] gi|23348752|gb|AAN30778.1| conserved hypothetical protein [Brucella suis 1330] Length = 523 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|91974947|ref|YP_567606.1| HemY-like [Rhodopseudomonas palustris BisB5] gi|91681403|gb|ABE37705.1| HemY-like [Rhodopseudomonas palustris BisB5] Length = 588 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 121/502 (24%), Positives = 220/502 (43%), Gaps = 21/502 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR+I + +I+L V+ P DV ++W + V + L + + +L +A Sbjct: 1 MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNDWRAEMRLPVFVLGLGAAIVSIVLAWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P+ + +R + A+ GL+++ + AR S + ++ Sbjct: 61 IITGLWRAPSRMKRGRFERRSGRARHAITQGLLAVGHGDAAAARNHASAARRHA--PHDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A E + A M T+ + LY E+ R D A A +A Sbjct: 119 LALLLQAQSAQLEGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRADDPYGALAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L + P++ W ++AV+ +WS A+ L + K + R RA+LL AR+++ Sbjct: 179 LRLQPNSTWASQAVLGFRCARADWSGALDILETNLSSGLVDKKVFRRQRAVLLTARAIDL 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D + A+E+ KL I A++ AAK L ++ R+A ++E W+ PHP++A Sbjct: 239 ED-SDESLARDSALEANKLAPTLIPAAVLAAKCLAETHQVRRAMKVIEAAWQAQPHPDLA 297 Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y ++ + +L R L N ES + +++ ++ G +A Sbjct: 298 AAYANIKPGDPANIRLARVQNLIAKNPADFESALAIARAGIDAGEFSRARRALQ-PFIDN 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE +T K WT A+ A+PD +W + DGY S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDAMWTA-DGYTSDHWRPVSPVTGRL 415 Query: 416 CYFEWKIPTKSPEYISS----------ENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 F+W++P + + I S A PA + + ++ + + Sbjct: 416 DAFQWQVPIAALPARKAVVIEDNPFHDALIASSATEALPAANAHDPVTVTIESVVETTVV 475 Query: 466 VSSFEDSTIHPLDPHIRQPDDP 487 ++T+ ++P D P Sbjct: 476 APKQAEATVVTVEPEAAA-DKP 496 >gi|237816247|ref|ZP_04595240.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260755565|ref|ZP_05867913.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260758788|ref|ZP_05871136.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260760512|ref|ZP_05872855.1| HemY domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884589|ref|ZP_05896203.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68] gi|261214836|ref|ZP_05929117.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261323831|ref|ZP_05963028.1| HemY domain-containing protein [Brucella neotomae 5K33] gi|261751032|ref|ZP_05994741.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513] gi|237788314|gb|EEP62529.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260669106|gb|EEX56046.1| HemY domain-containing protein [Brucella abortus bv. 4 str. 292] gi|260670944|gb|EEX57765.1| HemY domain-containing protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675673|gb|EEX62494.1| HemY domain-containing protein [Brucella abortus bv. 6 str. 870] gi|260874117|gb|EEX81186.1| HemY domain-containing protein [Brucella abortus bv. 9 str. C68] gi|260916443|gb|EEX83304.1| HemY domain-containing protein [Brucella abortus bv. 3 str. Tulya] gi|261299811|gb|EEY03308.1| HemY domain-containing protein [Brucella neotomae 5K33] gi|261740785|gb|EEY28711.1| HemY domain-containing protein [Brucella suis bv. 5 str. 513] Length = 525 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 481 VIVPAAEPVSA-DEP 494 >gi|306842962|ref|ZP_07475596.1| HemY domain protein [Brucella sp. BO2] gi|306286890|gb|EFM58415.1| HemY domain protein [Brucella sp. BO2] Length = 523 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 232/495 (46%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHAHARAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 ATYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEIKAVAPISAPELEPVHETAAPVSARDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|225628086|ref|ZP_03786121.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261217713|ref|ZP_05931994.1| HemY domain-containing protein [Brucella ceti M13/05/1] gi|261220938|ref|ZP_05935219.1| HemY domain-containing protein [Brucella ceti B1/94] gi|261315072|ref|ZP_05954269.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261316370|ref|ZP_05955567.1| HemY domain-containing protein [Brucella pinnipedialis B2/94] gi|261321440|ref|ZP_05960637.1| HemY domain-containing protein [Brucella ceti M644/93/1] gi|261758825|ref|ZP_06002534.1| HemY domain-containing protein [Brucella sp. F5/99] gi|265987442|ref|ZP_06099999.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1] gi|265996898|ref|ZP_06109455.1| HemY domain-containing protein [Brucella ceti M490/95/1] gi|225616911|gb|EEH13958.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|260919522|gb|EEX86175.1| HemY domain-containing protein [Brucella ceti B1/94] gi|260922802|gb|EEX89370.1| HemY domain-containing protein [Brucella ceti M13/05/1] gi|261294130|gb|EEX97626.1| HemY domain-containing protein [Brucella ceti M644/93/1] gi|261295593|gb|EEX99089.1| HemY domain-containing protein [Brucella pinnipedialis B2/94] gi|261304098|gb|EEY07595.1| HemY domain-containing protein [Brucella pinnipedialis M163/99/10] gi|261738809|gb|EEY26805.1| HemY domain-containing protein [Brucella sp. F5/99] gi|262551366|gb|EEZ07356.1| HemY domain-containing protein [Brucella ceti M490/95/1] gi|264659639|gb|EEZ29900.1| HemY domain-containing protein [Brucella pinnipedialis M292/94/1] Length = 525 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFPHPDIA 301 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 302 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 421 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 480 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 481 VIVPAAEPVSA-DEP 494 >gi|306844854|ref|ZP_07477437.1| HemY domain protein [Brucella sp. BO1] gi|306274786|gb|EFM56567.1| HemY domain protein [Brucella sp. BO1] Length = 523 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 132/495 (26%), Positives = 232/495 (46%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLIQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S + +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDAAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEIKAVAPISAPEMEPVHETAAPVGAPDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|62290741|ref|YP_222534.1| hypothetical protein BruAb1_1861 [Brucella abortus bv. 1 str. 9-941] gi|82700652|ref|YP_415226.1| hypothetical protein BAB1_1884 [Brucella melitensis biovar Abortus 2308] gi|148559352|ref|YP_001259709.1| hypothetical protein BOV_1812 [Brucella ovis ATCC 25840] gi|163843908|ref|YP_001628312.1| HemY domain-containing protein [Brucella suis ATCC 23445] gi|189024954|ref|YP_001935722.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19] gi|254690029|ref|ZP_05153283.1| hypothetical protein Babob68_07641 [Brucella abortus bv. 6 str. 870] gi|254694518|ref|ZP_05156346.1| hypothetical protein Babob3T_07639 [Brucella abortus bv. 3 str. Tulya] gi|254696143|ref|ZP_05157971.1| hypothetical protein Babob28_00127 [Brucella abortus bv. 2 str. 86/8/59] gi|254700528|ref|ZP_05162356.1| hypothetical protein Bsuib55_06701 [Brucella suis bv. 5 str. 513] gi|254731061|ref|ZP_05189639.1| hypothetical protein Babob42_07671 [Brucella abortus bv. 4 str. 292] gi|256059861|ref|ZP_05450048.1| hypothetical protein Bneo5_05852 [Brucella neotomae 5K33] gi|256258283|ref|ZP_05463819.1| hypothetical protein Babob9C_13253 [Brucella abortus bv. 9 str. C68] gi|260546004|ref|ZP_05821744.1| HemY domain-containing protein [Brucella abortus NCTC 8038] gi|297247127|ref|ZP_06930845.1| HemY protein [Brucella abortus bv. 5 str. B3196] gi|62196873|gb|AAX75173.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82616753|emb|CAJ11840.1| unnamed protein product [Brucella melitensis biovar Abortus 2308] gi|148370609|gb|ABQ60588.1| conserved hypothetical protein [Brucella ovis ATCC 25840] gi|163674631|gb|ABY38742.1| HemY domain protein [Brucella suis ATCC 23445] gi|189020526|gb|ACD73248.1| hypothetical protein BAbS19_I17660 [Brucella abortus S19] gi|260096111|gb|EEW79987.1| HemY domain-containing protein [Brucella abortus NCTC 8038] gi|297174296|gb|EFH33643.1| HemY protein [Brucella abortus bv. 5 str. B3196] Length = 523 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|254707585|ref|ZP_05169413.1| hypothetical protein BpinM_11596 [Brucella pinnipedialis M163/99/10] gi|254708877|ref|ZP_05170688.1| hypothetical protein BpinB_01173 [Brucella pinnipedialis B2/94] gi|254713700|ref|ZP_05175511.1| hypothetical protein BcetM6_10155 [Brucella ceti M644/93/1] gi|254715950|ref|ZP_05177761.1| hypothetical protein BcetM_05867 [Brucella ceti M13/05/1] gi|256030403|ref|ZP_05444017.1| hypothetical protein BpinM2_07105 [Brucella pinnipedialis M292/94/1] gi|256158386|ref|ZP_05456284.1| hypothetical protein BcetM4_05995 [Brucella ceti M490/95/1] gi|256253805|ref|ZP_05459341.1| hypothetical protein BcetB_05837 [Brucella ceti B1/94] gi|260169312|ref|ZP_05756123.1| hypothetical protein BruF5_13330 [Brucella sp. F5/99] Length = 523 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEMRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|161619801|ref|YP_001593688.1| HemY domain-containing protein [Brucella canis ATCC 23365] gi|161336612|gb|ABX62917.1| HemY domain protein [Brucella canis ATCC 23365] Length = 523 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 134/495 (27%), Positives = 236/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M +Q + + E Sbjct: 61 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKQLSSYQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHTHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|256370285|ref|YP_003107796.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915] gi|256000448|gb|ACU48847.1| hypothetical protein BMI_I1905 [Brucella microti CCM 4915] Length = 523 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 134/495 (27%), Positives = 235/495 (47%), Gaps = 11/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 1 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P ML L R D+GY++L TGL++ A + AR+M + + E Sbjct: 61 LVKSLVQSPYMLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 121 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 181 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 241 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 300 STYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 360 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 418 Query: 416 CYFEWKIPT---KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 FEWK+P + I L + + + + E Sbjct: 419 NSFEWKVPVVELAPAIEVEKPEIKAPLPEVKAVAPISAPELEPVRETAAPVGARDVVEAE 478 Query: 473 TIHPLDPHIRQPDDP 487 I P + D+P Sbjct: 479 VIVPAAEPVSA-DEP 492 >gi|146337456|ref|YP_001202504.1| putative signal peptide;putative HemY porphyrin biosynthesis protein [Bradyrhizobium sp. ORS278] gi|146190262|emb|CAL74256.1| conserved hypothetical protein; putative signal peptide;putative HemY porphyrin biosynthesis protein [Bradyrhizobium sp. ORS278] Length = 644 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 111/474 (23%), Positives = 202/474 (42%), Gaps = 10/474 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + ++ L V+ DV + WG + V + L + A +L++ Sbjct: 1 MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLALGLTIAACVLVWN 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L P + +R + +G A+ GL++I + AR+ ++ Sbjct: 61 LLSALLRAPNRIRKAHRERRHRRGRHAITHGLLAIGHGDSTAARQHADMAK--RLAGDDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A E + A M + TR + L+ E+ R D +A A +A Sbjct: 119 LTLLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFIEAQRADDAMAAVVIADEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236 L ++P+A W + AV+ +W+ A++ L+ + + R R +LL AR++ Sbjct: 179 LKLAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMA- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + A+E++KL + A++ AAK ++ R+A I+E W PHP++A Sbjct: 238 LETENRDLARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCPHPDLA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H+ ++ V +L R L VE + V++ A++ +A A Sbjct: 298 DAYAHVRLGDSAVQRLSRITNLAARTPNHVEGALAVARAAIDAAEFGRARAAL-APFTED 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A++E+ + K WT A+ A DP W + DGY+S W P+SP++ L Sbjct: 357 PTQRVAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTA-DGYVSDRWRPISPVTGRL 415 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469 F+W+ P S + I S P + Sbjct: 416 DAFQWQTPVASLPSERNSVIESSEFAEAILAPPSRPAIPEGLVEPPRTVPAAPV 469 >gi|300024948|ref|YP_003757559.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526769|gb|ADJ25238.1| HemY domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 577 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 121/492 (24%), Positives = 226/492 (45%), Gaps = 13/492 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ Y I+L+ ++ P + I W TS F + +L + + + L++ Sbjct: 1 MVRLVVYLVTIALIASGLAWLADRPGTLQIAWQGYDIETSVFRAVVLLAAAVASIVFLWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R + PA + L +R KG A+ +GL++I A + LA + + + + +E Sbjct: 61 VFRALWNSPAAIGGRLVQRRQRKGLDAVSSGLIAIGAGDSTLASRF--ALQARKSLPHEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L +LL Q A A E ML P T + L+ E+ G +A+++A +A Sbjct: 119 LTHLLRAQSAELSGDRATARRIYEAMLASPETELLGLRGLFLEAQHQGADEAARQFADRA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L +P W A+ +Q K+W+ A+ L +KN + +R RA+LL A++ +N Sbjct: 179 LKANPKLGWSATALFEQQCKQKDWTGALETLQHARKNGHIAKADADRKRAVLLTAKA-QN 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ + A+E+ L + + A+ A + L S+ KA +L+K W +PHP++A Sbjct: 238 VEEDSPDRALTLAMEAHALAPDLVPAAAIAGRILASRGNTAKAAKVLQKTWAKSPHPDLA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + ++T + R +L +N S+ES + V+ A+E D+A + Sbjct: 298 SAYAYARVGDSTRDRFDRERQLAALNPHSIESPIAVATAAIEARMYDEARRVLEPLLPER 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 + + L+A+IE ++ + ++ W A++A DP WI+ DG +S W P SP+ L Sbjct: 358 LTQRVATLMARIEAGDNGDKGRVREWLARAMNAARDPAWIA-DGVISDHWEPTSPVDGRL 416 Query: 416 CYFEWKIPTKSPEYISSENINFSLE----MAYPADDLQSMLNNGKKNHLPSIKKVSSFED 471 F+W++P ++ + +E + +E + P ++ + Sbjct: 417 DAFQWRVPVETRDATRNEILARRIEELIAIEAPTVAPEAPSREAATEAGADVIDAEPVTV 476 Query: 472 STIHPLDPHIRQ 483 + P R Sbjct: 477 TAKPAPLPEERA 488 >gi|13473574|ref|NP_105142.1| hypothetical protein mll4218 [Mesorhizobium loti MAFF303099] gi|14024324|dbj|BAB50928.1| mll4218 [Mesorhizobium loti MAFF303099] Length = 531 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 147/520 (28%), Positives = 247/520 (47%), Gaps = 30/520 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + V+ + F ++ P D+ +T+ Y+ S V + + A ++L+ Sbjct: 1 MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAIVAVVAAVMILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P + R D+GY+AL TG+++ A + LARK ++ E Sbjct: 61 LIRSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E + A +K E ML P R + LY E+ R+GD N+A+ YA +A Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 ++P W E+ +++ +W A+ ++ + + NR RA+LL A++ Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D A+ A+E+ KL + A++ AA +L QN RK ILE W+ PHPEIA Sbjct: 241 AD-SDPNAARTAALEANKLQPDFAPAAVAAAAALFKQNDVRKGSKILETAWRAEPHPEIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +YTH + V +L RA +L+E+ K ES + V++ AL+ A ++A A+++ Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFSTARSEAEAAIRMD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ +LLLA IE+A + + K+ A+ A DP W++ DG +S W P+SP++ L Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418 Query: 416 CYFEWKIPTKS-----PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470 FEW+ P + + +A PA + + K + Sbjct: 419 DAFEWRAPMERLGQLIDSRDEGTTVPVIEALAKPASEKPIDAIEPVAAGSETTGKGTDRS 478 Query: 471 DS------------------TIHPLDPHIRQPDDPGIKEQ 492 + + P + R PDDPG+ Sbjct: 479 EDQVTPVTAAAFAAVPADAEAVEPAEELTRLPDDPGVDPD 518 >gi|89056574|ref|YP_512025.1| HemY-like [Jannaschia sp. CCS1] gi|88866123|gb|ABD57000.1| HemY-like protein [Jannaschia sp. CCS1] Length = 509 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 96/498 (19%), Positives = 186/498 (37%), Gaps = 17/498 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWIL-- 57 +L++I + ++ + +++ + I +G T ++ + L WIL Sbjct: 6 LLKIIIFIAIVVGAVFGITLLTEMDNLGILIIFGREFVITPLLAVIGAVILLLAVWILFK 65 Query: 58 ----LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 L A R L +R+ KGY AL +M++AA LA + + Sbjct: 66 VVGLLVAFLRMLNGDETALTRYWSRRSERKGYDALGDAMMALAAGEGRLAIR--KAERAR 123 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L L+ Q A +A E + M+ TR V L + GD ++A Sbjct: 124 KALGRPELTNLVVAQGAEMVGDKALATETYKAMVTDDRTRFVGVRGLMQQRLDDGDTDTA 183 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A KAL + P V ++ ++W A L K R A+L Sbjct: 184 LKLAEKALVLRPKNADVQTTLISLQSRQEDWQGARGTLAAALKAGNVPRDLHRRRDAVLA 243 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +A + + +G ++ + D E+ +L + A++ + + + KR+A + K W Sbjct: 244 LAHARDAMAEGQVVTATRDVAEANRLAPGLVPAAVMSTRLAVEAGNKRQAAKTIRKAWDQ 303 Query: 290 NPHPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + + + T +L+R L + E ++ +++ + A Sbjct: 304 APHPDLAAAFALIEPDETPALRLRRFRPLLGKHPTHPEVKMLEAELHIANEDFPAARKAL 363 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 + AP ++A +E+ + W A+ A W+ D+ G++ W P Sbjct: 364 GDLAESAPTARSLTIMAAVERGEGSPDRIVRGWLARAVTAPRGNQWLCDNCGHVHEDWTP 423 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + ++ +W P +S ++ L + D QS P ++ + Sbjct: 424 VCVNCESFDTLDWAEPRQSETSLAGPTQMLPLIVGALED--QSDAPEAAPEAGPDAEEEA 481 Query: 468 SFEDSTIHPLDPHIRQPD 485 D T + PD Sbjct: 482 EILDDTPAEPEAAQVTPD 499 >gi|90421577|ref|YP_529947.1| HemY-like [Rhodopseudomonas palustris BisB18] gi|90103591|gb|ABD85628.1| HemY-like [Rhodopseudomonas palustris BisB18] Length = 561 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 127/536 (23%), Positives = 228/536 (42%), Gaps = 49/536 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR+I + VI+ ++ P +V ++W + V L + A L + Sbjct: 1 MLRIILFLVVIAAAAAGAGWLAEQPGNVVLSWRGWQAEMTLAVAALALLSAIVAVALGWT 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L P L R + +A+ GL+++ + +AR + + + Sbjct: 61 ILAGVLRSPGRLRRSRRARREARARRAITQGLLAVGHGDAAIARAHANAAKRHA--PQDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + + A M T+ + L+ E+ R D +A A +A Sbjct: 119 LALLLQAQSAQLDGDRDGAKRAFLAMAGRDDTKSLGMRGLFIEAQRAEDPYAALTIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 L +SP + W ++AV+ +WS A+ L + K + R R +LL AR++E Sbjct: 179 LRLSPASSWASQAVLGFRCARGDWSGALEILETNLTSGLIDKKTYRRLRGVLLTARAIEC 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ D+ S A+E++KL + A++ A+K L ++ R+A +E W +PHP++A Sbjct: 239 -EETDVSLSRDSALEAVKLAPTLVPAAVLASKYLSEAHQIRRAMKTIETAWLAHPHPDLA 297 Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y H+ ++ +L+R L E V V++ A++ G ++A M A Sbjct: 298 EAYAHIKPGDSAQVRLQRVEALAAKASGDTEGAVAVARAAIDAGDFNRARGALM-PFVDA 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE ++ WT A+ A+ DP+W + DG +S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHTERKDSRSARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPVTGRL 415 Query: 416 CYFEWKIPT--------------------------KSPEYISSENINFSLEMAYP----- 444 F+W P + E ++SE + A P Sbjct: 416 DAFQWTTPLAELPTNKAVVLESDLFDETLIESPTEEVTEGVTSEPATPEVSKAEPSKPET 475 Query: 445 -ADDLQSMLNNGKKNHLPSIKKVSS-------FEDSTIHPLDPHIRQPDDPGIKEQ 492 ++ ++ + P + S + S P+ P +R PDDPGI E Sbjct: 476 SGTPVEVVMESKPAAEAPVVGPTESSPPLFHRPQRSAAAPVIPIVRAPDDPGIDED 531 >gi|114705598|ref|ZP_01438501.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506] gi|114538444|gb|EAU41565.1| hypothetical protein FP2506_14069 [Fulvimarina pelagi HTCC2506] Length = 522 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 130/488 (26%), Positives = 230/488 (47%), Gaps = 11/488 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ +F +I + F ++ P V+ W + S + L+ + A +L+ Sbjct: 1 MWGILTFFILILALYLGFGWLADNPGSVTFVWQEQTVEFSMILFLAAAAAVIVASVLVVW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P ++ R + KG+ L G+++ A N LAR+M + + Sbjct: 61 LVAKLFQAPGLISSWNSSRRHSKGHNYLSRGVLAAGAGNATLARQMIKKSEGRIGKDDRA 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 ++ L+ Q AL E + A M + P T+ A+ LY E+ R+GD ++ + YA +A Sbjct: 121 ILGFLDAQTALIEGDHQRAVAIFRDMEEDPNTKLLALRGLYLEAKRVGDESAQEYYAERA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 L I+P+ PW EAV+++ +++W A+ L ++ K+ R RAILL A++ + Sbjct: 181 LRIAPNLPWAAEAVLERKSSSRDWDGALRVLEAQRSIDMLGDKDAKRIRAILLTAKAKDQ 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D A+ A + K+ + + A++ AA + N R+A LE W PHPEIA Sbjct: 241 AD-ADPKAARSSARSAQKIAPDFVPAALVAAAAATRLNDSRRATRYLETTWVNAPHPEIA 299 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H ++ +L+RA +L+ + ++ ES + V++ AL+ G D A + A+ A + Sbjct: 300 DAYVHAKAGDSAKDRLRRAQKLKGLYEKHPESDIAVARAALDAGEHDLARSSALDAAQKR 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + ++LLLA IE+ S ++ W A+ A DP+W++ DG + W P+SP+++ L Sbjct: 360 PTESVYLLLADIEEEQSGEVGRVREWLAKAITAPRDPVWMA-DGVILDEWQPVSPVTRKL 418 Query: 416 CYFEWKIPTKSPEYISSENINFSL----EMAYPADDLQSMLNNGKKNHLPSIKKVSSFED 471 EWK P + + + I E A + H PS + Sbjct: 419 GVVEWKSPVEHRDSNGNPVIEARARDHGESARIISSSDGSNASAASAHTPSTAMTTVASS 478 Query: 472 STIHPLDP 479 + P Sbjct: 479 TLNGNPRP 486 >gi|294851122|ref|ZP_06791795.1| HemY protein [Brucella sp. NVSL 07-0026] gi|294819711|gb|EFG36710.1| HemY protein [Brucella sp. NVSL 07-0026] Length = 480 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 126/429 (29%), Positives = 220/429 (51%), Gaps = 7/429 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++++ + Y S ++ + + A +LL+ Sbjct: 3 MLRVLFYLILVAALGFGFAWLADRPGELNLIFAGNQYNVSLITAVAGIVAIVAAVLLLWW 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L L R D+GY++L TGL++ A + AR+M + + E Sbjct: 63 LVKSLVQSPYTLRRHLRTRKRDRGYQSLSTGLIAAGAGDADAARRMTRQAGKLLSSDQEP 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M++ P TR + LY E+ R+G +A+ YA +A Sbjct: 123 LIRLLEAQTAMLEGRTEDARKGFEAMIEDPETRLLGLRGLYIEAQRVGAREAARHYAAEA 182 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q +W A+ ++ +++ + RA LL A+++ Sbjct: 183 ARQAPQLEWASSAVMGQLCAEGDWDGALKLVDARRQVLAHGKDVVKKERAALLTAKAMAT 242 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A+E+ KL + + A++ AA++L + + RK ILE WK PHP+IA Sbjct: 243 LD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIRKGSKILEAAWKRFPHPDIA 301 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ A Sbjct: 302 STYIYARSGDTAQDRLKRARHLVLLRSNNAEGSLALARAAYEAGEYSVARDNAEQVLRAA 361 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+ W P+SP++ L Sbjct: 362 PRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA-DGYVCEQWSPVSPVTGRL 420 Query: 416 CYFEWKIPT 424 FEWK+P Sbjct: 421 NSFEWKVPV 429 >gi|27375675|ref|NP_767204.1| hypothetical protein bll0564 [Bradyrhizobium japonicum USDA 110] gi|27348813|dbj|BAC45829.1| bll0564 [Bradyrhizobium japonicum USDA 110] Length = 580 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 121/498 (24%), Positives = 221/498 (44%), Gaps = 19/498 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + +I+L V+ P D+ +T G T+ + +L F A +L+++ Sbjct: 1 MLRIVLFLVLIALAAAGAAWVADQPGDLVLTAGGFRASTTLPRFVFLLGLFAAAVVLVWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P L H++ + +G A+ GL++I + LAR+ + + N+ Sbjct: 61 ILTTIWRTPGRLRRRSHEKRHARGRHAITHGLLAIGHGDTALARR--HAETARRHAPNDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A E + A M + TR + L+ E+ R D A A +A Sbjct: 119 LALLLHAQSAQLEGNRDEAQRAFRAMAEREDTRLLGLRGLFIEAQRADDAVGAVMIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236 + +SP + W + AV+ +WS A+ L+ + + R R +LL AR+LE Sbjct: 179 IKLSPSSTWASHAVLGFRCARGDWSGALAILDSNLSAGLIDKPAYRRQRGVLLTARALE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + +E++KL + A++ AAK ++ R+A ++E W NPHP++A Sbjct: 238 LQTMDRDVARESVMEAIKLAPTLVPAAVLAAKFESEAHQVRRAMKLVEAAWLANPHPDLA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLA 351 Y H+ ++ +L+R L +E + +++ A++ +A A Sbjct: 298 EAYAHVKLGDSARQRLQRVETLAAKTPADKAGHIEGQLALARAAIDASEFSRARAVLAPY 357 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 + P + + LL+A+IE+ + + WT A+ A DP W + DGY+S W P+SP+ Sbjct: 358 VN-DPTQRVALLMAEIERTEHGDGGRARAWTLRAVRARHDPAWTA-DGYVSDRWRPVSPV 415 Query: 412 SKTLCYFEWKIPTKSPE-----YISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466 + L F+W+ P S I S ++ A P + + N+ P+ Sbjct: 416 TGRLDAFQWQTPVASLPSDKGDLIESSAFEEAMLAAPPPKRVTAPANDTLMEPAPAASVP 475 Query: 467 SSFEDSTIHPLDPHIRQP 484 + ++S + +P Sbjct: 476 AEQDNSPPAAKEEPKEEP 493 >gi|239833008|ref|ZP_04681337.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239825275|gb|EEQ96843.1| HemY domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 480 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 120/412 (29%), Positives = 208/412 (50%), Gaps = 7/412 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ Y +++ + F ++ P ++ +T+ Y ++ + + A ++L+ Sbjct: 1 MLRVLFYLVIVAALGFGFAWLADRPGELDVTFAGNHYNVPLITAVAGIVAIVAAILILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P L R D+GY++L TGL++ A + AR+M Q + E Sbjct: 61 LVKSIIQSPYTLRRHFRARKRDRGYQSLSTGLIAAGAGDAEAARRMTKQAGQLLSSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q A+ E + A + E M+ P TR + LY E+ R+G ++A+ YA +A Sbjct: 121 LIKLLEAQTAMLEGRTEDARKGFEAMVDDPETRLLGLRGLYIEAQRVGAHDAARHYAAEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 +P W + AV+ Q+ +W A+ ++ +K+ + RA LL A+++ Sbjct: 181 AAQAPQLEWASSAVMGQFCAEGDWDAALKLVDARKQALSHSKDVVKKERAALLTAKAMAV 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D + A+E+ KL + + A++ AA++L S RK ILE WK PHP+IA Sbjct: 241 VDV-DHAQARTLALEANKLAPDLVPAAVVAARALFSDGDIRKGSKILEAAWKRFPHPDIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y + S +T +LKRA L + + E + +++ A E G A A ++ + Sbjct: 300 STYVYARSGDTAQDRLKRAKHLVSLRSNNAEGSLALARAAYEAGDYRLARDNAEQVLRAS 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLP 407 PR+ +LLLA IE+A + + K+ W A+ A DP W + DGY+S W P Sbjct: 360 PRESAYLLLADIEEAETGDQGKVREWLARAVKAPRDPAWTA-DGYVSEQWSP 410 >gi|119384727|ref|YP_915783.1| HemY domain-containing protein [Paracoccus denitrificans PD1222] gi|119374494|gb|ABL70087.1| HemY domain protein [Paracoccus denitrificans PD1222] Length = 596 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 103/499 (20%), Positives = 194/499 (38%), Gaps = 24/499 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF-VILSILYFFLFAWILLFA 60 L+++ +F ++ ++ + +S +S+ +G+ Y P ++++ L L WI + Sbjct: 22 LKILIFFAIVLVLTLGAMQLSETGHGLSMVYGSTEYTLGPVQLVIAALVVVLLGWITVRL 81 Query: 61 VSRFFLS------CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH 114 + F + + KGY AL G++++A+ LA+ + ++ Sbjct: 82 LGLFLAFLRFLLGDETAINRYFARSRERKGYDALSEGMLAVASGEGKLAQDKAAKAAKFL 141 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 + + LL Q A A E +L P TR + L + GD +A Sbjct: 142 DKPH--VTDLLAAQAAEVAGDSRKAGEVYRRLLSDPRTRFVGIRGLMRQKLDEGDTVTAL 199 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLI 230 + A KA + P V + ++Q +W A L K++ + R A+L + Sbjct: 200 KLAEKAYALKPKHAEVQDTLLQLQTRQGDWKGARAVLKDKRQQGQLPKDVHIRRDAVLAL 259 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + E G+ I++ AI + + + I A++ AA+S I+QN R A +L+K W V Sbjct: 260 KEASEVLAHGNSISAREAAISANRASPDLIPAAVLAARSYIAQNDPRNAGRVLQKTWSVR 319 Query: 291 PHPEIANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PHP IA Y ++ + +L+R L N + E+ ++ +++ L A Sbjct: 320 PHPSIAATYAEIVPDEKPAARLRRFEDLMRQNPDHEETRLLRAELLLAAEDFPGARRALG 379 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLPL 408 + P +LA +E+ + + AL A P W+ D + + + W P Sbjct: 380 DLAEKHPTVRSLSILAAVERGEGGDDAVVRGILARALVASRGPQWVCDKCHNVMADWSPT 439 Query: 409 SPISKTLCYFEWKIP--TKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466 W P S+ L + P NG +P+ Sbjct: 440 CDSCGGFDTLTWCEPDTPAWGATASNGVEMLPLLVGAPHG-------NGAGADVPAPPVP 492 Query: 467 SSFEDSTIHPLDPHIRQPD 485 ++ +T P P+ Sbjct: 493 AAQARATPPVPQPEAPAPE 511 >gi|39933335|ref|NP_945611.1| HemY-like [Rhodopseudomonas palustris CGA009] gi|39652960|emb|CAE25702.1| unknown protein [Rhodopseudomonas palustris CGA009] Length = 565 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 129/543 (23%), Positives = 243/543 (44%), Gaps = 56/543 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + +I+L V+ P +V ++W + + V ++ + A +L +A Sbjct: 1 MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + R + A+ GL+++ + AR +H+ +++H H+ Sbjct: 61 IILGVVRAPGWMKRGRSSRRSARARNAITQGLLAVGHGDSSTAR-LHANAARRHAPHD-P 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A E A M T+ + LY E+ R D +A A +A Sbjct: 119 LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L + P+ W ++AV+ +W+ A+ L + K + R RA+LL AR+++ Sbjct: 179 LRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTARAID- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ D + A+E+ KL + A++ AAK L ++ R+A ++E W+ PHP++A Sbjct: 238 LEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPHPDLA 297 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y +L +T +L R L + +ES + +++ A++ GS +A + + Sbjct: 298 STYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPYLDM- 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE + +T K WT A+ A+ DP+W + DGY+S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415 Query: 416 CYFEWKIPTKS--------------------------PEYISSENINFSLEMAYPA---- 445 F+W++P + P +SE + ++E A A Sbjct: 416 DAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAPEAPIVA 475 Query: 446 -DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQPDDPGI 489 + +++ K P+ + P+ P +R PDDPG+ Sbjct: 476 PKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRAPDDPGV 535 Query: 490 KEQ 492 E Sbjct: 536 DED 538 >gi|192288690|ref|YP_001989295.1| HemY domain protein [Rhodopseudomonas palustris TIE-1] gi|192282439|gb|ACE98819.1| HemY domain protein [Rhodopseudomonas palustris TIE-1] Length = 565 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 129/543 (23%), Positives = 244/543 (44%), Gaps = 56/543 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + +I+L V+ P +V ++W + + V ++ + A +L +A Sbjct: 1 MLRIVLFLVIIALAAAGAAWVADQPGEVVLSWNDWKASMTLPVFALVIGAGVVAVMLAWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P+ + R + A+ GL+++ + AR +H+ +++H H+ Sbjct: 61 IILGVVRAPSWMKRGRSSRRSARARNAITQGLLAVGHGDSGTAR-LHANAARRHAPHD-P 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A E A M T+ + LY E+ R D +A A +A Sbjct: 119 LALLLQAQSAQLEGDREGARRAFLAMAARKDTKSLGMRGLYIEAQRADDPYAALAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L + P+ W ++AV+ +W+ A+ L + K + R RA+LL AR+++ Sbjct: 179 LRVQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTARAID- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ D + A+E+ KL + A++ AAK L ++ R+A ++E W+ PHP++A Sbjct: 238 LEESDESLARDSALEANKLAPTLVPAAVLAAKYLAEAHQVRRAMKVIEAAWQAQPHPDLA 297 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y +L +T +L R L + +ES + +++ A++ GS +A + + Sbjct: 298 STYANLKPGDTATARLGRVENLVGKGPQQLESALAIARAAIDAGSFSRARTVLQPYLDM- 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE + +T K WT A+ A+ DP+W + DGY+S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415 Query: 416 CYFEWKIPTKS--------------------------PEYISSENINFSLEMAYPA---- 445 F+W++P + P +SE + ++E A A Sbjct: 416 DAFQWQVPVSALPSSKAVVVDDKFHDALIASSAGETLPASTTSEAVTVTVEAAPEAPIVA 475 Query: 446 -DDLQSMLNNGKKNHLPSIKKVSSF---------------EDSTIHPLDPHIRQPDDPGI 489 + +++ K P+ + P+ P +R PDDPG+ Sbjct: 476 PKEPTAVVEEPAKADKPAKTTEAPAEAVAPPAASSSPLFHRRKEAAPVIPIVRAPDDPGV 535 Query: 490 KEQ 492 E Sbjct: 536 DED 538 >gi|92116186|ref|YP_575915.1| HemY-like [Nitrobacter hamburgensis X14] gi|91799080|gb|ABE61455.1| HemY-like protein [Nitrobacter hamburgensis X14] Length = 552 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 123/528 (23%), Positives = 228/528 (43%), Gaps = 41/528 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R+I + +I+L V+ + ++W T+ L + A +L+++ Sbjct: 1 MFRIILFLVLIALAALGATWVADQTGTIVMSWDVWRVETTLPAFALGLGLLVVAVLLVWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + +R +G A+ GL++I + AR + +E Sbjct: 61 IVRGLWQAPRRIRRARRERRNRRGRDAITRGLLAIGHGDAAAAR--THARVARRLVSHEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A + + A M + TR + L+ E+ R D +A A +A Sbjct: 119 LTLLLHAQSAQLDGDADRAQRAFRAMAERADTRLLGLRGLFIEAQRADDPQAAVAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 L +SP + W ++A + +W+ A+ L++ + + R R +LL AR+LE Sbjct: 179 LKVSPSSIWASQAALGFRCARGDWTGALAILDKNVAAGLIDKALYRRQRGVLLTARALE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +K D AS + +E++K I A + A+K L N+ R+A I+E W PHP++A Sbjct: 238 LEKSDRDASRNTVMEAVKYAPTLIPAVVLASKYLSEGNQMRRAMRIIETAWLAQPHPDLA 297 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H++ ++ +L R L E ES + +++ A++ +A + A Sbjct: 298 DAYAHVMPGDSARERLARVETLAENASGHPESAMAIARAAIDASEFARAREVLEPLI-AA 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE ++ + WT A+ A+ DP+W + DGY+S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHNEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415 Query: 416 CYFEWKI-----PTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470 F+W+ P+ P + +E + A + L + + ++ + + S Sbjct: 416 DAFQWQAPLAALPSSRPALVEAEFSDQIASDAPRFEALPAASQSAARDGDGATVAIESSS 475 Query: 471 DST--------------------------IHPLDPHIRQPDDPGIKEQ 492 T I + +R PDDPG+ + Sbjct: 476 PETAAMSAEAATSTTFRTQSDLDKAGASDIPAVIAIVRAPDDPGVDDN 523 >gi|21328634|gb|AAM48640.1| conserved hypothetical protein [uncultured marine proteobacterium] Length = 491 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 93/488 (19%), Positives = 189/488 (38%), Gaps = 16/488 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +++++ + ++ L+ + I + ++ L ++ L+ Sbjct: 5 LVKILSFVAMVMLISFGAGRLMEAQGGFMIQYAGLELSFGALQAALLVLGLLVSFWLVLK 64 Query: 61 VS-------RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 + RF L + +G++AL GLM++A+ + A M Sbjct: 65 LLGLVVALLRFINGDETALSRYFDRNRERRGFEALSDGLMALASGDGRDA--MAKARKAD 122 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L L+ Q A+A A + +L+ P TR Y L + + GD A Sbjct: 123 RLLNRPDLTNLIMAQAAVANGDRQTAKATYKKLLKDPKTRFVGTYGLLQQHLQDGDTEVA 182 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILL 229 + A A + P + +++ ++W T L K K+ R A+ Sbjct: 183 LKLAEHAFGLKPRHGETQDVLLKLQAGREDWRGVRTTLTAKLKHGSLPKDVHKRRDAVFA 242 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +++S + +G + + A+E+ +L + A+I +A+ Q ++A IL W++ Sbjct: 243 LSQSRDLRAEGKLDEAQIYAVEANRLAPGLVPAAILSAEGHREQKNVKQASRILRAAWQL 302 Query: 290 NPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++A + L + +LKR + + + E+ ++++++ + M D A Sbjct: 303 APHPDLAAGFAALAPDEASAARLKRFGQFTKGTESHPETKMLMAELYVAMADFDAARQAL 362 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD-GYLSSVWLP 407 K P +LA IE+ + + + A+ A DP WI D+ G++ W P Sbjct: 363 GDLAKTDPTMRALTILAAIERGDGADDQSVRRLLTQAISAQRDPQWICDNCGHVHHDWEP 422 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 + + + WK P S E +S + + + +D+ L + V Sbjct: 423 VCLNCEAIDSIAWKRPPMS-EAVSPDMLPLIVGHMARSDEDFPPLLEPEDLSQADASAVK 481 Query: 468 SFEDSTIH 475 D T Sbjct: 482 IAADDTPL 489 >gi|85713683|ref|ZP_01044673.1| HemY protein [Nitrobacter sp. Nb-311A] gi|85699587|gb|EAQ37454.1| HemY protein [Nitrobacter sp. Nb-311A] Length = 577 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 121/526 (23%), Positives = 229/526 (43%), Gaps = 40/526 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR+I + +I+L ++ + ++W T+ V L + A +L+++ Sbjct: 27 MLRIILFLVLIALSALGASWIADQTGTIVLSWDVWRIETTLPVFALGLGLLVVASLLVWS 86 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P L R +G A+ GL++I + AR + + + Sbjct: 87 AVRGLWQAPTRLRRARRARRTARGRDAITRGLLAIGHGDATAAR--NHARVARRLVSQDP 144 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A + + A M + TR + L+ E+ R GD +A A +A Sbjct: 145 LALLLHAQAAQLDGDADRAQRVFRTMAERADTRLLGLRGLFIEAQRAGDPAAAVAIAEEA 204 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 L SP + W ++A + +W+ A+ L++ + + + R R +LL AR+LE Sbjct: 205 LKTSPSSIWASQAALGFRCARGDWAGALAILDRNAASGRIDKALYRRQRGVLLTARALE- 263 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D S +E++K + A + A+K L N+ R+A ++E W PHP++A Sbjct: 264 LETSDRDLSRQTVMEAVKFAPTLVPAVVLASKYLSEANQMRRAMRMIETAWLAQPHPDLA 323 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H++ ++ + +L R +L E ES + +++ AL+ +A + A Sbjct: 324 DAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAALDASEFARARDALEPLI-AA 382 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE + ++ + WT A+ A+ DP+W + DGY+S W P+SP++ + Sbjct: 383 PTQRVAMLMAEIEHSEHGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRV 441 Query: 416 CYFEWKI-----PTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470 F+W+ P+ P + ++ + E + L + G+ + E Sbjct: 442 DAFQWQTPLAALPSSRPPLVEADVSDQIAEETPRVEALPAASPGGESKAQDDAMSPADVE 501 Query: 471 DST-------------------------IHPLDPHIRQPDDPGIKE 491 ++ I + P +R PDDPG+ + Sbjct: 502 AASFGTIPMPDETAASPISHTEEDKPGAIPDVIPIVRAPDDPGVDD 547 >gi|304392696|ref|ZP_07374636.1| HemY domain-containing protein [Ahrensia sp. R2A130] gi|303295326|gb|EFL89686.1| HemY domain-containing protein [Ahrensia sp. R2A130] Length = 674 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 127/434 (29%), Positives = 217/434 (50%), Gaps = 13/434 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITW----GNRLYRTSPFVILSILYFFLFAWI 56 MLRL +F ++ + F + P +++ W G V + +L LFA I Sbjct: 1 MLRLAVFFLILFAIAAGFAWFADNPGTITLQWPWLNGGEPLAVDLLVAIVVLAVVLFAAI 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 +L+++ L+ P R DKGY+AL GL++ A N PLAR++ S+ Sbjct: 61 VLWSIIAAILTSPKTFGRWREGRRRDKGYEALSRGLVAANAGNAPLARRLTKECSKH--L 118 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 +E LV LL+ Q AL E ++ A ML+ TR + LY E+ + G+ +A + Sbjct: 119 DDEPLVALLDAQTALLEDDHDCARRCYTTMLEKDETRLLGLRGLYLEAEKEGEGEAAGHF 178 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIAR 232 A +A+ +P PW T+A+++ K W A+ L+ + +N +A +L A Sbjct: 179 AREAVKANPGTPWATQAMLRSQTATKNWEEALKTLDLNRSAGVYDKDAYNGRKAAILTAL 238 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +++ D + A+ + KL A++ AA+ + N RKA +LE WK PH Sbjct: 239 AMDEEDAS-PEKARSHALAAHKLAPTLAPAAVVAARMSVRLNDMRKAAKVLETSWKAEPH 297 Query: 293 PEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 PEIA+ Y HL + ++V +LKRA L+ S++ + ++++A++ G + A A Sbjct: 298 PEIADAYIHLRNGDSVLDRLKRAQTLDGKRSNSIDGQLAIAQVAIDAGEYETARDALEAA 357 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPI 411 +I P + LL+A +E+A + + ++ W A+HA D W++ DG + W+P SP+ Sbjct: 358 FRITPTERACLLMADLEEAQNEDMGRVREWLSRAVHAPRDKAWVA-DGVAAEEWMPASPV 416 Query: 412 SKTLCYFEWKIPTK 425 + + FEWK P + Sbjct: 417 TGEINAFEWKQPVE 430 >gi|328542000|ref|YP_004302109.1| HemY N-terminal domain protein [polymorphum gilvum SL003B-26A1] gi|326411750|gb|ADZ68813.1| HemY N-terminal domain protein [Polymorphum gilvum SL003B-26A1] Length = 597 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 130/491 (26%), Positives = 224/491 (45%), Gaps = 9/491 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R + +F V+ V F ++ P VS++W ++ P V ++ L +L F Sbjct: 1 MIRALVFFAVLFAVAFGFAWMADLPGVVSVSWQGYVWEQPPVVAAVLIGLALVLVLLAFW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L P + L +R DKGY+AL GL+++ N AR+ + E Sbjct: 61 LVGAILRSPRIARRFLRRRRRDKGYEALSHGLIALGTGNAKRARRYGQDADK--LLRGES 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL Q A Q++ A ++ E ML+ P TR ++ L+ E+ R + +A+ YA +A Sbjct: 119 AARLLLAQAAQMSGQHDEARQRFEAMLKDPETRALGLHGLFIEAERQNEPIAARHYAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLEN 236 P W AV+ +A +W AI L + + + K + R+RA+LL AR+LE Sbjct: 179 ARAVPGLDWAGRAVLGYQAVAGDWEAAIATLERNYAARLVDKKTYRRHRAVLLAARALEL 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D GD + A E+ L + + A++ AA+ + RKA I+E W+++PHP++A Sbjct: 239 ED-GDPETALTLAKEAHGLALDLVPAAVVAARLATRKGDVRKAAKIVEATWRLSPHPDLA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H + + +L R L + E + V++ ALE +A + ++ Sbjct: 298 DAYAHARIGDAALDRLARVRTLAAQRAHTAEGALAVARAALEAREFGEAREQLKRVLRSE 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + F+L+A++E+A + ++ W A+ A D W++ DG + W P+SP++ L Sbjct: 358 PTRGAFVLMAELEEAEHGDRGRVREWLARAVRAPLDKAWVA-DGVVREAWAPVSPVTGRL 416 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475 FEW PT PE E ++ +L A + +P + + Sbjct: 417 DAFEWTTPTGLPETPLVEALDDALFEAPALTVRPAAPKFDTPAEVPPAAGAAPEPAADAA 476 Query: 476 PLDPHIRQPDD 486 P D Sbjct: 477 VSVPAAEPEPD 487 >gi|260464236|ref|ZP_05812429.1| HemY domain protein [Mesorhizobium opportunistum WSM2075] gi|259030039|gb|EEW31322.1| HemY domain protein [Mesorhizobium opportunistum WSM2075] Length = 533 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 140/489 (28%), Positives = 241/489 (49%), Gaps = 14/489 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + V+ + F ++ P D+ IT+ Y+ S V + + A ++ + Sbjct: 1 MIRLLAFLVVVFALGLGFAWLADRPGDMVITFNGYQYQVSLMVAAVAVVAVVAAVMIAWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P + R D+GY+AL TG+++ A + LARK ++ E Sbjct: 61 LVKSLWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E + A +K E ML P R + LY E+ +GD N+A+ YA +A Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAESLGDRNAARHYAGRA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 ++P W E+ +++ +W A+ ++ + + NR RA+LL A++ Sbjct: 181 AVMAPQLAWAAESTLEELTARGDWDGALKLVDAQKSTRQIERDAANRRRAVLLTAKAQSL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D A+ A+E+ KL + A++ AA +L QN RK ILE WK PHPE+A Sbjct: 241 AD-SDPNAARTAALEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILETAWKAEPHPEVA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +YTH + V +L RA +L+E+ K ES + V++ AL+ A +A A+++ Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAMDFSTARREAEAAIRMD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ +LLLA IE+A + + K+ A+ A DP W++ DG +S W P+SP++ L Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSKAVRAPRDPAWVA-DGVVSERWAPVSPVTGRL 418 Query: 416 CYFEWKIPTK-------SPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 FEW+ P + S + + +A PA + + + + K + Sbjct: 419 DAFEWRAPMERLGQLIDSRDETPGAAVPVIEALAKPASETPADVIEHAAASSEATGKAAE 478 Query: 469 FEDSTIHPL 477 + + P+ Sbjct: 479 SREDHVKPV 487 >gi|75674672|ref|YP_317093.1| HemY protein [Nitrobacter winogradskyi Nb-255] gi|74419542|gb|ABA03741.1| HemY protein [Nitrobacter winogradskyi Nb-255] Length = 555 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 121/530 (22%), Positives = 229/530 (43%), Gaps = 43/530 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR+I + +I+L ++ + ++W T+ V L + A +L ++ Sbjct: 1 MLRIILFLVLIALSALGATWIADQTGTIVLSWDVWRIETTIPVFALGLGLLIVASLLAWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V P + +R +G A+ GL++I + + + + N+ Sbjct: 61 VVHGLWQAPTRMRRARRERRIARGRDAITRGLLAIGYGDAAA--ARNHAKAARRLVSNDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A + + A M + TR + L+ E+ R GD +A A +A Sbjct: 119 LALLLHAQAAQLDGDADRAQRAFRTMAERNDTRLLGLRGLFIEAQRAGDPAAAVAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 L SP + W ++A + +W+ A+ L++ + + + R R +LL AR+LE Sbjct: 179 LKTSPSSIWASQAALGFRCARGDWTGALAILDKNVASGRIDKALYRRQRGVLLTARALE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +K D S +E++K I A + A+K L N+ R+A ++E W PHP++A Sbjct: 238 LEKSDRDLSRQTVMEAVKFAPTLIPAVVLASKYLSEANQMRRAMRLIETAWLAQPHPDLA 297 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y H++ ++ + +L R +L E ES + +++ A++ +A + A Sbjct: 298 DAYAHVMPGDSALQRLARVEKLSEKAPGHPESAMAIARAAIDASEFARAREVLEPLI-AA 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE ++ + WT A+ A+ DP+W + DGY+S W P+SP++ + Sbjct: 357 PTQRVAMLMAEIEHNERGDSGRARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPLTGRV 415 Query: 416 CYFEWKI-----PTKSPEYISSENINFSLEMAYPADDLQSMLNNG--------------- 455 F+W+ P+ P + +E + E A + L + + Sbjct: 416 DAFQWQTPLSALPSSRPPLVEAEVSDQIAEDAPRVEALPAATSTEDFKAQDGAIPPAGVE 475 Query: 456 ---------KKNHLPSIKKVSSFEDST----IHPLDPHIRQPDDPGIKEQ 492 + + E+ I + P +R PDDPG+ + Sbjct: 476 ASSSGTISMPDETATASADYTPSEEDNKPGAIPDVIPIVRAPDDPGVDDD 525 >gi|114769711|ref|ZP_01447321.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium HTCC2255] gi|114549416|gb|EAU52298.1| Uncharacterized HemY-like membrane protein [alpha proteobacterium HTCC2255] Length = 478 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 98/472 (20%), Positives = 188/472 (39%), Gaps = 26/472 (5%) Query: 12 SLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWI-------LLFAVSRF 64 +LV ++ +++ + + +P + + + + + +L A+ +F Sbjct: 16 ALVTLVTGVIIDAGGVITMQFASYEISLTPIQGIIGIILCMSSLLATKWLFGILVAIFKF 75 Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124 F + +K ++GYKAL ++S+AA A +++ + L L Sbjct: 76 FNGDETAITRYFNKNKEERGYKALADSMVSMAAGEGKDA--INNANRAERLLQRPQLTNL 133 Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + Q A A + + +L+ TR + L + GD +A A KA I Sbjct: 134 VSAQAAEKFGDNKRALKYYKRLLKNDQTRFVGLQGLLKQKLLEGDNETALLLAEKAFSIR 193 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLENADKG 240 P+ + ++W A + + K R AILL+A + + G Sbjct: 194 PNHDQTLNVLFDLQTEKQDWKGAQKTIKANVRAGKLPKDIGLRREAILLLADAKAMLEAG 253 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 ++ AI + K + I A+I AA+ + N KR + IL+K W +NPHP++A + Sbjct: 254 EIDTGKAAAIAANKSSPDLIPAAILAAEMYMLDNNKRASTKILKKTWGLNPHPDLATAFA 313 Query: 301 HLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + E + + KR ++ E E+ ++++++A+ A P Sbjct: 314 EINLKETSGERRKRFSSFVKLKSEHYETKLLLAELAIGDEDFPAARRAIKDLTSTNPTVR 373 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYF 418 L+A IE+ + + W AL A P WI + + W P +T Sbjct: 374 SLALMAAIEKGEGADEKTVRAWLNKALTASRGPQWICEKCSNIHLSWQPRCENCETFDSL 433 Query: 419 EWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFE 470 WK P + + I++E ++F+ + + G +N LPS+ + E Sbjct: 434 SWKAPPRDAKKITNEKLDFT-----------AGILTGAENSLPSVSDIDDAE 474 >gi|217977723|ref|YP_002361870.1| HemY domain protein [Methylocella silvestris BL2] gi|217503099|gb|ACK50508.1| HemY domain protein [Methylocella silvestris BL2] Length = 516 Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats. Identities = 120/495 (24%), Positives = 211/495 (42%), Gaps = 13/495 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + V+ + + + P ++ + W TS + ++ ++ + L+ Sbjct: 1 MIRVLLFLAVLIGLAIAEAWLIERPGELVLNWQGYKIETSVLMGIAAVFVAAAILLGLWM 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + RF + P+++ R +KGY AL G++++ A + AR+ + V Q N+ Sbjct: 61 LLRFIFNIPSLMALASRGRRREKGYAALSRGMIAVGAGDTQAARR--AAVEAQRMLPNDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A M + R + L+ E+ R GD+ AQ YA A Sbjct: 119 LALLLKAQSAQLSGESGSAEAAFTEMTRRNDMRVLGLRGLHVEAERQGDVEKAQHYAETA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236 +I+P PW +A V A +W A+ L K + R+RA+L A ++E Sbjct: 179 REIAP-LPWAAKANFAHKVAAGDWRGALALLESGAGSKHIDKTIRERSRAVLETAIAIEK 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD + A ++K + A AA+ Q RKA ++E W HP+IA Sbjct: 238 AD-AQPAEALALARAAVKRAPTLVPAVALAARLTSEQGDARKAAKLIEAGWAGTHHPDIA 296 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-- 353 IY L E++ +LKRA+ L ++ ES ++V++ A+ G A ++ Sbjct: 297 KIYVGLYPGESSADRLKRAISLAQLAPREPESKIMVAEAAIAAGDFKAAREAMQPLIEGP 356 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 P + L+A++E+ I W A A PDP W++ DG S W P+SP++ Sbjct: 357 ERPTARMCRLMAELEEKQHGAAGYIREWLTRASLAPPDPTWVA-DGVASDQWRPISPVTG 415 Query: 414 TLCYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 L F W+ P + +E+ F+ + L ++ + Sbjct: 416 KLDAFVWQKPVERLSSGNEAEDAIFAQILPPEPPLLLEEAQTASGAKTGALDGPPHPDPE 475 Query: 473 TIHPLDPHIRQPDDP 487 P+ P +P Sbjct: 476 IAIPMGPPPPTTAEP 490 >gi|110635528|ref|YP_675736.1| HemY-like [Mesorhizobium sp. BNC1] gi|110286512|gb|ABG64571.1| HemY-like protein [Chelativorans sp. BNC1] Length = 533 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 144/519 (27%), Positives = 264/519 (50%), Gaps = 31/519 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + ++ L+ F ++ P ++++T+G Y+ + + +L + A ++L+ Sbjct: 1 MFRILLFLVIVMLLGLGFAWLADRPGELAVTFGGYQYQVTLMMAAVLLVAAIAAVMILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P + R D+GY+AL TGL++ A + LAR+M ++ + E Sbjct: 61 IVRGIWTSPYTVRRYFRARRRDRGYQALSTGLIAAGAGDAGLARRMGQQAAKLISSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LL+ Q A+ E + A K + M P TR + LY E+ R G+ +A+ YA +A Sbjct: 121 LIHLLDAQAAMLEGNHEAARAKFQAMADDPETRLLGLRGLYLEAERHGEREAARHYADEA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLEN 236 I+P W +A ++ +W A+ L+++K ++KE R RA+LL A+++ Sbjct: 181 TKIAPQLGWAADATLEAKADEGDWQGALALLDKQKPSSKEERAALARKRAVLLTAQAMAQ 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + A+ A+E+ +L + + A++ AA++L Q+ R+ +LE +W +PHPE+A Sbjct: 241 LNM-NPAAAKTAALEAHRLQPDFVPAAVTAARALFRQDDLRRGAKVLEAVWAKSPHPEVA 299 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +IY H ++T +L RA +L + + ES++ V++ AL+ G +A A A+++ Sbjct: 300 DIYVHARPGDSTHDRLTRAKKLRRLKPNNAESVLAVARAALDAGEYGEAREAAEAAVRLD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 PR+ FLLLA IE+A + ++ YW A+ A DP W++ DGY++ W P SP++ L Sbjct: 360 PREGAFLLLADIEEAERGDQGRVRYWLAKAVRAPRDPAWVA-DGYVAERWAPASPVTGRL 418 Query: 416 CYFEWKIPTKS-PEYISSENINFSLE------MAYPADDLQSMLNNGKKNHLPSIKKVSS 468 FEW+ P + + I E +L A ++ +L + + + S Sbjct: 419 DAFEWRAPMERLGQIIEGEEALRALPPLETGVKASEEEEADDVLLPAEAEPVVEVAAQSE 478 Query: 469 FEDST---------------IHPLDPHIRQ--PDDPGIK 490 E + P + IR PDDPG++ Sbjct: 479 SEKAETALPGDNGAKEPAADAEPTEEDIRPPLPDDPGVE 517 >gi|209883479|ref|YP_002287336.1| HemY protein [Oligotropha carboxidovorans OM5] gi|209871675|gb|ACI91471.1| HemY protein [Oligotropha carboxidovorans OM5] Length = 572 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 118/470 (25%), Positives = 214/470 (45%), Gaps = 15/470 (3%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 V+ + ++W TS V + L +++++V R F P L ++ Sbjct: 20 WVADQGGGLVLSWSGWRIETSLPVAALLGVILLAVALVVWSVVRTFWKAPEGLRRRRREK 79 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 K +A+ GL+++ + A++ ++ ++ L +L+ Q A E A Sbjct: 80 RAAKARRAITQGLIAVGTGDSFAAQRHAGMATRLAA--HDPLALMLQAQTAQLEGDRAGA 137 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 M + R + L+ E+ R D +A A +AL I+P +PW ++AV+ Sbjct: 138 QRAFRAMAERKDMRLLGLRGLFIEAQRSDDAYTAVAMAEEALKIAPASPWASQAVLGFRC 197 Query: 200 LAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +W A+ L+ K + R R +LL AR+L ++ D AS A+E++KL Sbjct: 198 AGSDWDGALALLDTNKAAGLVEPAVYRRERGVLLTARALA-LEERDRDASRKSAMEAVKL 256 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRA 314 + A++ AAK N+ R+A ++E W NPHP++A+ Y H+ ++ +L R Sbjct: 257 APQLVPAAVLAAKFYSEDNQVRRAMRVVEAAWVANPHPDLADAYAHVRLGDSARERLSRV 316 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 L + + E + V++ A++ G ++A + AP + + LL+A++E+AN + Sbjct: 317 EMLAQKTPDHREGRLAVARAAIDAGEFERAREALAPLID-APTQRVALLMAELERANH-D 374 Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK--SPEYISS 432 + WT A+ A PDP W + DGY+S W P+SP++ L F+W P +PE + Sbjct: 375 EGRAREWTARAVRAAPDPAWTA-DGYVSDRWRPVSPVTGRLDAFQWVTPVAALAPERATI 433 Query: 433 ENINFSLEMAYPA--DDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480 E +L M A + + + +L + KV + D Sbjct: 434 EAETPTLPMPPIAIESKPEEKADANPETNLEADVKVDTAPDEAAASPIAE 483 >gi|319780790|ref|YP_004140266.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166678|gb|ADV10216.1| HemY domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 534 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 149/523 (28%), Positives = 251/523 (47%), Gaps = 33/523 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + V+ + F ++ P D+ +T+ Y+ S V + + A ++L+ Sbjct: 1 MIRLLAFLIVVFALGLGFAWLADRPGDMVVTFNGYQYQVSLMVAAVAVVAVVAAVMILWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + P + R D+GY+AL TG+++ A + LARK ++ E Sbjct: 61 LLKALWNSPYTISRYFRVRRRDRGYQALSTGMIAAGAGDGALARKKTKEAAKLIRSDQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L++LLE Q +L E + A +K E ML P R + LY E+ R+GD N+A+ YA +A Sbjct: 121 LIHLLEAQASLLEGDHEGARQKFESMLDDPEMRLLGLRGLYLEAERLGDRNAARHYAGRA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 ++P W E+ +++ +W A+ ++ + + NR RA+LL A++ Sbjct: 181 AAVAPQLAWAAESTLEELTARGDWDGALKLVDAQKATRQIERDAANRRRAVLLTAKAQAL 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD D A+ AIE+ KL + A++ AA +L QN RK ILE WK PHPEIA Sbjct: 241 AD-SDPAAARTAAIEANKLRPDFAPAAVAAAAALFKQNDVRKGSKILEAAWKAEPHPEIA 299 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +YTH + V +L RA +L+E+ K ES + V++ AL+ A +A A+++ Sbjct: 300 ELYTHARPGDAVLDRLNRAKKLQEMKKNHAESSMTVARAALDAQDFATARREAEAAIRMD 359 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 R+ +LLLA IE+A + + K+ A+ A DP W++ DG +S W P+SPI+ L Sbjct: 360 RREGAYLLLADIEEAETGDQGKVRQLLSRAVRAPRDPAWVA-DGVVSERWAPVSPITGRL 418 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNG-------------------- 455 FEW+ P + + + + A + L + Sbjct: 419 DAFEWRAPMERLGQLIDSHDDAPAGAAPVIEALAKPTSEKRPIEVIDDAGGETSAGKQAE 478 Query: 456 --KKNHLPSIKKVS----SFEDSTIHPLDPHIRQPDDPGIKEQ 492 +++H+ I + + + P + R PDDPG+ Sbjct: 479 SREEDHVRPITAAAFAAVPSDAEGVEPAEELARLPDDPGVDPD 521 >gi|115522092|ref|YP_779003.1| HemY domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115516039|gb|ABJ04023.1| HemY domain protein [Rhodopseudomonas palustris BisA53] Length = 577 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 10/428 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR+I + VI+L ++ P +V ++W S V ++ L + +L +A Sbjct: 1 MLRIILFLVVIALAATGAAWLAEQPGNVVLSWNGWQAEASLAVFSMVVGGILVSVLLAWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P L +R + A+ GL+++ + +AR + + N+ Sbjct: 61 IITGLWRSPRRLARSRRERKLARARHAVTQGLLAVGHGDAAIARAHANAARRH--SPNDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A M T+ + L+ E+ R D +A A +A Sbjct: 119 LALLLQAQAAQLDGDREGAKRAFLAMASRDDTKSLGMRGLFIEAQRAEDPYAALTVAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L +SP + W AV+ +WS A+ L + K + R R +LL AR++E Sbjct: 179 LRLSPGSHWAAHAVLGFRCARSDWSGAMDILENNLASGLIDKKTYRRQRGVLLTARAIEC 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D+ + A+E++KL + A++ AAK + ++ R+A I+E W +PHP++A Sbjct: 239 ED-ADVSVARDSALEAIKLVPTLVPAAVLAAKYMSEAHQLRRALKIIEAAWIAHPHPDLA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y H+ ++ +L R L +E + +++ A++ +A ++ A Sbjct: 298 EAYAHIKQGDSAQARLSRIETLAAKAPGHIEGALAIARAAIDASDFTRARNALAPYVE-A 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE A+ +++ WT A+ A+ DP+W + DG +S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHADRNDSRAARAWTLRAVRALRDPVWTA-DGCVSDRWRPVSPVTGRL 415 Query: 416 CYFEWKIP 423 F+W P Sbjct: 416 DAFQWTSP 423 >gi|316931768|ref|YP_004106750.1| HemY domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315599482|gb|ADU42017.1| HemY domain protein [Rhodopseudomonas palustris DX-1] Length = 565 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 126/543 (23%), Positives = 234/543 (43%), Gaps = 56/543 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + +I+L V+ P +V ++W + + V + L + A +L +A Sbjct: 1 MLRIVLFLVIIALAAAGAAWVAEQPGEVVLSWNDWRASMTLPVFAAALGAGVVAVMLAWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + R ++ A+ GL+++ + + + ++ Sbjct: 61 IVLGVVRAPGWMKRGRSSRRSERARNAITQGLLAVGHGDSAA--ARAHANAARRHAPHDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A E A M T+ + LY E+ R D +A A +A Sbjct: 119 LALLLQAQSAQLEGDREGARRAFLAMASRKDTKSLGMRGLYIEAQRADDPYAALAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L + P+ W ++AV+ +W+ A+ L + K + R RA+LL AR+++ Sbjct: 179 LRLQPNCAWASQAVLGFRCARSDWTGALEILERNLSAGLIDKKAFRRQRAVLLTARAID- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ D + A+E+ KL + A++ AAK L ++ R+A ++E W+ PHPE+A Sbjct: 238 LEESDESLARDSALEANKLAPTLVPAAVLAAKHLAGAHQVRRAMKVIEAAWQAQPHPELA 297 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + Y +L +T +L R L + +ES V +++ A++ GS +A +++ Sbjct: 298 STYANLKPGDTATARLGRVENLVGKGPQQLESAVAIARAAIDAGSFGRARTALEPYLEM- 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE + +T K WT A+ A+ DP+W + DGY+S W P+SP++ L Sbjct: 357 PTQRVAMLMAEIEHGDRGDTAKARAWTLRAVRALHDPVWTA-DGYVSDHWRPVSPVTGRL 415 Query: 416 CYFEWKIPTKS--------------------------PEYISSENINFSLEMAYPADDLQ 449 F+W++P + P +SE + ++E A A + Sbjct: 416 DAFQWQVPVSALPSSKAVVIDDKFHDALIASATTEALPASETSEAVTVTVEAAPEAPIVT 475 Query: 450 SMLNNGKKNH-------------------LPSIKKVSSF-EDSTIHPLDPHIRQPDDPGI 489 P+ F P+ P +R PDDPG+ Sbjct: 476 PKEPTVAAEEPAKADKPAKAAEAPAETMAAPASSPSPLFHRRKEAAPVIPIVRAPDDPGV 535 Query: 490 KEQ 492 + Sbjct: 536 DDD 538 >gi|158421882|ref|YP_001523174.1| putative HemY protein [Azorhizobium caulinodans ORS 571] gi|158328771|dbj|BAF86256.1| putative HemY protein [Azorhizobium caulinodans ORS 571] Length = 532 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 112/479 (23%), Positives = 212/479 (44%), Gaps = 12/479 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + V++ + ++ P ++ + W T+ V L+ L F A ++++ Sbjct: 1 MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVPVALAALAAFSVALLIVWH 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L P M+ +R +KG+ A+ GL++I + + L + E Sbjct: 61 LGALLLRSPRMIATFSRRRRREKGWAAVSRGLVAIGSGD--LDAARRARAEALRYLPKEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A A + A ML P TR + L+ E+ R GD+ +A+ A +A Sbjct: 119 LTQLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHMEARRSGDIAAARMLAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 + SP W +AV++ +++ A L ++ + ++ R RA+ L+A Sbjct: 179 ANQSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAV-LLAAEALA 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++ D + A+E+++L + A+ A + L + + RKA I+E + PHPE+A Sbjct: 238 LEQTDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPELA 297 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + HL + +LKR L + ESL+ ++ ++ +A A + Sbjct: 298 QVAAHLRPGDAALDRLKRIRTLAAKAPDHAESLIALAHATIDANEFAEARALLQR-LSAE 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + LL+A++E + + K W AL A DP WI+ DG + W P+SP++ L Sbjct: 357 PTQRVCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIA-DGRVFDAWAPVSPVTGKL 415 Query: 416 CYFEWKIPT--KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS 472 F W +P + + E L +A + ++ + L + + ++ Sbjct: 416 DAFVWAVPPGVSATPVLEHEAERVRLAIAAIREKEEARRELARAAELEKLAASEAVAEA 474 >gi|312114938|ref|YP_004012534.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100] gi|311220067|gb|ADP71435.1| HemY domain protein [Rhodomicrobium vannielii ATCC 17100] Length = 524 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 123/496 (24%), Positives = 211/496 (42%), Gaps = 18/496 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RLI YF +I LV F ++ P +V+I W +TS F+ L LL Sbjct: 1 MTRLIGYFVIIVLVAVGFAWIADRPGNVTIQWLGYDIQTSVFIGSVALLLAFVIVFLLGW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + +R G +A+ G+ + A + A K + + T NE Sbjct: 61 LGLLTWTGPKKFRGRMQRRRQRVGQEAVRRGIFAAGAGDKSAALK--ADAIARRTVPNEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + + E ML+ P E + LY E+ + +A+++A +A Sbjct: 119 LALLLQAQSAQLNEDSIASRQAFERMLEKPEMAELGLRGLYMEAKKANQNEAAKQFAERA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLEN 236 L +P W + A+ + +W A+ L K++ E +R R++LL ++E Sbjct: 179 LAANPALAWSSSALFEIQSREGDWRAALKTLQIAKEHRHLAKPEADRRRSLLLTQLAIEL 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + A E+ L I A++ A + L +Q + +A IL + W+ HPEIA Sbjct: 239 ED-SQPSKALAYATEAFDLSPTLIPAAVVAGRILTTQGQTSRATKILTQAWRSTQHPEIA 297 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + H ++ +L R L +++E V V+ A++ A + Sbjct: 298 LTFAHARRGDSPRDRLARVKSLVAAGSQTLEGAVAVAVSAIDAQEWKTARLALEPYLANN 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + L+A+IE + ++ + W A PDP+W++ DG +S+ W P+SP + L Sbjct: 358 PPARVCRLMARIEAGQNRDSGRAREWLAKAARGAPDPVWVAPDGTVSAEWQPISPTTGAL 417 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLP-SIKKVSSFEDSTI 474 FEWK P P S+ +F+ E++ + + + LP S K + Sbjct: 418 GSFEWKTP---PANASANPDDFAAEISA------LDVVSLEGESLPDSYAKTKGLSGRSN 468 Query: 475 HPLDPHIRQPDDPGIK 490 P+D G Sbjct: 469 EPVDVVASPVGKDGSD 484 >gi|86747438|ref|YP_483934.1| HemY-like [Rhodopseudomonas palustris HaA2] gi|86570466|gb|ABD05023.1| HemY-like [Rhodopseudomonas palustris HaA2] Length = 583 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 127/487 (26%), Positives = 217/487 (44%), Gaps = 11/487 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR+I + +I+L V+ P DV ++W V + L + A L++A Sbjct: 1 MLRIILFLVIIALAAAGAAWVAEQPGDVVLSWNAWRAEMRLPVFILGLGGAIVAIGLVWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P + H R K +A+ GL+++ + AR + + ++ Sbjct: 61 IIAALWRAPKRMKHGRAARRSGKANRAITQGLLAVGHGDAAAARSHATAARRHA--PHDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A E + A M T+ + LY E+ R D +A A +A Sbjct: 119 LALLLQAQAAQLEGDRDGARRAFLAMAGRDDTKSLGMRGLYIEAQRANDPQAALAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 L + P+A W ++AV+ +W+ A+ L + K + R RA+LL AR+L+ Sbjct: 179 LRLQPNAAWASQAVLGFRCARADWTGALEILETNLSSGLVDKKAFRRQRAVLLTARALDV 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D D S A+E+ KL + A++ AAK L ++ R+A +LE W+ PHP++A Sbjct: 239 ED-SDQSLSRDSALEANKLAPTLVPAAVLAAKCLAETHQVRRAMKVLETAWQAEPHPDLA 297 Query: 297 NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y H+ + +L R L ES + +++ A++ G +A + Sbjct: 298 EAYAHIKPGDPPATRLARIENLIGKKATDFESALALARAAIDAGEFSKARLALQPYLD-N 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + +L+A+IE +T K WT A+ A+PDP+W + DGY+S W P+SP+S L Sbjct: 357 PTQRVAMLMAEIEHGERGDTAKARAWTLRAVRALPDPVWTA-DGYISDHWRPVSPVSGRL 415 Query: 416 CYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTI 474 F+W++P + P + + A A L K + + +D+ + Sbjct: 416 DAFQWQVPLAALPAKKTVVIEDNPFHDALIASSAPEALPPAKADAAVMVTVEPVADDAIV 475 Query: 475 HPLDPHI 481 P P Sbjct: 476 TPKQPEA 482 >gi|220924339|ref|YP_002499641.1| HemY domain-containing protein [Methylobacterium nodulans ORS 2060] gi|219948946|gb|ACL59338.1| HemY domain protein [Methylobacterium nodulans ORS 2060] Length = 507 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 115/466 (24%), Positives = 211/466 (45%), Gaps = 10/466 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++TW TS L + F ++A Sbjct: 1 MWRALAFLALLAIAAYGAVWLADHPGVVTVTWSGYEVATSLAAALVGVLIFAVILGFVWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 +R L P L R +GY+AL G++++ + + AR+ + +E Sbjct: 61 FTRGILRFPHRLRVRNRARRRARGYEALSRGMVAVGSGDPAAARRHAGEAA--RLLGDEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A A M + P TR + L+ E+ R GD +A+ YA +A Sbjct: 119 LALLLKAQAAQISGDRAGAENAFRRMTEEPETRVLGLRGLFVEARRQGDEATARAYAAEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLEN 236 ++P W EAV++ ++W+ A+ ++++ + R RA+LL A +LE Sbjct: 179 ARLAPGVSWANEAVLEAQCADRDWNNALETVSRRASLGIADKTAARRQRAVLLTASALE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + GD + A E++KL + + A+ A + + ++A ++E WK +PHP++A Sbjct: 238 LEAGDPERALAQAREAVKLAPDLVPAAAVAGRLFARRADLKRAARVVEAAWKASPHPDLA 297 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y L +++ +L RA L ++ ES +++ ALE +A + Sbjct: 298 RVYLDLRPGDSSRDRLARAETLARLSSWHPESRFAIARAALEAREFGRARDVLSPLLADN 357 Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + ++L++A+IE+A + + W A HA DP W DG +S W P+SP+S Sbjct: 358 PTQRVYLMMAEIEEAEHGRGSGRAREWLARAAHAPRDPAW-CADGIVSDRWAPVSPVSGR 416 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHL 460 L F W+ P + S E E++ P ++ Sbjct: 417 LDAFVWQTPPELLGRSSREVPPEEKEVSEPGPLPAPGPAVKEEKPA 462 >gi|182678175|ref|YP_001832321.1| HemY domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634058|gb|ACB94832.1| HemY domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 493 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 121/491 (24%), Positives = 214/491 (43%), Gaps = 23/491 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + +I+ + + P +TW TS V +++L L Sbjct: 1 MLRVLLFLCLIAALALGAAWIGEQPGHFLMTWQGYQVETSAPVAITLLGVSAAILALALW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L+ P R +KGY AL G+++ A + +A K + + Q + Sbjct: 61 LLVTILNLPKTFARWRETRLKNKGYAALSRGIVAAGAGDTHVANK--AALDAQKYLPKDP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV +LE Q A + A + +M + P R + LY E+ R D +A +A +A Sbjct: 119 LVLVLEAQAAQLAGDRSRAQDAFRLMGERPEMRLLGLRGLYAEALRNDDSEAAYHFAHEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLEN 236 + P PW +AV+ +++ A++W A L N + + R AIL A + E Sbjct: 179 HKVHP-LPWSAKAVLDEHIRAQDWEGAFGILGKQINAQLVDKATGERQCAILETAMAQEK 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + ++LK + + A + A +N R+A ++E+ W HP+IA Sbjct: 238 -ELSAPDEALRLGRQALKHAPDLVPAIVLVAHLWGRKNDVRRAAKLIEREWPNIQHPDIA 296 Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMK 353 Y L ++ + +L+RA RL + S ES + V+ A+ A + +LA + Sbjct: 297 LAYLDLRPGDSNMDRLRRAQRLARLAPGSAESRLSVAGAAIAARQFALARETMRELLAKE 356 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 P + L+A++E+ S + + W A A D W++ DG++S WLP SP++ Sbjct: 357 KTPTVRMCQLMAELEETESGFSGSVREWLAKASRAPRDETWVA-DGFVSPKWLPASPVTG 415 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 L F W+ P E + +L+ A ++ +L+ +K+ + KK + E Sbjct: 416 QLDAFRWQRPV--------ERLVVTLDNAEAVEETALLLSEEEKHGADTSKKAAVQE--- 464 Query: 474 IHPLDPHIRQP 484 I P QP Sbjct: 465 ILPPAEASTQP 475 >gi|154245109|ref|YP_001416067.1| HemY domain-containing protein [Xanthobacter autotrophicus Py2] gi|154159194|gb|ABS66410.1| HemY domain protein [Xanthobacter autotrophicus Py2] Length = 567 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 107/450 (23%), Positives = 210/450 (46%), Gaps = 10/450 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + ++ + ++ P +V++ W Y T+ V L+++ ++L+ Sbjct: 1 MIRLVLFLLLLVAITFGVSWLADRPGEVTVVWEGVAYGTTVPVALAVIAVVAGLILILWR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P ++ +R +KG+ A+ GL+++ + A + +E Sbjct: 61 ILSLLVRSPKIIAAFSRRRRREKGWNAVTRGLLAVGIGDN--AAVRQARHDAARLLPHEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L +LL Q A + ++ +A M+ P TR + L+ E+ + GD +A A +A Sbjct: 119 LTHLLTAQAAQLDGKHEVAVAAFRAMVDKPETRLLGLRGLHMEARKAGDKVAAYAIAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 +P W +AV++ A +++ A L ++ + ++ R +A+LL A ++ Sbjct: 179 ASAAPTLGWAADAVIEARCAAGDYAGARGVLERQMALKGIDKAQYRRRKAVLLAAEAIA- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D + + A+E+++L + A+ CA + L + + RKA ++E + NPHPE+A Sbjct: 238 LEHSDPLVAREKAVEAVRLAPTLVPAAACAGRLLGAAGELRKAAKVVETAFATNPHPELA 297 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ +L + +LKR L ES + +S+ A++ QA + Sbjct: 298 DVEAYLRPGDAAQDRLKRIRTLVNRAPSHRESAIALSRAAIDAHEFRQARLVLEPLL-AE 356 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 P + + LL+A++E A + K WT A+ A DP WI+ DG +S W +SP+S L Sbjct: 357 PSQRVCLLMAELEAAEHADIGKAREWTARAVRAHRDPAWIA-DGVVSDAWAAVSPVSGKL 415 Query: 416 CYFEWKIPTKSPEYISSENINFSLEMAYPA 445 F W++P E+ ++ A A Sbjct: 416 DAFVWEVPPGVSATPILEHEAERVKAAIAA 445 >gi|170748490|ref|YP_001754750.1| HemY domain-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170655012|gb|ACB24067.1| HemY domain protein [Methylobacterium radiotolerans JCM 2831] Length = 536 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 110/479 (22%), Positives = 205/479 (42%), Gaps = 14/479 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + +++L + ++ P V++ W TS V L + LL+A Sbjct: 1 MWRALAFLALLALAAFGAVWIADRPGTVTVVWNGYQIGTSLAVALVGVIAAAIVLGLLWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P L +R KG AL G++++ + + AR+ + E Sbjct: 61 IVRGVIGLPEALVRGSAERRRAKGLSALSRGMVAVGSGDPLAARRYAG--DAERLLGTEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A + A + M+ P TR + L+ E+ R D +A+ YAT+A Sbjct: 119 LTLLLKAQAAQISGDRDAAESAFQRMVDDPETRVLGLRGLFVEARRREDETAARAYATEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 ++P W EA+++ +W+ A+ + ++ + R RA+LL A + E Sbjct: 179 ARLAPSVTWANEALLEAQSADGDWAAALETIERRSSLGLIDKAAARRQRAVLLTAIAGER 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G+ + ++++KL + + A+ A + L + +KA I+E WK NPHP++A Sbjct: 239 -EAGEPELATERVLQAVKLAPDLVPAACIAGRLLARRGDVKKAARIVEAAWKANPHPDLA 297 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y L ++V +L RA L +++ ES + + + AL+ +A + Sbjct: 298 KVYLGLRPGDSVRDRLARAEVLAKLSVWDPESRLALGQAALDARDYKRAREAVKPLLSDR 357 Query: 356 PRKEIFLLLAQIEQANSHN-TDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P L++A IE+A + + W A A D +WI+ DG + W P+SP++ Sbjct: 358 PTARACLMMAAIEEAEHGAASGQAREWLARAARAPRDRVWIA-DGIATDTWAPVSPVTGR 416 Query: 415 LCYFEWKIPT----KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469 L F W+ P +P + + + + + P+ Sbjct: 417 LDAFAWREPPNTLGAAPAVEPEADAAGPALVPAAPNAAAPVAKPTPASKSPAATTSPPA 475 >gi|288957242|ref|YP_003447583.1| hypothetical protein AZL_004010 [Azospirillum sp. B510] gi|288909550|dbj|BAI71039.1| hypothetical protein AZL_004010 [Azospirillum sp. B510] Length = 449 Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats. Identities = 110/445 (24%), Positives = 199/445 (44%), Gaps = 8/445 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R + + +++VI I ++ P VS+ W +V L +L L L + Sbjct: 1 MIRALWFLLKLAVVIAIAIWLADRPGSVSVHWLGYAVEAPFWVALLVLLAALGLAALGYR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + P L R ++GY+AL G+++IAA + P ARKM + Sbjct: 61 LLRGTIRLPQRLRRHSRARRRERGYRALTQGMVAIAAGDAPTARKMARKAD--VLLNEPP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A + A + ML+ P T + L ++ + GD A A KA Sbjct: 119 LTMLLSAQAAQLQGDERAAKQYFTAMLERPETAFLGMRGLLTQAIKSGDRVEALTLARKA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236 + P+ PW+ + A +W+ A L Q + E R+R +LL+ RS E Sbjct: 179 RGLQPNTPWLLGTLYDLEARAGDWAAAEGTLQQAIQAGAMPTEEGRRHRVVLLLERSFEA 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +G A+ A + L A++ A+ ++ ++ + A ++E+ W+ PHPE+A Sbjct: 239 ERRGRADAALSHAQAAHDLMPGFAPAAVRLARLQVAADRLKPAAKVVERAWRHEPHPELA 298 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +IY ++ S + + +++ +L +S ES + V++ A++ +A AM+I Sbjct: 299 DIYGTIVASYDALTRVRLFQKLVRQAPDSAESHLAVARAAIDAQLWGEARQHLERAMEIG 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKT 414 P + + L+A +++ H+ + W A +A DP+W G +S W L Sbjct: 359 PTRRTYRLMAALDRGERHDEEVAKDWLAKAANAPEDPVWTCGSCGAVSHNWGGLCGHCGA 418 Query: 415 LCYFEWKIPTKSPEYISSENINFSL 439 WK PT + + + ++ +L Sbjct: 419 FDSLSWKAPTVAVPLMEATDLPPAL 443 >gi|170742656|ref|YP_001771311.1| HemY domain-containing protein [Methylobacterium sp. 4-46] gi|168196930|gb|ACA18877.1| HemY domain protein [Methylobacterium sp. 4-46] Length = 528 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 112/446 (25%), Positives = 210/446 (47%), Gaps = 13/446 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + +++L + ++ +P VS++WG TS L + L++ Sbjct: 1 MWRALAFLALLALAAYGAVWLADHPGVVSVSWGGVDVATSLNAALVGVLVLAVVLGFLWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 ++R L P + H+R +G++AL G++++ + + AR+ + +E Sbjct: 61 LARGVLRLPRRMRASSHERRRTRGFEALSRGMVAVGSGDPAAARRHAGEA--ERLLGSEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A A M + TR + L+ E+ R GD +A+ YA +A Sbjct: 119 LALLLTAQAAQISGDRAGAERAFRRMTEASETRVLGLRGLFVEARRQGDEATARAYAAEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 ++P W EAV++ ++W+ A+ ++++ + R RA+LL A + E Sbjct: 179 SRLAPGVSWANEAVMEAQCADRDWAGALETVSRRAALGLADKAASRRQRAVLLTASAQE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + GD + A E+++L + + A++ A + L + + +KA ++E WK PHP++A Sbjct: 238 LEAGDPERALAQAREAVRLAPDLVPAAVVAGRLLSRRAELKKAARVIEAAWKAGPHPDLA 297 Query: 297 NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y L +++ +L RA L ++ E+ +++ ALE +A + + Sbjct: 298 RVYLDLRPGDSSRDRLARAETLARLSSWHPEARFAIARAALEAREFGRARDVLQPLLAES 357 Query: 356 PRKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT 414 P + +LL+A+IE+ + + W A HA DP W DG +S W P+SP+S Sbjct: 358 PTQRAYLLMAEIEETEHGRGSGRAREWLSRAAHAPRDPAW-CADGIVSDRWAPISPVSGR 416 Query: 415 LCYFEWKIPTKSPEYISSENINFSLE 440 L F W+ P PE ++ + + L Sbjct: 417 LDAFVWQTP---PELLAGRSQDLPLP 439 >gi|296444989|ref|ZP_06886950.1| HemY domain protein [Methylosinus trichosporium OB3b] gi|296257410|gb|EFH04476.1| HemY domain protein [Methylosinus trichosporium OB3b] Length = 466 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 13/453 (2%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 + +P +++ WG TS V ++ + I+ +A+ F P L R Sbjct: 20 WMLEHPGSITLDWGGYHIETSLLVAIAATLGLIALVIIAWAILVSFFQAPTRLAQSSRSR 79 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 +KG++AL G+++ A ++ A+K + E L +LL+ Q+A E A Sbjct: 80 RREKGFQALSRGIIAAGAGHVGAAKKASKEA--EKCLAKEPLTFLLKAQVAQLEGDRVGA 137 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 M + TR + L+ E+ R D +A +A +A ++P PW A+++ + Sbjct: 138 ETAFHEMTLLSETRLLGLRGLHIEAKRRNDAEAAHLFADQAHQLAP-VPWAGHALLEHHG 196 Query: 200 LAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +W A + K R RA++ A ++E + H A +++K Sbjct: 197 SNADWEEARVAIEANLKAKAIDLPTAQRLRAVVETALAMEKQVDS-PSEALHLARQAVKR 255 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRA 314 + A + L KA +LEK + NPHP+I Y E+ +L R Sbjct: 256 APTLVPAIALIGRLLARHGDSAKALKLLEKAYAENPHPDIVAAYLDASPSESNAERLARV 315 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQANS 372 +L ++ ES VIV++ AL A + AP +I LL+A++E A + Sbjct: 316 KKLALAAPKAPESGVIVARAALAARDFAMARRALAPLVAEGQAPTAQICLLMAEVEDAEN 375 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISS 432 + + W A DP WI+ DG +S W P SP++ L F W P + P + Sbjct: 376 GPSGPVREWLARGSRAPRDPAWIA-DGVISRSWAPASPVTGKLDAFVWTTPPE-PIRGPA 433 Query: 433 ENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 E+ + A+ + +L + + + Sbjct: 434 EDARAGIPAAFLTTRQERLLEAAEIDADSGAAE 466 >gi|218672801|ref|ZP_03522470.1| hypothetical protein RetlG_14767 [Rhizobium etli GR56] Length = 382 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 131/369 (35%), Positives = 200/369 (54%), Gaps = 6/369 (1%) Query: 15 ICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFH 74 F + P D+S+ W ++Y+T V +S + + A ++++ R + P + Sbjct: 15 AYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWWFVRLIWTSPHSVTR 74 Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 R D+GY+AL TGL++ A N LARKM + E L+ LLE Q AL E Sbjct: 75 YFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEG 134 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +++ A K E M P TRE + LY E+ R+G +A++YA KA D +P PW +A Sbjct: 135 RHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQAT 194 Query: 195 VQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ A W AI L Q+K E NR A+LL AR+ E + G+ + DA+ Sbjct: 195 LEYRSQAGRWDDAIRLLEQQKAARVVEKTEANRLHAVLLTARAGEKLE-GNPAGARDDAL 253 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVG 309 ++LKL + + A++ AAK+L + RKA ILE+ WK PHPEI Y ++T+ Sbjct: 254 QALKLAADFVPAALIAAKALFREGGLRKAASILEQAWKSAPHPEIGQTYVRARSGDSTLD 313 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 +LKRA RLE + +VESL++V++ AL+ +A KA A +I PR+ FLLLA IE+ Sbjct: 314 RLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARTKAEAAARIEPREAAFLLLADIEE 373 Query: 370 ANSHNTDKI 378 A + + ++ Sbjct: 374 AETGDQGRV 382 >gi|298292771|ref|YP_003694710.1| HemY domain protein [Starkeya novella DSM 506] gi|296929282|gb|ADH90091.1| HemY domain protein [Starkeya novella DSM 506] Length = 526 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 116/498 (23%), Positives = 221/498 (44%), Gaps = 18/498 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ Y V++L+ ++ P ++I W TS V S L L A ILL+ Sbjct: 1 MIRLVVYLLVLALIAFGVAWLADRPGSIAIDWQGWQIETSILVAASALLALLAATILLWT 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P ++ R ++G+ A+ GL+++ + + AR+ + + +E Sbjct: 61 LLRLIFRSPELIAFSWRSRRRNRGWAAVTRGLVAVGSGDALGARR--AANDAERLLGHEP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A + A M + P+TR + L+ E+ R GD +A A +A Sbjct: 119 LTRLLAAQAAQLAGDRDGAEAAFRAMSETPSTRLLGLRGLHVEARRRGDAAAALLSAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENA 237 + P W +AV++ L +++ A+ L ++ + + +R R +L+A + Sbjct: 179 ARVEPGLAWAADAVIEARCLNGDFAGALATLEREAAHGGLERAAHRRRRAVLLAAQAQAL 238 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + D + A+E+ +L + A+ A + L + RKA I+E + PHP++A+ Sbjct: 239 ELSDPSTAREKAVEATRLAPTLVPAAEVAGRLLGASGDTRKAAKIIEAAYAATPHPDLAD 298 Query: 298 IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + HL +++ +LKR L ES +++++ A++ D A + P Sbjct: 299 AFLHLRPGDSSQERLKRIRTLTARMPSHPESAMVLARAAIDAQEFDVARTALGPLLG-EP 357 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLC 416 + LL+A++E A + K WT A+ A DP W++ DG ++ W P+SP++ L Sbjct: 358 TQRACLLMAELEAAEHGDVGKAREWTARAVRAARDPAWVA-DGVVAERWAPVSPVTGKLD 416 Query: 417 YFEWKIPT----------KSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466 FEWK+P ++ ++ A A+ +++ + PS+ Sbjct: 417 AFEWKLPPGVATTPMLENEAERVKAAIAAAIEARPAAEAEPEPPVVDLTPEEPAPSLAPE 476 Query: 467 SSFEDSTIHPLDPHIRQP 484 + ++ +P Sbjct: 477 AEVKEPAKPEAIRPAPKP 494 >gi|154251805|ref|YP_001412629.1| HemY domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154155755|gb|ABS62972.1| HemY domain protein [Parvibaculum lavamentivorans DS-1] Length = 512 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 112/489 (22%), Positives = 195/489 (39%), Gaps = 24/489 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR + F +++++ I ++ P D+ + W RTS V + ++ F +L + Sbjct: 1 MLRALYIFLIVAVLSGIAIWLADNPGDLIMHWRGYEIRTSFVVGVGVMALAAFLVLLAYR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F+ PA + L KR KG+ AL G++++AA + A++ + + Sbjct: 61 IIVSFIETPASVSAYLEKRRQQKGFLALSRGMVAVAAGDAADAKRYAAQAHK--LLDAPP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A E A E ML P T + L+ ++ R GD + A +A +A Sbjct: 119 LTLLLAAQAAQLEGNEAAATAYFEQMLAAPETEFLGLRGLFIQARRAGDRDGALAHARRA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLI------ 230 ++ P PW +AV + ++W A+ L++ K E R RA+LL Sbjct: 179 FNLRPQTPWAAQAVFEIEAAEEDWDAALETLDRVVSAKLIPRDEARRRRAVLLTARAMTA 238 Query: 231 ----ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + ++E++ L A AA+ + RK ++E Sbjct: 239 AEAAYGQVGEGRTSALEKATKLSLEAVSLEPKFPPAVALAARLCGETGRARKGMKLIEDA 298 Query: 287 WKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 W PHP++A+++ + E+ + RA L N + +ES ++V++ A+ A Sbjct: 299 WSDAPHPDLADVWLDMIEGESGYDRATRARVLASRNVDHIESRILVARGAIGARDWAAAR 358 Query: 346 AKA----MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL 401 K P + I L+A+IE+ + W ALHA DP W GY Sbjct: 359 EALVPYTGAEAKEVPTQCICELMAEIEEGEFGDRGASRSWLTRALHAPADPQWT-GTGYR 417 Query: 402 SSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLP 461 S W P++P++ EW P P + Sbjct: 418 SPRWSPVNPVTGEFDALEWSAPL--PMLGRETAAVEPAPAKSTPEPAPVQSAERSIAARE 475 Query: 462 SIKKVSSFE 470 K ++ E Sbjct: 476 EHKSTAAGE 484 >gi|209965650|ref|YP_002298565.1| HemY domain protein [Rhodospirillum centenum SW] gi|209959116|gb|ACI99752.1| HemY domain protein [Rhodospirillum centenum SW] Length = 472 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 98/469 (20%), Positives = 185/469 (39%), Gaps = 14/469 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + +F I L+I I ++ P VSI + + + + +L L + A ++L+ Sbjct: 1 MRRAVFFFIKIGLLIALAIWLARNPGSVSIQFQDWMVDMPFWAMLLALAVIIVASVVLYR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V F + PA ++GY AL G++++AA + A + + Sbjct: 61 VFSFVVGGPAAFARSRQAAKRERGYHALTQGMVAVAAGDREAASRFARKADT--LLNEPP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A A + + MLQ P T + L ++ + GD A + A +A Sbjct: 119 LTLLLSAQAAQLAGDDMAARKYFQSMLQRPETEFLGLRGLLTQALKGGDRTEALKLARRA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236 +I P A W A+++ W +A L++ R+R LL+ R+ Sbjct: 179 AEIQPKAQWPVLALMELEAKEGHWKQAEEALDRATATKALPQETLRRHRVALLVERARTA 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +G + A + + + + A++ A ++ A +E+ WK+ PHPE+A Sbjct: 239 VAEGRSKDALALAQRANEQMPSHVPAAVLVATLRAQAGNRKAATRAIEEAWKIAPHPELA 298 Query: 297 NIYTHLL-----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + + +KR L ++ + + V + + L DQA A Sbjct: 299 EAWGRIEAIFRPGIDPASLVKRYEALVALDPRAAAAYVALGEACLRADLRDQARTHLEKA 358 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS--ALHAMPDPLWIS-DDGYLSSVWLPL 408 +AP + +F LL ++ + + + + W + LH PDP+W+ G ++ W + Sbjct: 359 WTLAPTQHVFRLLTELARHEDGDGEAMREWLERSAGLHPDPDPVWVCSACGTPAAGWSAV 418 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKK 457 P + EW+ + + + PA + Sbjct: 419 CPSCRGFDTMEWRAAKPALRLADTAPAAILPAASRPAPATTTPDTPAAG 467 >gi|323135815|ref|ZP_08070898.1| HemY domain protein [Methylocystis sp. ATCC 49242] gi|322398906|gb|EFY01425.1| HemY domain protein [Methylocystis sp. ATCC 49242] Length = 464 Score = 348 bits (894), Expect = 8e-94, Method: Composition-based stats. Identities = 100/431 (23%), Positives = 187/431 (43%), Gaps = 12/431 (2%) Query: 13 LVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAML 72 +V + P +++ + S V ++ L + I+++A+ + P + Sbjct: 13 VVALGLEWLIEQPGSLTLEFAGWHMEASIPVAVAGLLLLIATVIVVWAIVVALIRLPRRM 72 Query: 73 FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA 132 +R ++G + GL+++ A ++ + + E L +L Q A Sbjct: 73 AGGSRERRRERGLDVISQGLVAVGAGDLAR--ARKAAALAERLLPGEPLTQMLNAQAAQL 130 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A + M P T+ + L+ E+ R D +A +A A +I+P PW Sbjct: 131 SGDHQAAAKAFHKMTLKPETKLLGLRGLHIEAKRRQDAEAAHHFAKAAHEIAP-LPWAGS 189 Query: 193 AVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 AV++ + +W +A + +A RA++ A ++E + + Sbjct: 190 AVLEHHAAGGDWEKARAAVEANLAAKAIDAATAQNLRAVIETAMAMEKERE-HPHDALRL 248 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENT 307 A ++LK A+ AA+ LI +++A ++E +W PHP++A +Y L E+ Sbjct: 249 ARQALKRRPGFPPAAATAARVLIHHGDRKQALKLIETVWATKPHPDLAEVYFEALPDESN 308 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML--AMKIAPRKEIFLLLA 365 ++ R +L + ++ ES I+++ AL +A A P LL+A Sbjct: 309 SQRVARIEKLARLAPDAPESRHILAQAALSARDFTKAREALAPLVAAGQHPTAHTCLLMA 368 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTK 425 +IE A + + + W A DP WI+ DG +S WLP+SP+S L FEWKIP Sbjct: 369 EIEDAQNGPSGPVREWLARGSRAPRDPAWIA-DGVVSKHWLPISPVSGKLDAFEWKIPPH 427 Query: 426 SPEYISSENIN 436 S ++++ E Sbjct: 428 SAQHLTEEGQP 438 >gi|163797972|ref|ZP_02191914.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium BAL199] gi|159176766|gb|EDP61337.1| Uncharacterized enzyme of heme biosynthesis [alpha proteobacterium BAL199] Length = 456 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 85/455 (18%), Positives = 164/455 (36%), Gaps = 8/455 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R Y +++++ I + P D+ I W + + I + + Sbjct: 1 MRRSFLYIIRLAILVALAIWLVRNPGDIRIDWIGWRLEMPFALFMVITVAVTWVAGIGLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 ++ L P + + + G++AL GL +IAA + AR+ + Sbjct: 61 MAAGALGAPWAVMRRRADQRRESGFRALTLGLAAIAAGDAEEARRQAREAD--RLLRDPS 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q A A + T + L ++ GD + A +A Sbjct: 119 LTRLLSAQAAALNGDTAAAARYFAALRDNEDTAFLGIVGLLRQALARGDEARSLELAEEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 + PDAP V + A+ W A L K ++ R+R+ LL R+ E Sbjct: 179 YAMRPDAPLVATTRLYGRARARRWFDAQVALYDAVKRRIVPEEDGRRHRSALLTERAREA 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + A ++ + + A A+ L K ++ + ++E+ W +PHP + Sbjct: 239 LAADKLDEALEFAGKARESVPGFVPAVALEAELLGRTGKAKRGQRLIEEAWPKSPHPALT 298 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y L++E + + KR L + + ES + +++ AL+ +A + Sbjct: 299 EAYRGLVTETNLIDRFKRLHALADHAVDHPESRMTIAEAALDAELWGEARVQLEALTGSD 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKT 414 L A++E A + W + + A DP W G ++ W + Sbjct: 359 LTARACRLRARLEDAEHGDDRAARLWLERSGSAPADPAWTCGSCGAVAPDWSAVCGHCGE 418 Query: 415 LCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQ 449 W +P + S + + +++ L Sbjct: 419 FDTVAWTLPPRVSVLSSDDVADLEVDVVEMPHSLP 453 >gi|218662368|ref|ZP_03518298.1| hypothetical conserved membrane protein [Rhizobium etli IE4771] Length = 428 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 121/356 (33%), Positives = 185/356 (51%), Gaps = 7/356 (1%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 + E L+ +++ L E +++ A K E M P TRE + LY E+ R+ Sbjct: 1 ARSRGLIRADQEPLINCSRLRVRLMEGRHDEARAKFEAMANDPETRELGLRGLYLEARRL 60 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNR 223 G +A++YA KA D +P PW +A ++ A W AI L Q+K E NR Sbjct: 61 GANEAARQYAEKAADNAPYLPWAAQATLEYRSQAGNWDDAIRLLEQQKAARVVEKTEANR 120 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+LL AR+ E + G+ + DA+++LKL + A++ AAK+L +N RKA IL Sbjct: 121 LHAVLLTARAGERLE-GNPAGARDDALQALKLAAGLVPAALIAAKALFRENGLRKAASIL 179 Query: 284 EKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 E+ WK PHPEI Y ++T+ +LKRA RLE + +VESL++V++ AL+ Sbjct: 180 EQAWKSAPHPEIGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFA 239 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402 +A AKA A +I PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S Sbjct: 240 KARAKAEAAARIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVS 298 Query: 403 SVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458 WLP+SP++ + FEWK P E + + + Sbjct: 299 DKWLPVSPVTGRIDAFEWKAPFGQIEGRLEDGSAPAAIETALKTLPPLRDVRPESP 354 >gi|83313522|ref|YP_423786.1| hypothetical protein amb4423 [Magnetospirillum magneticum AMB-1] gi|82948363|dbj|BAE53227.1| Uncharacterized enzyme of heme biosynthesis [Magnetospirillum magneticum AMB-1] Length = 426 Score = 311 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 91/428 (21%), Positives = 169/428 (39%), Gaps = 9/428 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + + L + + ++ P +V+I W T+ V+L++L L LL Sbjct: 1 MRRFLVFVVLTGLAVAGAVWLADRPGEVTIRWQGWRLDTTVPVLLAVLALLLVGLSLLAR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P KGY AL GL + A+ + A K+ + + Sbjct: 61 LVRAVFGAPGRWLQSRRLGRQRKGYMALSDGLAAAASGDAARAAKLSRKADK--LLKDPA 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + LL Q A + ++ M T L + + GD A+ A +A Sbjct: 119 VTALLTTQAAQLGGDADQLRDRFRAMTGRKETAFLGHKGLAELALKSGDRAIARDEAARA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 ++ P A + ++ +V A W+ A L +++ ++ R A++L+ R+ E Sbjct: 179 FELQPMAADLAVQLLDLHVEAGAWAEAEQVLRLARRHGAVSEADFPRRHALILLGRAEEA 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 GD + A ++ A AA L + K RKA +L+ +K +PHP + Sbjct: 239 LRAGDESLALDWAQDARDADPLFTPAITLAADLLRRRGKGRKAASLLKAAFKAHPHPLLI 298 Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + L E+ + ++K L + N + E + +++ AL+ A A + Sbjct: 299 TEWRKLGDGESALDRVKSLQELAQANPGAPEGHMALAEAALDAQLWGLARTHLAKAQEQR 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWIS-DDGYLSSVWLPLSPISK 413 P + +F LLA++E+ + WT A ++P+ W G+ + + P Sbjct: 359 PTRAVFALLARVERDERKDEAAANAWTLKAATDSVPESSWTCGGCGHQTPDFALSCPACG 418 Query: 414 TLCYFEWK 421 EW Sbjct: 419 AAGRLEWT 426 >gi|46201304|ref|ZP_00208051.1| hypothetical protein Magn03009978 [Magnetospirillum magnetotacticum MS-1] Length = 426 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 103/428 (24%), Positives = 176/428 (41%), Gaps = 9/428 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + + L + + ++ P +V+I W TS V+L++L L A +L Sbjct: 1 MRRFLAFLVLTGLAVAGAVWLADRPGEVTIRWQGWRADTSVPVLLAVLALLLLALSVLIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P L KGY AL GL + A+ AR H+ Sbjct: 61 LIRLVFGAPKRWLAALRLSRQRKGYAALSDGLAAAAS--GDAARAAKLARKADKLLHDPA 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + LL Q A + E+ M + T L + + GD +A+ A KA Sbjct: 119 ITGLLSSQAARLSGDDHQLAERFRAMTERKETAFLGHQGLAELAVKAGDRTTARAEAAKA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLEN 236 DISP AP ++ ++ ++ A W+ A +++ ++ R RA++L+ R+ ++ Sbjct: 179 FDISPTAPDLSVLLLDLHMEAGAWAEAEQVARLARRHGSLSEADFTRRRALILLGRAEDS 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 GD + A +S A AA L + K RKA +L+ +K + HP + Sbjct: 239 MAAGDEAQALDWAQDSRDADPQFTPAVALAADLLRRRGKGRKAASLLKSAFKTHAHPLLI 298 Query: 297 NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + L E+ + ++KR L + N S E V +++ AL A + A+ Sbjct: 299 AKWLTLGEGESALDRVKRLQDLSQANPASPEGHVALAEAALAAQLWGLARSHLEKALTQR 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHAMPDPLWIS-DDGYLSSVWLPLSPISK 413 P + +F LLAQ+E+ + W A ++P+P W+ G+ S + P Sbjct: 359 PTRTVFQLLAQVERDERKDETAAHGWLMKAGTDSVPEPAWVCGGCGHHSPDFALCCPACG 418 Query: 414 TLCYFEWK 421 EW Sbjct: 419 AAGRLEWT 426 >gi|304320180|ref|YP_003853823.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis HTCC2503] gi|303299083|gb|ADM08682.1| hypothetical protein PB2503_03027 [Parvularcula bermudensis HTCC2503] Length = 512 Score = 300 bits (768), Expect = 4e-79, Method: Composition-based stats. Identities = 91/486 (18%), Positives = 189/486 (38%), Gaps = 22/486 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ + +I+++ + ++ I +G+ V+ I Sbjct: 1 MIRILVFLTIIAVLAAAITGLASVEGFAVIRFGDTNITARSSVLFGAALIGAVLLICATL 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT--FHN 118 + + P+ + +R ++G AL GL ++AA + A+++ +Q + Sbjct: 61 ILSGIVRLPSSIRRQRAERRRERGLIALTRGLEAVAAGDASDAQRLARTAQKQLGQQGNE 120 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L LL Q A A + MLQ P T + LY ++ GD A++YA Sbjct: 121 AGLSRLLTAQAAQLAGDEETAQQSFAAMLQAPETEFLGLRGLYLQAMASGDRKEARQYAE 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSL 234 +A + P A W ++V + W A L + +++ + R A LL A + Sbjct: 181 RAFKLRPGASWAFQSVYALQLERGAWGEARDALLKAQQHGLEKGEPSRRREAALLTAMAY 240 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 D + +A E+L+ A++ AA+ ++ +A +L++ W ++PHP Sbjct: 241 GAEAAEDTDTAIKEAEEALRKAPGFAPAAVLAAELETKAGRRSRAGKLLDEAWAISPHPA 300 Query: 295 IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A + + E + R + L E+ ES +++++ +G +A A+ + Sbjct: 301 LAKTMDEIYAKEKLERRTDRLIALANKRPEADESQLLIAEQENRLGKFTEAKARLEPLLT 360 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 PR F +A + ++ W A +A DP+ +D ++ Sbjct: 361 RNPRARTFSAMAAAVRGLYG-SEAAQIWLDRAANAPLDPVPGADGSFV------------ 407 Query: 414 TLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDST 473 W+ L++ + L+ + L ++++V++ E +T Sbjct: 408 -FTTDGWQR-LIREFGDHGRLAPPPLDVIRTSLTLEEVKLLSAPASLDTVQEVAADETAT 465 Query: 474 IHPLDP 479 P P Sbjct: 466 SAPSTP 471 >gi|83594895|ref|YP_428647.1| HemY-like [Rhodospirillum rubrum ATCC 11170] gi|83577809|gb|ABC24360.1| HemY-like [Rhodospirillum rubrum ATCC 11170] Length = 433 Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats. Identities = 87/407 (21%), Positives = 175/407 (42%), Gaps = 10/407 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR++ + + L++ + ++ +P V++ W TS V+L L + + Sbjct: 1 MLRILLFVLLAGLLVIGAVWIAEHPGIVALNWLGWHIETSIMVLLITLVVLIGLLLFFSR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 L P +++ +G A+ G+ + ++ LARK+ + Sbjct: 61 FFGGILGIPQWWRRRRNEKKLRRGSLAVGEGIAAARGGDVHLARKLLK--DAERLLPGAA 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L A A + ++A + +ML+ P T+ L + GDL+ A +A Sbjct: 119 GTQQLTADTAAAAGETDVAEKAYGLMLENPRTQASGRRGLLDLALTRGDLDKAYAIVREA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 + DAPW T + + +L ++W+ A + L + K + +A LL ++ + Sbjct: 179 VATGVDAPWATATLFRLQLLRRQWADAESTLAKAGNGVLKPGDDAKVVKAALLTVQARDA 238 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 G + + ++++L S A++ AA+ L + ++RKA +L +W +PHP +A Sbjct: 239 ELPGRGGDALRLSQQAVELDPTSREATLIAARQLAATGRQRKAAQLLIALWAKHPHPSLA 298 Query: 297 NIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y L E+++ ++ A L N E S + ++ AL+ +A ++ Sbjct: 299 QAYLALWTGEDSLKIVRHAQELTGANPEHPMSRRVFAEAALDAQLWGEARQSLEPLLRDV 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402 P I L+A++E+ + W + AL A P+ + +DG + Sbjct: 359 PSATICRLMARLEEGEKGDVTAANQWLRRALEAGPE---VEEDGVTA 402 >gi|254292446|ref|YP_003058469.1| HemY domain protein [Hirschia baltica ATCC 49814] gi|254040977|gb|ACT57772.1| HemY domain protein [Hirschia baltica ATCC 49814] Length = 495 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 87/418 (20%), Positives = 165/418 (39%), Gaps = 15/418 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61 +R++ V+ L I + + P+DVSI + Y S + ++ + + V Sbjct: 1 MRIVILLAVVILTIAAVTYAFNAPDDVSIAFNGAEYGMSRYTAGILVIVTGALVAVGWYV 60 Query: 62 SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH--NE 119 L P L + + K AL GL++ + A K + + Sbjct: 61 LSTILRIPFALNRSAKRARFGKARNALADGLIAAEGGDSIDALKKARKSTNLAKSDASDR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L YLL + A A ++ A + + + L + + GDL A+ + K Sbjct: 121 KLSYLLAARAAEANGDWSDAEHAYSDLSREKGAELVGLRGLAAAAIQRGDLRGAETHTRK 180 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLE 235 AL + +A W + + A +W A L +K + + R RA+L A++ Sbjct: 181 ALSLKSNASWPFSTLFELQTKAADWESANETLTIGEKRKSIDLEVARRRRAVLHTAQASR 240 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 K + A ++ ++ + A+ AA ++ K KA+ +E W++ PHP + Sbjct: 241 IRQKA-PEKAERLAADAARMAPSFPPAAYIAASLQLAAGKASKAQASIEGAWRIRPHPAL 299 Query: 296 ANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A ++ L +E T + KR L IN ES +++ + A+ G D+A ++ Sbjct: 300 ALLWRDLKTNEPTSARAKRLNALAHINPSHRESRILLVEAAMIQGQWDEAEETLSHVLRE 359 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW--ISDDG----YLSSVWL 406 + L+ I + ++ W++ A A + W I DG +++ W Sbjct: 360 GETTRLCTLMEAI-VGGRGDVEQASRWSRLASSAAREADWSDIDPDGRAFNFINEDWA 416 >gi|114568597|ref|YP_755277.1| HemY domain-containing protein [Maricaulis maris MCS10] gi|114339059|gb|ABI64339.1| HemY domain protein [Maricaulis maris MCS10] Length = 492 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 108/504 (21%), Positives = 189/504 (37%), Gaps = 37/504 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI L ++ P S + V ++ F ++++ Sbjct: 1 MIRLILAVAFALLTAVLGAFLALNPGHASFEFLGMQTEMPFVVAAGLVILLAFLMLVVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P + + +R ++GY AL L++ AA + A + + Sbjct: 61 GIYMLWTSPDKVKGFMGRRRREQGYDALEKALIASAAGDGEAAVRQAARADA--LLDRPA 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL + A + A E +L TR A L S GD + +A A Sbjct: 119 LSRLLAARAAESAGNLEGAQVHYEALLNDQKTRVVARRGLAQLSNERGDFAATIDHAGDA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLEN 236 + A W +A+ V W A+T L +K+ R R++LL A ++E Sbjct: 179 FQQAKGARWAFDALFDAQVAKARWRDALTTLTEGERRKQVAPDTARRRRSVLLTAAAVE- 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 A+ D + A+ + + A+ AA+ L + ++A +LE W PHP +A Sbjct: 238 AEGTDSENARELAVSAHRAAPGFAPAAALAARLLADGRRHKRASEVLESAWAAAPHPALA 297 Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-I 354 + L +T +L+R L +N + ES +++ +IALE G A A M Sbjct: 298 RAFQDLRKSDTKAKRLERLKTLAALNPDHRESHLVLIQIALEEGDAPAARALLDPMMDGT 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD------GYLSSVWLPL 408 P + L A++ + + + + W A HA D W D Y W Sbjct: 358 PPSSRLCALAARLARLDGKD-ELARRWMTRASHAGADADWSDIDPEGRLFAYTPDDWK-- 414 Query: 409 SPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSS 468 + + F + P Y E ++ ++ L + + + + +S Sbjct: 415 ----RMVYVFGDENRLTHPRYERFERAAGAVP--------ETALLDAPRPVRSASSRTTS 462 Query: 469 FEDSTIHPLDPHIRQPDDPGIKEQ 492 F ++T R PDDPG+ E+ Sbjct: 463 FAEATP-------RMPDDPGVPEE 479 >gi|58616804|ref|YP_196003.1| hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str. Gardel] gi|58416416|emb|CAI27529.1| Hypothetical protein ERGA_CDS_00770 [Ehrlichia ruminantium str. Gardel] Length = 413 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 91/433 (21%), Positives = 177/433 (40%), Gaps = 34/433 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS---PFVILSILYFFLFAWI- 56 M+ + F VI+L + + V I W N + I+++++ F+ I Sbjct: 1 MITSVLIFLVIALTVG--LWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIR 58 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L+F V + F C KR DK L G M + NI A K +++ H F Sbjct: 59 LVFYVCQCFYGC--------KKRRQDKRIILLDQGYMHLNCGNIEKADKC---ITKLHDF 107 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + L +LL+ + +Y +A + + +P + +I D + Sbjct: 108 DHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIEDQSKQLS 166 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARS 233 K L+I W ++ ++++W+ AI +++ K K ++ + ++ + Sbjct: 167 LFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYA 226 Query: 234 LENADKGDMIASYHDAI---ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 L A + Y D + +++K + + ++ A+ I+ NKKRKA +LE +++ Sbjct: 227 L--AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRI 284 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +PHP+IA++Y ++ ++ RL IN + S+ ++ + AL +G D A Sbjct: 285 SPHPDIAHLYLEIMHHDSQA----IHRLYNINSDYYFSIYLIVQDALNLGEYDLAMKHLN 340 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISDDGYLSS-VWLP 407 K ++ L+ ++ + + ++LYWT A A+ D W W Sbjct: 341 NVFKSRTYLSLYFLMLKL-KVLVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNY 399 Query: 408 LSPISKTLCYFEW 420 K W Sbjct: 400 ECDNCKGFNTIVW 412 >gi|57238815|ref|YP_179951.1| hypothetical protein Erum0840 [Ehrlichia ruminantium str. Welgevonden] gi|58578744|ref|YP_196956.1| hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str. Welgevonden] gi|57160894|emb|CAH57799.1| putative integral membrane protein [Ehrlichia ruminantium str. Welgevonden] gi|58417370|emb|CAI26574.1| Hypothetical protein ERWE_CDS_00800 [Ehrlichia ruminantium str. Welgevonden] Length = 413 Score = 278 bits (711), Expect = 2e-72, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 177/433 (40%), Gaps = 34/433 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTS---PFVILSILYFFLFAWI- 56 M+ + F VI+L + + V I W N + I+++++ F+ I Sbjct: 1 MITSVLIFLVIALTVG--LWAIDCDGIVRIEWLNYNIEINILFALCIIAVIFLFVILLIR 58 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L+F V + F C KR DK L G M + NI A K +++ H F Sbjct: 59 LVFYVCQCFYGC--------KKRRQDKRIILLDQGYMHLNCGNIEKADKC---ITKLHDF 107 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + L +LL+ + +Y +A + + +P + +I D + Sbjct: 108 DHPSL-FLLKGRFYFDSNKYTLAEKYFIQFSKVVPIIDATLGIHILNHIKQIEDQSKQLS 166 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARS 233 K L+I W ++ ++++W+ AI +++ K K ++ + ++ + Sbjct: 167 LFRKMLEIFYKQAWSPIFKLEICCISRDWNSAIEEMHKIIKLKINVPYDTQETLCILYYA 226 Query: 234 LENADKGDMIASYHDAI---ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 L A + Y D + +++K + + ++ A+ I+ NKKRKA +LE +++ Sbjct: 227 L--AKQYYTYQKYDDGLYVFDNMKHYSKHRTVITLLRAQLYINTNKKRKAIQLLESEYRI 284 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +PHP+IA++Y ++ ++ +L IN + S+ ++ + AL +G D A Sbjct: 285 SPHPDIAHLYLEIMHHDSQA----IHKLYNINSDYYFSIYLIVQDALNLGEYDVAMKHLN 340 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISDDGYLSS-VWLP 407 K ++ L+ ++ + + ++LYWT A A+ D W W Sbjct: 341 NVFKSRTYLSLYFLMLKL-KVLVQDYTELLYWTDKASKDAITDQHWQCKKCKCIPIHWNY 399 Query: 408 LSPISKTLCYFEW 420 K W Sbjct: 400 ECDNCKGFNTIVW 412 >gi|114329085|ref|YP_746242.1| hypothetical protein GbCGDNIH1_2421 [Granulibacter bethesdensis CGDNIH1] gi|114317259|gb|ABI63319.1| hypothetical secreted protein [Granulibacter bethesdensis CGDNIH1] Length = 434 Score = 274 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 85/428 (19%), Positives = 160/428 (37%), Gaps = 16/428 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRL-YRTSPFVILSILYFFLFAWILLF 59 M R+I+ ++V+ + V+ P V +T G+ L S + + + A LL Sbjct: 1 MRRIIKIVLPAAVVVAAAWYVAGLPGHVGMTVGDDLTIDMSVPAAIVAVVILVLAVHLLL 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 L P + R G A+ L+S+AA + A + + Sbjct: 61 RAVGAILGLPRTIRRWRQARTRQAGDYAVSRALVSLAAGDAGGAWREAGKARA--CLGDT 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL + A + + A + + + L E+ D SA A K Sbjct: 119 AQTLLLMAEAARLSGRESEATQAFHALTRTEDASFLGYRGLLREAITREDWTSAAELARK 178 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A P A W+ V + W A++ + + Sbjct: 179 AELAHPGAAWLRTERVNLAIRGGRWMDALSLAEN-----------DQQRAAFATAAAQAE 227 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 D A ++ +L + A+I A +L + ++R+++ +L K W +P P++A + Sbjct: 228 LDQAEKLRTARQAFRLDPSLTSAAIAYATTLRAAGRQRRSDAVLVKAWAAHPQPDLAVVA 287 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 ++ + + +++ RL N ES +++++ L G +A + A A ++ +K Sbjct: 288 LSGVT-DPLTRVRTVKRLVAGNPGHPESHLLLARENLAAGLTGEARSHAEQASRLIDQKR 346 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-DDGYLSSVWLPLSPISKTLCYF 418 ++LLLA IE+ + + A A PDP W G+ ++ W P T Sbjct: 347 VWLLLADIEEKEHGPGAAMQAALRRASEASPDPGWRCLHCGHATTHWAAACPACHTPGQI 406 Query: 419 EWKIPTKS 426 W P + Sbjct: 407 RWTTPGDA 414 >gi|218515793|ref|ZP_03512633.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3] Length = 364 Score = 270 bits (690), Expect = 5e-70, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 157/292 (53%), Gaps = 7/292 (2%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAI 227 +A++YA KA D +P PW +A ++ A W AI L Q+K E NR A+ Sbjct: 1 AARQYAEKAADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAV 60 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LL AR+ E + G+ + DA+++LKL + + A++ AAK+L + RKA ILE+ W Sbjct: 61 LLTARAAEKLE-GNPAGARDDALQALKLAADFVPAALIAAKALFREGGLRKAASILEQAW 119 Query: 288 KVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K PHPE+ Y ++T+ +LKRA RLE + +VESL++V++ AL+ +A A Sbjct: 120 KSAPHPEVGQTYVRARSGDSTLDRLKRAERLEALRPNNVESLLVVAQAALDAQEFAKARA 179 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406 KA A +I PR+ FLLLA IE+A + + ++ +W AL A DP W++ DG++S WL Sbjct: 180 KAEAAARIEPREAAFLLLADIEEAETGDQGRVRHWLAQALKAPRDPAWVA-DGFVSDKWL 238 Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKN 458 P+SP++ + FEWK P E + + + Sbjct: 239 PVSPVTGRIDAFEWKAPFGQIEGPLEDGSAPAAIETALKTLPPLRDVRPESP 290 >gi|83945092|ref|ZP_00957458.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii HTCC2633] gi|83851874|gb|EAP89729.1| hypothetical protein OA2633_10694 [Oceanicaulis alexandrii HTCC2633] Length = 487 Score = 262 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 102/502 (20%), Positives = 181/502 (36%), Gaps = 29/502 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL L + ++ P V++ + + + + + L F ++ + Sbjct: 1 MIRLTLTVIACVLTAMLAVFLTLNPGLVTVEFLGQTTQAPFALAMGALILAAFVLVVAWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V S P +R D+G+ AL L++ AA LA + + Sbjct: 61 VIAKLWSAPEAWKRFSLRRRRDQGFDALERALIASAAGQGDLAVR--QAARAEALLDRPA 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL + A A A E ML TR A L + D +A A Sbjct: 119 LSRLLAARAAEAAGDLESAQIHYEAMLADAKTRLVAQRGLVGIAQSRSDSQGLLTHAADA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLEN 236 + + A W +A+ + V W++A L + ++ R RA+LL A + Sbjct: 179 FEQAGRARWAFDALFEAQVNVALWAKAEATLTEGERRGHVDRLVAARMRAVLLTAEAR-R 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D + A + A+ A + L Q + R+A ILE WK PHP +A Sbjct: 238 LESADPETAARLADRAATSSPGFAPAAELAGRLLAEQRRHRRAVDILEDAWKHAPHPALA 297 Query: 297 NIYTHLLSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +L +T + +R L +N + ES +++ + AL+ G+ + AH+ ++ + Sbjct: 298 RAFANLRRSDTKAKRAERLRGLAALNPDHRESRLLLVETALDQGNREAAHSALKPVLETS 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD------GYLSSVWLPLS 409 P LA N + W A HA + W D Y + W + Sbjct: 358 PVSARACALAARLARLEENPEDAQRWMARASHAPAEADWSDIDEGGQAFNYTDADWKRMV 417 Query: 410 PISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469 P + E + +++L + + S K+ + Sbjct: 418 ESWGRDGVL------IHPRHERYEVAAAAAP--------ETVLIDARPTAERSAKRSEAG 463 Query: 470 EDSTIHPLDPHIRQPDDPGIKE 491 + + P + PDDPG + Sbjct: 464 DKQGPNFYVP-VPAPDDPGASD 484 >gi|218679767|ref|ZP_03527664.1| putative transmembrane protein [Rhizobium etli CIAT 894] Length = 280 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 5/281 (1%) Query: 32 WGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG 91 W ++Y+T V S + + A +L++ R + P + R D+GY+AL TG Sbjct: 1 WEGQIYQTKLIVAASAIIALIAAVMLVWWFIRLVWTSPHSVTRYFRARKRDRGYQALSTG 60 Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L++ A N LARKM + E L+ LLE Q AL E +++ A K E M P Sbjct: 61 LIAAGAGNALLARKMAARSRGLIRADQEPLINLLEAQAALIEGRHDEARAKFEAMANDPE 120 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 TRE + LY E+ R+G +A++YA KA D +P PW +A ++ A W AI L Sbjct: 121 TRELGLRGLYLEARRLGANEAARQYAEKAADNAPYLPWAAQATLEYRSQAGRWDDAIRLL 180 Query: 212 NQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 Q+K E NR A+LL AR+ E + G+ + DA+++LKL + I A++ AA Sbjct: 181 EQQKAARVVEKAEANRLHAVLLTARAGERLE-GNPAGARDDALQALKLAADFIPAALIAA 239 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 K+L + RKA ILE+ WK PHPEI Y S ++ Sbjct: 240 KALFREGGLRKAASILEQAWKSAPHPEIGQAYVRARSGDST 280 >gi|114798425|ref|YP_761904.1| HemY domain-containing protein [Hyphomonas neptunium ATCC 15444] gi|114738599|gb|ABI76724.1| HemY domain protein [Hyphomonas neptunium ATCC 15444] Length = 478 Score = 239 bits (610), Expect = 8e-61, Method: Composition-based stats. Identities = 74/389 (19%), Positives = 151/389 (38%), Gaps = 9/389 (2%) Query: 15 ICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFH 74 P +V+ G + V +L F L + ++ L P + Sbjct: 18 AVLAWWAFSLPGEVTFPVGQEIVSVRAGVAAILLLVFGGLIALAWWLATGILVLPGRISK 77 Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 K AL GL++ + A ++ + +E L LLE + A A Sbjct: 78 AQRLSRARKANAALAEGLLAAEGGDSKAALRLARKSMRHA--EDERLKLLLEARAAEAND 135 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + A ++ ++P + + + GD +A+ A +AL++ DA W ++ Sbjct: 136 DWAGAERAWGLLTRLPGGQLAGLRGSATAASERGDPLTAETRAREALELRSDADWPFNSL 195 Query: 195 VQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 V +W +A+ L + R RA+L AR++ A A Sbjct: 196 FDIQVAKGDWDKALDTLAMGEKRGLVEGINLKRRRAVLFTARAVNLPIAEKPAAQKSLA- 254 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 ++++ + A+ A+ L+ K + A+ +LE WK PHP +A + L+ ++T Sbjct: 255 DAIRSAPDFPPAAYHGARFLMVDGKAKAAQGVLELGWKARPHPALAQLSRRLVPQDTREN 314 Query: 311 L-KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 + R L + + ES ++ ++++++ +A L ++ P + LL+ + + Sbjct: 315 IAARLKALVDAHPSHRESRILAAELSMDSADWVEAIKTLALLVEENPTARLCLLMERALK 374 Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDD 398 + + W + A+ A + W D Sbjct: 375 G-YGDLGEAQRWGRMAVSASREADWSDID 402 >gi|73666713|ref|YP_302729.1| hypothetical protein Ecaj_0080 [Ehrlichia canis str. Jake] gi|72393854|gb|AAZ68131.1| putative Uncharacterized membrane-bound protein [Ehrlichia canis str. Jake] Length = 413 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 86/429 (20%), Positives = 171/429 (39%), Gaps = 26/429 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ + F +++L I + V ++I W + ++ FL ILL Sbjct: 1 MITSLLIFVIVALTIG--LWVIDCDGIITIDWLGYDIEVNILFTFFVVAVFLLVLILLVR 58 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L+ +K L G M + ++ ++ +++ +F + Sbjct: 59 LVFCLIQS---LYRYRRDS-QNKKMILLEQGYMYLNCGDVE---RVEKIITKLGSFDHPS 111 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATK 179 YLL+ ++ R+Y +A + + +P L + D K Sbjct: 112 -FYLLKGRVCFDNRKYGLAEKYFGQFAKIVPMIDASLGVHLLNVISQEEDQIQQLSLLRK 170 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENA 237 L+I W ++ Y L+++WS AI + + K K +N + + +L A Sbjct: 171 MLEIFYKQSWSAIFKLEIYRLSRDWSNAIEEIKKVIKLKVNLPYNVQDMLNIFYYAL--A 228 Query: 238 DKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + + Y D ++ L N S + A+ ++ ++KRKA ILE ++ NPHP Sbjct: 229 KQCYDVQRYDDGLKVLDNIKNCQKYSTPIVLLKAQCYLNTDRKRKAVSILEYEYRTNPHP 288 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +IAN+Y ++ N+ +L N E S+ ++++ A+ +G D A K Sbjct: 289 DIANLYLDIMQHNSHA----IHKLYSFNTEYYFSIYLIARDAINLGEYDAAMKYLNNEFK 344 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLSPI 411 ++ L+ ++ + S + +++LYWT A A+ + W +S+ W Sbjct: 345 TQTYISLYFLMLKL-KVLSQDYNELLYWTDKIAKDAISEQHWSCTKCQCVSTRWHYECDN 403 Query: 412 SKTLCYFEW 420 K W Sbjct: 404 CKGFNTIVW 412 >gi|295687520|ref|YP_003591213.1| HemY domain-containing protein [Caulobacter segnis ATCC 21756] gi|295429423|gb|ADG08595.1| HemY domain protein [Caulobacter segnis ATCC 21756] Length = 511 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 97/406 (23%), Positives = 164/406 (40%), Gaps = 10/406 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ F+++ V S + ++ P S+ W + + F + +L+ Sbjct: 1 MTRVVFALFLVAAVAVSVLALTGEPGRASLEWMGWRIEMTAAAAALLTLFSALLFTVLWR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + + +AL G +++AA + AR++ S + Sbjct: 61 GVIWIVEAPRRAARARAEAKRKQAIEALTRGFLAVAAGDGSEARRLAQK-SAELAEDAPG 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV +L Q A A A ML P R + L + GD +A R+A A Sbjct: 120 LVRVLAAQAAEAAGDRGAAASAYNAMLGFPEMRLAGLRGLMQAALADGDKITALRHAETA 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236 ++ A W A+++ + A +W+ A+ L +K + R+RA LL A + Sbjct: 180 YGLARTARWAWRALLEARLEAGDWAAALQLVQGALERKIVSPAVAERSRAALLAASAASL 239 Query: 237 ADKGDMIA---SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D A + A +S+KL + I AA+ L + K KA ++E WK PHP Sbjct: 240 EESPDPKARAQALDFANQSVKLKPDFAPGVIMAARLLADEGKTAKAGQLIETAWKAQPHP 299 Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y L +E + +R L + E ESL++ + AL G A A A L Sbjct: 300 ALWLAYRDLKTNETPKARAQRLAALAAMRPEVRESLILRVEAALVGGDPIAARAAARLLD 359 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398 AP L+A++ AN + W + A +P W D Sbjct: 360 DEAPTARFAGLMARVAAANGQADE-ARAWIARGIDAPREPDWSDLD 404 >gi|16124330|ref|NP_418894.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15] gi|221233012|ref|YP_002515448.1| HemY domain membrane protein [Caulobacter crescentus NA1000] gi|13421172|gb|AAK22062.1| hypothetical protein CC_0075 [Caulobacter crescentus CB15] gi|220962184|gb|ACL93540.1| HemY domain membrane protein [Caulobacter crescentus NA1000] Length = 511 Score = 229 bits (584), Expect = 8e-58, Method: Composition-based stats. Identities = 95/406 (23%), Positives = 164/406 (40%), Gaps = 10/406 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R+ F++++V S + ++ P S+ W + + F + LL+ Sbjct: 1 MTRVAFALFLVAVVAVSVLALTGEPGRASMEWMGWRVEMTAAAAALLTLFSALMFTLLWR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + + +AL G +++AA + AR++ S + Sbjct: 61 GVIWIVEAPRRAARARAEAKRKQAIEALSRGFLAVAAGDGSEARRLAQKSS-ELAEDAPA 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV +L Q A A A ML P R + L + GD +A R+A A Sbjct: 120 LVRVLAAQAAEAAGDRGAAKSAYNAMLGFPEMRLAGLRCLMLAAQAEGDRQTAIRHAETA 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236 ++ A W A+++ + A +W+ A+ L +K + R+RA LL A + Sbjct: 180 YGLARTARWAWRALLEARLEAGDWAAALQLVQGALERKIVSPVVAERSRAALLAASAASL 239 Query: 237 ADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D + A +S+KL + + AA+ L K KA ++E WK PHP Sbjct: 240 VNADDPKTRAQALDFATQSVKLKPDFAPGVVMAARLLAEDGKTAKAGGLIETAWKAEPHP 299 Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y L +E + +R L + E+ ES ++ + AL G A A A L Sbjct: 300 ALWLAYRDLKTNETPKARAQRLAALAAMKPEARESRLLRVESALIGGDPVAARAAARLLD 359 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398 AP L+A++ A + + D+ W + A +P W D Sbjct: 360 DEAPTARFAGLMARVAAA-NGDADEARAWIARGVAAPQEPDWSDLD 404 >gi|218507798|ref|ZP_03505676.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5] Length = 240 Score = 229 bits (584), Expect = 8e-58, Method: Composition-based stats. Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 4/240 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ + ++ L+ F + P D+S+ W ++Y+T V +S + + A ++++ Sbjct: 1 MIRLVVFALLVLLLAYGFSWFADRPGDLSLIWEGQIYQTKLIVAVSAIIALIAAVMIVWW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P + R D+GY+AL TGL++ A N LARKM + E Sbjct: 61 FVRLIWTSPHSVTRYFRARKRDRGYQALSTGLIAAGAGNALLARKMAARSRGLIRADQEP 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ LLE Q AL E +++ A K E M P TRE + LY E+ R+G +A++YA KA Sbjct: 121 LINLLEAQAALIEGRHDEARAKFEAMANDPETRELGLRGLYLEARRLGANEAARQYAEKA 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLEN 236 D +P PW +A ++ A W AI L Q+K E NR A+LL AR+ E Sbjct: 181 ADNAPYLPWAAQATLEYRSQAGHWDDAIRLLEQQKAARVVEKAEANRLHAVLLTARAAEK 240 >gi|329848281|ref|ZP_08263309.1| hemY protein [Asticcacaulis biprosthecum C19] gi|328843344|gb|EGF92913.1| hemY protein [Asticcacaulis biprosthecum C19] Length = 515 Score = 223 bits (568), Expect = 7e-56, Method: Composition-based stats. Identities = 97/491 (19%), Positives = 165/491 (33%), Gaps = 27/491 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R + I+ +I I + P S++W N + I+ F + + Sbjct: 1 MIRSLLILLAITTLIVLTIGMVGDPGLASLSWMNYRIDIPATAAVIIIGVMAFCAVAFWN 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 ++ + P + +G AL G M++A + AR+ V N Sbjct: 61 LALWLARSPQRAERARADQRRRQGDDALTRGFMAVAVGDGSEARR--HAVKALDLSDNTV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV +L A M+ +P + + L + R GD A + A +A Sbjct: 119 LVRILGAMAAEESGDAVATRTAYSAMVSVPELKLAGLRGLMQLAARQGDKAEAVKLAGEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236 + + W E + + A EW+ A+ L +K + R +A L+ A + Sbjct: 179 YNQPRPSMWAFETLFAARLEAGEWAEALDLIEGALTRKLISPIFSERAKASLMAASAARL 238 Query: 237 ADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 D + A + KL A+I AA+ L NK +AE +LE W PHP Sbjct: 239 ETSDDAQMRDQALDYAQRAAKLQPQFTPAAIIAARLLAKANKPGRAEDVLEAAWASRPHP 298 Query: 294 EIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIAL----EMGSIDQAHAKA 348 + Y L+S+ T + +R L + N + ES ++ + AL + A Sbjct: 299 AVWLAYRDLVSDETPKERARRLQGLVDRNAKHRESRLLQVERALLTNTKAEIAAALAALE 358 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD------GYLS 402 + + K I ++A+ Q + D W A A + W D Y + Sbjct: 359 EDSAEANLTKRICGVIARGAQG-LGDYDTARVWIAKAASARGEADWSDIDAEGKAFAYSA 417 Query: 403 SVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPS 462 + W + F P Y + + P G Sbjct: 418 ADWSDVILN------FAETAALSHPRYERGDKGLPEIPDMPPRYVPSMPFIKGPARRGSV 471 Query: 463 IKKVSSFEDST 473 S D Sbjct: 472 RTDPSHMPDDV 482 >gi|167644094|ref|YP_001681757.1| HemY domain-containing protein [Caulobacter sp. K31] gi|167346524|gb|ABZ69259.1| HemY domain protein [Caulobacter sp. K31] Length = 515 Score = 219 bits (559), Expect = 7e-55, Method: Composition-based stats. Identities = 86/406 (21%), Positives = 161/406 (39%), Gaps = 10/406 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R FF+++ + + + ++ P S+ W + + F +L+ Sbjct: 1 MIRAAIVFFLVAAIAVAVVALTGEPGVASLDWMGWRVEMTAAAAALLTLFTALLATILWR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + +G +AL G +++AA + AR++ + Sbjct: 61 ALLWVIEAPQRAARARAEAKRKQGVEALSRGFLAVAAGDGSEARRLAQKA-AELAEDAPA 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ +L Q A A + A + ML P R + L + GD A ++A A Sbjct: 120 LIRVLAAQAAEAAGDHTAARQAYNAMLGFPEMRLAGLRGLMQTALAEGDKGLALKHAETA 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITF----LNQKKKNAKEWNRNRAILLIARSLEN 236 ++ A W A+++ + A +W A+ L +K R RA LL A + Sbjct: 180 YGLAKTARWAWRALLEARLEAGDWKAALDLVQGALERKIVPPLVAERARAALLAASAASL 239 Query: 237 ADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D + A+++ +L + + AA+ + K KA ++E WK++PHP Sbjct: 240 EESDDPKTLAQALDFAVQAARLKPDFAPGVVMAARLQAADGKAAKAGSLIEAAWKLSPHP 299 Query: 294 EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y L SE + R L + E+ ES ++ + AL G A A A L Sbjct: 300 ALWLAYRDLKTSETPKLRAARLAALAGLKPEARESRLLKVESALIGGDPVAARAAARLLP 359 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398 + + L++++ A + D+ W + A +P W D Sbjct: 360 EEGLTARVAGLMSRVAYA-NGEADEARAWIARGVAAAQEPDWSDLD 404 >gi|315497774|ref|YP_004086578.1| hemy domain protein [Asticcacaulis excentricus CB 48] gi|315415786|gb|ADU12427.1| HemY domain protein [Asticcacaulis excentricus CB 48] Length = 515 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 77/395 (19%), Positives = 141/395 (35%), Gaps = 15/395 (3%) Query: 16 CSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHM 75 + P ++ W T + ++ FA + + + + P Sbjct: 16 AVAFAAAGDPGTATLIWLGYRIDTPAAAAVIVIGLLAFAAVCFWNLVLWMSRAPQRAERQ 75 Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 +G + L G +++ + + AR+ H N LV +L A Sbjct: 76 RANARRRQGEETLTRGFIAVVSGDGAEARRQAIKAVDLH--DNVALVRILNALAAETAHD 133 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 ML +P + + L + GD A R A + + A W + + Sbjct: 134 PVATRAAWTAMLSVPELKLAGLRGLMALAISEGDRTEAIRLAAEGYNQPKPAMWAFKTLF 193 Query: 196 QQYVLAKEWSRAITFLNQKKKNA------KEWNRNRAILLIARSLENADKGD-MIASYHD 248 + A EW+ A+ + E R + A LE A +G + Sbjct: 194 EARSTAGEWAEALDLVEGALNRKLVSPLFAERARAALMAASAARLEGAAEGQIREQALDY 253 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 A+ + KL ++ AA+ L + NK +AE +LE + PHP I Y L+++ T Sbjct: 254 AVRAAKLQPMFAPGAVIAARLLAAHNKLGRAEDVLEAAYAAQPHPAIWLAYRDLVNDETP 313 Query: 309 -GKLKRALRLEEINKESVESLVIVSKIALEMG---SIDQAHAKAMLAMKIAP-RKEIFLL 363 + +R L + N + ES ++ + ++ G I++A A + + + L Sbjct: 314 KDRARRLQGLIDRNPQHRESRLLEVERSVLSGVRADIERATAALEDELTEERLTRRLCGL 373 Query: 364 LAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398 +A+ A + D W A A +P W D Sbjct: 374 MAKAALA-LQDVDGARGWVAKASLAKAEPDWSDLD 407 >gi|68171287|ref|ZP_00544688.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str. Sapulpa] gi|88658307|ref|YP_506957.1| HemY domain-containing protein [Ehrlichia chaffeensis str. Arkansas] gi|67999302|gb|EAM85950.1| hypothetical protein EchaDRAFT_0515 [Ehrlichia chaffeensis str. Sapulpa] gi|88599764|gb|ABD45233.1| HemY domain protein [Ehrlichia chaffeensis str. Arkansas] Length = 416 Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 87/432 (20%), Positives = 167/432 (38%), Gaps = 29/432 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ + F +++L I + V + I W + L ++ ILL Sbjct: 1 MITSVLIFVIVALTIG--LWVIDCDGIIRIDWLGYDIEVNILFTLFVIAVVFLLLILLVR 58 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F C ++ +K L G M + ++ ++ + + F + Sbjct: 59 FIFCFSRC---VYRYKRD-LQNKKMVLLEQGYMYLNCGDVE---RVEKIIVKIGNFDHPS 111 Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +LL+ ++ +Y +A + + + +P L +I D K Sbjct: 112 L-FLLKGRVYFDTGKYILAEKYFTQFVKVVPVIDASLGIHLLNVIMQIEDQIQQLSLLRK 170 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKE--WNRNRAILLIARSLE 235 L+I W + Y ++++W AI + + K K +N + + +L Sbjct: 171 MLEIFFKQSWSAIFKLTIYRISRDWGNAIEEMKKIIKLKINLPLPYNTQEMLNVFYYAL- 229 Query: 236 NADKGDMIASYHDAI---ESLKLCDN--SIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A + I Y D + +++K C S ++ AK I +KKRKA ILE +++N Sbjct: 230 -AKQCYDIQKYDDGLRVLDNIKNCSQQCSTAVTLLKAKFYIDTDKKRKAVNILEHEYRIN 288 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PHP+IAN Y ++ ++ +L N S+ ++++ A+ G D A Sbjct: 289 PHPDIANFYLDIMQHSSHA----IHKLYSFNTGYYFSIYLIAQDAINSGEYDTAMKYLNH 344 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWISDDGYLSSV-WLPL 408 + K ++ L+ ++ + S N +++LYWT A A+ D W + W Sbjct: 345 SFKTKTYISLYFLVLKL-KVLSQNYNELLYWTDKIAKDAIADKYWSCTKCKYTPTCWHYE 403 Query: 409 SPISKTLCYFEW 420 K+ W Sbjct: 404 CDGCKSFNTIIW 415 >gi|261884328|ref|ZP_06008367.1| hypothetical protein CfetvA_03481 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 266 Score = 212 bits (539), Expect = 2e-52, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 115/227 (50%), Gaps = 4/227 (1%) Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + RA LL A+++ D + A+E+ KL + + A++ AA++L + + R Sbjct: 9 KDVVKKERAALLTAKAMATLD-THHAHAKAIALEANKLAPDLVPAAVVAARALFADGEIR 67 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIAL 336 K ILE WK PHP+IA+ Y + S +T +LKRA L + + E + +++ A Sbjct: 68 KGSKILEAAWKRFPHPDIASTYIYARSGDTAQDRLKRARHLVSLRSNNAEGSLALARAAY 127 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS 396 E G A A ++ APR+ +LLLA IE+A + + K+ W A+ A DP W + Sbjct: 128 EAGEYSVARDNAEQVLRAAPRESAYLLLADIEEAETGDQGKVRQWLAQAVKAPRDPAWTA 187 Query: 397 DDGYLSSVWLPLSPISKTLCYFEWKIP-TKSPEYISSENINFSLEMA 442 D Y+ W P+SP++ L FEWK+P + I E +A Sbjct: 188 -DCYVCEQWSPVSPVTGRLNSFEWKVPVVELAPAIEVEKPEIKAPLA 233 >gi|197106863|ref|YP_002132240.1| hypothetical protein PHZ_c3402 [Phenylobacterium zucineum HLK1] gi|196480283|gb|ACG79811.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 504 Score = 210 bits (534), Expect = 6e-52, Method: Composition-based stats. Identities = 81/406 (19%), Positives = 141/406 (34%), Gaps = 10/406 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R FF+++ V + + ++ P S+ W + + I + + Sbjct: 1 MIRAAIVFFMVAAVAVAVLALTGDPGRASVVWLGWRADMTAAAAILIALLASLLAAVAWR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + L P + + L G ++ A + AR++ Sbjct: 61 TVLWILDAPQRAERARAEARRRQASDVLSRGFLAAAGGDGSEARRLARKA-ADLASDAPG 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV +L Q A A + A ML P R L + G +A R+A +A Sbjct: 120 LVRVLAAQAAEAAGDLDEARAAYTAMLGFPEMRLAGHKGLMQLAAAQGARETALRHAQEA 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENA 237 + A W A+++ + A +W +A+ + L+A S Sbjct: 180 YGEARTARWAWRALLEAKLEAGDWPQALDLMKGALDRKIVPPVVAERARAALLAASAAQL 239 Query: 238 DKGDMIASY----HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + + A+E+ KL + AA+ L K +A +E W+V PHP Sbjct: 240 EHAPEPKARALAMDHAVEAAKLAPGFAPGVVMAARLLAQAGKVGRAAATVENAWRVAPHP 299 Query: 294 EIANIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y L ++ T + +R L +N ESL++ + AL G AH A Sbjct: 300 ALWLAYRDLRTDETPRERAQRLSELAAVNPTHRESLILHVERALIAGEPAAAHEAAGALE 359 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDD 398 I L+A+ A + W + A +P W D Sbjct: 360 AEPVTARIAGLMARAAFAAGAPDE-ARVWLARGISAPHEPDWSDLD 404 >gi|23004378|ref|ZP_00047740.1| hypothetical protein Magn03000405 [Magnetospirillum magnetotacticum MS-1] Length = 250 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 7/253 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + + ++++ + ++ +P V++ W S + L+ + +++A Sbjct: 1 MWRALVFLALLAIAAYGAVWIADHPGSVTVVWNGYEIGMSLAIALTGVLVAAIIIGIIWA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + PA + +R +KG +L G++++ + + AR+ + ++ Sbjct: 61 IMSGVIGLPASISRSTRERRRNKGLASLSRGMIAVGSGDPLAARR--HAGDAERLLGSQP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ Q A A + + M P TR + L+ E+ R D +A+ YAT+A Sbjct: 119 LTLLLKAQAAQISGDREAAEQAFKRMADDPETRVLGLRGLFVEARRREDEGAARAYATEA 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLEN 236 ++P W EAV++ EWS A + ++ + R RA+LL A + ++ Sbjct: 179 ARLAPSVTWANEAVLEAQCADGEWSAATETVERRASLGLMDKSVARRQRAVLLTA-AAQS 237 Query: 237 ADKGDMIASYHDA 249 + G+ + A Sbjct: 238 HEAGEPETATEQA 250 >gi|294085039|ref|YP_003551799.1| HemY domain-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664614|gb|ADE39715.1| HemY domain protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 445 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 80/442 (18%), Positives = 152/442 (34%), Gaps = 16/442 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++RL F I S ++ P V + W + ++++ F + Sbjct: 2 LIRLAVLFLFILAAAASASWLAAQPGHVQVEWLGWRLEMRTSLAVALVIIFALGMVFFDR 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R S P L + KR G+KAL GLM+++A + Sbjct: 62 LYRLIKSLPGWLGSSVQKRRDVAGHKALTLGLMAVSAGEPAE--AKRQAARARRLLDAPQ 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q + + A ++ + + + ++A A KA Sbjct: 120 LTNLLAAQASALAGDHQAARRYFTSLIAEDDSAFLGHIGMMRLALDDDAPDAALASARKA 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSR---AITFLNQKKKNAKEW--------NRNRAILL 229 L + P + +VQ W A+ L ++++ + R LL Sbjct: 180 LALRPKSTLAAAHIVQLEAARHNWQAALPALDVLASQRRSGQSGSDEDGNNIQSQRTALL 239 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + E+A D + I +K + A + + + RKA +LEK + + Sbjct: 240 YMDACEHAQNADRQGAQKVLIRIIKDVPGFLPAVLMLSDIYLETGANRKAVKVLEKAFGI 299 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKA 348 PH E+AN N G + + + L +++ + + I++ AL++G +A + Sbjct: 300 IPHIEVANRLKPAWQVNDGGFIAKLMTLIPADEDIADAARCIIANQALDVGLDGEAAGQI 359 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGY-LSSVWLP 407 + + + + A+I QA + D +A A W L W Sbjct: 360 TAIPESRRDADAWQVAARIAQA-HGHQDDANAALVAASKAPRPQGWQCGACRSLHDDWQS 418 Query: 408 LSPISKTLCYFEWKIPTKSPEY 429 P + W+ P + Sbjct: 419 HCPDCDSFAQLVWQRPDRVTPL 440 >gi|83310058|ref|YP_420322.1| hypothetical protein amb0959 [Magnetospirillum magneticum AMB-1] gi|82944899|dbj|BAE49763.1| Uncharacterized membrane-bound protein [Magnetospirillum magneticum AMB-1] Length = 469 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 87/438 (19%), Positives = 149/438 (34%), Gaps = 15/438 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +LRLI +S V+ + + S V + W T+ V+L IL + L Sbjct: 2 LLRLIVLLIFMSPVVLATLWFSDNAGTVQVEWLGWHVDTNVPVLLGILLAVFMLFSGLTR 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 +S PA L R +KG AL L + + ++ R++ + + + Sbjct: 62 LSALVADLPAKLGKSRQARGREKGMLALLAALDAAESGDVGDGRRLGAEAA--RLLDSPE 119 Query: 121 LV----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L L+ A K + + P Sbjct: 120 LAARLDRLIPRPAAPPAATLRPEPAKGRLFAKKPPAPPVVEREPPPPVKAAPPPAPVAVV 179 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAKEWNRNRAILLIAR 232 T A P A + EW+ A L+ + + R RA++L + Sbjct: 180 ETPAAPADPSAEDAAAFAAKLR--DGEWAAAQACIDATLSAGRLSPALAARWRAVVLEGQ 237 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + D S A E+L + A++ + +S+ ++ +AE +L +W+ P Sbjct: 238 AC-LDSQDDPARSLRLAREALAADPGFLPAALHVLRQEVSEGRRSEAEAVLAAVWRSAPA 296 Query: 293 PEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + L E+ +LKR L E E + + A+ A M A Sbjct: 297 RILLETCSPLWREDDAESRLKRLEVLAEWAPHDPEGHLAAGEAAVAAAKWGVARRHLMAA 356 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSP 410 +KIAP L+A+IE ++ W + A P W+ + G S W P Sbjct: 357 LKIAPDALGCRLMAEIEDKEPGGAERAEIWRRREREAPAAPTWVCEACGATSGSWAPYCS 416 Query: 411 ISKTLCYFEWKIPTKSPE 428 +W P PE Sbjct: 417 ACAAGAAIQWTRPAHKPE 434 >gi|78033476|emb|CAJ30093.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1] gi|144901138|emb|CAM78002.1| TPR-like protein [Magnetospirillum gryphiswaldense MSR-1] Length = 449 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 84/455 (18%), Positives = 155/455 (34%), Gaps = 23/455 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +LRLI +S V+ + + S V + W ++ V+L+++ + L Sbjct: 2 LLRLIVLLIFMSPVVFATLWFSDNVGSVQVEWLGWHVDSNMPVLLAVILVVFLIFSALSR 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 +S P+ L R +KG AL L + + ++ R+ + + +N Sbjct: 62 LSALVADLPSKLGKSRQARGLEKGMSALLAALDAAESGDVGEGRRFAAEAA--RLLNNPG 119 Query: 121 LV----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L LL A +A +LE R+ ++ Sbjct: 120 LAARLDRLLPRPPAQ-----PVAPTRLEAAKGRLFARKPGPPPPPTPVVDKIQPVVVEKL 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIAR 232 A S + A + A EW A ++ + + R R++ L + Sbjct: 175 AAAPAGPSREDLEAFSAKI----RAGEWGAAQAWIGEAVLAGRLTPLVAARWRSVALEGQ 230 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +LE A GD A E++ + ++ ++ +S+ +K +AE +L +W P Sbjct: 231 ALE-ASPGDPARPLRLAREAMAADQTFLPPALHVIRAEVSEGRKAEAETLLASVWPHVPA 289 Query: 293 PEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + L + LKR L I + + + A + A M A Sbjct: 290 RVLLDACAPLWRDEDQDACLKRLEALAAIAPHHPDGHLAAGEAAFAVQKWGVARRHIMAA 349 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK-ILYWTQSALHAMPDPLWISDDGY-LSSVWLPLS 409 +KIAP L+A+IE+ + + W + A P W+ + W Sbjct: 350 LKIAPDALGCRLMAEIEEREPGGSARSAEIWRRREHEASLSPAWVCGACARVVEAWAACC 409 Query: 410 PISKTLCYFEWKIPTKSPEYISSENINFSLEMAYP 444 P + EW K+ E + S Sbjct: 410 PSCAGVATIEWTRSVKAEEALLPPATTASSMETPR 444 >gi|46202657|ref|ZP_00208607.1| hypothetical protein Magn03007324 [Magnetospirillum magnetotacticum MS-1] Length = 471 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 89/241 (36%), Gaps = 7/241 (2%) Query: 200 LAKEWSRAIT----FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 EW+ A L+ + + R R ++L ++ + D S A E+L Sbjct: 203 RDGEWAAAQACIDATLSAGRLSPALAARWRVVVLQGQAC-LDSQDDPARSLRLAREALAA 261 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRA 314 + A++ + +S+ ++ +AE +L +W+ P + L E+ +LKR Sbjct: 262 DPGFLPAALHVLRQEVSEGRRSEAEAVLAAVWRSAPARILLETCAPLWREDDAESRLKRL 321 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 L E E + + A+ A M A+KIAP L+A+IE Sbjct: 322 EALAEWAPHDPEGHLAAGEAAVAAAKWGVARRHLMAALKIAPDALGCRLMAEIEDKEPGG 381 Query: 375 TDKILYWTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSE 433 ++ W + A P W+ + G S W P +W P PE + Sbjct: 382 AERAEIWRRREREAAAAPTWVCEACGATSGSWAPYCSACGAGAAIQWTRPAHKPENPPTP 441 Query: 434 N 434 Sbjct: 442 A 442 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 2/126 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +LRLI +S V+ + + S V + W T+ V+L IL + L Sbjct: 4 LLRLIVLLIFMSPVVLATLWFSDNAGTVQVEWLGWHVDTNIPVLLGILLAVFMLFSGLTR 63 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 +S PA L R +KG AL L + + ++ R++ + + + Sbjct: 64 LSALVADLPAKLGKSRQARGREKGMLALLAALDAAESGDVGDGRRLGAEAA--RLLDSPE 121 Query: 121 LVYLLE 126 L L+ Sbjct: 122 LAARLD 127 >gi|58584738|ref|YP_198311.1| membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419054|gb|AAW71069.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 387 Score = 159 bits (403), Expect = 9e-37, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 87/229 (37%), Gaps = 14/229 (6%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ L ++W AI+ L + K + + A+ A + + KG+ + Sbjct: 163 IEHCALQEDWVNAISRLKEAIKFNVFLPFDCKKMLAVFYCALAKQYESKGNFKEAVKSLF 222 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 + C + A+ I K RKA +LE + VNP P+ A IY L SE Sbjct: 223 RAQSYCVTFQPINYLKAELYIRLGKIRKASAVLEAEYTVNPTPQSAKIYISLNSEG---- 278 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 A RL + + S +++ ++ G D A A+K A I+L++ Q++ Sbjct: 279 ---AERLYNLRPDYYFSYCLLASSSISSGKYDLASQYLNTAIKKANYMSIYLIMVQLKVV 335 Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417 D+ +YW A+PDP W + W Sbjct: 336 -LQEQDQTIYWLSKMGSEALPDPCWKCKNCNKELERWDYKCSSCNGFNC 383 >gi|58698408|ref|ZP_00373319.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225630891|ref|YP_002727682.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp. wRi] gi|58535063|gb|EAL59151.1| conserved hypothetical protein [Wolbachia endosymbiont of Drosophila ananassae] gi|225592872|gb|ACN95891.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia sp. wRi] Length = 406 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 14/229 (6%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ +L ++W AI L + K+ + A+ A + + KG+ + Sbjct: 181 IEHCILKEDWINAILRLKEAVKSNIFLPFDHKEMFAVFYCALAKQYESKGNFKEAIKSLF 240 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 + + + A+ I K RKA +LE + VNP P+ A +Y +L S Sbjct: 241 RAQRYSAIFQPINYLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS------ 294 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 K A RL + + S +++ ++ G D A AMK A I+ ++ Q+ + Sbjct: 295 -KGAERLYNLRPDYYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KV 352 Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417 DK++YW A+PDP W + W + Sbjct: 353 TLQEHDKVIYWLNKMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 401 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 +I + + I V E + + GN + I+ LF LL + R Sbjct: 1 MIYFIIFAFSFLFG-IWVKVSGEVIKLELGNYTISIDLYFIIFTCVVLLF---LLITLVR 56 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 FF S + ++ + R D+ L+ SI NI A+K+ +S++ L+ Sbjct: 57 FFSSISSTFANIRN-RRRDREELLLFEAFFSIDLDNIENAQKLVKSLSEE--SDRLSLIK 113 Query: 124 L 124 L Sbjct: 114 L 114 >gi|42521029|ref|NP_966944.1| hypothetical protein WD1232 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410770|gb|AAS14878.1| hypothetical protein WD_1232 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 233 Score = 153 bits (387), Expect = 7e-35, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 14/229 (6%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ +L ++W AI L + K+ + A+ A + + KG+ + Sbjct: 8 IEHCILKEDWINAILRLKEAVKSNIFLPFDHKEMFAVFYCALAKQYESKGNFKEAIKSLF 67 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 + + + A+ I K RKA +LE + VNP P+ A +Y +L S Sbjct: 68 RAQRYSAIFQPINYLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS------ 121 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 K A RL + + S +++ ++ G D A AMK A I+ ++ Q+ + Sbjct: 122 -KGAERLYNLRPDCYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KV 179 Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417 DK++YW A+PDP W + W + Sbjct: 180 TLQEHDKVIYWLNKMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 228 >gi|225677319|ref|ZP_03788296.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590646|gb|EEH11896.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 406 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 14/229 (6%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ +L ++W AI L + K+ + A+ A + + KG+ + Sbjct: 181 IEHGILKEDWINAILRLKEAVKSNIFLPFDHKEMFAVFYCALAKQYESKGNFKEAIKSLF 240 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 + + + A+ I K RKA +LE + VNP P+ A +Y +L S Sbjct: 241 RAQRYSAIFQPINYLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS------ 294 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 K A RL + + S +++ ++ G D A AMK A I+ ++ Q+ + Sbjct: 295 -KGAERLYNLRPDYYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KV 352 Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417 DK++YW A+PDP W + W + Sbjct: 353 TLQEHDKVIYWLNKMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 401 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 +I + + I V E + + GN + I+ LF LL + R Sbjct: 1 MIYFIIFAFSFLFG-IWVKVSGEVIKLELGNYTISIDLYFIIFTCVVLLF---LLITLVR 56 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 FF S + ++ + R D+ L+ SI NI A+K+ +S++ L+ Sbjct: 57 FFSSISSTFANIRN-RRRDREELLLFEAFFSIDLDNIENAQKLVKSLSEE--SDRLSLIK 113 Query: 124 L 124 L Sbjct: 114 L 114 >gi|88607729|ref|YP_505844.1| hypothetical protein APH_1339 [Anaplasma phagocytophilum HZ] gi|88598792|gb|ABD44262.1| conserved domain protein [Anaplasma phagocytophilum HZ] Length = 412 Score = 146 bits (368), Expect = 9e-33, Method: Composition-based stats. Identities = 68/429 (15%), Positives = 159/429 (37%), Gaps = 26/429 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ F V+SL C F + + + + + ++ +++ ++ + Sbjct: 1 MITYFLIFIVVSL-ACGFAVQGYEGLALKLEVLGYSVEAN---VVFVVFMLCVLFLFIVL 56 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R +C ++ + K Y + ++ ++ RK+ + F + Sbjct: 57 VGRACFACALCMYRVRRGSVSKK-YDEVGKSFAFLSVGHVDNVRKIVGISERFAKFDSPV 115 Query: 121 LVYLLEVQIALAERQYNIAHEKL-----EMMLQIPATR-EFAVYSLYFESCRIGDLNSAQ 174 L LLE + QY IA + + + ++ + L E R + Sbjct: 116 L-QLLEGCASFRIGQYEIAEKHFSLIPSKALQEVDLGAWLVGI--LANEKSR----DCKL 168 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 R ++ D+ W ++ + +W +T L +K + L + Sbjct: 169 RVLSRLYDVFHSRRWSVLFRLEIARMEGQWDEVLTALKLIEKYGVSHPYDLNDLELIARC 228 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + A+ M + + + +K A++ AK N ++A LE ++V+PHP+ Sbjct: 229 KLAELHYMQGDFKEGLGVIKGSSGLQ-ATLWRAKFNAKLNNVKRAMEELEAYYRVDPHPD 287 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A++Y ++ + + +L +N +S S +++ + +++ + A A+ Sbjct: 288 VASLYLSMVQDKNLA----VEKLNALNPDSYMSFLLMVRKYMDLKQYNAAEKHLKQALTQ 343 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYLSS-VWLPLSPIS 412 ++ ++ +I N D+I YW ++PD W + S W Sbjct: 344 YKYAGLYGMMLEI-MVRLGNLDEIEYWIDMMRRDSVPDMHWACEKCCYSPKEWCQECDEC 402 Query: 413 KTLCYFEWK 421 + +W+ Sbjct: 403 EGFNTIKWR 411 >gi|111073632|emb|CAL29494.1| hypothetical protein OW2-H [Wolbachia endosymbiont of Onchocerca volvulus] Length = 420 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 14/229 (6%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ Y+L ++W AI L + K + + A+ A + + +KG+ + Sbjct: 195 IEGYILHEDWINAILKLKEAIKFNIFLPFDCEKMLAVFYCASAKQYENKGNYKKALRSLF 254 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 ++ C + A+ I K RKA V+LE+ + VNP P+ A IY L S Sbjct: 255 KAQSYCAAFQPINYLRAELYIKLGKIRKASVVLEEEYTVNPTPQSAKIYISLNS------ 308 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 K A +L + + S +++ ++ + D A +AM+ A I+L++ Q++ A Sbjct: 309 -KGAEKLYNLRSDYYFSYCLLALSSISLSKYDLASQHLDIAMRKANYVSIYLIMIQLKVA 367 Query: 371 NSHNTDKILYWTQS-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417 ++++YW A+ DP W D W + Sbjct: 368 -LQEYEQVIYWLNKMDSEAISDPYWKCADCNKKLKQWGYKCSSCNSFNC 415 >gi|56417190|ref|YP_154264.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries] gi|56388422|gb|AAV87009.1| hypothetical protein AM1180 [Anaplasma marginale str. St. Maries] Length = 412 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 64/430 (14%), Positives = 135/430 (31%), Gaps = 30/430 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ + +++ + I ++ + I + + I+ + L Sbjct: 1 MITYLL-ICIVASLAAGLAIQNYEELVLKIEIAGYVIEANTVFIVFMACALALLLAALLR 59 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + R Y++L G ++ ++ + V + Sbjct: 60 LCLACALLVYKIKCKSVARQ----YESLGRGYALLSLGGAMNHEQIVNTVEKLRALDRYS 115 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS--AQRY 176 L +LE QY +A + L ++ P R L+ G+ + R Sbjct: 116 LA-MLETCAWFRLGQYEMAEKPLLLLKGSGLPDARL----GLWLVESLNGERSKDCKLRV 170 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIAR 232 + D+ APW ++ + +W + + K + R I + Sbjct: 171 LRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACLML 230 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + +GD + + A+I AK+ +KA LE +K PH Sbjct: 231 ARSCYQRGDYKEGLKLVGRATDMH-----AAILKAKTHEKLGNPQKARDALEACYKTTPH 285 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 PEI Y + + RL +N + S+++ K + + A A A+ Sbjct: 286 PEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQHAKRAI 341 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLSP 410 E++ L+A + + + + YW ++P+ W + W Sbjct: 342 ARYKYVELYCLMADVMARIGNIDEVV-YWITKMQKDSVPNMQWRCTKCCSVLPEWSHECS 400 Query: 411 ISKTLCYFEW 420 +W Sbjct: 401 ACNAFNSVQW 410 >gi|222475555|ref|YP_002563972.1| hypothetical protein AMF_890 [Anaplasma marginale str. Florida] gi|255004673|ref|ZP_05279474.1| hypothetical protein AmarV_05254 [Anaplasma marginale str. Virginia] gi|222419693|gb|ACM49716.1| Conserved hypothetical protein [Anaplasma marginale str. Florida] Length = 412 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 64/430 (14%), Positives = 135/430 (31%), Gaps = 30/430 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ + +++ + I ++ + I + + I+ + L Sbjct: 1 MITYLL-ICIVASLAAGLAIQNYEELVLKIEIAGYVIEANTVFIVFMACALALLLAALLR 59 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + R Y++L G ++ ++ + V + Sbjct: 60 LCLACALLVYKIKCKSVARQ----YESLGRGYALLSLGGAMNHEQIVNTVEKLRALDRYS 115 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS--AQRY 176 L +LE QY +A + L ++ P R L+ G+ + R Sbjct: 116 LA-MLETCAWFRLGQYEMAEKPLLLLKGSSLPDARL----GLWLVESLNGERSKDCKLRV 170 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIAR 232 + D+ APW ++ + +W + + K + R I + Sbjct: 171 LRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACLML 230 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + +GD + + A+I AK+ +KA LE +K PH Sbjct: 231 ARSCYQRGDYKEGLKLVGRATDMH-----AAILKAKTHEKLGNPQKARDALEACYKTTPH 285 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 PEI Y + + RL +N + S+++ K + + A A A+ Sbjct: 286 PEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQHAKRAI 341 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLSP 410 E++ L+A + + + + YW ++P+ W + W Sbjct: 342 ARYKYVELYCLMADVMARIGNIDEVV-YWITKMQKDSVPNMQWRCTKCCSVLPEWSHECS 400 Query: 411 ISKTLCYFEW 420 +W Sbjct: 401 ACNAFNSVQW 410 >gi|269958417|ref|YP_003328204.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel] gi|269848246|gb|ACZ48890.1| hypothetical protein ACIS_00214 [Anaplasma centrale str. Israel] Length = 412 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 71/424 (16%), Positives = 140/424 (33%), Gaps = 30/424 (7%) Query: 9 FVISLVICSFIIVSHYPED---VSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFF 65 F+I +V ++ + I + S ++ F+ + L + Sbjct: 5 FLICIVTSLAAGLAIQNYEELVFKIDIAGYVIEAS-----TVFVVFVACALALLLTALLR 59 Query: 66 LSCPAMLFHMLHKRNY-DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124 L L K K Y++L G +++ + ++ V + L + Sbjct: 60 LCLTCALIAYKIKCRSVAKRYESLGRGYALLSSGGVMNHGQIVDTVEKLRGLDCYSLA-I 118 Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LE QY +A + L + P R R D R + D Sbjct: 119 LETCAWFRLGQYEMAEKPLLTLKNSCLPDGRLGLWLLELLNRERSKDCR--LRVLRRLCD 176 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIARSLENAD 238 + PW T V+ + +W A+ + + R + + + Sbjct: 177 VFRRVPWATMFKVEIARIEGDWDTALVETRLAARRGVVLPYKHERMGDVACLMLARACCQ 236 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 +G+ + + A+I A RKA +LE +K PHPE+ Sbjct: 237 RGNYREGLKLVEKVTDMH-----ATILKATIHEKLGNLRKARDVLEVCYKTAPHPEVVTA 291 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y + + RL +N E S+++ + + + + A A A+ Sbjct: 292 YLAVSQDQDAA----MERLSSLNAEHYVSMLLAIRRYVSVKQYNAAEQYAKRALAKYKYV 347 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSA-LHAMPDPLWIS-DDGYLSSVWLPLSPISKTLC 416 E++ + ++ A N D++ YW + ++P+ W + +SS W + T Sbjct: 348 ELYCAMMEV-MACIGNVDEVAYWLEKMRKDSLPNMQWRCTECCAVSSGWSHECSVCSTFD 406 Query: 417 YFEW 420 +W Sbjct: 407 SIQW 410 >gi|254995360|ref|ZP_05277550.1| hypothetical protein AmarM_05429 [Anaplasma marginale str. Mississippi] Length = 411 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 63/431 (14%), Positives = 135/431 (31%), Gaps = 33/431 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ + +++ + I ++ + I + + I+ + L Sbjct: 1 MITYLL-ICIVASLAAGLAIQNYEELVLKIEIAGYVIEANTVFIVFMACALALLLAALLR 59 Query: 61 VSRFFLSCPAMLF-HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + + ++ G AL ++ ++ + V + Sbjct: 60 LCLACALLVYKIKCKSVARQYESLGRYAL------LSLGGAMNHEQIVNTVEKLRALDRY 113 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS--AQR 175 L +LE QY +A + L ++ P R L+ G+ + R Sbjct: 114 SLA-MLETCAWFRLGQYEMAEKPLLLLKGSSLPDARL----GLWLVESLNGERSKDCKLR 168 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRA--ILLIA 231 + D+ APW ++ + +W + + K + R I + Sbjct: 169 VLRRLCDVFHRAPWAAMFRLEIARIEGDWDTVLVEVKLAAKRGIVLPYKHERMADIACLM 228 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +GD + + A+I AK+ +KA LE +K P Sbjct: 229 LARSCYQRGDYKEGLKLVGRATDMH-----AAILKAKTHEKLGNPQKARDALEACYKTTP 283 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 HPEI Y + + RL +N + S+++ K + + A A A Sbjct: 284 HPEIVTAYLAVSQDYDTA----TERLSSLNPDHYVSMILSVKRYMNAKQYNAAEQHAKRA 339 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLWIS-DDGYLSSVWLPLS 409 + E++ L+A + + + + YW ++P+ W + W Sbjct: 340 IARYKYVELYCLMADVMARIGNIDEVV-YWITKMQKDSVPNMQWRCTKCCSVLPEWSHEC 398 Query: 410 PISKTLCYFEW 420 +W Sbjct: 399 SACNAFNSVQW 409 >gi|99034641|ref|ZP_01314590.1| hypothetical protein Wendoof_01000593 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 155 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 10/156 (6%) Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 A+ I K RKA +LE + VNP P+ A +Y +L S K A RL + + Sbjct: 3 YLKAELYIKLGKIRKASAVLEAEYTVNPTPQSAKMYINLNS-------KGAERLYNLRPD 55 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 S +++ ++ G D A AMK A I+ ++ Q+ + DK++YW Sbjct: 56 YYFSYCLLALSSMSSGKYDLASQYLDTAMKKANYMSIYFIVIQL-KVTLQEHDKVIYWLN 114 Query: 384 S-ALHAMPDPLWISDDGYLS-SVWLPLSPISKTLCY 417 A+PDP W + W + Sbjct: 115 KMGSEALPDPGWKCKNCNRELEQWDHKCSSCNSFNC 150 >gi|332304811|ref|YP_004432662.1| HemY domain protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172140|gb|AEE21394.1| HemY domain protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 393 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 132/386 (34%), Gaps = 20/386 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F + + + ++ V I + + + F + + + +L Sbjct: 1 MIRILMVFVALLIAVLIGSLIFDDKGYVFIDFAGYVVEMNVFSMAIMTILVIVGLLLFSW 60 Query: 61 VSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 + + L + ++ A GL+++A + ARK + + Q+ Sbjct: 61 LVKKLIMIISGSKNWLGNWGTRKKKR----AFTNGLIALAEQDYLEARKQLASIEQEDFD 116 Query: 117 HNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + LL A + + A E + P + A L + + A Sbjct: 117 G----LNLLAAAEAELQLQNPEGAQEYWRLATSYPKSAFAAKLCLVRDHLQNQQPMKALE 172 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----A 231 D V Q V A +W L KK E + L A Sbjct: 173 ILDDVNDKQKRQKSVLTLRAQALVQAGKWQELKDRLPSWKKALGEHYEHYMQLASSGNFA 232 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++H +S + A + K LI Q AE L + K P Sbjct: 233 EIASKEGANQLKENWHALPKSTRRDPALQAAYV---KQLIDQGMHIDAEAALGEYHKNKP 289 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 HP + +Y L + LK+ + +++ +VE L + +A + A A Sbjct: 290 HPMLLPLYKELRLSHPTTALKQLEQWLKVDDMNVELLSTLGTLAYHANDLSLAEKALSKA 349 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK 377 +K+ R++ LLLA+I+++ + Sbjct: 350 IKLGNRQQDILLLAKIKESQQDDQQA 375 >gi|109896669|ref|YP_659924.1| HemY-like [Pseudoalteromonas atlantica T6c] gi|109698950|gb|ABG38870.1| HemY-like protein [Pseudoalteromonas atlantica T6c] Length = 393 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 70/386 (18%), Positives = 130/386 (33%), Gaps = 20/386 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F + + + ++ V I + + + F + + + +L Sbjct: 1 MIRILMVFVALLIAVLVGSLIFDDKGYVFIDFAGYVVEMNVFSMAIMTILVIVGLLLFSW 60 Query: 61 VSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 + + L + ++ A GL+++A N ARK + + Q+ Sbjct: 61 LIKKLIMIISGSKNWLGNWGSRKKKR----AFTNGLIALAEQNFLEARKQLASIEQEDFD 116 Query: 117 HNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + LL A + + A E + P + A L + + A Sbjct: 117 G----LNLLAAAEAELQLQNPAGAQEYWRLATSYPKSAFAARLCLVRDHLQNQHPVKALD 172 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----A 231 + D V Q V A +W L KK E + L A Sbjct: 173 ILDELDDKQKRQRSVLTLRAQALVQAGKWQELKDRLPSWKKALGEHYEHYMQLASKGNFA 232 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++H +S + A + K LI Q AE L + K P Sbjct: 233 EIASKEGANQLKENWHSLPKSTRRDPALQAAYV---KQLIDQGMHIDAEAALGEYHKNKP 289 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 HP + +Y L LK+ + + + +VE L + +A A A Sbjct: 290 HPMLLPLYKELKLSQPTTSLKQLEQWLKADDMNVELLSTLGAVAYNAKDFSLAEKALSKA 349 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK 377 +K+ R++ LLLA+I+++ N Sbjct: 350 IKLGNRQQDILLLAKIKESQQDNQQA 375 >gi|148259145|ref|YP_001233272.1| HemY domain-containing protein [Acidiphilium cryptum JF-5] gi|326402298|ref|YP_004282379.1| hypothetical protein ACMV_01500 [Acidiphilium multivorum AIU301] gi|146400826|gb|ABQ29353.1| HemY domain protein [Acidiphilium cryptum JF-5] gi|325049159|dbj|BAJ79497.1| hypothetical protein ACMV_01500 [Acidiphilium multivorum AIU301] Length = 394 Score = 113 bits (282), Expect = 8e-23, Method: Composition-based stats. Identities = 62/441 (14%), Positives = 136/441 (30%), Gaps = 59/441 (13%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR R+ V ++ ++ V++ G S V + +L + +L+ Sbjct: 1 MLRAFRFALVAITLLGIAWFLAGLQGHVTVEIGTYAATASTPVAILLLVLLIVVVVLVLG 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R LS P + + D A L ++AA + A + + Sbjct: 61 LLRGALSLPRRISVRRGRARRDAADSAALRALSALAAGDTEAAA--GHARTARRHAPEAP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATK 179 L + + A A + + L D + R A + Sbjct: 119 LTLYVSAETARQAGDAAGAEALFSNLAKHGDAGFLGWRGLLTARPLPQDDPDRLARSAEQ 178 Query: 180 ALDIS---PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A + P++ W+ E V+ + +S A A + + Sbjct: 179 ARQAAASYPNSAWLREQRVRIALGQGRFSEAARLATDPAARAA-----------LAIMAS 227 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + A ++++L A + ++ + +A+ L++ W++ PHP++A Sbjct: 228 REVAGEPLAIDWARDAVRLAPGLPEAHLALFEARAKAGQAWRAKRALKRGWRIAPHPDLA 287 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + L+ + + + A +L E+N ES ++++ A + +A Sbjct: 288 DAWLAALT-SPLERATAAAKLAELNPGHPESEALLARTARAANLVGEAERH--------- 337 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTL 415 E+ +W+ W P + Sbjct: 338 -----------ERHGGGKG-----------------VWVCATCDTEHEAWQPTCRKCGAI 369 Query: 416 CYFEW---KIPTKSPEYISSE 433 W P +P + + Sbjct: 370 GSLGWLRRTNPESTPRLLPAP 390 >gi|292493891|ref|YP_003529330.1| HemY domain protein [Nitrosococcus halophilus Nc4] gi|291582486|gb|ADE16943.1| HemY domain protein [Nitrosococcus halophilus Nc4] Length = 428 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 64/396 (16%), Positives = 138/396 (34%), Gaps = 15/396 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVS-HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M++ + + ++ ++ +++ + + +G + T+ + + + L Sbjct: 1 MMKAVIFGLIVLILAVGLELLTHDDSGYLVVGYGQWMVETTLTLAVIVAGLAFIGGYLAL 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 P L +R + K L GL+ I N A + + V + Sbjct: 61 RFFSNMWRAPQRLGETRQRRRNSRASKMLIEGLIDIEEGNWDRAER--ALVKDIAHSNTP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L Y+ + A + Y + + + PA + G + A Sbjct: 119 LLNYIAAARAAQNQGAYER-RDHYLDLARETTPAANFAVELAQAELQISSGQFDQALATI 177 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + P P + + Y ++W + + L + +K L + +E Sbjct: 178 RHLRALDPRHPQPLKLLKSLYSQHRDWGQLLGLLPELRKRRLVNKEESQSLEVMAHVELL 237 Query: 238 DKGDMIASYHDAIESLKLCDN------SIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + S IE+ K N I+A+ A L+ +N+ AE +L++ K N Sbjct: 238 QEAARSESDAYLIEAWKAVPNRLRRHPRIVAAYVYA--LLERNELDLAEQLLQETLKRNW 295 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+ +Y + S + V +L RA + L+ + ++A G +A + Sbjct: 296 SDELIYLYGLVRSSDLVAQLTRAEAWLSQQGNNPWLLLTLGRLAQYNGLWGKARQYLETS 355 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + APR E + L ++ + +++ L L Sbjct: 356 IAYAPRPEAYRELGKVLE-EIGDSEAALECYSKGLS 390 >gi|330957340|gb|EGH57600.1| hemY protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 414 Score = 111 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 140/390 (35%), Gaps = 23/390 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 ++ + +++ + ++ + V I + N Y +S + L++L + L+ V Sbjct: 6 VLLFIAIVAAALIGVA-IADHAGYVLIAYKNFRYESSLWATLALLLAVMLVIFLVRLVIT 64 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 + ++ + + + A+ G M +A A++ ++ + L Y Sbjct: 65 LLTTSGGVVNPWSRRNRHRRVQMAIEQGQMDLAEGRWASAQRHLQRAAEADA--HPLLYY 122 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKA 180 + + A + +Y LE L+ E A+ + GD + A Sbjct: 123 IGAARAANEQGRYEDCDSLLERALERQPQAELAI--ALNHAQLQQDRGDTDGALITLQAM 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLI 230 P P V + + Y +WS I L + +K+ + A + L Sbjct: 181 QQRHPHNPQVLRQLQRLYQQRGDWSELIRLLPELRKDKVLPPKELAELERRAWGENLTLA 240 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKV 289 ++ + S A +SL + A A L + +AE +L K Sbjct: 241 GHRNDSEGTLTGLPSLEQAWQSLSAAQRQEPQLVLAYADQLRRLGAETQAEEVLRTALKR 300 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + H +A +Y + + + +L+ A + + L+ + +I L+ +A Sbjct: 301 DYHSHLARLYGLVRGSDPLKQLQAAEGWLKHHPSDPSLLLSLGRICLQGRLWGKARDYLE 360 Query: 350 LAMKI----APRKEIFLLLAQIEQANSHNT 375 ++++ E+ LLAQ+ + + N Sbjct: 361 SSLRLQRNPETCAELARLLAQMGETDRSNQ 390 >gi|270158069|ref|ZP_06186726.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella longbeachae D-4968] gi|289163666|ref|YP_003453804.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella longbeachae NSW150] gi|269990094|gb|EEZ96348.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella longbeachae D-4968] gi|288856839|emb|CBJ10650.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella longbeachae NSW150] Length = 394 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 134/382 (35%), Gaps = 41/382 (10%) Query: 1 MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+R++ + +++ VI I ++ P V I + T+ +V + L L Sbjct: 1 MIRVLFAFLILLAAVILG-IQLNKDPGYVLIAINHWTIETTVWVAIFTLILLFMIVYLFL 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHN 118 + + P+ L ++ + K +A+ GL+ + N A+ + + Sbjct: 60 GICQKISLTPSKLTRWHARKRFRKA-QAITRKGLIEYSEGNWVKAK--NHLIQGLPNSDT 116 Query: 119 EYLVYLLEVQIALAERQY----NIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLN 171 L YL + A + E + M + E ++ Sbjct: 117 PLLNYLTAARAAQKMGDNQLRDDYLREAQQSMPEAKIAVEL------TQAELQLSNHQWE 170 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAI 227 A I+P P+V +++ Y ++W + IT L K N +E+ + + Sbjct: 171 QALATLKHLHTIAPRHPYVLMLMMRLYQEIRDWPQLITLLPDLKKYKVINQQEFEQIQYD 230 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--------AAKSLISQNKKRKA 279 + R + A + ++ SI +I + L+ N+ A Sbjct: 231 TYLQRLRDLAKQNQSS--------AVNSFFQSIPKTIVNNPEVIAEYTRFLLKNNEFTTA 282 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + ++ + + + +P + +Y L ++ L A L + S + + ++ +++ Sbjct: 283 KNLVYRTLRKDFNPRLIELYAMLPADEHQ--LTFAESLLKKKPHSAALYLCLGQLCIKLQ 340 Query: 340 SIDQAHAKAMLAMKIAPRKEIF 361 +A + +I P + Sbjct: 341 LWGKAKYYLEKSNEIEPTPLAY 362 >gi|237801595|ref|ZP_04590056.1| hemY protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024455|gb|EGI04511.1| hemY protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 414 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 137/392 (34%), Gaps = 29/392 (7%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 ++ + +++ + V+ + V I + N Y +S + L++L L + V Sbjct: 6 VLLFIAIVAAALIGVA-VAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAAIRLVIT 64 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 + ++ + + A+ G M +A A++ ++ + L Y Sbjct: 65 LLTTSGGVVNPWSRRNRSRRVQLAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HPLLYY 122 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKA 180 + + A + +Y LE L+ E A+ + GD + A Sbjct: 123 IGAARAANEQGRYEDCDALLERALERQPQAELAI--ALNHAQLQQDRGDTDGALTTLQAM 180 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLI 230 P P V + + Y EWS I + + +K+ + A + L Sbjct: 181 HQRHPHNPQVLRQLQRLYQQRGEWSDLIRLMPELRKDKVLPPKELAELERRAWGENLTLA 240 Query: 231 ARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 A + + S A + + + + A A L + +AE +L Sbjct: 241 AYRDDTDGALTGLPSLEKAWQGLSAAQRQEPQLVQA---YADQLRRLGAEAQAEEVLRVA 297 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K H +A +Y + + + +L+ A + + L+ + +I L+ +A Sbjct: 298 LKREYHSPLARLYGLVRGGDPLKQLQVAEGWLKHHPADPSLLLSLGRICLQGRLWGKARD 357 Query: 347 KAMLAMKI----APRKEIFLLLAQIEQANSHN 374 ++++ E+ LLAQ+ + + N Sbjct: 358 YLESSLRLERNPETCAELARLLAQLGETDRSN 389 >gi|70733283|ref|YP_263057.1| hemY protein [Pseudomonas fluorescens Pf-5] gi|68347582|gb|AAY95188.1| hemY protein [Pseudomonas fluorescens Pf-5] Length = 412 Score = 101 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 128/385 (33%), Gaps = 16/385 (4%) Query: 5 IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRF 64 + VI+ + + ++ +P V I + N Y +S + L+++ + + Sbjct: 6 VIVLLVIAAIGLLGLAIAEHPGYVLIAYSNFRYESSLWATLALVALVWLVVWGIKLLIEL 65 Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124 + ++ + + A+ G M +A A+K + L YL Sbjct: 66 VMVSGGVVNPWSRRNRSRRVQIAIEQGQMDLAEGRWASAQKHLQRAA--EAERQPLLYYL 123 Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDI 183 + A + Y LE L E AV + + GD A + Sbjct: 124 GAARAANEQGHYEECDRLLERALTRQPQAELAVALSHAQLQTDRGDTEGALSTLQAMHER 183 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--------NRNRAILLIARSLE 235 P + V + + + +WS I L + +K+ R L + Sbjct: 184 HPHSVQVLRQLQRLHQQRGDWSALIRLLPELRKDKALPASELQELERRAWGENLSLAARR 243 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPE 294 D+ + S + A + L + A A+ L +AE L K Sbjct: 244 EEDEVAGLQSLNRAWQQLTSAQRQEPQLVLAYAEQLRQLGAGAEAEEALRTAIKRKYESH 303 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +Y + + +L+ A + + + L+ + ++ L+ +A ++++ Sbjct: 304 LARLYGLVRGSDPSRQLQTAEHWLKEHADDPSLLLTLGRLCLQNSLWGKARDYLESSLRL 363 Query: 355 ----APRKEIFLLLAQIEQANSHNT 375 E+ LLAQ+ N Sbjct: 364 QRNPEACAELARLLAQLGDTERSNQ 388 >gi|294787826|ref|ZP_06753070.1| HemY family protein [Simonsiella muelleri ATCC 29453] gi|294484119|gb|EFG31802.1| HemY family protein [Simonsiella muelleri ATCC 29453] Length = 397 Score = 101 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 123/384 (32%), Gaps = 27/384 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M LI + ++ + + +++ H+P DV GN + R + + + L + L Sbjct: 1 MKGLIWIIVLFAIAVGAALLIQHFPGDVYAHVGNYMLRMNLRLFIIGLLLSMVVLYFLIK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-QHTFHNE 119 L+ P + R K AL ++ A + + V H +N Sbjct: 61 FVFGILATPGKMSRFGSSRKSRKAIAALNDAGVAYFEGRYQKAEQEAAKVLANNHAGNNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYA 177 L ++ Q + L M Q+ + L + D +A+ Sbjct: 121 VLALMIAAQSSQKIGNLTKRDSYLRDMEQVLPAKAQLPRYLLLAESAMLRQDYVTAEENL 180 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLE 235 + A + + P + + ++ + + L K + A + + + + Sbjct: 181 SAAAQLDRNLPELLQMQLRLAIAK---DNPLEILESVDKLQKASQLSNEEVLNYRNVAYR 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVN-- 290 + AS A +L+ + + + + A + A W + Sbjct: 238 SLVANAANASQLKA--ALRRIPDEVKSGELCVSIATQYQHLGLYQDAT-----AWVRSYY 290 Query: 291 PH-------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 PH P AN +L + A + + E L+ + ++ + + Sbjct: 291 PHTHYVDLLPIFANSMRYLNDSEQRKSIDIADGWLKSQPKDAELLICLGELCINKQLWGK 350 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQI 367 A ++ I P L LA++ Sbjct: 351 AQGYLEASVAIKPTTRARLALAKV 374 >gi|254490246|ref|ZP_05103436.1| HemY N-terminal domain protein [Methylophaga thiooxidans DMS010] gi|224464593|gb|EEF80852.1| HemY N-terminal domain protein [Methylophaga thiooxydans DMS010] Length = 399 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 141/385 (36%), Gaps = 12/385 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++++ + ++ +FI + P + +GN TS V+ + F L A LL Sbjct: 1 MKVLIIVALALVLGAAFIWAADFEPGFALLQYGNWSLETSLVVLSTAFIFLLVAGYLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 P L + + + +AL GL+++ A ++ + + Sbjct: 61 SVVLVKQSPKRLSAWKQNQRHKRASQALTRGLITLEEGRWAEAERV--LLRHANNSETPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYAT 178 L YL + A + + L + + + AV + + G A Sbjct: 119 LHYLAAARAAQKQHAPDRRDNYLRLAHETTDGADIAV-GVVQAELQLSAGQKEQALATLQ 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAI----LLIARS 233 +++P P+V + + Y +W + L + +K++ E RA+ + Sbjct: 178 HLREVAPKHPYVLQLLQTLYQDMDQWQEVQSVLPDLRKRHVLETAEVRALDQEAAVGQLE 237 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + + + ++ M A LI Q ++ +A ++E+ + N Sbjct: 238 LALSRQEWSKMARVWEKSPARMRQTEAMLRPYVA-GLIKQGEQEQAIELIEQFLRKNWSD 296 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ Y + + + +L A + + K++ L+ + ++A +A +++ Sbjct: 297 QLVYQYGQIAQGDLLKRLAIAEKWLKDKKDNPWLLLTLGRLAKASELWKKAEEYLHASLE 356 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKI 378 R E + LA+++ A + Sbjct: 357 QGARGETYQALAEVQLAEGRHDAAA 381 >gi|77461705|ref|YP_351212.1| HemY-like [Pseudomonas fluorescens Pf0-1] gi|77385708|gb|ABA77221.1| putative HemY domain protein [Pseudomonas fluorescens Pf0-1] Length = 412 Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 59/379 (15%), Positives = 133/379 (35%), Gaps = 15/379 (3%) Query: 1 MLRLIRYFF-VISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M RL F VI+ + ++ + V + + + Y +S + L+++ + Sbjct: 1 MKRLYVIVFLVIAATAALGLAIAEHSGYVLVAYKSFRYESSLWATLAVVAVLWLLVWGIK 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHN 118 A+ L+ ++ + + A+ G + +A A++ ++ + Sbjct: 61 ALVELVLTSGGVVNPWSRRNRSRRVQVAIEHGQLDLAEGRWASAQRHLYRAAEAER---Q 117 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYA 177 L YL + A + Y + LE L+ E A+ + + GD + A Sbjct: 118 PLLYYLGAARAANEQGNYEESDRLLERALERQPQAELAIALSHAQLQTDRGDTDGALVTL 177 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--------KEWNRNRAILL 229 + P + + + +WS I L + +K+ + R L Sbjct: 178 QAMHERHPHNVQTLRQLQRLHQQRGDWSSVIRLLPELRKDKVLPPAELTELERRAWGENL 237 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288 + D + S + A + L A + A A+ L + +AE +L K Sbjct: 238 SLAAHREEDGAVGLQSLNRAWQQLTSAQRQEPALVLAYAEQLRQLGAQVEAEEVLRTALK 297 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +A +Y + + +L+ A + + L+ + ++ L+ +A Sbjct: 298 RKYDSHLARLYGLVRGSDPARQLQTAEGWLKDHPGDASLLLTLGRLCLQASLWGKARDYL 357 Query: 349 MLAMKIAPRKEIFLLLAQI 367 ++++ E LA++ Sbjct: 358 ESSLRVQRNPEACAELARL 376 >gi|261856744|ref|YP_003264027.1| HemY domain protein [Halothiobacillus neapolitanus c2] gi|261837213|gb|ACX96980.1| HemY domain protein [Halothiobacillus neapolitanus c2] Length = 400 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 126/395 (31%), Gaps = 16/395 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R + ++ L + P I +TS +L+++ +++ Sbjct: 1 MKRFVLILIILVLAAGAGFYFIRDPGTADIALLGWDLQTSALGLLALIIVGFIVLAIIWR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V L P++ ++ + + + +A K+ + + Sbjct: 61 VISAVLKLPSLWRRRSARQKQQAADEQVLRAWAELERGRFSVAEKLARTRLNEASL--PP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L Y++ +A+ + L+ + P +F + + +L A Sbjct: 119 LNYVIAADALMAQDETAATLSLLDEVRASFPRFADFLSLHIANRFRQQKNLAPALELLQS 178 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSR------AITFLNQKKKNAKEWNRNRAILLIARS 233 P + A + A +W + A+ L ++ R + Sbjct: 179 LAAAHPKDEAIVCAFAETLFEAADWEKLRTLMPALRRLKWSGLTEQDVQRYDRAVYGGLI 238 Query: 234 LENADKGDMIASYHDAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 E A ++ K D+ ++AS+ A S ++ + +AE ILE Sbjct: 239 QEAARHKQTAELAAIWNDAPKSLRQDDLMLASL--ANSWLTLGQPAEAERILETAQDQQC 296 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV---SKIALEMGSIDQAHAKA 348 P + + + L + + R + + ++ +++A + A Sbjct: 297 TPALLHHWLALPPADPARAIARFNHWAGQSTCQPDKKLLAYANARLAWLNDDTEGAKQAL 356 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 + P L AQI + +T ++Y+T+ Sbjct: 357 APVLGDHPDIPSLKLAAQIAEHERDSTQAVMYYTK 391 >gi|330827975|ref|YP_004390927.1| HemY protein [Aeromonas veronii B565] gi|328803111|gb|AEB48310.1| HemY protein [Aeromonas veronii B565] Length = 387 Score = 98.5 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 122/376 (32%), Gaps = 21/376 (5%) Query: 1 MLRLIRYFFV-ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+R+I V ++ +I S V I GN +S + + F A +++ Sbjct: 1 MIRIIILVAVMVAGLIFG-PQASGNKGYVLIALGNYTIESSVTSAVILAVLFYGALLIVE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + R K + +++A + A K+ + Sbjct: 60 WLLGRVFGLRRKTLGWYGSRRRRKANQQTVAATLAMAEGHYSQAEKLMIKGASN--SDTP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L YL + A A + L + + P + G ++A Sbjct: 118 LLNYLSAAKAAQARGDDARRDQYLQKAQEENPKAELALTLTQTQLQIEQGQYDTALAMLE 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL-------IA 231 ++P P V + + Q ++ ++WS + K K + LL + Sbjct: 178 SVYALNPRHPMVLDQLRQVHLARQDWSALCDLIPALHKVGKLTPKQEEDLLQQAWCGRLQ 237 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + + + + D L+L + C L +A + ++ + P Sbjct: 238 QAAGSLETLKAV--WQDLPRKLRLEPELL---ACYGDLLRQLGADSEAATLWQEALRKQP 292 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++ L ++ L L + + + ++++ L G +D A Sbjct: 293 MPQLLARLPKLKLDSYQPLL----ALLQKQQGQPDVDTALAQLYLLAGQLDDAQKLLEQE 348 Query: 352 MKIAPRKEIFLLLAQI 367 ++ AP + L Q+ Sbjct: 349 VERAPSAAAYHALGQL 364 >gi|322834937|ref|YP_004214964.1| HemY protein [Rahnella sp. Y9602] gi|321170138|gb|ADW75837.1| HemY protein [Rahnella sp. Y9602] Length = 398 Score = 98.1 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 124/390 (31%), Gaps = 21/390 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLR+ F ++ I I++ + V I N TS ++ +L + L+ Sbjct: 1 MLRVFVLFLIVFAGIIVGPILAGHQGYVLIQTDNYNIETSVTGLVIMLIVLIVVLFLIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R L A R K K + ++ +A + K+ + + Sbjct: 61 ILRRVLRTGARTRGWFAGRKSSKARKQTHAAMLKLAEGDHRQMEKLLARNADHA--EQPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172 + YLL + A ++ LE + + TR G++++ Sbjct: 119 VNYLLAAEAAQQRGDDIRTNQYLERAAEIADIDQMPVDITRV-------RIQLARGEVHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---- 228 A+ + L SP P V Q Y+L + + L K + +L Sbjct: 172 ARHGVDRLLGQSPRHPEVLRLAEQAYLLTGAYGSLLEILPSMAKADIHTDDEIRVLQEQA 231 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I + + + + + + + A LI N + A+ ++ K Sbjct: 232 YIGMMNQLMAEEGSEGLKRWWKDQSRKTRHEVALQVAMATHLIECNDQDLAQEVILDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + L S N K +L + N + + ++ ++ G QA Sbjct: 292 RQYDDRLVALMPKLRSGNPEQLEKTLRQLIKQNGTTPLLSSTLGQLLMKHGEWQQASEAF 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 A+K P + LA + Sbjct: 352 REALKQRPDAYDYAWLADALDKLHKPAEAA 381 >gi|295095184|emb|CBK84274.1| hemY protein [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 400 Score = 98.1 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 58/391 (14%), Positives = 115/391 (29%), Gaps = 23/391 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML++ F ++ I +++ + V I N TS ++ IL + + + Sbjct: 2 MLKVFLLFILLIAGIVLGPMLAGHQGYVLIQTDNYNIETSVTGLVIILILGVVVLLAVEW 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119 + R R + K L+ +A + K M Sbjct: 62 LLRRIFRTGVHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMSKNADH---AEQP 118 Query: 120 YLVYLLEVQIALAERQYNIA----HEKLEMMLQIP----ATREFAVYSLYFESCRIGDLN 171 + YLL + A A E+ + P TR + + Sbjct: 119 VVNYLLAAEAAQQRGDEARANQHLERASELSTKDPIPVEITRV-------RLQLARNENH 171 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNRNRAILL 229 +A+ + L+I+P P V Q Y+ W + + K + +R+ L Sbjct: 172 AARHGVDRLLEITPRHPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDELQRL 231 Query: 230 IARSLENADKGD--MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L + + D + + + A+ LI + A+ IL Sbjct: 232 AWIGLMDQARADLGSDGLKTWWKNQSRKTRQQVPLQVAMAEHLIECDDHDTAQEILLDGL 291 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 K + + L + N K + + + + + ++ G +A Sbjct: 292 KRQYDDRLVMVIPRLKTNNPEQIEKALRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLA 351 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 A+K P + LA + Sbjct: 352 FRAALKQRPDAFDYAWLADSLDKQHKPEEAA 382 >gi|312963801|ref|ZP_07778272.1| HemY-like protein [Pseudomonas fluorescens WH6] gi|311281836|gb|EFQ60446.1| HemY-like protein [Pseudomonas fluorescens WH6] Length = 413 Score = 97.3 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 139/396 (35%), Gaps = 28/396 (7%) Query: 1 MLRLIRYFFVISLVICS-FIIVSHYPEDVSITWGNR-LYRTSPFVILSILYFFLFAWILL 58 M R ++ + + + +S + V IT+ + Y +S + L ++ A ++ Sbjct: 1 MKRFYMILVLVIAIALALAVGISKHTGYVLITYPHVLHYESSLWATLVAVFAIGLAIYVI 60 Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFH 117 + + ++ + + A+ G M +A A + +H + Sbjct: 61 RLLLSLVTTSGGVVNPWSRRNRSRRVQIAIEQGQMDLAEGRWASAERHLHRAAEAER--- 117 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176 L YL + A + +Y + LE L+ E AV + + GD + A Sbjct: 118 QPLLYYLGAARAANEQGRYEESDGLLERALERQPQAELAVALSHAQLQLDRGDTDGALVT 177 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILL 229 + P V + + + +WS I L + +K+ E R Sbjct: 178 LQAMHERHPHNAQVLRQLQRLHQQRGDWSSVIRLLPELRKDKVLPAGELAELERRAWGEN 237 Query: 230 IARSLENADKGDM-----IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-IL 283 ++ + + ++G+ ++ + + ++A + L + K +A L Sbjct: 238 LSLAAQREEQGEAGLQSLERAWQQLTSAQRQEPQLVLAYAEQLRQLGADAKAEEALRGAL 297 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ + + + +Y L + +LK A + + L+ + ++ L+ + Sbjct: 298 KRSYDSH----LIRLYGLLRGSDPTRQLKFAEGWLKDHPGDASLLLTLGRLCLQNSLWGK 353 Query: 344 AHAKAMLAMKI----APRKEIFLLLAQIEQANSHNT 375 A ++++ E+ LLAQ+ N Sbjct: 354 ARDYLESSLQVQRNPEACAELARLLAQLGDTERSNQ 389 >gi|37678262|ref|NP_932871.1| uncharacterized enzyme of heme biosynthesis [Vibrio vulnificus YJ016] gi|37197001|dbj|BAC92842.1| uncharacterized enzyme of heme biosynthesis [Vibrio vulnificus YJ016] Length = 393 Score = 96.5 bits (239), Expect = 8e-18, Method: Composition-based stats. Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 19/397 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N S ++ + L L Sbjct: 1 MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFIVAALAGLFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L ++ R + + G++ + + A K + + H Sbjct: 61 LVKKVLYTGFTTWNWFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWASHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + + AV S + R G+ A Sbjct: 119 LCYLVASEAADGQGDKAK-RDHYLALAAEQENAYLAVELTRS--KQLVREGEFAQAFDSL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARS 233 P+ P V + Y+ K W I L Q + ++ + Sbjct: 176 QSLKGRYPNNPIVLNLLKTTYLELKLWQPLIDLLPTLNKQALISPEDAEQMHQRAQCGLL 235 Query: 234 LENADKGDMIASYHDAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + A + +K + + C AK LI++ +A ++++ K + Sbjct: 236 ADVAGQQGSEGLIKHWNTLPRKVKQDPHLV---ACFAKQLIARKADHEALTVIKEALKKS 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P PE+ + L + + + + + + E+ ++++ G QA + Sbjct: 293 PSPELYALLPQLNLSDVHPVIVMLEQNVKNDNHNAEAHSALAQLYFREGKWPQAQSHFET 352 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 A+K+ + LA + + N ++ AL Sbjct: 353 ALKVRSSVSDYAFLADALEKQNLNKA-AHEVSRKALT 388 >gi|320154941|ref|YP_004187320.1| HemY-like protein [Vibrio vulnificus MO6-24/O] gi|319930253|gb|ADV85117.1| HemY-like protein [Vibrio vulnificus MO6-24/O] Length = 393 Score = 96.5 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 19/397 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N S ++ + L L Sbjct: 1 MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFIVAALAGLFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L ++ R + + G++ + + A K + + H Sbjct: 61 LVKKVLYTGFTTWNWFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWASHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + + AV S + R G+ A Sbjct: 119 LCYLVASEAADGQGDRAK-RDHYLALAAEQENAYLAVELTRS--KQLVREGEFALAFDSL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARS 233 P+ P V + Y+ K W I L Q + ++ + Sbjct: 176 QSLKGRYPNNPIVLNLLKTTYLELKLWQPLIDLLPTLNKQALISPEDAEQMHQRAQCGLL 235 Query: 234 LENADKGDMIASYHDAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + A + +K + + C AK LI++ +A ++++ K + Sbjct: 236 ADVAGQQGSEGLIKHWNTLPRKVKQNPHLV---ACFAKQLIARKADHEALTVIKEALKKS 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P PE+ + L + + + + + + E+ ++++ G QA + Sbjct: 293 PSPELYALLPQLNLSDVHPVIVMLEQNVKNDNHNAEAHSALAQLYFREGKWPQAQSHFET 352 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 A+K+ + LA + + N ++ AL Sbjct: 353 ALKVRSSVSDYAFLADALEKQNLNKA-AHEVSRKALT 388 >gi|78484460|ref|YP_390385.1| HemY-like [Thiomicrospira crunogena XCL-2] gi|78362746|gb|ABB40711.1| HemY-like [Thiomicrospira crunogena XCL-2] Length = 391 Score = 96.5 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 130/388 (33%), Gaps = 21/388 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M +++++ F + + + + VS+ W + + TS L+ + + LL Sbjct: 1 MSKILKWSFFLLIATGLTSLALYDNGQVSMVWNDWVIETSLSFALAAVVVIFGSVYLLMR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + + Y+K ++ GL+++ + +A K +++Q + Sbjct: 61 LLISVWHFPAYWRNRQQLKRYNKAETSISKGLIALEYGDWQMAEKHLIKMAKQ---SDAG 117 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFES-CRIGDLNSAQRY 176 L++ L A A + E L R Y L + A Sbjct: 118 LIHYLTA--AKMAHN-QGALTRREQYLNEARKRFPQDYVTIGLVESRLLANEQPDMALVI 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + +P + VQ K+W L Q KK L I Sbjct: 175 LAELHQQNPKNRPILSEYVQLLEQQKQWQTLEGLLGQIKKIRAMDKAALQALEIRLIAGK 234 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK---AEVILE---KIWKVN 290 K + + +SL + A I A ++ AE+I++ K W Sbjct: 235 VAKAENLDVLDTLWKSLSAKQQLMPA-ILAEFVEQRMGWGKEQGLAELIVKSVSKQWDDR 293 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + Y + +LKRA + + ++ L+ + ++A QA Sbjct: 294 ----LVYQYGRIELGPAFERLKRAEKWLKGQDDNPVLLLTLGRLACMSQLWGQAKHYFQQ 349 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKI 378 ++ + P E F LA+ +A T Sbjct: 350 SLTLQPELETFHALAKCYEAEGLETQAA 377 >gi|27364540|ref|NP_760068.1| HemY-like protein [Vibrio vulnificus CMCP6] gi|27360659|gb|AAO09595.1| HemY-like protein [Vibrio vulnificus CMCP6] Length = 393 Score = 96.2 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 19/397 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N S ++ + L L Sbjct: 1 MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFIVAALAGLFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L ++ R + + G++ + + A K + + H Sbjct: 61 LVKKVLYTGFTTWNWFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + + AV S + R G+ A Sbjct: 119 LCYLVASEAADGQGDKAK-RDHYLALAAEQENAYLAVELTRS--KQLVREGEFALAFDSL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARS 233 P+ P V + Y+ K W I L Q + ++ + Sbjct: 176 QSLKGRYPNNPIVLNLLKTTYLELKLWQPLIDLLPTLNKQALISPEDAEQMHQRAQCGLL 235 Query: 234 LENADKGDMIASYHDAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + A + +K + + C AK LI++ +A ++++ K + Sbjct: 236 ADVAGQQGSEGLIKHWNTLPRKVKQDPHLV---ACFAKQLIARKADHEALTVIKEALKKS 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P PE+ + L + + + + + + E+ ++++ G QA + Sbjct: 293 PSPELYALLPQLNLSDVHPVIVMLEQNVKNDNHNAEAHSALAQLYFREGKWPQAQSHFET 352 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 A+K+ + LA + + N ++ AL Sbjct: 353 ALKVRSSVSDYAFLADALEKQNLNKA-AHEVSRKALT 388 >gi|254508815|ref|ZP_05120926.1| HemY protein [Vibrio parahaemolyticus 16] gi|219548272|gb|EED25286.1| HemY protein [Vibrio parahaemolyticus 16] Length = 392 Score = 96.2 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 130/382 (34%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R+I F ++ + + + V I+ N+ S ++ + L L Sbjct: 1 MFRIIFLFVILGAGLFAGTQYAGQQGYVLISIANKTIEMSVTTLVIFIIAALATLFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + LS + ++ R + + G++ + + LA K + + H Sbjct: 61 FIKKALSASSATWNWFSVRKMRRSRRYTNEGIIKLLEGDFKLAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + ++ + AV + R D +A Sbjct: 119 LCYLVASEAAQGMGESDK-RDRYLELASQQENSLLAVELTR--AKQQVRESDFTAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------LI 230 T P V + Y+ K W + L K +A L L+ Sbjct: 176 TTLKASYPTNTIVLNLLKSVYIELKLWQPLLDALPNLVKAKIISKDEQAQLTQRAQCGLL 235 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A E +++ +++ LK + + C AK LIS+ +A ++++ K + Sbjct: 236 AEVAEQKGSEGLVSHWNNLPRKLKSDSHLVE---CFAKQLISRKADNEAFTLIKENIKKH 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P+ + + + ++ + + + + E+ +++ L +A Sbjct: 293 PNSSLYALLPEMNLADSHPAIVFLETVLNKDGNNAEAHSALAQFHLRNEKWSEAQQHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + P + LA + + Sbjct: 353 ALSLRPNVSDYAYLADALEKQN 374 >gi|300115113|ref|YP_003761688.1| HemY domain-containing protein [Nitrosococcus watsonii C-113] gi|299541050|gb|ADJ29367.1| HemY domain protein [Nitrosococcus watsonii C-113] Length = 430 Score = 95.0 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 138/396 (34%), Gaps = 17/396 (4%) Query: 2 LRLIRYFFVISLVICSFIIVS-HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++ + + ++ ++ +++ + I +G + T+ + + +L L Sbjct: 1 MKAVIFGLIVLILAAGLELLTHDDSGYLVIGYGQWMIETTLTLAVIVLGLAFIGGYLALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 P L +R + K L GL+ I N A + + V + Sbjct: 61 FISHIGKTPRRLGKTRQRRRSSRASKMLIEGLIDIEEGNWDRAER--ALVKDIAYSNTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYAT 178 L Y+ + A + Y + + + PA + G A Sbjct: 119 LNYIAAARSAQNQGAYER-RDHYLRLAREAVPAATFAVELTQAELQVNSGQFEQALAILN 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAIL---LIA 231 + P + Y+ ++W++ + L ++ N +E + + L+ Sbjct: 178 HLRTLDPRHSQPLRLLKSLYLQQRDWNQLLGLLPQLCKRRLVNKEEAHSLEVMAHVELLQ 237 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +N +I + + + A + A LI +N++ AE +L+ K N Sbjct: 238 EAAQNESDAALIDRWKAVPNRFRKHPKIVAAYVYA---LIDRNEQDLAEQLLQDTLKGNW 294 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+ +Y + S + V +L RA + L+ + ++A G +A + Sbjct: 295 SDELIYLYGLVQSSDLVAQLARAEAWLSQQGNNPWLLLTLGRLAQHNGLWGKARQYLETS 354 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + APR E + L ++ + +++ L L Sbjct: 355 IAYAPRSEAYRELGKVLE-EIGDSEAALECYSKGLS 389 >gi|121997819|ref|YP_001002606.1| HemY domain-containing protein [Halorhodospira halophila SL1] gi|121589224|gb|ABM61804.1| HemY domain protein [Halorhodospira halophila SL1] Length = 441 Score = 95.0 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 62/388 (15%), Positives = 126/388 (32%), Gaps = 17/388 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL Y +++ + + + + V ++ G S +L + L A Sbjct: 1 MRRLFIYLLILAGAVLTALYFNQQEGYVMLSIGPWRLEMSLLFSAVVLGLLVLLLYLALA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 S P L +R + L +GL+ A + A + + +++ Sbjct: 61 ALGRLWSMPRRLRSWQGQRRQESARTELTSGLLRFAEGDYDTAEQQLVHSARR---SEAP 117 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRI-GDLNSAQRYAT 178 LV L IA R + + AV L + G AQ + Sbjct: 118 LVNYLTAAIAAQRRGAREVRDGYLTTAEKSGPDANLAVRLLQAQLQAESGQWEEAQASVS 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 LD P E +V +W R L + ++ L + E Sbjct: 178 AVLDKEPKHRRALELMVGCCRALGDWERLEPLLPRIERQGILPKNELTELNRWVARERLA 237 Query: 239 KG---DMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D A E L+ + I + + L + + + A +++K + Sbjct: 238 QAAGEDTQALQEAWRELSRGLRKDPDVICSYV---DGLTTLGEVQSAVELIQKQLHKEWN 294 Query: 293 PEIANIYTHLLSENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 P++ Y L +++ +L++A E +++ ++L +AL+ ++ Sbjct: 295 PDLLQRYARLPADDIDTYAARLEKAEGWIEAHRDDPKALYAAGVLALQAEQWERGRDYLQ 354 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDK 377 A+ R E L +++ Sbjct: 355 AAVDQTARPEYLRTLGALQEHLGDYDGA 382 >gi|226326703|ref|ZP_03802221.1| hypothetical protein PROPEN_00556 [Proteus penneri ATCC 35198] gi|225204924|gb|EEG87278.1| hypothetical protein PROPEN_00556 [Proteus penneri ATCC 35198] Length = 388 Score = 94.2 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 131/379 (34%), Gaps = 23/379 (6%) Query: 1 MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ML+++ + +I+ +I +++ + V I + TS ++ + A +L+ Sbjct: 1 MLKILLLFVVLIAGIIFG-PLLAGHQGYVLIQTDDWDIETSVTSLVIMFVLLQLALLLIG 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 R F+ + + R ++ K LM +A + K+ S + Sbjct: 60 WSYRRFIGTGSKAYSWFSFRKRNRARKQTSMALMKLAEGDFKEVEKLMSRNA--DYAEQP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQ 174 + YLL + A + LE ++ T V L + + ++A+ Sbjct: 118 VVNYLLAAEAAQQRGDEFRVQQHLERAAELADTNQLPVDITRVRILLAQ----NENHAAR 173 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------RNRAIL 228 + L+ +P P V Y W + + +K A + R +A + Sbjct: 174 TGVDELLNQAPRHPEVLRLAETAYTRTAAWQALLDIIPSMQKIALHTDDELAQLRQKAYI 233 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIW 287 I + + D + ++ + A + A+ LI N A+ I+ Sbjct: 234 GIMGQKMSENGCD---GLKNWWKAQPRKVHHDNALRVVLAEHLIECNDPDSAQTIILDGI 290 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 K + + L + + LK L + + + + +IA++ G QA Sbjct: 291 KRQYDERLILLLPRLKNTDASVILKVLNSLIKQHGPTPLLNSTLGQIAMQQGQWGQAEEA 350 Query: 348 AMLAMKIAPRKEIFLLLAQ 366 A+K P F LA Sbjct: 351 FRNALKQRPDVHDFAWLAD 369 >gi|328472408|gb|EGF43274.1| HemY protein [Vibrio parahaemolyticus 10329] Length = 393 Score = 94.2 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 121/380 (31%), Gaps = 14/380 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + + S V I+ N+ S ++ + L LL Sbjct: 1 MIRLIFLFVVLGAGLFAGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIAALAGLFLLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + G++ + + A K + + H Sbjct: 61 LIKKLVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + + AV + R + +A Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLALASQQENAHLAVELTR--AKQFIRDNEFEAAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 P+ V + Y+ K W I + Q K +A L+ Sbjct: 176 QSLKGQYPNNSIVLNLLKTTYMQLKLWQPLIDLMPQLAKAKLVTEEEQAELIQKAQCGLL 235 Query: 238 DKGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + I + K+ ++ + + A + + + +A +L++ K P Sbjct: 236 HEVAQQQGSEGLISHWNSLARKVRQDTHLIACFARELIARKADT-EAFTVLKEALKKQPE 294 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 PE+ + L + + + + ++ + ++ QA +A+ Sbjct: 295 PELYQLLPDLNLPDIHPVVVFLEGVVKKEADNAAAHSALAHFYFRQEKWQQAQEHFEIAL 354 Query: 353 KIAPRKEIFLLLAQIEQANS 372 K+ + LA + + Sbjct: 355 KLRSDVSDYAFLADTLEKQN 374 >gi|206580430|ref|YP_002241135.1| HemY protein [Klebsiella pneumoniae 342] gi|288937775|ref|YP_003441834.1| HemY protein [Klebsiella variicola At-22] gi|290513170|ref|ZP_06552532.1| hemY protein [Klebsiella sp. 1_1_55] gi|206569488|gb|ACI11264.1| HemY protein [Klebsiella pneumoniae 342] gi|288892484|gb|ADC60802.1| HemY protein [Klebsiella variicola At-22] gi|289774381|gb|EFD82387.1| hemY protein [Klebsiella sp. 1_1_55] Length = 398 Score = 93.5 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE ++ + TR + ++A+ K L+I+P P V Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248 Q Y W + + K +RA L + DK G Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEEHRAALEQLAWVGLMDKALADGGSEGLREW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WRNQSRKTRALVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + + G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHQPEEAA 381 >gi|238892402|ref|YP_002917136.1| putative protoheme IX biogenesis protein [Klebsiella pneumoniae NTUH-K2044] gi|238544718|dbj|BAH61069.1| hypothetical protein KP1_0160 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 398 Score = 93.5 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE ++ + TR + ++A+ K L+I+P P V Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248 Q Y W + + K +RA L + DK G Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEAHRAALEQLAWVGLMDKALADGGSEGLREW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WRNQSRKTRALVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + + G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHQPEEAA 381 >gi|197287142|ref|YP_002153014.1| protoheme IX biogenesis protein [Proteus mirabilis HI4320] gi|227357165|ref|ZP_03841534.1| possible porphoryin biosynthesis protein HemY [Proteus mirabilis ATCC 29906] gi|194684629|emb|CAR46529.1| putative porphyrin biosynthesis protein [Proteus mirabilis HI4320] gi|227162697|gb|EEI47664.1| possible porphoryin biosynthesis protein HemY [Proteus mirabilis ATCC 29906] Length = 409 Score = 93.5 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 64/394 (16%), Positives = 134/394 (34%), Gaps = 27/394 (6%) Query: 1 MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M +++ + +I+ +I + ++ + V I N TS ++ + +LL Sbjct: 1 MFKILLLFVVLIAGIIFGPV-LAGHQGYVFIQTDNWDIETSVTSLVIMFVLLQLILLLLG 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 R F+ + + R + K LM +A + K+ S + Sbjct: 60 WCYRRFIGTGSKAYSWFSLRKRSRARKQTRLALMKLAEGDFKQVEKLMSRNA--DYAEQP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQ 174 + YLL + A + LE ++ T V L + + ++A+ Sbjct: 118 VVNYLLAAEAAQQRGDEFRVQQHLERASELADTNQLPVDITRVRILLAQ----NENHAAR 173 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------RNRAIL 228 + L+ P P V Y+ + W + + +K A + R +A + Sbjct: 174 TGVDELLNQVPRHPEVLRLAETAYIRTEAWQALLDIIPSMQKIALHTDDELEQLRQQAYI 233 Query: 229 LIARSLENADKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + + + D + ++ A + A+ LI N + A+ I+ Sbjct: 234 GLMGQKMSENGCDGLKNWWKAQPRKIQHDNGLRFV-----LAEHLIECNDPQTAQTIILD 288 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + + + L + + LK L + + + V +IA++ G QA Sbjct: 289 GIKRHYDERLILLLPRLKNSDPDSILKVLNSLIKQHGPTPLLNSTVGQIAMQQGQWAQAE 348 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+K P F LA + + + + Sbjct: 349 TAFRNALKQRPDVHDFAWLADVLDKQNKSVESAK 382 >gi|28899765|ref|NP_799370.1| HemY protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365167|ref|ZP_05777732.1| HemY protein [Vibrio parahaemolyticus K5030] gi|260878133|ref|ZP_05890488.1| HemY protein [Vibrio parahaemolyticus AN-5034] gi|260895810|ref|ZP_05904306.1| HemY protein [Vibrio parahaemolyticus Peru-466] gi|260900857|ref|ZP_05909252.1| HemY protein [Vibrio parahaemolyticus AQ4037] gi|28808017|dbj|BAC61254.1| HemY protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087172|gb|EFO36867.1| HemY protein [Vibrio parahaemolyticus Peru-466] gi|308092785|gb|EFO42480.1| HemY protein [Vibrio parahaemolyticus AN-5034] gi|308110581|gb|EFO48121.1| HemY protein [Vibrio parahaemolyticus AQ4037] gi|308111031|gb|EFO48571.1| HemY protein [Vibrio parahaemolyticus K5030] Length = 393 Score = 93.5 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 122/380 (32%), Gaps = 14/380 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N+ S ++ + L LL Sbjct: 1 MIRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIATLAGLFLLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + G++ + + A K + + H Sbjct: 61 LIKKLVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + + AV + R + +A Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLALASQQENAHLAVELTR--AKQFIRDNEFEAAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 P+ V + Y+ K W I + Q K +A L+ Sbjct: 176 QSLKGQYPNNSIVLNLLKTTYMQLKLWQPLIDLMPQLAKAKLVTEEEQAELIQKAQCGLL 235 Query: 238 DKGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + I + K+ ++ + + A+ LI++ +A +L++ K P Sbjct: 236 HEVAQQQGSEGLISHWNSLARKVKQDTHLIACF-ARDLIARKADTEAFTVLKEALKKQPE 294 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 PE+ + L + + + + ++ + ++ QA +A+ Sbjct: 295 PELYQLLPDLNLPDIHPVVVFLEGVVKKEADNAAAHSALAHFYFRQEKWQQAQEHFEIAL 354 Query: 353 KIAPRKEIFLLLAQIEQANS 372 K+ + LA + + Sbjct: 355 KLRSDVSDYAFLADTLEKQN 374 >gi|262040888|ref|ZP_06014114.1| porphoryin biosynthesis protein HemY [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041777|gb|EEW42822.1| porphoryin biosynthesis protein HemY [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 398 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAKAAQQRGDEARAN 138 Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE ++ + TR + ++A+ K L+I+P P V Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248 Q Y W + + K +RA L + DK G Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEAHRAALEQLAWVGLMDKALADGGSEGLREW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WRNQSRKTRALVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + + G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHQPEEAA 381 >gi|153214862|ref|ZP_01949670.1| hemY protein [Vibrio cholerae 1587] gi|124115105|gb|EAY33925.1| hemY protein [Vibrio cholerae 1587] Length = 398 Score = 93.1 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A + + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQHLEITAQRGIL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ LK +M I LI + +A ++++ K Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|330812533|ref|YP_004356995.1| heme biosynthesis protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380641|gb|AEA71991.1| putative heme biosynthesis protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 415 Score = 92.7 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 69/391 (17%), Positives = 140/391 (35%), Gaps = 19/391 (4%) Query: 1 MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M RL + F VI+ + ++ + V + + N Y +V L+++ W L Sbjct: 1 MKRLYVILFVVIAAAALLGVAIAEHSGYVLVAYKNFRYEAGLWVTLALVAVLWLLWRGLR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHN 118 A+ + ++ + + A+ G + +A A++ +H + Sbjct: 61 ALIGLVTTSSGVVNPWSRRNRSRRVQVAIEHGQLDLAEGRWASAQRHLHRAAEAER---Q 117 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYA 177 L YL + A + Y + LE L+ E A+ + + GD + A Sbjct: 118 PLLYYLGAARAANEQGLYEQSDSLLERALERQPQAELAIALTHAQLQTDRGDTDGALTTL 177 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------L 229 + P V + + + +WS I L + +K+ A L L Sbjct: 178 QAMHERHPHNVQVLRQLQRLHQQRGDWSALIRLLPELRKDKVLPPAELAELERRAWGENL 237 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288 + D + S + A + L A + A A+ L + +AE +L K Sbjct: 238 TLAAHREEDGSVGLQSLNRAWQQLTSAQRQESALVLAYAEQLRQLGAQVEAEEVLRSALK 297 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + +A +Y + + V +L+ A + + L+ + ++ L+ +A Sbjct: 298 RHYDSHLARLYGLVRGNDPVRQLQTAEGWLKDHPADPSLLLTLGRLCLQSSLWGKARDYL 357 Query: 349 MLAMKI----APRKEIFLLLAQIEQANSHNT 375 ++++ E+ LLAQ+ A N Sbjct: 358 ESSLRVQRNPEACAELARLLAQLGDAERSNQ 388 >gi|149928340|ref|ZP_01916581.1| putative enzyme of heme biosynthesis [Limnobacter sp. MED105] gi|149822925|gb|EDM82170.1| putative enzyme of heme biosynthesis [Limnobacter sp. MED105] Length = 396 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 48/362 (13%), Positives = 109/362 (30%), Gaps = 10/362 (2%) Query: 28 VSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKA 87 V I +G S ++ + ++ R P R + +A Sbjct: 28 VLIFFGQYRIDMSLNFAVAAILLLFLVLYVMMRAWRASSQLPGKFKEYWMNRKQNALLRA 87 Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL---E 144 GL+++ + A K + S+ + L YL+ A+ +Y++A E L + Sbjct: 88 NTQGLIALITGDEQGAHKALNQASKTGIETD--LSYLIRAMSAMQADRYDVAEEILNQEK 145 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + + + + D + A ++ P V + + W Sbjct: 146 AKVGEHSHALVVLRG--KVALSKQDFSGALGMLEAMDPLAAKLPQVQRLRMLALMGLGRW 203 Query: 205 SRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A+ +N A++ I L D + + ++ Sbjct: 204 QDALVQYRACVAVSALTNGEKNEALMRIYAGLGENAGQDASKMQEVLSNAKPVELENVGV 263 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 A L+ A +LE N + ++ +Y + L RL + Sbjct: 264 LRMLATGLLRTGLITAARTLLETALNQNYNKDLLPVYHQVSVLEPREALPNVERLLAQHP 323 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 + L + + + +A ++ P + L ++ +A + ++ W Sbjct: 324 ADLRLLELAADVCEREQLWGKAISRFEAVYAKQPSAHVAGKLERLYEAANQG-ERAKAWR 382 Query: 383 QS 384 + Sbjct: 383 EK 384 >gi|254291926|ref|ZP_04962707.1| hemY protein [Vibrio cholerae AM-19226] gi|150422136|gb|EDN14102.1| hemY protein [Vibrio cholerae AM-19226] Length = 398 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A + + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPRLVKAKRLSNEEAQQLEITAQRGIL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ LK +M I LI + +A ++++ K Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 ATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|269964922|ref|ZP_06179092.1| hemY protein [Vibrio alginolyticus 40B] gi|269830398|gb|EEZ84622.1| hemY protein [Vibrio alginolyticus 40B] Length = 393 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 121/386 (31%), Gaps = 26/386 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RLI F V+ + S V I+ + S ++ + L LL Sbjct: 1 MFRLIFLFVVLGAGLFVGTQFSGQQGYVLISIAEKTIEMSVTTLVVFVIAALAGLFLLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + G++ + + A K + + H Sbjct: 61 LIKKLVYASSTTWNYFSVRKMRHSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L YL+ + A + + + AV L I D A Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLELASQQENAHLAVE-LTRAKQFIRDNE-----FESA 171 Query: 181 LD--ISPDAPWVTEA-VVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 D S + + + + V+ Y+ K W I L Q K + A L+ Sbjct: 172 FDTLQSLKSQYASNSIVLNLLKTTYMQLKLWQPLIDLLPQLTKAKLISDEEHAELIQKAQ 231 Query: 234 LENADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + I +K + + C A+ LI++ +A +L++ Sbjct: 232 CGLLHEVAQQQGSEGLISHWNSLSRKVKQDTHLV---ACFARELITRKADAEAFTVLKEA 288 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K P PE+ + L +T + + + ++ + ++ +A Sbjct: 289 LKKQPAPELYQLLPDLNLPDTHPVVVFLEGVVKKEPDNAAAHSALAHFYFRQEKWQEAQD 348 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANS 372 +A+K+ + LA + + Sbjct: 349 HFEIALKLRSDVSDYAFLADTLEKQN 374 >gi|153826289|ref|ZP_01978956.1| hemY protein [Vibrio cholerae MZO-2] gi|153830627|ref|ZP_01983294.1| hemY protein [Vibrio cholerae 623-39] gi|229515849|ref|ZP_04405307.1| HemY-like protein [Vibrio cholerae TMA 21] gi|148873899|gb|EDL72034.1| hemY protein [Vibrio cholerae 623-39] gi|149739957|gb|EDM54136.1| hemY protein [Vibrio cholerae MZO-2] gi|229347112|gb|EEO12073.1| HemY-like protein [Vibrio cholerae TMA 21] gi|327483018|gb|AEA77425.1| HemY protein [Vibrio cholerae LMA3894-4] Length = 398 Score = 92.3 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A + + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ LK +M I LI + +A ++++ K Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 ATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|229527141|ref|ZP_04416535.1| HemY-like protein [Vibrio cholerae 12129(1)] gi|229335372|gb|EEO00855.1| HemY-like protein [Vibrio cholerae 12129(1)] Length = 398 Score = 91.9 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 59/383 (15%), Positives = 115/383 (30%), Gaps = 20/383 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRY 176 L YL+ + A ++ + AV + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDRYLALAAQQNNSTLAVELTR--AKQQLSDGDNQAALET 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 T+ P V + Q Y EW + L + K + N L I Sbjct: 175 LTQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEVQQLEITAQRGI 234 Query: 237 ADKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ LK +M I LI + +A ++++ K Sbjct: 235 LQDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKK 291 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PE+ + L + + + + E+ + ++ L A Sbjct: 292 QATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLRDKHWADAQKHLE 351 Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 352 KALSLRSSVSDYAYLADALEKQN 374 >gi|152972790|ref|YP_001337936.1| putative protoheme IX biogenesis protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|329997500|ref|ZP_08302802.1| hemY protein [Klebsiella sp. MS 92-3] gi|150957639|gb|ABR79669.1| hypothetical protein KPN_04301 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328539068|gb|EGF65107.1| hemY protein [Klebsiella sp. MS 92-3] Length = 398 Score = 91.9 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE ++ + TR + ++A+ K L+I+P P V Sbjct: 139 QHLERATELAGDDLIPVEITRV-------RLQLARNENHAARHGIDKLLEITPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----GDMIASYHD 248 Q Y W + + K +RA L + DK G Sbjct: 192 LAEQAYTRTGAWQSLLDIIPSMAKANVGDEAHRAALEQLAWVGLMDKALADGGSEGLREW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WRNQSRKTRAMVPLQVAMAERLIESDDHDTAQQIIIDGLKKQYDDRLVMPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + + G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKAVGDRPLLWSTLGQSLMRHGEWQEASIAFRAALKQRPDAFDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHQPEEAA 381 >gi|77164033|ref|YP_342558.1| HemY-like [Nitrosococcus oceani ATCC 19707] gi|254435079|ref|ZP_05048586.1| HemY N-terminal domain protein [Nitrosococcus oceani AFC27] gi|76882347|gb|ABA57028.1| HemY-like protein [Nitrosococcus oceani ATCC 19707] gi|207088190|gb|EDZ65462.1| HemY N-terminal domain protein [Nitrosococcus oceani AFC27] Length = 427 Score = 91.9 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 66/402 (16%), Positives = 137/402 (34%), Gaps = 16/402 (3%) Query: 2 LRLIRYFFVISLVICSFIIVS-HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++ + + ++ ++ +++ + I +G + T+ + + +L L Sbjct: 1 MKAVIFGLIVLILAIGLELLTHDDSGYLVIGYGQWMIETTLTLAVIVLGLIFIGGYLALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 P L +R + K L GL+ I N A + + V + Sbjct: 61 FVSHIGKAPRRLGESRQRRRSSRASKMLIEGLIDIEEGNWDRAER--ALVKDIAYSNTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYAT 178 L Y+ + A + Y + + + L + G A Sbjct: 119 LNYIAAARSAQNQGAYER-RDHYLHLAREAVPAATFAIELIQAELQVNSGQFEEALAILN 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P P + + Y+ ++W + + L Q K L + +E Sbjct: 178 HLRTLDPRHPQPLKLLKSLYLQQRDWDQLLGLLLQLCKRRLVSKEEAHSLEVMAHVELLQ 237 Query: 239 KGDMIASYHDAIESLKLCDNS------IMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + S I+ K N I+A+ A LI +N+ AE +L+ K N Sbjct: 238 EAAQSESNAALIDRWKAVPNRFRKHPKIVAAYVYA--LIDRNEHDLAEQLLQDTLKGNWS 295 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E+ +Y + S + V +L RA ++ L+ + ++A G +A ++ Sbjct: 296 DELIYLYGLVQSSDLVAQLTRAEAWLSQQGDNPWLLLTLGRLAQYNGLWGKARQYLETSI 355 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393 APR E + L ++ + +++ L L A + Sbjct: 356 AYAPRSEAYHELGKVLE-EIGDSEAALECYSKGLSMATRGAV 396 >gi|254226595|ref|ZP_04920176.1| hemY protein [Vibrio cholerae V51] gi|125620867|gb|EAZ49220.1| hemY protein [Vibrio cholerae V51] Length = 398 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A + + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ LK +M I LI + +A ++++ K Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|262273220|ref|ZP_06051036.1| HemY-like protein [Grimontia hollisae CIP 101886] gi|262222798|gb|EEY74107.1| HemY-like protein [Grimontia hollisae CIP 101886] Length = 395 Score = 91.5 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 123/397 (30%), Gaps = 17/397 (4%) Query: 1 MLRLIRYFFVISLVICSFII--VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILL 58 M++++ VI+L+ + ++ V I+ N+ S ++ ++ F A +L Sbjct: 1 MIKIL--LLVIALIAGLVVGPDLAGNQGYVLISAANQTIEMSVSTLVILVVFAFAALFIL 58 Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118 + R S + R K GL+ + + + K+ + + Sbjct: 59 EWLIRKLFSLSSSTRGWFSGRKNKKARMLTNEGLLKLLEGDWKQSEKL--LLKGVNHSDA 116 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRY 176 L YL + A + ++ A +L R G A Sbjct: 117 PLLNYLAAAEAAQGRGDIDN-RDRYLQQAADFGIDNLAT-ALTRAKLQYRQGQYEEALAS 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIAR 232 +D +P P + + Y+ ++W + + K + E R Sbjct: 175 LQGLVDANPRNPVLLSLLKDTYLKLQDWQALLRLMPSLKRVKAVSEAEAERLELKAECGL 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 A + + C K LI++ +A +IL + K +P Sbjct: 235 MAHIATQKGSDGLLAHWNSLSRSARQQPKLIGCLVKQLIARKADSEAYIILRENLKKHPD 294 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + ++ L + + + + N+ + + + ++ G +A A+ Sbjct: 295 ESLISLVPELSLPDYHPAILKLQDVLRYNENNPVTHSALGQLYFREGKWAEARTHFEKAL 354 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDK---ILYWTQSAL 386 I P + L + + + + AL Sbjct: 355 DIRPDVSDYAWLVDTLEKLNDPSAANHLSREALKLAL 391 >gi|119475321|ref|ZP_01615674.1| uncharacterized enzyme of heme biosynthesis [marine gamma proteobacterium HTCC2143] gi|119451524|gb|EAW32757.1| uncharacterized enzyme of heme biosynthesis [marine gamma proteobacterium HTCC2143] Length = 407 Score = 91.5 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 129/365 (35%), Gaps = 19/365 (5%) Query: 25 PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84 P + I++G+ +S ++ L + F F F+V R ++ + L L R + + Sbjct: 26 PGYLLISYGHYTVESSVWIGLGVFLLFFFMIYGFFSVLRRTINGGSALSGWLSGRGHRRS 85 Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 K G++S N L+++ S + T L YL+ + + Sbjct: 86 QKQTTKGIISFIEGNWRLSQRTLSRAAA--TSETPLLNYLIAARASHRLGDEKETR-AFL 142 Query: 145 MMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + T L G + T+ + P+V + Q Y Sbjct: 143 KKAEASTTGASNAVGLTQAELQLSSGQFEQSLATLTRVRRNASKQPFVLHLLRQVYEGLN 202 Query: 203 EWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 +W + + + KK++ + ++L A D +E KL Sbjct: 203 DWQALLALIPELKKHSVLSVEKLDDLVLEASQKSLVDAAKTRGVSASQLE--KLWAQLPK 260 Query: 262 ASI-------CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 A++ C A LI+ + +KAE ++ K + + + Y + +++ +L A Sbjct: 261 AAVKNSETVACYADQLIALGEMQKAEKLIRSQLKKDWDRALISRYGKVEADDVAKQLIHA 320 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF----LLLAQIEQA 370 + L+ + +I+L +A ++K+ E++ LLA + + Sbjct: 321 ENWLKERNNDAALLLCLGRISLRNSLWGKAREYFENSLKLEKSAEVYGELARLLAHLGEV 380 Query: 371 NSHNT 375 N Sbjct: 381 EKSND 385 >gi|229525013|ref|ZP_04414418.1| HemY-like protein [Vibrio cholerae bv. albensis VL426] gi|297581841|ref|ZP_06943762.1| hemY protein [Vibrio cholerae RC385] gi|229338594|gb|EEO03611.1| HemY-like protein [Vibrio cholerae bv. albensis VL426] gi|297533935|gb|EFH72775.1| hemY protein [Vibrio cholerae RC385] Length = 398 Score = 91.5 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 116/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A ++ + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ LK +M I LI + +A ++++ K Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|229520091|ref|ZP_04409519.1| HemY-like protein [Vibrio cholerae TM 11079-80] gi|229342879|gb|EEO07869.1| HemY-like protein [Vibrio cholerae TM 11079-80] Length = 398 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A + + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ LK +M I LI + +A ++++ K Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 AAPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|15640149|ref|NP_229776.1| hemY protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587739|ref|ZP_01677500.1| hemY protein [Vibrio cholerae 2740-80] gi|121728284|ref|ZP_01681315.1| hemY protein [Vibrio cholerae V52] gi|147673163|ref|YP_001218301.1| hemY protein [Vibrio cholerae O395] gi|153822310|ref|ZP_01974977.1| hemY protein [Vibrio cholerae B33] gi|227080353|ref|YP_002808904.1| hemY protein [Vibrio cholerae M66-2] gi|229508395|ref|ZP_04397899.1| HemY-like protein [Vibrio cholerae BX 330286] gi|229508924|ref|ZP_04398414.1| HemY-like protein [Vibrio cholerae B33] gi|229517038|ref|ZP_04406484.1| HemY-like protein [Vibrio cholerae RC9] gi|229606668|ref|YP_002877316.1| HemY-like protein [Vibrio cholerae MJ-1236] gi|254851501|ref|ZP_05240851.1| hemY protein [Vibrio cholerae MO10] gi|298501114|ref|ZP_07010914.1| hemY protein [Vibrio cholerae MAK 757] gi|9654517|gb|AAF93295.1| hemY protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548038|gb|EAX58116.1| hemY protein [Vibrio cholerae 2740-80] gi|121629414|gb|EAX61843.1| hemY protein [Vibrio cholerae V52] gi|126520136|gb|EAZ77359.1| hemY protein [Vibrio cholerae B33] gi|146315046|gb|ABQ19585.1| hemY protein [Vibrio cholerae O395] gi|227008241|gb|ACP04453.1| hemY protein [Vibrio cholerae M66-2] gi|227011881|gb|ACP08091.1| hemY protein [Vibrio cholerae O395] gi|229346101|gb|EEO11073.1| HemY-like protein [Vibrio cholerae RC9] gi|229354041|gb|EEO18974.1| HemY-like protein [Vibrio cholerae B33] gi|229354668|gb|EEO19590.1| HemY-like protein [Vibrio cholerae BX 330286] gi|229369323|gb|ACQ59746.1| HemY-like protein [Vibrio cholerae MJ-1236] gi|254847206|gb|EET25620.1| hemY protein [Vibrio cholerae MO10] gi|297540148|gb|EFH76209.1| hemY protein [Vibrio cholerae MAK 757] Length = 398 Score = 91.1 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 119/382 (31%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A ++ + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235 Query: 238 D-----KGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 KG H A S KL +M I LI + +A ++++ K Sbjct: 236 QDIASPKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 ATPELYALLPELNISDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|153803399|ref|ZP_01957985.1| hemY protein [Vibrio cholerae MZO-3] gi|124121056|gb|EAY39799.1| hemY protein [Vibrio cholerae MZO-3] Length = 398 Score = 91.1 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLF 59 M+RLI F V+ L + + V I+ NR S ++ I+ + L F Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEF 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + + + R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTW-NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYA 177 L YL+ + A + + AV L + GD +A Sbjct: 118 LLCYLVASEAANGMGDRAK-RDHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNRAALETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ P V + Q Y EW + L + K + N L I Sbjct: 176 TQLQRNHPHNTVVLNLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGIL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ LK +M I LI + +A ++++ K Sbjct: 236 QDIASQKGSEGLMQHWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PE+ + L + + + + E+ + ++ L A Sbjct: 293 ATPELYALLPELNISDRHPLIALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|91227537|ref|ZP_01261874.1| HemY protein [Vibrio alginolyticus 12G01] gi|91188561|gb|EAS74853.1| HemY protein [Vibrio alginolyticus 12G01] Length = 393 Score = 91.1 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 120/386 (31%), Gaps = 26/386 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RLI F V+ + S V I+ + S ++ + L LL Sbjct: 1 MFRLIFLFVVLGAGLFVGTQFSGQQGYVLISIAEKTIEMSVTTLVVFVIAALAGLFLLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + G++ + + A K + + H Sbjct: 61 LIKKLVYASSTTWNYFSVRKMRHSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L YL+ + A + + + AV L I D A Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLELASQQENAHLAVE-LTRAKQFIRDNE-----FESA 171 Query: 181 LD--ISPDAPWVTEA-VVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 D S + + + + V+ Y+ K W I L Q K A L+ Sbjct: 172 FDTLQSLKSQYASNSIVLNLLKTTYMQLKLWQPLIDLLPQLTKAKLITEEEHAELIQKAQ 231 Query: 234 LENADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + I +K N + C A+ LI++ +A +L++ Sbjct: 232 CGLLHEVAQQQGSEGLISHWNSLSRKVKQDTNLV---ACFARELITRKADAEAFTVLKEA 288 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K P PE+ + L +T + + + ++ + ++ +A Sbjct: 289 LKKQPAPELYQLLPDLNLPDTHPVVVFLEGVVKKEPDNAAAHSALAHFYFRQERWQEAQD 348 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANS 372 +A+K+ + LA + + Sbjct: 349 HFEIALKLRSDVSDYAFLADTLEKQN 374 >gi|301386720|ref|ZP_07235138.1| hemY protein, putative [Pseudomonas syringae pv. tomato Max13] Length = 414 Score = 90.4 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 142/393 (36%), Gaps = 23/393 (5%) Query: 1 MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R+ + +F I + V+ + V I + N Y +S + L++L L +L Sbjct: 1 MKRVYVLFFIAIVAAALIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + ++ + + A+ G M +A A++ ++ + Sbjct: 61 LLITLLTTSGRVVNPWSRRTRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRY 176 L Y+ + A + +Y LE L+ E AV + GD + A Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------- 228 + P P V + + Y +WS I + + +K+ + A L Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236 Query: 229 LIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285 L + + +G + S A + L + A A L + +AE +L Sbjct: 237 LTLAAYRDEQEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + + +A +Y + + + +L+ A + + L+ + +I L+ +A Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356 Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374 ++++ E+ LLAQ+ + + N Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389 >gi|213971707|ref|ZP_03399813.1| hemY protein [Pseudomonas syringae pv. tomato T1] gi|302062170|ref|ZP_07253711.1| hemY protein, putative [Pseudomonas syringae pv. tomato K40] gi|302130380|ref|ZP_07256370.1| hemY protein, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923525|gb|EEB57114.1| hemY protein [Pseudomonas syringae pv. tomato T1] Length = 414 Score = 90.4 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 142/393 (36%), Gaps = 23/393 (5%) Query: 1 MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R+ + +F I + V+ + V I + N Y +S + L++L L +L Sbjct: 1 MKRVYVLFFIAIVAAALIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + ++ + + A+ G M +A A++ ++ + Sbjct: 61 LLITLLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176 L Y+ + A + +Y LE L+ E AV + GD + A Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------- 228 + P P V + + Y +WS I + + +K+ + A L Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236 Query: 229 LIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285 L + + +G + S A + L + A A L + +AE +L Sbjct: 237 LTLAAYRDEQEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + + +A +Y + + + +L+ A + + L+ + +I L+ +A Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356 Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374 ++++ E+ LLAQ+ + + N Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389 >gi|253997744|ref|YP_003049807.1| HemY domain-containing protein [Methylovorus sp. SIP3-4] gi|313199808|ref|YP_004038466.1| hemy domain-containing protein [Methylovorus sp. MP688] gi|253984423|gb|ACT49280.1| HemY domain protein [Methylovorus sp. SIP3-4] gi|312439124|gb|ADQ83230.1| HemY domain protein [Methylovorus sp. MP688] Length = 393 Score = 90.0 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 130/385 (33%), Gaps = 23/385 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M L ++ L + ++ + V I S ++L ++ + LL Sbjct: 1 MRWLFWILLILGLAVGISLLAVNNQGYVLIVRPPYRMELSLNLLLVMILGGFISLHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + ++ PA + +R G AL GL S+A LA K + N Sbjct: 61 LIQYTRHLPASVRSYKEERRIRLGRAALSEGLQSLAEGRYLLAEKAANKALA--LEENPG 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178 L L+ + A + + + + A LY + D N A Sbjct: 119 LSTLVAARAAHKLKNKSQ-RDFYLAEAERIAPDAAVARLLYQAEFMLDDRRYNEALNVLH 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSL 234 K + P ++ V K W + + L + +K+ R Sbjct: 178 KLDKLESKYPPALRLELKAQVHLKNWEQVLVTLRRLEKHDAIESWHLRELRQQAHTHLLQ 237 Query: 235 ENADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----KIWKV 289 AD D + +Y + E +L + + AA++ I +A I+E K W Sbjct: 238 RLADDLDKLNAYWKKMPEEDRLNNR---IACIAAQTFIQAGAGDQAAEIVEMSLTKGWDS 294 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +A + LS +L++A ++ + L + + + + +A + Sbjct: 295 K----LAGMLGDCLSSQPQKQLQQAEHWLLSHENDADLLRSLGNLCVRLSLWGKAQSYFE 350 Query: 350 LAMKIAPRKEIFLLLAQI--EQANS 372 ++ + P L LA++ E+ + Sbjct: 351 ASLSVKPSAATHLALARLLDERGET 375 >gi|317494821|ref|ZP_07953232.1| hemY protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917146|gb|EFV38494.1| hemY protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 401 Score = 90.0 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 63/395 (15%), Positives = 121/395 (30%), Gaps = 29/395 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML+++ F ++ I + + + V I TS ++ +L + + Sbjct: 1 MLKVLLLFIILIAGIVLGPMFAGHQGYVLIQTDTYNIETSVTTLVIMLILLIVVLFAIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R A R + K GLM +A + K+ S + Sbjct: 61 ILRRVFRTGARTRGWFVGRKRTRARKQTREGLMKLAEGDYTQVEKLLSRNADHA--EQPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172 + YLL + A ++ LE + + TR G+ ++ Sbjct: 119 VNYLLAAEAAQQRGDELRVNQYLERASEVADSNQLPVDITRV-------RIQLARGENHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAIL 228 A+ L+++P P V Q YV + + + L N E + + Sbjct: 172 ARHGVDALLNVAPRHPEVLRLAEQAYVRTQAYQSLLEILPSLAKANVYNDDEIQQLQLKA 231 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I E G + + + + + + LI N A+ IL K Sbjct: 232 YIGLMNERMANGGSLGLKSWWNDQSRKTRHETALQVAMIEHLIECNDHDTAQQILVDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVI---VSKIALEMGSIDQA 344 + + L S N +L K+ S ++ + ++ + G QA Sbjct: 292 RKFDERLVLLMPKLKSGNPEQ----LEKLLNQQIKQHGASALLNSTLGQLLMRHGEWQQA 347 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+K P + LA + + Sbjct: 348 SEAFRAALKQRPDAYDYAWLADVLDKLHRPEEAAQ 382 >gi|296105315|ref|YP_003615461.1| putative protoheme IX biogenesis protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059774|gb|ADF64512.1| putative protoheme IX biogenesis protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 399 Score = 90.0 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 61/382 (15%), Positives = 114/382 (29%), Gaps = 26/382 (6%) Query: 11 ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70 I+ ++ + ++ + V I N TS ++ IL + + L + R A Sbjct: 12 IAGIVLGPM-LAGHQGYVLIQTDNYNIETSVTGLVIILILGVVVLLALEWILRRIFRTGA 70 Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI 129 R + K L+ +A + K M + YLL + Sbjct: 71 HTRGWFVGRKRRRARKQTEQALIKLAEGDYQQVEKLMSKNADH---AEQPVVNYLLAAEA 127 Query: 130 ALAERQYNIAHEKLEM---MLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 A A++ LE M TR + ++A+ + L Sbjct: 128 AQQRGDEARANQHLERASEMASDNQIPVEITRV-------RLQLARNENHAARHGVDRLL 180 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNR---NRAILLIARSLEN 236 +I+P P V Q Y+ W + + K + +R R + Sbjct: 181 EITPRHPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDELQRMAWIGLMDQAR 240 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD G +S K + + A+ LI + A+ IL K + Sbjct: 241 ADLGSDGLKTWWKNQSRKTRQQ-VPLQVAMAEHLIECDDHDTAQEILLDGLKRQYDDRLV 299 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + N K + + + + + ++ G +A A+K P Sbjct: 300 MVIPRLKTNNPEQIEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRP 359 Query: 357 RKEIFLLLAQIEQANSHNTDKI 378 + LA + Sbjct: 360 DAFDYAWLADTLDKQHKPEEAA 381 >gi|28867371|ref|NP_789990.1| hemY protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850605|gb|AAO53685.1| hemY protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 414 Score = 90.0 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 141/393 (35%), Gaps = 23/393 (5%) Query: 1 MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R+ + +F I + V+ + V I + N Y +S + L++L L +L Sbjct: 1 MKRVYVLFFIAIVAAALIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + ++ + + A+ G M +A A++ ++ + Sbjct: 61 LLITLLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176 L Y+ + A + +Y LE L+ E AV + GD + A Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---------- 226 + P P V + + Y +WS I + + +K+ + A Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285 + L A E+ + S A + L + A A L + +AE +L Sbjct: 237 LTLAAYRDEHEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + + +A +Y + + + +L+ A + + L+ + +I L+ +A Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356 Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374 ++++ E+ LLAQ+ + + N Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389 >gi|331018511|gb|EGH98567.1| hemY protein, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 414 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 68/393 (17%), Positives = 141/393 (35%), Gaps = 23/393 (5%) Query: 1 MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R+ + +F I + V+ + V I + N Y +S + L++L L +L Sbjct: 1 MKRVYVLFFIAIVAATLIGVAVAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + ++ + + A+ G M +A A++ ++ + Sbjct: 61 LLITLLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADA--HP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176 L Y+ + A + +Y LE L+ E AV + GD + A Sbjct: 119 LLYYIGAARAANEQGRYEDCDALLERALERQPQAELAV--ALNHAQLQQDRGDTDGALVT 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---------- 226 + P P V + + Y +WS I + + +K+ + A Sbjct: 177 LQAMNERHPHNPQVLRQLQRLYQQRGDWSDLIRLMPELRKDKVLPPKELAELERRAWGEN 236 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285 + L A E+ + S A + L + A A L + +AE +L Sbjct: 237 LTLAAYRDEHEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRA 296 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + + +A +Y + + + +L+ A + + L+ + +I L+ +A Sbjct: 297 ALKRDYNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKAR 356 Query: 346 AKAMLAMKI----APRKEIFLLLAQIEQANSHN 374 ++++ E+ LLAQ+ + + N Sbjct: 357 DYLESSLRLERNPETCAELARLLAQLGETDRSN 389 >gi|312795372|ref|YP_004028294.1| HemY protein [Burkholderia rhizoxinica HKI 454] gi|312167147|emb|CBW74150.1| HemY protein [Burkholderia rhizoxinica HKI 454] Length = 397 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 51/389 (13%), Positives = 124/389 (31%), Gaps = 10/389 (2%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 ++ + + + ++ +H V I W S + ++ L ++ R Sbjct: 6 ILWLMALFATAVLLALVGAHDAGQVLIIWAPYRIDISLNLFVAALVVSFVVLYIVVRSIR 65 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 L P + + ++AL + ++ A A S Sbjct: 66 AVLKMPERVAAYRARVRLANAHQALREAIGNLYAGRFSRAENAAREASAFDANKAPA--G 123 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L+ A R++ ++ + +E + + D + A T+ Sbjct: 124 LIGAAAAHRMREFAR-RDEWLAQVTDNDWQEARLMASAELRADARDADGALAALTEMRAQ 182 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGD 241 + ++ K W+ + + +K++ L A L + + Sbjct: 183 GGRRIHALQIALRAQQQLKNWAEVLKLVKTLEKREAIHPAVSVHLKQLAAEHLLRDRRHN 242 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A S + AA+ LI+ N+ A I+E+ + P + Y Sbjct: 243 PDALLQLWQSLSAAERQSPRIADLAAELLIALNRPADARKIVEEALAHHWDPRLLRRYAD 302 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---- 357 ++ + ++RA ++ ++ + + ++ L+ +A A A+K+A Sbjct: 303 CADDDPLPLIQRAEAWQKERQDDPDLSFTLGRLCLQQKLWGKAQAFLEQALKLAADNEPL 362 Query: 358 -KEIFLLLAQIEQANSHNTDKILYWTQSA 385 LA++ + + ++ SA Sbjct: 363 QIRAHRALARLHEQLGNAQQAAEHYRASA 391 >gi|71909283|ref|YP_286870.1| HemY, N-terminal [Dechloromonas aromatica RCB] gi|71848904|gb|AAZ48400.1| HemY, N-terminal [Dechloromonas aromatica RCB] Length = 394 Score = 89.6 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 52/394 (13%), Positives = 116/394 (29%), Gaps = 12/394 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M L + L + + V + + S +++ L A+ + Sbjct: 1 MRGLFWILALFGLAVAVALGARLNDGYVLLVFPPWRAEVSLNLLILALIGLFMAFYAVMR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V P + ++ DK + + + M Sbjct: 61 VFSATFGLPKRVREYRARQQRDKAGLVFQDAVRLLF--EGRFGQAMKKAAEAHGAGTAPG 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL---EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L L+ + A A ++ P T + + ++A Sbjct: 119 LSALIAARAAQRM--REPAKQQYWLEHAKTDDPRTEAATLMLDAEMANEERRFDAALAAL 176 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLEN 236 K ++ A +W I + Q K++A IL A Sbjct: 177 EKLQGKQGRHIAALRLELRARQGAGDWDGVIKLVRQLAKRDALPDEVVGEILTQAHLASI 236 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----H 292 A +G + +L + + AA++L + +A+ ++E Sbjct: 237 AKRGVDERRLISYLRNLPNEERGRRVVLAAARALNALGANGEAQKLIESALDAAGDDAWQ 296 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 PE+ IY L ++ +A + + L+ + ++ +A + ++ Sbjct: 297 PELLAIYGRLSDGELTARIAKAEAWLRRHPDDALLLMALGRMCQRQRLWGKAQSYLEASL 356 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + +E L LA++ + + ++ SAL Sbjct: 357 SVEVTQEAHLELARLFDQLGKSEEANKHYRASAL 390 >gi|254230104|ref|ZP_04923500.1| HemY protein [Vibrio sp. Ex25] gi|262392877|ref|YP_003284731.1| HemY-like protein [Vibrio sp. Ex25] gi|151937349|gb|EDN56211.1| HemY protein [Vibrio sp. Ex25] gi|262336471|gb|ACY50266.1| HemY-like protein [Vibrio sp. Ex25] Length = 393 Score = 89.2 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 54/380 (14%), Positives = 114/380 (30%), Gaps = 14/380 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RLI F V+ + S V I+ + S ++ + L LL Sbjct: 1 MFRLIFLFVVLGAGLFVGTQFSGQQGYVLISIAEKTIEMSVTTLVVFVIAALAGLFLLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + G++ + + A K + + H Sbjct: 61 LIKKLVYASSTTWNYFSVRKMRHSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + + AV + R + +A Sbjct: 119 LCYLVASEAAQGQGDKAK-RDHYLELASQQENAHLAVELTR--AKQFIRDNEFEAAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 V + Y+ K W I L Q K A L+ Sbjct: 176 QSLKGQYASNSIVLNLLKTTYMQLKLWQPLIDLLPQLTKAKLITEEEHAELIQKAQCGLL 235 Query: 238 DKGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + I + K+ + C A+ LI++ +A +L++ K P Sbjct: 236 HEVAQQQGSEGLISHWNGLARKVKQD-THLVACFARELIARKADAEAFTVLKEALKKQPA 294 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 PE+ + L + + + + ++ + ++ +A +A+ Sbjct: 295 PELYQLLPDLNLPDIHPVVVFLEGVVKKEPDNAAAHSALAHFYFRQEKWQEAQDHFEIAL 354 Query: 353 KIAPRKEIFLLLAQIEQANS 372 K+ + LA + + Sbjct: 355 KLRSDVSDYAFLADTLEKQN 374 >gi|213018861|ref|ZP_03334669.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995812|gb|EEB56452.1| Membrane-bound protoheme IX biogenesis protein, HemY [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 243 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 14/142 (9%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ +L ++W AI+ L + K + + A+ A + + KG + Sbjct: 104 IEHCILQEDWINAISKLKEAIKFNIFLPFDRKKMLAVFYCALAKQYESKGSFCKAIDYLA 163 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 ++ + A+ I K RKA +LE+ ++VNP P+ A +Y L + Sbjct: 164 KAQSYYATFQPINYLKAELYIKLEKIRKASTVLEEEYRVNPTPQSARMYIKLNN------ 217 Query: 311 LKRALRLEEINKESVESLVIVS 332 K A RL + + ++++ Sbjct: 218 -KGAERLYNLRPDYY---LVIA 235 >gi|258626629|ref|ZP_05721459.1| hemY protein [Vibrio mimicus VM603] gi|258581133|gb|EEW06052.1| hemY protein [Vibrio mimicus VM603] Length = 398 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 119/382 (31%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ L + + V I+ NR S ++ + L A L Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + L ++ R + + G++ + + A K + + H Sbjct: 61 VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + AV + GD +A Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALSTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ + P+ V + Q Y +W + L + K + N L + Sbjct: 176 TQLQNSHPNNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235 Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 KG H A S KL +M I LI + +A ++++ K Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P E+ + L + + + + E+ + ++ L A Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|157144430|ref|YP_001451749.1| putative protoheme IX biogenesis protein [Citrobacter koseri ATCC BAA-895] gi|157081635|gb|ABV11313.1| hypothetical protein CKO_00144 [Citrobacter koseri ATCC BAA-895] Length = 399 Score = 88.8 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 107/365 (29%), Gaps = 11/365 (3%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLVIILIVMMVILFAIEWLLRRVFRTGAHTRGWFVGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + LE + + ++A+ K L+++P P V Q Sbjct: 140 QHLERAAELAGNDTIPVEIAR--VRLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQA 197 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESL 253 Y+ WS + + K +RA+L + D+ Sbjct: 198 YIRTGAWSSLLDIIPSMAKANVGDEEHRAMLEQQAWIGLMDQARADQGSEGLREWWKNQS 257 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + + + + A+ LI + A+ I+ K + L + N K Sbjct: 258 RKTRHQVPLQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLKTNNPEQLEKV 317 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 + + + + + ++ G +A A+K P + LA Sbjct: 318 LRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATFAFRAALKQRPDAYDYAWLADALDRLHQ 377 Query: 374 NTDKI 378 + Sbjct: 378 PEEAA 382 >gi|229593298|ref|YP_002875417.1| putative HemY domain protein [Pseudomonas fluorescens SBW25] gi|229365164|emb|CAY53420.1| putative HemY domain protein [Pseudomonas fluorescens SBW25] Length = 413 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 132/375 (35%), Gaps = 27/375 (7%) Query: 21 VSHYPEDVSITWGNR-LYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 +S + V IT+ + Y +S + L ++ A L+ + + ++ + Sbjct: 22 ISKHTGYVLITYPHVLHYESSLWATLVAVFAVGLAIYLIRVLLSLITTSGGVVNPWSRRN 81 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 + A+ G M +A A + +H + L YL + A + +Y Sbjct: 82 RSRRVQVAIEQGQMDLAEGRWASAERHLHRAAEAER---QPLLYYLGAARAANEQGRYEE 138 Query: 139 AHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + LE L+ E AV + + GD + A + P V + + Sbjct: 139 SDGLLERALERQPQAELAVALSHAQLQLDRGDTDGALITLQAMHERHPHNAQVLRQLQRL 198 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILL-------IARSLENADKGDM-----IAS 245 + +WS I L + +K+ A L ++ + + ++G+ + Sbjct: 199 HQQRGDWSSVIRLLPELRKDKVLPASELAELERRAWGENLSLAAQREEQGEAGLQSLERA 258 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-ILEKIWKVNPHPEIANIYTHLLS 304 + + + ++A + L + + +A +++ + + + +Y L Sbjct: 259 WQQLTSAQRQEPQLVLAYAEQLRQLGADTQAEEALRGAIKRGYDSH----LIRLYGLLRG 314 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEI 360 + +LK A + + L+ + ++ L+ +A ++++ E+ Sbjct: 315 SDPARQLKFAEGWLKDHPSDASLLLTLGRLCLQNSLWGKARDYLESSLQVQRNPEACAEL 374 Query: 361 FLLLAQIEQANSHNT 375 LLAQ+ N Sbjct: 375 ARLLAQLGDTERSNQ 389 >gi|330965077|gb|EGH65337.1| hemY protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 415 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 65/389 (16%), Positives = 145/389 (37%), Gaps = 20/389 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 ++ + +++ + V+ + V I + N Y +S + L++L L +L + Sbjct: 6 VLLFIAIVAAALIGVA-VAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILRLLIT 64 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 + ++ + + A+ G M +A A++ ++ + L Y Sbjct: 65 LLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWASAQRHLQRAAEADA--HPLLYY 122 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALD 182 + + A + +Y LE L+ E A+ + + + GD + A + Sbjct: 123 IGAARAANEQGRYEECDALLERALERQPQAELAIALNHAQLQQDRGDTDGALGTLQAMNE 182 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---------IARS 233 P P V + + Y +WS I L + +K+ + A L +A Sbjct: 183 RHPHNPQVLRQLQRLYQQRGDWSDLIRLLPELRKDKVLPPKELAELERRAWGENLTLAAY 242 Query: 234 LENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVN 290 + +D+G + S A + L + A A L + +AE +L K + Sbjct: 243 RDESDEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRAALKRD 302 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + +A +Y + + + +L+ A + + L+ + +I L+ +A Sbjct: 303 YNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLES 362 Query: 351 AMKI----APRKEIFLLLAQIEQANSHNT 375 ++++ E+ LLAQ+ + + N Sbjct: 363 SLRLERNPETCAELARLLAQLGETDRSNA 391 >gi|262163676|ref|ZP_06031417.1| HemY-like protein [Vibrio mimicus VM223] gi|262027892|gb|EEY46556.1| HemY-like protein [Vibrio mimicus VM223] Length = 398 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 119/382 (31%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ L + + V I+ NR S ++ + L A L Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + L ++ R + + G++ + + A K + + H Sbjct: 61 VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + AV + GD +A Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALNTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ + P+ V + Q Y +W + L + K + N L + Sbjct: 176 TQLQNSHPNNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235 Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 KG H A S KL +M I LI + +A ++++ K Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P E+ + L + + + + E+ + ++ L A Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|260774860|ref|ZP_05883762.1| HemY-like protein [Vibrio coralliilyticus ATCC BAA-450] gi|260609285|gb|EEX35440.1| HemY-like protein [Vibrio coralliilyticus ATCC BAA-450] Length = 392 Score = 88.5 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 124/382 (32%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R+I F V+ + + + V I+ ++ S ++ + L A L Sbjct: 1 MFRIIFLFVVLGAGLFAGTQYAGQQGYVLISVADKTIEMSVTTLVIFVIATLAALFGLEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L + ++ R + + G++ + + LA K + + H Sbjct: 61 LIKKTLYASSATWNYFSVRKMRRSRRYTNEGIIKLLEGDFKLAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + AV + R + +A Sbjct: 119 LCYLVASEAAQGLGDNEK-RDHYLKLASEQENALLAVELTR--AKQQVREANYTAAFETL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 ++ P+ V + Y+ K W + L+ K+ +A L Sbjct: 176 SQLKSSYPNNRIVLNLLKNVYIELKMWQPLLNTLSTLVKSKIITKDEQAQLTQRAQCGLL 235 Query: 238 DKGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ I LK + + C AK L+++ +A ++++ K + Sbjct: 236 EEVAEQKGSEGLIAHWNSLTRKLKSDTHLVE---CFAKQLMARKADSEAFTLVKENLKKH 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P E+ + + + + + + + + + +++ L + +A Sbjct: 293 PDSELYALLPDMNLADDHPVVVFLEDVLKKDGNNASAHSALAQFHLRNENWSEAQQHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSVRSSVSDYSYLADALEKQN 374 >gi|258623139|ref|ZP_05718151.1| hemY protein [Vibrio mimicus VM573] gi|258584622|gb|EEW09359.1| hemY protein [Vibrio mimicus VM573] Length = 398 Score = 88.5 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 118/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ L + + V I+ NR S ++ + L A L Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + L ++ R + + G++ + + A K + + H Sbjct: 61 VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + AV + GD +A Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALNTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ + P V + Q Y +W + L + K + N L + Sbjct: 176 TQLQNSHPHNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235 Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 KG H A S KL +M I LI + +A ++++ K Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P E+ + L + + + + E+ + ++ L A Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|238798582|ref|ZP_04642058.1| hypothetical protein ymoll0001_37320 [Yersinia mollaretii ATCC 43969] gi|238717538|gb|EEQ09378.1| hypothetical protein ymoll0001_37320 [Yersinia mollaretii ATCC 43969] Length = 399 Score = 88.5 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 119/365 (32%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L L A++++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMLILVLVAFLIVEWILRRIFRTGARTRGWFMGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + +S + L + ++E + I + + + + Sbjct: 199 RSGAYSSLLEILPAIGKVQLHTSEEISALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L S N K Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKAREAFTAALVQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|146313622|ref|YP_001178696.1| putative protoheme IX biogenesis protein [Enterobacter sp. 638] gi|145320498|gb|ABP62645.1| HemY protein [Enterobacter sp. 638] Length = 399 Score = 88.5 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 110/376 (29%), Gaps = 14/376 (3%) Query: 11 ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70 I+ ++ + ++ + V I N TS ++ IL + A + + R A Sbjct: 12 IAGIVLGPM-LAGHQGYVLIQTDNYNIETSVTGLVIILILTMVALFAIEWILRRIFRTGA 70 Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI 129 R + K L+ +A + K M + YLL + Sbjct: 71 HTRSWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMTKNADH---AEQPVVNYLLAAEA 127 Query: 130 ALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A A++ LE + G+ ++A+ + L+I+P Sbjct: 128 AQQRGDEMRANQHLERASELASNDQIPVEITR--VRLQLARGENHAARHGVDRLLEITPH 185 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P V Q Y+ W + + K + +R L + D+ Sbjct: 186 HPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDALQRQAWIGLMDQARADLGS 245 Query: 247 H----DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + + A+ LI + A+ I+ K + + L Sbjct: 246 DGLKTWWKNQSRKTRQQVPLQVAMAEHLIECDDHDTAQAIILDGLKRQYDDRLVMVIPRL 305 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + N K + + + + + ++ G +A A+K P + Sbjct: 306 KTNNPEQMEKMLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAFDYA 365 Query: 363 LLAQIEQANSHNTDKI 378 LA + Sbjct: 366 WLADSLDKQHKPEEAA 381 >gi|117621176|ref|YP_854999.1| HemY protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562583|gb|ABK39531.1| HemY protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 387 Score = 88.1 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 118/370 (31%), Gaps = 21/370 (5%) Query: 1 MLRLIRYFFVISLVICSFII---VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL 57 M+RLI +++ ++ I S V I+ GN +S + + F A ++ Sbjct: 1 MIRLIV---LVAAMVAGLIFGPQASGNKGYVLISLGNYTVESSVTSAVILAVLFYGALLI 57 Query: 58 LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 + + R K + +++A + A K+ + Sbjct: 58 VEWLLGRVFGLRRKTLGWYGSRRRRKANQQTVAATLAMAEGHYSQAEKLM--LKGASNSD 115 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L YL + A A + L + + P + G ++A Sbjct: 116 TPLLNYLSAAKAAQARGDDVRRDQYLQKAQEENPKAELALTLTQTQLQIEQGQYDTALAM 175 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 ++P P V + + Q ++ ++W+ I + K K + LL Sbjct: 176 LESVYALNPRHPMVLDQLRQVHLAREDWAALIDLIPVLHKVGKLTPKQEEDLLQQAWRGR 235 Query: 237 ADK--GDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D G + E L+ + + A + L + N+ A + + Sbjct: 236 LDAASGALETLRPIWQELPRKLRQDPDLLAAYGDRLRQLGADNE---AAELWLDALRKQV 292 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P++ L ++ L +++ + ++++ L G +D A Sbjct: 293 SPQLLARLPKLKLDSYQPMLTLLQKIQ----DQPGVDAALAQVYLLAGQLDDAQRLLEQE 348 Query: 352 MKIAPRKEIF 361 + AP ++ Sbjct: 349 VAKAPNAAVY 358 >gi|219871195|ref|YP_002475570.1| porphoryin biosynthesis protein HemY [Haemophilus parasuis SH0165] gi|219691399|gb|ACL32622.1| porphoryin biosynthesis protein HemY [Haemophilus parasuis SH0165] Length = 416 Score = 88.1 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 52/397 (13%), Positives = 125/397 (31%), Gaps = 30/397 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + +S + V I ++ S +++ + + Sbjct: 1 MFRVLFLMLIVLAGLILGPYISGHQGYVRIETAGKVIEMSLVMLVVFFAVAMAVVYAIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R F + R K + GLM + + A ++ + ++ Sbjct: 61 IFRRFFGLSRGAYQWFGDRKRKKAQQQTLEGLMKMTEGDYSKAERLIAKNAKHAA--EPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGDL 170 L ++ + A A++ L + ++I TR + + D Sbjct: 119 LNFIKAAEAAQQRGDELNANKYLIEAAKIAGPNNVAVEIARTRILLLQGKLPAARSAVDS 178 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRA 226 L+++P+ ++ Y +K + L + +A+E+ R Sbjct: 179 L---------LELAPNNVEALRLAIEIYQKSKAYKALDDVLEQIGQRSFLSAEEYERLEQ 229 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + E ++ SI + K LI + + A+ I + Sbjct: 230 QVNDGLLDEIMNEEGQEGLLKWWDNQPSRRRRSIYVRVGLIKRLIDTDDHQSAQEIALET 289 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-----VIVSKIALEMGSI 341 K ++A +Y L + K L + N ++ E ++ I G+ Sbjct: 290 VKKYQDEQLALLYPELTRLQVDEEHKLFKVLLKRNSKAEERYSDDYARVLGYIHTRAGNF 349 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 D+A + ++ ++A +H+ + Sbjct: 350 DKAKPYFVQLLEHKECVAKDRIMALYVAEQTHDVELA 386 >gi|330876443|gb|EGH10592.1| hemY protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 415 Score = 88.1 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 64/389 (16%), Positives = 144/389 (37%), Gaps = 20/389 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 ++ + +++ + V+ + V I + N Y +S + L++L L +L + Sbjct: 6 VLLFIAIVAAALIGVA-VAEHSGYVLIAYQNFRYESSLWATLALLVAVLLVIAILRLLIT 64 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 + ++ + + A+ G M +A A++ ++ + L Y Sbjct: 65 LLTTSGRVVNPWSRRNRRRRVQIAIEQGQMDLAEGRWASAQRHLQGAAEADA--HPLLYY 122 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALD 182 + + A + +Y LE L+ E A+ + + + GD + A + Sbjct: 123 IGAARAANEQGRYEECDALLERALERQPQAELAIALNHAQLQQDRGDTDGALGTLQAMNE 182 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---------IARS 233 P P V + + Y +WS I L + +K+ + A L +A Sbjct: 183 RHPHNPQVLRQLQRLYQQRGDWSDLIRLLPELRKDKVLPPKELAELERRAWGENLTLAAY 242 Query: 234 LENADKGDM--IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVN 290 + +D+G + S A + L + A A L + +AE +L K + Sbjct: 243 RDESDEGAPTGLPSLEAAWQGLSSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRAALKRD 302 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + +A +Y + + + +L+ A + + + + +I L+ +A Sbjct: 303 YNSHLARLYGLVRGSDPLKQLQTAEGWLKHHPADPSLSLSLGRICLQGRLWGKARDYLES 362 Query: 351 AMKI----APRKEIFLLLAQIEQANSHNT 375 ++++ E+ LLAQ+ + + N Sbjct: 363 SLRLERNPETCAELARLLAQLGETDRSNA 391 >gi|52842942|ref|YP_096741.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630053|gb|AAU28794.1| protoheme IX synthesis HemY [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 395 Score = 88.1 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 126/383 (32%), Gaps = 51/383 (13%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F ++ L + I ++ P V I N T+ +V + L+F F L Sbjct: 1 MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 P M+ +R K GL+ + A+ + + Sbjct: 61 FCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177 L YL + A + + E +P + + + + A Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166 Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 +AL ++P P+V + ++ Y K+W + I L KKN Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKN---------H 217 Query: 228 LLIARSLENADKGDMIASYHDAIESL------KLCDNS-------IMASICAAKSLISQN 274 ++ ++ E K + + D + KL + A+ LI Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYARFLIRNQ 277 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +AE L++ + + +Y+ L E L A L + N S + + ++ Sbjct: 278 DYDQAEYHLKRCLRKELDNRLIELYSLLPCEENQ--LLFAESLLKKNPHSAALYLCLGRM 335 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 L +A ++++ P Sbjct: 336 CLSRHLWGKAKHYLEQSIELNPT 358 >gi|323495301|ref|ZP_08100382.1| heme biosynthesis protein [Vibrio brasiliensis LMG 20546] gi|323310478|gb|EGA63661.1| heme biosynthesis protein [Vibrio brasiliensis LMG 20546] Length = 395 Score = 88.1 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 133/399 (33%), Gaps = 11/399 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RLI F V+ L + + V I+ ++ S ++ + L A L Sbjct: 1 MFRLIFLFVVLGLGLFVGTQYAGQQGYVLISIASKTIEMSVTTLVIFVIAALAALFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + ++ R + + G++ + + A K + + H Sbjct: 61 LVKKVFYASSATWNYFSVRKMRRSRRYTNEGIIKLLEGDFKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178 L YL+ + A + ++ + + AV L +I D N A T Sbjct: 119 LCYLVASEAAQGMGD-DAQRDRYLELAAQQDNSQLAVE-LTRAKQQIRDAKYNEALETLT 176 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + V + Q Y+ K W + L + K+ + L Sbjct: 177 SLKANYANNMIVLNLLKQVYIELKLWQPLLDLLPKLVKSNIVTKEEQEPLAQRAQCGLLA 236 Query: 239 KGDMIASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + I + A C AK LI++ +A ++++ K +P+ + Sbjct: 237 EVAEQKGSEGLIAHWNALPRKVKADSHLVECFAKQLINRQADSEAFTLIKETLKKHPNSD 296 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + L ++ + + + + + ++ +++ L + +A A+ + Sbjct: 297 LYRLLPELKLSDSHPVVTFLEGVLKKDANNAQANSALAQFHLRNENWSRAQQHLEKALSV 356 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 + LLA + + T ++ AL + +P Sbjct: 357 RSNVSDYGLLADALEKQNL-TKAAHEVSKKALTLVSEPA 394 >gi|261365623|ref|ZP_05978506.1| HemY family protein [Neisseria mucosa ATCC 25996] gi|288565859|gb|EFC87419.1| HemY family protein [Neisseria mucosa ATCC 25996] Length = 407 Score = 87.7 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 130/390 (33%), Gaps = 21/390 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++ + + V+ ++ S Y +V I G + R + + L F+ A L Sbjct: 1 MKAVVWIVVLFAAAVGIVLTSGVYTGNVYIVVGQVMMRVNLHAFILGLVLFVVALYFLIK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 ++ PA + R + AL + ++ A + + V + N Sbjct: 61 FIVGLMNIPARMQRFGTARKGRQAAVALNSAGLAFFEGRFEKAEQEAAKVLENKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + + L+ + ++P ++ + Y L E + D +A Sbjct: 121 NLALMLGAHAADQMENFELRDHYLKDIEKLPNKQQLSRYLLLAESALGRRDYPTALENLN 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-------EWNRNRAILLIA 231 A I P+ + ++ + + + K ++ L+A Sbjct: 181 AAARIHPNLSRLARLQLRYAFDHGDAEDVLAKSEKLMKAGAINDFEAEQYQSWAYRRLLA 240 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A + +A+++ +LC + A+ +A + + N Sbjct: 241 EASDAARLKACLKRIPEALKADELC-------VAIAEKYERLGLYTEAVKWVRHYYPQNR 293 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSIDQAHAK 347 PE+ + + ++A+ L + + L+ + ++A +A + Sbjct: 294 RPELLEAFVESVRFFNERGQQKAIDLADSWLKDKPDDAPLLMYLGQLAYGRSLWGKAQSY 353 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 ++ + P L+LA++ Sbjct: 354 LEASIALQPSIAARLMLARVLDETGQPQKA 383 >gi|145300739|ref|YP_001143580.1| HemY protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142853511|gb|ABO91832.1| HemY protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 387 Score = 87.3 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 113/367 (30%), Gaps = 15/367 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI V+ + S V I GN +S + + F A +++ Sbjct: 1 MIRLIVLVAVMIAGLMFGPEASGNKGYVLIALGNYTVESSVTSAVILAVLFYGALLVIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R K + +++A + A K+ + Sbjct: 61 LLGRVFGLRRKTLGWYGSRRRRKANQQTVAATLAMAEGHYSQAEKLM--LKGASNSDTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L YL + A A + L + + P + G ++A Sbjct: 119 LNYLSAAKAAQARGDDVRRDQYLQKAQEENPKAELALTLTQTQLQIEQGQYDTALAMLES 178 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENAD 238 ++P P V + + Q ++ ++W+ I + K K + +L A + Sbjct: 179 VYALNPRHPMVLDQLRQVHLAREDWAAIIDLIPVLHKVGKLTPKQEEDLLHRAWTGRLKA 238 Query: 239 KGDMIASYHDAIES----LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 D + + + L+ + + A L +A + + P+ Sbjct: 239 ASDALETLRPVWQGLPRKLRQDPDLLAA---YGDRLRELGADSEAAELWLDALRKQVSPQ 295 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + L E+ L +++ + ++++ L G +DQA + Sbjct: 296 LLARLPKLKLESYQPVLTLLQKIQ----DQPGVEAALAQVYLLAGQLDQAQRLLEQEVAK 351 Query: 355 APRKEIF 361 P ++ Sbjct: 352 TPSAAMY 358 >gi|54295576|ref|YP_127991.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila str. Lens] gi|53755408|emb|CAH16904.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila str. Lens] Length = 395 Score = 87.3 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 59/387 (15%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F ++ L + I ++ P V I N T+ +V + L+F F L Sbjct: 1 MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P M+ +R K GL+ + A+ + + Sbjct: 61 LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177 L YL + A + + E +P + + + + A Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166 Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 +AL ++P P+V + ++ Y K+W + I L KKN Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKN---------H 217 Query: 228 LLIARSLENADKGDMIASYHDAIESL------KLCDNS-------IMASICAAKSLISQN 274 ++ ++ E K + + D + KL + A+ LI Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYARFLIRNR 277 Query: 275 KKRKAE----VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +AE L K + +Y+ L E L A L + N S + Sbjct: 278 DYDQAEYHLRRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAGLHLC 331 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ L +A ++++ P Sbjct: 332 LGRMCLSRHLWGKAKHYLEQSIELNPT 358 >gi|148358522|ref|YP_001249729.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila str. Corby] gi|296108390|ref|YP_003620091.1| HemY protein [Legionella pneumophila 2300/99 Alcoy] gi|148280295|gb|ABQ54383.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila str. Corby] gi|295650292|gb|ADG26139.1| HemY protein [Legionella pneumophila 2300/99 Alcoy] Length = 395 Score = 86.9 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 59/387 (15%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F ++ L + I ++ P V I N T+ +V + L+F F L Sbjct: 1 MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P M+ +R K GL+ + A+ + + Sbjct: 61 LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177 L YL + A + + E +P + + + + A Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166 Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 +AL ++P P+V + ++ Y K+W + I L KKN Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKN---------H 217 Query: 228 LLIARSLENADKGDMIASYHDAIESL------KLCDNS-------IMASICAAKSLISQN 274 ++ ++ E K + + D + KL + A+ LI Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYARFLIRNR 277 Query: 275 KKRKAE----VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +AE L K + +Y+ L E L A L + N S + Sbjct: 278 DYDQAEYHLRRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAALYLC 331 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ L +A ++++ P Sbjct: 332 LGRMCLSRHLWGKAKHYLEQSIELNPT 358 >gi|167855155|ref|ZP_02477926.1| HemY-like protein [Haemophilus parasuis 29755] gi|167853700|gb|EDS24943.1| HemY-like protein [Haemophilus parasuis 29755] Length = 416 Score = 86.9 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 52/397 (13%), Positives = 124/397 (31%), Gaps = 30/397 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + +S + V I ++ S +++ + + Sbjct: 1 MFRVLFLMLIVLAGLILGPYISGHQGYVRIETAGKVIEMSLVMLVVFFAVAMAVVYAIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R F + R K + GLM + + A ++ + ++ Sbjct: 61 IVRRFFGLSRGAYQWFGDRKRKKAQQQTLEGLMKMTEGDYSKAERLIAKNAKHAA--EPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGDL 170 L ++ + A A++ L + ++I TR + + D Sbjct: 119 LNFIKAAEAAQQRGDELNANKYLIEAAKIAGPNNVAVEIARTRILLLQGKLPAARSAVDS 178 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRA 226 L+++P+ ++ Y +K + L + +A+E+ R Sbjct: 179 L---------LELAPNNVEALRLAIEIYQKSKAYKALDDVLEQIGQRSFLSAEEYERLEQ 229 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + E ++ SI + K LI + + A+ I + Sbjct: 230 QVNDGLLDEIMNEEGQEGLLKWWDNQPSRRRRSIYVRVGLIKRLIDTDDHQSAQEIALET 289 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-----VIVSKIALEMGSI 341 K ++A +Y L + K L + N ++ E ++ I G Sbjct: 290 VKKYQDEQLALLYPELTRLQVDEEHKLFKVLLKRNSKAEERYSDDYARVLGYIHTRAGHF 349 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 D+A + ++ ++A +H+ + Sbjct: 350 DKAKPYFVQLLEHKECVAKDRIMALYVAEQTHDVELA 386 >gi|307611616|emb|CBX01300.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila 130b] Length = 395 Score = 86.9 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 59/387 (15%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F ++ L + I ++ P V I N T+ +V + L+F F L Sbjct: 1 MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSVFGLFFLFFLIYGLVQ 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P M+ +R K GL+ + A+ + + Sbjct: 61 LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177 L YL + A + + E +P + + + + A Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166 Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 +AL ++P P+V + ++ Y K+W + IT L KKN Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLITLLPDLKKN---------H 217 Query: 228 LLIARSLENADKGDMIASYHDAIESLK----------LCDNSIMASICAA---KSLISQN 274 ++ ++ E K + + D + + L + + A + LI Sbjct: 218 IISDQAFEQLQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTLVNDTAITAEYTRFLIRNR 277 Query: 275 KKRKAE----VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +AE L K + +Y+ L E L A L + N S + Sbjct: 278 DYDQAEYHLRRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAALHLC 331 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ L +A ++++ P Sbjct: 332 LGRMCLSRHLWGKAKHYLEQSIELNPT 358 >gi|332995108|gb|AEF05163.1| heme biosynthesis protein [Alteromonas sp. SN2] Length = 390 Score = 86.5 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 73/383 (19%), Positives = 136/383 (35%), Gaps = 10/383 (2%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61 + L I +I +I+ V I+ GN TS I+ + +W ++ + Sbjct: 6 IALAVLAAFIVALIVGPMILGDK-GYVLISLGNTAIETSLIGFCIIIICAIISWYIISKL 64 Query: 62 SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121 + LS K +A Y GL S+AA ++ A H +SQ E + Sbjct: 65 VLWTLSLVTGSHRWFGALGERKRKRAFYHGLQSLAAGDLKSA---HKALSQTTNGDFEGV 121 Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YL Q+A ++ A L + + + A + G A Sbjct: 122 NYLAAAQVAQSQNDPQKARYFLLQAAEYDSAKVAATIVMARIDVSEGKYTDALEKLDSLD 181 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADK 239 + + P V + +W L+ +K +++ + + E A K Sbjct: 182 EEEANNPQVIQLKASIMAEQGQWQTLQEKLSGWRKALPKEDYTAWSQRIAKGKLAEIASK 241 Query: 240 GDMIASYHDAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + D++ A+ + L+ Q +A+ +L + K PHP + Sbjct: 242 NGAAELKTHWEGLPRKIKQDDAYRAAYI--QQLLEQGMHAEAQTLLVEWQKRGPHPALFP 299 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +T L N L+ + + E+VE + ++A G A + A+K+ Sbjct: 300 YFTQLNIPNAAPSLRLLESWIKQDSENVELYSTLGRVAFNAGDDILAEKVLLKAVKMESN 359 Query: 358 KEIFLLLAQIEQANSHNTDKILY 380 K+ LLL+ I + +T + Y Sbjct: 360 KDDLLLLSAISERRHDSTTALQY 382 >gi|156935873|ref|YP_001439789.1| putative protoheme IX biogenesis protein [Cronobacter sakazakii ATCC BAA-894] gi|156534127|gb|ABU78953.1| hypothetical protein ESA_03756 [Cronobacter sakazakii ATCC BAA-894] Length = 398 Score = 86.5 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 107/365 (29%), Gaps = 11/365 (3%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I TS + IL L + + R A R Sbjct: 21 VAGHQGYVLIQTDTWNIETSVTGLAIILILSLVVLFAIEWLLRRLFRTGARTRGWFAGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 81 RSRARKQTKLALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + LE + + ++A+ + L+I+P P V Q Sbjct: 139 QHLERAAELADNDQIPVEITR--VRLQLARNENHAARHGVDRLLEITPRHPEVLRLAEQA 196 Query: 198 YVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIA--RSLENADKGDMIASYHDAIESLK 254 Y+ WS + + +K + A+ A ++ A + Sbjct: 197 YIRTGAWSSLLDIIPSMQKAGVGDDEHRDALTRQAWIGLMDQARADQGSDGLKAWWRNQS 256 Query: 255 LCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 A A A+ LI + + A+ I+ K + + L + N K Sbjct: 257 RKTRHQPALQVAMAEHLIECDDHQTAQEIILDGLKRQYDDRLVLLMPRLKAGNPEQLEKA 316 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 + + + + ++ + G +A A+K P + LA + Sbjct: 317 LRQQIKTYGDRPLLWSTLGQLLMSHGEWKEASLAFRAALKQRPDAFDYAWLADVLDRLHQ 376 Query: 374 NTDKI 378 + Sbjct: 377 PEEAA 381 >gi|217975051|ref|YP_002359802.1| HemY domain-containing protein [Shewanella baltica OS223] gi|217500186|gb|ACK48379.1| HemY domain protein [Shewanella baltica OS223] Length = 388 Score = 86.5 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 57/403 (14%), Positives = 135/403 (33%), Gaps = 32/403 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59 M++++ + ++ + +C + V I G+ TS + L F + +L + Sbjct: 1 MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60 Query: 60 AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117 V + +R K + + G +++A + P A R M Sbjct: 61 LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPA 118 Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 L Q IA ++ A + TR + D Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGELTLARAELD-- 176 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228 + A + +P ++ Y ++W A+ L +K++ + N + Sbjct: 177 ---KLAPTSKSKAPVLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228 Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L A + + S + + A L N+K +A ++ Sbjct: 229 ATNCALLKAAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 K + +P + + + + K+ L+ E ++ + + + ++K+ + + +A Sbjct: 286 KKLRTSPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + ++ P K +L LA+I++ + A++ Sbjct: 346 RSCLQNVCRLEPTKASWLALARIQE-QLGEQGNANQSYRQAVN 387 >gi|54298730|ref|YP_125099.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila str. Paris] gi|53752515|emb|CAH13947.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella pneumophila str. Paris] Length = 395 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 63/378 (16%), Positives = 122/378 (32%), Gaps = 41/378 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F ++ L + I ++ P V I N T+ +V L+F F L Sbjct: 1 MIRVLFAFIILLLSVFLGIQLNKDPGYVLIAINNWTIETTLWVSAFGLFFLFFLIYGLVQ 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P M+ +R K GL+ + A+ + + Sbjct: 61 LCNKITRMPGMVNKWHSRRLAQKAQATTRKGLIEYSEGYWQKAK--NHLIQALPNTDTPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA- 177 L YL + A + + E +P + + + + A Sbjct: 119 LNYLTAARAAQKMGDSKL-RDHYLREAQQSMPEAK-----------IAVELTQAQLQLAN 166 Query: 178 ---TKALD-------ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNR 223 +AL ++P P+V + ++ Y K+W + I L KKN + + + Sbjct: 167 HQWEQALATLKHLQDLAPRHPYVLKLLMNLYEEIKDWQQLIALLPDLKKNHIISDQAFEQ 226 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE--- 280 + + ++ A K N + A+ LI +AE Sbjct: 227 LQKNTYLQAMIDLAKHNQSDGITKLYQTLPKTMVNDTAITAEYARFLIRNQDYDQAEYHL 286 Query: 281 -VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 L K + +Y+ L E L A L + N S + + ++ L Sbjct: 287 RRCLRKELDNR----LIELYSLLPCEENQ--LLFAESLLKKNPHSAALYLCLGRMCLSRH 340 Query: 340 SIDQAHAKAMLAMKIAPR 357 +A ++++ P Sbjct: 341 LWGKAKHYLEQSIELNPT 358 >gi|325266581|ref|ZP_08133258.1| HemY family protein [Kingella denitrificans ATCC 33394] gi|324982024|gb|EGC17659.1| HemY family protein [Kingella denitrificans ATCC 33394] Length = 400 Score = 86.5 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 140/400 (35%), Gaps = 19/400 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M +L+ + +L I I Y +V + + + R + + + L + A +L Sbjct: 1 MKQLLWIIILFALAIGVAIATRTYTGNVYLVIEHTMIRVNLHLFVLGLVASVVALYILVR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + LS P L R K ++L ++ A+ V ++ Sbjct: 61 LIAGILSTPDKLSRFGVGRRNRKATQSLNAAGLAYFEGKFQEAQAQADKVLANKEAGDKR 120 Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 ++ L+ A + A ++ + ++P + + + L E + + A+ + Sbjct: 121 ILALMLAAHAADQSGNAEARDQYLHDIEKLPEKTQLSRHLLLAESAINQQNDEEAENHLK 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLEN 236 A I+P + ++ + A+ L++ K + A N N A L R+ Sbjct: 181 AAAQINPRLTRLVRLQLRHALDKG---NALEILDKVDKLRRAGAMNDNEAEQLSERAYAQ 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKVNPHP 293 A+ A LK +S+ A +A KA + + + N Sbjct: 238 LLSLAQDAAGLKAC--LKRIPDSLKAGALSAAIAQKYAELGLYDKAVAWVNQYYPQNHRA 295 Query: 294 EIANIYT----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ +++ +L + A N + L + +A +A Sbjct: 296 DLLSVFVQSAQYLDEYGQQKAIDTADAWLRQNPNDPKLLAALGDLAYHRQLWGKAQGYLE 355 Query: 350 LAMKIAPRKEIFLLLAQI-EQANSHNTDKILYWTQSALHA 388 ++++ P L LA++ EQ+ HN + + AL A Sbjct: 356 ASLRLEPTVHARLTLAKVFEQSQRHNDAQEQR--RLALSA 393 >gi|288550561|ref|ZP_05970917.2| HemY protein [Enterobacter cancerogenus ATCC 35316] gi|288314624|gb|EFC53562.1| HemY protein [Enterobacter cancerogenus ATCC 35316] Length = 401 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 57/381 (14%), Positives = 113/381 (29%), Gaps = 24/381 (6%) Query: 11 ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70 I+ ++ + ++ + V I N TS ++ IL + + + R A Sbjct: 14 IAGIVLGPM-LAGHQGYVLIQTDNYNVETSVTGLVIILILGVVVLFAVEWILRRIFRTGA 72 Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI 129 R + K L+ +A + K M + YLL + Sbjct: 73 HTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMSKNADH---AEQPVVNYLLAAEA 129 Query: 130 ALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 A A++ LE + + TR + ++A+ + L Sbjct: 130 AQQRGDEARANQHLERASELSPKDPIPVEITRV-------RLQLARNENHAARHGVDRLL 182 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNRNRAILLIARSLENADK 239 +I+P P V Q Y+ W + + K + +R+ L L + + Sbjct: 183 EITPRHPEVLRLAEQAYIRTGAWGSLLDIIPSMAKADVGDDEHRDELQRLAWIGLMDQAR 242 Query: 240 GD--MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D + I + A+ LI + A+ IL K + Sbjct: 243 ADLGSDGLKTWWKNQSRKTRQQIPLQVAMAEHLIECDDHDTAQEILLDGLKRQYDDRLVM 302 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L + N K + + + + + ++ G +A A+K P Sbjct: 303 VIPRLRTNNPEQIEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD 362 Query: 358 KEIFLLLAQIEQANSHNTDKI 378 + LA + Sbjct: 363 AFDYAWLADSLDKQHKPEEAA 383 >gi|254515496|ref|ZP_05127556.1| HemY domain protein [gamma proteobacterium NOR5-3] gi|219675218|gb|EED31584.1| HemY domain protein [gamma proteobacterium NOR5-3] Length = 414 Score = 86.1 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 131/390 (33%), Gaps = 26/390 (6%) Query: 6 RYFFVISLVICSFIIVS---HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVS 62 + + ++ IV+ P + I +G TS +V + ++ + Sbjct: 4 LFVIALLALVAGVGIVALIETEPGYLLIAYGGYTVETSFWVGILLIATVVLLLYASLRFL 63 Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 ++ PA + + +R + + GL++ N +RK + + L Sbjct: 64 HRLITSPANVLNWAGERRLRQSARLTSRGLINFVEGNWAQSRK--QLLRGARYSESPLLN 121 Query: 123 YLLEVQIA------LAERQY--NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 YL+ + + A R++ A +E ++ + T+ A Sbjct: 122 YLMSARASYRLQEPEAMRRHLVQAAESDIEAIIAVDLTQA-------ELQLNDRQYEKAL 174 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLI 230 + A P V + + Y + + L +K+ A E ++ A + Sbjct: 175 KTLEGAKKTPGKHPQVLHLLCKAYDGLGDIEAMLALLPALRKHRVGGALELDKLEARIHH 234 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + A GD + K + + SL+ ++ E +E+ K + Sbjct: 235 DLLEQAAVTGDAALLMARWKKYPKRLVDDEAVQLHYLSSLLQCDETSTVEREIERRLKKH 294 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P + ++Y + ++ +L A + + E L+ + ++A+ +A Sbjct: 295 WQPALVSLYGRIPRQSAQKQLATAEVWLRQHSDDPELLLCLGRLAMVERQWAKARDFLER 354 Query: 351 AMKIAPRKEIFLLLAQI--EQANSHNTDKI 378 + P +E L L ++ + ++ Sbjct: 355 SHAARPSEEACLELGRLLTAVGDHATAAEV 384 >gi|304412543|ref|ZP_07394149.1| HemY domain protein [Shewanella baltica OS183] gi|307307202|ref|ZP_07586940.1| HemY domain protein [Shewanella baltica BA175] gi|304349185|gb|EFM13597.1| HemY domain protein [Shewanella baltica OS183] gi|306910441|gb|EFN40872.1| HemY domain protein [Shewanella baltica BA175] Length = 388 Score = 85.8 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 57/403 (14%), Positives = 135/403 (33%), Gaps = 32/403 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59 M++++ + ++ + +C + V I G+ TS + L F + +L + Sbjct: 1 MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60 Query: 60 AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117 V + +R K + + G +++A + P A R M Sbjct: 61 LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMVKGADNGELPA 118 Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 L Q IA ++ A + TR + D Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGELALARTELD-- 176 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228 + A + +P ++ Y ++W A+ L +K++ + N + Sbjct: 177 ---KLAPTSKSKAPVLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228 Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L A + + S + + A L N+K +A ++ Sbjct: 229 ATNCALLKAAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 K + +P + + + + K+ L+ E ++ + + + ++K+ + + +A Sbjct: 286 KKLRTSPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + ++ P K +L LA+I++ + A++ Sbjct: 346 RSCLQNVCRLEPTKNSWLALARIQE-QLGEQGHANQSYRQAVN 387 >gi|114321814|ref|YP_743497.1| HemY domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114228208|gb|ABI58007.1| HemY domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 435 Score = 85.8 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 52/380 (13%), Positives = 129/380 (33%), Gaps = 25/380 (6%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 + + + ++ TS + + L +L+ + + P +L H +R Sbjct: 20 WLQPHTGYLVLSVAGWRIETSLIFAVLAVAVVLVVLQVLWVLLDRTVGLPKVLSHWSTRR 79 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 +K + GL+++A R+ + + + L+ L + R Sbjct: 80 RKEKARGEMAKGLLALAEGRY---RRGEDLLLKHVERSDYPLINYLGAALCAQRRHATET 136 Query: 140 HEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + + + R ++ G A T A + +P+ E + Sbjct: 137 RDSYLALAE-QTARGSGSAVNLLQAQLYMESGQWEQALASLTSAYERNPNHHRTLEMMRD 195 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK------GDMIASYHDAI 250 V ++W R L +K + + + + GD+ +++ Sbjct: 196 CCVALEDWERLGRLLKPLRKQGIIGSEEAEEYARYVARDKIRRAARIGLGDLESAWSRLP 255 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----KIWKVNPHPEIANIYTHLLSEN 306 + + D+ + + A++L+ ++ +A V+L+ + W + + L + Sbjct: 256 RAQRNDDDLV---LTHAEALLELDEIDRAAVVLKGRIDETWDER----LIMRFGALEQID 308 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +L++ R ++ L + ++AL + D A A+ R E+++ L Sbjct: 309 PEWQLQQLKRWLRQQPDNAALLYVAGRVALRLHDWDLAREYLEQALARRARPEVYMALGA 368 Query: 367 IEQANSHNTDKILYWTQSAL 386 + + D + AL Sbjct: 369 LLEFQERPDD-ARELYRKAL 387 >gi|56476044|ref|YP_157633.1| putative protein porphyrin biosynthesis [Aromatoleum aromaticum EbN1] gi|56312087|emb|CAI06732.1| putative protein porphyrin biosynthesis [Aromatoleum aromaticum EbN1] Length = 392 Score = 85.8 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 57/410 (13%), Positives = 126/410 (30%), Gaps = 59/410 (14%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + + + +++ V + + S +++ L F ++ Sbjct: 1 MRTLLWLIALFALAAGVAMLASVNTGYVLVVLPPWRAQLSLNLLIVALLATFFIGYVVLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV---------- 110 + ++ P + +R DK +AL GL ++ A K+ Sbjct: 61 LVGKTIALPGRVGVFRERRRKDKAGRALREGLRALFEGRFAQALKLSGKAFDAGESRSMA 120 Query: 111 -----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 H H++ + + A E + +A E L I R + Sbjct: 121 ALVAARAAHGMHDDTRYRIWIGRAAEQEEEVRVARLMTEAELAIEGRRFE------EAAE 174 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+ +L + AL +S ++ W + Q +K+ Sbjct: 175 RLENLRLSGHRHIAALRLS----------LKVASALGHWEEVLRLARQLRKHKA------ 218 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKAE--- 280 L ++ + + A + L SI A+ + ++ + A Sbjct: 219 --LTDEQAQPVVRRAHVERIRELARDGEALAAYWRSIPAAELGDRHMVEEAVPYLAAAGQ 276 Query: 281 ---------VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +L+ W +A +Y + + G L R + + + L + Sbjct: 277 GALVRKTVERMLDTEWDGG----LARLYAQCANGDAAGCLARGEGWLRKHPKDADLLYAL 332 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI-EQANSHNTDKILY 380 ++ L +A + ++ +AP E L LA + E+ Y Sbjct: 333 GRLCLAAQLWGKAQSYLEASLNLAPTIETHLALAHLFERLERAEEAHTHY 382 >gi|262404854|ref|ZP_06081408.1| HemY-like protein [Vibrio sp. RC586] gi|262348938|gb|EEY98077.1| HemY-like protein [Vibrio sp. RC586] Length = 398 Score = 85.8 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ L + + V I+ NR S ++ + L A L Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L ++ R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + AV + GD +A Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALSTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ + P V + Q Y +W + L + K + N L + Sbjct: 176 TQLQNSYPHNTVVLNLLKQCYQALGQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235 Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 KG H A S KL +M I LI + +A ++++ K Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P E+ + L + + + + E+ + ++ L A Sbjct: 293 PTAELYALLPELNITDRHPLIALLEEALRRDSHNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|283834565|ref|ZP_06354306.1| HemY protein [Citrobacter youngae ATCC 29220] gi|291069695|gb|EFE07804.1| HemY protein [Citrobacter youngae ATCC 29220] Length = 400 Score = 85.0 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 107/365 (29%), Gaps = 11/365 (3%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL + + + R A R Sbjct: 22 MAGHQGYVLIQTDNYNIETSVTGLVIILIVAMVILFAIEWLLRRIFRTGAHTRGWFVGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + LE + + ++A+ K L+++P P V Q Sbjct: 140 QHLERAAELAGNDTIPVEIAR--VRLQLARNENHAARHSVDKLLEVTPRHPEVLRLAEQA 197 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESL 253 Y+ WS + + K +RA+L + D+ Sbjct: 198 YIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWVGLMDQVRADQGSEGLRAWWKNQN 257 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + + + + A+ LI + A+ ++ K + L + N K Sbjct: 258 RKTRHQVALQVAMAEHLIECDDHDTAQQVIIDGLKRQYDDRLVLPIPRLKTNNPEQIEKV 317 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 + + + + + ++ G +A A+K P + LA Sbjct: 318 LRQQIKAVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADALDRLHQ 377 Query: 374 NTDKI 378 + Sbjct: 378 PEEAA 382 >gi|253690344|ref|YP_003019534.1| HemY protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756922|gb|ACT14998.1| HemY protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 399 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 119/365 (32%), Gaps = 9/365 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I N +TS ++ +L F A++ + V R A R Sbjct: 23 VAGHQGYVLIQTDNYDIQTSVTGLVIMLVLFFLAFLAVEWVLRRIFRTGARTRGWFLGRK 82 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A Sbjct: 83 RTRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 140 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + + ++A+ K L+++P P V Q ++ Sbjct: 141 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 200 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254 +S + L +K + R + L ++ + G + Sbjct: 201 RTHAYSALLDILPAMRKINL-YPEARLLDLQQQAYIGLMNQAMADGGSEGLKSWWNNQSR 259 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I + A+ LI + A+ I+ K + + L + N K Sbjct: 260 KVRHEIPLQVAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKVL 319 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + + + + ++ ++ G QA A+++ P + A + Sbjct: 320 HQYTKQHGTTPLLSSTLGQLLMKHGEWQQASDAFRAALELRPDAYDYAWRADALERLHLP 379 Query: 375 TDKIL 379 + Sbjct: 380 DEAAQ 384 >gi|332284593|ref|YP_004416504.1| hypothetical protein PT7_1340 [Pusillimonas sp. T7-7] gi|330428546|gb|AEC19880.1| hypothetical protein PT7_1340 [Pusillimonas sp. T7-7] Length = 511 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 67/501 (13%), Positives = 146/501 (29%), Gaps = 83/501 (16%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + +V I S + + ++ L V + P +R+ Sbjct: 23 EHSGNVLIVAQPWRVELSLTLAVLLILASFVILYCLLRVLAWIGVRPERFRSWRSQRSQK 82 Query: 83 KGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 + ++ L G +++ P A K + +++ + + L L + + +Y Sbjct: 83 REHELLENGWINVLEGRYPDAEKDLSKLLTRSKSKSRKVLAGLASARASQHMGEY----- 137 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV----------- 190 G + A A + +P Sbjct: 138 --------------------------GRRDEALTLARQNAQDNPRLSEATAIVAAEMYLD 171 Query: 191 ----TEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNR---------NRAILLIARSL 234 +A+V + A L + + + +R R +L + ++ Sbjct: 172 QNRPQDALVLLQPLQDATTRYFHATRLLLRAHRQLRNHDRVFELTRLLSRRGVLEKSEAV 231 Query: 235 ENADKGDMIASYHDAIESLK-----LCDN---SIMASICAAKSLISQNKKRKAEVILEKI 286 + + +E K L + ++ AA +Q +A ILE Sbjct: 232 QLIETSAAARLRAGGVEGFKSIWSDLKSDERALPDVALAAADIQTAQGNIDEASKILETG 291 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P + N Y+ E+ +L +A + + + L + + L Q Sbjct: 292 ISARLDPRLLNAYSQCPPEHVARRLSKAEDWLKTHPDDSALLAALGNLCLTGQLWGQGER 351 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406 + +MKI I LL + D + +W ++ A G L Sbjct: 352 YLLRSMKIRSDMRIHALLGNLYDRLGRPNDAMTHWRLASGVA----------GV-----L 396 Query: 407 PLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKV 466 P+ P S++L + + + L + + + + + V Sbjct: 397 PVLPSSRSLPAADTRGDPTLVDVERLPPEAQVLRDMQVPLAASAADFVNDDDFVSAGQPV 456 Query: 467 SSFED-STIHPLDPHIRQPDD 486 + ++ P P ++QP D Sbjct: 457 AGPAGADSVAPATPAVQQPID 477 >gi|311281519|ref|YP_003943750.1| HemY protein [Enterobacter cloacae SCF1] gi|308750714|gb|ADO50466.1| HemY protein [Enterobacter cloacae SCF1] Length = 398 Score = 85.0 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + ++ + + V R L A R Sbjct: 21 IAGHQGYVLIQTDTYNIETSVTGLAIVMILAMAVLFAIEWVLRRLLRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE ++ + TR + ++A+ K L+I+P P V Sbjct: 139 QHLERAAEIAGNDLIPVEITRV-------RLQLARNENHAARHGVDKLLEIAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD----MIASYHD 248 Q Y WS I + K + RA L + D+ + Sbjct: 192 LAEQAYTRTGAWSSLIDIIPSMGKANVVDDAQRAALEQQAWIGLMDQAQANDGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + + L + N Sbjct: 252 WKNQSRKTRHDVALQVAMAEHLIECDDHDTAQQIVIDGLKRHYDDRLLAPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQLKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAFDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRQHQPEEAA 381 >gi|261210175|ref|ZP_05924472.1| HemY-like protein [Vibrio sp. RC341] gi|260840715|gb|EEX67264.1| HemY-like protein [Vibrio sp. RC341] Length = 398 Score = 84.6 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 120/385 (31%), Gaps = 24/385 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ L + + V I+ NR S ++ + L A L Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L ++ R + + G++ + + A K + + H Sbjct: 61 LVKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + AV + GD +A Sbjct: 119 LCYLVASEAANGMGDRAK-RDHYLALAAQQDNATLAVELTR--AKQQLSDGDNTAALTTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ + P V + Q Y EW + L + K + N L + Sbjct: 176 TQLQNSHPHNTVVLSLLNQCYQALGEWQPLLDLLPKLVKAKRLSNEEAQQLELTAQRGML 235 Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 KG H A S KL +M I LI + +A ++++ K Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFI---NQLIERKADYEAFSVIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAK 347 P A +Y L N + LE + + E+ + ++ L A Sbjct: 293 PT---AELYALLPELNIPDRHPLIAVLEDALRRDSNNAEAHSALGQLYLREKHWADAQKH 349 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 350 LEKALSLRSSVSDYAYLADALEKQN 374 >gi|284923905|emb|CBG37004.1| Porphyrin biosynthetic protein [Escherichia coli 042] Length = 398 Score = 84.6 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGTHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|262172876|ref|ZP_06040554.1| HemY-like protein [Vibrio mimicus MB-451] gi|261893952|gb|EEY39938.1| HemY-like protein [Vibrio mimicus MB-451] Length = 398 Score = 84.6 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 118/382 (30%), Gaps = 18/382 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ L + + V I+ NR S ++ + L A L Sbjct: 1 MIRLIFLFVVLGLGLFVGTQYAGQQGYVLISIANRTIEMSVTTLVIFIIAALAALFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + L ++ R + + G++ + + A K + + H Sbjct: 61 VIKKILYTSFHTWNWFSVRKLRRSRRYTNEGIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + AV + GD +A Sbjct: 119 LCYLVASEAANGMGDLAK-RDHYLALAAKQDNATLAVELTR--AKQQLSDGDNEAALNTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 T+ + P V + Q Y +W + L + K + N L + Sbjct: 176 TQLQNSHPHNTVVLNLLKQCYQALSQWQPLLELLPKLVKAKRLTNEEAQQLELTAQRGIL 235 Query: 238 -----DKGDMIASYHDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 KG H A S KL +M I LI + +A ++++ K Sbjct: 236 QSIASQKGSEGLVQHWAQMSRKLKAEPELLMCFIT---QLIQRKADYEAFSVIKESLKKQ 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P E+ + L + + + + E+ + ++ L A Sbjct: 293 PTAELYALLPELNITDRHPLIALLEDALRRDSNNAEAHSALGQLYLREKHWADAQKHLEK 352 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 353 ALSLRSSVSDYAYLADALEKQN 374 >gi|254039013|ref|ZP_04873064.1| HemY protein [Escherichia sp. 1_1_43] gi|226838704|gb|EEH70732.1| HemY protein [Escherichia sp. 1_1_43] Length = 398 Score = 84.6 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QYLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|293393885|ref|ZP_06638192.1| porphoryin biosynthesis protein HemY [Serratia odorifera DSM 4582] gi|291423712|gb|EFE96934.1| porphoryin biosynthesis protein HemY [Serratia odorifera DSM 4582] Length = 397 Score = 84.6 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 112/364 (30%), Gaps = 7/364 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + + +++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNIETSVTGLAIMGILLFVVLLVIEWILRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RSRARKQTKAALIKLAEGDYKQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDDFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE + T + V + G+ ++A+ + L+ +P P V Q Y+ Sbjct: 139 QYLERAAEAADTDQLPVDITRVRIQLAQGEAHAARHGVDRLLNQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++ + L + ++ + I + + + Sbjct: 199 RTGGYASLLEILPSMSKINLHSEEQLQALQQQAYIGLMNQAMADEGSEGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + + I + LI N A+ I+ K + + + S N K Sbjct: 259 TRHEVPLQIAMVEHLIECNDHDMAQEIVIDSLKRQYDERLVLLIPRIKSGNAQQLEKALR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ ++ G QA A+K P + LA + + + Sbjct: 319 QQIKQHGATPLLNSTLGQLLIKHGEWQQASDAFREALKQRPDAYDYAWLADVLEKLHRSE 378 Query: 376 DKIL 379 + Sbjct: 379 EAAQ 382 >gi|319779682|ref|YP_004130595.1| HemY-like protein [Taylorella equigenitalis MCE9] gi|317109706|gb|ADU92452.1| HemY-like protein [Taylorella equigenitalis MCE9] Length = 444 Score = 84.6 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 56/395 (14%), Positives = 130/395 (32%), Gaps = 14/395 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +++LI +F + ++ F + V + GN S + L LLF Sbjct: 4 LIKLIIFFGLAIGLVLIFK---DNNDVVMLVTGNERRTVSLLTAVVFLLVAFLTLYLLFR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNE 119 + + LS P + +R++ K L G + + A K ++ + + Sbjct: 61 ILSWILSRPKAVADWSEERHHKKDIILLERGWVDLLEGRHYDAEKNFLKLTHHTKSTDRQ 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLE--MMLQIPATRE----FAVYS-LYFESCRIGDLNS 172 L + + A Y + L+ +L + AV + L E G ++ Sbjct: 121 ILANIGAARAVHAIGDYARRDDLLKDARLLSKNNPKLDAAVVAVQADLLIE---QGQAHN 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A Y A + + +++ Y + ++ + + LL Sbjct: 178 ALMYLEYADSVDGRQLHIKHQLLRAYEQTDQETKLLDTARFLFRKKSISKEEYMDLLDEF 237 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + + + K ++ ++ + K+ LE Sbjct: 238 GPKFISRSKYDGAVNFYNSLSKEEKQLENIALAISRRFDQLEEYSKSSQALETSLNAKLS 297 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 P + Y +L +A + + + + L+ + ++ L QA ++ Sbjct: 298 PSVLAYYARAHESVANERLHKAQKWLNADANNPDLLLAIGQLCLANSLWGQAEKYLNQSL 357 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 KI ++I LL + ++ + +W +++L Sbjct: 358 KIKDNEKIHALLGVLYDKQGEHSKALSHWRKASLS 392 >gi|126176190|ref|YP_001052339.1| HemY domain-containing protein [Shewanella baltica OS155] gi|125999395|gb|ABN63470.1| HemY domain protein [Shewanella baltica OS155] Length = 388 Score = 84.2 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 55/396 (13%), Positives = 130/396 (32%), Gaps = 32/396 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59 M++++ + ++ + +C + V I G+ TS + L F + +L + Sbjct: 1 MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60 Query: 60 AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117 V + +R K + + G +++A + P A R M Sbjct: 61 LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPA 118 Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 L Q IA ++ A + TR + D Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGKLALARAELD-- 176 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228 + A + +P ++ Y ++W A+ L +K++ + N + Sbjct: 177 ---KLAPTSKSKAPLLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228 Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L + + S + + A L N+K +A ++ Sbjct: 229 ATNCALLKGAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 K + +P + + + + K+ L+ E ++ + + + ++K+ + + +A Sbjct: 286 KKLRTSPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++ P K +L LA+I++ Sbjct: 346 RSCLQNVCRLEPTKNSWLALARIQE-QLGEQGHANQ 380 >gi|153002484|ref|YP_001368165.1| HemY domain-containing protein [Shewanella baltica OS185] gi|151367102|gb|ABS10102.1| HemY domain protein [Shewanella baltica OS185] Length = 388 Score = 84.2 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 57/403 (14%), Positives = 134/403 (33%), Gaps = 32/403 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLF 59 M++++ + ++ + +C + V I G+ TS + L F + +L + Sbjct: 1 MIKILIFLGIVLIGLCISPWLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEW 60 Query: 60 AVSRFFLS-CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFH 117 V + +R K + + G +++A + P A R M Sbjct: 61 LVISAINLMLRSRFIPHHWRRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPA 118 Query: 118 NEYLVYLLEVQ----IALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 L Q IA ++ A + TR + D Sbjct: 119 LNLLAAARAAQYQQKIAERDQYLDRAAAQPLAANAVATTRTRYLLKQGELALARTELD-- 176 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAIL 228 + A + +P ++ Y ++W A+ L +K++ + N + Sbjct: 177 ---KLAPTSKSKAPVLKLA----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNI 228 Query: 229 LIARSLENADKGDMIASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L A + + S + + A L N+K +A ++ Sbjct: 229 ATNCALLKAAAIKGEEALEQCWQWLSRSERNQSEFL---AIYAMGLCRFNRKDQALKLIA 285 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 K + P + + + + K+ L+ E ++ + + + ++K+ + + +A Sbjct: 286 KKLRTAPESALLHAIPEIATAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEA 345 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + ++ P K +L LA+I++ + A++ Sbjct: 346 RSCLQNVCRLEPTKASWLALARIQE-QLGEQANANQSYRQAVN 387 >gi|237727918|ref|ZP_04558399.1| HemY [Citrobacter sp. 30_2] gi|226910367|gb|EEH96285.1| HemY [Citrobacter sp. 30_2] Length = 399 Score = 83.8 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 108/365 (29%), Gaps = 11/365 (3%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLVIILIVAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + LE + + ++A+ K L+++P P V Q Sbjct: 139 QHLERAAELAGNDTIPVEIAR--VRLQLARNENHAARHSVDKLLEVTPRHPEVLRLAEQA 196 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESL 253 Y+ WS + + K + +RA+L + D+ Sbjct: 197 YIRTGAWSSLLDIIPSMAKARVGDDEHRAMLEQQAWVGLMDQVRADQGSEGLRAWWKNQS 256 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + + + + A+ LI + A+ ++ K + L + N K Sbjct: 257 RKTRHQVALQVAMAEHLIECDDHDTAQQVIIDGLKRQYDDRLVLPIPRLKTNNPEQIEKV 316 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 + + + + + ++ G +A A+K P + LA Sbjct: 317 LRQQIKAVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADALDRLHQ 376 Query: 374 NTDKI 378 + Sbjct: 377 PEEAA 381 >gi|170022175|ref|YP_001727129.1| putative protoheme IX biogenesis protein [Escherichia coli ATCC 8739] gi|188492123|ref|ZP_02999393.1| HemY protein [Escherichia coli 53638] gi|194434057|ref|ZP_03066327.1| HemY protein [Shigella dysenteriae 1012] gi|312971916|ref|ZP_07786090.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] gi|169757103|gb|ACA79802.1| HemY protein [Escherichia coli ATCC 8739] gi|188487322|gb|EDU62425.1| HemY protein [Escherichia coli 53638] gi|194417715|gb|EDX33814.1| HemY protein [Shigella dysenteriae 1012] gi|309704237|emb|CBJ03585.1| Porphyrin biosynthetic protein [Escherichia coli ETEC H10407] gi|310334293|gb|EFQ00498.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] gi|320178093|gb|EFW53073.1| putative protoheme IX biogenesis protein [Shigella boydii ATCC 9905] gi|323934190|gb|EGB30621.1| hemY protein [Escherichia coli E1520] gi|332084958|gb|EGI90140.1| tetratricopeptide repeat family protein [Shigella dysenteriae 155-74] gi|332345780|gb|AEE59114.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 398 Score = 83.8 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|22124293|ref|NP_667716.1| putative protoheme IX biogenesis protein [Yersinia pestis KIM 10] gi|45442946|ref|NP_994485.1| putative protoheme IX biogenesis protein [Yersinia pestis biovar Microtus str. 91001] gi|108806167|ref|YP_650083.1| putative protoheme IX biogenesis protein [Yersinia pestis Antiqua] gi|108810277|ref|YP_646044.1| putative protoheme IX biogenesis protein [Yersinia pestis Nepal516] gi|145600720|ref|YP_001164796.1| putative protoheme IX biogenesis protein [Yersinia pestis Pestoides F] gi|153997092|ref|ZP_02022225.1| putative protoheme IX biogenesis protein [Yersinia pestis CA88-4125] gi|162421056|ref|YP_001605126.1| putative protoheme IX biogenesis protein [Yersinia pestis Angola] gi|165926307|ref|ZP_02222139.1| hemY protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165939155|ref|ZP_02227706.1| hemY protein [Yersinia pestis biovar Orientalis str. IP275] gi|166011693|ref|ZP_02232591.1| hemY protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213543|ref|ZP_02239578.1| hemY protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167401885|ref|ZP_02307373.1| hemY protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421107|ref|ZP_02312860.1| hemY protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426282|ref|ZP_02318035.1| hemY protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218930855|ref|YP_002348730.1| putative protoheme IX biogenesis protein [Yersinia pestis CO92] gi|229837185|ref|ZP_04457350.1| predicted protoheme IX synthesis protein [Yersinia pestis Pestoides A] gi|229839545|ref|ZP_04459704.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900108|ref|ZP_04515245.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar Orientalis str. India 195] gi|229900446|ref|ZP_04515575.1| predicted protoheme IX synthesis protein [Yersinia pestis Nepal516] gi|270488801|ref|ZP_06205875.1| HemY protein [Yersinia pestis KIM D27] gi|294505515|ref|YP_003569577.1| putative protoheme IX biogenesis protein [Yersinia pestis Z176003] gi|21957064|gb|AAM83967.1|AE013638_5 hemY protein [Yersinia pestis KIM 10] gi|45437813|gb|AAS63362.1| putative protoheme IX biogenesis protein [Yersinia pestis biovar Microtus str. 91001] gi|108773925|gb|ABG16444.1| protoheme IX biogenesis protein [Yersinia pestis Nepal516] gi|108778080|gb|ABG12138.1| putative protoheme IX biogenesis protein [Yersinia pestis Antiqua] gi|115349466|emb|CAL22439.1| putative protoheme IX biogenesis protein [Yersinia pestis CO92] gi|145212416|gb|ABP41823.1| protoheme IX biogenesis protein [Yersinia pestis Pestoides F] gi|149289398|gb|EDM39476.1| putative protoheme IX biogenesis protein [Yersinia pestis CA88-4125] gi|162353871|gb|ABX87819.1| hemY protein [Yersinia pestis Angola] gi|165912928|gb|EDR31554.1| hemY protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921831|gb|EDR39028.1| hemY protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989462|gb|EDR41763.1| hemY protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205216|gb|EDR49696.1| hemY protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961236|gb|EDR57257.1| hemY protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048778|gb|EDR60186.1| hemY protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054801|gb|EDR64605.1| hemY protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682465|gb|EEO78552.1| predicted protoheme IX synthesis protein [Yersinia pestis Nepal516] gi|229686888|gb|EEO78967.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695911|gb|EEO85958.1| predicted protoheme IX synthesis protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706128|gb|EEO92137.1| predicted protoheme IX synthesis protein [Yersinia pestis Pestoides A] gi|262363581|gb|ACY60302.1| putative protoheme IX biogenesis protein [Yersinia pestis D106004] gi|262367509|gb|ACY64066.1| putative protoheme IX biogenesis protein [Yersinia pestis D182038] gi|270337305|gb|EFA48082.1| HemY protein [Yersinia pestis KIM D27] gi|294355974|gb|ADE66315.1| putative protoheme IX biogenesis protein [Yersinia pestis Z176003] gi|320013547|gb|ADV97118.1| putative protoheme IX synthesis protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 406 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 114/365 (31%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + +L L A+ ++ V R A R Sbjct: 21 LAGHQGYVLIQTDNYNVTTSVTGLAIMLVLLLVAFFIVEWVLRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARNQMKAALIKLAEGDFLQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADGDQLPVNITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESLKL 255 + + + L K A L + ++ + + Sbjct: 199 RSGAYRSLLDILPAMSKTQIHTPEEVAALEQQAYIGIMNQCMADEGSEGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K +A + L + N K Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQKIILDSLKHQYDERLALLIPRLKAGNPEPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|269961543|ref|ZP_06175906.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833772|gb|EEZ87868.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 393 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 58/383 (15%), Positives = 122/383 (31%), Gaps = 20/383 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N S ++ + L A L Sbjct: 1 MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANTTIEMSVTTLVIFVIAALAALFFLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + G++ + + A K + + H Sbjct: 61 LVKKLVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + ++ + AV + R + SA Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRDNEFESAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 AL + +++ Y+ K W I + Q K +A L+ Sbjct: 176 Q-ALKDQYANNSIVLNLLKTTYMQLKLWQPLIDLMPQLSKAKLVTEEEQAELIQKAQCGL 234 Query: 237 ADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + I +K + I C A LIS+ A ++++ K Sbjct: 235 LHEVAQQQGSEGLISHWNGLPRKVKQDAHLI---GCFAHELISRKADNDAFTVIKEALKK 291 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +P PE+ + L ++ + + + E+ + ++ +A Sbjct: 292 SPTPELYQLLPELNLPDSHPVIVFLEGVLKREPENAAAQSALAHFFFRQEKWQEAQEHFE 351 Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372 +A+K+ + LA + + Sbjct: 352 VALKLRSDVSDYAYLADTLEKQN 374 >gi|170682558|ref|YP_001746118.1| putative protoheme IX biogenesis protein [Escherichia coli SMS-3-5] gi|300939980|ref|ZP_07154608.1| HemY protein [Escherichia coli MS 21-1] gi|170520276|gb|ACB18454.1| HemY protein [Escherichia coli SMS-3-5] gi|300455184|gb|EFK18677.1| HemY protein [Escherichia coli MS 21-1] Length = 398 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|156972665|ref|YP_001443572.1| heme biosynthesis protein [Vibrio harveyi ATCC BAA-1116] gi|156524259|gb|ABU69345.1| hypothetical protein VIBHAR_00317 [Vibrio harveyi ATCC BAA-1116] Length = 393 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 59/383 (15%), Positives = 124/383 (32%), Gaps = 20/383 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N+ S ++ + L A L Sbjct: 1 MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIATLAALFFLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + + + ++ R + + G++ + + A K + + H Sbjct: 61 VVKKVVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + ++ + AV + R + SA Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRDNEFESAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 AL + +++ Y+ K W I + Q K +A L+ Sbjct: 176 Q-ALKGQYANNSIVLNLLKTTYMQLKLWQPLIDLMPQLSKAKLVTEEEQAELIQKAQCGL 234 Query: 237 ADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + I +K + I C A LIS+ +A ++++ K Sbjct: 235 LHEVAQQQGSEGLISHWSGLPRKVKQDAHLI---GCFAHELISRKADNEAFTVIKEALKK 291 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +P PE+ + L ++ + + + E+ + ++ +A Sbjct: 292 SPTPELYQLLPELNLPDSHPVIVFLEGVLKREPENAAAQSALAHFFFRQEKWQEAQEHFE 351 Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372 +A+K+ + LA + + Sbjct: 352 VALKLRSDVSDYAYLADTLEKQN 374 >gi|331665447|ref|ZP_08366346.1| HemY protein [Escherichia coli TA143] gi|331057345|gb|EGI29334.1| HemY protein [Escherichia coli TA143] Length = 398 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKTHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|227114733|ref|ZP_03828389.1| putative protoheme IX biogenesis protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 399 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 118/365 (32%), Gaps = 9/365 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I N +TS ++ +L F A++ + V R + R Sbjct: 23 VAGHQGYVLIQTDNYDIQTSVTGLVIMLILFFLAFLAVEWVLRRIFRTGSRTRGWFLGRK 82 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A Sbjct: 83 RTRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 140 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + + ++A+ K L+++P P V Q ++ Sbjct: 141 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 200 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254 +S + L +K + R + L ++ + G + Sbjct: 201 RTHAYSALLDILPAMRKINL-YPEQRLLDLQQQAYIGLMNQAMADGGSEGLKSWWNNQSR 259 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I + A+ LI + A+ I+ K + + L + N K Sbjct: 260 KVRHEIPLQVAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKVL 319 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + + + + ++ ++ G QA A+++ P + A Sbjct: 320 HQYIKQHGATPLLSSTLGQLLMKHGEWQQASDAFRTALELRPDAYDYAWRADALDRLRLP 379 Query: 375 TDKIL 379 + Sbjct: 380 DEAAQ 384 >gi|218550976|ref|YP_002384767.1| protoheme IX biogenesis protein [Escherichia fergusonii ATCC 35469] gi|218358517|emb|CAQ91164.1| putative protoheme IX synthesis protein [Escherichia fergusonii ATCC 35469] Length = 398 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+I+P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEITPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADDGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|15804390|ref|NP_290430.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 EDL933] gi|15833986|ref|NP_312759.1| protoheme IX biogenesis protein [Escherichia coli O157:H7 str. Sakai] gi|16131654|ref|NP_418246.1| predicted protoheme IX synthesis protein [Escherichia coli str. K-12 substr. MG1655] gi|24115094|ref|NP_709604.1| putative protoheme IX biogenesis protein [Shigella flexneri 2a str. 301] gi|26250540|ref|NP_756580.1| putative protoheme IX biogenesis protein [Escherichia coli CFT073] gi|30064905|ref|NP_839076.1| putative protoheme IX biogenesis protein [Shigella flexneri 2a str. 2457T] gi|74314313|ref|YP_312732.1| putative protoheme IX biogenesis protein [Shigella sonnei Ss046] gi|82546153|ref|YP_410100.1| protoheme IX biogenesis protein [Shigella boydii Sb227] gi|89110218|ref|AP_003998.1| predicted protoheme IX synthesis protein [Escherichia coli str. K-12 substr. W3110] gi|91213323|ref|YP_543309.1| putative protoheme IX biogenesis protein [Escherichia coli UTI89] gi|110644125|ref|YP_671855.1| putative protoheme IX biogenesis protein [Escherichia coli 536] gi|110807510|ref|YP_691030.1| putative protoheme IX biogenesis protein [Shigella flexneri 5 str. 8401] gi|117626059|ref|YP_859382.1| putative protoheme IX biogenesis protein [Escherichia coli APEC O1] gi|157157643|ref|YP_001465283.1| putative protoheme IX biogenesis protein [Escherichia coli E24377A] gi|157163275|ref|YP_001460593.1| putative protoheme IX biogenesis protein [Escherichia coli HS] gi|168750389|ref|ZP_02775411.1| HemY protein [Escherichia coli O157:H7 str. EC4113] gi|168753696|ref|ZP_02778703.1| HemY protein [Escherichia coli O157:H7 str. EC4401] gi|168764120|ref|ZP_02789127.1| HemY protein [Escherichia coli O157:H7 str. EC4501] gi|168768080|ref|ZP_02793087.1| HemY protein [Escherichia coli O157:H7 str. EC4486] gi|168775650|ref|ZP_02800657.1| HemY protein [Escherichia coli O157:H7 str. EC4196] gi|168780698|ref|ZP_02805705.1| HemY protein [Escherichia coli O157:H7 str. EC4076] gi|168786637|ref|ZP_02811644.1| HemY protein [Escherichia coli O157:H7 str. EC869] gi|168801137|ref|ZP_02826144.1| HemY protein [Escherichia coli O157:H7 str. EC508] gi|170083286|ref|YP_001732606.1| protoheme IX synthesis protein [Escherichia coli str. K-12 substr. DH10B] gi|187730910|ref|YP_001882495.1| putative protoheme IX biogenesis protein [Shigella boydii CDC 3083-94] gi|191166115|ref|ZP_03027950.1| HemY protein [Escherichia coli B7A] gi|191174262|ref|ZP_03035771.1| HemY protein [Escherichia coli F11] gi|193065682|ref|ZP_03046747.1| HemY protein [Escherichia coli E22] gi|193068034|ref|ZP_03048999.1| HemY protein [Escherichia coli E110019] gi|194429198|ref|ZP_03061726.1| HemY protein [Escherichia coli B171] gi|194438665|ref|ZP_03070753.1| HemY protein [Escherichia coli 101-1] gi|195938088|ref|ZP_03083470.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 str. EC4024] gi|208806268|ref|ZP_03248605.1| HemY protein [Escherichia coli O157:H7 str. EC4206] gi|208812847|ref|ZP_03254176.1| HemY protein [Escherichia coli O157:H7 str. EC4045] gi|208820041|ref|ZP_03260361.1| HemY protein [Escherichia coli O157:H7 str. EC4042] gi|209395966|ref|YP_002273318.1| HemY protein [Escherichia coli O157:H7 str. EC4115] gi|209921274|ref|YP_002295358.1| putative protoheme IX biogenesis protein [Escherichia coli SE11] gi|217324425|ref|ZP_03440509.1| HemY protein [Escherichia coli O157:H7 str. TW14588] gi|218556361|ref|YP_002389275.1| putative protoheme IX biogenesis protein [Escherichia coli IAI1] gi|218560865|ref|YP_002393778.1| protoheme IX biogenesis protein [Escherichia coli S88] gi|218692078|ref|YP_002400290.1| putative protoheme IX biogenesis protein [Escherichia coli ED1a] gi|227888616|ref|ZP_04006421.1| possible porphoryin biosynthesis protein HemY [Escherichia coli 83972] gi|237702809|ref|ZP_04533290.1| HemY protein [Escherichia sp. 3_2_53FAA] gi|238902879|ref|YP_002928675.1| putative protoheme IX synthesis protein [Escherichia coli BW2952] gi|253775575|ref|YP_003038406.1| protoheme IX biogenesis protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163743|ref|YP_003046851.1| putative protoheme IX biogenesis protein [Escherichia coli B str. REL606] gi|254795798|ref|YP_003080635.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 str. TW14359] gi|256021458|ref|ZP_05435323.1| putative protoheme IX biogenesis protein [Shigella sp. D9] gi|256026148|ref|ZP_05440013.1| putative protoheme IX biogenesis protein [Escherichia sp. 4_1_40B] gi|260846425|ref|YP_003224203.1| putative protoheme IX synthesis protein HemY [Escherichia coli O103:H2 str. 12009] gi|260857795|ref|YP_003231686.1| putative protoheme IX synthesis protein HemY [Escherichia coli O26:H11 str. 11368] gi|260870524|ref|YP_003236926.1| putative protoheme IX synthesis protein HemY [Escherichia coli O111:H- str. 11128] gi|261225574|ref|ZP_05939855.1| predicted protoheme IX synthesis protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255620|ref|ZP_05948153.1| putative protoheme IX synthesis protein HemY [Escherichia coli O157:H7 str. FRIK966] gi|291285215|ref|YP_003502033.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7 str. CB9615] gi|293417265|ref|ZP_06659890.1| hemY protein [Escherichia coli B185] gi|293468116|ref|ZP_06664528.1| hemY protein [Escherichia coli B088] gi|300818729|ref|ZP_07098936.1| HemY protein [Escherichia coli MS 107-1] gi|300823333|ref|ZP_07103464.1| HemY protein [Escherichia coli MS 119-7] gi|300904055|ref|ZP_07121935.1| HemY protein [Escherichia coli MS 84-1] gi|300923301|ref|ZP_07139349.1| HemY protein [Escherichia coli MS 182-1] gi|300930034|ref|ZP_07145466.1| HemY protein [Escherichia coli MS 187-1] gi|300950435|ref|ZP_07164357.1| HemY protein [Escherichia coli MS 116-1] gi|300955194|ref|ZP_07167591.1| HemY protein [Escherichia coli MS 175-1] gi|300979361|ref|ZP_07174519.1| HemY protein [Escherichia coli MS 200-1] gi|300985717|ref|ZP_07177572.1| HemY protein [Escherichia coli MS 45-1] gi|301029017|ref|ZP_07192171.1| HemY protein [Escherichia coli MS 196-1] gi|301047319|ref|ZP_07194405.1| HemY protein [Escherichia coli MS 185-1] gi|301303696|ref|ZP_07209817.1| HemY protein [Escherichia coli MS 124-1] gi|301328441|ref|ZP_07221522.1| HemY protein [Escherichia coli MS 78-1] gi|301646132|ref|ZP_07246032.1| HemY protein [Escherichia coli MS 146-1] gi|306815162|ref|ZP_07449315.1| putative protoheme IX biogenesis protein [Escherichia coli NC101] gi|307140500|ref|ZP_07499856.1| putative protoheme IX biogenesis protein [Escherichia coli H736] gi|307313624|ref|ZP_07593244.1| HemY protein [Escherichia coli W] gi|309796259|ref|ZP_07690669.1| HemY protein [Escherichia coli MS 145-7] gi|331644535|ref|ZP_08345655.1| HemY protein [Escherichia coli H736] gi|331649626|ref|ZP_08350708.1| HemY protein [Escherichia coli M605] gi|331655484|ref|ZP_08356477.1| HemY protein [Escherichia coli M718] gi|331660145|ref|ZP_08361081.1| HemY protein [Escherichia coli TA206] gi|331670645|ref|ZP_08371482.1| HemY protein [Escherichia coli TA271] gi|331679909|ref|ZP_08380572.1| HemY protein [Escherichia coli H591] gi|331685519|ref|ZP_08386103.1| HemY protein [Escherichia coli H299] gi|332282693|ref|ZP_08395106.1| hemY [Shigella sp. D9] gi|81170791|sp|P0ACB9|HEMY_ECO57 RecName: Full=Protein hemY gi|81170792|sp|P0ACB8|HEMY_ECOL6 RecName: Full=Protein hemY gi|81170793|sp|P0ACB7|HEMY_ECOLI RecName: Full=Protein hemY gi|81170794|sp|P0ACC0|HEMY_SHIFL RecName: Full=Protein hemY gi|12518666|gb|AAG58994.1|AE005611_4 a late step of protoheme IX synthesis [Escherichia coli O157:H7 str. EDL933] gi|26110970|gb|AAN83154.1|AE016769_269 HemY protein [Escherichia coli CFT073] gi|41669|emb|CAA31135.1| unnamed protein product [Escherichia coli] gi|148201|gb|AAA67598.1| HemY [Escherichia coli str. K-12 substr. MG1655] gi|1790234|gb|AAC76805.1| predicted protoheme IX synthesis protein [Escherichia coli str. K-12 substr. MG1655] gi|13364208|dbj|BAB38155.1| HemY protein [Escherichia coli O157:H7 str. Sakai] gi|24054361|gb|AAN45311.1| HemY protein [Shigella flexneri 2a str. 301] gi|30043165|gb|AAP18887.1| HemY protein [Shigella flexneri 2a str. 2457T] gi|73857790|gb|AAZ90497.1| HemY [Shigella sonnei Ss046] gi|81247564|gb|ABB68272.1| HemY [Shigella boydii Sb227] gi|85676249|dbj|BAE77499.1| predicted protoheme IX synthesis protein [Escherichia coli str. K12 substr. W3110] gi|91074897|gb|ABE09778.1| protoheme IX synthesis late stage protein [Escherichia coli UTI89] gi|110345717|gb|ABG71954.1| HemY protein [Escherichia coli 536] gi|110617058|gb|ABF05725.1| a late step of protoheme IX synthesis [Shigella flexneri 5 str. 8401] gi|115515183|gb|ABJ03258.1| putative protoheme IX synthesis protein [Escherichia coli APEC O1] gi|157068955|gb|ABV08210.1| HemY protein [Escherichia coli HS] gi|157079673|gb|ABV19381.1| HemY protein [Escherichia coli E24377A] gi|169891121|gb|ACB04828.1| predicted protoheme IX synthesis protein [Escherichia coli str. K-12 substr. DH10B] gi|187427902|gb|ACD07176.1| HemY protein [Shigella boydii CDC 3083-94] gi|187768897|gb|EDU32741.1| HemY protein [Escherichia coli O157:H7 str. EC4196] gi|188015423|gb|EDU53545.1| HemY protein [Escherichia coli O157:H7 str. EC4113] gi|189001497|gb|EDU70483.1| HemY protein [Escherichia coli O157:H7 str. EC4076] gi|189359244|gb|EDU77663.1| HemY protein [Escherichia coli O157:H7 str. EC4401] gi|189362676|gb|EDU81095.1| HemY protein [Escherichia coli O157:H7 str. EC4486] gi|189365804|gb|EDU84220.1| HemY protein [Escherichia coli O157:H7 str. EC4501] gi|189373465|gb|EDU91881.1| HemY protein [Escherichia coli O157:H7 str. EC869] gi|189376694|gb|EDU95110.1| HemY protein [Escherichia coli O157:H7 str. EC508] gi|190903891|gb|EDV63605.1| HemY protein [Escherichia coli B7A] gi|190905445|gb|EDV65075.1| HemY protein [Escherichia coli F11] gi|192926649|gb|EDV81278.1| HemY protein [Escherichia coli E22] gi|192958654|gb|EDV89092.1| HemY protein [Escherichia coli E110019] gi|194412710|gb|EDX29004.1| HemY protein [Escherichia coli B171] gi|194422469|gb|EDX38468.1| HemY protein [Escherichia coli 101-1] gi|208726069|gb|EDZ75670.1| HemY protein [Escherichia coli O157:H7 str. EC4206] gi|208734124|gb|EDZ82811.1| HemY protein [Escherichia coli O157:H7 str. EC4045] gi|208740164|gb|EDZ87846.1| HemY protein [Escherichia coli O157:H7 str. EC4042] gi|209157366|gb|ACI34799.1| HemY protein [Escherichia coli O157:H7 str. EC4115] gi|209753328|gb|ACI74971.1| uroporphyrinogen III methylase [Escherichia coli] gi|209753330|gb|ACI74972.1| uroporphyrinogen III methylase [Escherichia coli] gi|209753332|gb|ACI74973.1| uroporphyrinogen III methylase [Escherichia coli] gi|209753334|gb|ACI74974.1| uroporphyrinogen III methylase [Escherichia coli] gi|209753336|gb|ACI74975.1| uroporphyrinogen III methylase [Escherichia coli] gi|209914533|dbj|BAG79607.1| porphyrin biosynthetic protein [Escherichia coli SE11] gi|217320646|gb|EEC29070.1| HemY protein [Escherichia coli O157:H7 str. TW14588] gi|218363130|emb|CAR00771.1| putative protoheme IX synthesis protein [Escherichia coli IAI1] gi|218367634|emb|CAR05417.1| putative protoheme IX synthesis protein [Escherichia coli S88] gi|218429642|emb|CAR10605.2| putative protoheme IX synthesis protein [Escherichia coli ED1a] gi|222035500|emb|CAP78245.1| Protein hemY [Escherichia coli LF82] gi|226902980|gb|EEH89239.1| HemY protein [Escherichia sp. 3_2_53FAA] gi|227834455|gb|EEJ44921.1| possible porphoryin biosynthesis protein HemY [Escherichia coli 83972] gi|238863057|gb|ACR65055.1| predicted protoheme IX synthesis protein [Escherichia coli BW2952] gi|242379332|emb|CAQ34143.1| predicted protoheme IX synthesis protein [Escherichia coli BL21(DE3)] gi|253326619|gb|ACT31221.1| HemY protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975644|gb|ACT41315.1| predicted protoheme IX synthesis protein [Escherichia coli B str. REL606] gi|253979800|gb|ACT45470.1| predicted protoheme IX synthesis protein [Escherichia coli BL21(DE3)] gi|254595198|gb|ACT74559.1| predicted protoheme IX synthesis protein [Escherichia coli O157:H7 str. TW14359] gi|257756444|dbj|BAI27946.1| predicted protoheme IX synthesis protein HemY [Escherichia coli O26:H11 str. 11368] gi|257761572|dbj|BAI33069.1| predicted protoheme IX synthesis protein HemY [Escherichia coli O103:H2 str. 12009] gi|257766880|dbj|BAI38375.1| predicted protoheme IX synthesis protein HemY [Escherichia coli O111:H- str. 11128] gi|260451355|gb|ACX41777.1| HemY protein [Escherichia coli DH1] gi|281180850|dbj|BAI57180.1| porphyrin biosynthetic protein [Escherichia coli SE15] gi|281603191|gb|ADA76175.1| A late step of protoheme IX synthesis [Shigella flexneri 2002017] gi|290765088|gb|ADD59049.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7 str. CB9615] gi|291321494|gb|EFE60932.1| hemY protein [Escherichia coli B088] gi|291431033|gb|EFF04028.1| hemY protein [Escherichia coli B185] gi|294492014|gb|ADE90770.1| HemY protein [Escherichia coli IHE3034] gi|299878011|gb|EFI86222.1| HemY protein [Escherichia coli MS 196-1] gi|300300838|gb|EFJ57223.1| HemY protein [Escherichia coli MS 185-1] gi|300308033|gb|EFJ62553.1| HemY protein [Escherichia coli MS 200-1] gi|300317911|gb|EFJ67695.1| HemY protein [Escherichia coli MS 175-1] gi|300403935|gb|EFJ87473.1| HemY protein [Escherichia coli MS 84-1] gi|300407991|gb|EFJ91529.1| HemY protein [Escherichia coli MS 45-1] gi|300420387|gb|EFK03698.1| HemY protein [Escherichia coli MS 182-1] gi|300450242|gb|EFK13862.1| HemY protein [Escherichia coli MS 116-1] gi|300462067|gb|EFK25560.1| HemY protein [Escherichia coli MS 187-1] gi|300524119|gb|EFK45188.1| HemY protein [Escherichia coli MS 119-7] gi|300528695|gb|EFK49757.1| HemY protein [Escherichia coli MS 107-1] gi|300840996|gb|EFK68756.1| HemY protein [Escherichia coli MS 124-1] gi|300845151|gb|EFK72911.1| HemY protein [Escherichia coli MS 78-1] gi|301075658|gb|EFK90464.1| HemY protein [Escherichia coli MS 146-1] gi|305851531|gb|EFM51985.1| putative protoheme IX biogenesis protein [Escherichia coli NC101] gi|306906605|gb|EFN37117.1| HemY protein [Escherichia coli W] gi|307555926|gb|ADN48701.1| HemY protein [Escherichia coli ABU 83972] gi|307628863|gb|ADN73167.1| putative protoheme IX biogenesis protein [Escherichia coli UM146] gi|308120141|gb|EFO57403.1| HemY protein [Escherichia coli MS 145-7] gi|312948355|gb|ADR29182.1| putative protoheme IX biogenesis protein [Escherichia coli O83:H1 str. NRG 857C] gi|313647160|gb|EFS11615.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str. 2457T] gi|315063094|gb|ADT77421.1| predicted protoheme IX synthesis protein [Escherichia coli W] gi|315138378|dbj|BAJ45537.1| putative protoheme IX biogenesis protein [Escherichia coli DH1] gi|315254165|gb|EFU34133.1| HemY protein [Escherichia coli MS 85-1] gi|315284726|gb|EFU44171.1| HemY protein [Escherichia coli MS 110-3] gi|315293158|gb|EFU52510.1| HemY protein [Escherichia coli MS 153-1] gi|315296780|gb|EFU56072.1| HemY protein [Escherichia coli MS 16-3] gi|315618501|gb|EFU99087.1| tetratricopeptide repeat family protein [Escherichia coli 3431] gi|320176043|gb|EFW51112.1| putative protoheme IX biogenesis protein [Shigella dysenteriae CDC 74-1112] gi|320185462|gb|EFW60231.1| putative protoheme IX biogenesis protein [Shigella flexneri CDC 796-83] gi|320191106|gb|EFW65756.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 str. EC1212] gi|320639284|gb|EFX08906.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 str. G5101] gi|320644669|gb|EFX13719.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H- str. 493-89] gi|320649994|gb|EFX18497.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H- str. H 2687] gi|320655340|gb|EFX23282.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660966|gb|EFX28409.1| putative protoheme IX biogenesis protein [Escherichia coli O55:H7 str. USDA 5905] gi|320666089|gb|EFX33103.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 str. LSU-61] gi|323155203|gb|EFZ41387.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14] gi|323161137|gb|EFZ47055.1| tetratricopeptide repeat family protein [Escherichia coli E128010] gi|323167549|gb|EFZ53255.1| tetratricopeptide repeat family protein [Shigella sonnei 53G] gi|323173416|gb|EFZ59045.1| tetratricopeptide repeat family protein [Escherichia coli LT-68] gi|323177811|gb|EFZ63395.1| tetratricopeptide repeat family protein [Escherichia coli 1180] gi|323182573|gb|EFZ67977.1| tetratricopeptide repeat family protein [Escherichia coli 1357] gi|323189478|gb|EFZ74758.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1] gi|323380842|gb|ADX53110.1| HemY protein [Escherichia coli KO11] gi|323938938|gb|EGB35157.1| hemY protein [Escherichia coli E482] gi|323943799|gb|EGB39894.1| hemY protein [Escherichia coli H120] gi|323949317|gb|EGB45207.1| hemY protein [Escherichia coli H252] gi|323954006|gb|EGB49804.1| hemY protein [Escherichia coli H263] gi|323959056|gb|EGB54725.1| hemY protein [Escherichia coli H489] gi|323969358|gb|EGB64657.1| hemY protein [Escherichia coli TA007] gi|324014705|gb|EGB83924.1| HemY protein [Escherichia coli MS 60-1] gi|324016229|gb|EGB85448.1| HemY protein [Escherichia coli MS 117-3] gi|324115738|gb|EGC09673.1| hemY protein [Escherichia coli E1167] gi|326344257|gb|EGD68017.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 str. 1125] gi|326347915|gb|EGD71629.1| putative protoheme IX biogenesis protein [Escherichia coli O157:H7 str. 1044] gi|330908101|gb|EGH36620.1| hypothetical protein ECAA86_04133 [Escherichia coli AA86] gi|331036207|gb|EGI08442.1| HemY protein [Escherichia coli H736] gi|331041496|gb|EGI13644.1| HemY protein [Escherichia coli M605] gi|331046805|gb|EGI18889.1| HemY protein [Escherichia coli M718] gi|331052713|gb|EGI24748.1| HemY protein [Escherichia coli TA206] gi|331062118|gb|EGI34040.1| HemY protein [Escherichia coli TA271] gi|331072456|gb|EGI43788.1| HemY protein [Escherichia coli H591] gi|331077220|gb|EGI48434.1| HemY protein [Escherichia coli H299] gi|332089027|gb|EGI94138.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74] gi|332105045|gb|EGJ08391.1| hemY [Shigella sp. D9] gi|332750975|gb|EGJ81380.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70] gi|332751062|gb|EGJ81466.1| tetratricopeptide repeat family protein [Shigella flexneri K-671] gi|332751923|gb|EGJ82318.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71] gi|332764358|gb|EGJ94593.1| tetratricopeptide repeat family protein [Shigella flexneri 2930-71] gi|332996998|gb|EGK16616.1| tetratricopeptide repeat family protein [Shigella flexneri VA-6] gi|332997941|gb|EGK17548.1| tetratricopeptide repeat family protein [Shigella flexneri K-218] gi|332998257|gb|EGK17859.1| tetratricopeptide repeat family protein [Shigella flexneri K-272] gi|333013797|gb|EGK33160.1| tetratricopeptide repeat family protein [Shigella flexneri K-227] gi|333019508|gb|EGK38789.1| tetratricopeptide repeat family protein [Shigella flexneri K-304] Length = 398 Score = 83.8 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|300921489|ref|ZP_07137837.1| HemY protein [Escherichia coli MS 115-1] gi|300411606|gb|EFJ94916.1| HemY protein [Escherichia coli MS 115-1] Length = 398 Score = 83.4 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIVPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|301025755|ref|ZP_07189270.1| HemY protein [Escherichia coli MS 69-1] gi|331675270|ref|ZP_08376021.1| HemY protein [Escherichia coli TA280] gi|300395878|gb|EFJ79416.1| HemY protein [Escherichia coli MS 69-1] gi|331067556|gb|EGI38960.1| HemY protein [Escherichia coli TA280] Length = 398 Score = 83.4 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADDGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|255065154|ref|ZP_05317009.1| HemY family protein [Neisseria sicca ATCC 29256] gi|255050575|gb|EET46039.1| HemY family protein [Neisseria sicca ATCC 29256] Length = 407 Score = 83.4 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 60/410 (14%), Positives = 142/410 (34%), Gaps = 34/410 (8%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++ + + V+ ++ S Y +V I G + R + + L F+ L Sbjct: 1 MKAVVWIVVLFATAVGIVLTSGIYTGNVYIVVGQVMMRVNLHAFILGLVLFVVTLYFLIK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYK---ALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116 ++ PA + R KG + AL + ++ A + + V + Sbjct: 61 FIVGLMNIPARMQRFGTAR---KGRQAAVALNSAGLAFFEGRFEKAEQEAAKVLENKEAG 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175 N L +L A + + L+ + ++P ++ + Y L E + D +A Sbjct: 118 DNRNLALMLGAHAADQMENFELRDHYLKDIEKLPNKQQLSRYLLLAESALGRRDYPTALE 177 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----------NAKEWNRNR 225 A I P+ + ++ + A L + +K A+++ Sbjct: 178 NLNAAARIHPNLSRLARLQLRYAFDHGD---AEDVLAKSEKLMKVGAINDFEAEQYQSWA 234 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L+A + + + +A+++ +LC + A+ +A + + Sbjct: 235 YRRLLAEASDATGLKTCLKRIPEALKADELC-------VAIAEKYERLGLYTEAVKWVRQ 287 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSI 341 + N PE+ + + ++A+ L + + L+ + ++A Sbjct: 288 YYPQNRRPELLEAFVESVRFFNERGQQKAIDLADSWLKDKPDDAPLLMYLGQLAYGRSLW 347 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +A + ++ + P L+LA++ + K + L A+ D Sbjct: 348 GKAQSYLEASIALQPSIAARLMLARVLD-ETGQPQKAQEQRKLVLEAVSD 396 >gi|270264248|ref|ZP_06192515.1| hypothetical protein SOD_g01850 [Serratia odorifera 4Rx13] gi|270041897|gb|EFA14994.1| hypothetical protein SOD_g01850 [Serratia odorifera 4Rx13] Length = 397 Score = 83.4 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 109/364 (29%), Gaps = 7/364 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ + + + + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMAVLLFVVLLAIEWILRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RSRARKQTKAALIKLAEGDYKQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDDFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE + T + V + G+ ++A+ + L+ +P P V Q Y+ Sbjct: 139 QYLERAAEAADTDQLPVDITRVRIQLAQGENHAARHGVDRLLNQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++ + L E + I + + + Sbjct: 199 RTGAFASLLEILPSMGKINLHTEAELQALQQQAYIGLMNQAMADEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + + I + LI N A+ I+ K + + L S N K Sbjct: 259 TRHEVPLQIAMVEHLIECNDHEMAQEIVLDSLKRQYDERLVLLIPRLKSGNPEQLEKALR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ ++ G QA A+K P + LA + + Sbjct: 319 QQVKQHGATPLLNSTLGQLLMKHGEWQQAADAFREALKQRPDAYDYAWLADVLDKLHRSD 378 Query: 376 DKIL 379 + Sbjct: 379 EAAQ 382 >gi|218697516|ref|YP_002405183.1| putative protoheme IX biogenesis protein [Escherichia coli 55989] gi|218354248|emb|CAV00918.1| putative protoheme IX synthesis protein [Escherichia coli 55989] Length = 398 Score = 83.4 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|218707436|ref|YP_002414955.1| putative protoheme IX biogenesis protein [Escherichia coli UMN026] gi|293407429|ref|ZP_06651349.1| protoheme IX biogenesis protein [Escherichia coli FVEC1412] gi|298383169|ref|ZP_06992763.1| protoheme IX biogenesis protein [Escherichia coli FVEC1302] gi|300900650|ref|ZP_07118808.1| HemY protein [Escherichia coli MS 198-1] gi|218434533|emb|CAR15459.1| putative protoheme IX synthesis protein [Escherichia coli UMN026] gi|291425540|gb|EFE98578.1| protoheme IX biogenesis protein [Escherichia coli FVEC1412] gi|298276405|gb|EFI17924.1| protoheme IX biogenesis protein [Escherichia coli FVEC1302] gi|300355866|gb|EFJ71736.1| HemY protein [Escherichia coli MS 198-1] Length = 398 Score = 83.4 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L ++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLKVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|218701287|ref|YP_002408916.1| putative protoheme IX biogenesis protein [Escherichia coli IAI39] gi|218371273|emb|CAR19107.1| putative protoheme IX synthesis protein [Escherichia coli IAI39] Length = 398 Score = 83.4 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAYVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|90023304|ref|YP_529131.1| metal dependent phosphohydrolase [Saccharophagus degradans 2-40] gi|89952904|gb|ABD82919.1| metal dependent phosphohydrolase [Saccharophagus degradans 2-40] Length = 403 Score = 83.4 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 60/405 (14%), Positives = 127/405 (31%), Gaps = 65/405 (16%) Query: 1 MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+R + Y ++ + S + + + I++G+ + ++ F +LL+ Sbjct: 1 MMRALIYCLILLCLGASLTYLVQHDTGYILISYGDTSVEMRFWF---GVFTFSIGLLLLW 57 Query: 60 AVSRFFLSCPAML---FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 + + + GL++ N A+K ++ Sbjct: 58 WCFGLIRRGLTAFGVSRSWWSESKQKRAERHTQRGLINFVEGNWRAAKKDLVGAAK---L 114 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSA 173 ++ LV+ L A E + + TR L ++ + DL A Sbjct: 115 SDKPLVHYLAA-----------ARSAYE-LGEKEETRF-----LIQQAEKHAPENDLAVA 157 Query: 174 QRYAT----------------KALDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQ 213 A +A + P V++ ++W+ + L Sbjct: 158 ISQARILLMEKQLEQCLAVLTRARANHGEHP----VVLELLCRTTIQLRDWTSLVELLPL 213 Query: 214 KKKNA---KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---- 266 K E + L++ H I L ++ + A Sbjct: 214 LAKYKVYDAEELAQLKLNAYLSRLQHLAATAKKEGDHVLIRDLHAFWDAAPKELKANEKL 273 Query: 267 ----AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 A LI +AE IL K + HPE+ N+Y + + +L A + + Sbjct: 274 LFCYAHELIKAKLYDEAESILRVKLKKSWHPELVNLYGRSRTVKSKDQLTHAESWLKTHP 333 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 E + + +IA+ +A ++K+ + + LA++ Sbjct: 334 EDAVLHLALGRIAIRNKLWGKARGYLEQSIKLRETPQAYAELAEV 378 >gi|88813068|ref|ZP_01128310.1| hemY protein [Nitrococcus mobilis Nb-231] gi|88789701|gb|EAR20826.1| hemY protein [Nitrococcus mobilis Nb-231] Length = 420 Score = 83.1 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 68/391 (17%), Positives = 123/391 (31%), Gaps = 9/391 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL FV+ + + + Y T G + S FV FA L++ Sbjct: 1 MKRLFLILFVLLFSVVAALWFDEYKGYALFTAGPWTVQMSLFVFAGGFLALWFALNALWS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R PA + R K K L GLM +A + K + + Sbjct: 61 LLRQLWFMPAGVRLWAGNRRRVKARKKLVGGLMLLAEGRNEESEK--AVLQGADVVDLPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK- 179 L YL+ A + ++ ++ + I R +L ++ Q A Sbjct: 119 LSYLVAAFAAQRQGAWDS-RDQYLELAAIGDKRAQIGLALLQAQLQMQARQWVQAMAKLD 177 Query: 180 -ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSLEN 236 + +P+ + + ++W R L +KN A++ + Sbjct: 178 WVRERAPNNHHALRLLAESAEARQDWERLAKLLPDLRKNGVLAAAELEDVETRTAQARLH 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 L + + A+SLI + +AE +L + + P + Sbjct: 238 VAVEQGSEQIEAVWRGLTRDQKRLPGVVALYAQSLIRVGQSEQAEHLLRGGLEKDWDPRL 297 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 N+Y L + R + E + L AL + A + A + Sbjct: 298 VNVYAELDLNPATRTSEVLERWLKDRPEDPDLLFAAGCQALRSEQLGSARSYLEAASRQV 357 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 R I LL + + ++K + AL Sbjct: 358 ERPMILCLLGDVYER-LGESNKARDSYRRAL 387 >gi|260596026|ref|YP_003208597.1| putative protoheme IX biogenesis protein [Cronobacter turicensis z3032] gi|260215203|emb|CBA27051.1| Protein hemY [Cronobacter turicensis z3032] Length = 387 Score = 83.1 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I TS + + L + + R A R Sbjct: 10 VAGHQGYVLIQTDTWNIETSVTGLAIMAILSLVVLFAIEWLLRRLFHTGARTRGWFAGRK 69 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 70 RSRARKQTKLALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 127 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ + L+I+P P V Sbjct: 128 QHLERAAELADNDQIPVEITRV-------RLQLARNENHAARHGVDRLLEITPRHPEVLR 180 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIA--RSLENADKGDMIASYHDA 249 Q Y+ WS + + +K + A+ A ++ A Sbjct: 181 LAEQAYIRTGAWSSLLDIIPSMQKAGVGDDEHRDALTRQAWIGLMDQARADQGSDGLKTW 240 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + A A A+ LI + + A+ I+ K + + L + N Sbjct: 241 WRNQSRKTRHQPALQVAMAEHLIECDDHQTAQEIILDGLKRQYDDRLVLLMPRLKAGNPE 300 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + ++ + G +A A+K P + LA + Sbjct: 301 QLEKALRQQIKTYGDRPLLWSTLGQLLMSHGEWKEASLAFRAALKQRPDAFDYAWLADVL 360 Query: 369 QANSHNTDKI 378 + Sbjct: 361 DRLHQPEEAA 370 >gi|290477120|ref|YP_003470033.1| protoheme IX synthesis protein [Xenorhabdus bovienii SS-2004] gi|289176466|emb|CBJ83275.1| protein in late step of protoheme IX synthesis with TPR-like domain [Xenorhabdus bovienii SS-2004] Length = 401 Score = 83.1 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 121/392 (30%), Gaps = 22/392 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML+++ F ++ + + ++S + V I N TS ++ + F IL+ Sbjct: 1 MLKVLLLFIILIVGVVLGPVLSGHQGYVLIQTDNHNITTSVTAMVIMFVLLQFLLILIGW 60 Query: 61 VSRFFLSCPAMLFHM-LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 R + L+ +A + + H + Sbjct: 61 CYRRLKRTSTFTHSWLFGGYKRSRARLQTKQALLKLAEGDFK--QVEHLMTRNADHAESP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLN 171 + YLL + A Y+ + +E + + TR G+++ Sbjct: 119 VVNYLLAAEAAQQRGDYHRTIQYIERAAEVADKDQLPVDITRV-------RIQLAQGEVH 171 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAI 227 +A+ K L+ +P P V Q Y + + I L K + ++ R Sbjct: 172 AARNGVDKLLNHAPRHPEVLRLAEQAYTQSGAYQSLIDILPSLIKVGLCDEEHIHQLRQQ 231 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 I + + + + N I+ + A+ LI N A+ I+ Sbjct: 232 AYIGLMNQIMAEKGSTGLKAWWKDQNRKLRNDIVLQVAMAEHLIECNDHDTAQQIVLNGL 291 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 K + + HL ++ T K L + + + + ++AL +A Sbjct: 292 KQQYDERLLLLIPHLKADETEALQKSLAYLLKRHGATPLLNSTLGQVALHHSQWAEAETA 351 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+ P + LA + Sbjct: 352 FKAALVQRPDAHDYAWLADALDKQHKREEAAQ 383 >gi|324111025|gb|EGC05012.1| hemY protein [Escherichia fergusonii B253] gi|325499230|gb|EGC97089.1| protoheme IX biogenesis protein [Escherichia fergusonii ECD227] Length = 398 Score = 82.7 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADDGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRQQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|153835504|ref|ZP_01988171.1| HemY protein [Vibrio harveyi HY01] gi|148867930|gb|EDL67140.1| HemY protein [Vibrio harveyi HY01] Length = 393 Score = 82.7 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 58/383 (15%), Positives = 124/383 (32%), Gaps = 20/383 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N+ S ++ + L A L Sbjct: 1 MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIAALAALFFLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + + + ++ R + + G++ + + A K + + H Sbjct: 61 VVKKVVYASSSTWNYFSVRKMRRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + ++ + AV + R + SA Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRDNEFESAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 AL + +++ Y+ K W I + Q K +A ++ Sbjct: 176 Q-ALKGQYANNSIVLNLLKTTYMQLKLWQPLIDLMPQLSKAKLVTEEEQAEMIQKAQCGL 234 Query: 237 ADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + I +K + I C A LIS+ +A ++++ K Sbjct: 235 LHEVAQQQGSEGLISHWNGLPRKVKQDAHLI---GCFAHELISRKADNEAFTVIKEALKK 291 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +P PE+ + L ++ + + + E+ + ++ +A Sbjct: 292 SPTPELYQLLPELNLPDSHPVIVFLEGVLKREPENAAAQSALAHFFFRQEKWQEAQEHFE 351 Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372 +A+K+ + LA + + Sbjct: 352 VALKLRSDVSDYAYLADTLEKQN 374 >gi|320198492|gb|EFW73093.1| putative protoheme IX biogenesis protein [Escherichia coli EC4100B] Length = 398 Score = 82.7 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V + N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLLQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|163803634|ref|ZP_02197499.1| HemY protein [Vibrio sp. AND4] gi|159172582|gb|EDP57442.1| HemY protein [Vibrio sp. AND4] Length = 393 Score = 82.7 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 117/376 (31%), Gaps = 18/376 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N+ S ++ ++ L A LL Sbjct: 1 MVRLIFLFVVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTLVLLVIAVLTALFLLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V + + + ++ R + G++ + + A K + + H Sbjct: 61 VIKKVVYASSSTWNYFSVRKMRHSRRFTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + ++ + AV + R + +A Sbjct: 119 LCYLVASEAAQGQGDKAK-RDQYLELASQQENAHLAVELTR--AKQFIRENEFEAAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 V + Y+ K W + + Q K +A L+ Sbjct: 176 QTLKSQYTSNAIVLNLLKTTYIQLKLWQPLLDLMPQLSKAKLVTEEEQAELIQKSQFGLL 235 Query: 238 DKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + I ++ + I C A LIS+ +A ++++ K N Sbjct: 236 HEVAQQQGSEGLISHWNSLPRKVRQDSHLI---GCFAHELISRKADAEAFTVIKEALKKN 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P PE+ + L + + + ++ + ++ +A + Sbjct: 293 PSPELYRLLPELNLADIHPVVIFLEGTLKREPDNAAAQSALAHFYFRQERWQEAQQHFEI 352 Query: 351 AMKIAPRKEIFLLLAQ 366 A+K+ + LA Sbjct: 353 ALKLRSDVSDYAFLAD 368 >gi|261378809|ref|ZP_05983382.1| HemY family protein [Neisseria cinerea ATCC 14685] gi|269144789|gb|EEZ71207.1| HemY family protein [Neisseria cinerea ATCC 14685] Length = 405 Score = 82.7 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 26/396 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVILFAAAVGLALASGIYTGDVFIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K L ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFSLARKGRKAALYLNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D + + Sbjct: 121 TLALMLGAHAAGQMGNTELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYETVEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + ++ + A+ L + +K +K A L E Sbjct: 181 AAAKMNAGLTRLVRLQLRYAFERGD---ALEVLAKTEKLSK------AGALGESETEQYQ 231 Query: 239 KGDMIASYHDAIES--LKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEKIWKV 289 DA ++ LK+C I S+ A+ +A +++ + Sbjct: 232 NWAYRRLLADADDAVSLKVCLKRIPDSLKNGELSVSVAEKYERLGLYAEAVRWVKQHYPQ 291 Query: 290 NPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + PE+ + L + + A ++ L+ + ++A +A Sbjct: 292 SRRPELLEAFVESVRFLGERDQQKAIDLADAWLRDQPDNALLLMYLGQLAYGRKLWGKAK 351 Query: 346 AKAMLAMKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 ++ + P L+LA++ E + + Sbjct: 352 GYLEASIALKPSISARLVLAKVFDEIGETQKAEAQR 387 >gi|82779020|ref|YP_405369.1| putative protoheme IX biogenesis protein [Shigella dysenteriae Sd197] gi|309784518|ref|ZP_07679156.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] gi|81243168|gb|ABB63878.1| a late step of protoheme IX synthesis [Shigella dysenteriae Sd197] gi|308927624|gb|EFP73093.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] Length = 398 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPLHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|332084684|gb|EGI89872.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82] Length = 398 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L ++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLVVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|324007479|gb|EGB76698.1| HemY protein [Escherichia coli MS 57-2] Length = 398 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGCEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|323974383|gb|EGB69511.1| hemY protein [Escherichia coli TW10509] Length = 398 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|283787521|ref|YP_003367386.1| Porphyrin biosynthetic protein [Citrobacter rodentium ICC168] gi|282950975|emb|CBG90652.1| Porphyrin biosynthetic protein [Citrobacter rodentium ICC168] Length = 399 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS ++ IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDTYNIETSVTGLVIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ + L+++P P V Sbjct: 140 QHLERAAELADNDTIPVEITRV-------RLQLARNENHAARHGIDRLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +R L + D+ Sbjct: 193 LAEQAYIRTGAWSSLLDIIPSMAKANVGDEEHRDALEQQAWIGLMDQARADRGNEGLREW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLLLPIPRLKTNNPQ 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKSVGDRPLLWSTLGQSLMKHGEWQEATIAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|238760187|ref|ZP_04621334.1| hypothetical protein yaldo0001_1030 [Yersinia aldovae ATCC 35236] gi|238701623|gb|EEP94193.1| hypothetical protein yaldo0001_1030 [Yersinia aldovae ATCC 35236] Length = 399 Score = 82.3 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 116/365 (31%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + + I N TS ++ +L FL ++++ + R R Sbjct: 21 LAGHQGYMLIQTDNYNVETSVTGLVIMLVLFLVTFLIIEWILRRIFRTGTRTRGWFMGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RSRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Y+ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAELAYL 198 Query: 200 LAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + +S + L + A+E I + + + + Sbjct: 199 RSGAYSSLLEVLPAMGKVQLHTAEELAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L S N K Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDSLKRQYDERLILLIPRLKSGNPEPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QHIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADACDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|296162269|ref|ZP_06845064.1| HemY domain protein [Burkholderia sp. Ch1-1] gi|295887536|gb|EFG67359.1| HemY domain protein [Burkholderia sp. Ch1-1] Length = 396 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 51/410 (12%), Positives = 123/410 (30%), Gaps = 46/410 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ ++ +V V + + S + + L L Sbjct: 3 IRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + R P + + K + AL + ++ A A K Sbjct: 63 IFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122 Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 H H QI A + A ++ R Sbjct: 123 GLIAATAAHRMHEYARRDEWLAQINEA--DWQDAR-----LMATADMRADGR-------- 167 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221 D + A T+ + ++ K W + + ++ + Sbjct: 168 ---DADGALTALTEMQSQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280 R R I + D + +++ + + + AA+ L++ N+ ++A Sbjct: 225 VRLRQIAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADLAAELLVALNRPQEAR 281 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 I+E+ N + Y + + +++A ++ E + + + ++ L Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQKDRPEDADLMFALGRLCLHQQL 341 Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K+A + LA++ + ++ +SAL Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTEKASQHYRESAL 391 >gi|323964046|gb|EGB59536.1| hemY protein [Escherichia coli M863] gi|327250651|gb|EGE62357.1| tetratricopeptide repeat family protein [Escherichia coli STEC_7v] Length = 398 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDTYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFIGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|320197611|gb|EFW72223.1| putative protoheme IX biogenesis protein [Escherichia coli WV_060327] Length = 398 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 LLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|260767545|ref|ZP_05876481.1| HemY-like protein [Vibrio furnissii CIP 102972] gi|260617445|gb|EEX42628.1| HemY-like protein [Vibrio furnissii CIP 102972] Length = 393 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 51/379 (13%), Positives = 114/379 (30%), Gaps = 12/379 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F V+ L + + + V I+ + S ++ + L L Sbjct: 1 MVRVLFLFVVLGLGLFAGTQYAGQQGYVLISVASHTIEMSVTTLVIFIIGALAGLFALEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + ++ + + A K + + H Sbjct: 61 LLKKLMYASSNTWNWFSVRKLRRSRRYTNEAIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A ++ + AV + G+L +A Sbjct: 119 LCYLVASEAANGMGDRAK-RDRYLALAAQQENATLAVELTR--AKQQLSDGELQAALSTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + P+ V + Q Y K+W + L + K + L + Sbjct: 176 SALQADHPNNTIVLNLLKQTYTQLKQWQPLLDLLPKLVKAKRMTQDEADQLALVAHQGVM 235 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHP 293 D I + A +LI Q RKA+ ++++ K P P Sbjct: 236 DTIASQKGSEGLIAHWNSLPRKLKAESQLELNLIRQLIVRKADYEAFTLIKESLKKRPSP 295 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + L + + + + E+ + ++ L A A+ Sbjct: 296 ALYALLPELNISDRHPAIVLLKDALNRDGNNAEAHSALGQLYLREQQWADAQQHLEKALS 355 Query: 354 IAPRKEIFLLLAQIEQANS 372 + + LA + Sbjct: 356 LRSSVSDYAYLADALEKQH 374 >gi|91782422|ref|YP_557628.1| hypothetical protein Bxe_A3409 [Burkholderia xenovorans LB400] gi|91686376|gb|ABE29576.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 396 Score = 81.9 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 51/410 (12%), Positives = 123/410 (30%), Gaps = 46/410 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ ++ +V V + + S + + L L Sbjct: 3 IRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDMSLNLFVVGLVVLFILLYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + R P + + K + AL + ++ A A K Sbjct: 63 IFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122 Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 H H QI A + A ++ R Sbjct: 123 GLIAATAAHRMHEYARRDEWLAQIKEA--DWQDAR-----LMATADMRADGR-------- 167 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221 D + A T+ + ++ K W + + ++ + Sbjct: 168 ---DADGALAALTEMQSQGARRIHAQQITLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280 R R I + D + +++ + + + AA+ L++ N+ ++A Sbjct: 225 VRLRQIAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADLAAELLVALNRPQEAR 281 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 I+E+ N + Y + + +++A ++ E + + + ++ L Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQKDRPEDADLMFALGRLCLHQQL 341 Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K+A + LA++ + ++ +SAL Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTEKASQHYRESAL 391 >gi|153949571|ref|YP_001399192.1| protoheme IX biogenesis protein [Yersinia pseudotuberculosis IP 31758] gi|152961066|gb|ABS48527.1| hemY protein [Yersinia pseudotuberculosis IP 31758] Length = 406 Score = 81.5 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 113/365 (30%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + +L L A+ ++ V R A R Sbjct: 21 LAGHQGYVLIQTDNYNVTTSVTGLAIMLVLLLVAFFIVEWVLRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARNQMKAALIKLAEGDFLQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADGDQLPVNITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESLKL 255 + + + L K A L + ++ + + Sbjct: 199 RSGAYRSLLDVLPAMGKTQIHTPEEVAALEQQAYIGIMNQCMADEGSEGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L + N K Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQKIILDSLKHQYDERLVLLIPRLKAGNPEPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|51594537|ref|YP_068728.1| protoheme IX biogenesis protein [Yersinia pseudotuberculosis IP 32953] gi|170026230|ref|YP_001722735.1| putative protoheme IX biogenesis protein [Yersinia pseudotuberculosis YPIII] gi|186893535|ref|YP_001870647.1| putative protoheme IX biogenesis protein [Yersinia pseudotuberculosis PB1/+] gi|51587819|emb|CAH19421.1| putative protoheme IX biogenesis protein [Yersinia pseudotuberculosis IP 32953] gi|169752764|gb|ACA70282.1| HemY protein [Yersinia pseudotuberculosis YPIII] gi|186696561|gb|ACC87190.1| HemY protein [Yersinia pseudotuberculosis PB1/+] Length = 406 Score = 81.5 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 113/365 (30%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + +L L A+ ++ V R A R Sbjct: 21 LAGHQGYVLIQTDNYNVTTSVTGLAIMLVLLLVAFFIVEWVLRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARNQMKAALIKLAEGDFLQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADGDQLPVNITRVRIQLAQGHIHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHDAIESLKL 255 + + + L K A L + ++ + + Sbjct: 199 RSGAYRSLLDILPAMSKTQIHTPEEVAALEQQAYIGIMNQCMADEGSEGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L + N K Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQKIILDSLKHQYDERLVLLIPRLKAGNPEPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|170769818|ref|ZP_02904271.1| HemY protein [Escherichia albertii TW07627] gi|170121256|gb|EDS90187.1| HemY protein [Escherichia albertii TW07627] Length = 398 Score = 81.5 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + I + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIIFILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEVRAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD----MIASYHD 248 Q Y+ WS + + K +RA L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAALEQQAWIGLMDQARANDGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASIAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 D Sbjct: 372 DRLHKPEDAA 381 >gi|261823399|ref|YP_003261505.1| protoheme IX biogenesis protein [Pectobacterium wasabiae WPP163] gi|261607412|gb|ACX89898.1| HemY protein [Pectobacterium wasabiae WPP163] Length = 397 Score = 81.5 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 118/365 (32%), Gaps = 9/365 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I + +TS ++ +L F A++ + + R + R Sbjct: 21 VAGHQGYVLIQTDDYDIQTSVTALVIMLVLFFLAFLAVEWLLRRIFRTGSRTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A Sbjct: 81 RSRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + + ++A+ K L+++P P V Q ++ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254 A +S + L +K + R + L ++ + G + Sbjct: 199 RAHAYSALLDILPVMRKINL-YPEARLLDLQQQAYIGLMNQAMADGGSEGLKSWWNNQSR 257 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I I A+ LI + A+ I+ K + + L + N K Sbjct: 258 KVRHEIPLQIAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKML 317 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + + + ++ ++ G QA A++ P + A + Sbjct: 318 YQYIKQQGATPLLNSTLGQLLMKHGEWQQASDAFRNALEQRPDAYDYAWRADALERLHLP 377 Query: 375 TDKIL 379 + Sbjct: 378 DEAAQ 382 >gi|311693128|gb|ADP96001.1| HemY domain protein [marine bacterium HP15] Length = 413 Score = 81.5 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 135/384 (35%), Gaps = 47/384 (12%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 + I+ G+ L T+ +V L ++ + +L + R + ++ + + N + Sbjct: 27 GYIRISLGHYLIETNFWVGLGLIVALIVLTVLTINLIRRLRTSTGLVAGWIARGNERRAR 86 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQY----NIAH 140 + GL+++A N P ARK+ + + + L+ L Q + + ++ Sbjct: 87 RRTTQGLLALAEGNWPRARKLLTSSASHA---DTPLINYLAAAQASFETGDHEAVDDLLR 143 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALD-------ISPDAPW 189 + + +G + + A +AL SP P+ Sbjct: 144 KAFDSTPGSD--------------MAVGITQAQLQLAGNRLEQALATLVRLRKQSPHHPF 189 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLE---NADK 239 V + + Y+ ++W L + +K + + R L+ R+ E K Sbjct: 190 VLKLLKNTYLRLEDWRELSRLLPELRKRSVLSEAELNDLERQVWHNLLERAAEDCRRQQK 249 Query: 240 GDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 D AS + A+ L S + + E +L K+ + + E+ Sbjct: 250 QDPEASLEPLTRLWDELPGFLRRDEYTIRDYARLLASLGDEVQTETLLRKVLRNHWSDEL 309 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 N+Y + + +L A + + + E L+ + +++L +A ++++ Sbjct: 310 INLYGRVKGQKPDEQLLLAEQWLKDRPNNPELLLALGRLSLRNELWGKAREYFETSLRLK 369 Query: 356 PRKEIFLLLAQIEQANSHNTDKIL 379 +E L+++ + Sbjct: 370 RSREALAELSRLNAHMGEEEASVK 393 >gi|50123111|ref|YP_052278.1| putative protoheme IX biogenesis protein [Pectobacterium atrosepticum SCRI1043] gi|49613637|emb|CAG77088.1| porphyrin biosynthetic protein [Pectobacterium atrosepticum SCRI1043] Length = 397 Score = 81.5 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 119/365 (32%), Gaps = 9/365 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I N +TS ++ +L F A++ + V R L + R Sbjct: 21 VAGHQGYVLIQTDNYDIQTSVTGLVIMLVLFFLAFLAVEWVLRRILRTGSRTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A Sbjct: 81 RSRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + + ++++ K L+++P P V Q ++ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLARNEDHASRHGVDKLLEVAPRHPEVLRLAEQAFL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254 + + L +K + R + L R+ + G + Sbjct: 199 RTHAYGALLDILPAMRKINL-YPEARLLDLQQRAYIGLMNQAMADGGSEGLKSWWNNQSR 257 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I I A+ LI + A+ I+ K + + L + N K Sbjct: 258 KVRHEIPLQIAMAEHLIECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKML 317 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + + + + ++ ++ G QA A+++ P + A + Sbjct: 318 HQYIKQHGATPLLSSTLGQLLMKHGEWQQASDAFRTALELRPDAYDYAWRADALERLHLP 377 Query: 375 TDKIL 379 + Sbjct: 378 DEAAQ 382 >gi|215489128|ref|YP_002331559.1| putative protoheme IX biogenesis protein [Escherichia coli O127:H6 str. E2348/69] gi|312969472|ref|ZP_07783674.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75] gi|215267200|emb|CAS11648.1| predicted protoheme IX synthesis protein [Escherichia coli O127:H6 str. E2348/69] gi|312286019|gb|EFR13937.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75] Length = 398 Score = 81.1 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 110/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPKVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHKPEEAA 381 >gi|293413243|ref|ZP_06655905.1| hemY protein [Escherichia coli B354] gi|291468191|gb|EFF10688.1| hemY protein [Escherichia coli B354] Length = 379 Score = 81.1 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 2 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 61 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 62 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 119 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 120 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 172 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ + Sbjct: 173 LAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNW 232 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ + K + L + N Sbjct: 233 WKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQFIIDGLKRQYDDRLLLPIPRLKTNNPE 292 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 293 QLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADAL 352 Query: 369 QANSHNTDKI 378 + Sbjct: 353 DRLHKPEEAA 362 >gi|315178737|gb|ADT85651.1| hypothetical protein vfu_A00430 [Vibrio furnissii NCTC 11218] Length = 393 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 51/379 (13%), Positives = 115/379 (30%), Gaps = 12/379 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F V+ L + + + V I+ + S ++ + L L Sbjct: 1 MVRVLFLFVVLGLGLFAGTQYAGQQGYVLISVASHTIEMSVTTLVIFIIGALAGLFALEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + ++ + + A K + + H Sbjct: 61 LLKKLMYASSNTWNWFSVRKLRRSRRYTNEAIIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A ++ + AV + G+L +A Sbjct: 119 LCYLVASEAANGMGDRAK-RDRYLALAAQQENATLAVELTR--AKQQLSDGELQAALSTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + P+ V + Q Y K+W + L + K + L + Sbjct: 176 SALQADHPNNTIVLNLLKQTYTQLKQWQPLLDLLPKLVKAKRMTQDEADQLALVAHQGVM 235 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHP 293 D I + A +LI Q RKA+ ++++ K P P Sbjct: 236 DTIASQKGSEGLIAHWNSLPRKLKAESQLELNLIRQLIVRKADYEAFTLIKESLKKRPSP 295 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + L + + + + E+ + ++ L A A+ Sbjct: 296 ALYALLPELNISDRHPAIVLLKDALNRDGNNAEAHSALGQLYLREQQWADAQQHLEKALS 355 Query: 354 IAPRKEIFLLLAQIEQANS 372 + + LA + + Sbjct: 356 LRSSVSDYAYLADALEKQN 374 >gi|238789372|ref|ZP_04633158.1| hypothetical protein yfred0001_23020 [Yersinia frederiksenii ATCC 33641] gi|238722515|gb|EEQ14169.1| hypothetical protein yfred0001_23020 [Yersinia frederiksenii ATCC 33641] Length = 399 Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 115/365 (31%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L L A++++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMLILVLVAFLIIEWILRRIFRTGARTRGWFMGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Y+ Sbjct: 139 QYLERAAEVADTEQLPVDITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAELAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN----ADKGDMIASYHDAIESLKL 255 + +S + L K A L + + + + Sbjct: 199 RSGAYSSLLEILPAMGKVQVHTPDEIAALEQQAYIGIMNQCMAEEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L S N K Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDSLKRQYDERLVLLIPRLQSGNPDPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|119503705|ref|ZP_01625787.1| metal dependent phosphohydrolase [marine gamma proteobacterium HTCC2080] gi|119460213|gb|EAW41306.1| metal dependent phosphohydrolase [marine gamma proteobacterium HTCC2080] Length = 407 Score = 80.7 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 60/380 (15%), Positives = 109/380 (28%), Gaps = 20/380 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPED-VSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M LI + ++ + V I+ G+ + TS + L + L Sbjct: 1 MRGLIVLVLMGLVLGAVLVNQVDQGGGYVYISLGDVVVETSAWFALLLWLVIWGLLAFLL 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 R +L + R GL+S N A K + Sbjct: 61 GTIRRVWGTQRVLSGWMGLRKSRNATALTNRGLISFIEGNWERAHK--QLLRSARYSDAP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRY 176 + +L+ + + + A E+L + A AV ++ G+ A Sbjct: 119 LVNHLIAARASFRLGNIDEAKEQLGKAESVEADAGVAVE--LTQAELQLSAGNYEQALAT 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---------TFLNQKKKNAKEWNRNRAI 227 +A + P+V + + + EW L E A+ Sbjct: 177 LVRARANAAKHPYVLALLARAHRHLGEWEALRPLLPELHKYGLLEDVALLGLEGELWDAL 236 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + D+ + D + + +C LI R+AE L Sbjct: 237 IRSTADQPDGSVKDLSGLWRDIPRAQRDQLKL---KVCYVDVLIKLGGHREAEKQLVAWL 293 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 E+A EN L + E L+ +++AL G + A Sbjct: 294 GKERQGELAAFLGRFPPENPRKLLNIIRKWLEAPTHDGVLLLAGARVALHAGEWEVAETW 353 Query: 348 AMLAMKIAPRKEIFLLLAQI 367 A + E LA++ Sbjct: 354 LEEAHQGGATAENCCELARL 373 >gi|149191472|ref|ZP_01869721.1| HemY protein [Vibrio shilonii AK1] gi|148834660|gb|EDL51648.1| HemY protein [Vibrio shilonii AK1] Length = 354 Score = 80.7 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 102/328 (31%), Gaps = 10/328 (3%) Query: 51 FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110 L LL + + L F+ R + + G++ + + LA K + Sbjct: 12 ALAGLFLLEYIIKKVLYTSVTTFNYFSVRKMRRSRRYTNEGIVKLLEGDWKLAEKKVTRW 71 Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIG 168 + H L YL+ + AL + + + + AV L ++ R Sbjct: 72 ANYH--DMPLLCYLVASEAALGQGDKAK-RDHYLALAAKQENSDLAVQ-LTRAKQAVREE 127 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRN 224 + A P+ V Y EW I L K + E N Sbjct: 128 EWEVAASTLETLKAEHPNNSIVLSLQKTTYRELGEWQALIDLLPKLHKAKLIDELEQNEL 187 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + A + + + + S C +K LI++ +A +++ Sbjct: 188 NERAQCGLLEDIASQQGSEGLINHWNKLPRKTRQSTHLVGCFSKQLIARKADAEAFTVIK 247 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + K H ++ + L +T + + + ++ E+ +++ +A Sbjct: 248 ETLKKQGHEDLYKVLPELNLADTHPVVVLLEDVVKKQPDTPEAQSALAQFYFREEKWPEA 307 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANS 372 A+ + P + LA + + Sbjct: 308 QRHFERALSLRPDVSDYAYLADTLEKQN 335 >gi|146280922|ref|YP_001171075.1| HemY protein [Pseudomonas stutzeri A1501] gi|145569127|gb|ABP78233.1| HemY protein [Pseudomonas stutzeri A1501] Length = 406 Score = 80.4 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 135/392 (34%), Gaps = 22/392 (5%) Query: 1 MLR-LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R ++ + ++++ +S V IT+ Y +S +V L+++ + + Sbjct: 1 MRRLVLVFILLLAIAGLLGWAISQSAGYVLITYDRFRYESSFWVFLALIGCLWLLALAVH 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V A++ + + KA GL +A A + + + Sbjct: 61 WVLGLLHVSGALINPWSRRHRERRVEKASRRGLRELAEGQWGPALGHLQLAAAR---DRQ 117 Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRY 176 LV+ L + A +Y + E L+ + A+ L G A+ Sbjct: 118 PLVHYLGAARAANELGEYAQSDELLQKAREREPEAALAI-GLTQAQLQIARGQYVEARAS 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSL 234 + P P+V + Q YV ++W+ L + +K+ + +L + Sbjct: 177 LSALQSDHPRHPYVLTLLQQLYVQLEDWAALCRLLPELRKHRVLPPARLSELEVLAWTAA 236 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASI--------CAAKSLISQNKKRKAEVILEKI 286 + ++E+L ++ ++ A L + KAE +L Sbjct: 237 VEQAGQPSELTAEASLEALNQRWQTVPSAQRGEPLVVRAYADGLARLGAQAKAEEVLYAA 296 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K + Y + + +L A + + ++ L+ + +++L +A Sbjct: 297 IKRQYDDRLVERYGRVQGSDPARQLANAEGWLKDHPQNAVLLLALGRLSLRNALWGKARD 356 Query: 347 KAMLAMKIAPR----KEIFLLLAQIEQANSHN 374 +++ R E+ LLAQ+ + N Sbjct: 357 YLEASLRFDHRPETCAELARLLAQLGDTENSN 388 >gi|209516092|ref|ZP_03264952.1| HemY domain protein [Burkholderia sp. H160] gi|209503552|gb|EEA03548.1| HemY domain protein [Burkholderia sp. H160] Length = 396 Score = 80.0 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 49/410 (11%), Positives = 124/410 (30%), Gaps = 46/410 (11%) Query: 2 LRLIRYFF-VISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + + ++ + + V + + S + + + L Sbjct: 3 IRGLLWLAGLFAVAVVLAVGGHFDTGQVLLIYPPYRVDMSLNLFIVAVVVLFILLYTLLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + R P + + K + AL + ++ A A K Sbjct: 63 IIRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122 Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 H H QI A + A +L R Sbjct: 123 GLIAATAAHRMHEYARRDEWLAQIDEA--DWQDAR-----LLATADMRADGR-------- 167 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221 D + A T+ + +++ K W + + ++ + Sbjct: 168 ---DADGALNALTEMQSQGARRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280 R R + + D + +++ + + + AA+ L++ N+ ++A Sbjct: 225 VRLRQLAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADTAAELLVALNRPQEAR 281 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 I+E+ N + Y ++ + +++A ++ E + + + ++ L Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGDDALPLIQKAEAWQKDRPEDADLMFALGRLCLRQQL 341 Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K+A + LA++ + ++ +SAL Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDTDKASQHYRESAL 391 >gi|298484665|ref|ZP_07002768.1| HemY domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160805|gb|EFI01823.1| HemY domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 414 Score = 80.0 bits (196), Expect = 7e-13, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL V + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ + L Y+ + A + +Y Sbjct: 84 RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD A + P P V + + Y Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A + L A + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGGDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364 +L+ A + + L+ + +I L+ +A ++++ E+ LL Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379 Query: 365 AQIEQANSHNT 375 AQ+ + + NT Sbjct: 380 AQLGETDRSNT 390 >gi|258545715|ref|ZP_05705949.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258519032|gb|EEV87891.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 420 Score = 79.6 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 118/355 (33%), Gaps = 18/355 (5%) Query: 35 RLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMS 94 TS V L + A + + P + R K + L +G+ + Sbjct: 34 YYIETSLIVWLLLSLVASVALYHILKALCWLWHSPQIFSRSSAVRRQHKADRLLKSGMTA 93 Query: 95 IAAHNIPLARKMHSYVSQQH-TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + A + A + + + ++Y IA + + ++ + A Sbjct: 94 LLAGHYSRAERDLDRGGKLAESLGQNAVIYFENAAIAADRQNAKERRDHYLLLARQDARH 153 Query: 154 EFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + E+ + G A + K P +T + + Y ++W++A Sbjct: 154 QHGSLTRLAEAEIHVQNGAYEQAAKLLEKLHQEEPRNSKITALLDETYAKQQDWAKAWAL 213 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---- 266 L + + E R A + +++E+L+ + A + Sbjct: 214 LPALRPHLAEAE------YSTRQKTYAKGLLHDTATRESVEALEAAWKRLPAEVRRDKDM 267 Query: 267 ----AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 A +L+ + +AE +L + E Y+ L N +L+ + E + Sbjct: 268 ILQYAGALVENDHPEEAEKLLAAEIRQTQDLEYIQAYSQLRRANFRAQLEHMKQWENKHT 327 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 L + IA + +D A A A+K + E F L AQI +A + Sbjct: 328 NDAIFLYAKALIAYKAKELDIALAAIEEAVKRSQTGEAFALYAQILEAKNRPEAA 382 >gi|330881674|gb|EGH15823.1| hemY protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 418 Score = 79.6 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL V + ++ + Sbjct: 28 EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 87 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ + L Y+ + A + +Y Sbjct: 88 RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 145 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD A + P P V + + Y Sbjct: 146 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 203 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A + L A + S A Sbjct: 204 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 263 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 264 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 323 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364 +L+ A + + L+ + +I L+ +A ++++ E+ LL Sbjct: 324 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 383 Query: 365 AQIEQANSHNT 375 AQ+ + + NT Sbjct: 384 AQLGETDRSNT 394 >gi|254784453|ref|YP_003071881.1| metal dependent phosphohydrolase [Teredinibacter turnerae T7901] gi|237683868|gb|ACR11132.1| metal dependent phosphohydrolase [Teredinibacter turnerae T7901] Length = 401 Score = 79.6 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 132/381 (34%), Gaps = 24/381 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +L ++ +++ + +I + + I+ G+ TS + + + F + + Sbjct: 6 LLGILTLCAIVAAPLILELIKADT-GYILISLGSTTIETSFWFAIFAVIFGVLVLRWSYM 64 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R L + + L + + GL+ N A+K V++ Sbjct: 65 LLRAILRSLGVSWAFLAEGRSRQLNARTQRGLIHYIEGNWQAAKKDLLSVAK--YADQPL 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYA-- 177 + YL A L ++ E AV L ++ ++ + Q A Sbjct: 123 VHYLAAAHSAHQLGDMETCQALLSKAEEVAPENELAV--LLSQAKMQLANQQCEQCLATL 180 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A ++P P V + ++ Y +W+ A+ L + K +K + + + L ++ Sbjct: 181 ERARSVAPRHPVVLDLLLTVYQRVNDWA-AVQALLPELKKSKAYTQEQLHSLEVDAVCAV 239 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAE----VILEKIWKVN 290 KL + + + + L + AE +L K W Sbjct: 240 LDTHKFNLDELKSYWQKLDKSLKQSQVLVLQYCGHLQRLGAEEAAEQQLRRVLTKQWDAR 299 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM- 349 + +Y + + +L A + + L+ +++IA+ +A + Sbjct: 300 ----LVELYGRVRGGSDNEQLLVAEQWLRERPGDPDLLLALARIAMRNQLWGKARSYFES 355 Query: 350 -LAMKIAP--RKEIFLLLAQI 367 L ++ P E LLAQ+ Sbjct: 356 SLQLQKNPQAYAEFAALLAQL 376 >gi|327479191|gb|AEA82501.1| HemY protein [Pseudomonas stutzeri DSM 4166] Length = 406 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 136/392 (34%), Gaps = 22/392 (5%) Query: 1 MLR-LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R ++ + ++++ +S V IT+ Y +S +V L+++ + + Sbjct: 1 MRRLVLVFILLLAIAGLLGWAISQSAGYVLITYDRFRYESSFWVFLALIGCLWLLALAVH 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V A++ + + KA GL +A A +++ + Sbjct: 61 WVLGLLHVSGALINPWSRRHRERRVEKASRRGLRELAEGQWGPALGHLQLAAER---DRQ 117 Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRY 176 LV+ L + A +Y + E L+ + A+ L G A+ Sbjct: 118 PLVHYLGAARAANELGEYAQSDELLQKAREREPEAALAI-GLTQAQLQIARGQYVEARAS 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSL 234 + P P+V + Q YV ++W+ L + +K+ + +L + Sbjct: 177 LSALQSDHPRHPYVLTLLQQLYVQLEDWAALCRLLPELRKHRVLPPARLSELEVLAWTAA 236 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASI--------CAAKSLISQNKKRKAEVILEKI 286 + ++E+L ++ ++ A L + KAE +L Sbjct: 237 VEQAGQPSELTAEASLEALNQRWQTVPSAQRGEPLVVRAYADGLARLGAQAKAEEVLYAA 296 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K + Y + + +L A + + ++ L+ + +++L +A Sbjct: 297 IKRQYDDRLVERYGRVQGSDPARQLANAEGWLKDHPQNAVLLLALGRLSLRNALWGKARD 356 Query: 347 KAMLAMKIAPR----KEIFLLLAQIEQANSHN 374 +++ R E+ LLAQ+ + N Sbjct: 357 YLEASLRFDHRPETCAELARLLAQLGDTENSN 388 >gi|224826004|ref|ZP_03699107.1| HemY domain protein [Lutiella nitroferrum 2002] gi|224601641|gb|EEG07821.1| HemY domain protein [Lutiella nitroferrum 2002] Length = 402 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 112/370 (30%), Gaps = 17/370 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + +L + + + + S +++ + + L+ Sbjct: 1 MKFVLWITGLFALAVLVGLASTLNTGYAILFLPPYRLEVSFNLLIVAVILLIVVAHLVLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-QHTFHNE 119 + P + ++ AL ++ A + + N+ Sbjct: 61 LIGLATGLPEEVRRFQRQKKLKAARHALREAGIAFFEGRFQRAEREAVRALADESAPENK 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY--FESCRIGDLNSAQRYA 177 L L+ + A A + + L + +P R + D A Sbjct: 121 ALALLMAARSAAAMQDLDKRDGYLSQLDALPE-RLQLARHMLDAELKLDAKDTLGALSAI 179 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAILLIARSL 234 +A ISP+ + ++ +L K+ + + K + R + + L Sbjct: 180 ERARAISPNLTNALKLELKVRLLQKQPEAVLALTEKLLKAEALEPDRARRYRLAAYTQQL 239 Query: 235 ENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW--KVNP 291 + +G I E + + + + LI + A ++ Sbjct: 240 DGFVQGQEIRDWLRRVPEVERNNPTLVSRIV---ERLIVLGEADYAATLIASALGNDDQA 296 Query: 292 HPEIA----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 PE+A + HL +E + LK A ++ L+ + ++AL +A + Sbjct: 297 TPELARELGQLAEHLTAEKRLELLKDAESWLKLRPRDHLLLLALGRLALAQQLWGKAQSY 356 Query: 348 AMLAMKIAPR 357 + I P Sbjct: 357 LEASASIEPT 366 >gi|330890198|gb|EGH22859.1| hemY protein [Pseudomonas syringae pv. mori str. 301020] Length = 414 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL V + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRTRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ + L Y+ + A + +Y Sbjct: 84 RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD A + P P V + + Y Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A + L A + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364 +L+ A + + L+ + +I L+ +A ++++ E+ LL Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379 Query: 365 AQIEQANSHNT 375 AQ+ + + NT Sbjct: 380 AQLGETDRSNT 390 >gi|71733208|ref|YP_272376.1| hemY protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485542|ref|ZP_05639583.1| hemY protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625851|ref|ZP_06458805.1| hemY protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646417|ref|ZP_06477760.1| hemY protein [Pseudomonas syringae pv. aesculi str. 2250] gi|71553761|gb|AAZ32972.1| hemY protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320331305|gb|EFW87248.1| hemY protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330867938|gb|EGH02647.1| hemY protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330985682|gb|EGH83785.1| hemY protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011834|gb|EGH91890.1| hemY protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 414 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 128/371 (34%), Gaps = 22/371 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL V + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ + L Y+ + A + +Y Sbjct: 84 RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD A + P P V + + Y Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A + L A + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364 +L+ A + + L+ + +I L+ +A ++++ E+ LL Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379 Query: 365 AQIEQANSHNT 375 AQ+ + + NT Sbjct: 380 AQLGETDRSNT 390 >gi|114049128|ref|YP_739678.1| HemY domain-containing protein [Shewanella sp. MR-7] gi|113890570|gb|ABI44621.1| HemY domain protein [Shewanella sp. MR-7] Length = 388 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 61/409 (14%), Positives = 141/409 (34%), Gaps = 44/409 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++ + + +I + +C + V I G+ TS + +L F + +L Sbjct: 1 MIKALIFLGIILIGLCISPWIVGNTGYVYIAAGDYQLETSLVFGIIMLIVFYALFQVLEW 60 Query: 61 VSRFFLSCPAMLFHML----HKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVS--QQ 113 + ++ +L +R K + + G ++IA + P A R M + Sbjct: 61 LVITVINL--LLRSRFIPQHWRRRSAKKHTLI--GALAIAEEDWPAAERAMIKGADNGEL 116 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169 + + Q +AER +A + + M TR + D Sbjct: 117 PALNLLAAARAAQHQNKIAERDQYLARAEAQPMTANAVATTRTRYLLKQGELTLARAELD 176 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220 + A + +P ++ Y ++W L+ K NA Sbjct: 177 -----KLAPTSKSKAPVLKLA----LELYCAQEDWEALKLLLPILKKRQILDDAKLNALS 227 Query: 221 WNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A+L A + ++ S + + + A L N+K + Sbjct: 228 VETHCALLKAASLKGEDALEQCWQWLSRDE-----RNQPEFL---AIYAMGLCRFNRKDQ 279 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A +L K + +P + + +++ + K+ L+ E ++ + + ++ + + Sbjct: 280 ALKLLSKKLRSSPESALLEVIPQIVTAHDEEIRKQLLKHEITHENNADYQKCLALLYQQT 339 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + +A ++AP + +L LA+I++ + A++ Sbjct: 340 RDMKEAKTCWQNVCRLAPSQASWLSLARIQE-QLGEQGNANQSYRQAVN 387 >gi|114561624|ref|YP_749137.1| HemY domain-containing protein [Shewanella frigidimarina NCIMB 400] gi|114332917|gb|ABI70299.1| HemY domain protein [Shewanella frigidimarina NCIMB 400] Length = 389 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 73/400 (18%), Positives = 146/400 (36%), Gaps = 29/400 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++ + Y +I + +C ++ + I G TS + L F FA LL Sbjct: 1 MIKTLVYVVLILIGLCISPLIIGQSGYIYIAIGEYQIETSLVTGIVGLIVFYFALQLLEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYT-GLMSIAAHNIPLARK-MHSYVSQQHTFHN 118 + L+ L ++ K K G +++A + P A K M + Sbjct: 61 LIILLLNIVLS-SRYLPEQWRRKAAKKHTLIGALALAEEDWPAAEKAMAKGAEKGEI--- 116 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-----YSLYFESCRIGDLNSA 173 L + A + A + + + AV L + G+L A Sbjct: 117 PVLNLFAAARAAHYQGD-ITARDHYLTQAEKNPIAKTAVYTSRTRYLMKQ----GELVKA 171 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWN----RNR 225 + K S + V + + Y+ ++W L ++ E+N + Sbjct: 172 RAILDKLNPTSKSSSPVLKLAQELYLQQQDWQALKLLLPILKKRQLLAETEFNQLNTKTN 231 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +IL+I + + ++ +H +S + D I+A A+ LI K +A ++ K Sbjct: 232 SILMINAAK--ISEAELTKCWHWLNKSERKEDELILA---YARGLIQYGHKDQALKLINK 286 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 +P + L++ K +LE ++ + + ++K+A++ QA Sbjct: 287 QLNASPSAALFTAIPDLITAQDQDIRKLLSKLETTHENDADYQMCLAKLAIQSRETKQAK 346 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +IAP + +L LAQ ++ N+ + +A Sbjct: 347 THWQNVCRIAPTHQSWLALAQTQEQLGENSTAAHSYRNAA 386 >gi|320326721|gb|EFW82766.1| hemY protein [Pseudomonas syringae pv. glycinea str. B076] Length = 414 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 129/371 (34%), Gaps = 22/371 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL V + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVAVLLVIALLRLVITLLTTSGRVVNPWSRRNRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ + L Y+ + A + +Y Sbjct: 84 RVQLAIEHGQMDLAEGRWASAQRHLQRAAEADA--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD A + P P V + + Y Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRA----------ILLIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A + L A + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLTLAAYRDGIEGSPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A++Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLAHLYGLVRGSDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLL 364 +L+ A + + L+ + +I L+ +A ++++ E+ LL Sbjct: 320 KQLQMAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARLL 379 Query: 365 AQIEQANSHNT 375 AQ+ + + NT Sbjct: 380 AQLGETDRSNT 390 >gi|261250038|ref|ZP_05942615.1| HemY-like protein [Vibrio orientalis CIP 102891] gi|260939542|gb|EEX95527.1| HemY-like protein [Vibrio orientalis CIP 102891] Length = 395 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 56/401 (13%), Positives = 131/401 (32%), Gaps = 15/401 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RLI F V+ L + + S V I+ ++ S ++ + L L Sbjct: 1 MFRLIFLFVVLGLGLFAGTQFSGQQGYVLISVASKTIEMSVTTLVIFVIAALAGLFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + ++ R + + G++ + + +A K + + H Sbjct: 61 LVKKAFYASSATWNYFSVRKMRRSRRYTNEGIIKLLEGDFKVAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A ++ + AV + R D ++A Sbjct: 119 LCYLVASEAAQGMGNNEQ-RDRYLELAAKQDNSTLAVELTR--AKQLIREADYSAAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + P+ V + Q Y+ K W + L + K+ + L R+ Sbjct: 176 SSLKSSYPNNTIVLNLLKQVYIELKLWQPLLDLLPKLVKHKIILKEEQEPL-TQRAQCGL 234 Query: 238 DKGDMIASYHDAIESLKLC-DNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNPH 292 + + + + A AK LIS+ +A +L++ K +P+ Sbjct: 235 LHEVAAQKGSEGLIAHWNSLPRKVKADTHLIECFAKQLISRQADSEAFTLLKETLKKHPN 294 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++ + L ++ + + + + + + +++ L A A+ Sbjct: 295 SDLYALLPKLKLTDSHPAVVFLEGVLQKDGNNAGAHSALAQFYLREEKWSDAQGHFEKAL 354 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 + + L+ + + T ++ AL + +P Sbjct: 355 SVRSSVSDYGYLSDALEKQNL-TKAAHEVSKKALTLINEPA 394 >gi|170691939|ref|ZP_02883103.1| HemY domain protein [Burkholderia graminis C4D1M] gi|170143223|gb|EDT11387.1| HemY domain protein [Burkholderia graminis C4D1M] Length = 396 Score = 79.2 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 47/402 (11%), Positives = 118/402 (29%), Gaps = 47/402 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + +V V + + S + + L L Sbjct: 3 IRGLLWLALLFTIAVVLAVVGRFDMGQVLLVYPPYRIDMSLNLFVVGLVVLFILLYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + R P + + K + AL + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122 Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 H H QI A + A ++ R Sbjct: 123 GLIAAAAAHRMHEYARRDEWLAQIDEA--DWQDAR-----LMATADMRADGR-------- 167 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221 D + A + + +++ K W + + ++ + Sbjct: 168 ---DADGALAALKEMQSQGGRRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280 R R + + D + +++ + + AA+ L++ N+ ++A Sbjct: 225 VRLRQLAAENLLRDRRHNADALLELWNSLTPTERHSPRL---ADLAAELLVALNRPQEAR 281 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 I+E+ N + Y + + +++A ++ + + L + ++ L Sbjct: 282 KIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEGWQKDRPDDADLLFALGRLCLHQQL 341 Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKI 378 +A + A+K+A + LA++ + + +K Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHE-QLGDAEKA 382 >gi|298368862|ref|ZP_06980180.1| HemY family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282865|gb|EFI24352.1| HemY family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 406 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 52/382 (13%), Positives = 117/382 (30%), Gaps = 24/382 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + ++ + + Y +V + G + R + + L + L Sbjct: 1 MRSVVWIVILFAVAVGLALASGVYTGNVYVVAGQTMLRMNLHAFVLGLIIAVVILYFLVR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + L+ P + R + AL + A + V N Sbjct: 61 LIAGLLNIPGRMQRFGTARKGRQAATALNNAGQAFFEGKFEQAENEAAKVLANKEAGGNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L+ + +P ++ + Y L E + D +A++ Sbjct: 121 ALALMLGAHAADQMDNIELRDRYLKDIEALPKKQQLSRYLLLAESALTNRDYPAAKQNLD 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A I+P+ +Q + A L + +K +A + E Sbjct: 181 AAAQINPNL--TRLVRLQLRYAFDD-GNAAEVLEKSEK------LEKAGAISDYEAEQYQ 231 Query: 239 KGDMIASYHDAIES--LKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILEKIWKV 289 A ++ LK C I + + A+ +A +++ + Sbjct: 232 SWAYRRLLASAADADGLKSCLKRIPENLKSGGLCVEIAEKYERLGLYGQAVKWVDRYYPQ 291 Query: 290 NPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 E+ + L + A + ++ + L+ + ++A +A Sbjct: 292 TQQIELLEPFVDSVRYLSDREQQQAIDTADSWLQTRPDNAKLLMYLGQLAYGKRLWGKAQ 351 Query: 346 AKAMLAMKIAPRKEIFLLLAQI 367 ++ I P L LA++ Sbjct: 352 GYLEASIAIKPTVSARLALAKV 373 >gi|187923072|ref|YP_001894714.1| HemY domain protein [Burkholderia phytofirmans PsJN] gi|187714266|gb|ACD15490.1| HemY domain protein [Burkholderia phytofirmans PsJN] Length = 396 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 48/415 (11%), Positives = 127/415 (30%), Gaps = 56/415 (13%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ ++ +V V + + S + + L L Sbjct: 3 IRGLLWLALLFVIAVVLAVVGRFDMGQVLLIYPPYRVDISLNLFVVGLVVLFILIYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + R P + + K + AL + ++ A A K Sbjct: 63 IFRNIWRMPQRVAAYRARSRVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122 Query: 113 ------------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 ++ +E+L + E + A ++ R Sbjct: 123 GLIAATAAHRMHEYARRDEWLSQIDEA-------DWQDAR-----LMATADMRADGR--- 167 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKK 216 D + A T+ + +++ K W + + ++ Sbjct: 168 --------DADGALTALTQMQSQGGRRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAI 219 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNK 275 + R R + + D + +++ + + + AA+ L++ N+ Sbjct: 220 HPAVAVRLRQLAAENLLRDRRHNADALLELWNSLSATERHSPRL---ADLAAELLVALNR 276 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++A I+E+ N + Y + + +++A ++ E + + + ++ Sbjct: 277 PQEARKIVEEALAQNWDARLLRRYPDTAGGDALPLIQKAEGWQKDRPEDADLMFALGRLC 336 Query: 336 LEMGSIDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 L +A + A+K+A + LA++ + ++ +SAL Sbjct: 337 LHQQLWGKAQSFLERALKLADNETLKIRSHRALARLHEQLGDAEKASQHYRESAL 391 >gi|253991601|ref|YP_003042957.1| protoheme IX biogenesis protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783051|emb|CAQ86216.1| bacterial HemY porphyrin biosynthesis protein [Photorhabdus asymbiotica] Length = 402 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 113/374 (30%), Gaps = 27/374 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I N TS + I L R + + R Sbjct: 21 VAGHQGYVLIQTDNYNIETSVTGLFIIFILLQLVLCFLGWCYRRVMRTSSRTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + L+ +A + ++ + + + YLL + A + Sbjct: 81 RSRARAQTKEALIKLAEGDFKQVEQLLTRNADHA--EQPVINYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR G++++A+ K L+ +P P V Sbjct: 139 QYLERAAEVADNNQLPVDITRV-------RIQLAQGEIHAARHGVDKLLNQAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Q Y + I L + + + +R R I + + Sbjct: 192 LAEQAYTRSNAHQSLIDILPTMEKIRLHDELQIHRLRQQAYIGLMNQYMAEQGSEGLKRW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + + ++ LI + A+ I+ + K + + L SE+ Sbjct: 252 WHDQNRKIRHDVALQVAISEHLIECDDHETAQKIILESLKRQYDERLLLLIPRLKSEDPT 311 Query: 309 GKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 K L+ K+ + ++ + +IAL G +QA A+ P + LA Sbjct: 312 PIQK---ALDHQLKQHDATPLLNSTLGQIALRHGQWEQATKDFKAALAQRPDAHDYAWLA 368 Query: 366 QIEQANSHNTDKIL 379 + Sbjct: 369 DALDKLRKPEEAAQ 382 >gi|296313854|ref|ZP_06863795.1| HemY family protein [Neisseria polysaccharea ATCC 43768] gi|296839584|gb|EFH23522.1| HemY family protein [Neisseria polysaccharea ATCC 43768] Length = 407 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 124/398 (31%), Gaps = 14/398 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 LLADADDAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRRLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387 + + P L+LA++ E + + A+ Sbjct: 358 IALQPSVSARLVLAKVFDETGETQKAEAQRNLVLEAVS 395 >gi|325137817|gb|EGC60392.1| hypothetical protein NMBES14902_1440 [Neisseria meningitidis ES14902] Length = 405 Score = 78.8 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 53/367 (14%), Positives = 113/367 (30%), Gaps = 14/367 (3%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 Y DV I G + R + + L + W LF L+ P + R K Sbjct: 24 YTGDVYIVLGQTMLRINLHAFVLGLLIAVVVWYFLFKFVIGILNIPEKMQRFSLARKGRK 83 Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEYLVYLLEVQIALAERQYNIAHEK 142 L ++ A S V N L +L A + Sbjct: 84 AALYLNKAGLAYFEGRFEKAELEASRVLGNKEAGDNRTLALMLGAHAAGQMGNTELRDRY 143 Query: 143 LEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 L + ++P ++ + Y L E + D + + A ++ + ++ Sbjct: 144 LAEIAKLPEKQQLSRYLLLAESALNRRDYETVEANLHAAAKMNAGLTRLVRLQLRYAFER 203 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI- 260 + A+ L + +K +K + ++ + A LK +S+ Sbjct: 204 GD---ALEVLAKTEKLSKAGALGESETKQYQNWAYRRQLADAADAAALKTCLKRIPDSLK 260 Query: 261 --MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRA 314 S+ A+ A +++ + N PE+ + L + + A Sbjct: 261 NGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFA 320 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI--EQANS 372 + ++ L+ + ++A +A ++ + P L+LA++ E Sbjct: 321 DAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEP 380 Query: 373 HNTDKIL 379 + Sbjct: 381 QKAEAQR 387 >gi|328953733|ref|YP_004371067.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328454057|gb|AEB09886.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 808 Score = 78.4 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 112/310 (36%), Gaps = 29/310 (9%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNI 138 KG A ++ + + A K+ S V +++ + LL AL+++ Sbjct: 342 QAKGRMA----MVHASRGRVAEAEKLASEVLKENPKDMVATRTMGLL----ALSKKDGLA 393 Query: 139 AHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A ++ Q P R L +L A+ A KAL++ D + Sbjct: 394 AVNNFRLITQDQPQNPEARLL----LAQAHLVNNELEQAKEQAKKALELKADYLEARRFL 449 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 Y+ K++ AI + + +N L+A K D+ + + + Sbjct: 450 YGLYLRNKDYDGAIQTIQGYLR----YNEKDLFNLLALGEVYLAKEDLAKARATFQKVIA 505 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVG 309 L + + A+ + Q + +A L++ + +P+ + IY L + V Sbjct: 506 LDPKNPIGYFELARMELKQKQTDQAVKHLKQALEQDPNFIKGLQLLTAIY--LEQDKPVQ 563 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 ++ + + + L ++ +I L D+A A I PR+ L L I Sbjct: 564 AVEVLRQSLARSPNNPVILQMLGEIFLAQKKSDEAAQALEKAFTINPRQLSALRLLVIAY 623 Query: 370 ANSHNTDKIL 379 + + DK+ Sbjct: 624 QQNPDVDKVK 633 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 104/294 (35%), Gaps = 42/294 (14%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAV- 157 L + + +Y VYL++ Q+ + A LE + P + E + Sbjct: 148 GKLEAAIEKLQEAKQLDPKKYEVYLIQAQMESNRKNLERAVAILEEGIKANPDSEELLLA 207 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++ + A++Y +A+ + P + + + Y+LA + +A L+Q+ Sbjct: 208 RGRVADAQKQ--FPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQALHQQLGL 265 Query: 218 AKEWNRNRAILLI-------------ARSLENADKGDMIASYHDAIESLKLC-------- 256 + N A+ L + A K + A+ L Sbjct: 266 EPD-NEKHAVALTKFLVGRGKVKEGEQVLKDFAAKHPDNNAARFALADFYLSRRQEGRGL 324 Query: 257 -------------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYT 300 + + A A S+ + +AE + ++ K NP +A Sbjct: 325 KTLQEIVDRDPTGPSGLQAKGRMAMVHASRGRVAEAEKLASEVLKENPKDMVATRTMGLL 384 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L ++ + + + + ++ E+ +++++ L ++QA +A A+++ Sbjct: 385 ALSKKDGLAAVNNFRLITQDQPQNPEARLLLAQAHLVNNELEQAKEQAKKALEL 438 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 86/225 (38%), Gaps = 19/225 (8%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E GD A+ A+ I P V + + + + A L+Q + + Sbjct: 40 KELYDKGDYVRARLQFKNAVQIDPKYAESFLWVAKTEIKLQNYRGAFGALSQAAE--LDP 97 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A +L+ R + + D + +L+L + + AA +Q K A Sbjct: 98 KLLEAQILLGRIYLSGKRLDEAEARLK--TALELAPKNSDVLLLAASLAAAQGKLEAAIE 155 Query: 282 ILEKIWKVNPHPEIANIYT-HLLSENTVGKLKRALRL----EEINKESVESLVIVSKIAL 336 L++ +++ P+ +Y E+ L+RA+ + + N +S E L+ ++A Sbjct: 156 KLQEAKQLD--PKKYEVYLIQAQMESNRKNLERAVAILEEGIKANPDSEELLLARGRVAD 213 Query: 337 EMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQANSH 373 +A + A+K+ P+ ++L Q+++A Sbjct: 214 AQKQFPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQA 258 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 7/182 (3%) Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 +A ++ P + + Y+ K A + K A E + +L+ + A Sbjct: 91 QAAELDPKLLEAQILLGRIYLSGKRLDEA----EARLKTALELAPKNSDVLLLAASLAAA 146 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---I 295 +G + A+ E+ +L + A+ ++ +A ILE+ K NP E + Sbjct: 147 QGKLEAAIEKLQEAKQLDPKKYEVYLIQAQMESNRKNLERAVAILEEGIKANPDSEELLL 206 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 A + K L ++ + +++ + G +D+A + + Sbjct: 207 ARGRVADAQKQFPEAEKYFLEAVKLEPQKASLQSELARHYILAGQLDKAEQALHQQLGLE 266 Query: 356 PR 357 P Sbjct: 267 PD 268 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 52/373 (13%), Positives = 109/373 (29%), Gaps = 107/373 (28%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL++++ + A ++Q LL Q L + A E+ + L+ Sbjct: 380 TMGLLALSKKDGLAAVNNFRLITQDQ--PQNPEARLLLAQAHLVNNELEQAKEQAKKALE 437 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + A A LY R D + A + L + + A+ + Y+ ++ ++A Sbjct: 438 LKADYLEARRFLYGLYLRNKDYDGAIQTIQGYLRYNEKDLFNLLALGEVYLAKEDLAKAR 497 Query: 209 TFLNQ---------------KKKNAKEWNRNRAILLIARSLEN---------------AD 238 + + K+ ++A+ + ++LE + Sbjct: 498 ATFQKVIALDPKNPIGYFELARMELKQKQTDQAVKHLKQALEQDPNFIKGLQLLTAIYLE 557 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------------ 286 + + + +SL N+ + + ++Q K +A LEK Sbjct: 558 QDKPVQAVEVLRQSLARSPNNPVILQMLGEIFLAQKKSDEAAQALEKAFTINPRQLSALR 617 Query: 287 -----WKVNPHPEIANIYTHLLSENTV-------------GKLKRALR------------ 316 ++ NP + + + + +LK + Sbjct: 618 LLVIAYQQNPDVDKVKMELEAKTNDPKAPPFYILAQAMFYERLKDYNKASEVYNRMIERN 677 Query: 317 ----LEEIN-----------KESVESLVIVSKIALE------------------MGSIDQ 343 L + N E+ + + + ALE G Q Sbjct: 678 LFPILAKNNLAYLLANHLQSPENYQKALTLVSEALEESPEDPNILDTKGWILCQQGDFPQ 737 Query: 344 AHAKAMLAMKIAP 356 A A +IAP Sbjct: 738 AVTYLEQATEIAP 750 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 5/137 (3%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA----VYSLYFESCRIGDLNSAQ 174 L + + YN A E M++ A Y L + A Sbjct: 646 PPFYILAQAMFYERLKDYNKASEVYNRMIERNLFPILAKNNLAYLLANHLQSPENYQKAL 705 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 ++AL+ SP+ P + + ++ +A+T+L Q + A + L + Sbjct: 706 TLVSEALEESPEDPNILDTKGWILCQQGDFPQAVTYLEQATEIAPNNPALKYHLAYCLAK 765 Query: 235 ENADKGDMIASYHDAIE 251 DK I + +E Sbjct: 766 -LGDKEKAIGTLEKLLE 781 >gi|308188848|ref|YP_003932979.1| Protein hemY [Pantoea vagans C9-1] gi|308059358|gb|ADO11530.1| Protein hemY [Pantoea vagans C9-1] Length = 398 Score = 78.1 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 66/385 (17%), Positives = 129/385 (33%), Gaps = 9/385 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML++ F ++ + +++ + V I N TS ++ IL L + + Sbjct: 1 MLKVFILFILLIAGVVLGPMIAGHQGYVLIQTDNWNIETSVTGLVIILIISLLVILAVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R L A R + + + LM +A + K+ S H Sbjct: 61 LLRRVLHTGARTRGWFTGRKRRRAQRHTQSALMKLAEGDHRQVEKLLSK-DADHA-DVPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179 YLL + A A++ LE ++ + V + + ++A+ + Sbjct: 119 ANYLLAAEAAQQRGDEIRANQHLERAAELSESNTIPVEIARARIQLARNEDHAARHSIDR 178 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNR---NRAILLIARSL 234 L+++P P V Q YV WS + L +K E +R + L + Sbjct: 179 LLEVAPRHPEVLRLAEQAYVRTGAWSALLDILPAMQKAQVGDELHRDALQQQAWLGLMNQ 238 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 AD+G + S K + + A LI N A+ I+ + K + Sbjct: 239 AMADQGSDGLKRWWSTLSRKTRQD-TTLQVAMADHLIECNDHDTAQSIVLEGLKRHYDDR 297 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + + S N K + + + + + ++ + G QA A+ Sbjct: 298 LVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAADALQQALAQ 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379 P + LA + + Sbjct: 358 RPDAFDYAWLADVYDRLHRPEEAAK 382 >gi|227325805|ref|ZP_03829829.1| putative protoheme IX biogenesis protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 397 Score = 77.7 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 116/365 (31%), Gaps = 9/365 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I N +TS ++ +L F A++ + V R + R Sbjct: 21 VAGHQGYVLIQTDNYDIQTSVTGLVIMLVLFFLAFLAVEWVLRRIFRTGSRTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A Sbjct: 81 RTRARKQTKAALLKLAEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTK 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + + ++A+ K L+++P P V Q ++ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLARNEDHAARHGVDKLLEVAPRHPEVLRLAEQAFL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254 +S + L +K + R + L ++ + G + Sbjct: 199 RTHAYSALLDILPAMRKINL-YPEARLLDLQQQAYIGLMNQAMADGGSEGLKLWWNNQSR 257 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I + + L+ + A+ I+ K + + L + N K Sbjct: 258 KVRHEIPLQVTMVEHLLECDDHDTAQKIILDGLKRQYDERLILLMPRLKAGNPEQLEKVL 317 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + + + ++ ++ G QA A+++ P + A Sbjct: 318 HQYIKQQGATPLLSSTLGQLLMKHGEWQQASDAFRTALELRPDAYDYAWRADALDRLRLP 377 Query: 375 TDKIL 379 + Sbjct: 378 DEAAQ 382 >gi|325131986|gb|EGC54685.1| hypothetical protein NMBM6190_1290 [Neisseria meningitidis M6190] Length = 405 Score = 77.7 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 52/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D ++ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEVSEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + + PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|91774388|ref|YP_544144.1| HemY-like protein [Methylobacillus flagellatus KT] gi|91708375|gb|ABE48303.1| HemY-like protein [Methylobacillus flagellatus KT] Length = 393 Score = 77.7 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 121/358 (33%), Gaps = 15/358 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M LI F+++L I ++ + V I S ++L ++ + LL Sbjct: 1 MRVLIWILFILALAIGVSLLAGNNEGYVLIVRPPYRLELSLNLLLILIVLAFVSLHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + R G+ AL L +++ LA K + + Sbjct: 61 FIHYARDLPANVRAYKENRRIRLGHAALLEALHAMSQGRYQLALK--AASKALDYGEDPS 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178 L LL + + + + + A L + D + A Sbjct: 119 LTALLAARASHKL-KQKGQRDYYLAEAERLAPEAAVARLLMQAELLLDDRLYSQALDVLH 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENA 237 K I P ++ + W + +T L Q +K+ E + R I A A Sbjct: 178 KIEKIEPRFVPAMRLELKVQLRLNNWEQVLTLLQQLEKHDGMESWQVREIRHQAHQHLIA 237 Query: 238 DKGDMIASYHDAIESLKLCDNS-IMASICAAKSLISQNKKRKAEVILE----KIWKVNPH 292 + + + + D + A++LI N +A+ ++E K W Sbjct: 238 RYSKDLNALMAYWKKVPEDDKLNTRIANIMAEALIKLNAGNQAQEVIEMSLTKTWDS--- 294 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 E+A S N +L++A +++ + L+ + K+ + +G +A + Sbjct: 295 -ELAGKLGDCASTNPHKQLQQAEHWLLSHEQDAQLLLSLGKMCVRLGLWGKAQSYLEA 351 >gi|300312226|ref|YP_003776318.1| porphyrin biosynthesis protein [Herbaspirillum seropedicae SmR1] gi|300075011|gb|ADJ64410.1| porphyrin biosynthesis protein [Herbaspirillum seropedicae SmR1] Length = 399 Score = 77.7 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 116/398 (29%), Gaps = 33/398 (8%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++++ + + +++ P +V + + S + + ++ Sbjct: 1 MKILLWLLTLFASAIGLAVLARFNPGNVVLFYPPYRIDLSLNFFIFAVLAVFLVIYVVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P + + ++ KAL L + A K + S N Sbjct: 61 AIRLTQKLPGRVIAYRRAKRENESNKALRDALKAYFEGRFGQAEKSATRAS--DLPDNAG 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYA 177 + L+ + A + + + + ++ T + + + A Sbjct: 119 IAALIGARAAHRMRQGER---RDIWLASTEVDPTLKAARLMTALELQVDEHHFKQALETV 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARS 233 + + ++ AK W + + + + NR R ++ Sbjct: 176 EELNANGTRHIQALQWALKANQQAKNWPEVLRLVQTLDKRNALHPALSNRLR---EMSYD 232 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILE----KIWK 288 +D+ S ++ D ++ AA++ S+ +A +LE W Sbjct: 233 ALLSDRSHDAESIRLLWNAVPSADKLKPYIAVRAAQAFSSRGLHDEARSLLERGLAADWD 292 Query: 289 VNPHPEIANIYTHLLSENTVGKL----KRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + + Y +E L + N E + + L +A Sbjct: 293 IR----LLRAYRESTAEAGSPALLSQIEHCESWLSKNPTDAELALTLGMFCLRQKLWGKA 348 Query: 345 HAKAMLAMKIA--PR--KEIFLLLAQIEQANSHNTDKI 378 A+ A PR +E L LAQ+ +A Sbjct: 349 QRHLEQALSDAIEPRTVRESHLALAQLHEALDQPDQAA 386 >gi|255743929|ref|ZP_05417884.1| HemY-like protein [Vibrio cholera CIRS 101] gi|262151168|ref|ZP_06028307.1| HemY-like protein [Vibrio cholerae INDRE 91/1] gi|262167038|ref|ZP_06034755.1| HemY-like protein [Vibrio cholerae RC27] gi|255738412|gb|EET93802.1| HemY-like protein [Vibrio cholera CIRS 101] gi|262024556|gb|EEY43240.1| HemY-like protein [Vibrio cholerae RC27] gi|262031062|gb|EEY49687.1| HemY-like protein [Vibrio cholerae INDRE 91/1] Length = 382 Score = 77.3 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 109/361 (30%), Gaps = 18/361 (4%) Query: 22 SHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 + V I+ NR S ++ I+ + L F V + + + R Sbjct: 6 AGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEFLVKKILYTSFHTW-NWFSVRK 64 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + G++ + + A K + + H L YL+ + A Sbjct: 65 QRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMPLLCYLVASEAANGMGDRAK-R 121 Query: 141 EKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 ++ + AV L + GD +A T+ P V + Q Y Sbjct: 122 DRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETLTQLQRNHPHNTVVLNLLKQCY 180 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-----KGDMIASYHDAIESL 253 EW + L + K + N L I KG H A S Sbjct: 181 QALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGILQDIASPKGSEGLMQHWAQLSR 240 Query: 254 KLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 KL +M I LI + +A ++++ K PE+ + L + + Sbjct: 241 KLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQATPELYALLPELNISDRHPLI 297 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 + + E+ + ++ L A A+ + + LA + Sbjct: 298 ALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEKALSLRSSVSDYAYLADALEKQ 357 Query: 372 S 372 + Sbjct: 358 N 358 >gi|119776389|ref|YP_929129.1| HemY protein [Shewanella amazonensis SB2B] gi|119768889|gb|ABM01460.1| HemY protein [Shewanella amazonensis SB2B] Length = 388 Score = 77.3 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 68/411 (16%), Positives = 145/411 (35%), Gaps = 46/411 (11%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++ + Y +I + +C + + ++ TS + +L ++ Sbjct: 1 MIKTLIYLGIILIGLCLSPYIVGNTGYLYLSAWGYEIETSLVFAIVVLVIAYGVIVIAEW 60 Query: 61 V----SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115 + L + R L G +++A N P A + M ++ Sbjct: 61 IAVKSISLVLGSRYLPERW---RRNAAKRHTL-NGALALAEENWPDAERFMAKGAAKGEL 116 Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSA 173 L Q + +Y + LE + P T F + Y Sbjct: 117 PALNLLAAARAAQ---HQGKYAERDDYLEKAVTEPNAATAVFTTRTRYLLKQ------GQ 167 Query: 174 QRYATKALD-ISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNA-------KEWN 222 A AL+ ++P + + ++ Y+ ++W L KK+A ++ + Sbjct: 168 LERARTALNHLAPTSKSSAAVIKLAMEVYLAQQDWRAVRELLPAIKKHALLNDANFEDLS 227 Query: 223 RNRAILLIARSL----ENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ L+ ++ ++ DK S + + + A L Q KK Sbjct: 228 VRVSVKLLEQAGSKDWDSLDKEWQWLSRSEKQLSANRAA---------YALGLAKQGKKA 278 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +A +L K + P P++ + +L+ ++ L+L ++ E V+++ + Sbjct: 279 EAVKLLLKDLESLPDPQVLALLPQVLNGQDEAPRQQLLKLAPRFEDVHEYHECVARLCQQ 338 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 A+ A ++ P KE +L LA++++ NTD L + A A Sbjct: 339 AREFKTAYEHWRKACELNPSKENWLALAELDE-QLGNTDLALQHYRRAAKA 388 >gi|304398145|ref|ZP_07380020.1| HemY protein [Pantoea sp. aB] gi|304354431|gb|EFM18803.1| HemY protein [Pantoea sp. aB] Length = 398 Score = 77.3 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 64/385 (16%), Positives = 129/385 (33%), Gaps = 9/385 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML++ F ++ + +++ + V I N TS ++ IL L + + Sbjct: 1 MLKVFILFILLIAGVVLGPMIAGHQGYVLIQTDNWNIETSVTGLVIILILSLLVILAVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R L A R + + + LM +A + K+ S H Sbjct: 61 LLRRVLHTGARTRGWFTGRKRRRAQRHTQSALMKLAEGDHRQVEKLLSK-DADHA-DVPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179 YLL + A A++ LE ++ V + + ++A+ + Sbjct: 119 ANYLLAAEAAQQRGDEARANQHLERAAELSENNTIPVEIARARIQLARNEDHAARHSIDR 178 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNR---NRAILLIARSL 234 L+++P P V Q Y+ WS + L +K+ E +R + L + Sbjct: 179 LLEVAPRHPEVLRLAEQAYIRTGAWSALLDILPSMQKSQVGDELHRDALQQQAWLGLMNQ 238 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 AD+G + S K + + A LI + A+ I+ + K + Sbjct: 239 AMADQGSDGLKRWWSTLSRKTRQD-TTLQVAMADHLIECDDHDTAQSIVLEGLKRHYDDR 297 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + + S N K + + + + + ++ + G QA A+ Sbjct: 298 LVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAADALQQALAQ 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379 P + LA + + Sbjct: 358 RPDAFDYAWLADVYDRLHRPEEAAK 382 >gi|311105079|ref|YP_003977932.1| HemY, N-terminal domain-containing protein [Achromobacter xylosoxidans A8] gi|310759768|gb|ADP15217.1| HemY, N-terminal domain protein [Achromobacter xylosoxidans A8] Length = 540 Score = 76.9 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 50/370 (13%), Positives = 116/370 (31%), Gaps = 16/370 (4%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 + +V + S + + ++ + + + L+ P + KR + Sbjct: 24 HSGNVLLLVWPWRINMSLTLAVLLIVAAFIVLYVGLRLLAWLLAIPDRVRAWRGKRAQAR 83 Query: 84 GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 ++ L G + + A K + + Q L L + +++ ++ Sbjct: 84 DHELLERGWIGLLEGRYTTAEKDLTKLLDQTKVQTRRVLAALSAARATHGLGEFDR-RDR 142 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD-ISP------DAPWVTEAVV 195 L Q A + + + + D+ Q A +AL + P ++ Sbjct: 143 LLATAQEQAGTDAGL--IEATATVSADMLLDQGRAERALGVLEPLADGGARHLHTMRLLL 200 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI---ARSLENADKGDMIASYHDAIES 252 + + + L + R A LLI + A ++ + Sbjct: 201 RAHTALHH-DEQVFTLARGLVRRNALARAEADLLIDASGAARLRAAAAGGSEAWRAIWKD 259 Query: 253 LKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 LK + + ++ A + + + +A +LE V +P + Y +E +L Sbjct: 260 LKAEERLLPEIALAGAAAFEAVGEASEAARVLEAAVAVKFNPALVAAYARCEAEQVSRRL 319 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 RA + + L + + L QA + ++ + LL + Sbjct: 320 ARAETWLQQRPTDPDLLTALGMLCLNGQLWGQAERYLLRSLSRRSDAQTHALLGSLYDRL 379 Query: 372 SHNTDKILYW 381 D + +W Sbjct: 380 ERPADAVRHW 389 >gi|54310584|ref|YP_131604.1| protoheme IX synthesis protein HemY [Photobacterium profundum SS9] gi|46915027|emb|CAG21802.1| hypothetical HemY protein [Photobacterium profundum SS9] Length = 395 Score = 76.9 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 54/416 (12%), Positives = 119/416 (28%), Gaps = 51/416 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++L+ + I +++ V I+ N+ S ++ ++ + L+ Sbjct: 1 MIKLLLLVAALIAGIVVGPMLAGNQGYVLISAANQTIEMSLTTLILLVVVLFGVFFLVET 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + LS + R K GLM + + A K+ ++ + Sbjct: 61 ILKRLLSASSSTRGWFSGRKVRKARIQTSNGLMKVIEGDWKQAEKLVVKSAKH---SDTP 117 Query: 121 LVYLLEV------------------QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 L+ L Q A + ++A LQ Y Sbjct: 118 LLNYLAAAQAAQGQGNATLRDEYLQQAAELD-DNSLAVALTRAKLQ------------YR 164 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ A + P + + Y+ ++W + L Q +K Sbjct: 165 QAQ----YEQALATLQDIKQNNNRNPILLALLKDCYIQLEDWQPLLRLLPQLEKTGVLTA 220 Query: 223 RNRAILLIARSLENADKGDMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNK 275 + L + + + K I C K +I + Sbjct: 221 QQATELELQAECGLMAHIGQHSGSDGLMGHWNTLSRKAKQRPELI---CCFVKEMIKRKA 277 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +A +L K P + ++ L + + R L + + + + ++ Sbjct: 278 DSEAYTVLCDSLKKQTDPRLISLVAELNLPDVHPAIVRLQDLLRFDSSNPATHSALGQLF 337 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI---LYWTQSALHA 388 + ++A A+K+ P + L ++ N AL A Sbjct: 338 IREQKWEEAKTHFEQAIKLGPTVSDYAYLVEVLDKLDDNQGAADVSRQALTLALPA 393 >gi|325981151|ref|YP_004293553.1| HemY domain-containing protein [Nitrosomonas sp. AL212] gi|325530670|gb|ADZ25391.1| HemY domain protein [Nitrosomonas sp. AL212] Length = 391 Score = 76.9 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 46/401 (11%), Positives = 122/401 (30%), Gaps = 61/401 (15%) Query: 2 LRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++LI + + + + + S+ + ++ + L Sbjct: 1 MKLIVWLIALFAAAVVVTLTAKHITGHASLVMPPYQLELPLDQFIIVVIVAFLVFYFLVR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-E 119 ++ + + K + L +GL + + A+K + + + Sbjct: 61 LTLGIFG-------FSKRHRHKKTDEMLLSGLKAYFEGDFVKAQKNAAVALKLANSATVK 113 Query: 120 YLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFES---CRIGDLNSAQ 174 + ++ + A Q A ++ + Q+P + L ++ G+ A Sbjct: 114 AISAVIAARSAHKLNQ-VNARDQYLNNALNQVPGEKSL---CLATKAEFQLDDGNYQDAL 169 Query: 175 RYATKALD---ISPDAPWVTEAVVQQYVLAKEWSRAI---TFLNQKKKNAKEWNRNRAIL 228 + + P A + E ++ + W + L +++ K + + Sbjct: 170 KTLQSLYSGGGLQPTAVLLLE--LEAQQRGRNWDAVLELTEVLEKRQSANKTYIKKLKH- 226 Query: 229 LIARSLENADKGDMIASYHDAIESL-------------KLCDNSIMASICAAKSLISQNK 275 + AI+S K+ A++ +S IS Sbjct: 227 ----------DAQIENIRSKAIDSQSLNQYWLHISPMEKMDSKLCAAAV---RSYISLGN 273 Query: 276 KRKAEVILEK----IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 A I+E+ W ++ +Y L + +++ A + + + L+ + Sbjct: 274 CATANRIIEQNVPITWDN----DLIELYAECLDYHVNRQIECAEVWLKSQPNNAQLLLTL 329 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 K+ +A ++ + P + LAQ+ + Sbjct: 330 GKLCTHCELWGKAQNYLEASLSVEPSYKAHFALAQLNEKLG 370 >gi|262189997|ref|ZP_06048302.1| HemY-like protein [Vibrio cholerae CT 5369-93] gi|262034120|gb|EEY52555.1| HemY-like protein [Vibrio cholerae CT 5369-93] Length = 382 Score = 76.9 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 104/361 (28%), Gaps = 18/361 (4%) Query: 22 SHYPEDVSITWGNRLYRTSPFV-ILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 + V I+ NR S ++ I+ + L F V + + + R Sbjct: 6 AGQQGYVLISIANRTIEMSVTTLVIFIIGALAALFALEFLVKKILYTSFHTW-NWFSVRK 64 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + G++ + + A K + + H L YL+ A Sbjct: 65 QRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMPLLCYLVASAAANGMGDRAK-R 121 Query: 141 EKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + AV L + GD +A T+ P V + Q Y Sbjct: 122 DHYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETLTQLQRNHPHNTVVLNLLKQCY 180 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE------- 251 EW + L + K + N L I ++ Sbjct: 181 QALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGILQDIASQKGSEGLMQHWAQLSR 240 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 LK +M I LI + +A ++++ K PE+ + L + + Sbjct: 241 KLKAEPELLMCFIT---QLIHRKADYEAFSMIKESLKKQATPELYALLPELNISDRHPLI 297 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 + + E+ + ++ L A A+ + + LA + Sbjct: 298 ALLEEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEKALSLRSSVSDYAYLADALEKQ 357 Query: 372 S 372 + Sbjct: 358 N 358 >gi|26986933|ref|NP_742358.1| HemY domain protein [Pseudomonas putida KT2440] gi|24981543|gb|AAN65822.1|AE016210_10 hemY protein [Pseudomonas putida KT2440] Length = 412 Score = 76.5 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 128/365 (35%), Gaps = 14/365 (3%) Query: 19 IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78 I V+ + V I++G Y++ + L+ + + LL + L+ ++ + Sbjct: 20 IAVAKHSGYVLISYGGFRYQSGLWAALAGILAVVLLLWLLRYLVGLVLTSSGVVNPWSRR 79 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 + A+ G + +A A++ +H + L YL + A + + Sbjct: 80 NRSRRIRLAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + LE L+ E A+ + + G+ + A + P V + + Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGENDGALETLLAMQERHPHNGQVLRLLQR 196 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248 YV +WS I L +K A L L + D S Sbjct: 197 LYVERGDWSALIRLLPDLRKGKVLPPAELAALEQRAWGQNLSLATTRGEDALSARQSLER 256 Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 A + L + A A+ L + +AE +L K + +A +Y + ++ Sbjct: 257 AWQQLTAAQRQEPQLVLAYAEQLRQVGAQNEAEQVLRTALKRDYESHLARLYGLVRGDDP 316 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L+ A + + + L+ + +++L+ +A ++++ E LA++ Sbjct: 317 ARQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARL 376 Query: 368 EQANS 372 Sbjct: 377 LAGLG 381 >gi|83643191|ref|YP_431626.1| putative protein of heme biosynthesis [Hahella chejuensis KCTC 2396] gi|83631234|gb|ABC27201.1| uncharacterized enzyme of heme biosynthesis [Hahella chejuensis KCTC 2396] Length = 416 Score = 76.5 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 72/397 (18%), Positives = 137/397 (34%), Gaps = 38/397 (9%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 L+ + V F++ V ++W N L T+ ++ L++L F FA LF Sbjct: 6 LVLLISLAIGVALGFLVQLD-AGYVRVSWLNWLLETNVWIALALLIGFYFALHYLFRTLS 64 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 L+ A KR Y + + GL+ A N A+K S ++Q + L+ Sbjct: 65 TTLAVRAGWRQWRKKRKYSRAQQNTIRGLLHYAEGNWKQAQKFLSGSAEQ---SDTPLIN 121 Query: 124 LLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q A + L+ + A+ G + + A L+ Sbjct: 122 YLASAQAANELGNEKESDLFLKKAFDNTPGGDVAI----------GVTQAQLQLARGQLE 171 Query: 183 I-----------SPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILL 229 +P P+V + + Q Y +W + L +K K K+ + L Sbjct: 172 QCLSTLLNLRKKTPHHPFVLKLLQQVYTRLNDWQKMSEILPELRKYKVLKDDEVEKLELE 231 Query: 230 IARSLENADKGDMIASYHDAIESLKLCD--NSIMASI--------CAAKSLISQNKKRKA 279 +L + + S L + + A++ A L+ +A Sbjct: 232 TWLNLLRHACDEALRGRKGDFNSEPLNAIWDRMPANLRKNPHVIYAYASQLMRLGASGQA 291 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 E +L K K + + ++Y + N +L A + L+ + ++ L Sbjct: 292 ETLLRKALKQHWSDILIDLYGQIAGANVAEQLLAAEHWLKERPNDAGLLLALGRLCLRNE 351 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 +A ++K+ R+E + LA++ A Sbjct: 352 RWSKAKEYFEASLKLKRRRETYYELARLLAAMDQPQA 388 >gi|313496559|gb|ADR57925.1| HemY [Pseudomonas putida BIRD-1] Length = 412 Score = 76.5 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 129/365 (35%), Gaps = 14/365 (3%) Query: 19 IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78 I V+ + V I++G Y++ + L+ + + LL + L+ ++ + Sbjct: 20 IAVAKHSGYVLISYGGFRYQSGLWAALAGILAVVLLLWLLRYLVGLVLTSSGVVNPWSRR 79 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 + A+ G + +A A++ +H + L YL + A + + Sbjct: 80 NRSRRIRLAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + LE L+ E A+ + + G+ + A + P V + + Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGENDGALETLLAMQERHPHNGQVLRLLQR 196 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248 YV +WS I L +K A L L + D S Sbjct: 197 LYVERGDWSALIRLLPDLRKGKVLPAAELAALEQRAWGQNLSLATTRGEDALSARQSLER 256 Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 A + L + A A+ L + +AE +L K + +A +Y + ++ Sbjct: 257 AWQQLTAAQRQEPQLVLAYAEQLRQVGAQNEAEQVLRTALKRDYESHLARLYGLVRGDDP 316 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 V +L+ A + + + L+ + +++L+ +A ++++ E LA++ Sbjct: 317 VRQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARL 376 Query: 368 EQANS 372 Sbjct: 377 LAGLG 381 >gi|304387911|ref|ZP_07370084.1| HemY family protein [Neisseria meningitidis ATCC 13091] gi|254669888|emb|CBA04384.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Neisseria meningitidis alpha153] gi|304338008|gb|EFM04145.1| HemY family protein [Neisseria meningitidis ATCC 13091] Length = 405 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|238021064|ref|ZP_04601490.1| hypothetical protein GCWU000324_00961 [Kingella oralis ATCC 51147] gi|237868044|gb|EEP69050.1| hypothetical protein GCWU000324_00961 [Kingella oralis ATCC 51147] Length = 397 Score = 76.5 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 51/397 (12%), Positives = 123/397 (30%), Gaps = 34/397 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M +LI F+ I ++ Y +V R + + +F W LL Sbjct: 1 MKQLIWIIFLFLCAIGLAMLAKTYTGNVYFVVEGYSLRMNLNFFIIAALLSVFVWYLLIK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P L R K + L ++ A + V + Sbjct: 61 LLVSIFGTPHRLSQFGASRRSRKAVQELNAAGLAYFEGKFQEAAQHADKVLANKQAGDNR 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYAT 178 ++ L+ A + A ++ + + L + D ++A + T Sbjct: 121 MLALMLAAHAADQSHNTEARDQYLNDIAQLPGKAQLSRHLLLAESALNQQDYDTANTHLT 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A I+P + ++ + + A+ L++ +K +RA + + Sbjct: 181 AAAQINPRLTRLARLQLRMALDKGD---ALDILDKTEK------LHRAGAMNETEAQQTA 231 Query: 239 KGDMIASYHDAIESL--KLCDNSIMAS-------ICAAKSLISQNKKRKAEVILEKIWKV 289 + A +++ K C I + + A+ +A W Sbjct: 232 EVAYRKLLDLATDAVGMKACLKRIPETLRNNALNVAIARKYNELGLYDQAI-----AWVN 286 Query: 290 NPHPEIANI------YTHLLSENTVGKLKRALRLEEINKESV-ESLVIV--SKIALEMGS 340 +P + + + + K + K++ ++ +++ ++A + Sbjct: 287 THYPATRDANLLPPFVASVRYLDDRRQQKAIDTGDAWLKDNPKDARLLMYLGELAAQKQL 346 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 +A ++ + P + L+LA++ +S Sbjct: 347 WGKAQGYLEASLSLHPAPQTRLVLAKVYDHSSRPDAA 383 >gi|212710183|ref|ZP_03318311.1| hypothetical protein PROVALCAL_01237 [Providencia alcalifaciens DSM 30120] gi|212687182|gb|EEB46710.1| hypothetical protein PROVALCAL_01237 [Providencia alcalifaciens DSM 30120] Length = 397 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 55/392 (14%), Positives = 120/392 (30%), Gaps = 23/392 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ F V+ I +++ + V I + TS ++ F + L Sbjct: 1 MIKVFVLFIVLIAGIILGPLLAGHQGYVFIRTDSYDITTSVTSLVLCFILLQFVLLFLGW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R F+S + Y K + L+ +A ++ ++ +S+ F + Sbjct: 61 CYRRFMSTTSRTKGWFTGHKYHKAHTQTQKALLKLAEGDLE---QVEKLMSKHADFSQQP 117 Query: 121 LVY-LLEVQIALAERQY--------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 ++ L+ + A A + L + +R G+++ Sbjct: 118 VINYLMAAEAAQQRGDSYRTHQYLDRAAEAAGKDQLPVNISRV-------RIQLAEGEIH 170 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAI 227 +A+ K LD +P P + Q Y+ + I L + + E + Sbjct: 171 AARNGIDKLLDQAPRHPEILRLAEQAYLGTGAYQALIELLPIMAKVQLHSEDELEALKLK 230 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + +G + + + A+ LI R AE ++ + Sbjct: 231 AYKGLMNQCMAEGGSDGLKTWWKNQPRKVRHEVPLQSFLAEHLIECGDARSAEKMIIEGL 290 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 K + + L S+ K L L + + + + +AL+ ++A Sbjct: 291 KQQYDERLLLLIPKLHSDQPEAIEKTLLSLVKQSGATPLLNSTLGILALQHAQWEKAETY 350 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+ LA + Sbjct: 351 FKAALAQRFDAYDAAWLADAYDKLHKPHEAAK 382 >gi|268592918|ref|ZP_06127139.1| protein HemY [Providencia rettgeri DSM 1131] gi|291311710|gb|EFE52163.1| protein HemY [Providencia rettgeri DSM 1131] Length = 397 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 128/385 (33%), Gaps = 9/385 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++++ F V+ I +++ + V I N TS ++ F + L Sbjct: 1 MIKVLILFIVLIAGIILGPLLAGHQGYVFIRTDNYDITTSVTSLVLGFILLQFVLLFLGW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R F+S + + R Y K + L+ +A + ++ +S+ F + Sbjct: 61 CYRRFISTTSRTRGWVSGRKYHKAHTQTQKALLKLAEGDFE---QVEKLMSKHADFSQQP 117 Query: 121 LVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYAT 178 ++ L+ + A H+ L+ + + + V S G++++A+ Sbjct: 118 VINYLMAAEAAQQRGDEYRTHQYLDRAAEAAGSDQLPVDISRVRIQLAEGEVHAARNGID 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234 K LD +P P V Q Y+ + + I L + N E + + Sbjct: 178 KLLDKAPRHPEVLRLAEQAYLRSGAYQSLIELLPVMAKVQLHNEDELDALKLKAYKGLMN 237 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + +G + + A+ LI AE ++ K Sbjct: 238 QYMAEGGSDGLKAWWKAQPRRVRHETALQAFLAEHLIECGDTASAEKMIIDGLKQQYDER 297 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + L SE K L L++ N + + ++L+ D+A A+ Sbjct: 298 LLLLVPKLNSERPEIIEKTLLHLQKQNGATPLLNSTLGVLSLQHAQWDKAETYFKAALAQ 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379 + LA ++D Sbjct: 358 RFDVQDASWLADAFDRQHKSSDAAK 382 >gi|152978037|ref|YP_001343666.1| HemY protein [Actinobacillus succinogenes 130Z] gi|150839760|gb|ABR73731.1| HemY protein [Actinobacillus succinogenes 130Z] Length = 420 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 15/221 (6%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R++ + + L ++ V I N Y S ++ L F L + Sbjct: 1 MFRVL-FLMLALLAGLIAGPYLAGKQGYVLIQTENYNYELSIVTLIIFLVFALAVIYGIE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + F + +R K K GLM + + A K+ ++ Sbjct: 60 WLVSRFCRLSNSTYGWFSRRKRMKAQKQTLEGLMRMNEGDYSKAEKLIGKNAKH--SEEP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE------SCRIGDLNSA 173 L ++ + A A++ L I AT +L E + L +A Sbjct: 118 ILNFIKAAEAAQQRGDDFSANKYL-----IEATELAGSDNLLVELARTRILLQQQKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + L ++P P V + V+ Y +K ++ L Q Sbjct: 173 RSSVDSLLILAPKNPEVLKLAVEIYRKSKAYAALDDILQQA 213 >gi|90414238|ref|ZP_01222218.1| hypothetical HemY protein [Photobacterium profundum 3TCK] gi|90324685|gb|EAS41226.1| hypothetical HemY protein [Photobacterium profundum 3TCK] Length = 395 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 56/416 (13%), Positives = 126/416 (30%), Gaps = 51/416 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++L+ + I +++ V I+ N+ S ++ ++ + L+ Sbjct: 1 MIKLLLLVAALIAGIVVGPMLAGNQGYVLISAANQTIEMSLTTLILLVVVLFGVFFLVET 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + LS + R K GLM + + A K+ ++ + Sbjct: 61 ILKRLLSAGSSTRGWFSGRKVRKARVQTSNGLMKVIEGDWKQAEKLVVKSAKH---SDTP 117 Query: 121 LVYLLEV------------------QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 L+ L Q A + ++A LQ Y Sbjct: 118 LLNYLAAAQAAQGQGNATLRDEYLQQAAELD-DNSLAVALTRAKLQ------------YR 164 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ A + P + + Y+ ++W ++ L Q +K Sbjct: 165 QAQ----YEQALATLQDIKQNNNRNPILLALLKDCYIQLEDWQPLLSLLPQLEKTGVLTA 220 Query: 223 RNRAILLIARSLENADK------GDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNK 275 + L + D + + +A+ K I C K +I + Sbjct: 221 QQVTELELQAECGLMAHIGQHSGSDGLMGHWNALSRKAKQRPELI---CCFVKEMIKRKA 277 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +A +L K P + ++ L + + R L + + + + ++ Sbjct: 278 DSEAYTVLCDSLKKQTDPRLISLVAELNLPDVHPAIVRLQDLLRFDSSNPATHSALGQLF 337 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI---LYWTQSALHA 388 ++ ++A A+K+ P + L ++ + N AL A Sbjct: 338 IQEQKWEEAKTHFEQAIKLGPTVSDYAYLVEVLDKLNDNQGAADVSRQALTLALPA 393 >gi|302036459|ref|YP_003796781.1| hypothetical protein NIDE1096 [Candidatus Nitrospira defluvii] gi|300604523|emb|CBK40855.1| conserved protein of unknown function, contains TPR repeats [Candidatus Nitrospira defluvii] Length = 466 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 103/310 (33%), Gaps = 36/310 (11%) Query: 1 MLRLIRYFFVISLVICSFIIVSH-YPEDVSI-TWGNRLYRTSPFVILSILYFFLFAWILL 58 M RL+ F++S+ I + P +++ T + L+ SP +S++ F + L Sbjct: 1 MFRLLSTIFLVSVGIFLYSYFRELNPGTITVRTSPDALFELSP---VSLVLFSMALGATL 57 Query: 59 FAVSRFFLSCPAMLFHMLHKR--NYDKGYKAL----YTGLMSIAAHNIPLARKMHSYVSQ 112 A+ + + R + AL MS A ++ + Sbjct: 58 VALIVTIKETSHVFMNWRTNRLVRRKEKVDALHRDGTHAFMS-----KRTADAVNLFERA 112 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 N L I +E Y A + +I ++ DL Sbjct: 113 LVIDPNRTDSLLWLGNIYRSESNYTEAIRLHQQAHRIEE------RNVEVLLELAKDLEG 166 Query: 173 AQRYATKAL-------DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 A+RY AL I PD + ++WS A+ ++ K + R Sbjct: 167 ARRY-EDALQTLQNILRIEPDNLMALIRKRDLQIRLEKWSDALEIQHRLVKANLPESERR 225 Query: 226 AI------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 A + + ++G + ++K + A I + L+ + K + A Sbjct: 226 AESNLLLGCMYEVGRQLLERGHPDKARRYFRGAIKKDRTFLPAYIGIGEILVREGKTKNA 285 Query: 280 EVILEKIWKV 289 IL+KI+ Sbjct: 286 VEILKKIYAK 295 >gi|330721771|gb|EGG99759.1| HemY [gamma proteobacterium IMCC2047] Length = 423 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 130/396 (32%), Gaps = 59/396 (14%) Query: 1 MLRLIRYFFVISLVIC-SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M RL ++ + + ++ V +++ N TS ++ L +L + + Sbjct: 1 MKRLFLLIMLVLVASYYAAAKIAEDAGYVLLSYKNITIETSLWIGLVLLLGLVIIAYMSI 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + L AM+ + + +GL+ + N A+K S + Q + Sbjct: 61 WLLIRILGSRAMVQRWRRNFRHKRSVSKTTSGLIDLVEGNWKHAQKKLSQAAPQ---SDT 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ L A A E + P + ++ Q + Sbjct: 118 PLINYLSAARAAAANNDPNGSELFLKKAHESTPGAELA--IGITKA-----EIEIQQEHF 170 Query: 178 TKALDI-------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +A P + + + Q Y+ ++W A+ L + + + R Sbjct: 171 EQARATLVVLRQSHPKHKHIAQLLQQVYIALEDW-EALQELTPLLRKLRVASDAR----- 224 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNS------------IMASI--------CAAKSL 270 L++ +K ++ + A E D + A I +++ Sbjct: 225 ---LDDLEKQAVLKALERAAEQQPDQDQFDCANHLHRVWLRVPARIRQFEEVTGLYVQNM 281 Query: 271 ISQNKKRKAEVILEKI----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 +AEV L + W +A Y L +EN ++K A R + + +S E Sbjct: 282 QRLGDLVRAEVALRETLDNRWSDK----LAVDYGLLSAENPQAQIKSAERWLKKHSDSAE 337 Query: 327 SLVIVSKIALEMGSIDQAHAKAM--LAMKIAPRKEI 360 + + +++L +A M LA++ P Sbjct: 338 LKLTLGRLSLRNQLWGKAREFFMGSLALRETPEAHA 373 >gi|289677625|ref|ZP_06498515.1| HemY, N-terminal:HemY, N-terminal:HemY, N-terminal [Pseudomonas syringae pv. syringae FF5] gi|330976466|gb|EGH76518.1| HemY [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 414 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 125/359 (34%), Gaps = 18/359 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL + + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVVALLVIALLRLLISLLTTSGRVVNPWSRRNRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ T + L Y+ + A + +Y Sbjct: 84 RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD + A + P P V + + + Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTDGALTTLLAMKERHPHNPQVLRQLQRLHQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A L L A S + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPPKELAELERRAWGENLSLAAYSEGIEGAPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGTDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L+ A + + L+ + +I L+ +A ++++ E LA++ Sbjct: 320 KQLQAAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRMERNPETCAELARL 378 >gi|304414151|ref|ZP_07395519.1| putative protoheme IX synthesis protein [Candidatus Regiella insecticola LSR1] gi|304283365|gb|EFL91761.1| putative protoheme IX synthesis protein [Candidatus Regiella insecticola LSR1] Length = 397 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 52/367 (14%), Positives = 119/367 (32%), Gaps = 9/367 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL A +++ + R + Sbjct: 21 LAGHQGYVLIQTDNYNIETSVTAMIIILVLVFVALLIIEWILRRIFRTGYYTRGWFIGQK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 ++ K L+ +A + K+ + + + YLL + A + Sbjct: 81 RNRASKQTKAALIKLAEGDFKQVEKLLTCNADHA--EQPMVNYLLAAEAAQQRGDERRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + L + P V Q ++ Sbjct: 139 QYLERAAEVADTNQLPVDITRVRIQLAQGQIHAARHGVDRLLGHASQHPEVLRLAEQAFL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + + L KK L + + ++ + Sbjct: 199 STGAHNALLDILPTMKKMRLHSEAEIKTLELQAYIGIMNQCMAEEGSEGLKRWWQSQPGK 258 Query: 260 I--MASICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 I +++ AA + LI + + A+ I+ K + ++ L SE+ K Sbjct: 259 IRRESALQAALVEHLIECDDHQIAQQIILTGLKRQYDERLISLMPLLKSEDAKALEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS--H 373 + + + ++ L+ G +QA A++ P + LLA Sbjct: 319 LQIKQQGATPLLNSTLGQLLLKQGEWEQASEAFRAALQQRPDGHDYALLADTLDKLHRPK 378 Query: 374 NTDKILY 380 + ++ + Sbjct: 379 DAAEVRH 385 >gi|330970390|gb|EGH70456.1| HemY [Pseudomonas syringae pv. aceris str. M302273PT] Length = 414 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 123/359 (34%), Gaps = 18/359 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL + + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVVALLVIALLRLLITLLTTSGRVVNPWSRRNRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ T + L Y+ + A + +Y Sbjct: 84 RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD A + P P V + + Y Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A L L A + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGNDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L+ A + + L+ + +I L+ +A ++++ E LA++ Sbjct: 320 KQLQTAEGWLKQHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378 >gi|183600274|ref|ZP_02961767.1| hypothetical protein PROSTU_03834 [Providencia stuartii ATCC 25827] gi|188020065|gb|EDU58105.1| hypothetical protein PROSTU_03834 [Providencia stuartii ATCC 25827] Length = 397 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 123/385 (31%), Gaps = 9/385 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ F V+ I +++ + V I N TS ++ F + L Sbjct: 1 MIKVFILFIVLIAGIILGPLLAGHQGYVFIRTDNYDITTSVTSLVLSFILLQFVLLFLGW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R F+S + + R Y K + L+ +A + ++ +S+ F + Sbjct: 61 CYRRFISTTSRTKGWVSGRKYHKAHSQTQKALLKLAEGDF---DQVEKLMSKHADFSQQP 117 Query: 121 LVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYAT 178 ++ LL + A H+ L ++ + + V S ++ +A+ Sbjct: 118 VINYLLAAEAAQQRGDEYRTHQYLNRAAEVAGSDQLPVDISRVRIQLAEDEVYAARTGID 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 K LD +P P + Q Y+ + + I L K L + + Sbjct: 178 KLLDQAPRHPEILRLAEQAYLRSGAYQALIELLPVMAKVQLHSEDELEALKLKAYKGLMN 237 Query: 239 KGDMIASYHDAIESLKLCDNSI--MASI--CAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + E K I ++ A+ LI N AE I+ K Sbjct: 238 QCMAENGSEGLKEWWKAQPRKIRHEIALQSFLAEHLIECNDMESAEKIIIDGLKQQYDER 297 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + L S+ K +L + + + + +IAL+ + A + A+ Sbjct: 298 LLLLAPRLRSDKPEQLEKVLKQLVKQSGATPLLNSTMGQIALQHAQWEHAESYFKAALAQ 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379 LA + Sbjct: 358 RFDAHDAAWLADALDKLHKAEEAAK 382 >gi|218767899|ref|YP_002342411.1| hypothetical protein NMA0990 [Neisseria meningitidis Z2491] gi|121051907|emb|CAM08213.1| hypothetical protein NMA0990 [Neisseria meningitidis Z2491] gi|319410146|emb|CBY90482.1| putative heme biosynthesis protein HemY [Neisseria meningitidis WUE 2594] Length = 405 Score = 75.7 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 124/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P + R K AL ++ A S V N Sbjct: 61 FIIGVLNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|52424328|ref|YP_087465.1| HemY protein [Mannheimia succiniciproducens MBEL55E] gi|52306380|gb|AAU36880.1| HemY protein [Mannheimia succiniciproducens MBEL55E] Length = 437 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 73/220 (33%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M +++ + + L +S V I GN S ++ + + +L Sbjct: 1 MFKVL-FLMLALLAGLVAGPYLSGKQGYVLIATGNYNIEMSITTLIILFIAAMAVVYILE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 F + KR +K + GLM + + A K+ ++ Sbjct: 60 WAISHFFKWSNATYTFFSKRKRNKAQRQTLEGLMRMTEGDYSKAEKLIGKNAKHSA--EP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE------SCRIGDLNSA 173 L ++ + A A+ L I AT +L E + L +A Sbjct: 118 ILNFIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVELARTKILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++P P V + + Y+ S+A + L+ Sbjct: 173 RSSVDSVLEMAPRNPEVLKLATEIYLR----SKAYSTLDN 208 >gi|325127890|gb|EGC50794.1| hypothetical protein NMXN1568_1359 [Neisseria meningitidis N1568] Length = 405 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|254804658|ref|YP_003082879.1| HemY protein [Neisseria meningitidis alpha14] gi|254668200|emb|CBA04941.1| HemY protein [Neisseria meningitidis alpha14] gi|325203866|gb|ADY99319.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] Length = 405 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + + PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|325202424|gb|ADY97878.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] gi|325207824|gb|ADZ03276.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 405 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|186476928|ref|YP_001858398.1| HemY domain-containing protein [Burkholderia phymatum STM815] gi|184193387|gb|ACC71352.1| HemY domain protein [Burkholderia phymatum STM815] Length = 396 Score = 75.7 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 52/389 (13%), Positives = 121/389 (31%), Gaps = 21/389 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR + + + + IV V + + S + + + L Sbjct: 3 LRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + ++ K + AL A N+ R + + + + N Sbjct: 63 IVRNIWRMPQRVAAYRARQRVAKAHAALRD-----AIGNLYAGRFSRAEKAARDSLANPD 117 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + E + QI A + R D + A T Sbjct: 118 NKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATADMRADGRDADGALLALT 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234 + + ++ K W + + ++ + R R + Sbjct: 178 EMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLR 237 Query: 235 ENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D + H + + + AA+ L++ N+ ++A I+E+ N Sbjct: 238 DRRHNADALLELWHSLTPTERHSPRL---ADLAAELLVALNRPQEARKIVEEALAQNWDA 294 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + Y + + +++A + E + L + ++ L +A + A+K Sbjct: 295 RLLRRYPDTTGGDALPLIQKAEAWRKERPEDADLLFALGRLCLHQQLWGKAQSFLEQALK 354 Query: 354 IAPRK----EIFLLLAQIEQANSHNTDKI 378 +A + LA++ + + K Sbjct: 355 LADNETLKIRSHRALARLHE-QLGDVSKA 382 >gi|302187600|ref|ZP_07264273.1| HemY, N-terminal [Pseudomonas syringae pv. syringae 642] Length = 414 Score = 75.4 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 124/359 (34%), Gaps = 18/359 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL + + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVVVLLVIALLRLLITLLTTSGRVVNPWSRRNRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ T + L Y+ + A + +Y Sbjct: 84 RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD + A + P P V + + Y Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTDGALTTLLAMKERHPHNPQVLRQLQRLYQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A L L A + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPPKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L+ A + + L+ + +I L+ +A ++++ E LA++ Sbjct: 320 KQLQTAEGWLKQHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378 >gi|66043330|ref|YP_233171.1| HemY, N-terminal [Pseudomonas syringae pv. syringae B728a] gi|63254037|gb|AAY35133.1| HemY, N-terminal:HemY, N-terminal:HemY, N-terminal [Pseudomonas syringae pv. syringae B728a] Length = 414 Score = 75.4 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 123/359 (34%), Gaps = 18/359 (5%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + V I + N Y +S + L++L L LL + + ++ + Sbjct: 24 EHSGYVLIAYQNFRYESSLWATLALLVVALLVIALLRLLITLLTTSGRVVNPWSRRNRRR 83 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + A+ G M +A A++ ++ T + L Y+ + A + +Y Sbjct: 84 RVQIAIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDAL 141 Query: 143 LEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE L+ E A+ + GD A + P P V + + Y Sbjct: 142 LERALERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQ 199 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDA 249 +WS + + + +K+ + A L L A + S A Sbjct: 200 QRGDWSDVVRLMPELRKDKVLPAKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESA 259 Query: 250 IESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L + A A L + +AE +L K + +A +Y + + + Sbjct: 260 WQGLGSAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPL 319 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L+ A + + L+ + +I L+ +A ++++ E LA++ Sbjct: 320 KQLQTAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378 >gi|308388966|gb|ADO31286.1| hypothetical protein NMBB_0881 [Neisseria meningitidis alpha710] gi|325129907|gb|EGC52708.1| hypothetical protein NMBOX9930304_1289 [Neisseria meningitidis OX99.30304] gi|325135997|gb|EGC58607.1| hypothetical protein NMBM0579_1331 [Neisseria meningitidis M0579] Length = 405 Score = 75.4 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 53/390 (13%), Positives = 123/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + + PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|307826234|ref|ZP_07656443.1| HemY domain protein [Methylobacter tundripaludum SV96] gi|307732696|gb|EFO03564.1| HemY domain protein [Methylobacter tundripaludum SV96] Length = 410 Score = 75.4 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 118/374 (31%), Gaps = 22/374 (5%) Query: 20 IVS--HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLH 77 + P V I G TS V L F + + F + L P + + Sbjct: 25 WLGGFENPGYVLIGIGYWSLETSLIVFAVSLIMGFFVFYIFFRFLGWLLRLPGQIKNRGK 84 Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQY 136 +++ +AL GL+ A N A K+ + + + L++ L + A + Y Sbjct: 85 SIKFNRSQEALIAGLVDSAEGNWEKAEKV---LIKHASHSGAPLIHYLTAARAAQSRGAY 141 Query: 137 NIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + E L+ + A+ L A + T+ I P V + + Sbjct: 142 DKRDEYLKKAADQAPGSDVAI-GLTQAELHLSEKQFEQALQTLTRLQSIDPTHASVLKLL 200 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 Q Y A +W + N +L + + S + Sbjct: 201 HQAYQQAGDWEGIRKLIPSLNNNKVLMEAEIKLLETEAFSKLLKQAAERGSADEIDSLWS 260 Query: 255 LCDNS------IMASICAAKSLISQNKKRKA--EVILEKIWKVNPHPEIANIYTHLLSEN 306 + + A AA K + L W + ++ ++ S + Sbjct: 261 EIPDYIRNMKGVSAIYFAAMIDAGAGAKVEGGLSRALSTTWDQT----LVVLFGNVQSID 316 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +L+ A + ++ L ++ K++++ G +A ++ I P + L Sbjct: 317 VARQLETAEQWLPMHPRDAVFLTVLGKLSMKCGDNQKATTYLTKSLSIEPTVPAYQLFGD 376 Query: 367 IEQANSHNTDKILY 380 + A + D+ Sbjct: 377 LLSAQ-GDKDRASE 389 >gi|152985285|ref|YP_001351319.1| HemY protein [Pseudomonas aeruginosa PA7] gi|150960443|gb|ABR82468.1| HemY protein [Pseudomonas aeruginosa PA7] Length = 412 Score = 75.4 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 136/394 (34%), Gaps = 24/394 (6%) Query: 1 MLRL-IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R+ + V+ + + +S V I + + Y +S + L++L +L+ Sbjct: 1 MRRVYLLILAVVLVATLVGLAISEQAGYVLIAYKSFRYESSLWSFLALLAVVWLLVVLVR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V R S ++ + A ++GL + N P A + ++ Sbjct: 61 LVLRLLGSSGRVVNPWSRYNRRRRVQMAEHSGLRDLGEGNWPQALRHLRRAAE---MGER 117 Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRY 176 L++ L + A +Y+ A + L + + + L GD A+ Sbjct: 118 PLMHYLGAARAANELERYDEADDLLNRAREREPDAQL-LVGLTRAQLLINRGDYPQARNT 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL------NQKKKNAKEWN-RNRAILL 229 + + P V + Q YV +W +A+ L + K+++ + RA + Sbjct: 177 LEELHGLQPQHRTVLRLLQQLYVTQHDW-QALCVLLPELRKERVLKDSELRDLERRAWVA 235 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSI---MASIC-AAKSLISQNKKRKAEVILEK 285 + + + + + +++ A + A L+ + +AE +L Sbjct: 236 SLQEAGERGLNEGETALQPLTQRWQNVPSALRGDPAVVAGYAAQLLRLGAEEEAEEVLRH 295 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + +Y + + +L+ A + + + L+ + ++ L +A Sbjct: 296 ALKQGFDATLVQLYGQVRGRDPAKQLQAAEGWLKEHPDDPGLLLTLGRLCLVNKLWGKAR 355 Query: 346 AKAMLAMKIAPRKEIF----LLLAQIEQANSHNT 375 ++ E LLAQ+ + N Sbjct: 356 EYLEASLSFQRSAETCAELGRLLAQLGEVERSNQ 389 >gi|325206379|gb|ADZ01832.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 407 Score = 75.4 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 125/398 (31%), Gaps = 14/398 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + + PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPQSRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387 + + P L+LA++ E + A+ Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQRNLVLEAVS 395 >gi|148545468|ref|YP_001265570.1| HemY domain-containing protein [Pseudomonas putida F1] gi|148509526|gb|ABQ76386.1| HemY domain protein [Pseudomonas putida F1] Length = 412 Score = 75.4 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 57/366 (15%), Positives = 128/366 (34%), Gaps = 16/366 (4%) Query: 19 IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78 I V+ + V +++G Y++ + L+ + + LL + L+ ++ + Sbjct: 20 IAVAKHSGYVLVSYGGFRYQSGLWAALAGILAVVLLLWLLRYLVGLVLTSSGVVNPWSRR 79 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 + A+ G + +A A++ +H + L YL + A + + Sbjct: 80 NRSRRIRLAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + LE L+ E A+ + + G+ + A + P V + + Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGENDGALETLLAMQERHPHNGQVLRLLQR 196 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN---------ADKGDMIASYH 247 YV +WS A+ L + K L R+ D S Sbjct: 197 LYVERGDWS-ALIRLMPDLRKGKVLPAAELAALEQRAWGQNLSLATTRGEDALSARQSLE 255 Query: 248 DAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 A + L + A A+ L + +AE +L K + +A +Y + ++ Sbjct: 256 RAWQQLTAAQRQEPQLVLAYAEQLRQVGAQNEAEQVLRTALKRDYESHLARLYGLVRGDD 315 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +L+ A + + + L+ + +++L+ +A ++++ E LA+ Sbjct: 316 PARQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELAR 375 Query: 367 IEQANS 372 + Sbjct: 376 LLAGLG 381 >gi|317046387|ref|YP_004114035.1| HemY protein [Pantoea sp. At-9b] gi|316948004|gb|ADU67479.1| HemY protein [Pantoea sp. At-9b] Length = 398 Score = 75.0 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 63/382 (16%), Positives = 118/382 (30%), Gaps = 24/382 (6%) Query: 11 ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70 I+ V+ + ++ + V I N TS + IL L + + V R A Sbjct: 12 IAGVVLGPM-LAGHQGYVLIQTDNWNIETSVTGLAIILILSLLVILFVEWVLRRLFRTGA 70 Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 R + + T LM +A + K+ S H YLL + A Sbjct: 71 RTRGWFTGRKRRRAQRHTQTALMKLAEGDYKQVEKLLSK-DADHA-DQPVANYLLAAEAA 128 Query: 131 LAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 A++ LE + + TR + ++A+ + L+ Sbjct: 129 QQRGDELRANQHLERAAELSQNDTIPVEITRV-------RLQLARNEDHAARHGIDRLLE 181 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-----LIARSLENA 237 ++P P V Q Y+ W + L +K + RA L L + A Sbjct: 182 VAPRHPEVLRLAEQAYIRTGAWGALLDILPSMQKVQINDDTQRAALQQQAWLGLMNQAMA 241 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D+G +S K + + + LI + A+ I+ K + Sbjct: 242 DQGSDGLKRWWHNQSRKTRQETALQVAMV-EHLIECDDPDTAQAIVLDGLKRQYDDRLVL 300 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + S + K + + + + ++ + G QA A+ P Sbjct: 301 LMPRIKSGDPAALEKALRNQIKQHGATPLLHSTLGQMLMRHGEWQQAAEAFQQALAQRPD 360 Query: 358 KEIFLLLAQIEQANSHNTDKIL 379 + LA + + Sbjct: 361 AFDYAWLADVYDRMHRPEEAAK 382 >gi|269103736|ref|ZP_06156433.1| HemY-like protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163634|gb|EEZ42130.1| HemY-like protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 395 Score = 75.0 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 48/387 (12%), Positives = 119/387 (30%), Gaps = 12/387 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++L+ + I ++ V I++ + S ++ ++ L + ++ Sbjct: 1 MIKLLLLIAALIAGIVVGPDLAGSQGYVLISFAEQTIEMSLTTLVILIVALLALFFVVEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R S + +R K GL+ + + A K+ + ++ Sbjct: 61 ILRGLFSMGSSTRGWFSQRKARKARTLTADGLVKVIEGDWKQAEKLVTKAAKN--SDAPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYAT 178 L YL + + + E L+ + L R A Sbjct: 119 LNYLAAAEASQELGNTDQRDEYLKRAAECDGQNLA--VGLVRAKLQIRQQQYEQALATLQ 176 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + + V + + Y+ ++W + L Q +K+ + L + Sbjct: 177 EIKRDNGRNLIVLNLLKECYIQLEDWKALLEILPQLEKDGVITTETKNQLELDAQRGLMV 236 Query: 239 KGDMIASYHDAIE-----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + + + + KL S++ + + +I+ N A +L + K Sbjct: 237 QIAKQSGSDGLMSHWNGLNRKLKQQSVLVAAFV-EQMINCNADNDAYTVLREYLKKTSDD 295 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + N+ L + + R L + + + + ++ G +A A+ Sbjct: 296 TLINLVPKLKLSDNHPAIVRLQDLLRHDSRNAATHSALGQMFAANGKWQEAKEHFTQAVA 355 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILY 380 + P + L Q + + Sbjct: 356 LRPDVSDYAHLVQTLENLDDSQGAAQA 382 >gi|24375798|ref|NP_719841.1| hemY protein, putative [Shewanella oneidensis MR-1] gi|24350746|gb|AAN57285.1|AE015863_14 hemY protein, putative [Shewanella oneidensis MR-1] Length = 388 Score = 75.0 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 62/405 (15%), Positives = 140/405 (34%), Gaps = 36/405 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++++ +F +I L +C + V I G+ TS + +L F + +L Sbjct: 1 MIKVLIFFGIILLGLCISPWIVGNTGYVYIAAGDYQLETSLAFGIIMLIVFYALFQVLEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVS--QQHTFH 117 + ++ + H+ K G ++IA + P A R M + + Sbjct: 61 LVITVINLLLRSRFIPHQWRRRSAKKHTLMGALAIAEEDWPAAERAMIKGADNGELPALN 120 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSA 173 + Q AER +A + + + TR + + D Sbjct: 121 LLAAARAAQHQNKTAERDQYLARAETQPLAANAVATTRTRYLLKQGEFTLARAELD---- 176 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKEWNRN 224 + A + +P ++ Y ++W L+ + N+ + Sbjct: 177 -KLAPTSKSKAPVLKLA----LELYRAQQDWEALKLLLPILKKRQILDDIQLNSLSVETH 231 Query: 225 RAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A+L A + ++ S + +S L L N+K +A + Sbjct: 232 SALLQTASLKGEDALEQCWQWLSRDERNQSEFLA--------IYTMGLCRFNRKEQAIKL 283 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 L K + +P + + +++ + K+ L+ E ++ + + ++ + + + Sbjct: 284 LSKKLRSSPESALLEVIPQIVTAHDTDIRKQLLKHEITHENNADYQRCLALLYQQTRDMK 343 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 +A +IAP K+ +L LA+I++ + A+ Sbjct: 344 EAKTCWQNVCRIAPTKDSWLSLARIQE-QLGEQGHANQSYRQAVT 387 >gi|238756299|ref|ZP_04617614.1| hypothetical protein yruck0001_690 [Yersinia ruckeri ATCC 29473] gi|238705505|gb|EEP97907.1| hypothetical protein yruck0001_690 [Yersinia ruckeri ATCC 29473] Length = 397 Score = 75.0 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 126/384 (32%), Gaps = 7/384 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ F ++ I +++ + V I + TS + +L LF + + Sbjct: 1 MIRVLLLFLLLIAGIILGPMLAGHQGYVLIQTDDYNIETSITKLSIMLIALLFVLFAIES 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R A R + K L+ +A + ++ + + Sbjct: 61 VLRRMFRTGARTRGWFIGRKRSRARKQTKAALIKLAEGDFKQVEQLLTRNADHA--EQPM 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179 + YLL + A ++ LE ++ T + V + G +++A+ + Sbjct: 119 VNYLLAAEAAQQRGDEFRTNQYLERAAEVADTDQLPVDITRVRIQLAQGQIHAARHGVDR 178 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLE 235 L+ +P P V Q Y+ +S + L +K + L I + Sbjct: 179 LLEQAPRHPEVLRLAEQAYLGTGAFSSLLDILPAMQKVQLHTESEISALQQRAYIGIMNQ 238 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + + + +++ + A LI + + A+ ++ K + Sbjct: 239 CMAEEGSDGLKRWWHDQNRKVRHNVALQVALADHLIECDDHQVAQQVILDGLKRQYDERL 298 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + L S N K + + + + + ++ L+ G +QA A++ Sbjct: 299 ILLIPRLKSGNPEPLEKALRQQIKQHGATPLLNSTLGQLMLKHGEWEQASEAFRAALQQR 358 Query: 356 PRKEIFLLLAQIEQANSHNTDKIL 379 P + LA D Sbjct: 359 PDGYDYAWLADAYDKLHRPEDAAQ 382 >gi|261392853|emb|CAX50434.1| putative heme biosynthesis protein HemY [Neisseria meningitidis 8013] Length = 405 Score = 75.0 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRTPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|121634574|ref|YP_974819.1| hypothetical protein NMC0732 [Neisseria meningitidis FAM18] gi|161869723|ref|YP_001598890.1| hypothetical protein NMCC_0743 [Neisseria meningitidis 053442] gi|120866280|emb|CAM10021.1| hypothetical protein NMC0732 [Neisseria meningitidis FAM18] gi|161595276|gb|ABX72936.1| HemY protein [Neisseria meningitidis 053442] gi|325142015|gb|EGC64447.1| hypothetical protein NMB9615945_1382 [Neisseria meningitidis 961-5945] gi|325197999|gb|ADY93455.1| conserved hypothetical protein [Neisseria meningitidis G2136] Length = 405 Score = 74.2 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 122/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|53802804|ref|YP_115449.1| hemY protein [Methylococcus capsulatus str. Bath] gi|53756565|gb|AAU90856.1| putative hemY protein [Methylococcus capsulatus str. Bath] Length = 424 Score = 74.2 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 109/363 (30%), Gaps = 23/363 (6%) Query: 25 PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84 P V I +G +S V+ L + + + P +L R + Sbjct: 31 PGYVIIGYGPWTLESSLVVLAGALTLAFILFYASIRLVIHAMRLPKILRQRGGHRRNRQS 90 Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 +AL TGL+ A N A K + L+ L A R ++ Sbjct: 91 QEALITGLIESAEGNWEKAEKTLIRHAADSGV---PLINYLTAARAAHSRGAAEQRDEYL 147 Query: 145 MML--QIPATREFAVYSLYFESCRIGDL--NSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + +P L ++ D + A ++ I+P V + Q Y Sbjct: 148 KLAHEAVPEAEIA--IGLTRAELQLSDKQFDQALESLSQLNRIAPTHATVLRLLHQVYAQ 205 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDA----IESLK 254 ++W + N +L +L A+ A I + Sbjct: 206 MEDWEGLRNLIPSLHTNKVMMEAEIKLLETETYSALLKQHAETRDAARLKALWENIPAHI 265 Query: 255 LCDNSIMASICAAKSLISQN-KKRKAEVI-LEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 I AA + A L++ W + +Y + + +L Sbjct: 266 RKATGIETLYFAAMIDAGAGPEIEPAVRASLDREWSQT----VVVLYGCIQLPDPGEQLA 321 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQA 370 RA + + L ++ K+A+ + A ++ + P E L+ +E+ Sbjct: 322 RAEQWLVRHSNDAVLLRVLGKLAVLARQTESALRYLDRSLALEPSVEACQLMGDLLLERN 381 Query: 371 NSH 373 + Sbjct: 382 ETA 384 >gi|168048872|ref|XP_001776889.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671745|gb|EDQ58292.1| predicted protein [Physcomitrella patens subsp. patens] Length = 946 Score = 74.2 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 102/305 (33%), Gaps = 51/305 (16%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E + + E L+ ML+ P + E GD+ SA+ +A Sbjct: 582 RAAQLE-KSHGTRESLDAMLKKAVGYCPQAEVLWLMG-AKEKWLAGDVPSARAILQEAYA 639 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK--- 239 P++ + A + E RA L + ++ ++ R + N DK Sbjct: 640 AIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVEREIGNVDKERE 699 Query: 240 --------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 G A+ +L+ C +SI + AA Sbjct: 700 LLEEGLERFPQFHKLWLMLGQLKDRLGQPEAARETYERALRNCPHSIPLWLSAAALEEKL 759 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 KA +L K N H PE+ + E G K A L ++ S + Sbjct: 760 GGLSKARAVLTKARLKNTHNPELWLA--AIRVEAHAGNKKDAESLMAKALQDCPSSGRLW 817 Query: 332 SKIALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNT--DKILYWTQSAL 386 ++ A++M Q +K++ A+K P +A + + + DK W A+ Sbjct: 818 AE-AIDMAPRPQRKSKSVDALKRCDQDPYV-----IAAVAKLFWQDRKVDKARSWLNRAV 871 Query: 387 HAMPD 391 PD Sbjct: 872 TLAPD 876 >gi|242237683|ref|YP_002985864.1| protoheme IX biogenesis protein [Dickeya dadantii Ech703] gi|242129740|gb|ACS84042.1| HemY protein [Dickeya dadantii Ech703] Length = 397 Score = 74.2 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 55/373 (14%), Positives = 126/373 (33%), Gaps = 27/373 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML++ F ++ I +++ + V I N TS ++ +L L A+I L Sbjct: 1 MLKVFLLFAMLIAGIVVGPMLAGHQGYVLIQTDNYNIETSVTGLVIMLVLLLLAFIALEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R A R + + L+ + + K+ + + Sbjct: 61 LLRRLFRTGARTRGWFIGRKRSRARQQTRAALLKLTEGDYHQVEKLLTRNADHA--DQPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172 + YLL + A + LE + + TR + ++ Sbjct: 119 VNYLLAAEAAQQRGDDFRTRQYLERAAEIADNDQLPVDITRV-------RIQLARNEDHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNR 225 A+ + L+++P P V Q ++ +S + L +K + + + Sbjct: 172 ARHGVDRLLEVAPRHPEVLRLAEQAFLRTSAYSALLDILPAMRKTRIHDEAHLQSLQQRA 231 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 I L+ +++ A+ G ++ K+ + M A+ LI+ + ++ I+ Sbjct: 232 TIGLMDQAM--AEGGSEGLKQWWKNQNRKVRQDLSMQVAM-AEHLIACDDHTTSQNIIID 288 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + + L + N K + + + + ++ ++ G QA Sbjct: 289 GLKRQYDHRLVQLMPRLQTGNPEPLEKTLRQQLKQRADDALLHSTLGQLLMKHGEWKQAS 348 Query: 346 AKAMLAMKIAPRK 358 + A+ + P Sbjct: 349 EAFLAALALRPDA 361 >gi|113460196|ref|YP_718253.1| porphyrin biosynthesis protein [Haemophilus somnus 129PT] gi|112822239|gb|ABI24328.1| porphyrin biosynthesis protein [Haemophilus somnus 129PT] Length = 425 Score = 73.8 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 102/331 (30%), Gaps = 53/331 (16%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ V+ + +S V I + S +++ + L+ Sbjct: 1 MFRVLFLMLVLLAGLIGGPYLSGKQGYVLIQTASYNIEMSITMLVIFFVILMAIVYLIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V F + +R K + GL+ + + A K+ ++ Sbjct: 61 VVTRFFRLSNNTYSWFSRRKRVKAQRQTLEGLVKMNEGDYSKAEKLIGKNARH--SDKPI 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQ 174 L + + A +A+ L I AT SL E + L +A+ Sbjct: 119 LNLIKAAEAAQQRGDDFVANRYL-----IEATELAGTDSLIVEIARTRILLQQNKLPAAR 173 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEW-----------------SRAITFLNQKKKN 217 L+++ V + V+ Y+ + + S T L +K ++ Sbjct: 174 SSVDSLLEMTSRNKEVLKLAVKIYLKSAAFHALDKILDQIEKVGLYSSDEFTALQRKVED 233 Query: 218 A---------------------KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 RN + + D D ++Y AI++LK Sbjct: 234 GLLDEKMNEEGVDGLLRWWDEQPRKRRNDLYVKVGLIRRLLDSDDHESAYELAIDALKKV 293 Query: 257 DNSIMASICAAKSLISQ--NKKRKAEVILEK 285 +NS+ A++ + K +LEK Sbjct: 294 ENSVEANVALCTQITRLQPEDNSKLLKLLEK 324 >gi|325133707|gb|EGC56363.1| hypothetical protein NMBM13399_1423 [Neisseria meningitidis M13399] gi|325144183|gb|EGC66490.1| hypothetical protein NMBM01240013_1435 [Neisseria meningitidis M01-240013] Length = 407 Score = 73.8 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 124/398 (31%), Gaps = 14/398 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + P + R K AL ++ A S V N Sbjct: 61 FIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387 + + P L+LA++ E + A+ Sbjct: 358 IALKPSISARLVLAKVFDEIGEPQKAEAQRNLVLEAVS 395 >gi|254672849|emb|CBA07059.1| protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Neisseria meningitidis alpha275] Length = 405 Score = 73.8 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 123/390 (31%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P + R K AL ++ A S V N Sbjct: 61 FIIGVLNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E + Sbjct: 358 IALKPSISARLVLAKVFDETGEPQKAEAQR 387 >gi|123440579|ref|YP_001004573.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332159809|ref|YP_004296386.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|122087540|emb|CAL10321.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|325664039|gb|ADZ40683.1| putative protoheme IX biogenesis protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862555|emb|CBX72709.1| protein hemY [Yersinia enterocolitica W22703] Length = 399 Score = 73.8 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 117/365 (32%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L L A++++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKL 255 + +S + L K A L I + + + + Sbjct: 199 RSGAYSSLLEILPAMSKVQVHTAEEIAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L S N K Sbjct: 259 VRNEIPLQVALAEHLIECDDSDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPIEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QHIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|329898167|ref|ZP_08272364.1| HemY protein [gamma proteobacterium IMCC3088] gi|328920876|gb|EGG28313.1| HemY protein [gamma proteobacterium IMCC3088] Length = 386 Score = 73.8 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 62/370 (16%), Positives = 124/370 (33%), Gaps = 18/370 (4%) Query: 25 PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84 P V +T+ ++ +V +L +FA ++F + R +S P + R + Sbjct: 26 PGYVLLTFQGWRIESTVWVFAIVLAGGIFASSVVFRLLRSIVSAPGSIGRWHLGRKQRRT 85 Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 ++L L + S+ + + L +Q + A +L+ Sbjct: 86 QESLEQALEKAVLGDSKAVTDALRSASKCR---QDEWLKLATIQADIDHGDLKRAEAQLD 142 Query: 145 MM-LQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDISPDAPWVTEAVVQQYVL 200 + L + +V+ S G+ A Y +AL + V AV Sbjct: 143 ALTLSDSDLQSASVWLRAQLSYLQGEYTVANDYLAKLPEALKATVAVQRVKLAVKTLLAD 202 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + + L KE I L R E DM+A+Y +S + D+ + Sbjct: 203 HRAVMGLLATLPAGVMPNKERLARLTIALKHRLAECRAAQDMLAAYQSLTKSDQAQDDIL 262 Query: 261 MASICAAKSLISQNKKRKAEVI----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 +A A L+ + ++A + +K W E A+ + L + K+ Sbjct: 263 LAVFSA---LLREGHGQQAIELAGAHYKKAWPKTVLAEFAHAPSAALPSSPS---KKLAV 316 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 S L++ ++A + A + + LA++ A + + Sbjct: 317 WLGDEANSAAGLLLQGRLAAKQAIWGVAKTHLEKSYQAQQSAFTAQCLAKVCLA-IDDRE 375 Query: 377 KILYWTQSAL 386 + W + A Sbjct: 376 ASILWFERAA 385 >gi|168004776|ref|XP_001755087.1| predicted protein [Physcomitrella patens subsp. patens] gi|162693680|gb|EDQ80031.1| predicted protein [Physcomitrella patens subsp. patens] Length = 938 Score = 73.8 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 102/305 (33%), Gaps = 51/305 (16%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E + + E L+ ML+ P + E GD+ SA+ +A Sbjct: 574 RAAQLE-KSHGTRESLDAMLKKAVGYCPQAEVLWLMG-AKEKWLAGDVPSARAILQEAYA 631 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK--- 239 P++ + A + E RA L + ++ ++ R + N DK Sbjct: 632 AIPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVEREIGNVDKERE 691 Query: 240 --------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 G A+ +L+ C +SI + AA Sbjct: 692 LLEESLERFPQFHKLWLMLGQLKDRIGQPEAARDTYERALRNCPHSIPLWLSAAALEERL 751 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 KA +L K N H PE+ + E G K A L ++ S + Sbjct: 752 GGLTKARAVLTKARLKNTHNPELWLA--AIRVEAHAGNKKEAESLMAKALQDCPSSGRLW 809 Query: 332 SKIALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNT--DKILYWTQSAL 386 ++ A++M Q +K++ A+K P +A + + + DK W A+ Sbjct: 810 AE-AIDMAPRPQRKSKSVDALKRCDQDPYV-----IAAVAKLFWQDRKVDKARSWLNRAV 863 Query: 387 HAMPD 391 PD Sbjct: 864 TLAPD 868 >gi|113968729|ref|YP_732522.1| HemY domain-containing protein [Shewanella sp. MR-4] gi|117918840|ref|YP_868032.1| HemY domain-containing protein [Shewanella sp. ANA-3] gi|113883413|gb|ABI37465.1| HemY domain protein [Shewanella sp. MR-4] gi|117611172|gb|ABK46626.1| HemY domain protein [Shewanella sp. ANA-3] Length = 388 Score = 73.8 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 63/409 (15%), Positives = 141/409 (34%), Gaps = 44/409 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++ + + +I + +C + V I G+ TS + +L F + +L Sbjct: 1 MIKALIFLGIILIGLCISPWIVGNTGYVYIAAGDYQLETSLVFGIIMLIVFYALFQVLEW 60 Query: 61 VSRFFLSCPAMLFHML----HKRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVS--QQ 113 + ++ +L +R K + + G ++IA + P A R M + Sbjct: 61 LVITVINL--LLRSRFIPQHWRRRSAKKHTLI--GALAIAEEDWPAAERAMIKGADNGEL 116 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169 + + Q +AER +A + + M TR + D Sbjct: 117 PALNLLAAARAAQHQNKIAERDQYLARAEAQPMTANAVATTRTRYLLKQGELALARAELD 176 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220 + A + +P ++ Y ++W L K NA Sbjct: 177 -----KLAPTSKSKAPVLKLA----LELYRAQEDWEALKLLLPILKKRQILEDAKLNALS 227 Query: 221 WNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A+L A + ++ S + +S L A L N+K + Sbjct: 228 VETHCALLKAASLKGEDALEQCWQWLSRDERNQSEFLA--------IYAMGLCRFNRKDQ 279 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A +L K + +P + + +++ + K+ L+ E ++ + + ++ + + Sbjct: 280 ALKLLSKKLRSSPESALLEVIPQIVTAHDEEIRKQLLKHEITHENNADYQKCLALLYQQT 339 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + +A ++AP + +L LA+I++ + A++ Sbjct: 340 RDMKEAKTCWQNVCRLAPSQASWLSLARIQE-QLGEQGNANQSYRQAVN 387 >gi|312884195|ref|ZP_07743906.1| HemY protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368123|gb|EFP95664.1| HemY protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 395 Score = 73.8 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 68/229 (29%), Gaps = 8/229 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 MLRLI F I L + + V I N S +L + + +LL Sbjct: 1 MLRLIVLFIFIGLGLYVGTQSAGQQGYVFIAIANTAIEMSVTTLLVVFIMLITGILLLSK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + +R + G++ N LA K + H Sbjct: 61 LIKKVWRFSSESCEFFGRRKVRQARALTNEGIIQFLEGNFKLAEKNVTRHVNHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A + + + + AV S + R D + A + Sbjct: 119 LCYLVASEAAESRGNHQD-RDHYLELASQQENSRLAVEITRS--KQYIRAQDYDLAYQTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 P V + Q YV K W + + K + + Sbjct: 176 EPLFKTFPRNVIVLALLKQSYVQLKMWQPLLDLAPKLVKEKVITQQEKM 224 >gi|330952277|gb|EGH52537.1| HemY [Pseudomonas syringae Cit 7] Length = 414 Score = 73.8 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 101/295 (34%), Gaps = 18/295 (6%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A+ G M +A A++ ++ T + L Y+ + A + +Y LE Sbjct: 88 AIEQGQMDLAEGRWSSAQRHLQRAAEADT--HPLLYYIGAARAANEQGRYEDCDALLERA 145 Query: 147 LQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L+ E A+ + GD A + P P V + + Y + Sbjct: 146 LERQPQAELAI--ALNHAQLQQDRGDTEGALTTLLAMKERHPHNPQVLRQLQRLYQQRGD 203 Query: 204 WSRAITFLNQKKKNAKEWNRNRAIL----------LIARSLENADKGDMIASYHDAIESL 253 WS + + + +K+ + A L L A + S A + L Sbjct: 204 WSDVVRLMPELRKDKVLPAKELAELERRAWGENLSLAAYREGIEGAPTGLPSLESAWQGL 263 Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 + A A L + +AE +L K + +A +Y + + + +L+ Sbjct: 264 ASAQRQEPQLVLAYADQLRRLGAEAQAEEVLRSALKREYNSHLARLYGLVRGSDPLKQLQ 323 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 A + + L+ + +I L+ +A ++++ E LA++ Sbjct: 324 TAEGWLKHHPADPSLLLSLGRICLQGRLWGKARDYLESSLRLERNPETCAELARL 378 >gi|226946764|ref|YP_002801837.1| HemY-like protein [Azotobacter vinelandii DJ] gi|226721691|gb|ACO80862.1| HemY-like protein [Azotobacter vinelandii DJ] Length = 410 Score = 73.8 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 66/395 (16%), Positives = 139/395 (35%), Gaps = 28/395 (7%) Query: 1 MLRLIR-YFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M RL VI+ + ++ +P V + + +S +V L +L + A+ +L Sbjct: 1 MSRLYLLLLVVIAGAALLGMAIAEHPGYVLFAYKGYRFESSLWVFLGLLLVLVAAFFVLR 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + ++ + + +A G +A N A + + + Sbjct: 61 WVVGLIAASAGVVLPWSQRNRNRRARQAALHGQRDLAEGNWQQALHKLTRAAA---TDQQ 117 Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRY 176 LV+ L + A +Y + + L + E A+ L + A Sbjct: 118 PLVHYLGAARAANELGEYAQSDDLLRQAREREPKAEVAI-GLTQARLLIDRSEYRQALGV 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSR---AITFLNQKKKNAKEWNRNRAILLIARS 233 + + P P+ + + YV ++W + L +++ + L A + Sbjct: 177 LQQLNEDHPQQPYTLSLLQKLYVQLQDWPALCRLLPVLRKRRVLPADKLNGLEHLAWAAA 236 Query: 234 LENADKGDMIASYHD----------AIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 LE KG++ SL+ + + A + L ++++ AE +L Sbjct: 237 LEQIGKGELKEGETARSLVTGCWSQIPSSLQHDPDLLYAYATRLRELDAEDE---AEAVL 293 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K + +A +Y + S + +L A L E L+ + +++L D+ Sbjct: 294 RAALKQHYEGRLAYLYGQVRSSDPARQLNLAHSLLEKQPNDPLLLLTLGRLSLVNEQFDK 353 Query: 344 AHAKAMLAMKIAPRKEIF----LLLAQIEQANSHN 374 A ++ ++ E LLAQ+ + N Sbjct: 354 AREYLEASLALSRSAETCAELARLLAQLGETEHSN 388 >gi|238765352|ref|ZP_04626277.1| hypothetical protein ykris0001_16940 [Yersinia kristensenii ATCC 33638] gi|238696439|gb|EEP89231.1| hypothetical protein ykris0001_16940 [Yersinia kristensenii ATCC 33638] Length = 399 Score = 73.4 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 55/366 (15%), Positives = 118/366 (32%), Gaps = 9/366 (2%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L L A++++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARKQTRAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADTEQLPVNITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-----ENADKGDMIASYHDAIESLK 254 + +S + L A+ L ++ + + + + Sbjct: 199 RSGAYSSLLEIL-PAMSKAQVHTAEEIAALEQQAYIGIMNQCMAEEGSDGLKRWWKDQSR 257 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I + A+ LI + A+ I+ K + + L S N K Sbjct: 258 KVRHEIPLQVALAEHLIECDDSDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPLEKSL 317 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 318 RQHIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALAQRPDGYDYAWLADALDKLHRP 377 Query: 375 TDKILY 380 D Sbjct: 378 EDAAQA 383 >gi|297516669|ref|ZP_06935055.1| putative protoheme IX biogenesis protein [Escherichia coli OP50] Length = 216 Score = 73.4 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 64/205 (31%), Gaps = 17/205 (8%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMAKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKN 217 Q Y+ WS + + K Sbjct: 192 LAEQAYIRTGAWSSLLDIIPSMAKA 216 >gi|90581039|ref|ZP_01236839.1| hypothetical HemY protein [Vibrio angustum S14] gi|90437735|gb|EAS62926.1| hypothetical HemY protein [Vibrio angustum S14] Length = 396 Score = 73.4 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 53/393 (13%), Positives = 129/393 (32%), Gaps = 11/393 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++L+ + I ++ V I+ N+ S ++ ++ ++LL Sbjct: 1 MIKLLLLVLALIAGIIVGPELAGNQGYVLISTANQTIEMSLTTLVVLIVALFAVFLLLEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + S + R K GL+ + + A K+ + ++ Sbjct: 61 ILKRVFSISSSTRGWFSGRKVRKARIQTSAGLLKVTEGDWKPAEKLLTKSAK--FSDAPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L YL + A + E L+ ++ + + R A + Sbjct: 119 LNYLAAAEAAQGLGKTEQRDEYLKQAAELDSQNLAVALTRAKLQIRQQQFEQALATLQEV 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS----LEN 236 P V + + Y+ ++W +T L Q K A+ L ++ +++ Sbjct: 179 QQDHARNPIVLGLLQECYLKLEDWKSLLTLLPQLTKAGVISQ-EEAVALDEQAQCGQMQH 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + + ++ D A C K +++++ A IL K + + Sbjct: 238 LGQQNGTDGLVGYWNNMGRKDKQNPALVACFIKQMMARHADSDAYPILRDALKKSQDERL 297 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ L + + + L + + + + ++ + G+ +A A+ + Sbjct: 298 ISLVPQLNLPDRHPAIVKLQELLRQDGNNAVTHSALGQMLMAEGNWQEAKEHFERAVAVR 357 Query: 356 PRKEIFL-LLAQIEQAN--SHNTDKILYWTQSA 385 P + L+A +EQ + + A Sbjct: 358 PDMTDYAHLVATLEQLDDKQGAAAASRQALELA 390 >gi|95931033|ref|ZP_01313761.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95132929|gb|EAT14600.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 451 Score = 73.4 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 63/437 (14%), Positives = 138/437 (31%), Gaps = 31/437 (7%) Query: 4 LIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVS 62 L+ + V+ + + F+ S P++++I + T P ++ I + +I Sbjct: 3 LMSFLLVVIMFLAFFVFFSGINPQEMTIFFLPDSSVTYPVTVVVIGCILVGLFI---GYG 59 Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALY----TGLMSIAAHNIPLARKMHSYVSQQHTFHN 118 + +K K + G+ + + +I A + ++ Sbjct: 60 FHLYGALTYGMRNWLRGRGEKRNKEIETIYRDGVGRLLSGDIKKAHALLQKAIDKNPNKV 119 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E + L + E A L I ++ L +G+ +SA + Sbjct: 120 ESYIAL--ASVNTQEGNQQGAITLLRKAKSINGKSLEVLFKLAATYEDLGEDDSACKEIE 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIAR--- 232 + L++ D A+ ++ + W +A+ + K NR + LL R Sbjct: 178 EILELEKDNRKAIRALRDLHMKHQRWEQALELQKRLLKAGPSGNRIQEEKEKLLSIRYEV 237 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + D + + +K A + + QN A +I + +K Sbjct: 238 ARQKLANNDEDQAISSLKQIIKEAPEFTAARVTLGDAYAQQNNAEDAALIWQDSYKK--- 294 Query: 293 PEIAN-IY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + ++ ++ E+ L + K+ L + +D+A Sbjct: 295 --LGRSVFLSRLENLYIEQEDPQSLLSFYSSALMARSNDLVLRFFYGKLCLRLEMVDEAL 352 Query: 346 AKAMLAMKIAPR-KEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLWISD-DGYLS 402 AP +I LLLA+ + + + Y + ++ D G S Sbjct: 353 EHIYTVESSAPDFPQIHLLLAEAHRRRNRIDEAIGEYQKALGVDNQLSLGYVCDCCGTTS 412 Query: 403 SVWLPLSPISKTLCYFE 419 W+ T + Sbjct: 413 LEWMSRCEQCGTWGSYS 429 >gi|15676677|ref|NP_273821.1| hypothetical protein NMB0779 [Neisseria meningitidis MC58] gi|7226010|gb|AAF41192.1| hypothetical protein NMB0779 [Neisseria meningitidis MC58] gi|316983766|gb|EFV62747.1| tetratricopeptide repeat family protein [Neisseria meningitidis H44/76] gi|325140067|gb|EGC62596.1| hypothetical protein NMBCU385_1351 [Neisseria meningitidis CU385] gi|325200535|gb|ADY95990.1| conserved hypothetical protein [Neisseria meningitidis H44/76] Length = 407 Score = 73.4 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 125/398 (31%), Gaps = 14/398 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P + R K AL ++ A S V N Sbjct: 61 FIIGVLNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLVNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387 + + P L+LA++ E + A+ Sbjct: 358 IALKPSISARLVLAKVFDEIGEPQKAEAQRNLVLEAVS 395 >gi|300714794|ref|YP_003739597.1| protein HemY [Erwinia billingiae Eb661] gi|299060630|emb|CAX57737.1| Protein HemY [Erwinia billingiae Eb661] Length = 396 Score = 73.0 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 122/385 (31%), Gaps = 30/385 (7%) Query: 11 ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70 I+ V+ + ++ + V I N TS + IL L +++ V R L Sbjct: 12 IAGVVLGPM-LAGHQGYVLIQTDNWNIETSVTGLAIILILSLIVILVVEWVLRRLLRTGV 70 Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 R ++ K L+ +A + K+ S + + YLL + A Sbjct: 71 RTRGWFMGRKRNRARKQTNAALVKLAEGDYRQVEKLLSRNADHA--EQPVVNYLLAAEAA 128 Query: 131 LAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +++ LE + + TR + ++A+ + L+ Sbjct: 129 QQRGDEIRSNQHLERAAELAGSDQLPVEITRV-------RIQLARNEDHAARHGVDRLLE 181 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P P V Q YV WS + L +K+ +R L L ++ Sbjct: 182 VAPRHPEVLRLAEQAYVRTGAWSALLDILPAMEKSQVSDEAHRLALQQEAWLGLMNQAMA 241 Query: 243 IAS----YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI----LEKIWKVNPHPE 294 + + N + A LI + A+ I L+K + Sbjct: 242 DQGSDGLKRWWQDQSRKTRNETALQVAMADHLIVCDDHETAQQIVLDGLKKAYDER---- 297 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + L + N K + + + + + ++ ++ G +QA A+K Sbjct: 298 LILLMPRLKTGNPEQLEKALRQQIKQHGATPLLHSTLGQLLMKHGEWEQAAEAFREALKQ 357 Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379 P + LA + Sbjct: 358 RPDAFDYAWLADTLDRQHKPEEAAQ 382 >gi|87118403|ref|ZP_01074302.1| hypothetical protein MED121_15289 [Marinomonas sp. MED121] gi|86166037|gb|EAQ67303.1| hypothetical protein MED121_15289 [Marinomonas sp. MED121] Length = 416 Score = 73.0 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 125/379 (32%), Gaps = 35/379 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M RL + +V + I+ V + +GN TS +V + + LF + Sbjct: 1 MRRLFLIIVSVLIVGGTLGILMKQDTGYVLLAYGNITLETSIWVFSAFILVLLFVLSWVK 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + L + L + + + + GL+ + N A K+ + + Sbjct: 61 RILFASLKPGSSLAKLTGNLHQKRASRNTIRGLLELVGGNWSKAEKLLTKSASN--VPYP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + ++ A + + L E P ++ R G SA Sbjct: 119 LINHIAAAYAASEQDNNERSKTLLREAHRSSPEAEFAISFAQSQIQMRQGHFESALATLL 178 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITF-----------------LNQKKKNAKEW 221 + I P V + +VQ Y ++W + L +K NA Sbjct: 179 RLHKIQPKHRQVLKMLVQAYSHLEDWQALLNLTPLLKKEGILNDSNMLDLEKKAFNALLE 238 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE- 280 + + L + D + D +E + I AK+++ + KAE Sbjct: 239 HFSHKSLQGHSHSDILKTIDTVWQKLDGLEDDENM------RITYAKAMLEFGDESKAES 292 Query: 281 ---VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L K+W + +Y + +N L++A +K+S E L+ +++ Sbjct: 293 FIRKCLNKLWSDQ----LVLVYGQIEHKNAKKALQQAESWLSKHKDSAELLLTCGRLSQM 348 Query: 338 MGSIDQAHAKAMLAMKIAP 356 + +A ++ + P Sbjct: 349 LQLWGKARDYYQSSIDLQP 367 >gi|73540051|ref|YP_294571.1| TPR repeat-containing protein [Ralstonia eutropha JMP134] gi|72117464|gb|AAZ59727.1| TPR repeat [Ralstonia eutropha JMP134] Length = 616 Score = 73.0 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 88/258 (34%), Gaps = 47/258 (18%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL- 228 A A DI+P +P + + VL WS A L+Q+ + +R +IL Sbjct: 126 PQQALDAARLWADIAPASPAARQVLSTLLVLNGRWSEARPLLSQQLSSVPANHRGESILQ 185 Query: 229 -------------------------------LIARSLENADKGDMIASYHDAIESLKLCD 257 +A + G+ + E+L+L Sbjct: 186 LQQQMSRTSDPAGAATLLQDLTRDDTRLPETHLAIARAQEIAGNTPGALSALDEALRLRP 245 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 + A++ A+ L ++++ KA L + +P H +A +Y + ++ + + Sbjct: 246 DFEPAALMVAE-LRAEDEPDKAIAGLRRFLDKSPRSVNGHITLARLYL-MRNDMPAAR-Q 302 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE---IFLLLAQ 366 L ++ + + +L+ +A +++A P F LAQ Sbjct: 303 EFETLRKVAPADPRVPLALGLTSLQAKEYGEAEQYLKEYLQLAAKVPTANPDIAFQYLAQ 362 Query: 367 IEQANSHNTDKILYWTQS 384 I + + + W + Sbjct: 363 IAE-ERKDYAGAIQWLER 379 >gi|94501429|ref|ZP_01307948.1| uncharacterized enzyme of heme biosynthesis [Oceanobacter sp. RED65] gi|94426394|gb|EAT11383.1| uncharacterized enzyme of heme biosynthesis [Oceanobacter sp. RED65] Length = 411 Score = 72.7 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 14/205 (6%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 + I++ N + TS +V + L + A + + L P+ L +R + Sbjct: 27 GYILISFQNWVIETSLWVFILSLLASVLAIYGVIHLINNLLKTPSTLQDWRGRRGINVAI 86 Query: 86 KALYTGLMSIAAHNIPLARK--MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GL+++A A K M + + YL + A Y + E + Sbjct: 87 AKTVRGLIALAEGQWQQAEKYLMAGAKGKGKIIN-----YLAAARAAQYRGDYEHSDELI 141 Query: 144 EMMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 +T+ + + R A + P +V + +++ Y Sbjct: 142 AQ--ATKSTKGADLAVGLQHAQLQIERE-QYEQALATCLRLKKQFPKHQFVNKMLLKAYT 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRN 224 +W + L Q K+ + Sbjct: 199 ALDDWQAVLDILPQLNKHKILPTKK 223 >gi|325576795|ref|ZP_08147410.1| HemY protein [Haemophilus parainfluenzae ATCC 33392] gi|325161001|gb|EGC73119.1| HemY protein [Haemophilus parainfluenzae ATCC 33392] Length = 428 Score = 72.7 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 11/169 (6%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R++ + + L +S V I N +Y S ++ L L Sbjct: 1 MFRVL-FLMIALLAGLIAGPYLSGQQGYVRIETANTIYEMSLTTLVIFFVVALAIIYTLE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + F + ++ +R K + GLM + + A K+ ++ E Sbjct: 60 WIVTRFFRLSSNTYNWFSRRKRVKAQRQTLEGLMKMNEGDYAKAEKLIGKNAKHSA---E 116 Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 ++ L++ + A A+ L I AT +L E R Sbjct: 117 PVLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIART 160 >gi|170718233|ref|YP_001785254.1| HemY protein [Haemophilus somnus 2336] gi|168826362|gb|ACA31733.1| HemY protein [Haemophilus somnus 2336] Length = 425 Score = 72.7 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 102/331 (30%), Gaps = 53/331 (16%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ V+ + +S V I + S +++ + L+ Sbjct: 1 MFRVLFLMLVLLAGLIGGPYLSGKQGYVLIQTASYNIEMSITMLVIFFVILMAIVYLIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V F + +R K + GL+ + + A K+ ++ Sbjct: 61 VVTRFFRLSNNTYSWFSRRKRVKAQRQTLEGLVKMNEGDYFKAEKLIGKNARH--SDKPI 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQ 174 L + + A +A+ L I AT SL E + L +A+ Sbjct: 119 LNLIKAAEAAQQRGDDFVANRYL-----IEATELAGTDSLIVEIARTRILLQQNKLPAAR 173 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEW-----------------SRAITFLNQKKKN 217 L+++ V + V+ Y+ + + S T L +K ++ Sbjct: 174 SSVDSLLEMTSRNKEVLKLAVKIYLKSAAFHALDKILDQIEKVGLYSSDEFTALQRKVED 233 Query: 218 A---------------------KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 RN + + D D ++Y AI++LK Sbjct: 234 GLLDEKMNEEGVDGLLRWWDEQPRKRRNDLYVKVGLIRRLLDSDDHESAYELAIDALKKV 293 Query: 257 DNSIMASICAAKSLISQ--NKKRKAEVILEK 285 +NS+ A++ + K +LEK Sbjct: 294 ENSVEANVALCTQITRLQPEDNSKLLKLLEK 324 >gi|167031232|ref|YP_001666463.1| HemY domain-containing protein [Pseudomonas putida GB-1] gi|166857720|gb|ABY96127.1| HemY domain protein [Pseudomonas putida GB-1] Length = 412 Score = 72.7 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 127/365 (34%), Gaps = 14/365 (3%) Query: 19 IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78 I V+ + V I++G Y++ + L+ L + LL + L+ ++ + Sbjct: 20 IAVAKHSGYVLISYGGFRYQSGLWAALAGLLAVVALLWLLRYLVGLVLTSSGVVNPWSRR 79 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 + A+ G + +A A++ +H + L YL + A + + Sbjct: 80 NRSRRIRVAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRTE 136 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + LE L+ E A+ + + G+ + A + P V + + Sbjct: 137 DSDNLLERALERQPQAELAIALTHAQLQMDRGETDGALETLLAMQERHPHNSQVLRLLQR 196 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248 Y+ +WS I L +K A L L + D + Sbjct: 197 LYLERGDWSALIRLLPDLRKGKVLPPAELAALEQRAWGQNLSLATTRGEDAQTARQALER 256 Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 A + L + A A+ L + +AE +L K +A +Y + ++ Sbjct: 257 AWQQLTAAQRQEPQLVLAYAEQLRQVGAQSEAEHVLRTALKREYESHLARLYGLVRGDDP 316 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L+ A + + + L+ + +++L+ +A ++++ E LA++ Sbjct: 317 ARQLQTAEGWLKAHPQDASLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARL 376 Query: 368 EQANS 372 Sbjct: 377 LAGLG 381 >gi|318607649|emb|CBY29147.1| homolog of E. coli HemY protein [Yersinia enterocolitica subsp. palearctica Y11] Length = 399 Score = 72.7 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 58/365 (15%), Positives = 117/365 (32%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L L A++++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDQTPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKL 255 + +S + L K A L I + + + + Sbjct: 199 RSGAYSSLLEILPAMSKVQVHTAEEIAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L S N K Sbjct: 259 VRNEIPLQVALAEHLIECDDSDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPIEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QHIKQHGATPLLNSTLGQLMLKHGEWEKASETFKAALAQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|83749205|ref|ZP_00946207.1| HemY protein [Ralstonia solanacearum UW551] gi|207742666|ref|YP_002259058.1| protein porphyrin biosynthesis [Ralstonia solanacearum IPO1609] gi|83724146|gb|EAP71322.1| HemY protein [Ralstonia solanacearum UW551] gi|206594060|emb|CAQ60987.1| protein porphyrin biosynthesis [Ralstonia solanacearum IPO1609] Length = 397 Score = 72.3 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 55/400 (13%), Positives = 119/400 (29%), Gaps = 18/400 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S V+L+ L A LL Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNVVLAALVLVFVAMHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + + AL + S+ A A ++ Sbjct: 61 LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQVWDV--QRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E A + ++ L ++ D + A Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236 + ++ + K W+ + +K A L + +L Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHAVLAARLKQMACETLLQ 235 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D A E S + AA + +A+ I+E K + + Sbjct: 236 ERRHDTDALNDFWRELTAEERRSPRIASLAALYFAQLGRTDEAKRIVEDALKAHWDGRLI 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + +++A + + + + + + +A + A+K A Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355 Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R L LAQ+ + + ++ QSAL A Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRPEESQRHFRQSALLA 395 >gi|300703403|ref|YP_003745005.1| protoheme ix synthesis protein (hemy) [Ralstonia solanacearum CFBP2957] gi|299071066|emb|CBJ42375.1| putative protoheme IX synthesis protein (hemY) [Ralstonia solanacearum CFBP2957] Length = 397 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 117/400 (29%), Gaps = 18/400 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S +L+ L A LL Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLAALVLVFVAMHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + + AL + S+ A A ++ Sbjct: 61 LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQAWDV--QRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E A + ++ L ++ D + A Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236 + ++ + K W+ + +K A L + +L Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHAVLAARLKQMACETLLQ 235 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D A E S + AA + A+ I+E K + + Sbjct: 236 ERRHDTDALNDFWRELTAEERRSPRIASLAALYFAQLGRTDDAKRIVEDALKAHWDGRLI 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + +++A + + + + + + +A + A+K A Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355 Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R L LAQ+ + + ++ QSAL A Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRPEESQRHFRQSALLA 395 >gi|88705505|ref|ZP_01103215.1| protein porphyrin [Congregibacter litoralis KT71] gi|88700018|gb|EAQ97127.1| protein porphyrin [Congregibacter litoralis KT71] Length = 411 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 124/372 (33%), Gaps = 22/372 (5%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ V +I + P + I +G TS +V + ++ + ++ Sbjct: 2 LALVAGVGIVALIETE-PGYLLIAYGGYTVETSFWVGILLIATVVLLLYASLRFLHRLIT 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 PA + + +R + + G ++ N +RK + + L YL+ Sbjct: 61 SPANVLNWAGERRLRQSARLTGRGTINFIEGNWAKSRK--QLLRGAKYSESPLLNYLMAA 118 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGD--LNSAQRYATKALDI 183 + + + ++Q + AV + L ++ D A R A Sbjct: 119 RASY---RLQEPEAMSRQLMQAAESDLEAVIAVDLTQAELQLNDRQYEKALRTLETAKKN 175 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN----AKEWNRNRAILLIARSLENADK 239 P V + + Y + + L +K A E + A + + A Sbjct: 176 PGKHPQVLHLLCRVYDGLGDIEAMLDLLPLLRKYRIGGALELDDLEAKIHHDLLEQAAVT 235 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK----RKAEVILEKIWKVNPHPEI 295 GD + + + +L+ ++ R+ E L+K WK P + Sbjct: 236 GDTELLKSRWKKYPGRLVDEESVQLHYLSALLRCDEVTIVEREIERRLKKNWK----PAL 291 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++Y + E +L A + + E L+ + ++A+ +A + Sbjct: 292 VSLYGRINRETAQKQLATAETWLRKHDKDPELLLCLGRLAMVERQWAKARDYLERSYAAN 351 Query: 356 PRKEIFLLLAQI 367 +E L L ++ Sbjct: 352 ASEEACLELGRL 363 >gi|134094244|ref|YP_001099319.1| hypothetical protein HEAR1010 [Herminiimonas arsenicoxydans] gi|133738147|emb|CAL61192.1| Putative protoheme IX synthesis protein (HemY) fused with Protein prenyltransferase [Herminiimonas arsenicoxydans] Length = 398 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 114/397 (28%), Gaps = 31/397 (7%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R+ + + +V+ P +V + S L + F L+ Sbjct: 1 MRIFLWLIALFATAIGLAVVARFNPGNVVFFYPPYRIDLSLNFFLLLAVLLFFLIYLVLK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P + ++ KG +AL L + R H+ + + Sbjct: 61 TLRVAQGMPGRVAAYRREKRERKGNQALRESLKAYFEG-----RFGHAEKAAMRATESPE 115 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD---LNSAQRYA 177 L + A A + + + + + L + D A Sbjct: 116 NAGLAALIAARAAHRMQQTERRDTWLATVEEDQTLKTARLMTAIELLVDERQPELALDVV 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + ++ A W + + KN ++ L Sbjct: 176 KELNANGTRHIHALRMALKANQRAGNWPEVLRLVRTLDKNNALHP------ALSSRLREL 229 Query: 238 DKGDMIASYHDAIESLKLCDNSIMA--------SICAAKSLISQNKKRKAEVILEKIWKV 289 D++ + + E+++ SI A + AA++ + + +A I+EK Sbjct: 230 AYQDLLKNPSNDEEAIRNVWLSIPAEDRIKPFVAAHAAEAFTKRGLQDEARAIVEKALAA 289 Query: 290 NPHPEIANIYTHLLSENTVGKL----KRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + Y L +R + + E + + + L +A Sbjct: 290 EWDDRLLRAYRAAAGAEGTPALLGQIERCEEWVKKHPADPELALTLGTLCLRQNLWGKAQ 349 Query: 346 AKAMLAMKIAPRKEIF----LLLAQIEQANSHNTDKI 378 + A+ A + L LAQ+ +A +H + Sbjct: 350 RQLEQALSDASGARMLQEVHLKLAQLHEALNHTEEAA 386 >gi|110835180|ref|YP_694039.1| hemY protein [Alcanivorax borkumensis SK2] gi|110648291|emb|CAL17767.1| hemY protein [Alcanivorax borkumensis SK2] Length = 410 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 45/382 (11%), Positives = 116/382 (30%), Gaps = 21/382 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 L+ +++ + ++ V I T+ ++ + A ++L + Sbjct: 6 LLIIIALVAALALG-RWMAADSGYVLIIRDTMSVDTTLGFVVLMALLGAVALVVLTLLGN 64 Query: 64 FFLSC--PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121 + P ++ ++ L +G + + + A ++ + ++ + Sbjct: 65 TAWNLMEPVRATRRWKRKVAERR---LRSGFLQLVDGELEKAERLLAAAGEE--GDWPLV 119 Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYATK 179 +LL + A + + +++ + LE R A L + G A+ Sbjct: 120 AWLLAAEAAQEQDKVDVSQQYLEQASADRRGRLVA--GLMKARFALDDGHPEQARSELKV 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWS---RAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 D++P + + K+W + L + + R R L Sbjct: 178 LADMAPRNKRILNTYAEVLERQKDWQTLCGLMPRLKRAFGENDQARRERKAWLAWLQETA 237 Query: 237 ADKG--DMIASYHDAIESLKLCDNSI---MASICA-AKSLISQNKKRKAEVILEKIWKVN 290 G D + + + K + A + A L R A ++ + Sbjct: 238 RKPGFNDADSRREELRKLWKDVPVRLKNDPAMVARYAGFLAQLGGGRGALNLVREQLDSQ 297 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + + + + L+ + + L+ ++AL+ +A Sbjct: 298 WDDRLPPVLEAIDDISPDDLLQVLEKWLVERPGNAAVLITAGRVALKARLWGKAQGFFEA 357 Query: 351 AMKIAPRKEIFLLLAQIEQANS 372 A + LA++ +A Sbjct: 358 AANSSQSATALAELARLYRALG 379 >gi|330444904|ref|ZP_08308559.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489214|dbj|GAA03056.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 394 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 129/393 (32%), Gaps = 11/393 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++L+ + I ++ V I+ N+ S ++ ++ ++LL Sbjct: 1 MIKLLLLVIALIAGIVVGPEIAGNQGYVLISAANQTIEMSLTTLIILIVALFAVFLLLEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + S + R K GL+ + N A K+ + ++ Sbjct: 61 ILKRLFSLGSSTRGWFSGRKVRKARIQTSEGLLKVTEGNWKPAEKLLAKSAK--YSDAPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L YL + A + E L+ ++ + + R A + Sbjct: 119 LNYLAAAEAAQGLGKTEQRDEYLKQAAELDSQNLAVALTRAKLQIRQQQFEQALATLQEV 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS----LEN 236 P V + + Y+ ++W +++ L + A A L R+ +++ Sbjct: 179 QQEHARNPIVLGLLQECYLKLEDW-KSLLTLIPQLTKAGVITAEEATALDERAQCGQMQH 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + + ++ D A C K +++++ A +L K + + Sbjct: 238 LGQQNGTDGLVGYWNNMGRKDKQNPALVACFIKQMMARHADNDAYPVLRDALKKSQDERL 297 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ L + + + L + + + + ++ + G+ +A A+ + Sbjct: 298 ISLVPQLNLPDRHPAIVKLQELLRQDGNNAATHSALGQMLMAEGNWQEAKDHFEKAVAVR 357 Query: 356 PRKEIFL-LLAQIEQAN--SHNTDKILYWTQSA 385 P + L+A +EQ + + A Sbjct: 358 PDMTDYAHLVATLEQLDDKQGAAAASRQALELA 390 >gi|238028330|ref|YP_002912561.1| HemY domain-containing protein [Burkholderia glumae BGR1] gi|237877524|gb|ACR29857.1| HemY domain protein [Burkholderia glumae BGR1] Length = 398 Score = 71.9 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 132/398 (33%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPED-VSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ V + V + V I + S + + + L Sbjct: 5 LRGILWLAVLFAVAVALATVGRFDGGQVLIVYPPYRVDVSLNLFIVAIVVLFVVLYALLR 64 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K + +L + ++ A A K N+ Sbjct: 65 IVRNVWRMPQRVAAYRARMRREKAHASLRDAIANLYAGRFSRAEKAARDALAVDA--NQG 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ A +Y E L + R A + E+ D A Sbjct: 123 AASLVGAVAAHRMHEYARRDEWLAKVDGNDWQEARLLATAEMRAEAR---DAEGALAALA 179 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K W+ + L + + + + A+ + ++ E+ Sbjct: 180 EMQQSGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRMRQQAAEHLL 238 Query: 238 -DKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D+ + + +SL + + AA+ L++ +++ +A I+E + Sbjct: 239 RDRRHDADALLEVWQSLSAPERQSPRL---ADLAAELLVALDRQPEARRIVEDALAHHWD 295 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y +S + + +++A + + + L+ + ++ + +A + A+ Sbjct: 296 ARLLRRYPDTVSGDALPLIQKAEGWRRDHADDADLLMALGRLCQKQQLWGKAQSFLEAAL 355 Query: 353 KIAPR----KEIFLLLAQIEQANSHNTDKILYWTQSAL 386 K++ LA + + ++ +SAL Sbjct: 356 KLSDNDALKVRAHRALASLFEHLGDTDKAARHYRESAL 393 >gi|209693829|ref|YP_002261757.1| protein HemY [Aliivibrio salmonicida LFI1238] gi|208007780|emb|CAQ77902.1| protein HemY [Aliivibrio salmonicida LFI1238] Length = 393 Score = 71.9 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 52/387 (13%), Positives = 113/387 (29%), Gaps = 16/387 (4%) Query: 1 MLRLIRY-FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+RL+ ++ +I + V I+ S ++ + + LL Sbjct: 1 MIRLLLLAIVLVGGLIVGTT-FADQQGYVLISVAEITIEMSLTTLVLFIGALIAGLFLLE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V + LS R+ K + G++ + A ++ + + + F Sbjct: 60 IVVKRILSVSNFTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAERLITKGGRHNDF--- 116 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYA 177 L+ L A RQ+ + + AV +L R A Sbjct: 117 PLLNYLAAAEAAQGRQHIEQRDAYLKLASEQPGSHLAV-ALTSAKLQMREEQYEFALATL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR----- 232 P P + + + Y+ EW +A+ + +A+ L + Sbjct: 176 QSVNVDYPHNPVLLDLLKDCYLALNEW-QALKNIIHPLTKGNLITEQQALELEEKVECGI 234 Query: 233 -SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L +KG K I +C + L ++ +A ++L K Sbjct: 235 LALIATNKG-TTGLLDHWQSLPKKLKKHIPILVCLIRQLHNRKADSEAYILLRDNLKKRN 293 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + L + L + + ++++ + A A Sbjct: 294 DDRLIELLPTLNLPDYHPATVLLEDLARYDIRNPIIQSTLAQLYMRTQKWQPAREHFEAA 353 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKI 378 + I + LA++ + Sbjct: 354 LAIREDMSDYAYLARVLDKQNRKQAAA 380 >gi|291612742|ref|YP_003522899.1| HemY domain protein [Sideroxydans lithotrophicus ES-1] gi|291582854|gb|ADE10512.1| HemY domain protein [Sideroxydans lithotrophicus ES-1] Length = 386 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 130/397 (32%), Gaps = 40/397 (10%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61 +R + +F + + ++V+ P V + S IL +L + Sbjct: 1 MRWLFWFLGLFAAAVAVMLVARNPGYVQFVYPPYRLEVSLTFFALILLAAFGLGYILLRL 60 Query: 62 SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121 + L+ PA + + +R +KG A+ L + A + V L Sbjct: 61 TFVTLNLPAYVRNFRAERAANKGRTAMIEALRAYF--EGRFAAAEKAAVRAMELGEKSGL 118 Query: 122 VYLLEVQIA--LAERQYNIA-----------HEKLEMMLQIPATREFAVYSLYFESCRIG 168 ++ + A L + A + +M + T L + Sbjct: 119 NSIVAARAAHELRQFDRRDAYLADAEGKTVGETTMRLMAK---TEF-----LLDQKQPQS 170 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 LNS + + + ++ A+ W + + Q +K Sbjct: 171 ALNSLKELSDSGMH---KHIGALSLELKAQQQARNWDAVLEVMAQLEKRNAIDK------ 221 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIM--------ASICAAKSLISQNKKRKAE 280 +A L + + S I +L+ SI + AA+S + A+ Sbjct: 222 AVASQLRQQAWLEKLRSQATDINALRSMWKSIPGEFKRRSKIAAAAAESFSKLGDCKSAQ 281 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +L + N E+ +Y +EN ++++A + + + L+ + K+ + Sbjct: 282 QLLAESLNANWDSELVALYGECHNENNTAQIEQAESWLKQHTDDPGLLLALGKLCMHQQL 341 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 +A + ++ + +E + L Q+ + + + Sbjct: 342 WGKAQSYLDASLSLEASREAYATLGQLAEKMGKHEEA 378 >gi|225075722|ref|ZP_03718921.1| hypothetical protein NEIFLAOT_00738 [Neisseria flavescens NRL30031/H210] gi|224952993|gb|EEG34202.1| hypothetical protein NEIFLAOT_00738 [Neisseria flavescens NRL30031/H210] Length = 407 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 53/383 (13%), Positives = 126/383 (32%), Gaps = 26/383 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y +V + + R + + L +F L Sbjct: 1 MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58 Query: 61 VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116 +F PA + R + +L + ++ A + + V Q Sbjct: 59 -IKFVFGLLNIPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEAAKVLQNKEAG 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175 N L +L A + + L + +P ++ + + L E + D +A + Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALSRRDYPTAAQ 177 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233 A I+ + + ++ + S + + K ++ + R Sbjct: 178 NLEAAAKINSNLSRLVRLQLRYAFDHGDASDVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237 Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L E D G + A ES+K LC + A+ A ++ + Sbjct: 238 LLSEVTDAGSLKACLKHIPESMKSGELC-------VAIAEKYERLGLYADAVKWVKTHYP 290 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344 PE+ + + + + ++A+ L + ++ L+ + ++A +A Sbjct: 291 QTRQPELLEAFVESVRFLSEREQQKAIDLADSWLQEQPDNAPLLMYLGQLAYGRKLWGKA 350 Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367 ++ + P L+LA++ Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373 >gi|207723610|ref|YP_002254008.1| protein porphyrin biosynthesis [Ralstonia solanacearum MolK2] gi|206588813|emb|CAQ35775.1| protein porphyrin biosynthesis [Ralstonia solanacearum MolK2] Length = 397 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 118/400 (29%), Gaps = 18/400 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S +L+ L A LL Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLAALVLVFVAMHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + + AL + S+ A A ++ Sbjct: 61 LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQVWDV--QRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E A + ++ L ++ D + A Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236 + ++ + K W+ + +K A L + +L Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHAVLAARLKQMACETLLQ 235 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D A E S + AA + +A+ I+E K + + Sbjct: 236 ERRHDTDALNDFWRELTAEERRSPRIASLAALYFAQLGRTDEAKRIVEDALKAHWDGRLI 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + +++A + + + + + + +A + A+K A Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355 Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R L LAQ+ + + ++ QSAL A Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRPEESQRHFRQSALLA 395 >gi|291615712|ref|YP_003518454.1| HemY [Pantoea ananatis LMG 20103] gi|291150742|gb|ADD75326.1| HemY [Pantoea ananatis LMG 20103] Length = 398 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 119/391 (30%), Gaps = 21/391 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML++ F ++ I +++ + V I N TS + IL L + + Sbjct: 1 MLKVFILFVLLIAGIVLGPMIAGHQGYVLIQTDNWNVETSVTGLAIILIISLLVILAVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R A R + + LM +A + K+ S +H Sbjct: 61 ILRRLFRTGARTRGWFTGRKRRRAQRHTQNALMKLAEGDFRQVEKLLSK-DAEHA-DVPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172 YLL + A A++ LE + + TR + ++ Sbjct: 119 ANYLLAAEAAQQRGDEMRANQHLERAAELAGNDVIPVEITRT-------RIQLARHEDHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ + L+++P P V Q YV WS + L +K+ R +L Sbjct: 172 ARHSIDRLLEVAPRHPEVLRLAEQAYVRTSAWSALLDILPAMEKSEVGTEEQRTLLQQQA 231 Query: 233 SLENADKGDMIAS----YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L ++ + + + LI + A+ IL K Sbjct: 232 WLGLMNQAMADQGSEGLKRWWGNLSRKTRHETSLQVAMIDHLIECDDHDTAQDILLDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + + + S N K + + + + + ++ + G QA Sbjct: 292 RHYDDRLVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAAEAL 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+ P + LA + + Sbjct: 352 QQALAQRPDAFDYAWLADVYDRLRRPEEAAK 382 >gi|254447552|ref|ZP_05061018.1| HemY domain protein [gamma proteobacterium HTCC5015] gi|198262895|gb|EDY87174.1| HemY domain protein [gamma proteobacterium HTCC5015] Length = 395 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 127/375 (33%), Gaps = 18/375 (4%) Query: 15 ICSFIIVSHYPEDVSITWGNRLYRT-SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLF 73 I +++ I+ G + V+L + + L ++R P Sbjct: 15 IALAWTLANLDGYFLISLGGWQIENDNLIVLLILALLLFSVFWLALRIARTAWKLPDNFA 74 Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 KR +K+L GL+ + A ++ L YL + A + Sbjct: 75 AYSEKRRQAAAHKSLSQGLIDLI--ECRWASAEKQLLAHIDYSETPLLNYLGASRAAAQQ 132 Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWV 190 + + L+ + + A+ L ++ A ++ I+P +V Sbjct: 133 NAFERRDQYLKAAHESDGKADVAI--LLTQADLQLSHQQTEQALATLSRLRQIAPRHGYV 190 Query: 191 TEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARS--LENADKGDMIASYH 247 + + + + +EW + A KK + + ++ L LE+A K + S Sbjct: 191 LKLLSRLHHQLREWDKLARILPELKKSDVLTPEQLESLQLDTYKGMLEDAAKNRVDQSLG 250 Query: 248 DAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 DA + L+ + + A +L+SQ ++AE ++ + + +Y L Sbjct: 251 DAWSSLPKVLRKDNRLV---AVYANALVSQGDHQQAEKLIRSTLVKHWDENLVRLYGQLD 307 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 N L+ S L+ +++I ++ AM +AP EI Sbjct: 308 VPNNSKLLEHCDAWLSQQPNSPALLLALARINRREELWGRSEEYYRKAMHLAPDAEICAE 367 Query: 364 LAQIEQANSHNTDKI 378 L + +++ Sbjct: 368 LGDMLDKLGRSSEAA 382 >gi|323500168|ref|ZP_08105113.1| heme biosynthesis protein [Vibrio sinaloensis DSM 21326] gi|323314797|gb|EGA67863.1| heme biosynthesis protein [Vibrio sinaloensis DSM 21326] Length = 392 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 125/383 (32%), Gaps = 20/383 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R+I F V+ + + S V I+ ++ S ++ + L A L Sbjct: 1 MFRIIFLFVVLGAGLFAGTQFSGQQGYVLISIADKTIEMSVTTLVIFVIAALAALFALEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L + ++ R + + G++ + + A K + + H Sbjct: 61 LIKKALYASSATWNYFSVRKMRRSRRYTNEGIVKLLEGDFQQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYA 177 L YL+ + A ++ + + AV + R D NSA Sbjct: 119 LCYLVASEAAQGLGDKEK-RDRYLELASQQENAQLAVELTR--AKQQVREADFNSAFDTL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + P+ V + Y+ K W + L AK ++ + L R+ Sbjct: 176 STLKSSYPNNTIVLNLLKTVYMELKLWQPLLDAL-PNLVKAKVVSKQEQVELTLRAQCGL 234 Query: 238 DKGDMIASYHDAIESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + S K + + C AK LI++ +A ++++ K Sbjct: 235 LADVAEQKGSEGLISHWNGLPRKLKNDSHLVE---CFAKQLIARKADSEAFTLVKENIKK 291 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +P+ E+ + + ++ + + + + +++ L +A Sbjct: 292 HPNSELYALLPEMNLADSHPAIVFLEDALRKDGNNAAAHSALAQFHLRDEKWTEAQQHFE 351 Query: 350 LAMKIAPRKEIFLLLAQIEQANS 372 A+ + + LA + + Sbjct: 352 KALSVRSDVSDYAYLADALEKQN 374 >gi|256821391|ref|YP_003145354.1| HemY domain-containing protein [Kangiella koreensis DSM 16069] gi|256794930|gb|ACV25586.1| HemY domain protein [Kangiella koreensis DSM 16069] Length = 408 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 109/315 (34%), Gaps = 17/315 (5%) Query: 62 SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121 R+ L + + RN K + G++++A + A K+ + +Q N L Sbjct: 62 IRYLLRTSNLTLNWFGDRNLRKARQNTIDGMIALAEGHWKTAEKLLAKGAQIR---NTKL 118 Query: 122 VYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYAT 178 + L + A + L + + + A+ L + A + Sbjct: 119 INYLAAARAAQEQGNDKGRDHYLHIAAKTQPDAQVAI-GLTQAQLQMQHKQYEQALATLS 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 DISP P+V + + Q Y +W I L + +KN + + I Sbjct: 178 HLRDISPHHPYVLKLLYQLYARLNDWQHVIDILPKLRKNRVFESSELNTIEILAWNHQLQ 237 Query: 239 KGDMIASYHDAIE-------SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 K A++ E L+ + ++L + ++ EV+++ K Sbjct: 238 KQAETANFDKLSEFWSSIPNHLRKSPEL---ELTYGRALAQLQQDQELEVLVKDSVKHQW 294 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+ ++ + + L A + + L + K+AL+ +A + + Sbjct: 295 QDELIQLFGDIDTPQPDKTLAYAEGWLKQKPHNAVLLATLGKLALKAQLWGKAKSYLEQS 354 Query: 352 MKIAPRKEIFLLLAQ 366 + I P E LAQ Sbjct: 355 LAIIPSAEAHYYLAQ 369 >gi|327395977|dbj|BAK13399.1| protein HemY [Pantoea ananatis AJ13355] Length = 385 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 119/391 (30%), Gaps = 21/391 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML++ F ++ I +++ + V I N TS + IL L + + Sbjct: 1 MLKVFILFVLLIAGIVLGPMIAGHQGYVLIQTDNWNVETSVTGLSIILIISLLVILAVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R A R + + LM +A + K+ S +H Sbjct: 61 ILRRLFRTGARTRGWFTGRKRRRAQRHTQNALMKLAEGDFRQVEKLLSK-DAEHA-DVPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172 YLL + A A++ LE + + TR + ++ Sbjct: 119 ANYLLAAEAAQQRGDEMRANQHLERAAELAGNDVIPVEITRT-------RIQLARHEDHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ + L+++P P V Q YV WS + L +K+ R +L Sbjct: 172 ARHSIDRLLEVAPRHPEVLRLAEQAYVRTSAWSALLDILPAMEKSEVGTEEQRTLLQQQA 231 Query: 233 SLENADKGDMIAS----YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L ++ + + + LI + A+ IL K Sbjct: 232 WLGLMNQAMADQGSEGLKRWWGNLSRKTRHETSLQVAMIDHLIECDDHDTAQDILLDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + + + S N K + + + + + ++ + G QA Sbjct: 292 RHYDDRLVLLMPRIKSGNPEALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAAEAL 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+ P + LA + + Sbjct: 352 QQALAQRPDAFDYAWLADVYDRLRRPEEAAK 382 >gi|158522429|ref|YP_001530299.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511255|gb|ABW68222.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 827 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 66/390 (16%), Positives = 122/390 (31%), Gaps = 36/390 (9%) Query: 27 DVSITWGNRLYRTSPFVILSILYF-------------FLFAWILLFAVSRF----FLSCP 69 +++ + +R Y S FV+ ++++ FL A ++F F + Sbjct: 350 GLALVFEHRTYLPSVFVVAALVWAAITYIRHRPLVIGFLCAVTMIFGCWTFQRNTIWADD 409 Query: 70 AMLFHMLHKR--NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 L+ + ++ N + + L GL A M++ + + L Sbjct: 410 TALWRDVTEKSPNLARPWNNL--GLALKNQGQTDQAMAMYNRAIEIDPGYIHPYNNL--- 464 Query: 128 QIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 E Q A LE ++ A +L R+GD +A + K L ISP+ Sbjct: 465 GALFLETGQPEKARPLLEKAIETDPLFMMAYSNLAIACHRLGDSEAAMAWCEKGLQISPN 524 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + + A + + + L + + D+ A Sbjct: 525 DLEIQNTLGVILLAQRREQEAAVLFEAVLQ-KDPGHTEALMNLALIADKQGDREKTAALL 583 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301 AI +L S A + L A LE+ + P H + N++ Sbjct: 584 EKAI---RLDPASAEARYHLGELLARTGNPDNAMAQLEQALHLKPDHALAHNAMGNLW-- 638 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L + T + + I+ + ++ + G ID A P Sbjct: 639 LQAGKTDRAIDHYQKAIAIDPGFAAAHTNLADALVRTGKIDSALHYLETVAASRPDDAGL 698 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LL I + N Q AL P Sbjct: 699 LLKTGILHQQNGNLPAAENLYQKALSIDPG 728 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 54/196 (27%), Gaps = 6/196 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + N A M H + L + + L + + A + + + I Sbjct: 601 GELLARTGNPDNA--MAQLEQALHLKPDHALAHNAMGNLWLQAGKTDRAIDHYQKAIAID 658 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A +L R G ++SA Y PD + + A Sbjct: 659 PGFAAAHTNLADALVRTGKIDSALHYLETVAASRPDDAGLLLKTGILHQQNGNLPAAENL 718 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + L + +A G + + E L ++ + A Sbjct: 719 YQKALSIDP----GCTACLNRLGMIHAQAGRLDKAAGCFEELALLVPDNPVIHYNLACLY 774 Query: 271 ISQNKKRKAEVILEKI 286 QN+ A L+K Sbjct: 775 ARQNEVEPALTNLKKA 790 >gi|59800805|ref|YP_207517.1| hypothetical protein NGO0361 [Neisseria gonorrhoeae FA 1090] gi|194098095|ref|YP_002001143.1| HemY protein [Neisseria gonorrhoeae NCCP11945] gi|240013677|ref|ZP_04720590.1| HemY protein [Neisseria gonorrhoeae DGI18] gi|240016116|ref|ZP_04722656.1| HemY protein [Neisseria gonorrhoeae FA6140] gi|240117496|ref|ZP_04731558.1| HemY protein [Neisseria gonorrhoeae PID1] gi|240120746|ref|ZP_04733708.1| HemY protein [Neisseria gonorrhoeae PID24-1] gi|268603196|ref|ZP_06137363.1| HemY protein [Neisseria gonorrhoeae PID1] gi|59717700|gb|AAW89105.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|193933385|gb|ACF29209.1| HemY protein [Neisseria gonorrhoeae NCCP11945] gi|268587327|gb|EEZ52003.1| HemY protein [Neisseria gonorrhoeae PID1] Length = 405 Score = 71.5 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P + R K AL ++ A S V N Sbjct: 61 FIIGVLNIPENMRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E A S + Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387 >gi|301155142|emb|CBW14606.1| predicted protoheme IX synthesis protein [Haemophilus parainfluenzae T3T1] Length = 428 Score = 71.1 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 11/169 (6%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R++ + + L +S V + N +Y S ++ + L L Sbjct: 1 MFRVL-FLMIALLAGLIAGPYLSGQQGYVRVETANTVYEMSLTTLVILFVVTLAVIYSLE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + F + ++ +R K + GLM + + A K+ ++ E Sbjct: 60 WLVTRFFRLSSNTYNWFSRRKRVKAQRQTLEGLMKMNEGDYAKAEKLIGKNAKHSA---E 116 Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 ++ L++ + A A+ L I AT +L E R Sbjct: 117 PVLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLVVEIART 160 >gi|90416179|ref|ZP_01224111.1| hemY protein [marine gamma proteobacterium HTCC2207] gi|90331904|gb|EAS47118.1| hemY protein [marine gamma proteobacterium HTCC2207] Length = 405 Score = 71.1 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 68/399 (17%), Positives = 132/399 (33%), Gaps = 29/399 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M +L+ + LV + V V +++ S + L +L A +LLF Sbjct: 1 MRKLLLLLVLALLVGALAVWVLQFGSGYVLLSFAELTIEMSAWT---GLIIYLAATVLLF 57 Query: 60 AV---SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI--PLARKMHSYVSQQH 114 + R+ +S R + GL+ + A + A+ + + Sbjct: 58 WLLLTWRWIVSA-GGFRSWWRNRRSARNQNQTAEGLL-LFAGDDWQEAAKLLSQSADKSS 115 Query: 115 TFHNEYLVYLL-EVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNS 172 +V LL + A Q++ A + L+ + + P +R A +L Sbjct: 116 M----PVVNLLFAARAAADNEQFDQARQILQRLKVSYPKSRFVADKALAETHLLQERPEE 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + +P + + + L++ W+ A L K + N L Sbjct: 172 ALKILQAVYAENPRDKGLLRLLADAHYLSENWTAAQKMLG-DLKRFQAVNDQDLANLEQD 230 Query: 233 SLENADKGDMIASYHDAIESLKLCDN---SIM--------ASICAAKSLISQNKKRKAEV 281 N + S E ++ I C A SL K +V Sbjct: 231 VYCNLLDSSGLNSRGTISEKRVQLEDIWYLIPRKHQREPQIIACYAASLGRVKLTDKQQV 290 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +L K HP++ + L SE+ +L A + + E + L+ + +I + Sbjct: 291 LLTKSLNRQWHPQLVTQFGELESESPEKQLMVAEKWLVQHGEDADLLLALGRICQRLKFW 350 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 +A A+K+ P + + LA + + + Sbjct: 351 GKAKDYFTTAVKLRPSVQGSIYLASVLEKIGDSNASAEA 389 >gi|260914566|ref|ZP_05921034.1| porphoryin biosynthesis protein HemY [Pasteurella dagmatis ATCC 43325] gi|260631357|gb|EEX49540.1| porphoryin biosynthesis protein HemY [Pasteurella dagmatis ATCC 43325] Length = 422 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 14/180 (7%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R++ + ++ L ++ V I S ++ + + Sbjct: 1 MFRVL-FLMLVLLAGLIAGPYLAGKQGYVLIETSKYSIEMSITTLVIFFVVIMAVIYGIE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V F + +R +K K GLM + + A K+ ++ Sbjct: 60 WVVTRFCRLSNNTYTWFSRRKREKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKHA--EEP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGD 169 L ++ + A A+ L +M+++ TR + D Sbjct: 118 ILNFIKAAEAAQQRGDDFNANRYLIQATELAGSDNLMVELARTRILLQQGKLPAARSSVD 177 >gi|157803661|ref|YP_001492210.1| hypothetical protein A1E_02400 [Rickettsia canadensis str. McKiel] gi|157784924|gb|ABV73425.1| hypothetical protein A1E_02400 [Rickettsia canadensis str. McKiel] Length = 337 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 124/349 (35%), Gaps = 25/349 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L F ++ + V I+ + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLFYFGFTLIESFDSKVFISLYDYNIETTLFFNLILGLVLLISCFIVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116 + P+ + ++ HKR + AL +++ A ++ A + +S + Sbjct: 61 FLILIIELPSKIHNIFHKRKVNHDRYAL---ILAFAEYIMSNKAKSASIARTNLSSEDLK 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ L+ + + +++ + +L AQ Y Sbjct: 118 DSQEFHNLILAVTEE---DIDTKISYFQKLMKSKEFAFYGSKNLAKLYYDKSLYEEAQNY 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAIL--LIA 231 A KA +++ ++ Y W++ TF+ K +++ AI+ + Sbjct: 175 AIKAYNLNELDSDNLITLMHCYGKLSLWTK-FTFITNKLTKFHKYDSIKQMHAIVEYYLL 233 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWK 288 + + + ++ + ++ L N + + + N K K IL+ ++ Sbjct: 234 AAKQEVESNNIAHAIDYLETAIDL--NFYNGELL--EFYFTLNNKLNVNKKTKILKDAFR 289 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + P ++ ++ S + K + + K+ E L++ + LE Sbjct: 290 IVPSLKLVQLFKKFTSLSDRQIYKELTQELDAKKD--EILILAIEAYLE 336 >gi|197334236|ref|YP_002154832.1| HemY protein [Vibrio fischeri MJ11] gi|197315726|gb|ACH65173.1| HemY protein [Vibrio fischeri MJ11] Length = 394 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 59/405 (14%), Positives = 116/405 (28%), Gaps = 52/405 (12%) Query: 1 MLRLIRY-FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+RL+ ++ +I + V I+ N S ++ + + LL Sbjct: 1 MIRLLLLAIVLVGGLIVGTT-FADQQGYVLISVANTTIEMSLTTLVLFIGALIAGLFLLE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + LS R+ K + G++ + A ++ + + + F Sbjct: 60 MIVKRILSVSNYTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAERLITKGGRHNDF--- 116 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ L A RQ +K + Q +T A+ S R A Sbjct: 117 PLLNYLAAAEAAQGRQQIDLRDKYLQLASEQDDSTLAVALTS-AKLQMRQKQYELALATL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS---- 233 P P + E + + Y+ EW +A+ + A +A+ L ++ Sbjct: 176 QFVKVDYPRNPVLLELLKECYLALNEW-QALKNIIHPLSKANLITDQQALELEEKAECGL 234 Query: 234 -LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 A K I IC LI Q + RKA+ Sbjct: 235 MAVIATNKGTAGLLEHWDALPKKLKKHIPILIC----LIQQLQIRKADS----------- 279 Query: 293 PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVI----------------VSK 333 Y L +L L + ++++ +++ Sbjct: 280 ----EAYIILRDNLKKRADDRLVALLPTLNLADYHPVTVLLESMADYDVRNPVIQSTLAQ 335 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + A A+ I + LA++ + Sbjct: 336 LYMRTQKWQPAREHFEAALAIREDMSDYAYLARVLDKQNRKQAAA 380 >gi|192359509|ref|YP_001983837.1| hemY protein [Cellvibrio japonicus Ueda107] gi|190685674|gb|ACE83352.1| hemY protein [Cellvibrio japonicus Ueda107] Length = 402 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 52/379 (13%), Positives = 127/379 (33%), Gaps = 17/379 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61 RL+ F + ++ +++ + I +G + + ++ + L+ + Sbjct: 3 RRLLGIVFFVLIIAALIFLLAQGDGYLLIAFGTKTIEMTLWMAAMLGVLLYGVIWLIRQL 62 Query: 62 SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121 + + + + ++ K +G++ + ARK ++ F Sbjct: 63 IQGSIHVTRRFREIFLFGSVERAQKRAASGMVDYLTGDWVEARKKLVRTFEKIEFPLP-- 120 Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YL + + A LE+ Q P + V + + G A Sbjct: 121 NYLAAARSSFEMGDEEEAERLLELARQHPNSELPVVLTRARLQIQAGRYEQALAIIKPIE 180 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P P V + + Q Y+ W +K L ++E GD Sbjct: 181 LEQPRLPAVLDLLHQIYLAQNNWRALQEMFPAMRKAKVLSAPELQELETRLAVEQL--GD 238 Query: 242 MIASYHDAIESLKL------------CDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288 + + + +L + A +++L+ ++AE ++ K+ Sbjct: 239 AGKAAQQKLIAERLPFLQQQWKDLARAQQKTPEVVLAYSQALVDNYHDQEAESLVRKMLN 298 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +P + N+Y L + +L+ A + + + L+ + ++ + + D A Sbjct: 299 SEWYPPLVNLYGRLQLKEIRAQLRMAEGWLKQHGDDPHLLLTLGRLMVRLEQWDAARDYF 358 Query: 349 MLAMKIAPRKEIFLLLAQI 367 + K++ + E + LA + Sbjct: 359 QRSFKLSAKVETAMELAAL 377 >gi|126666608|ref|ZP_01737586.1| uncharacterized enzyme of heme biosynthesis [Marinobacter sp. ELB17] gi|126628996|gb|EAZ99615.1| uncharacterized enzyme of heme biosynthesis [Marinobacter sp. ELB17] Length = 413 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 63/371 (16%), Positives = 142/371 (38%), Gaps = 23/371 (6%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 + +++GN L T+ +V L++L + ++L + R + +M+ + + + Sbjct: 27 GYIRVSFGNYLVETNFWVGLALLVALVVLTVMLIGLVRRLRNGTSMMSGWIARGKERRAR 86 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLE 144 + GL+++A N P A+KM + + + L+ L Q + + E L Sbjct: 87 RRTTQGLLALAEGNWPRAKKMLTSSASNA---DTPLINYLAAAQASFECGDHEAVDELLR 143 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT--KALDISPDAPWVTEAVVQQYVLAK 202 + + AV + ++ Q AT + SP P+V + + Y+ + Sbjct: 144 KAFESTPGSDLAV-GITQVQLQLAGNRVEQALATLLRLRKQSPHHPFVLKLLKTAYLRLE 202 Query: 203 EWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +W L + +K + R L+ ++ K L Sbjct: 203 DWRELSKLLPKLRKYNILVSAELDDLERQTWHNLLEKAASKCRKEQASNPASSLDSLTGL 262 Query: 256 CDNSIMASICA--------AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 D +S+ L + +AE++L K+ + + E+ N+Y + S+ Sbjct: 263 WDQL-PSSMRRDERTIFNYTSLLAGLGDEAQAEILLRKVLRNHWSDELINLYGRVESQAP 321 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L A + + + E L+ + +++L +A ++K+ ++E L+++ Sbjct: 322 DEQLLLAEQWLKNRPNNAELLLALGRLSLRNELWGKAREYFETSLKLQRKRETLAELSRL 381 Query: 368 EQANSHNTDKI 378 H+T I Sbjct: 382 NAHMGHDTASI 392 >gi|149376993|ref|ZP_01894747.1| uncharacterized enzyme of heme biosynthesis [Marinobacter algicola DG893] gi|149358770|gb|EDM47240.1| uncharacterized enzyme of heme biosynthesis [Marinobacter algicola DG893] Length = 412 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 61/373 (16%), Positives = 134/373 (35%), Gaps = 49/373 (13%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 + I+ GN L T+ ++ L++L + +L + R M+ L + N + Sbjct: 27 GYIRISLGNYLIETNFWIGLALLVLLVVVSVLTINLFRRLRHGTGMVAGWLARSNERRAR 86 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIA----H 140 + GL+++A N P ARK+ + S +H + L+ L Q + + Sbjct: 87 RRTTQGLLALAEGNWPRARKLLT-SSAEHA--DTPLINYLAAAQASFESGDHEAVDELLR 143 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALD-------ISPDAPW 189 + E +G + + A +AL +P P+ Sbjct: 144 KAFESTPGSD--------------MAVGITQAQLQLAGNRLEQALATLVRLRKQAPHHPF 189 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADK--G 240 V + + YV ++W L + +K + R L+ R+ E + G Sbjct: 190 VLKLLKNTYVRLEDWRELSRLLPEIRKRNLMESEEQGDLERLVWQNLLQRAAEECRRHSG 249 Query: 241 DMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + AS + + A+ L + +AE +L K+ + + E+ Sbjct: 250 EPSASLEPLTKLWDELPGFLRRDEHTIREYARLLADLGDEAQAETLLRKVLRNHWGDELV 309 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 N+Y + +L A + + + E L+ + +++L +A ++++ Sbjct: 310 NLYGRVKGLKPDEQLLVAEQWLKDRPNNAELLLALGRLSLRNELWGKAREYFETSLRL-- 367 Query: 357 RKEIFLLLAQIEQ 369 + +A++ + Sbjct: 368 -RRSRETMAELSR 379 >gi|330817974|ref|YP_004361679.1| HemY domain protein [Burkholderia gladioli BSR3] gi|327370367|gb|AEA61723.1| HemY domain protein [Burkholderia gladioli BSR3] Length = 398 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 126/398 (31%), Gaps = 18/398 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPED-VSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V + V I + S + + + L Sbjct: 5 LRGILWLAVLFAIAVALATVGRFDGGQVLIVYPPYRVDVSLNLFIVSIVVLFVVIYALLR 64 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++K + +L + ++ A A K + Sbjct: 65 IVRNIWRMPQRVAAYRKRMRHEKAHASLRDAIANLYAGRFSRAEKAARDALSVDANQSAA 124 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + + E + R A + E+ D A + Sbjct: 125 GLVGAVAAHRMHEYARRDEWLARVDANEWQEARLLATADMRAEAR---DAEGALAALAEM 181 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--- 237 + ++ K W+ + L + + + + A+ + ++ E+ Sbjct: 182 QASGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRMRQQAAEHLLRD 240 Query: 238 ---DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 D ++ + + + + AA+ L++ ++ +A I+E N Sbjct: 241 RRHDADALLEVWQSLSAAERQSPRL---ADLAAELLVALERQPEARRIVEDALAHNWDAR 297 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + Y + + +++A + + + E LV + ++ + +A + A+K+ Sbjct: 298 LLRRYPDTAGSDALPLIQKAEGWKRDHPDDAELLVALGRLCQKQQLWGKAQSFLEAALKL 357 Query: 355 APRK----EIFLLLAQIEQANSHNTDKILYWTQSALHA 388 + + LA + + ++ +SAL A Sbjct: 358 SDSEALKVRAHRALASLFEHLGDQEKAARHYRESALAA 395 >gi|157368424|ref|YP_001476413.1| putative protoheme IX biogenesis protein [Serratia proteamaculans 568] gi|157320188|gb|ABV39285.1| HemY protein [Serratia proteamaculans 568] Length = 398 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 49/364 (13%), Positives = 108/364 (29%), Gaps = 7/364 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ + +++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNIETSVTGLVIMGVLLFVVLLVIEWILRRIFRTGAHTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RSRARKQTKAALIKLAEGDYKQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDDFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE + T + V + G+ ++A+ + L+ +P P V Y+ Sbjct: 139 QYLERAAEAADTDQLPVDITRVRIQLAQGENHAARHGVDRLLNQAPRHPEVLRLAELAYL 198 Query: 200 LAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++ + L E + I + + + Sbjct: 199 RTGAFASLLEILPSMSKINLHTDAELQALQQQAYIGLMNQAMADEGSEGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + + I LI N A+ I+ K + + L S N K Sbjct: 259 TRHEVPLQIAMVDHLIECNDHELAQEIVLDSLKRQYDERLVLLIPRLKSGNPQQLEKALR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ ++ G QA A+K P + LA + + Sbjct: 319 QQVKQHGATPLLNSTLGQLLMKHGEWQQAADAFREALKQRPDAYDYAWLADVLDKLHRSD 378 Query: 376 DKIL 379 + Sbjct: 379 EAAQ 382 >gi|149375196|ref|ZP_01892968.1| TPR repeat protein [Marinobacter algicola DG893] gi|149360560|gb|EDM49012.1| TPR repeat protein [Marinobacter algicola DG893] Length = 898 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 102/311 (32%), Gaps = 38/311 (12%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E LLE QI LA + + A +I + +V L + GD++ A+ + Sbjct: 145 ETQAALLEGQIYLAANELDKARTAFNRAREIDSGDVESVIGLSKTAFAGGDVSKARTLVS 204 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLE 235 +A I ++ + + +EW +A + ++ +++ + + + Sbjct: 205 EAEGIDGESGELWLWKAELAASQEEWQKAEDAYIKALEDIGQYDVMTQRKYATISSLIRV 264 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE- 294 +G ++ K +I +++ AA++ + Q +A LE++ P+ E Sbjct: 265 LRAQGKQSEAFVYEEILAKSAPGTIKSNLMAAQAAVEQGDLDEAARYLEEVLTQAPNHEQ 324 Query: 295 --------------------IANIYTHLLSENTVGKLKRALRLEEINKE----------- 323 + + T KL A RL+ N E Sbjct: 325 TSLMLGLVRFRQGRVEDAEKLLAPIAEAGNSETASKLLAAARLQMRNPEGAQAILSNLED 384 Query: 324 ---SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 E+L +V+ L G + A+ P L D+ + Sbjct: 385 KDSDPETLAMVAIATLASGDLKTGETLMDKALASNPDNHQLRLRYATYLNQRGEHDRAIA 444 Query: 381 WTQSALHAMPD 391 L + P+ Sbjct: 445 EATRVLESAPE 455 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 15/257 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 AR + + F + + L Q A E + + A ++ Q + Sbjct: 646 GETARAVALLDRARALFPDNQDIALQAAQQAFNEGKEDEARRIIQETKQQHPESAAPYVT 705 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 R + A AL+ P A + + A++FL +K Sbjct: 706 EAAYFERQQEYQQAAELYQLALNKRPSAELANGYATNLQ-RSGKTQEALSFLETARKTYP 764 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N+ + +L +G ++ + L+ +++ A KR A Sbjct: 765 GSNQLLL----SLALLQQSEGQQESAKSNYETLLETSPGNVVVLNNLAWIYHEGGDKR-A 819 Query: 280 EVILEKIWKVNP-HPEIANIYTHLL-----SENTVGKLKRALRLEEINKESVESLVIVSK 333 + ++ ++++P + +A+ Y ++ E +V L++A L ES E + +++ Sbjct: 820 IGLAKQAYELSPDNAAVADTYGWIMLKAGNHEASVPILEKAHEL---QPESEEIALHLAE 876 Query: 334 IALEMGSIDQAHAKAML 350 +G A Sbjct: 877 AYRSVGKNSAARKVLEK 893 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 22/191 (11%), Positives = 60/191 (31%), Gaps = 3/191 (1%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + ++AL + A ++ +++ A+ L R Sbjct: 516 KAREKAPESPAPLISLGRLALTQDDQAEAQKQFRAAVRLAPDSRQALQGLATVLGREETT 575 Query: 171 NSAQR-YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + P + A++ + A +++ A + Sbjct: 576 GFMREILKENPEATGPRLILLEAALMDNKRQEADDLTASLLERKEQTTPSPATPFVAGIY 635 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + G+ + + L ++ ++ AA+ ++ K+ +A I+++ Sbjct: 636 SSTASAFQNSGETARAVALLDRARALFPDNQDIALQAAQQAFNEGKEDEARRIIQET--K 693 Query: 290 NPHPEIANIYT 300 HPE A Y Sbjct: 694 QQHPESAAPYV 704 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 19/252 (7%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ +L Q + + A E++ + P T + + + + GDL+ A RY Sbjct: 260 SLIRVLRAQ-----GKQSEAFVYEEILAKSAPGTIKSNLMA-AQAAVEQGDLDEAARYLE 313 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + L +P+ + + A L A+ N A L+A + Sbjct: 314 EVLTQAPNHEQTSLMLGLVRFRQGRVEDAEKLL---APIAEAGNSETASKLLAAARLQMR 370 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--H--PE 294 + + +E ++ A + ++ + E +++K NP H Sbjct: 371 NPEGAQAILSNLEDKDSDPETL---AMVAIATLASGDLKTGETLMDKALASNPDNHQLRL 427 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 Y + E+ + LE E ++ ++ + G++D A A ++ Sbjct: 428 RYATYLNQRGEHDRAIAEATRVLES-APELEQARSVIVEAQARSGNMDAAVKTASQWIEE 486 Query: 355 APRKEIFLLLAQ 366 P I L+ + Sbjct: 487 VPD-SINALMTR 497 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 28/242 (11%), Positives = 77/242 (31%), Gaps = 55/242 (22%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + +L +++ A+ L+ + A+L ++ + Sbjct: 113 ASLILAEANLLQEDFDDALAALDDITSPDRPVETQAALL---EGQIYLAANELDKARTAF 169 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------------WKVNPHPEIA- 296 + ++ + + I +K+ + KA ++ + WK E+A Sbjct: 170 NRAREIDSGDVESVIGLSKTAFAGGDVSKARTLVSEAEGIDGESGELWLWKA----ELAA 225 Query: 297 ---------NIYTHLLSE---------------NTVGKLKRA-----------LRLEEIN 321 + Y L + +++ ++ RA L + Sbjct: 226 SQEEWQKAEDAYIKALEDIGQYDVMTQRKYATISSLIRVLRAQGKQSEAFVYEEILAKSA 285 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 +++S ++ ++ A+E G +D+A + AP E L+ + + + Sbjct: 286 PGTIKSNLMAAQAAVEQGDLDEAARYLEEVLTQAPNHEQTSLMLGLVRFRQGRVEDAEKL 345 Query: 382 TQ 383 Sbjct: 346 LA 347 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 8/121 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-- 222 R G+L ++ A A+++ P+ +V + A + + A LNQ + Sbjct: 47 QRQGELKASTLEARSAIELQPEKIEPYFLIVNNLLKAGDAANAERHLNQILERLPAEQID 106 Query: 223 ---RNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 RNRA L++A + L D D +A+ D + A++ + ++ N+ K Sbjct: 107 AKVRNRASLILAEANLLQEDFDDALAALDDITSPDR--PVETQAALLEGQIYLAANELDK 164 Query: 279 A 279 A Sbjct: 165 A 165 >gi|300114393|ref|YP_003760968.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii C-113] gi|299540330|gb|ADJ28647.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus watsonii C-113] Length = 931 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 89/277 (32%), Gaps = 20/277 (7%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------IPATREFAVYSLYFES 164 LL + L R ++ A E + M + P T Y Sbjct: 433 KALKLEPQMPQADLLVILSHLQARNFDKAIEAAQQMHRKYPDSPEPLTLMGGAY------ 486 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ A+ +AL ++P AP + + +AI+ Q K +N N Sbjct: 487 LGKGEKAKARSAFREALKVAPGAPNAIHNLANLEIQKGNLEKAISLYQQTLK----YNPN 542 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-- 282 L+ + +G++ + ++++ ++ + + + +KA I Sbjct: 543 HLHTLLRLAALEQQRGNIAKAKILLEQAMQAHPQALNPRLLLGDYYLRDGQPQKALAITS 602 Query: 283 -LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ + NP L + L+ +L + +S + +++ E Sbjct: 603 DIQDTFPDNPALLALAGKIQLALGKSRNALRYFNKLVSLQPDSATAHYELARAYYETKQF 662 Query: 342 DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 + + + + P ++A++ + Sbjct: 663 TKTQTELEKTLVLDPNHAGARFVMARLLMQEGKQEEA 699 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 85/262 (32%), Gaps = 19/262 (7%) Query: 100 IPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 I A++MH + + L L L + + A L++ A++ Sbjct: 462 IEAAQQMH-----RKYPDSPEPLT--LMGGAYLGKGEKAKARSAFREALKVAPGAPNAIH 514 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L + G+L A + L +P+ + ++A L Q + Sbjct: 515 NLANLEIQKGNLEKAISLYQQTLKYNPNHLHTLLRLAALEQQRGNIAKAKILLEQAMQAH 574 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + R +L G + + ++ A K ++ K R Sbjct: 575 PQALNPRLLLGDYY----LRDGQPQKALAITSDIQDTFPDNPALLALAGKIQLALGKSRN 630 Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A K+ + P H E+A Y + T + + L ++ + ++++ Sbjct: 631 ALRYFNKLVSLQPDSATAHYELARAYYE-TKQFTKTQTELEKTLV-LDPNHAGARFVMAR 688 Query: 334 IALEMGSIDQAHAKAMLAMKIA 355 + ++ G ++A + + Sbjct: 689 LLMQEGKQEEAKKQLRELKRTH 710 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 95/262 (36%), Gaps = 10/262 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + + + Q TF + + L +I LA + A ++ + A Y Sbjct: 591 DGQPQKALAITSDIQDTFPDNPALLALAGKIQLALGKSRNALRYFNKLVSLQPDSATAHY 650 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L Q K L + P+ + + + + A ++ + Sbjct: 651 ELARAYYETKQFTKTQTELEKTLVLDPNHAGARFVMARLLMQEGKQEEA----KKQLREL 706 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 K + N+ ++ + + + ++ +S + A+ K++ Sbjct: 707 KRTHLNQPEVIDLEAQLALQQNQPSEAIEIYQKAHNDFPDSNRWPLKLAQIQWQTGKQKD 766 Query: 279 AEVILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVSKIA- 335 + LEK W + HP + + + +G+ RA ++++++ E++++++ +A Sbjct: 767 SLATLEK-WLKS-HPEDFQVQFVAANNYLLLGQNNRAESAFAKLHEQAPENVLVLNNLAW 824 Query: 336 -LEMGSIDQAHAKAMLAMKIAP 356 + QA A A+++AP Sbjct: 825 LIHKKEPTQALGYAKQALELAP 846 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 88/317 (27%), Gaps = 45/317 (14%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK---LEMMLQIPA 151 + A + P A K + + AL +R++ A E + + Sbjct: 78 VKAGDGPSAEKELKRALSLGLA--PEATAISLTRAALLQREFQTAVEASTDYPTLPKEEQ 135 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKEW- 204 A+ + + L A++ AL I+PD P A+ ++W Sbjct: 136 AELLALRGHAYLGLQE--LEKAEKSYESALSINPDTPEAGFGKARIAALQDHLEETRQWL 193 Query: 205 SRAITF-------------LNQKKKNAKEWNRNR----------AILLIARSLENADKGD 241 + + L++ + N + + A L+ R+L D Sbjct: 194 EKVLQTTPSFAPAWSLLGDLDRYQGNGEAAEQAYGKAIAHRFNNASDLLNRALVRIYLKD 253 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + D K N + Q + A +K NP A Y Sbjct: 254 YEGAASDLETLSKRAPNHPGVTYAQGLLYFQQQQYADALTDFQKTLNQNPKYMPAVFYAG 313 Query: 302 LLSE-----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +L + +S + +++ + G A + + P Sbjct: 314 IAHYQQGQMEQAERL--LQQFLAYFPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYP 371 Query: 357 -RKEIFLLLAQIEQANS 372 I L+ I Sbjct: 372 NDTHILTLMGDIALRQG 388 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 7/194 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G + A+R + L P + + + ++ A + L N Sbjct: 318 QQGQMEQAERLLQQFLAYFPQSEAAAKVLAVVRFHKGDYKGAESVLKPLLARYP----ND 373 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L +G + S A + L + ++ +LEK Sbjct: 374 THILTLMGDIALRQGKAREGTGYFQQVTIQEPESAAAYMKLGLGLEFSGEHQQGIQMLEK 433 Query: 286 IWKVNPH-P--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K+ P P ++ I +HL + N ++ A ++ +S E L ++ L G Sbjct: 434 ALKLEPQMPQADLLVILSHLQARNFDKAIEAAQQMHRKYPDSPEPLTLMGGAYLGKGEKA 493 Query: 343 QAHAKAMLAMKIAP 356 +A + A+K+AP Sbjct: 494 KARSAFREALKVAP 507 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 3/113 (2%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 V + L Q N A + + + +L + + + A YA +AL Sbjct: 784 VQFVAANNYLLLGQNNRAESAFAKLHEQAPENVLVLNNLAWLIHK-KEPTQALGYAKQAL 842 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 +++P+ P V + + + + +A+ KK + K +A++L Sbjct: 843 ELAPENPEVMDTLGVILLKKGQIRKALGLF--KKASRKLPQNQDIQFHLAQAL 893 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 41/202 (20%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL +PD + Q YV A + A L + AI L +L + Sbjct: 59 ALQKTPDNQEARWLLGQAYVKAGDGPSAEKELKRALSLGLAPE-ATAISLTRAALLQRE- 116 Query: 240 GDMIASYHDAIESLKLCDNSIM---ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + A+E+ A + A + Sbjct: 117 ------FQTAVEASTDYPTLPKEEQAELLALR---------------------------G 143 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + Y L K IN ++ E+ ++IA +++ ++ P Sbjct: 144 HAYLGLQELEKAE--KSYESALSINPDTPEAGFGKARIAALQDHLEETRQWLEKVLQTTP 201 Query: 357 R-KEIFLLLAQIEQANSHNTDK 377 + LL +++ + Sbjct: 202 SFAPAWSLLGDLDRYQGNGEAA 223 >gi|59710670|ref|YP_203446.1| protoheme IX synthesis protein [Vibrio fischeri ES114] gi|59478771|gb|AAW84558.1| predicted protoheme IX synthesis protein [Vibrio fischeri ES114] Length = 394 Score = 71.1 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 58/405 (14%), Positives = 116/405 (28%), Gaps = 52/405 (12%) Query: 1 MLRLIRY-FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+RL+ ++ +I + V I+ N S ++ + + LL Sbjct: 1 MIRLLLLAIVLVGGLIVGTT-FADQQGYVLISVANTTIEMSLTTLVLFIGALIAGLFLLE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + LS R+ K + G++ + A ++ + + + F Sbjct: 60 MIVKRILSVSNYTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAERLITKGGRHNDF--- 116 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ L A RQ +K + Q +T A+ S R A Sbjct: 117 PLLNYLAAAEAAQGRQQIDLRDKYLQLASEQDDSTLAVALTS-AKLQMRQKQYELALATL 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS---- 233 P P + E + + Y+ EW +A+ + A +A+ L ++ Sbjct: 176 QFVKVDYPRNPVLLELLKECYLALNEW-QALKNIIHPLSKANLITDQQALELEEKAECGL 234 Query: 234 -LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 A K + IC LI Q + RKA+ Sbjct: 235 MAVIATNKGTAGLLEHWDALPKKLKKHVPILIC----LIQQLQARKADS----------- 279 Query: 293 PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVI----------------VSK 333 Y L +L L + ++++ +++ Sbjct: 280 ----EAYIILRDNLKKRADDRLVALLPTLNLADYHPVTVLLESMADYDVRNPVIQSTLAQ 335 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + A A+ I + LA++ + Sbjct: 336 LYMRTQKWQPAREHFEAALAIREDMSDYAYLARVLDKQNRKQAAA 380 >gi|240112470|ref|ZP_04726960.1| HemY protein [Neisseria gonorrhoeae MS11] gi|240115210|ref|ZP_04729272.1| HemY protein [Neisseria gonorrhoeae PID18] gi|240125303|ref|ZP_04738189.1| HemY protein [Neisseria gonorrhoeae SK-92-679] gi|254493273|ref|ZP_05106444.1| HemY protein [Neisseria gonorrhoeae 1291] gi|268598538|ref|ZP_06132705.1| HemY protein [Neisseria gonorrhoeae MS11] gi|268600890|ref|ZP_06135057.1| HemY protein [Neisseria gonorrhoeae PID18] gi|268683904|ref|ZP_06150766.1| HemY protein [Neisseria gonorrhoeae SK-92-679] gi|226512313|gb|EEH61658.1| HemY protein [Neisseria gonorrhoeae 1291] gi|268582669|gb|EEZ47345.1| HemY protein [Neisseria gonorrhoeae MS11] gi|268585021|gb|EEZ49697.1| HemY protein [Neisseria gonorrhoeae PID18] gi|268624188|gb|EEZ56588.1| HemY protein [Neisseria gonorrhoeae SK-92-679] Length = 405 Score = 70.7 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV + G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVFVVVGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P + R K AL ++ A S V N Sbjct: 61 FIIGVLNIPENMRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E A S + Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387 >gi|304309755|ref|YP_003809353.1| porphyrin biosynthesis protein [gamma proteobacterium HdN1] gi|301795488|emb|CBL43686.1| porphyrin biosynthesis protein [gamma proteobacterium HdN1] Length = 416 Score = 70.7 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 61/401 (15%), Positives = 129/401 (32%), Gaps = 54/401 (13%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 LI + + LV ++ P V +++ TS V + + I+ + + Sbjct: 9 LIFFAVAVVLVSMFCAKLARNPGYVLLSYRYYTLETSMLVGFLSIVLLVVLSIVGYRL-- 66 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 + + R + GL++ A N P A K+ S + ++ L+ Sbjct: 67 TVWLFDSNWRRRMANRKTMR-------GLIAYAEGNWPQAEKLLSRSAGN---NDAPLIN 116 Query: 124 LL-EVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQRYA 177 L + A + + + +LQ T + + F+ SA Sbjct: 117 FLAAAEAAHQQGKTEKRDDY---LLQAHETIPGVEQSVGLAKARFQILSE-QWESALA-T 171 Query: 178 TKALDISPDAPWVTEAVVQQYVLA----KEWSRAITFL----NQKKKNAKEWNRNRAILL 229 + L +P +P V++ +W L Q+ A E++ L Sbjct: 172 LRMLKQNPKSP-GYPFVLKLLAQTYNELADWPALRDLLPELQKQQVLEAAEFDVLTQRCL 230 Query: 230 IARSLENADKGDMIASY-------HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + + ++ + I + A+ L ++AE + Sbjct: 231 EGQLAAAVRGTTEEGARLNLRGVWDTVPKKMRYNADLI---LGYAQRLAEAGASKEAEEV 287 Query: 283 ----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 L K W + +Y + S + +L+ A + + L+ + +++L Sbjct: 288 VASFLRKNWDER----LVRLYGTIQSPDPAKQLQHAEGWAKEHPMDAALLLALGRLSLLN 343 Query: 339 GSIDQAHAKAMLAMKIAPRKEIF----LLLAQIEQANSHNT 375 +QAH ++ E LLA + Q + N Sbjct: 344 QQWEQAHRYFESSLNARKSAEACGELGRLLASLGQHDRSNE 384 >gi|319638046|ref|ZP_07992810.1| HemY protein [Neisseria mucosa C102] gi|317400691|gb|EFV81348.1| HemY protein [Neisseria mucosa C102] Length = 407 Score = 70.7 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 126/383 (32%), Gaps = 26/383 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y +V + + R + + L +F L Sbjct: 1 MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58 Query: 61 VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116 +F PA + R + +L + ++ A + + V Q Sbjct: 59 -IKFVFGLLNLPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEAAKVLQNKEAG 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175 N L +L A + + L + +P ++ + + L E + D +A + Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALGRRDYPTAAQ 177 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233 A I+ + + ++ + S + + K ++ + R Sbjct: 178 NLEAAAKINGNLSRLVRLQLRYAFDHGDASDVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237 Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L E D G + A ES+K LC + A+ +A ++ + Sbjct: 238 LLSEVTDAGRLKACLKQIPESVKSGELC-------VAIAEKYERLGLYTEAVKWVKTHYP 290 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344 N PE+ + + + ++A+ L + + L+ + ++A +A Sbjct: 291 QNRQPELLEAFVESVRFLSERDQQKAIDLADSWLQEQPNNALLLMYLGQLAYGRKLWGKA 350 Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367 ++ + P L+LA++ Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373 >gi|294637948|ref|ZP_06716216.1| HemY protein [Edwardsiella tarda ATCC 23685] gi|291088909|gb|EFE21470.1| HemY protein [Edwardsiella tarda ATCC 23685] Length = 399 Score = 70.7 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 56/391 (14%), Positives = 117/391 (29%), Gaps = 21/391 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML+++ F ++ I + + + V I N TS ++ +L + L Sbjct: 1 MLKVLLLFIILIAGIVLGPMFAGHQGYVLIQTDNYNIETSVTSLVIMLVLLMVVLFALEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R L A R + + GL+ + + K+ + + Sbjct: 61 LLRRLLRTGARTRGWFIGRKRSRARRQTREGLLKLTEGDYGQVEKLLARNADHA--DQPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI--------PATREFAVYSLYFESCRIGDLNS 172 + YLL + A A++ LE ++ TR + ++ Sbjct: 119 VNYLLAAEAAQQRGDELRANQYLERAAEVAGSDQLPVDITRV-------RLQLARKEYHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ L+ +P P V Q Y+ + + L K + + L + Sbjct: 172 ARHGVDALLNYAPRHPQVLRLAEQAYLHTDAFEPLLEILPALAKAGEHSDEQIEKLQLRA 231 Query: 233 SLENADKGDM---IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288 + D+ ++ A A A+ LI + A+ ++ K Sbjct: 232 YIGLMDQAMANGGSEGLKQWWKAQGRKTRHETALQVALAEHLIECDDHLAAQQMVVDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + L S K + + S + ++ + G A Sbjct: 292 RRFDERLVRLMPRLKSSQPEQLEKLLQQQIRQHGASALLNSTLGQLLMRHGEWQAAADAL 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+K P + LA + + + Sbjct: 352 RAALKQRPDAYDYAWLADVLEKLHRPEEAAQ 382 >gi|198243522|ref|YP_002217868.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938038|gb|ACH75371.1| HemY protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 399 Score = 70.7 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RAIL + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAILEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|161505552|ref|YP_001572664.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866899|gb|ABX23522.1| hypothetical protein SARI_03717 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 399 Score = 70.7 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 LAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|239998552|ref|ZP_04718476.1| HemY protein [Neisseria gonorrhoeae 35/02] gi|240080257|ref|ZP_04724800.1| HemY protein [Neisseria gonorrhoeae FA19] gi|240123050|ref|ZP_04736006.1| HemY protein [Neisseria gonorrhoeae PID332] gi|260440972|ref|ZP_05794788.1| HemY protein [Neisseria gonorrhoeae DGI2] gi|268594410|ref|ZP_06128577.1| HemY protein [Neisseria gonorrhoeae 35/02] gi|268596407|ref|ZP_06130574.1| HemY protein [Neisseria gonorrhoeae FA19] gi|268681677|ref|ZP_06148539.1| HemY protein [Neisseria gonorrhoeae PID332] gi|291044300|ref|ZP_06570009.1| HemY protein [Neisseria gonorrhoeae DGI2] gi|293399491|ref|ZP_06643644.1| HemY protein [Neisseria gonorrhoeae F62] gi|268547799|gb|EEZ43217.1| HemY protein [Neisseria gonorrhoeae 35/02] gi|268550195|gb|EEZ45214.1| HemY protein [Neisseria gonorrhoeae FA19] gi|268621961|gb|EEZ54361.1| HemY protein [Neisseria gonorrhoeae PID332] gi|291011194|gb|EFE03190.1| HemY protein [Neisseria gonorrhoeae DGI2] gi|291610060|gb|EFF39182.1| HemY protein [Neisseria gonorrhoeae F62] gi|317163827|gb|ADV07368.1| hypothetical protein NGTW08_0396 [Neisseria gonorrhoeae TCDC-NG08107] Length = 405 Score = 70.7 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV I G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P + R K AL ++ A S V N Sbjct: 61 FIIGVLNIPEKMQRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E A S + Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387 >gi|158521593|ref|YP_001529463.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158510419|gb|ABW67386.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 767 Score = 70.7 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 82/244 (33%), Gaps = 13/244 (5%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L +I E ++ A + +L + A+ L + GD A+ + +A+ Sbjct: 133 ALFLFAEICEKEGRFKQAEQLYGRVLSVQRDNTAALLRLGAIFAKTGDTVQARAHLEQAV 192 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P A + ++ K++S A + A + L I + Sbjct: 193 AVDPSAIDPRLVLFNFHMSRKDYSAA----EKALAEAVAAHPENPDLHILLGNFYFSRKQ 248 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEI 295 + +++++ + + A + AA + + KA + VNP H + Sbjct: 249 PDQAEQAFLKAVETGGDHLPARLAAANFYRAVGRPDKALEMYRSALAVNPRSLRARH-AL 307 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 A Y + K + + N + + ++ ++ + D+A + + Sbjct: 308 AGFYLENNLLDAAA--KEVETILQANDTYLPARLLKIRLLIVRQEYDRAISLCDAYLTEN 365 Query: 356 PRKE 359 P Sbjct: 366 PTSS 369 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 76/264 (28%), Gaps = 45/264 (17%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-- 191 Y A + + + A L ++GD+ A + L+I P Sbjct: 43 GDYRQAEQAYRQAIDTEPSLVSAWMGLAETRLKLGDVKEATDAYARLLEIDPGHVPARLN 102 Query: 192 -----------------------------EAVV---QQYVLAKEWSRAITFLNQKKKNAK 219 +A+ + + +A + Sbjct: 103 MARFDLLSNRLEAAEQGVQQVLSVEPANIDALFLFAEICEKEGRFKQAEQLYGRVLS--- 159 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R+ L+ A GD + + +++ + ++I + +S+ A Sbjct: 160 -VQRDNTAALLRLGAIFAKTGDTVQARAHLEQAVAVDPSAIDPRLVLFNFHMSRKDYSAA 218 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 E L + +P H + N Y + + L+ E + + + + + Sbjct: 219 EKALAEAVAAHPENPDLHILLGNFYFSRKQPDQAE--QAFLKAVETGGDHLPARLAAANF 276 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRK 358 +G D+A A+ + PR Sbjct: 277 YRAVGRPDKALEMYRSALAVNPRS 300 Score = 37.6 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 4/161 (2%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L A + + A E L + A ++L L++A + L Sbjct: 269 ARLAAANFYRAVGRPDKALEMYRSALAVNPRSLRARHALAGFYLENNLLDAAAKEVETIL 328 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + ++ ++ +E+ RAI+ + + L A+ L K D Sbjct: 329 QANDTYLPARLLKIRLLIVRQEYDRAISLCDAYLTENPTSSD----LYYAKGLAFWHKED 384 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 ++++ ++ L +I A + A + + KA+ + Sbjct: 385 LVSAEKAVSRAIALSPGNISARLRLADIYLKMGETEKAQAV 425 >gi|330501257|ref|YP_004378126.1| HemY domain-containing protein [Pseudomonas mendocina NK-01] gi|328915543|gb|AEB56374.1| HemY domain-containing protein [Pseudomonas mendocina NK-01] Length = 415 Score = 70.7 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 127/383 (33%), Gaps = 24/383 (6%) Query: 11 ISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPA 70 + L + S I + V + Y++ + L +L + + L+ R LS Sbjct: 15 VGLYLLSLAIEADR-GYVLFAYKGFRYQSGLWAFLGLLVVVVMLYYLIKWTLRLLLSSTR 73 Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 + + +A G++ +A AR + YL + A Sbjct: 74 LANPWSRLHRTRRVRQASEQGMLDLA--EGRWARAQRQLTRAAEADSQPLMYYLGAARAA 131 Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPW 189 +Y + LE L E A+ + E R GD ++A + P Sbjct: 132 NKLGEYEQSDALLERALNKQPQAELAIALTHAELQRSRGDSDAALETLQAMRERHPGHHL 191 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK---------EWNRNRAILL----IARSLEN 236 V + + Y+ ++WS + L + +K E R L + Sbjct: 192 VLRQLQRLYLQRQDWSALLGLLPELRKEKALPAAELDELERETWRGRLAEVGEYGLAQGE 251 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + +++ SL+ I + L + +AE +L K + +A Sbjct: 252 TALQPLSKAWNQLSVSLRNEPELI---ATYVEQLRRLGAQEEAEEVLRSALKRSYDSRLA 308 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-- 354 Y L + +L+ A + + + L+ + ++ L+ +A ++K+ Sbjct: 309 RFYGVLRGADPARQLQTAELWLKQHPQDPALLLTLGRLCLQNQLWGKARDYFETSLKLER 368 Query: 355 --APRKEIFLLLAQIEQANSHNT 375 E+ LLAQ+ + N Sbjct: 369 HPETCAELARLLAQLGELERSNQ 391 >gi|241759971|ref|ZP_04758069.1| HemY protein [Neisseria flavescens SK114] gi|241319425|gb|EER55855.1| HemY protein [Neisseria flavescens SK114] Length = 407 Score = 70.3 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 52/383 (13%), Positives = 126/383 (32%), Gaps = 26/383 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y +V + + R + + L +F L Sbjct: 1 MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58 Query: 61 VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116 +F PA + R + +L + ++ A + + V Q Sbjct: 59 -IKFVFGLLNIPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEATKVLQNKEAG 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175 N L +L A + + L + +P ++ + + L E + D +A + Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALSRRDYPTAAQ 177 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233 A I+ + + ++ + + + + K ++ + R Sbjct: 178 NLEAAAKINSNLSRLVRLQLRYAFDHGDAADVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237 Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L E D G + A ES+K LC + A+ A ++ + Sbjct: 238 LLSEATDAGSLKACLKHIPESIKSGELC-------VAIAEKYERLGLYADAVKWVKTYYP 290 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344 PE+ + + + + ++A+ L + ++ L+ + ++A +A Sbjct: 291 QTRQPELLEAFVESVRFLSEREQQKAIDLADSWLQEQPDNAPLLMYLGQLAYGRKLWGKA 350 Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367 ++ + P L+LA++ Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373 >gi|194443869|ref|YP_002043169.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194402532|gb|ACF62754.1| HemY protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 399 Score = 70.3 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|16767206|ref|NP_462821.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167993868|ref|ZP_02574961.1| HemY protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168238389|ref|ZP_02663447.1| HemY protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168467651|ref|ZP_02701488.1| HemY protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822698|ref|ZP_02834698.1| HemY protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194737284|ref|YP_002116867.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|204930248|ref|ZP_03221225.1| HemY protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|224585754|ref|YP_002639553.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|16422499|gb|AAL22780.1| protein for a late step of protoheme IX synthesis [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194712786|gb|ACF92007.1| HemY protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195629961|gb|EDX48621.1| HemY protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197288764|gb|EDY28139.1| HemY protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|204320652|gb|EDZ05854.1| HemY protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205328139|gb|EDZ14903.1| HemY protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340968|gb|EDZ27732.1| HemY protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|224470282|gb|ACN48112.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267996213|gb|ACY91098.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312915054|dbj|BAJ39028.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088346|emb|CBY98106.1| Protein hemY [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322613015|gb|EFY09966.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617397|gb|EFY14297.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625611|gb|EFY22433.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627034|gb|EFY23827.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322638283|gb|EFY34982.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642781|gb|EFY39368.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646977|gb|EFY43479.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650364|gb|EFY46777.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322656345|gb|EFY52639.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657570|gb|EFY53840.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665981|gb|EFY62162.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666720|gb|EFY62897.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671037|gb|EFY67167.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322679256|gb|EFY75308.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681660|gb|EFY77687.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686013|gb|EFY82001.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716899|gb|EFZ08470.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132283|gb|ADX19713.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192639|gb|EFZ77867.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196505|gb|EFZ81655.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203743|gb|EFZ88764.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205382|gb|EFZ90356.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210751|gb|EFZ95627.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215919|gb|EGA00652.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221412|gb|EGA05830.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227311|gb|EGA11478.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231755|gb|EGA15866.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236170|gb|EGA20247.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239593|gb|EGA23641.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244311|gb|EGA28319.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249592|gb|EGA33504.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250316|gb|EGA34202.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256523|gb|EGA40254.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259779|gb|EGA43412.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265187|gb|EGA48685.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268384|gb|EGA51856.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625655|gb|EGE32000.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990771|gb|AEF09754.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 399 Score = 70.3 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|16762199|ref|NP_457816.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143688|ref|NP_807030.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213051701|ref|ZP_03344579.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213623042|ref|ZP_03375825.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289825619|ref|ZP_06544797.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25371608|pir||AG0920 Porphyrin biosynthetic protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504503|emb|CAD09385.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139323|gb|AAO70890.1| porphyrin biosynthetic protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 399 Score = 70.3 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|6960266|gb|AAF33456.1| 96% identity with E. coli hemY protein (HEMY) (SP:P09128); contains similarity to Pfam family PF00515 (TPR Domain), score=18.7, E=0.13, N=1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|322631250|gb|EFY28013.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] Length = 398 Score = 70.0 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 192 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHQPEEAA 381 >gi|239993014|ref|ZP_04713538.1| uncharacterized enzyme of heme biosynthesis [Alteromonas macleodii ATCC 27126] Length = 391 Score = 70.0 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 120/351 (34%), Gaps = 9/351 (2%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 V + GN + +L + AW +L + + LS K Sbjct: 29 GYVLFSLGNTAVEMNIISFGILLIGAVIAWYVLSRLVLWALSLITGSHKWFGTLGERKRK 88 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +A Y GL ++AA + A+K +S+ E + YL QIA A A L Sbjct: 89 RAFYDGLHAMAAGDFDTAQK---ALSKTTNGDFEGVNYLASAQIAFANDDLAKARYFLVQ 145 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 P + A ++A + + + V + Q +W Sbjct: 146 ATDFPKAKVAATVMHARIDMAEEKYDAALEKLNELDEQERENKQVVQLKAQILAKLGKWQ 205 Query: 206 RAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK--LCDNSIM 261 L+ +K ++ + + E A K + + D++ Sbjct: 206 VLQENLSGWRKALPKADYTAWSQRIAKGKFAEIASKQGAVELKSYWETLPRKLRHDDAYR 265 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A+ + L+ Q A+ +L + K P+ + ++T L + L+ + + Sbjct: 266 AAYI--QQLLDQGMHADAQNLLVEWQKRGPNSALFPLFTQLNIPDASPSLRLLESWIKQD 323 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 +E+V + ++A G A + A K+ RKE LLL+ I + Sbjct: 324 EENVSLYSTLGQVAFNSGDDVLAEKALLKATKMKSRKEDLLLLSAISERKH 374 >gi|221134059|ref|ZP_03560364.1| HemY-like protein [Glaciecola sp. HTCC2999] Length = 387 Score = 70.0 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 126/383 (32%), Gaps = 42/383 (10%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSC---PAMLFHMLHKRNYD 82 V I + S + +++ + +++L + + +R Sbjct: 26 GYVLIALKHTTIEMSVISLGIMVFIAVIGFLILEWAVKRIVGAISGSHHWLGSWGERRRQ 85 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQ--------QHTFHNEY-LVYLLEV-----Q 128 + Y +G+ ++A ++ A+K S ++ E L + ++ Q Sbjct: 86 RFY---TSGMQALAEGDLNHAQKWLSKTTKADFDGINLLALADVEAKLGHQVKAMQYWEQ 142 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + A M + T+ ++ I D S Q+ P+ Sbjct: 143 AAAIKGSELAAK---LNMARFEITQNHG-----KQALSIIDSLSIQQ------KQKPNVI 188 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + A EW L K R +A + A+ + + Sbjct: 189 ETWASAL---AAAGEWHALRERLESGWK-KPLGQRYPYWAELASKADFAEIANRDGANEL 244 Query: 249 AIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 E KL I + LI+Q ++AE L K P + ++ L Sbjct: 245 MQEWQKLPRGYKKEIPHQKAYIEQLIAQGMHQEAEKALVTAQKSGPEITLLPLFKLLQLP 304 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 +K + + + ++ ++ +A G+ A A+++ +E LLLA Sbjct: 305 KPTAAIKLLEKWIKKDNKNAVLYSTLAHVAFHSGNAILAEKALNQALELDNHQEDILLLA 364 Query: 366 QIEQANSHNTDKILYWTQSALHA 388 +I +A N+D+ L + L A Sbjct: 365 EI-KAQQANSDEALALYKQGLSA 386 >gi|213419348|ref|ZP_03352414.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 397 Score = 70.0 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 20 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 79 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 80 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 137 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 138 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 190 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 191 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 250 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 251 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 310 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 311 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 370 Query: 369 QANSHNTDKI 378 + Sbjct: 371 DRLHQPEEAA 380 >gi|326796009|ref|YP_004313829.1| hypothetical protein Marme_2766 [Marinomonas mediterranea MMB-1] gi|326546773|gb|ADZ91993.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinomonas mediterranea MMB-1] Length = 390 Score = 70.0 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 105/335 (31%), Gaps = 39/335 (11%) Query: 47 ILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALY----TGLMSIAAHNIPL 102 L+ LF + + V + ++ + K + GL + Sbjct: 5 GLFLVLFIALFVGWV----------MGRRRSEKPTKQELKTISSDYFRGLNHLLNGQQSE 54 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + ++V + ++L + + + A + +L P E + Sbjct: 55 A--IDAFVDSLEVNSETFDIHLTLGNLFRKKGEIEKAINVHQNLLARPDIGEREMR--LV 110 Query: 163 ESCRIGDLNSA--QRYATK-----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + D SA A + A + + ++ Y + W +AI Q + Sbjct: 111 QLELASDFMSAGLLDRAERLLLNIAARKTEFQAQILTLLIDLYEFEQSWDKAIRISEQSQ 170 Query: 216 KNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K + A + K ++ +L + AS+ A+ L Q Sbjct: 171 KAKPSVKEAQRLAHFHCELAQVQVKKEQWKQAFTHFRNALDADPKCVRASVGMAEVLCEQ 230 Query: 274 NKKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 + R A L+ + + +P P + + Y + S + L E NK+ + Sbjct: 231 RRYRDAIKELKNVAEQDPDFIPVILPNLKDAYQRVWSGSGYH-----QFLVEQNKDHSSA 285 Query: 328 LVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +I++ A + ++I P + F Sbjct: 286 SLILALAKHYAQDDKRFAEQFLIEQLRIHPTIKGF 320 >gi|251787827|ref|YP_003002548.1| putative protoheme IX biogenesis protein [Dickeya zeae Ech1591] gi|247536448|gb|ACT05069.1| HemY protein [Dickeya zeae Ech1591] Length = 398 Score = 70.0 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 49/374 (13%), Positives = 114/374 (30%), Gaps = 27/374 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I + TS ++ +L F+ A++ + V R L R Sbjct: 21 LAGHQGYVLIQTDSYNIETSVTGLVIMLVLFMLAFLAVEWVVRRVLRTGVRTRGWFIGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + L+ + + K+ + + + YLL + A Sbjct: 81 RTRARQQTKAALLKLTEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTR 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ + L+++P P V Sbjct: 139 QYLERAAEIADSNQLPVDITRV-------RIQLARNEDHAARHGVDRLLEVAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIAS 245 Q ++ +S + L +K E + I L+ +++ +G Sbjct: 192 LAEQAFLRTHAYSALLDILPAMRKTRLHDEPYLDELQQRATIGLMDQAM---AEGGSEGL 248 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 + ++ + A+ LI + A+ I+ K + + L + Sbjct: 249 KQWWKNQPRKARQALPMQVAMAERLIVCDDHTTAQDIVVDGLKQQFDHRLVQLIPRLNAG 308 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 K + + + + ++ ++ G QA A+ + P + A Sbjct: 309 QPEPLEKLLRQRLKQHHNDALLHSTLGQLLMKHGEWQQASDAFSAALALRPDAYDYAWCA 368 Query: 366 QIEQANSHNTDKIL 379 D Sbjct: 369 DAFDRLKRPEDAAR 382 >gi|207859141|ref|YP_002245792.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206710944|emb|CAR35311.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261249059|emb|CBG26919.1| porphyrin biosynthetic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301160451|emb|CBW19980.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 379 Score = 70.0 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 2 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 61 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 62 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 119 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 120 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 172 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 173 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 232 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 233 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 292 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 293 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 352 Query: 369 QANSHNTDKI 378 + Sbjct: 353 DRLHQPEEAA 362 >gi|197249193|ref|YP_002148861.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197212896|gb|ACH50293.1| HemY protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 399 Score = 69.6 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R R Sbjct: 22 IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGTHTRGWFAGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|240127756|ref|ZP_04740417.1| HemY protein [Neisseria gonorrhoeae SK-93-1035] gi|268686147|ref|ZP_06153009.1| HemY protein [Neisseria gonorrhoeae SK-93-1035] gi|268626431|gb|EEZ58831.1| HemY protein [Neisseria gonorrhoeae SK-93-1035] Length = 405 Score = 69.6 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 56/390 (14%), Positives = 125/390 (32%), Gaps = 14/390 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV + G + R + + + W LF Sbjct: 1 MKTVVWIVVLFAAAVRLALASGIYTGDVFVVVGQTMLRINLHAFVLGSLIAVVVWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P + R K AL ++ A S V N Sbjct: 61 FIIGVLNIPENMRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + + ++ + A+ L + +K +K ++ + ++ Sbjct: 181 AAAKMNANLTRLVRLQLRYAFDRGD---ALQVLAKTEKLSKAGALGKSEMERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + A LK +S+ S+ A+ A +++ + N PE+ Sbjct: 238 QMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLGLYADAVKWVKQHYPHNRRPEL 297 Query: 296 ANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + A + ++ L+ + ++A +A + Sbjct: 298 LEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLLMYLGRLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKIL 379 + + P L+LA++ E A S + Sbjct: 358 IALKPSIPARLVLAKVFDETAQSQKAEAQR 387 >gi|259906878|ref|YP_002647234.1| putative protoheme IX biogenesis protein [Erwinia pyrifoliae Ep1/96] gi|224962500|emb|CAX53955.1| Protein HemY [Erwinia pyrifoliae Ep1/96] gi|283476671|emb|CAY72499.1| Protein hemY [Erwinia pyrifoliae DSM 12163] Length = 396 Score = 69.6 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 23/371 (6%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + +L L + + + R A R Sbjct: 21 IAGHQGYVLIQTNNWNIETSVTGMTIVLLLSLVIILAVEWLLRRVFRTGARTRGWFTGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 K + L+ +A + K+ + YLL + A A+ Sbjct: 81 RRSARKQTHAALVKLAEGDYKQVEKL--LSRHADHAEQPMVNYLLAAEAAQQRGDETRAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ + L+I+P P V Sbjct: 139 QHLERASELNDDDPLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247 Q YV + W + L K + +R + L S AD+G Sbjct: 192 LAEQAYVRTQAWGALLNILPAMEKIQPGDATHRLELQQQCWLGLMSQAMADQGSDGLKRW 251 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 +S K N + A LI + A+ I+ + K + + + L + N Sbjct: 252 WQNQSRKTR-NETALQVAMADHLIVCDDHDTAQKIVLEGLKRHFDERLVMLMPRLKTGNP 310 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 K + + + + + ++ ++ G + + A++ P + LA Sbjct: 311 EQLEKALRQQIKQHGATPLLHSTLGQLLMQHGEWELSSEAFRAALQQRPDAFDYAWLADT 370 Query: 368 EQANSHNTDKI 378 + Sbjct: 371 LDRQHKPEEAA 381 >gi|119899480|ref|YP_934693.1| hypothetical protein azo3190 [Azoarcus sp. BH72] gi|119671893|emb|CAL95807.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 933 Score = 69.6 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 53/379 (13%), Positives = 111/379 (29%), Gaps = 50/379 (13%) Query: 51 FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110 FL A +L V L+K +AL L+ + + A + + Sbjct: 308 FLPAHLLAGTVLMRLNDNEQA-RSHLNKVLERAPNQALARRLLVASYLSSGQAARAMEAL 366 Query: 111 SQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + N L L Q+ +A + A + + A L G Sbjct: 367 QPLLSEANPDAGLLSLAGQVYMASGDADKAETFFARLTTLAPESAQARAQLGAARFATGA 426 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRA 226 + A A + P A+V Y+ ++++ A+ L K+ + + + + Sbjct: 427 ADRAFDDLEAASALDPTNARADVALVLAYLGRRQFAEALAAHAKLEAKQPDNPQTHNLKG 486 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++L D + ++L+L + + A + ++ K A +EK Sbjct: 487 VVLAG-------ANDPAKARAAFEKALELKPDFLPAVANLIRLDLADKKPDAARARMEKA 539 Query: 287 WKVNP--------------------------------------HPEIANIYTHLLSENTV 308 + P P++A + HL Sbjct: 540 MQAAPKNADVLLAYAELQNTLGDPSEAVAATIEQAIKIDPNALAPQLALVRYHLQKREAA 599 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 L +L + + + L ++ + + G + QA + P+ L+ Sbjct: 600 TALPLVQKLAAAHPNNPQVLDVLGRSLVATGDLQQAVNVFTRLIAQQPQAAGPLVTLADA 659 Query: 369 QANSHNTDKILYWTQSALH 387 + + AL Sbjct: 660 HRLRKDNTSAEQALRKALD 678 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 30/266 (11%), Positives = 82/266 (30%), Gaps = 10/266 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + ++ + + + L+ + A E L++ AV Sbjct: 457 GRRQFAEALAAHAKLEAKQPDNPQTHNLKGVVLAGANDPAKARAAFEKALELKPDFLPAV 516 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L ++A+ KA+ +P V A + + S A+ ++ Sbjct: 517 ANLIRLDLADKKPDAARARMEKAMQAAPKNADVLLAYAELQNTLGDPSEAVAATIEQAIK 576 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + L+ L+ + + + + +SL++ + Sbjct: 577 IDPNALAPQLALVRYHLQKREAATALPLVQKLAAAHPNNPQVLD---VLGRSLVATGDLQ 633 Query: 278 KAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +A + ++ P P + H L ++ + + +I +E+ + Sbjct: 634 QAVNVFTRLIAQQPQAAGPLVTLADAHRLRKDNTSAEQALRKALDIQPNLLEAQ----QR 689 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEI 360 + + +A +A+ K ++ Sbjct: 690 LIALLVERKASREALALAKTVQKQRA 715 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 75/258 (29%), Gaps = 37/258 (14%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A E L + A A L G + A+ A AL + Sbjct: 153 GDLAAARRAFEAALNLDAEESDARVGLARTKLAGGAVAEARADAEAALARDAKSAEAYIV 212 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----------------------- 230 + ++ + A L + + L+ Sbjct: 213 LADAALMEGRPADAAKALESALQQRPDNVGYHFALISLLFRQDDGEAAAAKLARMAEVAP 272 Query: 231 -------ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 ++ K + + D + +LK + + A + A L+ N +A L Sbjct: 273 NHPFTRYLQAFHKYRKNQLKEARDDVMLALKSAPDFLPAHLLAGTVLMRLNDNEQARSHL 332 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALR----LEEINKESVESLVIVS-KIALEM 338 K+ + P+ +A ++ + L E N ++ L+ ++ ++ + Sbjct: 333 NKVLERAPNQALARRLLVASYLSSGQAARAMEALQPLLSEANPDA--GLLSLAGQVYMAS 390 Query: 339 GSIDQAHAKAMLAMKIAP 356 G D+A +AP Sbjct: 391 GDADKAETFFARLTTLAP 408 >gi|170719446|ref|YP_001747134.1| HemY domain-containing protein [Pseudomonas putida W619] gi|169757449|gb|ACA70765.1| HemY domain protein [Pseudomonas putida W619] Length = 412 Score = 69.6 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 131/372 (35%), Gaps = 18/372 (4%) Query: 19 IIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK 78 I V+ + V I++G Y++ + L+ L L LL + L+ ++ + Sbjct: 20 IAVAKHSGYVLISYGGFRYQSGLWAALAALVAVLALLWLLRYLVGLVLTSSGVVNPWSRR 79 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 + A+ G + +A A++ +H + L YL + A + + Sbjct: 80 NRSRRIRIAIEQGQLDLAEGRWASAQRHLHRAAEAER---QPLLYYLGAARAANEQGRKE 136 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 LE L+ E AV + + G+ + A + P V + + Sbjct: 137 DRDNLLERALERQPQAELAVALTHAQLQMDRGESDGALEALLAMQERHPHNSQVLRLLQR 196 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHD 248 Y+ +WS I L +K A L L + D+ S Sbjct: 197 LYLERGDWSALIRLLPDLRKGKVLPPEELAALEQRAWGQNLGLAATRGDDEQSARQSLER 256 Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 A + L + A A+ L + +AE +L K + +A +Y + ++ Sbjct: 257 AWQQLTAAQRQEPRLVLAYAEQLRQVGAQGEAEQVLRAALKRDYESHLARLYGLVRGDDP 316 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLL 363 +L+ A + N + L+ + +++L+ +A ++++ E+ L Sbjct: 317 ARQLQTAEGWLKANPQDPSLLLTLGRLSLQNRLWGKARDYLESSLRMERNPETCAELARL 376 Query: 364 LAQIEQANSHNT 375 LA + + N Sbjct: 377 LAGLGETERSNQ 388 >gi|301060387|ref|ZP_07201250.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300445583|gb|EFK09485.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 785 Score = 69.6 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 41/267 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +I A + A E+ +L+ A +L G LN A ++ KAL ++ + Sbjct: 460 ARILAANGKKREATEQYLSVLESDPGFVQAHVNLANILADQGYLNEAVKHYEKALTLNRE 519 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A AI + + A + N + G+ + Sbjct: 520 NANARYNLANTFFRAGRTDDAI----AQYRKALDIRPNDPSIHYNLGNAYMRNGNFEQAV 575 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYT- 300 E+L+ + + A + +L RKA + EK P HP +A + Sbjct: 576 SQYSEALRYQPDFVNARVNLGNALARSGNPRKAILQYEKALASQPDHPGAHYNLAGAFAA 635 Query: 301 ---------------HLLSENTVGKLKRALRLEE----------------INKESVESLV 329 L E+ + + L L I VE+ + Sbjct: 636 SGKTQKAVVHYKEVLRLQPEDATARFQLGLILSNSGRHSEGEEQFSIALQIKPNFVEARI 695 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ G +A A AMK+ P Sbjct: 696 ALADELAVQGKTSEAVAHYNEAMKMNP 722 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 11/162 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A WS + T ++ + N + + +G+ + +L++C Sbjct: 397 QAGYWSDSETLF----RHGLQVVPNNYVAHNGLARALEAQGETDEAIRHFETALRICPGF 452 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314 A+ L + KKR+A + + +P H +ANI +K Sbjct: 453 TDGRYNFARILAANGKKREATEQYLSVLESDPGFVQAHVNLANILAD--QGYLNEAVKHY 510 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +N+E+ + ++ G D A A+ A+ I P Sbjct: 511 EKALTLNRENANARYNLANTFFRAGRTDDAIAQYRKALDIRP 552 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 11/197 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G + ++ L + P+ + + E AI + + R Sbjct: 397 QAGYWSDSETLFRHGLQVVPNNYVAHNGLARALEAQGETDEAIRHFETALRICPGFTDGR 456 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A G + + L+ + A + A L Q +A EK Sbjct: 457 ----YNFARILAANGKKREATEQYLSVLESDPGFVQAHVNLANILADQGYLNEAVKHYEK 512 Query: 286 IWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 N +AN + + T + + + +I + + G+ Sbjct: 513 ALTLNRENANARYNLANTFF--RAGRTDDAIAQYRKALDIRPNDPSIHYNLGNAYMRNGN 570 Query: 341 IDQAHAKAMLAMKIAPR 357 +QA ++ A++ P Sbjct: 571 FEQAVSQYSEALRYQPD 587 >gi|146329028|ref|YP_001209216.1| HemY protein [Dichelobacter nodosus VCS1703A] gi|146232498|gb|ABQ13476.1| HemY protein [Dichelobacter nodosus VCS1703A] Length = 445 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 117/372 (31%), Gaps = 45/372 (12%) Query: 32 WGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG 91 +G T ++ F F +I LF + F + P + L R +K + L G Sbjct: 32 FGRYQIETHFINLVLASILFGFLFITLFRILFFIWNTPTIFSRNLKVRKKNKADRLLRGG 91 Query: 92 LMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIA---LAERQYN-----IAHEK 142 L + N A +K+ + ++Y IA A E Sbjct: 92 LNDLGVGNYKCAEKKLANGGDLAEQLGISPVIYFENAAIAADRQQAFDRRDQYFIRARET 151 Query: 143 LEM--MLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 ++ + R +S + + Q Y A V + + YV Sbjct: 152 VQAHDAVSRKVMRLTEAHSYILNHQFTQAESILNQLYQEDA-----KNSKVIAMLDEVYV 206 Query: 200 LAKEWSRA---ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 K+W RA ++ L + R D+ E+L Sbjct: 207 GKKDWERAWLHLSTLRNQLSAEVFNERKLKYAQEMVQAALHDE-----------EALSRV 255 Query: 257 DNSIMASICA--------AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + A + A A +L + + E +L + K N ++ +Y+ L N Sbjct: 256 WQHLPAELHAEKSLLLPYASALHEKGHAEEIEKLLAQQIKYNGDLDLIQVYSQLRGINFN 315 Query: 309 GKLKRALRLEEINKESVESLVIV---SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 LK + + E+ + + ++IA + A ++K+ P + F L Sbjct: 316 RALK---NMNDWASMHAENSIFLYCHAQIAYRAKDYETAARCIEASIKLHPTPQAFALWG 372 Query: 366 QIEQANSHNTDK 377 QI +A Sbjct: 373 QILEATDKPGAA 384 >gi|332290272|ref|YP_004421124.1| putative protoheme IX biogenesis protein [Gallibacterium anatis UMN179] gi|330433168|gb|AEC18227.1| putative protoheme IX biogenesis protein [Gallibacterium anatis UMN179] Length = 421 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 60/409 (14%), Positives = 131/409 (32%), Gaps = 65/409 (15%) Query: 1 MLRLIRYFFVISLVIC-SFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R++ + +I LV +S V I + S +++ L + Sbjct: 1 MFRVL-FLMIILLVGFIGGPYISGKQGYVRILTESHSIEMSITMLVIFFVIALALVYGIE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V F + ++ R K + + G + + N A K+ ++ Sbjct: 60 WVISRFFRLSSGTYNWFSVRKRRKAQQQILQGFVKMDEGNYAKAEKLIGKNAKH--SSEP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE------SCRIGDLNSA 173 L ++ + A A++ L I AT +L E + L +A Sbjct: 118 ILNFVKAAEAAQQRGDEFSANKYL-----IEATELAGSDNLIVELARTRILLQQNKLPTA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVL----------------AKEWSRAI--------- 208 + L ++P V V+ Y+ + ++ A Sbjct: 173 RTAVDSLLVLAPQNVEVLRLAVEIYLRSHAYLALDNLLPKIGKSGLYAEAEFMQLQHQVV 232 Query: 209 -TFLNQKK------------KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 L++K ++ R + ++ D D ++Y A++S K Sbjct: 233 DGLLDEKMNEDGIDGLLKWWEDQPRSRRQNSYAIVGMIRRLIDSDDHDSAYQLALDSFKR 292 Query: 256 CDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 ++S M + A+ ++ K LEK K ++ + + ++ R Sbjct: 293 IESSEMLAFVTQIARLQVA--NSSKIMKWLEKSAKSQTDAKLNCAFARAIGYLSL----R 346 Query: 314 ALRLEEINKESVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEI 360 A ++ + ++ ++ +E+ A A A +A ++I Sbjct: 347 ANEFDKAR--QAFAKILATEDKADIEVQDYTVAAYLAEKANDMAAAQQI 393 >gi|152980339|ref|YP_001352835.1| HemY protein [Janthinobacterium sp. Marseille] gi|151280416|gb|ABR88826.1| HemY protein [Janthinobacterium sp. Marseille] Length = 398 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 52/399 (13%), Positives = 109/399 (27%), Gaps = 19/399 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R+ + V+ +V+ +V + S + + F + Sbjct: 1 MRIFLWLLVLFATAIGLAVVARFNAGNVVFFYPPYRVDLSLNFFILLSVLLFFLIYAVLK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV-SQQHTFHNE 119 R P + + KG +AL L + A K Sbjct: 61 TVRVAQKMPGKVAAYRRDKQERKGNQALRESLKAYFEGRFGHAEKAAMRASDSSDNSGLA 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L+ + + +E + R L + + A + Sbjct: 121 ALIAARAAHRMQQTERRDTWLATVEEDQSLKTARLMTAIELLVDERQ---PELALDVVKE 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLE 235 ++ A W + + + +R R + Sbjct: 178 LNANGTRHIHALRMALKANQRANNWPEVLRLVRTLDKNNALHPALSSRLRELAYQDLLKN 237 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 ++ + + + AI + + +I A + + A I+EK V + Sbjct: 238 PSNDAESLRNIWWAIPAEDRVKAYV--AIHGANAFNQRGLHDDARAIIEKSMAVEWDERL 295 Query: 296 ANIY-THLLSENTVGKLKRALRLEEI---NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 Y E + L + R EE + E + + + L +A A Sbjct: 296 LRPYRASAAGEGSPALLAQIERCEEWGKTHPTDPELALTLGTLCLRQNLWGKAQRHLEQA 355 Query: 352 MKIAPRKEIF----LLLAQIEQANSHNTDKILYWTQSAL 386 + A + L LAQ+ +A H + ++ Q A+ Sbjct: 356 LSDANGARMLQEVHLKLAQLHEALGHEAEAASHYRQCAV 394 >gi|77920168|ref|YP_357983.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380] gi|77546251|gb|ABA89813.1| TPR domain protein [Pelobacter carbinolicus DSM 2380] Length = 451 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 33/296 (11%), Positives = 95/296 (32%), Gaps = 14/296 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ L+ + F++ ++ + + W + +S V+++ L Sbjct: 1 MI-LMAFVFLVLIIFFLLFYILNPQTVAVFYWFGNEFTSSLAVVVAASVLSGLLIGYLLY 59 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + ++ + + + + ++ +R++ Q E Sbjct: 60 IYGATGHLVRDWRRKRTEKRHRSVMDLYRQAMGRLVSGDLKKSRRLLLKAHGQDGTQLEV 119 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYA 177 L + ++ AE Q + A E +L+ + L+ + + A Sbjct: 120 LQAM--ARVCRAEGQPSEALEY---LLKARKQSAENLQVLFLLADTYLAADQVEDAVATY 174 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAILLIAR 232 L + PD + ++ ++ W+ A + K + R R L + Sbjct: 175 RSILAVEPDNLEALRRLRDLHMRSELWNEASDLQKRLLKKLGGTPDNQEQRIRCGLRLET 234 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + + G + D +K + + A + + + ++A + ++ ++ Sbjct: 235 ARMVLESGRADTAAADLKALVKDQPDFVAARVLLGDAWEVAGQPQEAAGVWQEGYR 290 >gi|91791752|ref|YP_561403.1| HemY-like protein [Shewanella denitrificans OS217] gi|91713754|gb|ABE53680.1| HemY-like protein [Shewanella denitrificans OS217] Length = 396 Score = 69.2 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 72/388 (18%), Positives = 145/388 (37%), Gaps = 17/388 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++ + +I + +C + V I G TS V ++ L + +L Sbjct: 1 MIKALIIVAIILIGLCVSPLFIDNTGYVYIAIGEYQIETSLIVAITALVATVIIMLLTKW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + ++ H+ + K G +++AA + PLA K + Sbjct: 61 LLGLIINLALSSKHLPLRWRQSAAKKHTLQGAIAMAAEDWPLAEKSMLKGAANGEL--PT 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179 L L+ Q A +++ A ++ T + AV S + G+ + A+ K Sbjct: 119 LNLLVAAQAAHKQKKTQ-ARDEYLASAAAEPTAQEAVSISKIRFFMQDGEFSLARMELDK 177 Query: 180 ALDISPDAPWVTEAV-VQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234 L + +P + ++ Y K+W +A+ L +K+ + E ++ + Sbjct: 178 -LTPTSKSPDAIIRISLELYPKLKDW-QALKTLLPIAQKKQLASTEIINQLTFDANSQLV 235 Query: 235 ENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A + +H +S + ++ K LIS + +L K+ K P Sbjct: 236 AQAATKNTQELDKVWHWLSKSERQDPLL---ALIYIKGLISFGLAEEGNKLLIKLVKHEP 292 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 I L++ K+ +R E + V+K+ L+ I +A + A Sbjct: 293 CGTIFEALPELVTAQDSEIRKQLMRHEASFENDASYQACVAKLCLQSRDIKEAKIRLQSA 352 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++AP+ E +L LAQ+++ NT+ Sbjct: 353 CRLAPKSEYWLALAQVQEQLGENTNAAQ 380 >gi|196230691|ref|ZP_03129552.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196225032|gb|EDY19541.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 684 Score = 69.2 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 78/229 (34%), Gaps = 11/229 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A +L + +++L + + G L A+ KAL + + Sbjct: 17 AGRLAEAEAIYRQILGVQPNHVGVLHNLGLIAVQTGRLAMAEELIRKALGLDAGNAIIHC 76 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ + Y A+ + + + L AD+G + + + Sbjct: 77 SLGEVYRTQGRPQEAMESYQRALQLRPGYPE----AASNLGLVLADQGRLSEAAAACRSA 132 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENT 307 L+ + A K L S +A ++ + PH A + +L S Sbjct: 133 LQSRPDFAPAHNILGKILGSSGDFAQAIASFQQALAIQPH--FAEAWNNLGVTYHESGQA 190 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L+ R ++N + E + ++ ++ +D+A A A+ + P Sbjct: 191 GPALEALQRAAQLNPNAPEIHNNLGRLLGDLDQLDEAIAAYRRALDLHP 239 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 71/222 (31%), Gaps = 27/222 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+++ + +A ++ + +++ ++ + + A E + Sbjct: 45 GLIAVQTGRLAMAEELIRKALGLDAGN--AIIHCSLGEVYRTQGRPQEAMESYQ------ 96 Query: 151 ATREFAVYSLYFESCR--------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 R + Y E+ G L+ A AL PD + + + Sbjct: 97 --RALQLRPGYPEAASNLGLVLADQGRLSEAAAACRSALQSRPDFAPAHNILGKILGSSG 154 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 ++++AI Q + A + + G + + +L N+ Sbjct: 155 DFAQAIASFQQALAIQPHF----AEAWNNLGVTYHESGQAGPALEALQRAAQLNPNAPEI 210 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIY 299 + L ++ +A + ++PH P+ +A + Sbjct: 211 HNNLGRLLGDLDQLDEAIAAYRRALDLHPHFPDAYNGLAQAF 252 >gi|251772048|gb|EES52620.1| protein of unknown function [Leptospirillum ferrodiazotrophum] Length = 466 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 62/447 (13%), Positives = 131/447 (29%), Gaps = 43/447 (9%) Query: 28 VSITWGNRLYRTSPFVILSILYFFL-FAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYK 86 VS P + L +L F L A + L L L ++ ++ Sbjct: 27 VSFQILPHQVLLLPQITLIVLAFSLGAALVFLIHGLSDLLGWVKNLRESRDEKRAERAQA 86 Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 I ++P A + + H E L LL + + Y A Sbjct: 87 LWKRTWTEINRSHMPQALSVLERLVALFPDHREAL--LLLGDLKRSSGDYVGAIRIHRRA 144 Query: 147 L--QIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 R A+ + Y + R+ D A + V E + + Sbjct: 145 RVFDEEDVRLILALATDYECAERVED---ALVLFREYFKKEGRNREVLEEFRRLLMREDR 201 Query: 204 WSRAITF---LNQKKKNAKEWNRNRAILLIAR---SLENADKGDMIASYHDAIESLKLCD 257 W A++ L + + + +R A+L+ R +G+ + +LK+ Sbjct: 202 WEEALSVQTALARSFEKGERRDREVALLVGLRFEVGSLLHRQGNTEGARRAFRGALKIDP 261 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT------HLLSENTVGKL 311 A + A++ I++ ++++ L++ W +Y +L N L Sbjct: 262 AFTPARLGLAEAQIAEGREKEGIENLQEGWTRT----SETLYLVRLEEFYLEKGNPDAIL 317 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQA 370 + + + + +++ +G D++ + A + L+ +I + Sbjct: 318 SLYSKALDRHPANPSLSFHKARVYNRLGMEDESLSLLESLEGEAAWGGEYYRLMGEIYEK 377 Query: 371 NSHNTDKI---LYWTQSALHAMPDPLWISDDG-YLSSVWLPLSPISKTLCYFEWKIPTKS 426 + L D + + W P +W Sbjct: 378 RHQMDLALECFRRILSLEL--PFDLPYGCRNCRTFFPEWSGRCPSCH-----QWNT---- 426 Query: 427 PEYISSENINFSLEMAYPADDLQSMLN 453 ++ A P D + L+ Sbjct: 427 --IFRTDGQVLPGSGAPPVVDPATALS 451 >gi|123788588|sp|Q3UV71|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1 gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus] Length = 942 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 586 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 645 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 646 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 702 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 756 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + E + ++++ MG +A + PR E + L Sbjct: 757 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H K L + AL DP Sbjct: 817 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 845 >gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus] Length = 942 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 586 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 645 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 646 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 702 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 756 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + E + ++++ MG +A + PR E + L Sbjct: 757 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H K L + AL DP Sbjct: 817 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 845 >gi|89074442|ref|ZP_01160919.1| hypothetical HemY protein [Photobacterium sp. SKA34] gi|89049730|gb|EAR55280.1| hypothetical HemY protein [Photobacterium sp. SKA34] Length = 396 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 53/393 (13%), Positives = 131/393 (33%), Gaps = 11/393 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++L+ + I ++ V I+ N+ S ++ ++ ++LL Sbjct: 1 MIKLLLLVLALIAGIIVGPELAGNQGYVLISTANQTIEMSLTTLVVLIVALFAVFLLLEF 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + S + R K GL+ + + A K+ + ++ Sbjct: 61 ILKRVFSISSSTRGWFSGRKVRKARIQTSAGLLKVTEGDWKPAEKLLTKSAK--FSDAPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L YL + A + E L+ ++ + + R A + Sbjct: 119 LNYLAAAEAAQGLGKTEQRDEYLKQAAELDSQNLAVALTRAKLQIRQQQFEQALATLQEV 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS----LEN 236 + P V + + Y+ ++W +T L K + A++L ++ +++ Sbjct: 179 QQDNARNPIVLGLLQECYLKLEDWKSLLTLLPLLTKAG-VITQEEALVLDEQAQCGQMQH 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + + ++ D A C K +++++ A IL K + + Sbjct: 238 LGQQNGTDGLVGYWNNMGRKDKQNPALVACFIKQMMARHADNDAYPILRDALKKSQDERL 297 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ L + + + L + + + + ++ + G+ +A A+ + Sbjct: 298 ISLVPQLNLPDRHPAIIKLQELLRQDGNNAVTHSALGQMLMAEGNWQEAKEHFERAVAVR 357 Query: 356 PRKEIFL-LLAQIEQAN--SHNTDKILYWTQSA 385 P + L+A +EQ N + A Sbjct: 358 PDMADYAHLVATLEQLNDKQGAAAASRQALELA 390 >gi|282898924|ref|ZP_06306907.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii CS-505] gi|281196178|gb|EFA71092.1| hypothetical protein CRC_00158 [Cylindrospermopsis raciborskii CS-505] Length = 862 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 96/280 (34%), Gaps = 16/280 (5%) Query: 94 SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--P 150 ++A + + A + ++ + + Y A E E LQI Sbjct: 153 ALADSGDYKKA--CEIFERSLQINPDDTITLNSYGKALADSDDYKKACEIFERSLQINPD 210 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T Y GD A ++L I+PD + + + ++ +A Sbjct: 211 NTITLNSYG--KALADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSGDYKKACEI 268 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + I L + AD GD + SL++ + + K+L Sbjct: 269 FERSLQINPD----NTITLTSYWKALADSGDYKKACEIFERSLQINPDDTITLTGYGKAL 324 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKR---ALRLEEINKESVE 326 +KA I E+ ++NP I Y L+++ K R +IN + Sbjct: 325 ADSGDYKKACEIFERSLQINPDDTITLTSYGKALADSG-DYKKACEIFERSLQINPDDTI 383 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +L K + G +A +++I P IF + A+ Sbjct: 384 TLTSYGKALADSGDYKKACEIFERSLQIQPDNYIFFIFAK 423 Score = 68.0 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 90/271 (33%), Gaps = 16/271 (5%) Query: 94 SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--P 150 ++A + + A + + + + Y A E E LQI Sbjct: 119 ALADSGDYKKA--CEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPD 176 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T Y D A ++L I+PD + + + ++ +A Sbjct: 177 DTITLNSYG--KALADSDDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEI 234 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + I L + AD GD + SL++ ++ + K+L Sbjct: 235 FERSLQINPD----DTITLTSYGKALADSGDYKKACEIFERSLQINPDNTITLTSYWKAL 290 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKR---ALRLEEINKESVE 326 +KA I E+ ++NP I Y L+++ K R +IN + Sbjct: 291 ADSGDYKKACEIFERSLQINPDDTITLTGYGKALADSG-DYKKACEIFERSLQINPDDTI 349 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +L K + G +A +++I P Sbjct: 350 TLTSYGKALADSGDYKKACEIFERSLQINPD 380 Score = 66.5 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 80/236 (33%), Gaps = 15/236 (6%) Query: 129 IALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Y A E E LQI T Y GD A ++L I+PD Sbjct: 17 ALADSGDYKKACEIFERSLQINPDNTITLNSYG--KALADSGDYKKACEIFERSLQINPD 74 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + ++ +A + + + I L + AD GD + Sbjct: 75 DTITLNSYWKALADSGDYKKACEIFERSLQINPD----NTITLTSYGKALADSGDYKKAC 130 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTH 301 SL++ ++ + K+L +KA I E+ ++NP I Sbjct: 131 EIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPDDTITLNSYGKALAD 190 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 S++ + R +IN ++ +L K + G +A +++I P Sbjct: 191 --SDDYKKACEIFERSLQINPDNTITLNSYGKALADSGDYKKACEIFERSLQINPD 244 >gi|332139554|ref|YP_004425292.1| uncharacterized enzyme of heme biosynthesis [Alteromonas macleodii str. 'Deep ecotype'] gi|327549576|gb|AEA96294.1| uncharacterized enzyme of heme biosynthesis [Alteromonas macleodii str. 'Deep ecotype'] Length = 391 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 65/375 (17%), Positives = 129/375 (34%), Gaps = 11/375 (2%) Query: 10 VISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCP 69 + +I +++ V I+ G+ + ++ + AW +L + + LS Sbjct: 14 FVVALIVGPMLLGDK-GYVLISLGSTAIEMTVISFCILVIGAVIAWYVLSRFALWALSLI 72 Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 K +A Y GL ++AA + A+K + + E + YL QI Sbjct: 73 TGSHKWFGTLGERKRKRAFYDGLHAMAAGDFESAQK---SLGKTTNGDFEGVNYLASAQI 129 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A A + A L P + A ++A + + + Sbjct: 130 AFANNDLSKARYFLVQATDFPNAKVAATVMHARIDVAEEKYDAALEKLDELDEKERENKQ 189 Query: 190 VTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V + Q +W L+ +K ++ + + E A K + Sbjct: 190 VVQLKAQILAKLGKWQVLQENLSTWRKALPKADYTAWSQRIAKGKFAEIASKQGAVELKS 249 Query: 248 DAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 + D++ A+ + L+ Q A+ L + K P+ + ++T L Sbjct: 250 YWDTLPRKLRHDDAYRAAYV--QQLLDQGMHADAQQHLVEWQKRGPNSALFPLFTQLNLP 307 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + L+ + ++E+V + ++A G A + A K+ RKE LLL+ Sbjct: 308 DASPSLRLLESWIKQDEENVALYSTLGQVAFNSGDDVLAEKALLKATKMKSRKEDLLLLS 367 Query: 366 QIEQANSHNTDKILY 380 I + +T L Sbjct: 368 AISER-HQDTATALQ 381 >gi|15603680|ref|NP_246754.1| HemY [Pasteurella multocida subsp. multocida str. Pm70] gi|12722237|gb|AAK03899.1| HemY [Pasteurella multocida subsp. multocida str. Pm70] Length = 421 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 55/180 (30%), Gaps = 14/180 (7%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M R++ + ++ L +S V I + S +++ + + Sbjct: 1 MFRVL-FLMLVLLAGLIAGPYLSGKQGYVLIETNSYNIEMSITMLVVFFVIAMAVIYGIE 59 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + F + +H +R K K GLM + + A K+ ++ Sbjct: 60 VIVTRFCRLSSDTYHWFSRRKRAKAQKQTLEGLMRMNEGDYSKAEKLIGKNAKH--SEEP 117 Query: 120 YLVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESCRIGD 169 L ++ + A A+ L +M+++ TR + D Sbjct: 118 ILNFITAAEAAQQRGDEFSANRYLLEATELAGSDNLMVELARTRILLQQGKLPAARSSVD 177 >gi|238784740|ref|ZP_04628743.1| hypothetical protein yberc0001_6000 [Yersinia bercovieri ATCC 43970] gi|238714336|gb|EEQ06345.1| hypothetical protein yberc0001_6000 [Yersinia bercovieri ATCC 43970] Length = 399 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 56/365 (15%), Positives = 117/365 (32%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L L A++++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVAFLIVEWILRRIFRTGARTRGWFMGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Q Y+ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + +S + L + +E I + + + + Sbjct: 199 RSGAYSSLLEILPAIGKVQLHTPEEIAALEQQAYIGMMNQCMAEEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + A+ LI + A+ I+ K + + L S N K Sbjct: 259 VRNEIPLQVALAEHLIECDDHDVAQQIILDGLKRQYDERLVLLIPRLKSGNPEPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A+ P + LA Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKAREAFAAALAQRPDGYDYAWLADALDKLHRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|163803690|ref|ZP_02197551.1| hypothetical protein 1103602000423_AND4_00010 [Vibrio sp. AND4] gi|159172501|gb|EDP57365.1| hypothetical protein AND4_00010 [Vibrio sp. AND4] Length = 391 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 110/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + +A + A + E +++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + +V Y +EW +AI + NQ Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168 Query: 216 KNAKEWNRNRA---ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ NR RA ++ + G+ + ++L + ASI + + Sbjct: 169 KMGKKRNRIRANISHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRVYLE 228 Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +LE K + N P IA Y HL E+ + + RA ++ Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISNVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 S ++++++ S+ A + P + F L I +A + Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKESLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|104784252|ref|YP_610750.1| hemY protein [Pseudomonas entomophila L48] gi|95113239|emb|CAK17967.1| putative hemY protein [Pseudomonas entomophila L48] Length = 412 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 122/359 (33%), Gaps = 12/359 (3%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 + V I +G Y++ + L L + ++L + L+ ++ + + Sbjct: 25 HSGYVLIAYGGFRYQSGLWAALGALVGIVLLLLVLRYLIGLVLTSTGVVNPWSRRNRVRR 84 Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 A+ G + +A A++ + + L YL + A + L Sbjct: 85 DRIAIEQGQLDLAEGRWTSAQRHLQRAA--ESARQPLLYYLGAARAANELGRVEDRDNLL 142 Query: 144 EMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 E L+ E A+ + + G+ + A + P+ V + + ++ Sbjct: 143 ERALERQPQAELAIALAHAQLQMDRGESDGALEALLAMQERYPNNAQVLRLLQRLHLERG 202 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAIL--------LIARSLENADKGDMIASYHDAIESLK 254 +WS I L +K+ A L L + D + A + L Sbjct: 203 DWSAVIRLLPDLRKHKVLPANELADLEQRAWGQNLGLAATRGEDPQAARQALERAWQQLT 262 Query: 255 LCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + A A+ L + +AE +L K +A +Y + ++ +L+ Sbjct: 263 AAQRQEPQLVLAYAEQLRQVGAQGEAEQVLRGALKRAYESHLARLYGLVRGDDPARQLQT 322 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 A + + + L+ + +++L+ +A ++++ E LA++ Sbjct: 323 AEGWLKEHPQDPSLLLTLGRLSLQNRLWGKARDYLESSLRMERNPEACAELARLLAGLG 381 >gi|117924934|ref|YP_865551.1| hypothetical protein Mmc1_1636 [Magnetococcus sp. MC-1] gi|117608690|gb|ABK44145.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 968 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 83/271 (30%), Gaps = 33/271 (12%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L + Q L + Q A + +L A + G A + + Sbjct: 4 PAAQLSQAQAYLQQGQLQQAINSYQNLLAQHPESVAAWQGIGSALLAAGQPLQAVDFFER 63 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLEN 236 AL + P A+ Y RA+ + + N + N ++L A+ Sbjct: 64 ALALDPQHYPSILALGTLYQQQGRLERAVQLFLRGAQLQPNQPLVHFNLGVVLAAQGRTE 123 Query: 237 ADKGDMIASYHD---------------------------AIESLKLCDNSIMASICAAKS 269 + + ++L+ + A A + Sbjct: 124 QAQSAYRKALALNENIPEAWLNLGNLLSRTGELQQALVCYQQALQRRPSFTQAGFGLANT 183 Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVE 326 L + + +A ILE + + NP H E+ +Y HLL R R+ Sbjct: 184 LTTLKRHTEALTILEPLCQQNPDHAEMMILYGHLLRSQNRQHQARSVFQRILAQQPNHFA 243 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + I L++G D A + A ++ P Sbjct: 244 ARYGYATILLDLGRADLALPQMQQAARLNPS 274 >gi|62182406|ref|YP_218823.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62130039|gb|AAX67742.1| HemY [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 399 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTHGWFAGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|300690778|ref|YP_003751773.1| protoheme IX synthesis protein (hemY) [Ralstonia solanacearum PSI07] gi|299077838|emb|CBJ50476.1| putative protoheme IX synthesis protein (hemY) [Ralstonia solanacearum PSI07] Length = 397 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 117/400 (29%), Gaps = 18/400 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S +L+ L A LL Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLAALLLVFVAAHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + + AL + S+ A A ++ Sbjct: 61 LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQAWDA--QRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E A + ++ L ++ D + A Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236 + ++ + K W + +K + A L + +L Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWDEVLRLTRALEKRNAIHSVLAARLKQMACETLLQ 235 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D A E S + AA + A+ I+E K + + Sbjct: 236 ERRHDADALNDFWRELTAEERRSPRIASQAALYFAQLGRTDDAKRIVEDALKAHWDGRLI 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + +++A + + + + + + +A + A+K A Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLAQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355 Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R L LAQ+ + + ++ QSAL A Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRQEESQRHYRQSALLA 395 >gi|161617050|ref|YP_001591015.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553886|ref|ZP_02347630.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168233863|ref|ZP_02658921.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244623|ref|ZP_02669555.1| HemY protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263176|ref|ZP_02685149.1| HemY protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194449801|ref|YP_002047951.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470481|ref|ZP_03076465.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197262064|ref|ZP_03162138.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200388970|ref|ZP_03215582.1| HemY protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|238912941|ref|ZP_04656778.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|161366414|gb|ABX70182.1| hypothetical protein SPAB_04883 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194408105|gb|ACF68324.1| HemY protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456845|gb|EDX45684.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197240319|gb|EDY22939.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199606068|gb|EDZ04613.1| HemY protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205321801|gb|EDZ09640.1| HemY protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205332086|gb|EDZ18850.1| HemY protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336525|gb|EDZ23289.1| HemY protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348199|gb|EDZ34830.1| HemY protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 399 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 252 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 253 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 312 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 313 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 372 Query: 369 QANSHNTDKI 378 + Sbjct: 373 DRLHQPEEAA 382 >gi|326629634|gb|EGE35977.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 399 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 111/376 (29%), Gaps = 21/376 (5%) Query: 15 ICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFH 74 I +++ + V I N TS + IL + + + R A Sbjct: 16 IVGGPMIAGHQGYVLIQTDNYNIETSVTGLAIILIVAIVVLFAIEWLLRRLFRTGAHTRG 75 Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 R + K L+ +A + K+ S + + YLL + A Sbjct: 76 WFAGRKRRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRG 133 Query: 135 QYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +++ LE + + TR + ++A+ K L+++P Sbjct: 134 DEARSNQHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPR 186 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS- 245 P V Q Y+ WS + + K +RA+L + D+ Sbjct: 187 HPEVLRLAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGS 246 Query: 246 ---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + + + A+ LI + A+ I+ K + L Sbjct: 247 EGLRTWWKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRL 306 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + N K + + + + + ++ G +A A+K P + Sbjct: 307 RTNNPEQLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYA 366 Query: 363 LLAQIEQANSHNTDKI 378 LA + Sbjct: 367 WLADALDRLHQPEEAA 382 >gi|310766126|gb|ADP11076.1| putative protoheme IX biogenesis protein [Erwinia sp. Ejp617] Length = 396 Score = 68.8 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 23/371 (6%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + +L L + + + R A R Sbjct: 21 IAGHQGYVLIQTNNWNIETSVTGMTIVLLLSLVIVLAVEWLLRRVFRTGARTRGWFTGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 K + L+ +A + K+ + YLL + A A+ Sbjct: 81 RRSARKQTHAALVKLAEGDYKQVEKL--LSRHADHAEQPMVNYLLAAEAAQQRGDETRAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ + L+I+P P V Sbjct: 139 QHLERASELNDDDPLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247 Q YV + W + L K + +R + L S AD+G Sbjct: 192 LAEQAYVRTQAWGALLNILPAMEKIQPGDATHRLELQQQCWLGLMSQAMADQGSDGLKRW 251 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 +S K N + A LI + A+ I+ + K + + + L + N Sbjct: 252 WQNQSRKTR-NETALQVAMADHLIVCDDHDTAQKIVLEGLKRHFDERLVMLMPRLKTGNP 310 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 K + + + + + ++ ++ G + + A++ P + LA Sbjct: 311 EQLEKALRQQIKQHGATPLLHSTLGQLLMQHGEWELSSEAFRAALQQRPDAFDYAWLADT 370 Query: 368 EQANSHNTDKI 378 + Sbjct: 371 LDRQHKPEEAA 381 >gi|261345252|ref|ZP_05972896.1| protein HemY [Providencia rustigianii DSM 4541] gi|282566950|gb|EFB72485.1| protein HemY [Providencia rustigianii DSM 4541] Length = 399 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 115/391 (29%), Gaps = 21/391 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ F V+ + +++ + V I + TS ++ F + L Sbjct: 1 MIKVFILFIVLIAGVILGPLLAGHQGYVFIRTDDYDITTSVTSLVLCFILLQFVLLFLGW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R F+S + L Y K + L+ +A ++ K+ S Sbjct: 61 CYRRFMSTTSRTKGWLTGHKYHKAHTQTQKALLKLAEGDLEQVEKLMS--KHADYSQQPV 118 Query: 121 LVYLLEVQIALAERQY--------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + YL+ + A A L + +R G++ + Sbjct: 119 INYLMAAEAAQQRGDSYRTHQYLDRAAEAAGRDQLPVDISRV-------RIQLAEGEIYA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ + L+ +P P + Q Y+ + + I L K +L + Sbjct: 172 ARNGIDRLLEQAPRHPAILRLAEQAYLSSGAYQALIELLPIMAKVQLHSEDELELLKLKA 231 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSI----MASICAAKSLISQNKKRKAEVILEKIWK 288 ++ + + K + A+ LI AE I+ K Sbjct: 232 YKGLMNQFMAESGSDGLKKWWKNQPRKVRHEIPLQAFLAEHLIECGDTVSAEKIIVDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + L SE K L L + + + +IAL+ ++A + Sbjct: 292 QQYDERLLLLVPKLNSEQPEVIEKILLGLVKHAGATALLNSTLGQIALQHAQWEKAESYF 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+ LA + Sbjct: 352 KAALAQRFDAYDAAWLADAYDKLHKPNEAAK 382 >gi|205354500|ref|YP_002228301.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274281|emb|CAR39301.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] Length = 383 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 6 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAIVVLFAIEWLLRRLFRTGAHTRGWFAGRK 65 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A ++ Sbjct: 66 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARSN 123 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 124 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 176 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 177 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 236 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + A+ LI + A+ I+ K + L + N Sbjct: 237 WKNQSRKTRHQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 296 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 297 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 356 Query: 369 QANSHNTDKI 378 + Sbjct: 357 DRLHQPEEAA 366 >gi|297200375|ref|ZP_06917772.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197709493|gb|EDY53527.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 1082 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 112/301 (37%), Gaps = 24/301 (7%) Query: 110 VSQQHTFHNEYL-------VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 + L ++L + ++Y A E+ + +++ + A Y Sbjct: 511 AAADLLLARPGLDPAGRAEAHVLRGRELRRRQEYGQALEEYDRAVELDPLQPLAHYGRGL 570 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + D +A +A++++PD W+ + + LA +A+ + Sbjct: 571 THQLLEDYPAALTALDRAVELAPDNGWIIAERAETHRLASHLEQAVVDYTRAVALDPT-- 628 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + L R++ G + S D +L + + A + A+ ++ KA Sbjct: 629 --DDVALAGRAVCRHGLGMLDESLADFNRALSIDPEYLWALVRRARLHRARGDVDKAFAD 686 Query: 283 LEKIWKVNPHPEIA-------NIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 L++ +++ P++A + Y E V +L RA+ LE +L + Sbjct: 687 LDRAYELA--PDLAWIASERGDAYRIAGRYEEAVTELGRAVSLE---PGYASALASRGQA 741 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 E+G D+A A A+++ P L++ + + + L + A+ A P W Sbjct: 742 LYELGRYDEASAAFDGAVRLIPDYAWALVMRSRARRRLDDEEGALADLRRAVEAEPGVDW 801 Query: 395 I 395 I Sbjct: 802 I 802 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 80/234 (34%), Gaps = 37/234 (15%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 GD++ A +A +++PD W+ Y +A + A+T L + + Sbjct: 672 RLHRARGDVDKAFADLDRAYELAPDLAWIASERGDAYRIAGRYEEAVTELGRAVSLEPGY 731 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L +R + G + +++L + A + +++ + + A Sbjct: 732 ----ASALASRGQALYELGRYDEASAAFDGAVRLIPDYAWALVMRSRARRRLDDEEGALA 787 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 L + + P + +E + +++ Sbjct: 788 DLRRAVEAEP-----------------------------GVDWIECELGLAQQ--GAHRF 816 Query: 342 DQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 +A A + P +I L LA I Q ++ ++ L++ A+ A P+ W Sbjct: 817 AEAEASFHRVLSRDPDYKIALAGLAAIVQT-RNSYEEALHYLDRAVTADPEFAW 869 Score = 38.4 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 40/149 (26%), Gaps = 17/149 (11%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY---------------NIAHEKL 143 + A M S ++ L L A + A Sbjct: 764 DYAWALVMRSRARRRLDDEEGALADLRRAVEAEPGVDWIECELGLAQQGAHRFAEAEASF 823 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +L + A+ L A Y +A+ P+ W + + Sbjct: 824 HRVLSRDPDYKIALAGLAAIVQTRNSYEEALHYLDRAVTADPEFAWAYGERARVCLAIGR 883 Query: 204 WSRAITFLNQ--KKKNAKEWNRNRAILLI 230 ++A+ L++ + R A+ L+ Sbjct: 884 TAQALADLDRCVELDPGTTRERAEAVRLL 912 >gi|53718659|ref|YP_107645.1| putative porphyrin biosynthesis related protein [Burkholderia pseudomallei K96243] gi|76810797|ref|YP_332643.1| putative porphyrin biosynthesis related protein [Burkholderia pseudomallei 1710b] gi|126451474|ref|YP_001065359.1| putative hemY protein [Burkholderia pseudomallei 1106a] gi|134281025|ref|ZP_01767734.1| putative hemY protein [Burkholderia pseudomallei 305] gi|167737629|ref|ZP_02410403.1| hypothetical protein Bpse14_06160 [Burkholderia pseudomallei 14] gi|167814762|ref|ZP_02446442.1| hypothetical protein Bpse9_06442 [Burkholderia pseudomallei 91] gi|167823217|ref|ZP_02454688.1| hypothetical protein Bpseu9_06038 [Burkholderia pseudomallei 9] gi|167844778|ref|ZP_02470286.1| hypothetical protein BpseB_05763 [Burkholderia pseudomallei B7210] gi|167900344|ref|ZP_02487745.1| hypothetical protein Bpse7_41885 [Burkholderia pseudomallei 7894] gi|167901769|ref|ZP_02488974.1| hypothetical protein BpseN_05780 [Burkholderia pseudomallei NCTC 13177] gi|167918041|ref|ZP_02505132.1| hypothetical protein BpseBC_05768 [Burkholderia pseudomallei BCC215] gi|226194427|ref|ZP_03790025.1| putative hemY protein [Burkholderia pseudomallei Pakistan 9] gi|242315632|ref|ZP_04814648.1| putative hemY protein [Burkholderia pseudomallei 1106b] gi|254190783|ref|ZP_04897290.1| putative hemY protein [Burkholderia pseudomallei Pasteur 52237] gi|254196511|ref|ZP_04902935.1| putative hemY protein [Burkholderia pseudomallei S13] gi|254259359|ref|ZP_04950413.1| putative hemY protein [Burkholderia pseudomallei 1710a] gi|254298290|ref|ZP_04965742.1| putative hemY protein [Burkholderia pseudomallei 406e] gi|52209073|emb|CAH35013.1| putative porphyrin biosynthesis related protein [Burkholderia pseudomallei K96243] gi|76580250|gb|ABA49725.1| putative porphyrin biosynthesis related protein [Burkholderia pseudomallei 1710b] gi|126225116|gb|ABN88656.1| putative hemY protein [Burkholderia pseudomallei 1106a] gi|134247331|gb|EBA47416.1| putative hemY protein [Burkholderia pseudomallei 305] gi|157808151|gb|EDO85321.1| putative hemY protein [Burkholderia pseudomallei 406e] gi|157938458|gb|EDO94128.1| putative hemY protein [Burkholderia pseudomallei Pasteur 52237] gi|169653254|gb|EDS85947.1| putative hemY protein [Burkholderia pseudomallei S13] gi|225933512|gb|EEH29501.1| putative hemY protein [Burkholderia pseudomallei Pakistan 9] gi|242138871|gb|EES25273.1| putative hemY protein [Burkholderia pseudomallei 1106b] gi|254218048|gb|EET07432.1| putative hemY protein [Burkholderia pseudomallei 1710a] Length = 396 Score = 68.4 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 123/398 (30%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + L Sbjct: 3 LRGIIWLAVLFAIAAALATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++ AL L ++ A A K + Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRAEKAARDALAVDANQSAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + E + ++ L R D A Sbjct: 123 SLV-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K W+ + + + + + A+ L ++ E+ Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236 Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++ + + + + AA+ LI+ ++++A I+E N + Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A + + L + ++ + +A + A+ Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + ++ +SAL Sbjct: 354 KLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391 >gi|269925204|ref|YP_003321827.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC BAA-798] gi|269788864|gb|ACZ41005.1| Tetratricopeptide TPR_2 repeat protein [Thermobaculum terrenum ATCC BAA-798] Length = 2240 Score = 68.4 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 92/238 (38%), Gaps = 13/238 (5%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 +++ A++ + + + Y+L GDL+ A +KA+DI P+ Sbjct: 1392 QDMGRFDDAYDLFQRSISLSPDNPRYHYNLGILMRSQGDLHDAINQVSKAIDIQPNNAEW 1451 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y +A + + + + +R + +IAR + D+ + A Sbjct: 1452 HSTLADLYFQIGMLDKARKEAEEASRLDPDNYRYHRQLSVIAR-----ETQDLDQALASA 1506 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304 ++LK + A A + + A + ++ ++P H +I +IY L Sbjct: 1507 RQALKCAPDEPQAIAELASVQEALGELTSALALYKQAAMLDPLNADYHRKIGSIYRQL-- 1564 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 T L+ + ++ + +SL + ++ L+ D+A A ++AP + Sbjct: 1565 GKTQESLQSLQKAIDLAPNAPDSLFEIGQLYLQTDRFDEACKVLQKATQLAPDNPTYR 1622 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 54/306 (17%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISP 185 ++ A E LQI + L Y + R D A KA +I P Sbjct: 1748 TYNMVGNHSEALINYERALQIRPDDGLTLRRLGSTYRQMKRFKD---AISILQKAAEIDP 1804 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILL-----IARSLENA 237 P + + Y + A+ K + +NRN AI ++E Sbjct: 1805 QDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRNAAIAHQDLKQTKLAIEKL 1864 Query: 238 DKG----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + E+++L + + + AA+ K Sbjct: 1865 QHAVMLEPYQPTWHFELGALLEASEQYEEALAEYNEAMQLNPDGAIYAFRAAEVCERMGK 1924 Query: 276 KRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEE---INKESVES 327 K +A L+ K+ P ++ +Y + A L + I ES E+ Sbjct: 1925 KEEAIECLKYALKLEPRNYEWRFKLGCMYLDMEYFAPA-----AEELAKSLEIEPESAEA 1979 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQIEQANSHNTDKILYWT 382 + + + + DQA + M A KI P +++ L++ ++ + + Sbjct: 1980 HLKLGIALINLEQYDQALERLMDAAKIEPNNFDVHEQLSLVMEKLGRPEEAISHIAQALL 2039 Query: 383 QSALHA 388 + A Sbjct: 2040 LDSSRA 2045 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 84/240 (35%), Gaps = 14/240 (5%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAP 188 AE +Y +A ++ E+ ++ + L C DL +A + + D Sbjct: 507 EAEGKYELACQQYELAVERDPSNVNYRRSFGLALALCNKYDLAAA-KLREVVDILKSDCA 565 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + Y + +A+ ++A + + A+ L + A GD + + Sbjct: 566 LTQHELGNIYKIQGRLQQALEQF----QDAATMSPSSAVYLTSLGSVLAACGDDQGAERE 621 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLL 303 +L L N A+ A L Q K A +K ++ P H I L Sbjct: 622 LRRALDLDPNYAPAANELAAVLERQGKLDLALANYQKATEIQPEEPLYHRNAGAILRKLG 681 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + E++ + ++ + + ++MG A A++ +P + + L Sbjct: 682 RVEEAER--ELVTAIELDSKYADAYNELGSLYMDMGKHLAALENFQKAIQYSPEQPEYYL 739 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 41/194 (21%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 AI L + A + R + A +LE A G + + E+++L D ++ + Sbjct: 1092 EDAIKTLERAL--ALDPRRADVYVTYAEALEIA--GKRDEAIQNLQEAVRLDDTNVSYKV 1147 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK--------- 310 L + + AE +L K +P H E+ +Y L + + Sbjct: 1148 KLGSMLRRYGEYQDAEDLLLKCTDDHPESAQAHSELGMLYMDLGLQEKALRHHEIACSLD 1207 Query: 311 ----------------LKRALR-----LEEI--NKESVESLVIVSKIALEMGSIDQAHAK 347 LKR L I N E+ E + + + + ++A Sbjct: 1208 DRSPEYKYRMALALIHLKRYAEAIDTILTAIQANPEAAEYYHALGRAHMGLSQYEEAVQA 1267 Query: 348 AMLAMKIAPRKEIF 361 A++IAP + Sbjct: 1268 FEKAVRIAPSVAQY 1281 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 83/271 (30%), Gaps = 34/271 (12%) Query: 148 QIPATREFAVYSL--YFESCRIGDLNSAQRYA--------------TKALDISPDAPWVT 191 P R Y L R L SA+ A AL I + Sbjct: 1617 DNPTYRF--HYGLAIMRLKEREDKLRSARLLASSSQVSYAQAIEEIEAALRIEHNHADWH 1674 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + Y L ++ A+ + A + + + A+ + D + Sbjct: 1675 NTLGELYELVDDYESALHHF----RWAADIDSDCALFQYNQGRIYKKLRDYDRAIRAFQM 1730 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L A + +A + E+ ++ P+ L +T ++ Sbjct: 1731 AVRLDPEFAQAYSELGATYNMVGNHSEALINYERALQIR--PDDGLTLRRL--GSTYRQM 1786 Query: 312 KRAL-------RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 KR + EI+ + E + G +A A+ A+K+ P + Sbjct: 1787 KRFKDAISILQKAAEIDPQDPEIYNELGLAYRAQGKHREALAEFEHALKLRPDNATYNRN 1846 Query: 365 AQIEQANSHNTDKILYWTQSALHAMP-DPLW 394 A I + T + Q A+ P P W Sbjct: 1847 AAIAHQDLKQTKLAIEKLQHAVMLEPYQPTW 1877 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 88/314 (28%), Gaps = 63/314 (20%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMM 146 G+++ + LA + Y + + + A A + M Sbjct: 844 GMVAEQKGDYILA--LERYRKALELSPDNEHFIVAVSRSARLSGNLLQADELIRDAFSRM 901 Query: 147 LQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKE 203 + E E R G+ A KA +SP+ W +Y+ + Sbjct: 902 PESALIHDELGT----IEFVR-GNYQKASECFLKATKLSPETSDFWAHLGKAYRYLTRLD 956 Query: 204 WSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A + + N + A+LLIA + + ++ +L + Sbjct: 957 --EAKEACEEALRLDANNPVAHHETAMLLIAL-------NEEEEALSHFRKAARLDARNA 1007 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI----------------- 298 ++ + + LEK ++P H E+ + Sbjct: 1008 QYALDLGACASKLGRVNEGLTWLEKALSLDPNNGQAHAELGMLMGSRGQWEEALAHFRAS 1067 Query: 299 ---------YTHLLS------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 Y H+ + T +K R ++ + V ++ G D+ Sbjct: 1068 LLIDEQNVDYLHMYGIACLHTDATEDAIKTLERALALDPRRADVYVTYAEALEIAGKRDE 1127 Query: 344 AHAKAMLAMKIAPR 357 A A+++ Sbjct: 1128 AIQNLQEAVRLDDT 1141 Score = 36.8 bits (84), Expect = 9.0, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 93/288 (32%), Gaps = 52/288 (18%) Query: 123 YLLEVQIALA-ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YLL I A E L+ ++Q A + L + + GD A KAL Sbjct: 805 YLLNAAIVQRKAGMLEDAEESLKKVIQNNPGLAPAYFELGMVAEQKGDYILALERYRKAL 864 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++SPD AV + L+ +A + E A++ +G+ Sbjct: 865 ELSPDNEHFIVAVSRSARLSGNLLQADELIRDAFSRMPES----ALIHDELGTIEFVRGN 920 Query: 242 MIASYHDAIESLKLCD---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + +++ KL + W + Sbjct: 921 YQKASECFLKATKLSPETSDF---------------------------WAH-----LGKA 948 Query: 299 YTHLLS-ENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y +L + + ALRL+ N E+ +++ + + ++A + A ++ Sbjct: 949 YRYLTRLDEAKEACEEALRLDANNPVAHHETAMLL----IALNEEEEALSHFRKAARLDA 1004 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV 404 R + L + ++ L W + AL DP ++G + Sbjct: 1005 RNAQYALDLGACASKLGRVNEGLTWLEKALS--LDP----NNGQAHAE 1046 >gi|37528464|ref|NP_931809.1| putative protoheme IX biogenesis protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787902|emb|CAE17019.1| HemY protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 412 Score = 68.0 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 48/371 (12%), Positives = 111/371 (29%), Gaps = 21/371 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + I L R + + R Sbjct: 21 IAGHQGYVLIQTDNYNIETSVTGLFIIFVLLQLVLCLFGWCYRRVIRTGSRTRGWFLGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + L+ +A + ++ + + + YLL + A + Sbjct: 81 RSRAHAQTKAALLKLAEGDFKQVEQLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR G++++A+ K L+ + P V Sbjct: 139 QYLERAAEVADNNQLPVDITRV-------RIQLTQGEIHAARHGVDKLLNQASRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Q Y+ + + I L +K + + ++ R I + + Sbjct: 192 LAEQAYMKSGAYQSLIDILPVMEKIHLHDELQIHKLRQQAYIGLMNQYMAEQGSEGLKRW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + + + ++ LI + A+ I+ + K + + L SE+ Sbjct: 252 WHDQSRKIRHDVALQVAISEHLIECDDHETAQKIILESLKRQYDERLLLLIPRLKSEDPK 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + + + + ++AL G ++A A+ P + LA Sbjct: 312 PIQNALDHQLKQHGSTPLLNSTLGQVALRHGEWEKAVKDFKTALAQRPDAHDYAWLADAL 371 Query: 369 QANSHNTDKIL 379 + Sbjct: 372 DKLRKPEEAAQ 382 >gi|241663750|ref|YP_002982110.1| HemY domain-containing protein [Ralstonia pickettii 12D] gi|240865777|gb|ACS63438.1| HemY domain protein [Ralstonia pickettii 12D] Length = 397 Score = 68.0 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 43/365 (11%), Positives = 101/365 (27%), Gaps = 21/365 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S +L+ L L+ Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLFYPPYRVEMSLNFVLAALLATFVVLHLVMR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + K AL + S+ A A + Sbjct: 61 LFHHVAGMPARAAAYRERNRILKASAALREAMESLFAGRFGHAERQAREAQA--WEPQRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E + A + ++ L ++ D A Sbjct: 119 TAALIGARAAHRMQETERRDAWMAEVASPDREQAKLVSMAELLVDAR---DAEGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + ++ + K W + +K + +L AR + A Sbjct: 176 QLQSQGSRQIQAQRIALRAHQHLKNWGEVLRLTRALEKRNAIHS-----VLAARLKQMAC 230 Query: 239 KGDMIASYHDAIESLKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + HDA + AA + A+ I+E K + Sbjct: 231 ETLLAERRHDADALNSFWRELTPEERRSPRIASQAALYFAQLGRTDDAKRIVEDGLKAHW 290 Query: 292 HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + Y + + +++A + + + + + + +A + Sbjct: 291 DGRLIRRYADCAVPGKALPLIQQAEKWLGQHPVDADLFYTLGMLCFKEQLWGKAQSSLES 350 Query: 351 AMKIA 355 A+K A Sbjct: 351 ALKYA 355 >gi|254181384|ref|ZP_04887981.1| putative hemY protein [Burkholderia pseudomallei 1655] gi|184211922|gb|EDU08965.1| putative hemY protein [Burkholderia pseudomallei 1655] Length = 396 Score = 68.0 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 122/398 (30%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + V V I + S + + L Sbjct: 3 LRGIIWLAVLFAIAAVLATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++ AL L ++ A A K + Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRAEKAARDALAVDANQSAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + E + ++ L R D A Sbjct: 123 SLV-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K W+ + + + + + A+ L ++ E+ Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236 Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++ + + + + AA+ LI+ ++++A I+E N + Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A + + L + ++ + +A + A+ Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + ++ +SAL Sbjct: 354 KLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391 >gi|329297025|ref|ZP_08254361.1| putative protoheme IX biogenesis protein [Plautia stali symbiont] Length = 398 Score = 68.0 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 107/371 (28%), Gaps = 21/371 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 V+ + V I N TS + IL L +L+ + A R Sbjct: 21 VAGHQGYVLIQTDNWNIETSVTGLAIILILSLLVILLVEWILPRLFRTGARTRDWFTGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + LM +A + K+ S + YLL + A A+ Sbjct: 81 RRSAQRHTQSALMKLAEGDYRHVEKLLSKNADHA--DQPVANYLLAAEAAQQRGDEIRAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ + L+++P P V Sbjct: 139 QHLERAAELSENDTIPVEITRV-------RLQLARNEDHAARHGIDRLLEVAPRHPEVLH 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH----D 248 Q Y+ W + L +K R L L ++ Sbjct: 192 LAEQAYIRTGAWGALLDILPSMQKAQINDENQRNALQQQAWLGLMNQAMADQGSEGLKKW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + A+ LI + A+ I+ + K + + + S + Sbjct: 252 WQNQSRKTRQETALQVAMAEHLIECDDPDTAQSIVLEGLKRQYDDRLVLLMPRIKSGDPQ 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ + G QA A+ P + LA + Sbjct: 312 ALEKALRQQIKQHGATPLLHSTLGQLLMRHGEWQQAAEAFQQALAQRPDGFDYAWLADVY 371 Query: 369 QANSHNTDKIL 379 D Sbjct: 372 DRLHRPEDAAK 382 >gi|148654849|ref|YP_001275054.1| hypothetical protein RoseRS_0687 [Roseiflexus sp. RS-1] gi|148566959|gb|ABQ89104.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1] Length = 2262 Score = 68.0 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 89/259 (34%), Gaps = 12/259 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 +Y + + ++ + + + A + E ++ + Y L Sbjct: 1915 AARSAYARAIQLAPDNADYRHAQARLLIRQGRTAEARQVFEEAVKREPHQGAWRYELAEL 1974 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GDL + + YA A+ ++PD P +V+ + E A + + + Sbjct: 1975 LRQQGDLTAIEHYAA-AVQLAPDEPRHWLGLVEGLIARHERDAARETVERALLRFGD--- 2030 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L A +GD+ + + + + ++ + + A +L Sbjct: 2031 -NPALHSAAGAIYEAQGDIERAAWHYGRAFERDPQNAGNCWRFGRAQLELGRLDAARELL 2089 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E+ ++P H IA + H + ++ L + R E+ + + +++ + Sbjct: 2090 ERALALDPDSADAHAAIARFFAH--TNDSRAALIHSQRAAELRPDEPAFQIQLAEALTHL 2147 Query: 339 GSIDQAHAKAMLAMKIAPR 357 D+A A++ P Sbjct: 2148 RRFDEARQALERALQRIPD 2166 Score = 43.8 bits (102), Expect = 0.072, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 79/267 (29%), Gaps = 19/267 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF 155 N A + + Q ++ L LL + A L + P + E Sbjct: 711 TGNALAAYRAAVSLDPQCDAYHRRLGALLR-----DCGDDDGAAAALRTALELRPDSAET 765 Query: 156 AVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 Y E R G+ A +A ++P +P A+ Y A L Sbjct: 766 --YGELAELLWRSGESEKALDACRRAYALAPTSPDHARALGLAYHRVGRARDAERTLRDA 823 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 A + RA L + A+ + L + A L+ + Sbjct: 824 LALAPD----RADLHFDYGMVAESIEQWDAALAAYERAAMLAPQRADYARAAGALLLRRG 879 Query: 275 KKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVI 330 + ++A +L + P H+ + + R ++ + ES Sbjct: 880 ELKRARTLLAGALRRARRDPETLFQTGLLHVAAGAWHLAARSFQRAVRLSGGARYES--A 937 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + L +G + A A A+ P Sbjct: 938 LGRAYLRLGRAEDACAALERALHTNPD 964 Score = 43.4 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 81/274 (29%), Gaps = 22/274 (8%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G L G + ++ L + LA + + A E L Sbjct: 1769 GRILLDQG----------ETAAARAELTAALVDPAHVQARLFLGRACLALNEPHPAIEAL 1818 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 E +++ +L G A A +A+ + + + Y + Sbjct: 1819 EQAVELRPDHAPTAAALSLAYAAAGRRERAIAAAQRAVRLDSSVGAHHQVLATLYAASGR 1878 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + A L + A G + A+ +++L ++ Sbjct: 1879 FQEARAALINALTLQPDV----AAWHAQMGEICQQMGLIDAARSAYARAIQLAPDNADYR 1934 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLE 318 A+ LI Q + +A + E+ K PH E+A + L + + ++ Sbjct: 1935 HAQARLLIRQGRTAEARQVFEEAVKREPHQGAWRYELAEL---LRQQGDLTAIEHYAAAV 1991 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++ + + + + + D A A+ Sbjct: 1992 QLAPDEPRHWLGLVEGLIARHERDAARETVERAL 2025 >gi|261401612|ref|ZP_05987737.1| HemY family protein [Neisseria lactamica ATCC 23970] gi|313668742|ref|YP_004049026.1| HemY protein [Neisseria lactamica ST-640] gi|269208317|gb|EEZ74772.1| HemY family protein [Neisseria lactamica ATCC 23970] gi|313006204|emb|CBN87666.1| putative HemY protein [Neisseria lactamica 020-06] Length = 407 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 120/398 (30%), Gaps = 14/398 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y DV + G + R + + L + AW LF Sbjct: 1 MKTVVWIVVLFAAAVGLALASGIYTGDVFVVVGQTMLRINLHAFVLGLLIAVAAWYFLFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 L+ P L R K AL ++ A S V N Sbjct: 61 FIIGVLNIPEKLRRSGSARKGRKAALALNKAGLAYFEGRFEKAELEASRVLGNKEAGDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P ++ + Y L E + D +A+ Sbjct: 121 TLALMLGAHAAGQMENTELRDRYLAEIAKLPEKQQLSRYLLLAESALNRRDYEAAEANLH 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++ + ++ + + + + K + ++ Sbjct: 181 AAAKMNAGLTRLVRLQLRYAFDRGDVPQVLAKTEKLSKAGALGKSE---MERYQNWAYRR 237 Query: 239 KGDMIASYHDAIESLKLCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 A LK +S+ S+ A+ A + + + N P + Sbjct: 238 LLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYRRLGLYADAVKWVRQHYPQNRLPGL 297 Query: 296 ANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + ++A+ + ++ L+ + ++A +A + Sbjct: 298 LEAFVGSVRFLDERGQQKAIDFADAWLQDQPDNALLLMYLGQLAYGRKLWGKAKGYLEAS 357 Query: 352 MKIAPRKEIFLLLAQI--EQANSHNTDKILYWTQSALH 387 + + P L+LA++ E + + A+ Sbjct: 358 IALKPSIPARLVLAKVFDETGETQKAEAQRNLVLEAVS 395 >gi|307132978|ref|YP_003884994.1| putative protoheme IX synthesis protein [Dickeya dadantii 3937] gi|306530507|gb|ADN00438.1| predicted protoheme IX synthesis protein [Dickeya dadantii 3937] Length = 398 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 125/387 (32%), Gaps = 13/387 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML++ F V+ I +++ + V I N TS ++ +L FL A++ + Sbjct: 1 MLKVFLLFVVLIAGIVVGPMLAGHQGYVLIQTDNYNIETSVTGLVIMLVLFLLAFLAVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R A R + + L+ + + K+ + + Sbjct: 61 LLRRVFRTGARTRGWFIGRKRTRARQQTKAALLKLTEGDYLQVEKLLTRNADHA--EQPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATK 179 + YLL + A + LE +I T + V + + ++A+ + Sbjct: 119 VNYLLAAEAAQQRGDEFRTRQYLERAAEIADTNQLPVDITRVRIQLARNEDHAARHGVDR 178 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------NAKEWNRNRAILLIAR 232 L+++P P V Q ++ +S + L +K + E + I L+ + Sbjct: 179 LLEVAPRHPEVLRLAEQAFLRTHAYSALLDILPAMRKTRLHDESHLDELQQRATIGLMDQ 238 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ +G + ++ + A+ LI + A+ I+ K Sbjct: 239 AM---AEGGSEGLKQWWKNQPRKVRQALPMQVAMAERLIVCDDHVTAQDIIVDGLKQQFD 295 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + L + K + + + + ++ + G QA A+ Sbjct: 296 YRLVQLIPRLNAGQPEPLEKLLRLRLKQHNDDALLHSTLGQLLAKHGEWQQASDAFSAAL 355 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKIL 379 + P + A D Sbjct: 356 ALRPDAYDYAWCADAFDRLKRPEDAAR 382 >gi|188532366|ref|YP_001906163.1| putative protoheme IX biogenesis protein [Erwinia tasmaniensis Et1/99] gi|188027408|emb|CAO95255.1| Protein HemY [Erwinia tasmaniensis Et1/99] Length = 396 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 119/371 (32%), Gaps = 23/371 (6%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ IL L + + + R L A R Sbjct: 21 IAGHQGYVLIQTDNWNIETSVTGLVIILLLSLVVILSVEWLLRRMLRTGARTRGWFTGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 K L+ +A + K+ S+ + + YLL + A A+ Sbjct: 81 RRSARKQTNAALIKLAEGDYKQVEKLLSHHADHA--EQPMVNYLLAAEAAQQRGDEKRAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + +E + + TR + ++A+ + L+I+P P V Sbjct: 139 QHMERASELNDGDPLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247 Q Y+ + W + L K + +R + L S AD+G Sbjct: 192 LAEQAYIRTQAWGALLNVLPAMEKIQLGDAAHRLELQQQCWLGLMSQAMADQGSEGLKRW 251 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 +S K + A LI + A+ I+ + K + + + L + N Sbjct: 252 WQNQSRKTRHE-TTLQVAMADHLIVCDDHDTAQKIVLEGLKRHYDERLVLLMPRLKTGNP 310 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 K + + + + + ++ ++ G +QA A++ P + LA Sbjct: 311 EQLEKMLRQQIKQHGATPLLHSTLGQLLMKHGEWEQASEAFRAALQQRPDAFDYAWLADT 370 Query: 368 EQANSHNTDKI 378 + Sbjct: 371 LDRQHKTEEAA 381 >gi|68249301|ref|YP_248413.1| HemY [Haemophilus influenzae 86-028NP] gi|145635730|ref|ZP_01791424.1| HemY [Haemophilus influenzae PittAA] gi|68057500|gb|AAX87753.1| HemY [Haemophilus influenzae 86-028NP] gi|145266994|gb|EDK07004.1| HemY [Haemophilus influenzae PittAA] Length = 428 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|328952032|ref|YP_004369366.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 599 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 108/330 (32%), Gaps = 56/330 (16%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHT-----FHNEYLVYLLEVQIALAERQYNIAHEK 142 L T L+ ++P A E + L Q L A Sbjct: 32 LATALVMSGCQSLPPADSARIPGKIDRLPPTIQSPKEAYKHYLNAQYYLFTGNLEDALRS 91 Query: 143 LEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 E +Q P + + + + R GD+ A + KA+ + P+ + + + Sbjct: 92 YEAAIQCDPKSAQLEIE-MAALLIRKGDIKEALAHLEKAISLDPNHLEAHQLLAGLHTGM 150 Query: 202 KEWSRA--------------------ITFLNQKK----------KNAKEWNRNRAILLIA 231 + A + L+ ++ KN + N ++ I L Sbjct: 151 NQLREATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNLLKNLIKKNPDQFIALFY 210 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VIL---- 283 + G + A+ + ++L + A + + + +A+ IL Sbjct: 211 LGKCYIELGQLTAAKKEFQQALHKQPEFLPAMLELGFVYELEKRYSQAKTMYRRILRHDP 270 Query: 284 --EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ W + +Y LL++ L+ ++ I+K E+ + + + E Sbjct: 271 DNQRAWAS-----LGRLY--LLNDQYTEALQAFGEIKRISKNEPETALRIGLLFFEQKYF 323 Query: 342 DQAHA--KAMLAMKIAPRKEIFLLLAQIEQ 369 D A + +L + P + F L A +E+ Sbjct: 324 DDAIREFREVLISRKGPDQARFFLAAALEE 353 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 48/301 (15%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A+K + ++ L + E++Y+ A +L+ + A Sbjct: 219 GQLTAAKKEFQQALHKQPEFLPAMLEL--GFVYELEKRYSQAKTMYRRILRHDPDNQRAW 276 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 SL A + + IS + P + + K + AI + + Sbjct: 277 ASLGRLYLLNDQYTEALQAFGEIKRISKNEPETALRIGLLFFEQKYFDDAIREFREVLIS 336 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 K ++ R L + +KGD++A+ + + + ++ I A + A L Q K Sbjct: 337 RKGPDQARFFL----AAALEEKGDLVAAMREYEQISRQSESYIPARLRMAYILGRQKKIS 392 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRL------------------ 317 + I++ + P+ ++Y L + E +K L Sbjct: 393 QGIKIIKDSLVLF--PKNGDLYLTLAAFYEEEQEYVKAIETLNQALENTVNPSEVYFRLA 450 Query: 318 --EEINKESVESLVIV----------SKI--------ALEMGSIDQAHAKAMLAMKIAPR 357 + KE+ ES ++ ++ A + ++D+A A+ I P Sbjct: 451 VVYDKKKENAESQRLIKKVLELEPNNAEALNFLGYMYACQGANLDEAERLIQTALAIKPD 510 Query: 358 K 358 Sbjct: 511 A 511 >gi|315185805|gb|EFU19571.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 654 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 78/233 (33%), Gaps = 7/233 (3%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + Y+ A E + +Q A L +G A A KA + P + Sbjct: 32 ARIQEDYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTD 91 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ L + + ++ + + + +G + ++ + Sbjct: 92 SH--LLYARCLLA--LGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREY 147 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSEN 306 +L++ A + ++ KA LE+ + +P + +HL E Sbjct: 148 ERTLRMFPEHKKILTILAFLYEYRGERDKAASYLEEALRLYPSDPEVHLLAASSHLRKEE 207 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A R +++ +VE+ +++++A G +A + P Sbjct: 208 WDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDGFLGARPDSR 260 Score = 60.7 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 103/310 (33%), Gaps = 24/310 (7%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + YK L S+ + + LA + + +LL + LA + A Sbjct: 57 QAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTD----SHLLYARCLLALGRLEEAERI 112 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 +L A + S G + SA R + L + P+ + + Y Sbjct: 113 YRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRG 172 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 E +A ++L + + + + + + + K + + +A +L L +N++ A Sbjct: 173 ERDKAASYLEEALRLYP----SDPEVHLLAASSHLRKEEWDEAEREARRALTLDENAVEA 228 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-IYTHLLSENTVGK----LKRALRL 317 S A+ + + ++A L+ P+ Y + + + + L+ + Sbjct: 229 SYLLAQVATGKGRFQEALDHLDGFLGAR--PDSREGWYLKGVVLDRLDRPEESLRAFREV 286 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 E + + + +I LE + + A + E A + Sbjct: 287 LERYPDDEVARYAMERILLE--RFPASAPERRTAADYHFTQAG-------EYAEKFYFQR 337 Query: 378 ILYWTQSALH 387 ++ + L Sbjct: 338 AYHFLRRGLR 347 >gi|148825498|ref|YP_001290251.1| heme biosynthesis protein HemY [Haemophilus influenzae PittEE] gi|148715658|gb|ABQ97868.1| HemY [Haemophilus influenzae PittEE] Length = 428 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|145637763|ref|ZP_01793414.1| HemY [Haemophilus influenzae PittHH] gi|145269061|gb|EDK09013.1| HemY [Haemophilus influenzae PittHH] Length = 428 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLALLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQTLDK 208 >gi|114332038|ref|YP_748260.1| TPR repeat-containing protein [Nitrosomonas eutropha C91] gi|114309052|gb|ABI60295.1| TPR repeat-containing protein [Nitrosomonas eutropha C91] Length = 930 Score = 67.7 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 92/294 (31%), Gaps = 42/294 (14%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + ++ L + + R + A E E ++ ++ G+ Sbjct: 367 ALKVVQQDPQLFALAGEAYMRARDFTKATEYFEKAGELSPDNVALYTAMAMSKMGQGENE 426 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 SA A + + +V ++ +E+ +A+ + + + +L Sbjct: 427 SAIADLEHATQLDDKSGRAGIMLVLTHLQQREFDKALKVVKSQLAEQPD----NPLLHNL 482 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---------------------- 269 K D+I + ++L + + A A+ Sbjct: 483 EGGVYLGKKDLIKARASFNQALSIQPDYFPAISNLARIDLQEKHPEAAQQRFEEVLKQDK 542 Query: 270 ------------LISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRA 314 +SQ K KA LEK + NP P + +L L A Sbjct: 543 KNVQAMNALAGIALSQGNKEKATEWLEKASQENPDELPPALQLGAHYLAINEPGKSLALA 602 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367 +L+ I+ +++ ++ ++++ L G D A P L LAQI Sbjct: 603 KKLQGIHPDNLSAIELLARAYLATGDKDAALENFQKLAARLPDSAPAQLQLAQI 656 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 92/288 (31%), Gaps = 34/288 (11%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L +LA + A E L+ A+ + S D+ SA ++ +A+ ++ Sbjct: 142 LRGNASLALGKIEEAKALFEQALRDKPGFAGALMGMARCSLARNDIESAMNFSEEAVKLN 201 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIA---------- 231 P+ + A+ ++ K E NRA +LI+ Sbjct: 202 PENSDTVLFRGDLLRAQNKIDEALADYDKAIKLNPESLAAYINRATILISTKKFKAAQAD 261 Query: 232 -----------------RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++L + +G + + + L + + + + A + + Sbjct: 262 LDAVRKIAPGSLPAAYTQALLDFSQGKHVVALETLQQVLSSAPDHLPSVLLAGATQFALG 321 Query: 275 KKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +AE +++ K P+ A L + + ++ ++ + + Sbjct: 322 SLPQAEQYVDQYLKKIPNNLYAIKLMASIQLKNNQAKQAVTTLTPALKVVQQDPQLFALA 381 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKI 378 + + +A A +++P ++ +A + N I Sbjct: 382 GEAYMRARDFTKATEYFEKAGELSPDNVALYTAMAMSKMGQGENESAI 429 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 90/263 (34%), Gaps = 15/263 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 A K+ + + L++ LE + L ++ A L I A+ Sbjct: 458 EFDKALKVVKSQLAEQ--PDNPLLHNLEGGVYLGKKDLIKARASFNQALSIQPDYFPAIS 515 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L + +AQ+ + L A+ + +A +L + + Sbjct: 516 NLARIDLQEKHPEAAQQRFEEVLKQDKKNVQAMNALAGIALSQGNKEKATEWLEKASQEN 575 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + + S A + + +++ A A++ ++ K Sbjct: 576 PD----ELPPALQLGAHYLAINEPGKSLALAKKLQGIHPDNLSAIELLARAYLATGDKDA 631 Query: 279 AEVILEKIWKVNP--HP---EIANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVS 332 A +K+ P P ++A IY + + T LK+A I + E+ ++ + Sbjct: 632 ALENFQKLAARLPDSAPAQLQLAQIYASMQNTRATADSLKKA---LAIKPDFWEAKLMQA 688 Query: 333 KIALEMGSIDQAHAKAMLAMKIA 355 ++A+ G +D A + A K Sbjct: 689 QLAVGDGRVDDALSIARDIQKQH 711 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 91/265 (34%), Gaps = 23/265 (8%) Query: 105 KMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYF 162 K + + H + L + L + LA + A E + + P + + Sbjct: 597 KSLALAKKLQGIHPDNLSAIELLARAYLATGDKDAALENFQKLAARLPDSAPAQLQLAQI 656 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + +A KAL I PD ++Q + + ++ A++ Sbjct: 657 YASMQNTRATADSL-KKALAIKPDFWEAK--LMQAQLAVGD-----GRVDDALSIARDIQ 708 Query: 223 RNRAILLIARSLE---NADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRK 278 + L + LE + + +A+ E+L K ++ + A L K+++ Sbjct: 709 KQHEKLPVGFELEGDLQMRQKNAVAAATAYEEALTKQKTGQLLIKLHTA--LSQSGKEKQ 766 Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A+ + + K NP + +A +Y + + + + + + +L ++ Sbjct: 767 ADQRVTQWLKENPADDGVRMYLAGVYLASKKYDPAIR--EYKTILKQHPDHAATLNNLAW 824 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358 I + A A A K AP Sbjct: 825 IYQQKKDFATALDYAEKAYKQAPDS 849 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 7/198 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L +++ + A + + +QH + + LE + + ++ A E L Sbjct: 685 LMQAQLAVGDGRVDDALSIARDIQKQH--EKLPVGFELEGDLQMRQKNAVAAATAYEEAL 742 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 T + + L+ + G A + T+ L +P V + Y+ +K++ A Sbjct: 743 TKQKTGQL-LIKLHTALSQSGKEKQADQRVTQWLKENPADDGVRMYLAGVYLASKKYDPA 801 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I K + A L + K D + A ++ K +S Sbjct: 802 IREYKTILKQHPD----HAATLNNLAWIYQQKKDFATALDYAEKAYKQAPDSPAILDTLG 857 Query: 268 KSLISQNKKRKAEVILEK 285 L+ Q ++ +L++ Sbjct: 858 WILVEQGDTKRGVSLLQQ 875 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL + A + + +++ + V + + LA ++Y+ A + + + Sbjct: 757 ALSQ------SGKEKQADQRVTQWLKENPADD--GVRMYLAGVYLASKKYDPAIREYKTI 808 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L+ + +L + + D +A YA KA +PD+P + + + V + R Sbjct: 809 LKQHPDHAATLNNLAWIYQQKKDFATALDYAEKAYKQAPDSPAILDTLGWILVEQGDTKR 868 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ L Q E A + ++ G+ + + + Sbjct: 869 GVSLLQQAVAAVPEA----AEIHYHYAVGLYKSGNTVEARQE 906 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 90/245 (36%), Gaps = 30/245 (12%) Query: 126 EVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 E + + A +L+ LQ P R L + G++ SA++ KAL Sbjct: 42 EAKQYQQQGNDKAAIIQLKNALQQNPNDPEVRYL----LGTLYNKEGNIQSAEKELNKAL 97 Query: 182 DIS-------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 D+ P + + L++ +K ++E N A LL R Sbjct: 98 DLGMDPVKVLPGLSQAWLGMGKFQ----------QVLDETEKLSEEGN--FAELLTLRGN 145 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + G + + ++L+ A + A+ +++N A E+ K+NP Sbjct: 146 ASLALGKIEEAKALFEQALRDKPGFAGALMGMARCSLARNDIESAMNFSEEAVKLNPENS 205 Query: 295 IANIYTH--LLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 ++ L ++N + L + ++N ES+ + + + I + A A Sbjct: 206 DTVLFRGDLLRAQNKIDEALADYDKAIKLNPESLAAYINRATILISTKKFKAAQADLDAV 265 Query: 352 MKIAP 356 KIAP Sbjct: 266 RKIAP 270 >gi|158521101|ref|YP_001528971.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 808 Score = 67.7 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 21/277 (7%) Query: 91 GLMSIAAHNIPLA----RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 G + A ++ A RK +Q FHN Q+ L + Q + A + Sbjct: 47 GTIMAAKKDLVAAEGTLRKAVEKAPKQAAFHNS------LGQVLLKKGQTDEAAAAFQRA 100 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + + A ++L S G + A+ + K L+++P + A + Sbjct: 101 VSLDPGLAQAHFNLGKISKAAGRADEAKTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDG 160 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ K +A + + ++ + +++ + I Sbjct: 161 ALACFEAVLKINP----RQAEAHYNIGNIHKLREEVEPAARYYEQAIACNPGFVPPYIGL 216 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEIN 321 A+ ++ + AE ++ K +++P E+AN+Y L + L ++ Sbjct: 217 ARIHLANRRNDLAESLIRKALRMDPKNGEALSELANLY--LREGRIEEAVPVFLAAIRVS 274 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E E ++ G+ QA A A+++ P Sbjct: 275 PEKAELHGALATAYSIRGATSQAMASFEKALELDPDS 311 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 76/251 (30%), Gaps = 25/251 (9%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 ++ L + A +L+ A++ L DL +A+ Sbjct: 4 DKSLTLFNKAVALHRAGSLEGAETLYRDLLRENPNHADALHLLGTIMAAKKDLVAAEGTL 63 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 KA++ +P ++ Q + + A + L + + Sbjct: 64 RKAVEKAPKQAAFHNSLGQVLLKKGQTDEAAAAFQRAVS-----------LDPGLAQAHF 112 Query: 238 DKGDMIASYHDAIES-------LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + G + + A E+ L L + + A L A E + K+N Sbjct: 113 NLGKISKAAGRADEAKTFFEKTLNLAPHHLAARNNLGNLLQQAGDNDGALACFEAVLKIN 172 Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P H I NI+ + + N V + +++I L D A Sbjct: 173 PRQAEAHYNIGNIHKLREEVEPAARY--YEQAIACNPGFVPPYIGLARIHLANRRNDLAE 230 Query: 346 AKAMLAMKIAP 356 + A+++ P Sbjct: 231 SLIRKALRMDP 241 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 6/162 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A + + + + L +I LA R+ ++A + L++ A+ Sbjct: 191 EVEPAARYYEQAIACNPGFVPPYIGL--ARIHLANRRNDLAESLIRKALRMDPKNGEALS 248 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L R G + A A+ +SP+ + A+ Y + S+A+ + + Sbjct: 249 ELANLYLREGRIEEAVPVFLAAIRVSPEKAELHGALATAYSIRGATSQAMASFEKALELD 308 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + R R + G+ + + L + Sbjct: 309 PDSARTR----FSYGNLLESSGNREGALEAYRRVMALDPDFA 346 >gi|311694260|gb|ADP97133.1| conserved hypothetical protein [marine bacterium HP15] Length = 389 Score = 67.7 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 113/308 (36%), Gaps = 31/308 (10%) Query: 134 RQYNIAHEKLEMMLQIPAT--RE---FAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A + +L P R + L + G L+ A+ + + Sbjct: 84 GETDRAILIHQNLLARPELPPRFSPQVTLE-LARDYLNAGLLDRAEALLHQLMGDKDYGR 142 Query: 189 WVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++ ++ Y KEW++A L + + + A L S E+ + D A+ Sbjct: 143 HSSQQLIDLYQQEKEWAKAAEVARTLTRGDADPAMFKVL-AYLTCELSEESLKQDDRWAA 201 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLL 303 A E+L+ + + A++ K L+ Q R+A K+++ NP PE + L Sbjct: 202 QKLAKEALEYDRSCVRANLIMMKLLVRQGSYREAGSQCLKVFEQNPEFGPEAIDRLMKLE 261 Query: 304 SE-NTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEI 360 E +G+L A +L ++ + + ++++ + A ++ P Sbjct: 262 HEHGDIGRL--AKKLRKLYENYPSTSLLLALVESVERASGRPAAIDLLRQELETRPSVRG 319 Query: 361 FLL---LAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS---VWLPLSPISKT 414 L +A E+ + + +++ + A P++ S WL P K Sbjct: 320 LLRLVEMAGYEKGMTTDEGRLVSRIGHLILANR-PVYRCVSCGFSGRQLHWL--CPSCK- 375 Query: 415 LCYFEWKI 422 +W+ Sbjct: 376 ----QWET 379 >gi|187466319|emb|CAQ51811.1| transmembrane and tetratricopeptide repeat containing 1 [Mus musculus] Length = 593 Score = 67.3 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 90/295 (30%), Gaps = 25/295 (8%) Query: 113 QHTFHNEYLVYLLEVQIALAER------QYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + E L L + A + LQ+ A+++L Sbjct: 212 EIWLSRESLFRLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKS 271 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A +++ PD ++ + + A KN + + Sbjct: 272 QEKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSD--- 328 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK-------RKA 279 L ++ D G + ++++L + +A + + S + R+A Sbjct: 329 -LHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRA 387 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + ++P + +Y + + L+ + E + ++++ MG Sbjct: 388 LKVARTAEVLSP---LGALYYN--TGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMG 442 Query: 340 SIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392 +A + PR E + LL+ I H K L + AL DP Sbjct: 443 QTKEAEKITSHIVSEEPRCLECYRLLSAIHSKQEH-HGKALEAIEKALQLKPKDP 496 >gi|160877201|ref|YP_001556517.1| HemY domain-containing protein [Shewanella baltica OS195] gi|160862723|gb|ABX51257.1| HemY domain protein [Shewanella baltica OS195] gi|315269405|gb|ADT96258.1| HemY domain protein [Shewanella baltica OS678] Length = 388 Score = 67.3 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 53/384 (13%), Positives = 119/384 (30%), Gaps = 32/384 (8%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLFAVSRFFLS-CPAMLFHMLH 77 + V I G+ TS + L F + +L + V + Sbjct: 20 WLVGNTGYVYIAAGDYQIETSLVFGIIALIVFYAVFQVLEWLVISAINLMLRSRFIPHHW 79 Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAER-- 134 +R K + + G +++A + P A R M L Q Sbjct: 80 RRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPALNLLAAARAAQYQQKIGER 137 Query: 135 ----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A + TR + D + A + +P Sbjct: 138 DQYLDRAAAQPLAANAVATTRTRYLLKQGELALARTELD-----KLAPTSKSKAPVLKLA 192 Query: 191 TEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 ++ Y ++W A+ L +K++ + N + +L A + Sbjct: 193 ----LELYRTQEDWD-ALKLLIPILKKRQILDDAQLNELNIATNCALLKAAAIKGEEALE 247 Query: 248 DAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + S + + A L N+K +A ++ K + +P + + Sbjct: 248 QCWQWLSRSERNQSEFL---AIYAMGLCRFNRKEQALKLIAKKLRTSPESAVLTAIPEIA 304 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + K+ L+ E ++ + + + ++K+ + + +A + ++ P K +L Sbjct: 305 TAQDTEIRKQLLKHEVTHENNADYQMCLAKLYQQTRDMKEAKSCWQNVCRLEPTKASWLA 364 Query: 364 LAQIEQANSHNTDKILYWTQSALH 387 LA+I++ + A++ Sbjct: 365 LARIQE-QLGEQGNANQSYRQAVN 387 >gi|56415790|ref|YP_152865.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|56130047|gb|AAV79553.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 398 Score = 67.3 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R A R Sbjct: 21 IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 81 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 139 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 192 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 252 WKNQSRKTRYQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 312 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRLHQPEEAA 381 >gi|261380376|ref|ZP_05984949.1| HemY family protein [Neisseria subflava NJ9703] gi|284796901|gb|EFC52248.1| HemY family protein [Neisseria subflava NJ9703] Length = 407 Score = 67.3 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 53/383 (13%), Positives = 126/383 (32%), Gaps = 26/383 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M ++ + + + + Y +V + + R + + L +F L Sbjct: 1 MKTVVWIVILFAAAVGLALASGIYTGNVYVVVEQTMLRINLHAFVLGLLLSVFVLYFL-- 58 Query: 61 VSRFFLS---CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TF 116 +F PA + R + +L + ++ A + + V Q Sbjct: 59 -IKFVFGLLNIPARMQRFGIARKGRQASASLNSAGLAYFEGRFEKAEQEAAKVLQNKEAG 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175 N L +L A + + L + +P ++ + + L E + D + + Sbjct: 118 DNRTLALMLGAHAADQMENFELRDRYLHEIEHLPQKQQLSRHLLLAESALGCRDYPTVAQ 177 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARS 233 A I+ + + ++ + S + + K ++ + R Sbjct: 178 NLEAAAKINGNLSRLVRLQLRYAFDHGDASDVLAKAEKLVKAGAINDYEAEQYQNWAYRR 237 Query: 234 L--ENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L E D G + A ES+K LC + A+ +A ++ + Sbjct: 238 LLSEVTDAGRLKACLKQIPESVKSGELC-------VAIAEKYERLGLYAEAVKWVKNHYP 290 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQA 344 N PE+ + + + ++A+ L + ++ L+ + ++A +A Sbjct: 291 QNRQPELLEAFVESVRFLSERDQQKAIDLADSWLQEQPDNAPLLMYLGQLAYGRKLWGKA 350 Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367 ++ + P L+LA++ Sbjct: 351 QGYLEASIALQPSVSAHLVLARV 373 >gi|156740237|ref|YP_001430366.1| hypothetical protein Rcas_0215 [Roseiflexus castenholzii DSM 13941] gi|156231565|gb|ABU56348.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM 13941] Length = 2262 Score = 67.3 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 90/259 (34%), Gaps = 12/259 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 +Y + + ++ + + + A + E L+ + Y L Sbjct: 1915 AARSAYARAVQLAPDHADYRYAQARLLRQQGRIDEARQVFEKALEHEPQQGAWHYELAEL 1974 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D + + YA A+ ++PD P +V+ + +E A + + + Sbjct: 1975 LRQQRDPAAIEHYAA-AVQLAPDEPRHWLGLVEGLLERQERDAAQETVERALLRFGD--- 2030 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L ++G++ + ++L + ++ A +L Sbjct: 2031 -HAALHAVAGALQEEQGEIERAAWHYEQALTRDPQNATYCWRLGRAQFELGNPDAARELL 2089 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E+ ++P H IA ++ ++ L + R E+ + + ++++ +M Sbjct: 2090 ERALALDPGSADAHATIARLFAS--ENDSRAALVHSQRAVELRPDDPALQIQLAEVLAQM 2147 Query: 339 GSIDQAHAKAMLAMKIAPR 357 D+A A++ AP Sbjct: 2148 RRFDEARQALERAVQRAPS 2166 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 82/263 (31%), Gaps = 11/263 (4%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A+ + SY ++ ++Y Q+ + ++ A L+ +++ ++ Sbjct: 641 GHNAKAVESYARAVALRPDDPMLYARLGQVRRSIGDWSGARAALQRAVELDSSNAALQDE 700 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G++ SA A+ + P + + A L + Sbjct: 701 LGQALEACGEMESALAAYRAAVSLDPQCATYHRRLGALLRNCGDNDGAAAALRTALELRP 760 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + GD + + L S + + + R A Sbjct: 761 DS----AATYGELAELLWRTGDTDQALDAYRRAHALAPESPDHTRALGLAYRRLGRSRDA 816 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 E +L + + P H + L +T L + ++ + + + Sbjct: 817 ERLLRQALTLAPERADLHYDYGIAAEALEQWDTA--LAAYEQAAMLDPQCADYARAAGAL 874 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 L G + +A + +A++ A R Sbjct: 875 LLRRGDLARARSLLAVALRRARR 897 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 78/281 (27%), Gaps = 11/281 (3%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 K A L + AR + +Y E + A Sbjct: 554 QQKRSAAAAHELGHVYLQQGRFARALEAYRHAAQQQPGEPAYRRSVAVALRRLGRLEEAE 613 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 +L ++ + L G A +A+ + PD P + + Q Sbjct: 614 AELRDLIAASGSDAATYAELGEVYADAGHNAKAVESYARAVALRPDDPMLYARLGQVRRS 673 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +WS A L + E + + A L G+M ++ ++ L Sbjct: 674 IGDWSGARAALQRAV----ELDSSNAALQDELGQALEACGEMESALAAYRAAVSLDPQCA 729 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRAL 315 L + A L ++ P+ A Y L + +T L Sbjct: 730 TYHRRLGALLRNCGDNDGAAAALRTALELR--PDSAATYGELAELLWRTGDTDQALDAYR 787 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 R + ES + + +G A A+ +AP Sbjct: 788 RAHALAPESPDHTRALGLAYRRLGRSRDAERLLRQALTLAP 828 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 92/342 (26%), Gaps = 48/342 (14%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + + + AR + + +L + LA + A + +E ++ Sbjct: 1768 GRVLLDCGHATAARTELTSATASD--PRHAQAHLFLGRACLALNEPQTAIDAIEQAAELR 1825 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 +L G A A +A+ + A + Y + A Sbjct: 1826 PDHAPTAAALSQAYAAAGRRERAIAAAQRAVRLDSSAGEHHHLLATLYAASGRLQEARAA 1885 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + A G + A+ +++L + A+ L Sbjct: 1886 LINALTLQPDV----AAWHAQMGDICQRMGMIDAARSAYARAVQLAPDHADYRYAQARLL 1941 Query: 271 ISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 Q + +A + EK + P H E+A + L + ++ ++ + Sbjct: 1942 RQQGRIDEARQVFEKALEHEPQQGAWHYELAEL---LRQQRDPAAIEHYAAAVQLAPDEP 1998 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA--------QIEQA------- 370 + + + LE D A A+ +A +IE+A Sbjct: 1999 RHWLGLVEGLLERQERDAAQETVERALLRFGDHAALHAVAGALQEEQGEIERAAWHYEQA 2058 Query: 371 -------------------NSHNTDKILYWTQSALHAMPDPL 393 N D + AL P Sbjct: 2059 LTRDPQNATYCWRLGRAQFELGNPDAARELLERALALDPGSA 2100 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 8/201 (3%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G A +A+ +PD V A + + + A L + + Sbjct: 1320 LALVHLERGWHGEALAELNQAVATAPDRTEVRRARARALMAIGQLDHARADLVEALRREP 1379 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 A + D G + + A + L ++ A++L + ++ +A Sbjct: 1380 ----RDAESYALLAEILLDLGHTLQALDSARRAATLQPDNPQYRRMLARALRASGRRAEA 1435 Query: 280 EVILEKIWKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L + P+ L ++ + + + + L Sbjct: 1436 IEHLSGVVNDTSPPQWWEELADDHLALGHLPAARIA-LEHAVAAAPDQATTRFRLGDVLL 1494 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 +G A + +A+ P Sbjct: 1495 RLGEPAAATEQLRIAITRRPD 1515 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 6/194 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 I A + + + Y L Q L + A E LE L + A Sbjct: 2046 GEIERAAWHYEQALTRDPQNATYCWRLGRAQFEL--GNPDAARELLERALALDPGSADAH 2103 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++ D +A ++ +A+++ PD P + + + + + A L + + Sbjct: 2104 ATIARLFASENDSRAALVHSQRAVELRPDDPALQIQLAEVLAQMRRFDEARQALERAVQR 2163 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A + LL G + ++ + A ++ + Sbjct: 2164 AP----SDPELLARYGEMALTVGLYHEALGAFERAIAQRPDEPRYHFFAGRAHRRLKQYS 2219 Query: 278 KAEVILEKIWKVNP 291 +A + K+ P Sbjct: 2220 RAIERFRRAVKLRP 2233 >gi|77165454|ref|YP_343979.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707] gi|76883768|gb|ABA58449.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707] Length = 934 Score = 67.3 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 89/267 (33%), Gaps = 14/267 (5%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + A A + + + + L+ L + + + A E L+I Sbjct: 452 HLRAQEFDKALAAAKRLR-EKQPDSPLPINLIGA-AYLGKGEESKAQEAFRQALEIAPGD 509 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A ++L + + G++ A +AL P + +A ++ Q Sbjct: 510 PSATHNLAMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQ 569 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + R +L + ++G S E L + + + Sbjct: 570 AMEKNSKALEPRVLL----ARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLEN 625 Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 ++ R +K+ +V P H +A Y + + + + K + ++N S Sbjct: 626 SQLRDGVKTFQKLVEVQPQSAQAHYLLAKAYATVNNTDKLR--KELEQALKLNPNHTLSK 683 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++++ L + +A K +K A Sbjct: 684 IAMTRL-LMQENQPEAANKLFQELKQA 709 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 116/393 (29%), Gaps = 37/393 (9%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQ 148 +++I NI A ++ + H H L+ L LE Q E+ N + +E + Sbjct: 517 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 576 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 R L G + + D+ P P + V + + + Sbjct: 577 ALEPRVL----LARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRDGV 632 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + E A + A + + ++LKL N ++ I + Sbjct: 633 KTFQK----LVEVQPQSAQAHYLLAKAYATVNNTDKLRKELEQALKLNPNHTLSKIAMTR 688 Query: 269 SLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ +N+ A + L++ + +P + + + + Sbjct: 689 LLMQENQPEAANKLFQELKQAYPEHPEVLAQEGWLAMRQNRPQDAIIAFRE-ALKRSPTS 747 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384 + +V ++ L+ G+ +++ A +K P + LA + A +T Sbjct: 748 QIIVNLAHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTV 807 Query: 385 ALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS--SENINFSLEMA 442 A D + L W + P +E A Sbjct: 808 VKRAP--------DNVV------------ALNNLAWLLRKNDPAKALEYAERALELAPNA 847 Query: 443 YPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475 P D ML K S++ + D Sbjct: 848 PPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPE 880 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 87/338 (25%), Gaps = 76/338 (22%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK---LEMMLQIPA 151 + A + P A K +YL + AL +R++ A E + + Sbjct: 78 VKAGDGPSAEKELKRALSLGLASEAAAIYL--TRAALLQREFQTAIETSTDYPALPEDEQ 135 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKEW- 204 A+ + R L A++ AL I+P AP AV + ++W Sbjct: 136 AELLALRGHAYLGLRE--LEKAEKSYESALSINPAAPEAGFGKARIAAVQNRLEETRQWL 193 Query: 205 ------------------------------------------SRAITFLNQKKKN----- 217 + A LN+ Sbjct: 194 EKVLQTTPSFAPAWSLLGDLERYQGNGEAAEQAYGKAIAHRFNNASDLLNRALVRIYLKD 253 Query: 218 -----------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 +K + + L + + ++L + A A Sbjct: 254 YEGAASDLETLSKRARNHPGVTYAQGLLH-FQQQQYADALTSFQKTLSKNPEYMPAVFYA 312 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKE 323 + Q + +A +L + K PH + A L N + N Sbjct: 313 GIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMIRLREGNYTSAQAILEPIIAQNPN 372 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +L ++ L G +++ A P Sbjct: 373 DTAALDLLGSAILGQGKPEKSAAYFQKVTAQTPESAAA 410 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 106/294 (36%), Gaps = 12/294 (4%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A ++ + N A+ + + Q+ L L L + + + + + Sbjct: 343 AKTLAMIRLREGNYTSAQAILEPIIAQNPNDTAALDLL--GSAILGQGKPEKSAAYFQKV 400 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 A L G+ KA+++ P ++ ++ A+E+ + Sbjct: 401 TAQTPESAAAYMKLGLGFMMSGEHEQGIGALEKAIELDSQLPQADRLIILGHLRAQEFDK 460 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ K+ K+ + I LI + KG+ + ++L++ A+ Sbjct: 461 ALAA--AKRLREKQPDSPLPINLIGAA--YLGKGEESKAQEAFRQALEIAPGDPSATHNL 516 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-H-PEIANIYTHLLSENTVGKLKR-ALRLEEINKE 323 A I + KA + ++ + +P H + + + K K + E N + Sbjct: 517 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 576 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHN 374 ++E V++++ LE G ++ A + P LL+ AQ+E + + Sbjct: 577 ALEPRVLLARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRD 630 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 18/217 (8%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A K+ + Q + H E L E +A+ + + A L+ T + + +L Sbjct: 697 EAANKLFQELKQAYPEHPEVLAQ--EGWLAMRQNRPQDAIIAFREALKRSPTSQI-IVNL 753 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + G+ N + L P+ V + Y+ K+ +A + K A + Sbjct: 754 AHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTVVKRAPD 813 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 ++ + K D + A +L+L N+ L+ + + +++ Sbjct: 814 -----NVVALNNLAWLLRKNDPAKALEYAERALELAPNAPPVMDTLGMLLLEKGEAKRSL 868 Query: 281 VILEKIWKVNP-------HPEIANIYTHLLSENTVGK 310 +L K P H +A E+ + Sbjct: 869 RLLRKASDRAPENLTIRYHFALALA---QNGESAQAR 902 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 2/126 (1%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + LA +Q A +++ A+ +L + R D A YA +AL+++P+ Sbjct: 788 ANLYLALKQEQKAASAFTTVVKRAPDNVVALNNLAWL-LRKNDPAKALEYAERALELAPN 846 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 AP V + + + E R++ L + A E R +A + +N + Sbjct: 847 APPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPENLTIRYHFALALA-QNGESAQARQVL 905 Query: 247 HDAIES 252 +++ Sbjct: 906 DGILDA 911 >gi|229845557|ref|ZP_04465684.1| HemY [Haemophilus influenzae 6P18H1] gi|229811492|gb|EEP47194.1| HemY [Haemophilus influenzae 6P18H1] Length = 428 Score = 67.3 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208 >gi|197364720|ref|YP_002144357.1| protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197096197|emb|CAR61793.1| Porphyrin biosynthetic protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 379 Score = 67.3 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 107/370 (28%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I TS + IL + + + R A R Sbjct: 2 IAGHQGYVLIQTDTYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFAGRK 61 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 62 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 119 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 120 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 172 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 Q Y+ WS + + K +RA+L + D+ Sbjct: 173 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSEGLRTW 232 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + + A+ LI + A+ I+ K + L + N Sbjct: 233 WKNQSRKTRYQVALQVAMAEHLIECDDHDMAQQIIIDGLKRQYDDRLVLPIPRLRTNNPE 292 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ G +A A+K P + LA Sbjct: 293 QLEKVLRQQIKTVGDRPLLWSTLGQSLMKHGEWQEATLAFRAALKQRPDAYDYAWLADAL 352 Query: 369 QANSHNTDKI 378 + Sbjct: 353 DRLHQPEEAA 362 >gi|167561973|ref|ZP_02354889.1| putative hemY protein [Burkholderia oklahomensis EO147] Length = 396 Score = 67.3 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 122/398 (30%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + V V I + S + + L Sbjct: 3 LRGIIWLAVLFAIAAGLATVGRFDTGQVLIVYPPYRVDVSLNFFVLAIIVVFIVLYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++ +L L ++ A A K Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAQASLRDALANLYAGRFSRAEKAARDALSVDANQGAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + E + ++ L R D A Sbjct: 123 SLI-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K W+ + + + + + A+ L ++ E+ Sbjct: 178 EMQASGGKRIHAQQIALRAQQQLKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236 Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++ + + + + AA+ LI+ ++++A I+E N + Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEGALAHNWN 293 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A E + L + ++ + +A + A+ Sbjct: 294 ARLLRRYPDTAGSDALPLIQKAEGWRRDRPEDADLLFALGRLCQQQQLWGKAQSFLESAL 353 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + + ++ +SAL Sbjct: 354 KLADDEPLKIRTHRALARLFERLGESDKAAQHYRESAL 391 >gi|145631662|ref|ZP_01787426.1| adenylate cyclase [Haemophilus influenzae R3021] gi|144982741|gb|EDJ90273.1| adenylate cyclase [Haemophilus influenzae R3021] Length = 428 Score = 67.3 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208 >gi|187929642|ref|YP_001900129.1| HemY domain-containing protein [Ralstonia pickettii 12J] gi|309781592|ref|ZP_07676326.1| porphyrin biosynthesis protein [Ralstonia sp. 5_7_47FAA] gi|187726532|gb|ACD27697.1| HemY domain protein [Ralstonia pickettii 12J] gi|308919567|gb|EFP65230.1| porphyrin biosynthesis protein [Ralstonia sp. 5_7_47FAA] Length = 397 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 47/375 (12%), Positives = 105/375 (28%), Gaps = 21/375 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S +L+ L L+ Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLFYPPYRVEMSLNFVLAALLATFVVLHLVMR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + K AL + S+ A A + Sbjct: 61 LFHHVAGMPARAAAYRERNRILKASAALREAMESLFAGRFGHAERQAREAQA--WEPQRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E + A + ++ L ++ D A Sbjct: 119 TAALIGARAAHRMQETERRDAWMAEVSSPDREQAKLVSMAELLVDAR---DAEGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + ++ + K WS + +K + +L AR + A Sbjct: 176 QLQSQGARQIQAQRIALRAHQHLKNWSEVLRLTRALEKRNAIHS-----VLAARLKQMAC 230 Query: 239 KGDMIASYHDAIESLKLCDNSIM-------ASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + HDA + AA + A+ I+E+ K + Sbjct: 231 ETLLAERRHDADALNGFWRELTTEERRSPRIASQAALYFAQLGRTDDAKRIVEEGLKTHW 290 Query: 292 HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + Y + + +++A + + E + + + +A + Sbjct: 291 DGRLIRRYADCAVPGKALPLIQQAEKWLAQHPVDAELFYTLGMLCFKEQLWGKAQSNLES 350 Query: 351 AMKIAPRKEIFLLLA 365 A+K A L A Sbjct: 351 ALKYADADHSGSLRA 365 >gi|26338035|dbj|BAC32703.1| unnamed protein product [Mus musculus] Length = 604 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 90/295 (30%), Gaps = 25/295 (8%) Query: 113 QHTFHNEYLVYLLEVQIALAER------QYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + E L L + A + LQ+ A+++L Sbjct: 223 EIWLSRESLFRLYPRHASALNNLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKS 282 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A +++ PD ++ + + A KN + + Sbjct: 283 QEKTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSD--- 339 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK-------RKA 279 L ++ D G + ++++L + +A + + S + R+A Sbjct: 340 -LHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRA 398 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + ++P + +Y + + L+ + E + ++++ MG Sbjct: 399 LKVARTAEVLSP---LGALYYN--TGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMG 453 Query: 340 SIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392 +A + PR E + LL+ I H K L + AL DP Sbjct: 454 QTKEAEKITSHIVSEEPRCLECYRLLSAIHSKQEH-HGKALEAIEKALQLKPKDP 507 >gi|254434614|ref|ZP_05048122.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus oceani AFC27] gi|207090947|gb|EDZ68218.1| putative PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus oceani AFC27] Length = 926 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 89/267 (33%), Gaps = 14/267 (5%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + A A + + + + L+ L + + + A E L+I Sbjct: 444 HLRAQEFDKALAAAKRLR-EKQPDSPLPINLIGA-AYLGKGEESKAQEAFRQALEIAPGD 501 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A ++L + + G++ A +AL P + +A ++ Q Sbjct: 502 PSATHNLAMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQ 561 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + R +L + ++G S E L + + + Sbjct: 562 AMEKNSKALEPRVLL----ARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLEN 617 Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 ++ R +K+ +V P H +A Y + + + + K + ++N S Sbjct: 618 SQLRDGVKTFQKLVEVQPQSAQAHYLLAKAYATVNNTDKLR--KELEQALKLNPNHTLSK 675 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++++ L + +A K +K A Sbjct: 676 IAMTRL-LMQENQPEAANKLFQELKQA 701 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 116/393 (29%), Gaps = 37/393 (9%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQ 148 +++I NI A ++ + H H L+ L LE Q E+ N + +E + Sbjct: 509 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 568 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 R L G + + D+ P P + V + + + Sbjct: 569 ALEPRVL----LARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRDGV 624 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + E A + A + + ++LKL N ++ I + Sbjct: 625 KTFQK----LVEVQPQSAQAHYLLAKAYATVNNTDKLRKELEQALKLNPNHTLSKIAMTR 680 Query: 269 SLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ +N+ A + L++ + +P + + + + Sbjct: 681 LLMQENQPEAANKLFQELKQAYPEHPEVLAQEGWLAMRQNRPQDAIIAFRE-ALKRSPTS 739 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384 + +V ++ L+ G+ +++ A +K P + LA + A +T Sbjct: 740 QIIVNLAHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTV 799 Query: 385 ALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYIS--SENINFSLEMA 442 A D + L W + P +E A Sbjct: 800 VKRAP--------DNVV------------ALNNLAWLLRKNDPAKALEYAERALELAPNA 839 Query: 443 YPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIH 475 P D ML K S++ + D Sbjct: 840 PPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPE 872 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 47/338 (13%), Positives = 87/338 (25%), Gaps = 76/338 (22%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK---LEMMLQIPA 151 + A + P A K +YL + AL +R++ A E + + Sbjct: 70 VKAGDGPSAEKELKRALSLGLASEAAAIYL--TRAALLQREFQTAIETSTDYPALPEDEQ 127 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVLAKEW- 204 A+ + R L A++ AL I+P AP AV + ++W Sbjct: 128 AELLALRGHAYLGLRE--LEKAEKSYESALSINPAAPEAGFGKARIAAVQNRLEETRQWL 185 Query: 205 ------------------------------------------SRAITFLNQKKKN----- 217 + A LN+ Sbjct: 186 EKVLQTTPSFAPAWSLLGDLERYQGNGEAAEQAYGKAIAHRFNNASDLLNRALVRIYLKD 245 Query: 218 -----------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 +K + + L + + ++L + A A Sbjct: 246 YEGAASDLETLSKRARNHPGVTYAQGLLH-FQQQQYADALTSFQKTLSKNPEYMPAVFYA 304 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKE 323 + Q + +A +L + K PH + A L N + N Sbjct: 305 GIAYYQQGQLTQAGQLLNQFLKRFPHSDTAAKTLAMIRLREGNYTSAQAILEPIIAQNPN 364 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +L ++ L G +++ A P Sbjct: 365 DTAALDLLGSAILGQGKPEKSAAYFQKVTAQTPESAAA 402 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 106/294 (36%), Gaps = 12/294 (4%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A ++ + N A+ + + Q+ L L L + + + + + Sbjct: 335 AKTLAMIRLREGNYTSAQAILEPIIAQNPNDTAALDLL--GSAILGQGKPEKSAAYFQKV 392 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 A L G+ KA+++ P ++ ++ A+E+ + Sbjct: 393 TAQTPESAAAYMKLGLGFMMSGEHEQGIGALEKAIELDSQLPQADRLIILGHLRAQEFDK 452 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ K+ K+ + I LI + KG+ + ++L++ A+ Sbjct: 453 ALAA--AKRLREKQPDSPLPINLIGAA--YLGKGEESKAQEAFRQALEIAPGDPSATHNL 508 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-H-PEIANIYTHLLSENTVGKLKR-ALRLEEINKE 323 A I + KA + ++ + +P H + + + K K + E N + Sbjct: 509 AMLAIKKGNIEKAHALYQEALRYHPGHLRTLLKLSALEAQQGHPEKAKNWVEQAMEKNSK 568 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHN 374 ++E V++++ LE G ++ A + P LL+ AQ+E + + Sbjct: 569 ALEPRVLLARYYLEQGRPARSLAITREIQDLYPAHPALLLVVGTAQLENSQLRD 622 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 18/217 (8%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A K+ + Q + H E L E +A+ + + A L+ T + + +L Sbjct: 689 EAANKLFQELKQAYPEHPEVLAQ--EGWLAMRQNRPQDAIIAFREALKRSPTSQI-IVNL 745 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + G+ N + L P+ V + Y+ K+ +A + K A + Sbjct: 746 AHAQLQAGNQNESLATLEDWLKKHPEDMVVQYNLANLYLALKQEQKAASAFTTVVKRAPD 805 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 ++ + K D + A +L+L N+ L+ + + +++ Sbjct: 806 -----NVVALNNLAWLLRKNDPAKALEYAERALELAPNAPPVMDTLGMLLLEKGEAKRSL 860 Query: 281 VILEKIWKVNP-------HPEIANIYTHLLSENTVGK 310 +L K P H +A E+ + Sbjct: 861 RLLRKASDRAPENLTIRYHFALALA---QNGESAQAR 894 Score = 44.2 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 2/126 (1%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + LA +Q A +++ A+ +L + R D A YA +AL+++P+ Sbjct: 780 ANLYLALKQEQKAASAFTTVVKRAPDNVVALNNLAWL-LRKNDPAKALEYAERALELAPN 838 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 AP V + + + E R++ L + A E R +A + +N + Sbjct: 839 APPVMDTLGMLLLEKGEAKRSLRLLRKASDRAPENLTIRYHFALALA-QNGESAQARQVL 897 Query: 247 HDAIES 252 +++ Sbjct: 898 DGILDA 903 >gi|145642201|ref|ZP_01797769.1| HemY [Haemophilus influenzae R3021] gi|145273125|gb|EDK13003.1| HemY [Haemophilus influenzae 22.4-21] Length = 428 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208 >gi|298712522|emb|CBJ26790.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Ectocarpus siliculosus] Length = 977 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 93/290 (32%), Gaps = 15/290 (5%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQI 149 G + + N ARK+ + ++ + +L + L A ++ Sbjct: 630 GKLEASEGNRDAARKIFARGIRESSEDVSFLCHSLG--SLELAADRLGEARAVFLAGIER 687 Query: 150 --PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 ++ L G+ ++A+ Y ++++ P +A A + A Sbjct: 688 YPSGSQLLLGAGLAIAKM--GEPDNAREYFRRSVEADPSHAHAWQAWGLMETRAGNFKAA 745 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + K L A ++ G+ + L+ C + + A Sbjct: 746 RSLWERGLKANPT----HGPLWQAYAVMEEKVGEPERARKLFEAGLERCPDHVQLHQAWA 801 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHP-EIANIY--THLLSENTVGKLKRALRLEEINKES 324 ++A ++ + +++PH + +Y + V K + Sbjct: 802 VMEGMLGDLKRARELVVEGLRLDPHHGALWTVYSIVERQGGSDVKARKVLELGVRACPDH 861 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSH 373 +++ ++G+ +A + ++ P ++ A +E A + Sbjct: 862 GPLHRCWAQMEHQLGNTAEARRRFERGLEACPTYARLYYAYADMEAAMGN 911 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 82/232 (35%), Gaps = 12/232 (5%) Query: 166 RIGDLNSAQR-YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ ++A++ +A + S D ++ ++ + A A + ++ Sbjct: 635 SEGNRDAARKIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPSGSQ- 693 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LL+ L A G+ + S++ + A + A + E Sbjct: 694 ---LLLGAGLAIAKMGEPDNAREYFRRSVEADPSHAHAWQAWGLMETRAGNFKAARSLWE 750 Query: 285 KIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMG 339 + K NP H + Y + E VG+ +RA +L E + V+ + + +G Sbjct: 751 RGLKANPTHGPLWQAYAVM--EEKVGEPERARKLFEAGLERCPDHVQLHQAWAVMEGMLG 808 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + +A + +++ P + I + + K + + A PD Sbjct: 809 DLKRARELVVEGLRLDPHHGALWTVYSIVERQGGSDVKARKVLELGVRACPD 860 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 106/324 (32%), Gaps = 35/324 (10%) Query: 69 PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY--LLE 126 PA + +R KG A ++ ++ P A + + + ++ + + LL Sbjct: 117 PAEMGGSRARRIKVKGLYARARKILRSSS---PSASETAAAILEEALTVDPQDGHSWLLL 173 Query: 127 VQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A N A + +++ P ++ + GD A+ + L+ P Sbjct: 174 ARTREAMGDVNAASDVFKRAVVECPGNAHLWQSWGMLQA-KFGDCAKARISFSNGLEADP 232 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-----------LIARSL 234 P+V A + RA L +++ +L L+ +++ Sbjct: 233 GNPFVCHAWALMEQRDGDNDRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAM 292 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + +K S + ++ AA + KKR AE E Sbjct: 293 DRLEKAASARSKRSGGGG---SPD--PSAAWAAA--GDRPKKRSAE---EAEDADQGVTA 342 Query: 295 IANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAML 350 + + + E + G KR+L L ++ + V ++ + G++ A Sbjct: 343 LLMAWANF--EESRGNEKRSLELMAKAMENEPDNARARVGRARFEMRRGNMRDARIFLSE 400 Query: 351 AMKIAPRKEIFLLL-AQIEQANSH 373 A + + A +E + Sbjct: 401 AANLPQEDGTLFSMWATLEIKEGN 424 >gi|148978780|ref|ZP_01815160.1| HemY protein [Vibrionales bacterium SWAT-3] gi|145962201|gb|EDK27485.1| HemY protein [Vibrionales bacterium SWAT-3] Length = 393 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 110/362 (30%), Gaps = 18/362 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI F V+ + S V I+ N+ S + + L A L Sbjct: 1 MIRLIFLFLVLGAGLFVGTQFSGQQGYVLISIANKTIEMSVTTMAIFVIVLLAALFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + G++ + + A K + + H Sbjct: 61 LFKKLIYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178 L YL+ Q A + +K + AV L +I + +A Sbjct: 119 LCYLVASQAAHEQGNTAE-RDKYIELASKQDDSLLAVE-LTKAKQQISESNYEAA---FD 173 Query: 179 KALDISPDAPWVTEAVVQQ----YVLAKEWSRAIT----FLNQKKKNAKEWNRNRAILLI 230 ++ P AV+ Y+ K W + K A E Sbjct: 174 TLSNLKGSHP-NNTAVLGLLKATYMQLKLWQPLLELTPKLAKNKLLTADEQRELEQKAQC 232 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + A + + + S C K LI++ +A ++++ Sbjct: 233 GLLHDVAQQQGSEGLISHWNKLSRKQKQSSHLVSCFVKQLIARKADAEAFTVIKENIAKT 292 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 E+ + L + + R + + E+ +++ L +A + Sbjct: 293 GSNELYMLLPELNLADHHPVVVMLERAISKDNNNAEAHSALAQFYLREQKWAEAQSHFEK 352 Query: 351 AM 352 A+ Sbjct: 353 AL 354 >gi|307728971|ref|YP_003906195.1| HemY domain-containing protein [Burkholderia sp. CCGE1003] gi|307583506|gb|ADN56904.1| HemY domain protein [Burkholderia sp. CCGE1003] Length = 396 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 48/402 (11%), Positives = 118/402 (29%), Gaps = 47/402 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + +V V + + S + + L L Sbjct: 3 IRGLLWLALLFAIAVVLAVVGRFDMGQVLLVYPPYRVDMSLNLFVVGLVVLFILVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + R P + + K + AL + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARARVAKAHAALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAA 122 Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 H H QI A + A ++ R Sbjct: 123 GLIAATAAHRMHEYGRRDEWLAQIDQA--DWQDAR-----LMATADMRADGR-------- 167 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEW 221 D + A + + +++ K W + + ++ + Sbjct: 168 ---DADGALAALKEMQSQGGRRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVA 224 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAE 280 R R + + D + +++ + + AA+ L++ N+ ++A Sbjct: 225 VRLRQLAAENLLRDRRHNADALLELWNSLTPTERHSPRL---ADLAAELLVALNRPQEAR 281 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 I+E N + Y + + +++A ++ + + L + ++ L Sbjct: 282 KIVEDALAQNWDARLLRRYPDTAGGDALPLIQKAEAWQKDRPDDADLLFALGRLCLHQQL 341 Query: 341 IDQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKI 378 +A + A+K+A + LA++ + +T+K Sbjct: 342 WGKAQSFLERALKLADNETLKIRSHRALARLHE-QLGDTEKA 382 >gi|53725178|ref|YP_102501.1| hypothetical protein BMA0732 [Burkholderia mallei ATCC 23344] gi|67640112|ref|ZP_00438931.1| putative hemY protein [Burkholderia mallei GB8 horse 4] gi|121600286|ref|YP_993591.1| hypothetical protein BMASAVP1_A2281 [Burkholderia mallei SAVP1] gi|124386090|ref|YP_001028946.1| hypothetical protein BMA10229_A3003 [Burkholderia mallei NCTC 10229] gi|126441846|ref|YP_001058123.1| HemY protein N-terminus family protein [Burkholderia pseudomallei 668] gi|126449239|ref|YP_001081139.1| hypothetical protein BMA10247_1594 [Burkholderia mallei NCTC 10247] gi|167003505|ref|ZP_02269291.1| putative hemY protein [Burkholderia mallei PRL-20] gi|167718600|ref|ZP_02401836.1| hypothetical protein BpseD_06227 [Burkholderia pseudomallei DM98] gi|217419852|ref|ZP_03451358.1| HemY-like protein [Burkholderia pseudomallei 576] gi|237811342|ref|YP_002895793.1| HemY protein, N-terminus family [Burkholderia pseudomallei MSHR346] gi|254178554|ref|ZP_04885209.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|254199406|ref|ZP_04905772.1| putative hemY protein [Burkholderia mallei FMH] gi|254205721|ref|ZP_04912073.1| putative hemY protein [Burkholderia mallei JHU] gi|254357879|ref|ZP_04974152.1| putative hemY protein [Burkholderia mallei 2002721280] gi|52428601|gb|AAU49194.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] gi|121229096|gb|ABM51614.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gi|124294110|gb|ABN03379.1| putative hemY protein [Burkholderia mallei NCTC 10229] gi|126221339|gb|ABN84845.1| HemY-like protein [Burkholderia pseudomallei 668] gi|126242109|gb|ABO05202.1| putative hemY protein [Burkholderia mallei NCTC 10247] gi|147749002|gb|EDK56076.1| putative hemY protein [Burkholderia mallei FMH] gi|147753164|gb|EDK60229.1| putative hemY protein [Burkholderia mallei JHU] gi|148027006|gb|EDK85027.1| putative hemY protein [Burkholderia mallei 2002721280] gi|160699593|gb|EDP89563.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gi|217397156|gb|EEC37172.1| HemY-like protein [Burkholderia pseudomallei 576] gi|237502864|gb|ACQ95182.1| HemY protein, N-terminus family [Burkholderia pseudomallei MSHR346] gi|238520767|gb|EEP84224.1| putative hemY protein [Burkholderia mallei GB8 horse 4] gi|243060979|gb|EES43165.1| putative hemY protein [Burkholderia mallei PRL-20] Length = 396 Score = 66.9 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 52/398 (13%), Positives = 125/398 (31%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + L Sbjct: 3 LRGIIWLAVLFAIAAALATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++ AL L ++ A A K + Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRAEKAARDALAVDANQSAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + E + ++ L R D A Sbjct: 123 SLV-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K W+ + + + + + A+ L ++ E+ Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236 Query: 238 -DKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D+ + + +SL + + AA+ LI+ ++++A I+E N + Sbjct: 237 RDRRHDADALLEVWQSLSATERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A + + L + ++ + +A + A+ Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + ++ +SAL Sbjct: 354 KLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391 >gi|187466320|emb|CAQ51812.1| transmembrane and tetratricopeptide repeat containing 1 [Mus musculus] Length = 631 Score = 66.9 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 275 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 334 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 335 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 390 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 391 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 445 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + E + ++++ MG +A + PR E + L Sbjct: 446 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 505 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H K L + AL DP Sbjct: 506 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 534 >gi|260583213|ref|ZP_05850991.1| adenylate cyclase [Haemophilus influenzae NT127] gi|260093715|gb|EEW77625.1| adenylate cyclase [Haemophilus influenzae NT127] Length = 428 Score = 66.9 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMNEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVDIYLR----SKAYQALDK 208 >gi|146305324|ref|YP_001185789.1| HemY domain-containing protein [Pseudomonas mendocina ymp] gi|145573525|gb|ABP83057.1| HemY domain protein [Pseudomonas mendocina ymp] Length = 415 Score = 66.9 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 61/369 (16%), Positives = 124/369 (33%), Gaps = 25/369 (6%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 V + Y++ + L ++ + + L+ R LS + + Sbjct: 29 GYVLFAYQGFRYQSGLWAFLGLVLAVVVLYYLIKWTLRLLLSSTRLANPWSRLHRNRRVR 88 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLE 144 A GL+ +A A++ + ++ ++ L+Y L + A Q+ + E LE Sbjct: 89 LASEQGLLDLAEGRWARAQRQLTRAAE---ADSQPLMYYLGAARAANKLGQHEQSDELLE 145 Query: 145 MMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L E A+ + E R GD +A P V + + Y+ ++ Sbjct: 146 RALHKQPQAELAIALTHAELQRSRGDNEAALETLQVMRQRHPGHHLVLRQLQRLYLQRQD 205 Query: 204 WSRAITFLNQKKKNAK---------EWNRNRAILLIARSLENADKGDMIASYHDAIES-- 252 WS + L + +K E R L A + A + Sbjct: 206 WSALLGLLPELRKEKALPAAEIDELERETWRGRLADAGLAGQGQGETALQPLTQAWQQLS 265 Query: 253 --LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 L+ + + L + +AE +L K + +A Y L + + Sbjct: 266 APLRQEPELV---ATYVEQLRRLGAQEEAEEVLRSTLKRSYDSRLARFYGVLRGADPARQ 322 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI----APRKEIFLLLAQ 366 L+ A + + + L+ + ++ L+ +A ++K+ E+ LLAQ Sbjct: 323 LQTAELWLKQHPQDPALLLTLGRLCLQNQLWGKARDYFETSLKLERHPETCAELARLLAQ 382 Query: 367 IEQANSHNT 375 + + N Sbjct: 383 LGELERSNQ 391 >gi|222613085|gb|EEE51217.1| hypothetical protein OsJ_32045 [Oryza sativa Japonica Group] Length = 1004 Score = 66.9 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 89/300 (29%), Gaps = 43/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A E+ + ++ + P + S E GD+ +A+ +A Sbjct: 636 AAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMS-AKEKWLAGDVPAARAILQEAYASL 694 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P++ + A + E RA L++ ++ ++ R L N D+ Sbjct: 695 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEE---- 750 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 E LKL + + + KA+ + E K P + L Sbjct: 751 -RKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLE 809 Query: 305 ENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 E G K L + N + E + + L G+ +A A A++ P I Sbjct: 810 EKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGIL 869 Query: 362 LLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMPD 391 A I++ + DK W A+ PD Sbjct: 870 WAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPD 929 >gi|167835849|ref|ZP_02462732.1| HemY protein N-terminus family [Burkholderia thailandensis MSMB43] Length = 396 Score = 66.5 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 47/404 (11%), Positives = 121/404 (29%), Gaps = 34/404 (8%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + L Sbjct: 3 LRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ------QH 114 + R P + + ++ +L L ++ A A K Sbjct: 63 IVRNLWRMPQRVAAYRARMRNERAQASLRDALANLYAGRFSRAEKAARDALAVGSNQGAA 122 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLE--MMLQIPATREFAVYSLYFESCRIGDLNS 172 + + + E ++ ++ + +L R D Sbjct: 123 SLIAAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGR-----------DAEG 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + + ++ K W + + + + + A+ L + Sbjct: 172 ALAALAEMQASGGKRIHAQQIALRAQQQNKNWVEVLKI-AKALEKREALHPAAAVRLRQQ 230 Query: 233 SLENA------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + E+ D ++ + + + + AA+ LI+ ++++A I+E Sbjct: 231 AAEHLLRDRRHDADALLEVWQTLSAAERQSPRL---ADLAAELLIALERRQEARRIIEDA 287 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 N + + Y + + +++A + + L + ++ + +A + Sbjct: 288 LAHNWNARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQS 347 Query: 347 KAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 A+K+A + LA++ + ++ +SAL Sbjct: 348 FLEAALKLADDEPLRIRAHRALARLFEHLGETDKAAQHYRESAL 391 >gi|301169318|emb|CBW28917.1| predicted protoheme IX synthesis protein [Haemophilus influenzae 10810] Length = 428 Score = 66.5 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 76/246 (30%), Gaps = 15/246 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + L+++ V + V+ Y+ +K + L+ + + L Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLRSKAYQALDKILDNVANSGLFNDEEFKALRSKTE 232 Query: 234 LENADK 239 D+ Sbjct: 233 NGLLDE 238 >gi|18071414|gb|AAL58273.1|AC068923_15 putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gi|31432880|gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gi|125532522|gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group] Length = 1039 Score = 66.5 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 89/300 (29%), Gaps = 43/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A E+ + ++ + P + S E GD+ +A+ +A Sbjct: 671 AAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMS-AKEKWLAGDVPAARAILQEAYASL 729 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P++ + A + E RA L++ ++ ++ R L N D+ Sbjct: 730 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEE---- 785 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 E LKL + + + KA+ + E K P + L Sbjct: 786 -RKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLE 844 Query: 305 ENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 E G K L + N + E + + L G+ +A A A++ P I Sbjct: 845 EKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGIL 904 Query: 362 LLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMPD 391 A I++ + DK W A+ PD Sbjct: 905 WAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPD 964 >gi|167569225|ref|ZP_02362099.1| putative hemY protein [Burkholderia oklahomensis C6786] Length = 396 Score = 66.5 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 122/398 (30%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + V V I + S + + L Sbjct: 3 LRGIIWLAVLFAIAAGLATVGRFDTGQVLIVYPPYRVDVSLNFFVLAVIVVFIVLYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++ +L L ++ A A K Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAQASLRDALANLYAGRFSRAEKAARDALSVDANQGAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + E + ++ L R D A Sbjct: 123 SLI-----AAAATHRMHEYARRDEWLAKVSGQEWQDARLLATADMRADGRDAEGALAALA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K W+ + + + + + A+ L ++ E+ Sbjct: 178 EMQASGGKRIHAQQIALRAQQQLKNWAEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236 Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++ + + + + AA+ LI+ ++++A I+E N + Sbjct: 237 RDRRHDADALLEVWQSLSAAERQSPRL---ADLAAELLIALERRQEARRIVEGALAHNWN 293 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A E + L + ++ + +A + A+ Sbjct: 294 ARLLRRYPDTAGPDALPLIQKAEGWRRDRPEDADLLFALGRLCQQQQLWGKAQSFLESAL 353 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + + ++ +SAL Sbjct: 354 KLADDEPLKIRTHRALARLFERLGESDKAAQHYRESAL 391 >gi|190892419|ref|YP_001978961.1| exported protein, TonB-dependent receptor [Rhizobium etli CIAT 652] gi|190697698|gb|ACE91783.1| putative exported protein, TonB-dependent receptor [Rhizobium etli CIAT 652] Length = 1226 Score = 66.5 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 83/262 (31%), Gaps = 10/262 (3%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y A+ + N A ++ + + L + Q+A E +E Sbjct: 333 YGAIMQAYTAGFLENPRAALEIIKKAE-RRYPDDPTLPAV-RAQLAQLIDDRQQMKEAIE 390 Query: 145 MMLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L P + + Y + D++ A A++++P ++ Sbjct: 391 RSLALDPDHPMALSARAEYKAAY-ESDIDGALADLNHAIELAPGDSGALNSLGLLQSSR- 448 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A + K A E + +L ++ D+ M + + ++ L + +A Sbjct: 449 ---DANGEAEKAFKRAIELDPQDPLLHANLAMLYLDQSRMKEAKREIDTAIALDPSFDIA 505 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI-N 321 + + + ++ K+ L NP + + ++ L+ Sbjct: 506 LLVRGRYYLQSGERDKSLEDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADR 565 Query: 322 KESVESLVIVSKIALEMGSIDQ 343 ++ + + + A+++ D Sbjct: 566 LDNNDPAISAFRTAVDIDDYDA 587 >gi|94970032|ref|YP_592080.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94552082|gb|ABF42006.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 1096 Score = 66.5 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 100/301 (33%), Gaps = 48/301 (15%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + G+ AL A ++ A + Y Q + L Q+ + + +Y+ A Sbjct: 702 HKYGWDALAETYY--NAGDLNKA--IEYYKKQLEVNPYDDLANTGLAQVYMTQYKYDDAL 757 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + +I + A + D +A +A+ I P + + Y+ Sbjct: 758 AAFKKQAEINPLDKTAHLGIGQVDIIREDYKAAVPELERAVSILPQSSVARYMLGNAYLN 817 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHD----------- 248 + +AIT + K + N IA +L + D K D Y Sbjct: 818 TGQTEKAITAFEESVK--LDANNPMTWNDIAYALADKDVKLDKAEQYAQSSVSTTQSYLR 875 Query: 249 ---AIESLKLCDNSIMASICAAK------SLISQNKKRKAEVILEKIWKVNPHPEIAN-- 297 A ++LK + AA Q K+++AE + + +PH E+A Sbjct: 876 NLPAEQALKAGPQMT--ASLAAAWDTLGWVYYKQGKQKEAEEFIHAAFDQDPHSEVAEHL 933 Query: 298 -IYTH---------------LLSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGS 340 I+ L + + + + + L I VE+ + +K+ L+ Sbjct: 934 AIFAEKRNDKKAAAEYYAMALAGDRPAPRYREKLITLASIKDADVEAKIKEAKVKLDAER 993 Query: 341 I 341 Sbjct: 994 F 994 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 39/269 (14%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAV 157 + +A F Q A+ Y A E L ++ P + Sbjct: 657 DASVAG-AEKDAKADDLFD--------AAQAAVRAENYQNAIELLQRALVLEPEHKY-GW 706 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L GDLN A Y K L+++P + Q Y+ ++ A+ ++ Sbjct: 707 DALAETYYNAGDLNKAIEYYKKQLEVNPYDDLANTGLAQVYMTQYKYDDALAAFKKQ--- 763 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E N + + + D A+ + ++ + S +A + ++ + Sbjct: 764 -AEINPLDKTAHLGIGQVDIIREDYKAAVPELERAVSILPQSSVARYMLGNAYLNTGQTE 822 Query: 278 KAEVILEK----------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 KA E+ W +IA + KL +A + + + + +S Sbjct: 823 KAITAFEESVKLDANNPMTWN-----DIAYALA-----DKDVKLDKAEQYAQSSVSTTQS 872 Query: 328 LV--IVSKIALEMGSIDQAHAKAMLAMKI 354 + + ++ AL+ G Q A A Sbjct: 873 YLRNLPAEQALKAG--PQMTASLAAAWDT 899 >gi|145628424|ref|ZP_01784225.1| HemY [Haemophilus influenzae 22.1-21] gi|144980199|gb|EDJ89858.1| HemY [Haemophilus influenzae 22.1-21] Length = 428 Score = 66.5 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|309972635|gb|ADO95836.1| Conserved hypothetical protein [Haemophilus influenzae R2846] Length = 428 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|145639986|ref|ZP_01795585.1| HemY [Haemophilus influenzae PittII] gi|145270952|gb|EDK10870.1| HemY [Haemophilus influenzae PittII] gi|309751633|gb|ADO81617.1| Conserved hypothetical protein [Haemophilus influenzae R2866] Length = 428 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 ILNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|152982745|ref|YP_001354815.1| hypothetical protein mma_3125 [Janthinobacterium sp. Marseille] gi|151282822|gb|ABR91232.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 598 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 103/275 (37%), Gaps = 7/275 (2%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRY 176 L LL ++AL + +A + M++ TR A + + ++ A Sbjct: 69 PLLYKLLRAELALQRGDWQLA--YVSMLVTAQETRDPRLAERA-AKVALSAKQVSEALSA 125 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +++P++ + + +L A L ++ + A R +L++ Sbjct: 126 VRLWHELAPNSDEANQFYLGLIILGDNLKEARPILIERLRLASPQTR--GVLILEIQRLL 183 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 A+ D A++ E + + + A+S ++N +A K+ P E+A Sbjct: 184 ANTKDKNAAFALLEEVTTPYQDLVETHLALAQSAFTKNDIARANSEAHIALKLKPDMELA 243 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + L+ + N ++ E V +KI ++ DQA + +K P Sbjct: 244 ALMVAQSTSSRAEALQILTDFIKANPKAREVRVAYAKILIDNKQYDQAREQFEQLLKDDP 303 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L I A +++ + + L A+ D Sbjct: 304 KDLTILYAMGILGAQTNDIPMAEKYLSAYLQALED 338 >gi|307718665|ref|YP_003874197.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306532390|gb|ADN01924.1| TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 654 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 81/249 (32%), Gaps = 7/249 (2%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 L + + A + Y+ A E + +Q A L +G A Sbjct: 16 LAGEETSLQLFRQGEEARIQEDYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVA 75 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 A KA + P + ++ L + + ++ + + Sbjct: 76 LAGAEKAKSLDPRSTDNH--LLYARCLLA--LGRLEEAERIYRDILSREPQNVEAGMGIA 131 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVN 290 + +G + ++ + +L++ A + ++ KA LE+ + + Sbjct: 132 ELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRGERDKAASYLEEALRLYPSD 191 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P + +HL E + A R +++ +VE+ +++++A G +A Sbjct: 192 PEVHLLAASSHLRKEEWDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDG 251 Query: 351 AMKIAPRKE 359 + P Sbjct: 252 FLGARPDSR 260 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 78/303 (25%), Gaps = 62/303 (20%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + YK L S+ + + LA + + N +LL + LA + A Sbjct: 57 QAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTDN----HLLYARCLLALGRLEEAERI 112 Query: 143 LEM-MLQIPATREFAV--------YSLYFESCR-------------------------IG 168 + + P E + + R G Sbjct: 113 YRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRG 172 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + + A Y +AL + P P V ++ +EW A + E + L Sbjct: 173 ERDKAASYLEEALRLYPSDPEVHLLAASSHLRKEEWDEAEREARRAL-TLDENAVEASYL 231 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L + KG + L +S L ++ ++ ++ Sbjct: 232 LAQVATG---KGRFQEALDHLDGFLGARPDSREGWYLKGVILDRLDRPEESLRAFREV-- 286 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAK 347 ++ V + L E + E + A +A Sbjct: 287 -----------LERYPDDEVARYAMERILLERFPVSAPE------RRAAAGYHFTRAREY 329 Query: 348 AML 350 A Sbjct: 330 AEK 332 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 7/190 (3%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +++ RAI Q + + + + G + A ++ L S Sbjct: 35 QEDYHRAIELYQQAIQKNPAFVQAYK----GLAEAYFSLGQYEVALAGAEKAKSLDPRST 90 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRL 317 + A+ L++ + +AE I I P + L L+ R Sbjct: 91 DNHLLYARCLLALGRLEEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERT 150 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + E + L I++ + G D+A + A+++ P LLA D+ Sbjct: 151 LRMFPEHKKILTILAFLYEYRGERDKAASYLEEALRLYPSDPEVHLLAASSHLRKEEWDE 210 Query: 378 ILYWTQSALH 387 + AL Sbjct: 211 AEREARRALT 220 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 67/185 (36%), Gaps = 10/185 (5%) Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + ++ L + E + D + ++++ + A A++ S Sbjct: 11 LIVSPLAGEETSLQLFRQGEEARIQEDYHRAIELYQQAIQKNPAFVQAYKGLAEAYFSLG 70 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + A EK ++P H A L ++ R + ++VE+ + Sbjct: 71 QYEVALAGAEKAKSLDPRSTDNHLLYARCLLALGRLEEAERIYR--DILSREPQNVEAGM 128 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 +++++L G + A + +++ P K+I +LA + + Y + AL Sbjct: 129 GIAELSLARGQVASALREYERTLRMFPEHKKILTILAFLYEYRGERDKAASY-LEEALRL 187 Query: 389 -MPDP 392 DP Sbjct: 188 YPSDP 192 >gi|319775356|ref|YP_004137844.1| HemY porphyrin biosynthesis protein [Haemophilus influenzae F3047] gi|329122647|ref|ZP_08251226.1| HemY protein [Haemophilus aegyptius ATCC 11116] gi|317449947|emb|CBY86159.1| HemY porphyrin biosynthesis protein [Haemophilus influenzae F3047] gi|327472661|gb|EGF18090.1| HemY protein [Haemophilus aegyptius ATCC 11116] Length = 428 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|120553421|ref|YP_957772.1| HemY domain-containing protein [Marinobacter aquaeolei VT8] gi|120323270|gb|ABM17585.1| HemY domain protein [Marinobacter aquaeolei VT8] Length = 413 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 69/397 (17%), Positives = 147/397 (37%), Gaps = 22/397 (5%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+R++ + LV +++ + I+ GN L T+ +V L ++ + + L Sbjct: 1 MIRVLLILLLALLVGTGLSLGLTYDLGYIRISLGNYLIETNFWVGLGLILVIILLTVTLI 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 R F ++ + + N + + GL+++A N P ARK+ S + + Sbjct: 61 NTVRRFRQGTGVMAGWIARGNERRARRRTTRGLLALAEGNWPRARKLLSSSASHA---DT 117 Query: 120 YLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ L Q A + E L + AV L ++ Q AT Sbjct: 118 PLINYLAAAQAAFESGDHQAVDELLRKAFESTPGSSMAV-GLTQAQLQLAGNRPEQALAT 176 Query: 179 --KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILL 229 + SP P+V + + Y+ ++W + + +K + E R L Sbjct: 177 LLRLRKESPHHPFVLKLLKNAYLRLEDWRELSRLIPELRKRSVVPESELNELERQVWQNL 236 Query: 230 IARSLE---NADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVI 282 + ++ E + K + AS + A+ L + +AE + Sbjct: 237 LEQAAEECQRSRKENPEASLEPLTRLWDELPGFVRRDEYTIRDYARLLAGLGDEAQAETL 296 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 L K+ + + E+ N+Y + ++ +L A + + + E L+ + +++L Sbjct: 297 LRKVLRNHWSDELINLYGRIQGQDPEEQLLIAEQWLKHRTNNPELLLALGRLSLRNELWG 356 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 +A ++K+ +E L+++ I Sbjct: 357 KAREYFETSLKLRRNRETLAELSRLNAHMGEEEASIK 393 >gi|319897797|ref|YP_004135994.1| hemy porphyrin biosynthesis protein [Haemophilus influenzae F3031] gi|317433303|emb|CBY81678.1| HemY porphyrin biosynthesis protein [Haemophilus influenzae F3031] Length = 428 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GIARFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|78355835|ref|YP_387284.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218240|gb|ABB37589.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 866 Score = 66.1 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 65/199 (32%), Gaps = 7/199 (3%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G+ AR++ Q+ L L + +Y+ A + L+ Sbjct: 671 SLGVCMAGLGRHSEARRLFGEALQRDRRDVMTLYNL--GHVCQNMGEYDEARQYYRKCLK 728 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 FA+ L + + A++Y +A + + + + A Sbjct: 729 YDKEHVFALLRLGQMAEQEKKFGPARQYYNRAARLDGAQALTWRNLARLCMRQGRPDEAR 788 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAA 267 L+Q + AI L + + GD + A +++ L + A Sbjct: 789 EHLHQALIHNP----QDAISLQLLARLYLEGGDDPEVASVLARQAVALRPELKAGWLDLA 844 Query: 268 KSLISQNKKRKAEVILEKI 286 ++L + ++R+A L + Sbjct: 845 RALEATGRQREAAEALSRA 863 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 63/226 (27%), Gaps = 37/226 (16%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD +A AL + ++ S A + + +R Sbjct: 644 SQGDTFAAIEEYKLALLADENNTMAWNSLGVCMAGLGRHSEARRLFGEALQR----DRRD 699 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + L + G+ + + LK + A L+ + + E Sbjct: 700 VMTLYNLGHVCQNMGEYDEARQYYRKCLKYDKEHVFA-------LLRLGQMAEQEK---- 748 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K P A Y N +L A L N ++++ + G D+A Sbjct: 749 --KFGP----ARQY-----YNRAARLDGAQALTWRN---------LARLCMRQGRPDEAR 788 Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A+ P LLA++ + ++ A+ Sbjct: 789 EHLHQALIHNPQDAISLQLLARL-YLEGGDDPEVASVLARQAVALR 833 >gi|16272545|ref|NP_438760.1| HemY [Haemophilus influenzae Rd KW20] gi|260581416|ref|ZP_05849229.1| hemY protein [Haemophilus influenzae RdAW] gi|1170236|sp|P44772|HEMY_HAEIN RecName: Full=Protein hemY homolog gi|1573594|gb|AAC22260.1| hemY protein (hemY) [Haemophilus influenzae Rd KW20] gi|260091910|gb|EEW75860.1| hemY protein [Haemophilus influenzae RdAW] Length = 428 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GVTRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSA 173 ++ L++ + A A+ L I AT +L E + L +A Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIARTRILLQQNKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L+++ V + V+ Y+ S+A L++ Sbjct: 173 RSSVDSLLEMARRNKEVLKLAVEIYLR----SKAYQALDK 208 >gi|183238963|gb|ACC61051.1| tetratricopeptide repeat domain protein [uncultured bacterium] Length = 968 Score = 65.7 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 66/237 (27%), Gaps = 10/237 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q L A E E L+ + A+ L + + A + +A+ P Sbjct: 182 RGQAYLGLGDPAKAKEAFEQALKAQPGQLDALLGLARLAQADKHDDDATALSGQAIAQHP 241 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + A+ ++ + + ++ +G + Sbjct: 242 KDAEAYYFKGLLLKSRGQAAPALAAFDEALALKPDHR----TAHLEKAYLEIMQGKFEPA 297 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH 301 D + K +S+M A SQ K + A +L P +A T Sbjct: 298 QTDIAAARKTAPDSLMVIYTQALLDYSQGKFKAANDGLLKVLRVAPDHMPTVLLAGA-TQ 356 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L + K + E +++ I L A + + P + Sbjct: 357 LKLGSLAQAEKHLQKYVEFAPGDPYGRKLLATILL-QEKRPNDAAAVLAPLLKQPTQ 412 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 69/243 (28%), Gaps = 15/243 (6%) Query: 122 VYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L + + + + + Q P E + L +GD SA++ KA Sbjct: 78 ALLSDAAKFQQKGDSKGSLIQWKNASAQEPNNAEARLR-LGKLYNDMGDPVSAEKELRKA 136 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + A A+ Q + ++ A+ L R G Sbjct: 137 SSLGAPASATLPALAQALLAQGKFQMALDETQAATAKGDAAA------LSVRGQAYLGLG 190 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY- 299 D + ++LK + A + A+ + A + + + HP+ A Y Sbjct: 191 DPAKAKEAFEQALKAQPGQLDALLGLARLAQADKHDDDATALSGQA--IAQHPKDAEAYY 248 Query: 300 ----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L + + + + + + + G + A A K A Sbjct: 249 FKGLLLKSRGQAAPALAAFDEALALKPDHRTAHLEKAYLEIMQGKFEPAQTDIAAARKTA 308 Query: 356 PRK 358 P Sbjct: 309 PDS 311 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 4/159 (2%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A A + H + L + ++A +QY A ++ E +L+I Sbjct: 799 GAGQQKDADARLAQWQAAHPAD--VVTLLYLAESSMAGKQYKNAIKQYEAILKIDPANTI 856 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ +L + + D A +AL ++P + + V +R + L Q Sbjct: 857 ALNNLAWAYYQEKD-ARALATGEQALRLNPKGAATLDTLGWMLVEQGNLTRGLPMLKQAV 915 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 A + R L A + + DK A + S K Sbjct: 916 ALAPDAPELRFHLASAMNK-SGDKAGARAELEKLLASNK 953 >gi|332971036|gb|EGK10007.1| HemY protein [Kingella kingae ATCC 23330] Length = 398 Score = 65.7 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 58/384 (15%), Positives = 122/384 (31%), Gaps = 16/384 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M +LI + ++ I + + Y +V I + R + + + L + A ++ Sbjct: 1 MKQLIWIIVLFAIAIGLALAATTYSGNVYIVIEQTMLRVNLHLFVLGLIGAVVALYIVVK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNE 119 + LS P L R K +AL ++ A + V N Sbjct: 61 LFAGVLSTPDKLSRFGIGRRSRKATQALNAAGLAFFEGKFQEAETQAAKVLANKEAGGNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L +L A + L + ++P+ + + Y L E + A + Sbjct: 121 VLALMLAAHAADQSGNQKTRDQYLHDIAKLPSKAQLSRYLLLAESALNQHQYEIADEHLK 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLEN 236 A I+P + ++ + + A+ L++ K + A N A L R+ E Sbjct: 181 AAAQINPRLTRLVRLQLRWALDKGD---ALEVLDKVDKLRRAGAMNDTEAEHLSQRAYEQ 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA---SICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 A LK + + S A+ + +A + + + + Sbjct: 238 LLNLVSDNRGMKAC--LKRIPEHLKSGEMSATIAQKYVQLGLYSQAIAWVNQHYPAQHNA 295 Query: 294 EIANIYT----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ + +L + A N L + ++A +A Sbjct: 296 DLLPAFVQSSQYLDEHGQQKAIDTADAWLRSNPNDARLLRHLGELAATRQLWGKARGYLE 355 Query: 350 LAMKIAPRKEIFLLLAQIEQANSH 373 ++ I L LA++ + + Sbjct: 356 ASLAIEHSVPAHLTLAKVLEQSGQ 379 >gi|240949411|ref|ZP_04753752.1| HemY-like protein [Actinobacillus minor NM305] gi|240296160|gb|EER46816.1| HemY-like protein [Actinobacillus minor NM305] Length = 416 Score = 65.7 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 74/205 (36%), Gaps = 15/205 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + + ++ + V I ++ S +++ + + Sbjct: 1 MFRVLFLMLLVLAALIAGPYLAGHQGYVRIETDTKVIEMSLVMLVVFFVSAMAVLYAVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K LM ++ + A K+ S ++ +E Sbjct: 61 AITRFFRLSKGSYDWFFNRKQKKAQKETLEALMRMSEGDYSKAEKLFSKNAKHA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSA 173 ++ L++ + A A++ L I A++ + ++ E R G L +A Sbjct: 118 VLNLIKAAEAAQQRGDDFEANKYL-----IEASKLGGMNNVAVELARAKILVQQGKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQY 198 + L+++P+ V ++ Y Sbjct: 173 RSAIDSLLELAPNNTEVLRLAIRIY 197 >gi|253698929|ref|YP_003020118.1| hypothetical protein GM21_0276 [Geobacter sp. M21] gi|251773779|gb|ACT16360.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21] Length = 624 Score = 65.7 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 108/298 (36%), Gaps = 16/298 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 AR+ + + +Q + V LA A E L+ +Y+ Sbjct: 288 SKAAREYEALLLKQ---PDAPGVREKLGDALLAAGHDGEAIAAYEEALRRKEGSSAVLYN 344 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L R GDL+ A R ++A+ + P+ + + + + + + AI + + Sbjct: 345 LGTLYERKGDLDQAMRRFSEAIRLDPEYGDARRRLAEIHSVRGDLNAAI----AQYRELV 400 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + + + + ++++L +S +A A+ + + + +A Sbjct: 401 SRHGDNPLSYYKLARLYEQGRQYADAIAAYSKAIELDQDSEVAHQGIARLYLKRKQAEEA 460 Query: 280 EVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 E L ++ +++P H E + ++Y + KL E+N +S + I Sbjct: 461 EKHLLEVLRLDPKHAEARELLISLYVKARRYDDTEKL--LKASAELNPDSANDQYRLGVI 518 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G+ D A + A+++ P L ++ +K +A A PD Sbjct: 519 YAFRGNNDGAREQYQKALELKPDHARALNALGKLYLRLGQ-KEKAREALAAARKADPD 575 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 6/194 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A + + +H + L Y ++ RQY A +++ E A Sbjct: 387 GDLNAAIAQYRELVSRH--GDNPLSYYKLARLYEQGRQYADAIAAYSKAIELDQDSEVAH 444 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + A+++ + L + P E ++ YV A+ + L + Sbjct: 445 QGIARLYLKRKQAEEAEKHLLEVLRLDPKHAEARELLISLYVKARRYDDTEKLLKASAEL 504 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + ++ L + + +G+ + ++L+L + A K + +K Sbjct: 505 NPDSANDQYRLGVIYA----FRGNNDGAREQYQKALELKPDHARALNALGKLYLRLGQKE 560 Query: 278 KAEVILEKIWKVNP 291 KA L K +P Sbjct: 561 KAREALAAARKADP 574 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 34/263 (12%), Positives = 84/263 (31%), Gaps = 18/263 (6%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF-AVYSLY 161 +++ + + + + L+ ++ A ++ + + P E L Sbjct: 52 QRLEAEKKVEKLCADGGAAHYLKGLALETAQRQEEAVDEYRTAVKKEPKLAEAHGRLGLL 111 Query: 162 F-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E + + A+KA A A+ + A+ ++ A++ Q Sbjct: 112 LFEKGAREEASVELFEASKANADPAYAR----ALGDIFQAAQLYALALSQYQQAL----P 163 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 A L + + G+ + IE+L+L ++ A + A + ++A Sbjct: 164 QYGKDAKLRVGMARSYLGFGERAKARDLLIEALRLDPANLPARLELAGIYKGDKRYQEAL 223 Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 L + +P H +A + + E R +E E + + + Sbjct: 224 EQLRQASASHPEDRDVHFRLARLLDLMGEEKLADAQYRQAGMERAAS--PEEHLKKAALY 281 Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358 + + +A + + P Sbjct: 282 RQGTAFSKAAREYEALLLKQPDA 304 >gi|148678797|gb|EDL10744.1| cDNA sequence BC023818 [Mus musculus] Length = 569 Score = 65.7 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 86/270 (31%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 213 LTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDFADAY 272 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 273 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 328 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 329 AIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSP---LGALYYN--T 383 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + E + ++++ MG +A + PR E + L Sbjct: 384 GRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 443 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H K L + AL DP Sbjct: 444 LSAIHSKQEH-HGKALEAIEKALQLKPKDP 472 >gi|83718445|ref|YP_441430.1| HemY protein N-terminus family protein [Burkholderia thailandensis E264] gi|167618305|ref|ZP_02386936.1| HemY protein N-terminus family [Burkholderia thailandensis Bt4] gi|257139894|ref|ZP_05588156.1| HemY protein N-terminus family protein [Burkholderia thailandensis E264] gi|83652270|gb|ABC36333.1| HemY protein N-terminus family [Burkholderia thailandensis E264] Length = 396 Score = 65.3 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 124/398 (31%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + A L Sbjct: 3 LRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++ + +L L ++ A A K Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQAAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + E + ++ L R D A Sbjct: 123 SLI-----AAAATHRMHEYARRDEWLAKVNGQEWQDARLLATADMRADGRDAEGALAALA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K WS + + + + + A+ L ++ E+ Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWSEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236 Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++ + + + + AA+ LI+ ++++A I+E N + Sbjct: 237 RDRRHDADALLEVWQTLSATERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A + + L + ++ + +A + A+ Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + ++ +SAL Sbjct: 354 KLADDEPLKIRAHRALARLFEHLGETDKAAQHYRESAL 391 >gi|269961755|ref|ZP_06176115.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833538|gb|EEZ87637.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 391 Score = 65.3 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + +A + A + E +++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + +V Y +EW +AI + NQ Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168 Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R RA + ++ + G+ + ++L + ASI + + Sbjct: 169 KMGKKRTRIRANIAHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRIYLE 228 Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +LE K + + P IA Y HL E+ + + RA ++ Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 S ++++++ S+ A + P + F L I +A + Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|120586927|ref|YP_961272.1| TPR repeat-containing protein [Desulfovibrio vulgaris subsp. vulgaris DP4] gi|120564341|gb|ABM30084.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4] Length = 886 Score = 65.3 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 14/262 (5%) Query: 102 LARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 LA++ + Q+ ++ + + +A A E L + A Sbjct: 342 LAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPA 401 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L G + A A+ +PD V A+ ++ + + + + + + Sbjct: 402 LLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNALFAYHLGRGDTGKGVQVVLEGLR 461 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 AIL + GD + ++ + + A + + + Sbjct: 462 GTP----QDAILYTMLVPVYVNMGDEAKALDAVAQAHRADPDFPDAYLAGLRLHAGAGRA 517 Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333 +A E P P LL T R + + V++ Sbjct: 518 EQALAESEAYLARKPDAPGFLLASGALLDLLGRTAEADARFDK--ALAANDPRVSFAVAE 575 Query: 334 IALEMGSIDQAHAKAMLAMKIA 355 A+ G ++A + A++ Sbjct: 576 RAVASGQDEKARSVLEEALRQH 597 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 23/273 (8%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPAT 152 ++A+ AR + +QH L L +Q+A + + A + Q P Sbjct: 577 AVASGQDEKARSVLEEALRQH--DQTTLRDALAIQLARM-GKPDDALALYTAIETQRPRE 633 Query: 153 REFAVYSLYFESCR-IGDLNSAQRYAT-KALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 Y L R ++A+ ++ P + Sbjct: 634 ALLGRYRLLTHLDRHQEAADTARELGRRESASPLPVLLEAAAFERMGQRPQG-----VAL 688 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + + + LL+A GD + ++LK + + + A Sbjct: 689 LEAAHRKSGDPE-----LLLAMGGMLERNGDEARAETCYRDALKARPDHVPTLLAYAGLD 743 Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI--NKE 323 + + + KA + EK + P +A Y S + + L L+ + Sbjct: 744 MRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQAYTRAPD 803 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + + G D A A+ P Sbjct: 804 NPAVLDTLGVCMMANGRADDAARAFGRAVVAVP 836 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 22/310 (7%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIP 150 + A A + + L + + A + + L P Sbjct: 510 LHAGAGRAEQALAESEAYLARK--PDAPGFLLASGALLDLLGRTAEADARFDKALAANDP 567 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + G A+ +AL D + +A+ Q + A+ Sbjct: 568 RVSFA----VAERAVASGQDEKARSVLEEALRQH-DQTTLRDALAIQLARMGKPDDALAL 622 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A+L R L + D+ + A E + S + + A + Sbjct: 623 YTA----IETQRPREALLGRYRLLTHLDRHQ--EAADTARELGRRESASPLPVLLEAAAF 676 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESL 328 ++ + +LE + + PE+ + + + + + V +L Sbjct: 677 ERMGQRPQGVALLEAAHRKSGDPELLLAMGGMLERNGDEARAETCYRDALKARPDHVPTL 736 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH--NTDKILYWTQ 383 + + + + +A A A+ IAP + L +A +E+A+ + Q Sbjct: 737 LAYAGLDMRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQ 796 Query: 384 SALHAMPDPL 393 + A +P Sbjct: 797 AYTRAPDNPA 806 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 101/340 (29%), Gaps = 31/340 (9%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A +A PD P A ++ + A +A+ + + Sbjct: 481 GDEAKALDAVAQAHRADPDFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGF--L 538 Query: 228 LLIARSLENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L L+ + + A+ + + A+ ++ + KA +LE+ Sbjct: 539 LASGALLDLLGRTAEADARFDKALAANDPRVSFA-----VAERAVASGQDEKARSVLEEA 593 Query: 287 WKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + + + A L +E E+L+ ++ + +A Sbjct: 594 LRQHDQTTLRDALAIQLARMGKPDDALALYTAIETQRP--REALLGRYRLLTHLDRHQEA 651 Query: 345 HAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402 A + + +LL A E+ L ++A DP + G + Sbjct: 652 ADTARELGRRESASPLPVLLEAAAFERMGQRPQGVAL--LEAAHRKSGDPELLLAMGGML 709 Query: 403 SVW--LPLSPISKTLCYFEWKIPTKSPEYIS-----------SENINFSLEMAYPADDLQ 449 + + P P ++ ++ + A D Sbjct: 710 ERNGDEARAETCYR-DALK-ARPDHVPTLLAYAGLDMRRKEYAKATALYEKAVSIAPDDV 767 Query: 450 SMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGI 489 LNN +L + ++ + + L + R PD+P + Sbjct: 768 VALNNLAMAYLEKASRDATPQKALRLALQAYTRAPDNPAV 807 >gi|261495985|ref|ZP_05992400.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308361|gb|EEY09649.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica serotype A2 str. OVINE] Length = 414 Score = 65.3 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 17/202 (8%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 ++ L+ ++ V I + S +++ + LL + Sbjct: 3 LLLVGLISG--PYLAGNQGYVRIETATTVIEMSIVMLVVFFVLAMAVVYLLEWIVTKICR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ N A K+ S ++ +E ++ L++ Sbjct: 61 MSNGAYNWFSTRKHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSAQRYATKA 180 + A A++ L I AT ++ E R G L +A+ Sbjct: 118 AEAAQQNGDDLAANKYL-----IKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSL 172 Query: 181 LDISPDAPWVTEAVVQQYVLAK 202 L+++P + V +Q Y ++ Sbjct: 173 LELAPHSDEVLRLAIQIYKESR 194 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 12/134 (8%) Query: 186 DAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + ++ + +S+A ++ K+A E + LI + GD + Sbjct: 73 KHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHADEP----VLNLIKAAEAAQQNGDDL 128 Query: 244 ASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA-N 297 A+ I++ ++ N++ + + L+ Q K A ++ + ++ PH + +A Sbjct: 129 AANKYLIKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQ 188 Query: 298 IYTHLLSENTVGKL 311 IY + + +L Sbjct: 189 IYKESRAYVALDRL 202 >gi|238918083|ref|YP_002931597.1| protoheme IX biogenesis protein [Edwardsiella ictaluri 93-146] gi|238867651|gb|ACR67362.1| HemY protein, putative [Edwardsiella ictaluri 93-146] Length = 399 Score = 65.3 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 58/391 (14%), Positives = 119/391 (30%), Gaps = 21/391 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML+++ F ++ I +++ + V I + TS ++ +L + A L Sbjct: 1 MLKVLLLFIILIAGIVLGPMLAGHQGYVLIQTDSYNIETSVTSLVIMLILLMLALFALEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R L A R + + GL+ + + K+ + + Sbjct: 61 LLRRLLRTGARTRGWFIGRKRTRARRQTCAGLLKLTEGDYGQVEKLLARNADHA--DQPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172 + YLL + A A++ LE + + TR G+ ++ Sbjct: 119 VNYLLAAEAAQQRGDELRANQYLERAAEVAGSDPLPVDITRV-------RLQLARGENHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAIL 228 A+ L+ +P P V Q Y+ + + L K + + + Sbjct: 172 ARHGVDALLNYAPRHPEVLRLAEQAYLRTDAFGPLLEILPALAKQGLHSDDDIEKLQIRA 231 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I + G + + + + A+ LI + A+ I+ K Sbjct: 232 YIGLMDQAMANGGSEELKQWWKAQRRTTRHETVLQVALAEHLIECDDHGAAQQIVVDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + L S N K + + S + ++ + G QA Sbjct: 292 RRFDERLVQLMPQLKSGNPEQLEKLLQQQIRQHGASALLNSTLGQLLMRHGEWQQAAEVL 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+K P + LA + Sbjct: 352 RAALKQRPDPYDYAWLADTLDKLHRPEEAAQ 382 >gi|115482752|ref|NP_001064969.1| Os10g0498600 [Oryza sativa Japonica Group] gi|113639578|dbj|BAF26883.1| Os10g0498600 [Oryza sativa Japonica Group] Length = 428 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 89/300 (29%), Gaps = 43/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A E+ + ++ + P + S E GD+ +A+ +A Sbjct: 60 AAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMS-AKEKWLAGDVPAARAILQEAYASL 118 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P++ + A + E RA L++ ++ ++ R L N D+ Sbjct: 119 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEE---- 174 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 E LKL + + + KA+ + E K P + L Sbjct: 175 -RKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSLANLE 233 Query: 305 ENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 E G K L + N + E + + L G+ +A A A++ P I Sbjct: 234 EKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPTSGIL 293 Query: 362 LLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMPD 391 A I++ + DK W A+ PD Sbjct: 294 WAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAPD 353 >gi|307546842|ref|YP_003899321.1| porphoryin biosynthesis protein HemY [Halomonas elongata DSM 2581] gi|307218866|emb|CBV44136.1| K02498 HemY protein [Halomonas elongata DSM 2581] Length = 417 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 54/383 (14%), Positives = 127/383 (33%), Gaps = 28/383 (7%) Query: 1 MLRLIRYFFVISLVICSFI-IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M +LI V + ++ P + G+ ++T+ + L +L+ L Sbjct: 1 MRKLILIVVVGLAIGALLGQLIMSVPGYWLVRVGDTSFQTTFWFGLVLLFAAFVVLHFLL 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + + + GL+++A A K + + Sbjct: 61 RLLMRLSRPVSRFKGWSSRSRNRSAMRRTVRGLVALAEGRWKRAEKALVKAADDSS---T 117 Query: 120 YLVYLLEVQ-IALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFES---CRIGDLNS 172 LV L A + +Y A L+ + T ++ Sbjct: 118 PLVNYLSAALAAHYQGRYEQADTLLKRAHLSTEGADT-AVG----MMQAQLMLDRQQYEE 172 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRN 224 A T+ P+ P V + + Q Y+ +W + + +++ + R Sbjct: 173 ALAILTRLDRHLPNHPQVLKQLKQAYLSVSDWEGLRRLMPRLGAQQLISQEEREQLEQRA 232 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ + E D + + D + L+ + I + ++L+ +++ AE +L Sbjct: 233 YRELIAQEAREAGDIEQVRTLWADMPDHLRGNVDLI---VLYVEALVRGDQQAIAERLLR 289 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + K + + Y LL + +L A + + + L+ + +++L +A Sbjct: 290 QSLKDHWDSRLILRY-GLLEVDAARQLVVAEKWLQERPNDPDLLLTLGRLSLRNAYWGKA 348 Query: 345 HAKAMLAMKIAPRKEIFLLLAQI 367 + + P + LA++ Sbjct: 349 QEYFEASHRQRPSGVVCAELARL 371 >gi|254498738|ref|ZP_05111454.1| truncated protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella drancourtii LLAP12] gi|254352066|gb|EET10885.1| truncated protoporphyrinogen IX and coproporphyrinogen III oxidase HemY [Legionella drancourtii LLAP12] Length = 315 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 90/264 (34%), Gaps = 9/264 (3%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L YL + A + + E +P + + A Sbjct: 36 DTPLLNYLTAARAAQKMGDSQL-RDDFLREAQQSMPEAKIAVELTQAQLQLANHQWEQAL 94 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---RAILLIA 231 DI+P P+V + ++Q Y ++W + I L KK + Sbjct: 95 ATLRHLHDIAPRHPYVLKLLMQLYQEVRDWPQLIALLPDLKKYNVMDHAEFESLQHNAYL 154 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++L + K + + SL + A+ L+ N A+ +L + + + Sbjct: 155 QALTDLVKQNQSGAVTTLFHSLPKSLATDPNIVAEYARFLLKNNDNTTAKDLLRRSLRKD 214 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 HP++ +Y L S+ +L A L + + S + + ++ ++ +A Sbjct: 215 FHPQLIALYGRLPSDE--KQLVFAESLLKKHSHSAALYLCLGQLCIKQQLWGKAKHYLEQ 272 Query: 351 AMKIAPRKEIFLLLAQIEQANSHN 374 + ++ P +L L ++ + Sbjct: 273 SNELEPSPLAYLTLGKLHEKLGDP 296 >gi|71908057|ref|YP_285644.1| TPR repeat-containing protein [Dechloromonas aromatica RCB] gi|71847678|gb|AAZ47174.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] Length = 923 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 94/271 (34%), Gaps = 13/271 (4%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGD 169 + L+ Q + + + A KL+ +L+ T + R Sbjct: 260 RKIAPKHPQTLYLDAQASYQRKDFQGARSKLQDLLKFNTNNPT-ALQLAGAVEFQLRS-- 316 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A+ Y KAL +P+ +V Y+ + ++A+ L A + LL Sbjct: 317 YMQAETYLNKALSQAPELRLARRILVATYLRNGQAAKALNTLQPMLDKADT----DSALL 372 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 GD + ++ KL N A + ++Q A LE+I + Sbjct: 373 TLAGETYLQNGDAKKAEEYFAKASKLDPNDPGKKTSIALTHLAQGDVSGAVEDLEQIAQT 432 Query: 290 NP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 + ++A I T + + LK LE+ ++ + + ++ L + A + Sbjct: 433 DKGVRADLALISTFIRTNQADKALKAIDSLEKKQPDNPATHNLRAQTLLLKKDLAGARSS 492 Query: 348 AMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 A+KI P LA+I+ A D Sbjct: 493 YEAALKINPAFFPAAASLAKIDLAEKKPDDA 523 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 87/279 (31%), Gaps = 34/279 (12%) Query: 87 ALYTGLMSI---AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 AL T L++ + P E+L + Sbjct: 11 ALTTALLAAFLGGCGDSP---------ESLIASSREFLAK---------NDNKAAVIQLK 52 Query: 144 EMMLQIP---ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + Q P R +L GD A+ KA D+ T + + + Sbjct: 53 NALQQNPSLGEARFLLGKTL----LETGDAAGAEVELRKAQDLKYSPEQTTPLLAKAMLG 108 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A + A +++ K + A L S+ +G+ A+ ++LK + Sbjct: 109 AGQ---AKKLIDEFGKTDSLSGESLAALKTTLSVAYLIQGNQDAAQSALSDALKAQPDFA 165 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRL 317 A + A+S ++ A+ ++ ++ + NP H + N + L + Sbjct: 166 PALLSLARSKVTNRDIDGAQALVAQVLEKNPKNHDALLLNGSLQGVKSGPEAALAEYRKA 225 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E + + + + D+A + KIAP Sbjct: 226 IEAKPDFIAGHAALITTLFQQQKFDEASTQLDALRKIAP 264 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 7/165 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +A+ N A +M + ++H LV+ + +A A + Y++A + L I Sbjct: 753 LASGNPQEAGRMAAAWQKEHPKDIALLVH--QGDVATARKDYSLAAQHYRQALDIQPNNA 810 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + +L + S + A YA KA ++P P + + E RAI L Sbjct: 811 LVLNNLAWVSGELKAP-KAIEYAEKANQLAPGQPQFMDTLAMLLAQKGETKRAIDLLRNA 869 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A + + + G+ + + KL D Sbjct: 870 MNAAPNAASIQ----LNLAKVLISAGEKKEARKELEALAKLGDKF 910 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 70/219 (31%), Gaps = 22/219 (10%) Query: 86 KALYTG---------LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 KAL L++ N A+ +++ + + L + L Sbjct: 326 KALSQAPELRLARRILVATYLRNGQAAKALNTLQPMLDKADTDSALLTLAGETYLQNGDA 385 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ----RYATKALDISPDAPWVTE 192 A E ++ S+ GD++ A + A + D ++ Sbjct: 386 KKAEEYFAKASKLDPNDPGKKTSIALTHLAQGDVSGAVEDLEQIAQTDKGVRADLALIST 445 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + +AI L +K+ + + RA L+ K D+ + + Sbjct: 446 FIRTNQADKA--LKAIDSLEKKQPDNPATHNLRAQTLLL-------KKDLAGARSSYEAA 496 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 LK+ A+ AK +++ K A+ E + +P Sbjct: 497 LKINPAFFPAAASLAKIDLAEKKPDDAKKRFENVLLADP 535 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 95/291 (32%), Gaps = 37/291 (12%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A ++ A ++ ++ L + + LA + + A + L+ L+I + A Sbjct: 620 AGDLNQALASYTKLAALQ--PASPLPLVRTADVHLANKNKDEAAKSLKKALEIKSDLVEA 677 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + N A + A + P + +K W+ A K Sbjct: 678 QRGLILLALDAKKPNEALQIAQQIEKQRPKEAVGFALEGDIHATSKNWTEAANAYRNAIK 737 Query: 217 NAKEWN---RNRAILLIA--------RSLENADK-----------GDMIASYHD---AIE 251 A + + ++LL + + + GD+ + D A + Sbjct: 738 RAGSADIAIKLHSVLLASGNPQEAGRMAAAWQKEHPKDIALLVHQGDVATARKDYSLAAQ 797 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENT 307 + + + +L + + KA +E K N P+ + LL++ Sbjct: 798 HYRQALDIQPNNALVLNNLAWVSGELKAPKAIEYAEKANQLAPGQPQFMDTLAMLLAQKG 857 Query: 308 VGKLKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKI 354 KRA+ L + + + ++K+ + G +A + K+ Sbjct: 858 ET--KRAIDLLRNAMNAAPNAASIQLNLAKVLISAGEKKEARKELEALAKL 906 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 90/285 (31%), Gaps = 9/285 (3%) Query: 103 ARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 A K + + + + L Q L ++ A E L+I A SL Sbjct: 452 ADKALKAIDSLEKKQPDNPATHNLRAQTLLLKKDLAGARSSYEAALKINPAFFPAAASLA 511 Query: 162 FESCRIGDLNSAQRYATKALDISPDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + A++ L P + P + + + + + Sbjct: 512 KIDLAEKKPDDAKKRFENVLLADPKSVPALLALAELKAANKGSVDEVAGLIGKAITSNPT 571 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R L+ L + + + +DA ++K I A + N+ + Sbjct: 572 EISPRLALIQYY-LSQKETKKALGAANDAAAAIKDKPEIIDALGRTQQMAGDLNQALASY 630 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 L + +P P + HL ++N K + EI + VE+ + +AL+ Sbjct: 631 TKLAALQPASPLPLVRTADVHLANKNKDEAAKSLKKALEIKSDLVEAQRGLILLALDAKK 690 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 ++A A K P++ + L WT++A Sbjct: 691 PNEALQIAQQIEKQRPKEAVGFAL------EGDIHATSKNWTEAA 729 >gi|260771620|ref|ZP_05880540.1| HemY-like protein [Vibrio metschnikovii CIP 69.14] gi|260613397|gb|EEX38596.1| HemY-like protein [Vibrio metschnikovii CIP 69.14] Length = 393 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 57/386 (14%), Positives = 123/386 (31%), Gaps = 16/386 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RL+ V+ L + + V I+ N S ++ ++ L L Sbjct: 1 MIRLLFLLVVLGLGLFVGTQYAGQQGYVLISIANTSIEMSVTTLIIMMVALLAGLFFLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + L + ++ R + + G++ + + A K + + H Sbjct: 61 LIKKILRASSSTWNWFTIRKQRRSRRYTDEGMIKLLEGDWKQAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L YL + A + + L + + P + + +A T Sbjct: 119 LCYLAAAEAAHEQGDQRKRDDYLTLAAKQPNATLAVELTRAKQLLSDQAWQAAVDILTPL 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 PD V + + Q Y+ ++W + L K A+ ++A L ++ + Sbjct: 179 AQAYPDNILVLKRLKQAYLALEQWQP-LLALIPKLTKAQLLTPSQADALTLQAQQAML-- 235 Query: 241 DMIASYHDAIESLKLCDNSIMASI---------CAAKSLISQNKKRKAEVILEKIWKVNP 291 I + E L S+ ++ + L Q A +L++ P Sbjct: 236 -SIVATQGGSEGLLTYWQSLPKTLKNETRLMVEVIEQLLQRQADL-AAFKLLKEWLNKQP 293 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+ L ++ + +K + E+ + +I L+ Q+ A Sbjct: 294 TTELYRFLPKLTLKDKQPLIALLQDKLRRDKNNAEAHSALGQILLDEKQWAQSQQHLEQA 353 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDK 377 + + E + LAQ + Sbjct: 354 LSLRVNIEDYACLAQALEQQDRPQAA 379 >gi|92115221|ref|YP_575149.1| HemY-like protein [Chromohalobacter salexigens DSM 3043] gi|91798311|gb|ABE60450.1| HemY-like protein [Chromohalobacter salexigens DSM 3043] Length = 409 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 62/412 (15%), Positives = 133/412 (32%), Gaps = 28/412 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M +LI V V F + P + G+ +TS ++ L IL Sbjct: 1 MRKLILLIVVGLAVGALFGQLMQSMPGYWLVRVGDTSIQTSFWLGLVILLAVFLVLHFAL 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + R + L + K GL+++A A K + + Sbjct: 61 RLLRRLRRPVSRLKVWNSRTRNRNAMKRTVRGLVALAEGRWKRAEKDLVKAADDSS---T 117 Query: 120 YLVYLLEVQ-IALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDL---NSA 173 LV L A + +++ A L+ ++ + D A Sbjct: 118 PLVNYLSAALAAHYQGRFDHADTLLKRAHHSTEGADSAVG----MVQAQLMLDRQQFEEA 173 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAIL- 228 T+ P+ P V + + Q Y+ +W L Q+ +E Sbjct: 174 LATLTRLEKQLPNHPQVLKLLRQAYLSVNDWEGLRHLLPKLDKQQLITEEERQELEQRAY 233 Query: 229 --LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LI ++++ D+ + + + + + ++L+ ++ AE +L Sbjct: 234 RELILQAVQRQPNADVNRVRNLWADMPDYLRSDVELVVLYTEALVKGGEEAIAERLLRHS 293 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K + + Y LL+ + +L A + + + L+ + +++L +A Sbjct: 294 LKEHWDTRLVLRY-GLLNVDAGRQLAYAEKWLQERPNDPDLLLTLGRLSLRNAYWGKAQE 352 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQ--ANSHNTD----KILYWTQSALHAMPDP 392 + + P + LA++ + + + +L A+P P Sbjct: 353 YFEASQRQRPSGVVCAELARLYANLGEHQKSQLFYRQSVELLDRSLPALPQP 404 >gi|156975130|ref|YP_001446037.1| hypothetical protein VIBHAR_02857 [Vibrio harveyi ATCC BAA-1116] gi|156526724|gb|ABU71810.1| hypothetical protein VIBHAR_02857 [Vibrio harveyi ATCC BAA-1116] Length = 391 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 112/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + +A + A + E +++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + +V Y +EW +AI + NQ Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168 Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R RA + ++ + G+ + ++L + ASI + + Sbjct: 169 KMGKKRTRIRANIAHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRVYLE 228 Query: 273 ----QNKKRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ + +LE K + + P IA Y HL E+ + + RA ++ Sbjct: 229 SEYYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 S ++++++ S+ A + P + F L I +A + Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|115372068|ref|ZP_01459380.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310824743|ref|YP_003957101.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115371033|gb|EAU69956.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309397815|gb|ADO75274.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 395 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 94/255 (36%), Gaps = 12/255 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + + ++ AR+ +++ L+ L ++A+ + + A L+ A E Sbjct: 10 LKSGDVQQAREEAEGAFRRNPADRRALIAL--AKLAVLDGEAAKAESYLQKAAGGSAEDE 67 Query: 155 FAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 V L S + G+ AQ +K P + A + + A L Sbjct: 68 VDV-GLVRASLLMQRGEAGPAQALYSKLTQSQPPRAEAFYGLGFLLAEAGDNTAACAALE 126 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + A+ + + ++ +SL+L + + + A +L + Sbjct: 127 RAVQLEPGG----AVYHFQLARVLFALARLKEAFQHLEQSLRLNPGHVPSYLVFAIALQA 182 Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLV 329 + AE IL + KV P P + +++L+ + G ++ A L + + +L Sbjct: 183 GGELEAAEDILRQGLKVAPDEPHLLKALSNVLAGKGDFPGAVEAAETLARVQPDHPSALS 242 Query: 330 IVSKIALEMGSIDQA 344 +++ + + +A Sbjct: 243 NLARFRMAQRNFPEA 257 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 10/199 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GD+ A+ A A +P A+ + VL E ++A ++L + + E + Sbjct: 10 LKSGDVQQAREEAEGAFRRNPADRRALIALAKLAVLDGEAAKAESYLQKAAGGSAEDEVD 69 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 ++ + ++ + G A Y +S A L A LE Sbjct: 70 VGLVRASLLMQRGEAGPAQALYSKLTQSQ---PPRAEAFYGLGFLLAEAGDNTAACAALE 126 Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + ++ P H ++A + L + + +N V S ++ + G Sbjct: 127 RAVQLEPGGAVYHFQLARVLFALAR--LKEAFQHLEQSLRLNPGHVPSYLVFAIALQAGG 184 Query: 340 SIDQAHAKAMLAMKIAPRK 358 ++ A +K+AP + Sbjct: 185 ELEAAEDILRQGLKVAPDE 203 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 6/174 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YL+ A + A + L L++ + +L GD A A Sbjct: 172 SYLVFAIALQAGGELEAAEDILRQGLKVAPDEPHLLKALSNVLAGKGDFPGAVEAAETLA 231 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + PD P + + + + + A+ + + + + +R++ A E + D Sbjct: 232 RVQPDHPSALSNLARFRMAQRNFPEALALCRKLSERGQATSLSRSV--EAMIYETQEPPD 289 Query: 242 MIASYHDAIESLKLCD-NSIMASICAAKSLISQNKK---RKAEVILEKIWKVNP 291 + A+ ++KL + A+ L ++A+ LE+ + P Sbjct: 290 LKAAVAAWRSAMKLDPQDWGPANNLGLLLLTRMEGPEVQKQAQEALEEALRRAP 343 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 19/200 (9%), Positives = 62/200 (31%), Gaps = 6/200 (3%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + + + +A + +R I L ++ + + + A + Sbjct: 6 FEALLKSGDVQQAREEAEGAFRRNP-ADRRALIALAKLAVLDGEAAKAESYLQKA--AGG 62 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKL 311 ++ + + A L+ + + A+ + K+ + P A + + + Sbjct: 63 SAEDEVDVGLVRASLLMQRGEAGPAQALYSKLTQSQPPRAEAFYGLGFLLAEAGDNTAAC 122 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 R ++ ++++ + + +A ++++ P L+ I Sbjct: 123 AALERAVQLEPGGAVYHFQLARVLFALARLKEAFQHLEQSLRLNPGHVPSYLVFAIALQA 182 Query: 372 SHNTDKILYWTQSALHAMPD 391 + + L PD Sbjct: 183 GGELEAAEDILRQGLKVAPD 202 >gi|157825836|ref|YP_001493556.1| hypothetical protein A1C_03875 [Rickettsia akari str. Hartford] gi|157799794|gb|ABV75048.1| hypothetical protein A1C_03875 [Rickettsia akari str. Hartford] Length = 334 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 105/304 (34%), Gaps = 28/304 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ ++ + V I+ + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGCTLIESFDSKVFISLYDYNIETTLFFSLILWLLLLISCFIVIK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P+ + ++ +KR + AL +++ A + K S +++ E Sbjct: 61 FLILIIDLPSTIHNIFNKRKINHERYAL---ILAFA--EYIMNNKAKSASIARNSLAYEA 115 Query: 121 LVYLLEVQI------ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L + Q A+ E + + ++ + +L A+ Sbjct: 116 LK---DSQASHNLILAVTEEDIDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSLYEKAE 172 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARS 233 YATKA +++ +++ Y W++ I N+ K + + A + + Sbjct: 173 NYATKAYNLNELDSDNLITLMRCYARFSLWTKFIFITNKLAKFHKHDSMPEIAEYYLLAA 232 Query: 234 LENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIW 287 + + + + AI+ D + + + N K K IL+ + Sbjct: 233 KQEIESNNTANAIDYLDTAIDLNFYNDELL-------EFYFNLNDKLNVNKKTKILKDAF 285 Query: 288 KVNP 291 ++ P Sbjct: 286 RIIP 289 >gi|145633833|ref|ZP_01789556.1| adenylate cyclase [Haemophilus influenzae 3655] gi|148827894|ref|YP_001292647.1| heme-biosynthesis protein HemY [Haemophilus influenzae PittGG] gi|229847502|ref|ZP_04467597.1| HemY [Haemophilus influenzae 7P49H1] gi|144985336|gb|EDJ92171.1| adenylate cyclase [Haemophilus influenzae 3655] gi|148719136|gb|ABR00264.1| HemY [Haemophilus influenzae PittGG] gi|229809565|gb|EEP45293.1| HemY [Haemophilus influenzae 7P49H1] Length = 428 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 9/168 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ + + + + +S V I NR+ S ++ L Sbjct: 1 MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTLVIFFIISLAIIYAFEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R K K GL+ + + A K+ ++ E Sbjct: 61 GITRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAKAEKLIGKNAKHSA---EP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 ++ L++ + A A+ L I AT +L E R Sbjct: 118 VLNLIKAAEAAQQRGDEFSANRYL-----IEATELAGSDNLLVEIART 160 >gi|153833361|ref|ZP_01986028.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01] gi|148870370|gb|EDL69296.1| tetratricopeptide repeat family protein [Vibrio harveyi HY01] Length = 391 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + +A + A + E +++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMASGFLDRAEKIFEQLVEEPDHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + +V Y +EW +AI + NQ Sbjct: 143 AL----------------------------------QQLVTIYQQTREWEKAIHYANQLA 168 Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R RA + ++ + G+ + ++L + ASI + + Sbjct: 169 KMGKKRTRIRANIAHFWCELAMLDQADGNTSKAIQHFKKALSEDPKCVRASIALGRVYLE 228 Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +LE K + + P IA Y HL E+ + + RA ++ Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVS--- 285 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 S ++++++ S+ A + P + F L I +A + Sbjct: 286 SELMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|147919209|ref|YP_687056.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon RC-I] gi|110622452|emb|CAJ37730.1| hypothetical protein RCIX2685 [uncultured methanogenic archaeon RC-I] Length = 365 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 17/275 (6%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A N+ A K + + + + A +L+ L+I + Sbjct: 62 ATGNLEEAEKSFK--DALRIDDKHPGAHSDLGNLYYCLGRLDEALAELQRSLEIDPQQHL 119 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A Y L R+ + A K + + P A+ + Y L AI Sbjct: 120 AHYRLGLVYLRMDRDDEAIEELKKTISLKPSYADAYTALGRTYGLQGRLDEAIAAFRHAI 179 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A+ L + KGD+ + + E+++L + +L + K Sbjct: 180 AEKP----QDAVCHFDLGLALSMKGDLDPANTEFAEAIRLDPEFPDPHMAMGSNLFTDGK 235 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIY--THLLSENTVGKLKRALRLEEINKESVESL 328 +A + ++NP H ++A +Y L+ E +K + E+ Sbjct: 236 LNEAAFEFREAIRLNPYLEEAHLKLAQVYEQKGLMGEA----VKEYREALAVQPGMYEAN 291 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + ++ + +G ++A + A + P I L Sbjct: 292 LSLGRVHMTLGRYEEAIRELASAAEARPESAIAYL 326 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 12/257 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 QY+ A L++ A Y L C G+L A++ AL I P Sbjct: 26 YAMSGQYDNALAHFHKALKLKPDCTDAYYGLACVQCATGNLEEAEKSFKDALRIDDKHPG 85 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y A+ L + E + + + L + + Sbjct: 86 AHSDLGNLYYCLGRLDEALAELQRSL----EIDPQQHLAHYRLGLVYLRMDRDDEAIEEL 141 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304 +++ L + A ++ Q + +A P H ++ + Sbjct: 142 KKTISLKPSYADAYTALGRTYGLQGRLDEAIAAFRHAIAEKPQDAVCHFDLGLA-LSMKG 200 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 + + A + ++ E + + + G +++A + A+++ P +E L Sbjct: 201 DLDPANTEFAEAI-RLDPEFPDPHMAMGSNLFTDGKLNEAAFEFREAIRLNPYLEEAHLK 259 Query: 364 LAQIEQANSHNTDKILY 380 LAQ+ + + + Sbjct: 260 LAQVYEQKGLMGEAVKE 276 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 13/104 (12%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L E+ + +AL + P ++ + ++ + AI ++ +A Sbjct: 268 GLMGEAVKE---------YREALAVQPGMYEANLSLGRVHMTLGRYEEAI----RELASA 314 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 E AI + + G + + ++LKL + A Sbjct: 315 AEARPESAIAYLELGNAFSKLGFEKEAKQNYEKALKLDPSLESA 358 >gi|149908494|ref|ZP_01897156.1| Uncharacterized enzyme of heme biosynthesis [Moritella sp. PE36] gi|149808328|gb|EDM68265.1| Uncharacterized enzyme of heme biosynthesis [Moritella sp. PE36] Length = 390 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 117/371 (31%), Gaps = 13/371 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R I ++ + V I G+ + + + ++ F FA + + A Sbjct: 1 MVRFIVLIALLLAGAIVAPYLIGNKGYVMIAAGDYIIDATVSSAVIMVVGFYFALLAIEA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + G++++ + + A + +++ Sbjct: 61 LINKLTHSLGWFNRYHQARAKIQ----TEKGILALVSGDFKKAETLTLKAAKKARV--PV 114 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA--T 178 L YL Q A E L + L+ AV L +I Q + + Sbjct: 115 LNYLTAAQSAQELGNERKRDEYLLLALENADKNTLAVE-LTQAKLQIQQQQFEQAFVSLS 173 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234 P V + KEW + + + QK + E + Sbjct: 174 TLHGKYPKHKVVLALFKDVCIERKEWGQLLALIPPLQKQKLLTSNEADELSKHSHFQHLG 233 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 E A + K + A L+ +N + A +++ +PE Sbjct: 234 EVAKQQGSTGLLDTWSALPKTLKHDGRYLAETASLLMGRNDHQSAYLLMMDALSNELYPE 293 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + L + ++R RL++ + S V + ++ ++ G ++A + + Sbjct: 294 LIRLTPKLNLTDYHALIERLKRLQKTREGSGLLAVCIGQLMVKEGRWNEAVDELSQGISQ 353 Query: 355 APRKEIFLLLA 365 +P + LA Sbjct: 354 SPSTSAYCALA 364 >gi|254483252|ref|ZP_05096484.1| HemY N-terminal domain protein [marine gamma proteobacterium HTCC2148] gi|214036475|gb|EEB77150.1| HemY N-terminal domain protein [marine gamma proteobacterium HTCC2148] Length = 416 Score = 65.0 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 131/390 (33%), Gaps = 27/390 (6%) Query: 1 MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M +L + LV + V P + + +GN TS +V + +L F L Sbjct: 1 MRKLFALLLIALLVGVGIVAVIETDPGYILVAYGNYTAETSLWVGIVLLAVFTLLIYLTL 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + R L L + R + GL+S N AR+ + Sbjct: 61 RLVRRLLGGQQSLASWIGGRRVRASSRLTTRGLISFIEGNWTRARR--QLLRGAKNSEAP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRY 176 + YL+ + + + + E L A E + ++ G A Sbjct: 119 LVNYLMAARSSYRLNEPDKMREYLGA--AEDAESEAGIAVELTQAELRLHSGQFEQALAT 176 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIAR 232 +A + P+V + + + Y K+W ++ L K +A+ + + Sbjct: 177 LVRARRNAGRHPYVLDLLHRAYYGLKDWQELVSLLPELKKYKVLSAEALEKLEREIYTEM 236 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAK----SLISQNKKRKAEVI----LE 284 + +A D + A +++ + + A L+ AE + L+ Sbjct: 237 LISSAQGDDSGDALQQAWQAM---PAHLKQNASALDKYVALLVKGGHHATAEKVIPRALK 293 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + W + Y ++L +++ +L +A + E + L+ + +++ +A Sbjct: 294 QTWDSK----LVREYGYVLGQDSAKQLAQAENWLPAHTEDAQLLLCLGRLSAREKLWGKA 349 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + ++ EI L ++ A Sbjct: 350 RDYFESSYRLERSAEICAELGRLLVALGEP 379 >gi|218710952|ref|YP_002418573.1| HemY protein [Vibrio splendidus LGP32] gi|218323971|emb|CAV20333.1| HemY protein [Vibrio splendidus LGP32] Length = 393 Score = 64.6 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 54/363 (14%), Positives = 115/363 (31%), Gaps = 20/363 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R I F V+ + S V I+ N+ S ++ + L A L Sbjct: 1 MIRWIFLFLVLGAGLIVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIALLAALFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + G++ + + A K + + H Sbjct: 61 LFKKLMYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYAT 178 L YL+ Q A + + +K + AV L +I + +A Sbjct: 119 LCYLVASQAAHEQGNTSE-RDKYIELASQQEDSLLAVE-LTKAKQQISESNYEAA---FD 173 Query: 179 KALDISPDAPWVTEAVVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 ++ P AV+ Y+ K W + L K K I L ++ Sbjct: 174 TLSNLKGSHP-NNTAVLGLLKATYMQLKLWQPLLE-LTPKLAKNKLLTAEEQIELEQKAQ 231 Query: 235 -----ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + A + + + S C K LI++ +A ++++ Sbjct: 232 CGLLHDVAQQQGSEGLISHWNKLSRKQKQSSHLVSCFVKQLIARKADSEAFTVIKENIAK 291 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + E+ + L + + R + + E+ +++ L +A Sbjct: 292 SGSNELYMLLPELNLPDHHPVVVMLERAISKDNGNAEAHSALAQFYLREQKWSEAQTHFE 351 Query: 350 LAM 352 A+ Sbjct: 352 KAL 354 >gi|254360507|ref|ZP_04976656.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica PHL213] gi|153091047|gb|EDN73052.1| porphoryin biosynthesis protein HemY [Mannheimia haemolytica PHL213] Length = 421 Score = 64.6 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 15/190 (7%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 ++ V I + S +++ + LL + ++ R Sbjct: 20 YLAGNQGYVRIETATTVIEMSIVMLVVFFVLAMAVVYLLEWIVTKICRMSNGAYNWFSTR 79 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNI 138 + K + GLM ++ N A K+ S ++ +E ++ L++ + A Sbjct: 80 KHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHA---DEPVLNLIKAAEAAQQNGDDLA 136 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSAQRYATKALDISPDAPWVTE 192 A++ L I AT ++ E R G L +A+ L+++P + V Sbjct: 137 ANKYL-----IKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSLLELAPHSDEVLR 191 Query: 193 AVVQQYVLAK 202 +Q Y ++ Sbjct: 192 LAIQIYKESR 201 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 12/134 (8%) Query: 186 DAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + ++ + +S+A ++ K+A E + LI + GD + Sbjct: 80 KHKKAQQETLEGLMRMSEGNYSKAEKLFSKNAKHADEP----VLNLIKAAEAAQQNGDDL 135 Query: 244 ASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA-N 297 A+ I++ ++ N++ + + L+ Q K A ++ + ++ PH + +A Sbjct: 136 AANKYLIKATEIAGPNNVAVELVRTRILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQ 195 Query: 298 IYTHLLSENTVGKL 311 IY + + +L Sbjct: 196 IYKESRAYVALDRL 209 >gi|152997596|ref|YP_001342431.1| HemY domain-containing protein [Marinomonas sp. MWYL1] gi|150838520|gb|ABR72496.1| HemY domain protein [Marinomonas sp. MWYL1] Length = 409 Score = 64.6 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 128/393 (32%), Gaps = 31/393 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M +L+ ++ V ++ V + + TS +V++ + LF + Sbjct: 1 MRKLLFLLVIMMAVGGVLGLLMRQDSGYVLVAYNGVTIETSLWVLVVAMVIALFVLSWVK 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + L L + + + G++ + N A K+ + +++ ++ Sbjct: 61 RILFIALRPSNSLAKVTGNLAQKRASRNTIRGMLELVGGNWNKAEKLLTNSAEKVSY--- 117 Query: 120 YLVYLL-EVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ + A + ++ + L P ++ + A Sbjct: 118 PLINYIGAAYAASEQDEHERSKALLRSAHKSTPEAEFAIGFAQSQIQIKQEHYEGALASL 177 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS-LEN 236 + + P V + +V Y K+W A+ L K ++ + + L + L Sbjct: 178 LRLQKLKPKHKQVLKMLVTVYKQLKDWD-ALLTLTPILKKDGIFDDDNMLELERNAFLAL 236 Query: 237 ADK-------GDMIASYHDAIES--LKLC----DNSIMASICAAKSLISQNKKRKAEVIL 283 DK G +E+ KL D+ + A +LI KAE + Sbjct: 237 LDKIKFRNKLGQNKKELVAEVENLWNKLDTLSQDDRM--RQLYAHTLIHFGDDAKAESFI 294 Query: 284 EKI----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 W E+ Y ++ +NT L + S ++ +++ M Sbjct: 295 RNSLNNRWSD----ELVYEYGNIKQDNTKKLLTHCENWLKKEPASANLYLVCGRLSQSMM 350 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 +A A+ + + E L+++ +A Sbjct: 351 LWGKARDYYEQALSLDTQNEALAELSRLLKAMG 383 >gi|307718362|ref|YP_003873894.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306532087|gb|ADN01621.1| TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 653 Score = 64.6 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 16/252 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + + L + Y+L A YA KA+D++P Sbjct: 410 TYYLAGRLQDAEKAFKEALSTEEGSNDPISAYNLALVLIEEDKAQEALSYAQKAVDLAPR 469 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + ++ A + + ++ + R L L + DKG+ + Sbjct: 470 VPEYQYTLGLAAYKLGAYTVAEAAFGKAIELKPDYVKPRVQL----GLLHQDKGEDDKAL 525 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTH 301 +E+ KL S + + ++ + +P +A Y Sbjct: 526 SLLLEAYKLDPTSFEVNNNLGNLYARKKLYSESIKHYRAAIEADPKDTLVRYNLALSYLD 585 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + ++ L +I+ ++ + K+ + + + A ++ P + Sbjct: 586 AKEYDEAVRV--FQELLKIDPSYWDAYYQLGKLLITLEDAEGAKKVLSTLLEKKPD---Y 640 Query: 362 LLLAQIEQANSH 373 A++E+ S Sbjct: 641 SRRAEVEKLLSG 652 >gi|46562211|ref|YP_009076.1| TPR domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46447748|gb|AAS94414.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 915 Score = 64.6 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 14/262 (5%) Query: 102 LARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 LA++ + Q+ ++ + + +A A E L + A Sbjct: 371 LAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPA 430 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L G + A A+ +PD V A+ ++ + + + + + + Sbjct: 431 LLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNALFAYHLGRGDTGKGVQVVLEGLR 490 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 AIL + GD ++ + + A + + + Sbjct: 491 GTP----QDAILYTMLVPVYVNMGDEAKGLDAVAQAHRADPDFPDAYLAGLRLHAGAGRA 546 Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333 +A E P P LL T R + + V++ Sbjct: 547 EQALAESEAYLARKPDAPGFLLASGALLDLLGRTAEADARFDK--ALAANDPRVSFAVAE 604 Query: 334 IALEMGSIDQAHAKAMLAMKIA 355 A+ G ++A A++ Sbjct: 605 RAVASGQDEKARRVLEEALRQH 626 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 83/273 (30%), Gaps = 23/273 (8%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPAT 152 ++A+ AR++ +QH L L +Q+A + + A + Q P Sbjct: 606 AVASGQDEKARRVLEEALRQH--DQTTLRDALAIQLARM-GKPDDALALYTAIETQRPRE 662 Query: 153 REFAVYSLYFESCR-IGDLNSAQRYAT-KALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 Y L R ++A+ ++ P + Sbjct: 663 ALLGRYRLLTHLDRHQEAADTARELGRRESASPLPVLLEAAAFERMGQRPQG-----VAL 717 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + + + LL+A GD + ++LK + + + A Sbjct: 718 LEAAHRKSGDPE-----LLLAMGGMLERNGDEARAETCYRDALKARPDHVPTLLAYAGLD 772 Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI--NKE 323 + + + KA + EK + P +A Y S + + L L+ + Sbjct: 773 MRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQAYTRAPD 832 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + + G D A A+ P Sbjct: 833 NPAVLDTLGVCMMANGRADDAARAFGRAVVAVP 865 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 95/310 (30%), Gaps = 22/310 (7%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIP 150 + A A + + L + + A + + L P Sbjct: 539 LHAGAGRAEQALAESEAYLARK--PDAPGFLLASGALLDLLGRTAEADARFDKALAANDP 596 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + G A+R +AL D + +A+ Q + A+ Sbjct: 597 RVSFA----VAERAVASGQDEKARRVLEEALRQH-DQTTLRDALAIQLARMGKPDDALAL 651 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A+L R L + D+ + A E + S + + A + Sbjct: 652 YTA----IETQRPREALLGRYRLLTHLDRHQ--EAADTARELGRRESASPLPVLLEAAAF 705 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESL 328 ++ + +LE + + PE+ + + + + + V +L Sbjct: 706 ERMGQRPQGVALLEAAHRKSGDPELLLAMGGMLERNGDEARAETCYRDALKARPDHVPTL 765 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH--NTDKILYWTQ 383 + + + + +A A A+ IAP + L +A +E+A+ + Q Sbjct: 766 LAYAGLDMRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQ 825 Query: 384 SALHAMPDPL 393 + A +P Sbjct: 826 AYTRAPDNPA 835 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 7/201 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+++ + A + + +++ F + L +L+ +A + Y +A + + + Sbjct: 266 GLLALQTGDEAGAAAVAASMNKD--FKDNSLTLMLDGALAAQRKDYTLAASLFQRSVAM- 322 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 Y L GDL +A + L+ +P+ V + + + A Sbjct: 323 RPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVAEARQE 382 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + E N + A + GD + L L + A + ++ Sbjct: 383 AQK----LVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRLK 438 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 + + +A L+ P Sbjct: 439 QADGRPDEALEDLKAAVVAAP 459 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 99/324 (30%), Gaps = 38/324 (11%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A+ + + + L R A LE + + A R +L Sbjct: 140 AKALPHLARYEQGAGETAVSRELAGLAHAQARSPEEARAALERSIALDAKRVTPRLALAR 199 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKE 220 GDL A +AL ++P+ + + A+ + + Sbjct: 200 LFLYRGDLKRAVATVDEALAVAPEDRLALTLRGDLLLRQGDAPGALVVFRKVASLAPGDD 259 Query: 221 WNRNRAILLIARSLENADKGDMIAS-------------YHDAIESLKLCDNSIMASICAA 267 + R + LL ++ + A + AS A+ + + A+ Sbjct: 260 YARYMSGLLALQTGDEAGAAAVAASMNKDFKDNSLTLMLDGALAAQRKDYTL--AASLFQ 317 Query: 268 K----------------SLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTV 308 + +L + A ++ + P + A + L Sbjct: 318 RSVAMRPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVA 377 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367 + A +L E N + +++ + G A + + P LL L+++ Sbjct: 378 EARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRL 437 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 +QA+ + + ++A+ A PD Sbjct: 438 KQADGRPDEALED-LKAAVVAAPD 460 Score = 36.5 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 100/340 (29%), Gaps = 31/340 (9%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD +A PD P A ++ + A +A+ + + Sbjct: 510 GDEAKGLDAVAQAHRADPDFPDAYLAGLRLHAGAGRAEQALAESEAYLARKPDAPGF--L 567 Query: 228 LLIARSLENADKGDMIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L L+ + + A+ + + A+ ++ + KA +LE+ Sbjct: 568 LASGALLDLLGRTAEADARFDKALAANDPRVSFA-----VAERAVASGQDEKARRVLEEA 622 Query: 287 WKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + + + A L +E E+L+ ++ + +A Sbjct: 623 LRQHDQTTLRDALAIQLARMGKPDDALALYTAIETQRP--REALLGRYRLLTHLDRHQEA 680 Query: 345 HAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402 A + + +LL A E+ L ++A DP + G + Sbjct: 681 ADTARELGRRESASPLPVLLEAAAFERMGQRPQGVAL--LEAAHRKSGDPELLLAMGGML 738 Query: 403 SVW--LPLSPISKTLCYFEWKIPTKSPEYIS-----------SENINFSLEMAYPADDLQ 449 + + P P ++ ++ + A D Sbjct: 739 ERNGDEARAETCYR-DALK-ARPDHVPTLLAYAGLDMRRKEYAKATALYEKAVSIAPDDV 796 Query: 450 SMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGI 489 LNN +L + ++ + + L + R PD+P + Sbjct: 797 VALNNLAMAYLEKASRDATPQKALRLALQAYTRAPDNPAV 836 >gi|330820193|ref|YP_004349055.1| TPR repeat-containing protein [Burkholderia gladioli BSR3] gi|327372188|gb|AEA63543.1| TPR repeat-containing protein [Burkholderia gladioli BSR3] Length = 786 Score = 64.6 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 100/283 (35%), Gaps = 28/283 (9%) Query: 94 SIAAHNIPLARKMHSYV----SQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQ 148 +A ++ A + + Q + + + + Q A E +L+ Sbjct: 74 HLARGHVFAAAQCFAEAIGAYRQALALDADSIDAHFALASALQSAGQAAPAIEAYTALLE 133 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 R A+ +L ++G+ +AQ +AL++ P + + + ++ Sbjct: 134 RDPARVDALNNLGNCHRQLGEHQAAQAAYLRALELQPGDADALTNLGTLALATGQLDESV 193 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L ++ A + ++L + G+ S +L L A+ A Sbjct: 194 ALLEMARQVAPDSP----VVLANLGVALHRHGEFARSAALLTRTLALDPVFPEAAYNLAN 249 Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLS-ENTVGKLKRALRLEEINK 322 +L + ++R+A ++ + P H + + +Y S + A+RL Sbjct: 250 ALHALGRRREALDHYQRAIEQAPAHADAYNNLGVVYQEAGSLHDAADAFDTAIRLR---- 305 Query: 323 ESVESLVIVSKIALE-----MGSIDQAHAKAMLAMKIAPRKEI 360 S + + L +G++D+A A+ A+ + PR Sbjct: 306 ----SAFLAALNNLAVTMRMLGAMDEAEARLRDALAVDPRHSA 344 >gi|326796194|ref|YP_004314014.1| HemY domain protein [Marinomonas mediterranea MMB-1] gi|326546958|gb|ADZ92178.1| HemY domain protein [Marinomonas mediterranea MMB-1] Length = 413 Score = 64.6 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 128/386 (33%), Gaps = 27/386 (6%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 V I + TS +V+++ + L L +V + + + K + Sbjct: 27 GYVLIAFKGVTIETSLWVMVAAMIVTLIILNSLKSVLFTLIRPSSSFNKVTAKLVQKRAS 86 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE- 144 K G++ + N A K+ + +++ + Y+ A + + + E L Sbjct: 87 KNTIRGMLELVGGNWKRAEKLLTTSAEK--VPYPLINYIGAAYAASEQDDHTRSKELLRI 144 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 P ++ + G SA + + P + + +V Y K+W Sbjct: 145 AHKSAPEAEFAIGFAQSQIQVKQGHYESALATLLRLNKLKPKHRQILKMLVTVYTQLKDW 204 Query: 205 SRAITFLNQKKKNAK-------EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + KN E RN + L+ R G AS +E++ Sbjct: 205 DALLALKPTLTKNGIFDETNMLELERNAFLALLERITFQTKIGKDKASLVKELEAVWQKL 264 Query: 258 NSI----MASICAAKSLISQNKKRKAEVILE----KIWKVNPHPEIANIYTHLLSE---- 305 +S+ + A SLI ++AE + K W ++A +Y L S Sbjct: 265 DSLEKDNEIRLLYASSLIQFGDDKRAESYIRQSLNKEWSD----DLAKLYGTLGSGVEVK 320 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 N L +A + S + +++ ++ +A A+ + E LA Sbjct: 321 NAKKALSQAESWLKKEIGSANLYLTCGRLSQQLKLWGKAKDYYQSALALDSDSEALPELA 380 Query: 366 QIEQANSHNTDKILYWTQSALHAMPD 391 ++ +A + S + A D Sbjct: 381 RLLKAM-GDEPASQSLLLSQIKAPDD 405 >gi|257465327|ref|ZP_05629698.1| HemY-like protein [Actinobacillus minor 202] gi|257450987|gb|EEV25030.1| HemY-like protein [Actinobacillus minor 202] Length = 416 Score = 64.6 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 74/205 (36%), Gaps = 15/205 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + + ++ + V I ++ S +++ + + Sbjct: 1 MFRVLFLMLLVLAALIAGPYLAGHQGYVRIETDTKVIEMSLVMLVVFFVSAMAVLYAVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R + + GLM ++ + A K+ S ++ +E Sbjct: 61 AITRFCRLSKGSYDWFFNRKHKNAQQETLEGLMRMSEGDYSKAEKLFSKNAKYA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSA 173 ++ L++ + A A+ L I A++ + ++ E R G L +A Sbjct: 118 VLNLIKAAEAAQQRGDDFEANRYL-----IEASKLGGMNNVAVELARAKILVQQGKLPAA 172 Query: 174 QRYATKALDISPDAPWVTEAVVQQY 198 + L+++P+ V ++ Y Sbjct: 173 RSAIDSLLELAPNNTEVLRLAIRIY 197 >gi|28898801|ref|NP_798406.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus RIMD 2210633] gi|260365325|ref|ZP_05777876.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030] gi|260880825|ref|ZP_05893180.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034] gi|260897845|ref|ZP_05906341.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466] gi|28807020|dbj|BAC60290.1| putative heat shock protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087595|gb|EFO37290.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus Peru-466] gi|308093631|gb|EFO43326.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AN-5034] gi|308111243|gb|EFO48783.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus K5030] Length = 391 Score = 64.6 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E +++ P Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y E+ + +V Y +EW +AI + NQ Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIHYANQLA 168 Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + +R R A ++ + G+ + ++L + ASI + + Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRASISLGRIYLE 228 Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ +LE K + + P IA Y HL E+ + + RA +++ S E Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 ++++++ S+ A + P + F L I +A + Sbjct: 288 --LMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|311235415|gb|ADP88268.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris RCH1] Length = 886 Score = 64.2 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 14/262 (5%) Query: 102 LARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 LA++ + Q+ ++ + + +A A E L + A Sbjct: 342 LAQRRVAEARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPA 401 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L G + A A+ +PD V A+ ++ + + + + + + Sbjct: 402 LLQLSRLKQADGRPDEALEDLKAAVVAAPDDLAVRNALFAYHLGRGDTGKGVQVVLEGLR 461 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 AIL + GD ++ + + A + + + Sbjct: 462 GTP----QDAILYTMLVPVYVNMGDEAKGLDAVAQAHRADPDFPDAYLAGLRLHAGAGRA 517 Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333 +A E P P LL T R + + V++ Sbjct: 518 EQALAESEAYLARKPDAPGFLLASGALLDLLGRTAEADARFDK--ALAANDPRVSFAVAE 575 Query: 334 IALEMGSIDQAHAKAMLAMKIA 355 A+ G ++A A++ Sbjct: 576 RAVASGQDEKARRVLEEALRQH 597 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 83/273 (30%), Gaps = 23/273 (8%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPAT 152 ++A+ AR++ +QH L L +Q+A + + A + Q P Sbjct: 577 AVASGQDEKARRVLEEALRQH--DQTTLRDALAIQLARM-GKPDDALALYTAIETQRPRE 633 Query: 153 REFAVYSLYFESCR-IGDLNSAQRYAT-KALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 Y L R ++A+ ++ P + Sbjct: 634 ALLGRYRLLTHLDRHQEAADTARELGRRESASPLPVLLEAAAFERMGQRPQG-----VAL 688 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + + + LL+A GD + ++LK + + + A Sbjct: 689 LEAAHRKSGDPE-----LLLAMGGMLERNGDEARAETCYRDALKARPDHVPTLLAYAGLD 743 Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI--NKE 323 + + + KA + EK + P +A Y S + + L L+ + Sbjct: 744 MRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQAYTRAPD 803 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + + G D A A+ P Sbjct: 804 NPAVLDTLGVCMMANGRADDAARAFGRAVVAVP 836 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 95/310 (30%), Gaps = 22/310 (7%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIP 150 + A A + + L + + A + + L P Sbjct: 510 LHAGAGRAEQALAESEAYLARK--PDAPGFLLASGALLDLLGRTAEADARFDKALAANDP 567 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + G A+R +AL D + +A+ Q + A+ Sbjct: 568 RVSFA----VAERAVASGQDEKARRVLEEALRQH-DQTTLRDALAIQLARMGKPDDALAL 622 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A+L R L + D+ + A E + S + + A + Sbjct: 623 YTA----IETQRPREALLGRYRLLTHLDRHQ--EAADTARELGRRESASPLPVLLEAAAF 676 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESL 328 ++ + +LE + + PE+ + + + + + V +L Sbjct: 677 ERMGQRPQGVALLEAAHRKSGDPELLLAMGGMLERNGDEARAETCYRDALKARPDHVPTL 736 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH--NTDKILYWTQ 383 + + + + +A A A+ IAP + L +A +E+A+ + Q Sbjct: 737 LAYAGLDMRRKEYAKATALYEKAVSIAPDDVVALNNLAMAYLEKASRDATPQKALRLALQ 796 Query: 384 SALHAMPDPL 393 + A +P Sbjct: 797 AYTRAPDNPA 806 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 7/201 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+++ + A S F + L +L+ +A + Y +A + + + Sbjct: 237 GLLALQTGD--EAGAAAVAASMNKDFKDNSLTLMLDGALAAQRKDYTLAASLFQRSVAM- 293 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 Y L GDL +A + L+ +P+ V + + + A Sbjct: 294 RPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVAEARQE 353 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + E N + A + GD + L L + A + ++ Sbjct: 354 AQK----LVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRLK 409 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 + + +A L+ P Sbjct: 410 QADGRPDEALEDLKAAVVAAP 430 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 99/324 (30%), Gaps = 38/324 (11%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A+ + + + L R A LE + + A R +L Sbjct: 111 AKALPHLARYEQGAGETAVSRELAGLAHAQARSPEEARAALERSIALDAKRVTPRLALAR 170 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKE 220 GDL A +AL ++P+ + + A+ + + Sbjct: 171 LFLYRGDLKRAVATVDEALAVAPEDRLALTLRGDLLLRQGDAPGALVVFRKVASLAPGDD 230 Query: 221 WNRNRAILLIARSLENADKGDMIAS-------------YHDAIESLKLCDNSIMASICAA 267 + R + LL ++ + A + AS A+ + + A+ Sbjct: 231 YARYMSGLLALQTGDEAGAAAVAASMNKDFKDNSLTLMLDGALAAQRKDYTL--AASLFQ 288 Query: 268 K----------------SLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTV 308 + +L + A ++ + P + A + L Sbjct: 289 RSVAMRPSLEGYYKLGMALYGKGDLETALSQFNRVLEATPEYDAARRMTVTILLAQRRVA 348 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367 + A +L E N + +++ + G A + + P LL L+++ Sbjct: 349 EARQEAQKLVERNPSDAAAHFMLASAQMAAGDRAGAERSFEAGLALQPAHVPALLQLSRL 408 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 +QA+ + + ++A+ A PD Sbjct: 409 KQADGRPDEALED-LKAAVVAAPD 431 >gi|302036000|ref|YP_003796322.1| hypothetical protein NIDE0624 [Candidatus Nitrospira defluvii] gi|300604064|emb|CBK40396.1| protein of unknown function, containing TPR repeats [Candidatus Nitrospira defluvii] Length = 399 Score = 64.2 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 13/182 (7%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 AI L + + +L + K + + +SLKL S Sbjct: 92 REGNADGAIEALKKALVQNPKLAEAYHVLGLVY---FQSKRNPDEAIQAYKQSLKLGPAS 148 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314 A ++Q + AE +L + + P H ++A +Y + LK Sbjct: 149 AEILNDLADVYLAQGRGSDAEGVLRQALDIAPGNEEAHLDLARLYEA--RHDRANALKMY 206 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH 373 L + + E+L ++ + G + A + P + + LL ++ A Sbjct: 207 QSLLRVRPDHAEALYHLASLYDSQGDLKLAREYLSRLTQANPGHADAWYLLGRL--AERG 264 Query: 374 NT 375 N Sbjct: 265 ND 266 Score = 36.8 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 6/197 (3%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +A A + + E +L ++ A A + + +L++ Sbjct: 160 LAQGRGSDAEGVLRQALDIAPGNEEA--HLDLARLYEARHDRANALKMYQSLLRVRPDHA 217 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+Y L GDL A+ Y ++ +P ++ + + Sbjct: 218 EALYHLASLYDSQGDLKLAREYLSRLTQANPGHADAW-YLLGRLAERG---NDLNAAAAA 273 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K A + +G + + + +E ++ A + S N Sbjct: 274 FKEAIAVKADLVDAHYNLGFVYRSQGLLAEAEREFLEVIRYRPEYAEAHLNLGMVYTSLN 333 Query: 275 KKRKAEVILEKIWKVNP 291 + +AE E+ + P Sbjct: 334 RLEEAEKEHERAVALKP 350 Score = 36.5 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 85/270 (31%), Gaps = 50/270 (18%) Query: 129 IALAERQYNIAHEKLE-MMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDI 183 E + A E L+ ++Q P E + +YF+S R + A + ++L + Sbjct: 89 TLFREGNADGAIEALKKALVQNPKLAEAYHVLGL--VYFQSKRN--PDEAIQAYKQSLKL 144 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P + + + Y+ S A L Q A + + + D Sbjct: 145 GPASAEILNDLADVYLAQGRGSDAEGVLRQALDIAPGNEE----AHLDLARLYEARHDRA 200 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302 + L++ + A A SQ + A L ++ + NP H + + L Sbjct: 201 NALKMYQSLLRVRPDHAEALYHLASLYDSQGDLKLAREYLSRLTQANPGHADAWYLLGRL 260 Query: 303 -----------------------------------LSENTVGKLKR-ALRLEEINKESVE 326 S+ + + +R L + E E Sbjct: 261 AERGNDLNAAAAAFKEAIAVKADLVDAHYNLGFVYRSQGLLAEAEREFLEVIRYRPEYAE 320 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + + +++A + A+ + P Sbjct: 321 AHLNLGMVYTSLNRLEEAEKEHERAVALKP 350 >gi|88812565|ref|ZP_01127813.1| TPR repeat protein [Nitrococcus mobilis Nb-231] gi|88790159|gb|EAR21278.1| TPR repeat protein [Nitrococcus mobilis Nb-231] Length = 918 Score = 64.2 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 111/318 (34%), Gaps = 13/318 (4%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 + + AL L++ L + + + Q + +L + L +++ + Sbjct: 427 DKKDSRADVALIRTLIA----KRQLDQALPAIDRLQEKLPESAIPEVLRGLVFLLQKKSD 482 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A + ++ + L + + D +A+++ LD P A+ Sbjct: 483 TALQAFTAAVKKDPDSIGGHHGLAVLAIQKRDFAAAKKHYQAILDAHPGNLRTELALSGL 542 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + + A+++L + ++ E AI + E +G + ++L+ Sbjct: 543 ARRSDDRAGALSWLERAAEDNPES----AIAAGLYARELLAQGKTRKALQAIQKALETNP 598 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI----YTHLLSENTVGKLKR 313 + SL+++ + R A +++ +P +A + L++ + Sbjct: 599 EHVGLLYMRGASLLAEGEHRAAADTYQELIAAHPKFMLARLQLARARRQLNDIDGAREAL 658 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 L E++ V + V + + + + +A + P+ + LL + Sbjct: 659 TEAL-ELSPHHVGAKVTLLLLEAQAKNFSRALKLVHEIEQQHPKSPVGQLLEAQVRVLQD 717 Query: 374 NTDKILYWTQSALHAMPD 391 + + SA A P+ Sbjct: 718 KLPQAIDTLLSAAKAHPE 735 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 104/279 (37%), Gaps = 19/279 (6%) Query: 87 ALYTGLMS---IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHE 141 A+ GL + +A A + N V LL ++ A E ++ A + Sbjct: 567 AIAAGLYARELLAQGKTRKALQAIQKA----LETNPEHVGLLYMRGASLLAEGEHRAAAD 622 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + ++ A L ++ D++ A+ T+AL++SP ++ A Sbjct: 623 TYQELIAAHPKFMLARLQLARARRQLNDIDGAREALTEALELSPHHVGAKVTLLLLEAQA 682 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 K +SRA+ +++ ++ + + + + + + + + + K S Sbjct: 683 KNFSRALKLVHEIEQQHPKSPVGQ----LLEAQVRVLQDKLPQAIDTLLSAAKAHPESRA 738 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEI 320 A + K R+A V + W HP ++ +G+ K A + E Sbjct: 739 VMRMLASLQWATGK-REASVTILAAWLKT-HPGDLQMARALGDRYLAMGRNKAAGEIYEK 796 Query: 321 N-KESVESLVIVSKIALE--MGSIDQAHAKAMLAMKIAP 356 ++ ++++ +AL + +QA A A ++ P Sbjct: 797 VIQDHPRDALVLNNLALARWLDDPEQAMKLAREANRLQP 835 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 94/293 (32%), Gaps = 44/293 (15%) Query: 124 LLEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL + A A + A + L + + I + A + GD + + Y +A+ Sbjct: 334 LLALSQAQAGGD-DAAVQTLRELQGVDIEDPKVLAAIG--QAALSAGDSATGRHYFEQAV 390 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKG 240 +PD A+ + + + +AI L+ + + K+ + A++ + D+ Sbjct: 391 ARAPDKAAFRMALASVLLESGDARQAIEELDVASQLDKKDSRADVALIRTLIAKRQLDQA 450 Query: 241 -----------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + ++K +SI A I Sbjct: 451 LPAIDRLQEKLPESAIPEVLRGLVFLLQKKSDTALQAFTAAVKKDPDSIGGHHGLAVLAI 510 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 + A+ + I +P + L+ + + LE +++ ES + Sbjct: 511 QKRDFAAAKKHYQAILDAHPGNLRTELALSGLARRSDDRAGALSWLERAAEDNPESAIAA 570 Query: 332 ---SKIALEMGSIDQAHAKAMLAMKIAP------RKEIFLLLAQIEQANSHNT 375 ++ L G +A A++ P LLA+ E + +T Sbjct: 571 GLYARELLAQGKTRKALQAIQKALETNPEHVGLLYMRGASLLAEGEHRAAADT 623 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 95/272 (34%), Gaps = 14/272 (5%) Query: 98 HNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 I A + + N+ L QI L E Q + A +E + ++ T Sbjct: 200 GRIEAAAQQNKAALDAFDKALELSPNQPGALLGRAQIELIENQLDAAEADIEALRKLAPT 259 Query: 153 REFAVYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + L F R G ++A Y AL +PD + + +AI Sbjct: 260 SVQANHLLGFLRFRQGRFNDAALAY-QDALRANPDFDPAILWLGLTNYAQHNYEQAIQRF 318 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + R + +L ++++ D + ++ + + D ++A+I ++ + Sbjct: 319 SRFLQKYPDSVRVKVLLALSQAQAGGDDAAVQTLRE--LQGVDIEDPKVLAAI--GQAAL 374 Query: 272 SQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 S E+ P +A L S + ++ +++K+ + Sbjct: 375 SAGDSATGRHYFEQAVARAPDKAAFRMALASVLLESGDARQAIEELDVASQLDKKDSRAD 434 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 V + + + +DQA + P I Sbjct: 435 VALIRTLIAKRQLDQALPAIDRLQEKLPESAI 466 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 22/189 (11%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV---------QIAL 131 DK +A+ T L + AH A Q T E V +L Q+A Sbjct: 716 QDKLPQAIDTLLSAAKAHPESRAVMRMLASLQWATGKREASVTILAAWLKTHPGDLQMAR 775 Query: 132 AERQY-------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A A E E ++Q + +L + + D A + A +A + Sbjct: 776 ALGDRYLAMGRNKAAGEIYEKVIQDHPRDALVLNNLAL-ARWLDDPEQAMKLAREANRLQ 834 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIARSLENADK 239 P P + + + V + + + L K+ + ++ A+ R ++ Sbjct: 835 PKNPALQDTLGWMLVEDGQVEQGLPLLESAKERLGDSLTVQYHYAAALARAGRQSAAREE 894 Query: 240 GDMIASYHD 248 + + Sbjct: 895 LKDLLAKDK 903 Score = 39.1 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 65/196 (33%), Gaps = 9/196 (4%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP 150 L+ A N A K+ + QQH + LLE Q+ + + + A + L P Sbjct: 677 LLEAQAKNFSRALKLVHEIEQQH--PKSPVGQLLEAQVRVLQDKLPQAIDTLLSAAKAHP 734 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 +R + L G ++ L P + A+ +Y+ A Sbjct: 735 ESRAV-MRMLASLQWATGKREASVTILAAWLKTHPGDLQMARALGDRYLAMGRNKAAGEI 793 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + ++ + A++L +L D + A E+ +L + L Sbjct: 794 YEKVIQD----HPRDALVLNNLALARWLD-DPEQAMKLAREANRLQPKNPALQDTLGWML 848 Query: 271 ISQNKKRKAEVILEKI 286 + + + +LE Sbjct: 849 VEDGQVEQGLPLLESA 864 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 21/227 (9%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E LN+A AL SPD + + YV + + A L + + Sbjct: 30 IEYRDQDKLNAAVIELKNALQQSPDNAKARLLLGKVYVESGQGRAAEKELRRAISLGVD- 88 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +LE A + Y D +++L+ S A A++LI + +A Sbjct: 89 -------EGEIALELAKAMLIQGRYQDVLDALQPSRQSDPA--RHAEALIVKGDAGQALG 139 Query: 282 ILEKIWKVNPHP----------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +E ++ + +L + R RL + + + +S +++ Sbjct: 140 KIELACADYQQASKLDADNLSADLGLVRCDVLQDRIDQARARVKRLLQQHPKHAQSWIML 199 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDK 377 +I A A++++P + LL AQIE + Sbjct: 200 GRIEAAAQQNKAALDAFDKALELSPNQPGALLGRAQIELIENQLDAA 246 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 78/198 (39%), Gaps = 10/198 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G +A++ +A+ + D + + + ++ + + L +++ Sbjct: 68 ESGQGRAAEKELRRAISLGVDEGEIALELAKAMLIQGRYQDVLDALQPSRQS-DPARHAE 126 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+++ + + G + + D ++ KL +++ A + + + Q++ +A +++ Sbjct: 127 ALIVKGDAGQAL--GKIELACADYQQASKLDADNLSADLGLVRCDVLQDRIDQARARVKR 184 Query: 286 IWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGS 340 + HP+ A + L + L + E++ +L+ ++I L Sbjct: 185 --LLQQHPKHAQSWIMLGRIEAAAQQNKAALDAFDKALELSPNQPGALLGRAQIELIENQ 242 Query: 341 IDQAHAKAMLAMKIAPRK 358 +D A A K+AP Sbjct: 243 LDAAEADIEALRKLAPTS 260 >gi|153839872|ref|ZP_01992539.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus AQ3810] gi|149746605|gb|EDM57593.1| tetratricopeptide repeat family protein [Vibrio parahaemolyticus AQ3810] Length = 391 Score = 64.2 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 110/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E +++ P Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y E+ + +V Y +EW +AI + NQ Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIHYANQLA 168 Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + +R R A ++ + G+ + ++L + ASI + + Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRASISLGRIYLE 228 Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ +LE K + + P IA Y HL E+ + + RA +++ S E Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 ++++++ S+ A + P + F L I +A + Sbjct: 288 --LMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|254412148|ref|ZP_05025923.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196181114|gb|EDX76103.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 427 Score = 64.2 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 106/299 (35%), Gaps = 17/299 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+M + A Q+ F + L + Q A E+ +M + + Sbjct: 57 QGVMRYNRSDFKAAELAFRKALQEDPFI--PMARYLLGNALFQQGQIAAAAEQYQMAIGL 114 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAI 208 A Y+L + G++ A +A+ I P+ + + A + A+ Sbjct: 115 DPNMAEAHYNLGLMLYQQGNIEEAISAYQQAIAIDPNLA-AARYNLGLALEAVGDTEAAL 173 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + Q + A+ +L A + + ++ ++L+ + A Sbjct: 174 SEYTQAVRLNPNS----AVAKYNLALLLAKQNQVDSAIAALRQALRNDSQFVQAHYQLGL 229 Query: 269 SLISQNKKRKAEVILEKIWKVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 L QN+ +A+ + ++N H + I+ L + ++R + +I+ + Sbjct: 230 LLAQQNQITEAKNSFLRATQINSRFAPAHYRLGLIF--LQQGDAEEAIRRFNWVTQIDPD 287 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTDKILY 380 +V++ + ++ G +QA A A+ + P + + L + + + Y Sbjct: 288 NVDAYRQLGAALIQNGEYEQAIAALERAISLDPYDSLAHYNLAVALHRNQQYEDAISEY 346 >gi|120554540|ref|YP_958891.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8] gi|120324389|gb|ABM18704.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8] Length = 900 Score = 64.2 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 30/322 (9%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYL----------------LEVQIALAERQYNI 138 + A + + H E L L L+ + L ++ Sbjct: 105 LGQSERNQAALIRAEARILQGKHQEALESLDQISSPSPDQQLQADNLKGRAWLTSGDFDK 164 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A E + + A+ L + GD ++A+ KA++I + V Q Sbjct: 165 AEEAYQSAFDKHSNNVVAMVGLSRVATAKGDFDTAKERLEKAIEIDAEHEDVWLWRAQFA 224 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++W+ A + + +++ + + A ++G ++ K Sbjct: 225 HAQQQWAEAEQAYIRALETIGQFDVMTFRKYQTISALITVLREQGKSAEAFVYEEILAKS 284 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI-----YTHLLSENTVG 309 +I +++ AA S + A L+++ P H + A + Y E Sbjct: 285 GPGTIKSNLEAAASAYNDGDLNTAARYLQEVLNQVPNHQQSALMLGVIRYRQGRPEEAE- 343 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 K L ++ + + E +++ + M A + + L+ I Sbjct: 344 --KLLAPLADM-ENADEVRKLLAATRISMRDPAGAKSLLEDLEGSDADPQTLALVG-IAS 399 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 S + + +L PD Sbjct: 400 LASGDDQSGRQLLEKSLELAPD 421 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 51/255 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 N AR Q H + Y +E + ++ A E ++ L T E Sbjct: 680 GNATAARSALQDAKQHH--PDSPAPYQVEASYYENQGEHQQAAELYQLALAKRQTAEL-- 735 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 A +A A +I L + K Sbjct: 736 ---------------AIAHAR------------------ALSNAGRSQNSIEALQEANKQ 762 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 N + +L+ +L+ G A+ + L+L ++ +A A Sbjct: 763 FP----NNSSILLTLALQTQQAGQTDAAIEHYQQVLQLTPDNALALNNLAWLYYEAGN-S 817 Query: 278 KAEVILEKIWKVNP-HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331 +A + ++ +++ P + IA+ Y + E ++ L+RA L +S E + + Sbjct: 818 EAASLAKRAYELVPENAAIADTYGWILFEAGEHEQSLAVLERAHSLA---PDSQEIAMHL 874 Query: 332 SKIALEMGSIDQAHA 346 ++ G D A Sbjct: 875 AEAYRATGRTDAAQQ 889 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 92/252 (36%), Gaps = 17/252 (6%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL G++ A K+ + ++ V L ++ R A LE + Sbjct: 326 ALMLGVIRYRQGRPEEAEKLLAPLADMENADE---VRKLLAATRISMRDPAGAKSLLEDL 382 Query: 147 L---QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 P T A+ + + GD S ++ K+L+++PD + ++ Sbjct: 383 EGSDADPQT--LALVGIASLA--SGDDQSGRQLLEKSLELAPDNHNLRLRYAAYLTQTRD 438 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 ++ AI ++ + +A +L +++ G+ + LK +S+ A Sbjct: 439 FANAIK--QARQIPSDATEALQATILTSQAQAL--SGNSQTATDTLDTWLKANPDSMAAL 494 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEI 320 I S N ++A E+ K +P P +A +NT + + E Sbjct: 495 IARGNLASSLNNTQQAASYFERAHKQHPEEAAPLVALGNLAREQQNTEQAIAWYRQAVET 554 Query: 321 NKESVESLVIVS 332 N ++ ++ ++ Sbjct: 555 NPNNLPAIQALA 566 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 91/298 (30%), Gaps = 23/298 (7%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV--------QIALAERQYNIAHEKLEM 145 ++ ++ A ++ + + ++ L Q+A E Sbjct: 599 ALINNDTLQADELTARLMEREREDQPSPAEPLVAAVYEGIATQMAQRENSERALEILSRG 658 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 P A+ E G+ +A+ A PD+P + Y E Sbjct: 659 RTLFPENEAIALKVAAIEF-SNGNATAARSALQDAKQHHPDSPAPYQVEASYYENQGEHQ 717 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 +A R A L IA + ++ G S E+ K N+ + Sbjct: 718 QAAELYQLAL-----AKRQTAELAIAHARALSNAGRSQNSIEALQEANKQFPNNSSILLT 772 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTHLLSENTVGKLKRALRLEEI 320 A + A +++ ++ P +A +Y + KRA L Sbjct: 773 LALQTQQAGQTDAAIEHYQQVLQLTPDNALALNNLAWLYYEAGNSEAASLAKRAYELV-- 830 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 E+ I E G +Q+ A A +AP +EI + LA+ +A Sbjct: 831 -PENAAIADTYGWILFEAGEHEQSLAVLERAHSLAPDSQEIAMHLAEAYRATGRTDAA 887 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 23/305 (7%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 + G ++ + +N A +QH LV L +A ++ A + Sbjct: 495 IARGNLASSLNNTQQAASYFERAHKQHPEEAAPLVAL--GNLAREQQNTEQAIAWYRQAV 552 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT--------EAVVQQYV 199 + A+ +L R + +IS P A++ Sbjct: 553 ETNPNNLPAIQALAGVMKRD-------QLTGLMQEISSKHPEANGPRLILLESALINNDT 605 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 L + A +++ A + + + A + + + L + Sbjct: 606 LQADELTARLMEREREDQPSPAEPLVAAVYEGIATQMAQRENSERALEILSRGRTLFPEN 665 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRAL 315 ++ A S A L+ HP+ Y ++ ++ + Sbjct: 666 EAIALKVAAIEFSNGNATAARSALQDA--KQHHPDSPAPYQVEASYYENQGEHQQAAELY 723 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 +L +++ E + ++ G + A K P LL ++ + T Sbjct: 724 QLALAKRQTAELAIAHARALSNAGRSQNSIEALQEANKQFPNNSSILLTLALQTQQAGQT 783 Query: 376 DKILY 380 D + Sbjct: 784 DAAIE 788 >gi|254429756|ref|ZP_05043463.1| HemY N-terminal domain protein [Alcanivorax sp. DG881] gi|196195925|gb|EDX90884.1| HemY N-terminal domain protein [Alcanivorax sp. DG881] Length = 410 Score = 64.2 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 49/392 (12%), Positives = 115/392 (29%), Gaps = 29/392 (7%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 L+ +++ + ++ V I + T+ ++ + A ++L + Sbjct: 6 LLIIIALVAALALG-RWMAADSGYVLIIRDSVSVDTTLGFVVLMALLGAVALVVLTLLGN 64 Query: 64 FFLSC--PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121 + P K ++ L +G + + A ++ + + Sbjct: 65 AAWNAMEPVRATRRWKKAVAERR---LRSGFLQLVDGEQEKAERLLVAAGED--GDWPLV 119 Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYATK 179 +LL + A + + + LE R A L + G A+ Sbjct: 120 AWLLAAEAAQEQDKVEASQHYLEQASTDRRGRLVA--GLMKARFALDDGYPEQARSELKV 177 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIARSLEN 236 D++P + + K+W L + A + R R L Sbjct: 178 LADMAPRNKRILNTYAEVLESQKDWQALCALMPRLKRAFGEANQARRERRAWLAWLQETA 237 Query: 237 ADKG--DMIASYHDAIESLKLCDNSI---MASICA-AKSLISQNKKRKAEVILEK----I 286 G D + + + K + A + A L R A ++ + Sbjct: 238 RKPGFNDADSRRDELRKLWKDVPVHLKNDPAMVARYAGFLAQLGGGRGALNLVREQLGNQ 297 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 W P + + ++ + L + + L+ ++AL+ +A Sbjct: 298 WDDRLPPVL-EAIDDIPPDDLLQVL---EKWLVERPGNASVLITAGRVALKARLWGKAQG 353 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 A + LA++ +A ++ + Sbjct: 354 FFEAAANSSQSATALAELARLYRALGDSSKAM 385 >gi|83594187|ref|YP_427939.1| hypothetical protein Rru_A2855 [Rhodospirillum rubrum ATCC 11170] gi|83577101|gb|ABC23652.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 937 Score = 64.2 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 77/268 (28%), Gaps = 14/268 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMML 147 G+ A AR+ + L LE++ A + A E + Sbjct: 188 RGVALAALGEGEAAREAFKNAILRDGAAPMAWTNLGNLEIRAARSADALERAVEAYGQAI 247 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + A +L +G + A +A +A + P V + A Sbjct: 248 RRAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPHDVTVLNTQANILRGLRRVDEA 307 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + L + + A L D + ++ L + + + A Sbjct: 308 VAILERALA----CDGRSAETHSNLGLALLAAQDRQRAEEHFRKAAALAPDCVDIIVNLA 363 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKLKR-ALRLEEINKES 324 LI N ++ +LE P +A + H EN + + Sbjct: 364 CFLIHINAGKEVLGVLEPALARFPGDVGLLATLGLHYFQENAYEDCATVFETVLAKKPDH 423 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAM 352 VE ++ +L + Q LA+ Sbjct: 424 VE-----ARASLGVVRWSQGRLVESLAL 446 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 90/312 (28%), Gaps = 52/312 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNE-------YLVYLLEVQ--------IALAERQ 135 GL +A A + + LV +L+ Q + Sbjct: 50 GLTRVALGRPLEAEQPLRRALALDPIDDPFHARAVCALVDVLKAQGRMAEVSEVLERAGD 109 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIG------DLNSAQRYATKALDISPDAPW 189 + ML R + R D + + A L +P Sbjct: 110 VAPMNAVFPRMLGAHY-RALGQVGAAITAARRAVAVESADGENWRGLAATLLGGAPG--E 166 Query: 190 VTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWN--------RNRAILLIARSLENAD 238 EA+ + +W + R+ A + +L N + Sbjct: 167 ALEALERAKTCGDDGADWWNIRGVALAALGEGEAAREAFKNAILRDGAAPMAWTNLGNLE 226 Query: 239 --KGDMIASYHDAIES----LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + A+E+ ++ +S A A++L ++ +A V E+ + PH Sbjct: 227 IRAARSADALERAVEAYGQAIRRAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPH 286 Query: 293 PEI------ANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 ++ ANI L + V L+RA + S E+ + L +A Sbjct: 287 -DVTVLNTQANILRGLRRVDEAVAILERA---LACDGRSAETHSNLGLALLAAQDRQRAE 342 Query: 346 AKAMLAMKIAPR 357 A +AP Sbjct: 343 EHFRKAAALAPD 354 >gi|328474640|gb|EGF45445.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus 10329] Length = 391 Score = 64.2 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 109/343 (31%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E +++ P Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y E+ + +V Y +EW AI + NQ Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWENAIHYANQLA 168 Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + +R R A ++ + G+ + ++L + ASI + + Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNTNKAIQHFKKALSEDPKCVRASISLGRIYLE 228 Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ +LE K + + P IA Y HL E+ + + RA +++ S E Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 ++++++ S+ A + P + F L I +A + Sbjct: 288 --LMLAQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|167580199|ref|ZP_02373073.1| HemY protein N-terminus family [Burkholderia thailandensis TXDOH] Length = 396 Score = 64.2 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 124/398 (31%), Gaps = 22/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + A L Sbjct: 3 LRGIIWLAVLFAIAAALATVGRFDAGQVLIVYPPYRIDVSLNFFVLAIIVAFIALYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + ++ + +L L ++ A A K Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAHASLRDALANLYAGRFSRAEKAARDALAVDANQAAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSAQRYAT 178 + A A + + + + + ++ L R D A Sbjct: 123 SLI-----AAAATHRMHEYARRDDWLAKVNGQEWQDARLLATADMRADGRDAEGALAALA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA- 237 + + ++ K WS + + + + + A+ L ++ E+ Sbjct: 178 EMQASGGKRIHAQQIALRAQQQNKNWSEVLKI-AKALEKREALHPAAAVRLRQQAAEHLL 236 Query: 238 -----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++ + + + + AA+ LI+ ++++A I+E N + Sbjct: 237 RDRRHDADALLEVWQTLSATERQSPRL---ADLAAELLIALERRQEARRIVEDALAHNWN 293 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A + + L + ++ + +A + A+ Sbjct: 294 ARLLRRYPDTAGADALPLIQKAEGWRRERPDDADLLFALGRLCQQQQLWGKAQSFLESAL 353 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + ++ +SAL Sbjct: 354 KLADDEPLKIRAHRALARLFEHLGETDKAAQHYRESAL 391 >gi|315186031|gb|EFU19794.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 649 Score = 64.2 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 81/252 (32%), Gaps = 16/252 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + + L + Y+L A YA KA+D++P Sbjct: 406 TYYLAGRLQDAEKAFKEALSTEKGSDDPVSAYNLALVLIEEDKAQEALSYAQKAVDLAPR 465 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + ++ A T + + ++ + R L L + DKG+ + Sbjct: 466 VPEYQYTLGLAAYKLGAYTVAETAFGKAIELKPDYVKPRVQL----GLLHQDKGEDDKAL 521 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTH 301 +E+ KL S + + ++ + +P +A Y Sbjct: 522 SLLLEAYKLEPTSFEVNNNLGNLYARKKLYSESIKHYRAAIEADPKDTLVRYNLALSYLD 581 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + ++ L +I+ ++ + K+ + + + A ++ P + Sbjct: 582 AKEYDEAVRV--FQELLKIDPSYWDAYYQLGKLLITLEDSEGAKKVLSTLLEKKPD---Y 636 Query: 362 LLLAQIEQANSH 373 A++E+ S Sbjct: 637 SRRAEVEKLLSG 648 >gi|288818802|ref|YP_003433150.1| tetratricopeptide repeat family protein [Hydrogenobacter thermophilus TK-6] gi|288788202|dbj|BAI69949.1| tetratricopeptide repeat family protein [Hydrogenobacter thermophilus TK-6] gi|308752388|gb|ADO45871.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobacter thermophilus TK-6] Length = 545 Score = 64.2 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 90/285 (31%), Gaps = 9/285 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 + + + + L L + A +E + + Y Sbjct: 99 GQKDKALSALEEGYRLLPKSKEIMLFLADEYLRSGENKKAKAVIENLAKESPDNPLPYYM 158 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G+ A Y K+L I + Y + E+++A K + Sbjct: 159 LARIYLSEGNKELAIHYLEKSLQIKSSFEAGFITLGSIYEESGEYTKAEQLYKDVLKTSP 218 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + L + + + +L + A LI +K KA Sbjct: 219 DNK----VALERLANLYVLTNRLEEAQDIYERLARLYPE-ENYAYQYALVLIRSSKYDKA 273 Query: 280 EVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVESLVIVSKIAL 336 E IL +++ P + E+A Y +L L R RL + + + + + ++ I + Sbjct: 274 EKILSELYSKYPDNLEVAYTYGLVLEMEKKTDLARQVYERLYKKDPTNTKVIERLAGIYI 333 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILY 380 + +AH + + P+ LL+ + + + Y Sbjct: 334 DAKDYQKAHEILKKGLSLDPKSYQLNLLMGSLLNEEGKSEQALSY 378 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 96/299 (32%), Gaps = 32/299 (10%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFA 156 LA++M +H + E YL + Q + A E ++ + F Sbjct: 72 ELAKRM------KHLYPKEQASYLTLHSVYSLMGQKDKALSALEEGYRLLPKSKEIMLF- 124 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L E R G+ A+ SPD P + + Y+ AI +L + + Sbjct: 125 ---LADEYLRSGENKKAKAVIENLAKESPDNPLPYYMLARIYLSEGNKELAIHYLEKSLQ 181 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A + S+ + G+ + + LK ++ +A A + N+ Sbjct: 182 IKSSFE---AGFITLGSI-YEESGEYTKAEQLYKDVLKTSPDNKVALERLANLYVLTNRL 237 Query: 277 RKAEVILEKIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +A+ I E++ ++ P A Y + S K L +++E + Sbjct: 238 EEAQDIYERLARLYPEENYAYQYALVLIRSSKYDKAEKILSELYSKYPDNLEVAYTYG-L 296 Query: 335 ALEMG-SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS-----HNTDKILYWTQSALH 387 LEM D A K P IE+ + K + L Sbjct: 297 VLEMEKKTDLARQVYERLYKKDPTNTKV-----IERLAGIYIDAKDYQKAHEILKKGLS 350 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 22/228 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + + A+ Y +AL+ P + + ++ + KE L K+ + + Sbjct: 30 QQENPKKAETYCIRALERLPTPTLFVDTIRLELLLKRKE-----KALELAKRMKHLYPKE 84 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A L S+ + G + E +L S + A + + +KA+ ++E Sbjct: 85 QASYLTLHSVYSL-MGQKDKALSALEEGYRLLPKSKEIMLFLADEYLRSGENKKAKAVIE 143 Query: 285 ---KIWKVNPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K NP P +A IY L N + + +I + + I E G Sbjct: 144 NLAKESPDNPLPYYMLARIY--LSEGNKELAIHYLEKSLQIKSSFEAGFITLGSIYEESG 201 Query: 340 SIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQANSHNTDKIL 379 +A +K +P +++L ++E+A Sbjct: 202 EYTKAEQLYKDVLKTSPDNKVALERLANLYVLTNRLEEAQDIYERLAR 249 >gi|295675860|ref|YP_003604384.1| HemY domain protein [Burkholderia sp. CCGE1002] gi|295435703|gb|ADG14873.1| HemY domain protein [Burkholderia sp. CCGE1002] Length = 396 Score = 63.8 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 50/407 (12%), Positives = 122/407 (29%), Gaps = 45/407 (11%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSR 63 L+ + ++ + + V + + S + + L L + R Sbjct: 6 LLWLAALFAVAVMLAVGGRFDAGQVLLIYPPYRVDMSLNLFIVGLVVLFILLYALLRIIR 65 Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV------------- 110 P + + K + AL + ++ A A K Sbjct: 66 NIWRMPQRVAAYRARARVAKAHAALRDAIGNLYAGRFSRAEKAAKDALTNGDNKGAAGLI 125 Query: 111 --SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 + H H QI AE + A ++ R Sbjct: 126 AATAAHRMHEYGRRDEWLAQIDEAE--WQDAR-----LMATADMRADGR----------- 167 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRN 224 D + A T+ + +++ K W + + ++ + R Sbjct: 168 DADGALHALTEMQSQGARRIHAQQIMLRAQQQLKNWGEVLKLVKTLEKREAIHPAVAVRL 227 Query: 225 RAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICAAKSLISQNKKRKAEVIL 283 R + + D + ++ + + + AA+ L++ N+ ++A I+ Sbjct: 228 RQLAAENLLRDRRHNADALLELWSSLSATERHSPRL---ADTAAELLVALNRPQEARKIV 284 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 E+ N + Y + + + +++A + E + + + ++ L + Sbjct: 285 EEALAQNWDARLLRRYPDTAAGDALPLIQKAEAWLKDRPEDADLMFALGRLCLHQQLWGK 344 Query: 344 AHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 A + A+K+A + LA++ + ++ +SAL Sbjct: 345 AQSFLERALKLADNETLKIRSHRALARLHEQLGDTDKASQHYRESAL 391 >gi|223940440|ref|ZP_03632292.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223890885|gb|EEF57394.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 803 Score = 63.8 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 106/348 (30%), Gaps = 32/348 (9%) Query: 28 VSITWGNRLYRTSP----FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 + +TWG S +I S L + +L A LF D Sbjct: 374 IVVTWGICEMAASLKLPNSLISSAAVLILISCGVLTASQLQIWQNSVTLFKHTLDVTRD- 432 Query: 84 GYKALYTGLMSIAAHNIPLARKMHSY-VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 + + A H + + + + NE L + + Y A E Sbjct: 433 --NVIARENLGFAYHELKQYDEAFNEFSAALKINPNEPHALLGMGMLCSDKGDYQKAIEY 490 Query: 143 LEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE----A 193 L+ TR +L+ + +A +Y +AL + PD Sbjct: 491 FNAALKNKIPRYAVTRLLLGNALFDQGKL---PEAADQY-REALRVEPDLLDANHRLGLV 546 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + AI++ N + + + R +L G++ A+ +L Sbjct: 547 LFKLNLTR----EAISYFNAELRVESDLPDTRYLLGECYKKL----GNLTAAIAHYQSAL 598 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGK 310 ++ + I A L Q +A+ ++I ++ P E+A+ Sbjct: 599 EITPDFIPARQQLGILLAQQGNTSEAQRHFQRIVELQPTNELAHFSLAATLELQGKLDEA 658 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + E+L ++ I + A A K+ P Sbjct: 659 AAHFSQAVRLAPTDYEALRRLAGIFVRQRQFGPAIQNLRYAEKLQPDS 706 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 21/233 (9%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + A + AL I+P+ P A++ ++ +AI + N KN A Sbjct: 450 YDEAFNEFSAALKINPNEP---HALLGMGMLCSDKGDYQKAIEYFNAALKNKIP---RYA 503 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + D+G + + E+L++ + + A+ L N R+A Sbjct: 504 VTRLLLGNALFDQGKLPEAADQYREALRVEPDLLDANHRLGLVLFKLNLTREAISYFNAE 563 Query: 287 WKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +V P+ + Y L + + EI + + + + + + G+ Sbjct: 564 LRVESDLPDTRYLLGECYKKLGNLTAA--IAHYQSALEITPDFIPARQQLGILLAQQGNT 621 Query: 342 DQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTDKILYWTQSALH-AMPD 391 +A +++ P E+ F L A +E + A+ A D Sbjct: 622 SEAQRHFQRIVELQPTNELAHFSLAATLELQGKLDEAAAH--FSQAVRLAPTD 672 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 69/182 (37%), Gaps = 10/182 (5%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 +L Q + + A + ++++ T E A +SL G L+ A + ++A+ + Sbjct: 613 ILLAQ----QGNTSEAQRHFQRIVELQPTNELAHFSLAATLELQGKLDEAAAHFSQAVRL 668 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-ENADKGDM 242 +P + +V +++ AI L +K + + A L + + + Sbjct: 669 APTDYEALRRLAGIFVRQRQFGPAIQNLRYAEKLQPDSPKILANLASLLASCPQPELRNG 728 Query: 243 IASYHDAIESLKLCD---NSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + A ++ +L D + A A+ + + A+ + E+ N +A+ Sbjct: 729 PEALQLAQKAYELSDKSLTFLSILDVAYARIGQFDDAIKTAQKVQEQA-VANNQRSLADA 787 Query: 299 YT 300 Sbjct: 788 AA 789 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 54/195 (27%), Gaps = 43/195 (22%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G++ N A++ + + + L + + + + A +++ Sbjct: 612 GILLAQQGNTSEAQRHFQRIVELQPTN--ELAHFSLAATLELQGKLDEAAAHFSQAVRLA 669 Query: 151 ATREFAVYSL------------------YFESCRIGDLN--------------------- 171 T A+ L Y E + Sbjct: 670 PTDYEALRRLAGIFVRQRQFGPAIQNLRYAEKLQPDSPKILANLASLLASCPQPELRNGP 729 Query: 172 SAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A + A KA ++S + +++ Y ++ AI + ++ A N+ Sbjct: 730 EALQLAQKAYELSDKSL-TFLSILDVAYARIGQFDDAIKTAQKVQEQAVANNQRSLADAA 788 Query: 231 ARSLENADKGDMIAS 245 A+ LE G Sbjct: 789 AQRLELYRAGKAYEQ 803 >gi|320159497|ref|YP_004172721.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1] gi|319993350|dbj|BAJ62121.1| hypothetical protein ANT_00870 [Anaerolinea thermophila UNI-1] Length = 409 Score = 63.8 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 83/256 (32%), Gaps = 25/256 (9%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA--------TREFAVYSLYFESCRIG 168 +L E + AE ++ A + + P R A+Y Y E+ + Sbjct: 55 RSPESFLQEARAFAAEGRFTQAEAAYQQALQADPKNITIYLELARLQALYGKYAEAQKN- 113 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A A+ ++P++ L E+ A LN+ + A L Sbjct: 114 --------AENAILLNPNSSLAHAIHGWALGLQGEYLPAQAELNKAIEIEPGNGLAYAYL 165 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAEVILEKI 286 +L+ + D + AIE+ + + A+ + + A+ ++ Sbjct: 166 AEVLALQKIEGKDDPTTLEKAIEASRKAVELAPDQMESYRARGYVLEITSNYADAVVAFQ 225 Query: 287 WKVNPHPEIANIYTHL-LSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSI 341 + + +A+++ L + ++ + + + V + L G Sbjct: 226 QAIALNDNLADLHLALGRNYKAQDIYDKAIEEFNKAIALRPDDPRPYVETALTYLRYGEY 285 Query: 342 DQAHAKAMLAMKIAPR 357 +A A A++ P Sbjct: 286 AKAAQYAEQAIQQDPT 301 >gi|238751920|ref|ZP_04613406.1| hypothetical protein yrohd0001_32510 [Yersinia rohdei ATCC 43380] gi|238709900|gb|EEQ02132.1| hypothetical protein yrohd0001_32510 [Yersinia rohdei ATCC 43380] Length = 389 Score = 63.8 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 85/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W+ AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLIIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMSSDDLDKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAASADKQCARVSIMQGRLYLAKGEYAKGVDALERVLQQDKEVVSEALPLLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802] gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802] Length = 810 Score = 63.8 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 13/234 (5%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A + +Q+ A L G + A KA+ ++P+ Sbjct: 276 ALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFA 335 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + + N A + +L ++G + Sbjct: 336 LAYNGLGNALSDQGKRDEAIAAYQKAIQ--LDPNDANAYNNLGLAL--RNQGKRDEAITA 391 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ++++L N +A +L SQ K+ +A +K ++N P A Y +L Sbjct: 392 YQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLN--PNFALAYNNL-GNALS 448 Query: 309 GKLKRALRLEE------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + KR + +N + + + G +++A A A+++ P Sbjct: 449 DQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNP 502 Score = 60.3 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 11/233 (4%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A + +Q+ A +L + G L A KA+ ++P+ Sbjct: 208 ALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLA 267 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + + A+ +D+G + Sbjct: 268 EAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNF----ALAYNGLGNALSDQGKRDEAIAA 323 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303 ++++L N +A +L Q K+ +A +K +++ P AN Y +L Sbjct: 324 YQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLD--PNDANAYNNLGLALRN 381 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + ++N + + G ++A A A+++ P Sbjct: 382 QGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNP 434 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 84/241 (34%), Gaps = 19/241 (7%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A + +Q+ A +L G + A KA+ ++P+ Sbjct: 344 ALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFA 403 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + + A+ +D+G + Sbjct: 404 LAYNNLGNALYSQGKREEAIAAYQKAIQLNPNF----ALAYNNLGNALSDQGKRDEAIAA 459 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---- 304 ++++L N +A +L Q K +A +K ++N P A Y +L + Sbjct: 460 YQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLN--PNFALAYNNLGNALKD 517 Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALEM-----GSIDQAHAKAMLAMKIA 355 + ++AL L E + + ++ L + G +++A + A+KI Sbjct: 518 QGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPEGKLEEALREYEAALKID 577 Query: 356 P 356 P Sbjct: 578 P 578 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 84/236 (35%), Gaps = 11/236 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A +Y A ++++ A +L G L+ A KA+ ++P Sbjct: 35 QGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNP 94 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + AI + + + +A + +L D+G + + Sbjct: 95 NDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNF--AQAYNNLGNALS--DQGKLEEA 150 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--- 302 ++++L N A +L Q K +A +K ++N P A+ Y +L Sbjct: 151 IAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLN--PNYADAYYNLGVA 208 Query: 303 --LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + +++ + + + G +++A A A+++ P Sbjct: 209 LFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 4/135 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A + +Q+ A +L G LN A KA+ ++P+ Sbjct: 446 ALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFA 505 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIA 244 + + + AI + + + L +G + Sbjct: 506 LAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPEGKLEE 565 Query: 245 SYHDAIESLKLCDNS 259 + + +LK+ Sbjct: 566 ALREYEAALKIDPKF 580 >gi|67459221|ref|YP_246845.1| hypothetical protein RF_0829 [Rickettsia felis URRWXCal2] gi|67004754|gb|AAY61680.1| unknown [Rickettsia felis URRWXCal2] Length = 334 Score = 63.8 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 119/349 (34%), Gaps = 28/349 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ F ++ + V I+ + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGFTLIESFDSKVFISLYDYNIETTLFFSLILGLLLLISCFIVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116 + P+ + ++ +KR + L +++ A ++ A +S + Sbjct: 61 FLILIIDLPSKIHNIFNKRKVNHDRYTL---ILAFAEYIMSNKAKSASIARKNLSSEDLK 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ L+ + + ++ + +L A+ Y Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSLYEKAENY 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235 ATKA + + +++ Y W++ I N+ K + E A + + + Sbjct: 175 ATKAYNFNELDSDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234 Query: 236 NADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWKV 289 + + + AI+ D + + + N K K IL+ +++ Sbjct: 235 EVESNNTANAIDYLETAIDLNFYNDELL-------EFYFNLNDKLNVNKKTKILKDAFRI 287 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALE 337 P ++ ++ S + L +++ + E L++ + LE Sbjct: 288 IPSLKLVQLFKKFTSLSDRQI---YEELTQQLDAKKDEILILAIEAYLE 333 >gi|262393796|ref|YP_003285650.1| putative heat shock protein [Vibrio sp. Ex25] gi|262337390|gb|ACY51185.1| putative heat shock protein [Vibrio sp. Ex25] Length = 373 Score = 63.8 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 110/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E +++ P Sbjct: 65 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 120 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y E+ + +V Y +EW +AI + NQ Sbjct: 121 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIYYANQLA 150 Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + +R RA + ++ + G+ + ++L + ASI + + Sbjct: 151 KLGNKRSRMRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLE 210 Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +LE K + + P IA Y HL E+ + + RA +++ S E Sbjct: 211 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 269 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 ++++++ ++ A + P + F L I +A + Sbjct: 270 --LMLAQLVAHHENVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 323 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 324 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 364 >gi|322833306|ref|YP_004213333.1| tetratricopeptide repeat protein [Rahnella sp. Y9602] gi|321168507|gb|ADW74206.1| tetratricopeptide repeat protein [Rahnella sp. Y9602] Length = 389 Score = 63.8 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 91/256 (35%), Gaps = 25/256 (9%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ + + + Sbjct: 83 GEVDRAIRIHQSLMESASLTFEQRLLAVQQLGRDYMAAGFYDRAEDMFNQLVKEQDFQLF 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSLENADKGDMIAS 245 E ++ + +W AI + K KE R L +++ + D Sbjct: 143 ALEQLLIIHQATSDWQNAIDVAERLVKLGKENRRKEIAHFWCELALQAMVSEDFDKATGL 202 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILE--KIWKVNPHPEIANIY 299 A + KLC SI + L++Q RKA +LE K P + Y Sbjct: 203 LKKAAAADKLCAR---VSIMQGRILLAQGDYRKATEALQRVLEQDKELVSEALPMLQECY 259 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 +L ++T+ + R + N + + +++++I + + A ++ P Sbjct: 260 QNL--DDTLAWAEFLRRCVDENTGAT-AELMLAEIIQDEEGRETAQNYINRQLQRHPTMR 316 Query: 360 IF-LLL----AQIEQA 370 +F L+ A E+ Sbjct: 317 VFHHLMDYHLADAEEG 332 >gi|292493243|ref|YP_003528682.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus Nc4] gi|291581838|gb|ADE16295.1| PEP-CTERM system TPR-repeat lipoprotein [Nitrosococcus halophilus Nc4] Length = 930 Score = 63.8 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 30/243 (12%), Positives = 83/243 (34%), Gaps = 41/243 (16%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L L + L + + A E L+I A ++L + + GD+ A+ + Sbjct: 473 PQSPLPLNLIGGVYLGKGEETKAQEAFHEALEIAPGNPSATHNLAALALKKGDIEKARSF 532 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + L P +++ A+ Sbjct: 533 YQETLKHHPGHL---RTLLKL--------GALET-------------------------- 555 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 +G + + +++ ++ I A+ + + K ++ ++ ++ + P HP + Sbjct: 556 -QQGHVEKAKTWVEQAMGKNPKALAPRILLARYYLDKGKPTRSLALIREVQALYPNHPSL 614 Query: 296 ANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + L + ++ +L E +S ++ +++K ++D+ + A++ Sbjct: 615 LAVMGTAQLATNQPTNGIETLQKLVEAQPQSAQAHYLLAKAYSATNNVDKLRGELNQALE 674 Query: 354 IAP 356 + P Sbjct: 675 LDP 677 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 22/273 (8%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLE-MMLQI 149 +++ +I AR + + H H L+ L LE Q + A +E M + Sbjct: 519 LALKKGDIEKARSFYQETLKHHPGHLRTLLKLGALETQ----QGHVEKAKTWVEQAMGKN 574 Query: 150 PATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P + A L G + + + P+ P + + + + + I Sbjct: 575 P--KALAPRILLARYYLDKGKPTRSLALIREVQALYPNHPSLLAVMGTAQLATNQPTNGI 632 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + E A + + ++ + ++L+L N ++ I Sbjct: 633 ETLQK----LVEAQPQSAQAHYLLAKAYSATNNVDKLRGELNQALELDPNHALSKIAMTH 688 Query: 269 SLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ +NK +A + L++ + +P + + + E K S Sbjct: 689 LLMHENKPNEANKLFQELKQAYPEHPEVLAQEGWLAMRQNQPQKAVAAFK---EALKHSP 745 Query: 326 ESLVIV--SKIALEMGSIDQAHAKAMLAMKIAP 356 S +IV + + G+ D++ A +K P Sbjct: 746 TSQIIVNLALAQFQAGNQDRSLATLEDWLKKHP 778 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 7/127 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER---QYNIAHEKLEMMLQIPATRE 154 N P A K + L ++AL + A + + Sbjct: 81 GNGPAAEKELKQALRLGLAPETAATSL--ARVALMQGKFQDVTDASTNYPGLSENERAEL 138 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+ + A++ AL + P+ + K + +A +L++ Sbjct: 139 LALQGHAYLGLHE--FEKAEKLYDSALSLQPNVAEANLGKAEIAAAQKRFDKAREWLDKI 196 Query: 215 KKNAKEW 221 + + + Sbjct: 197 LQTSPAF 203 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 39/188 (20%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I+R+ E DKG++ A+ + +L+ ++ A A+ + AE L++ + Sbjct: 36 HISRAKEYQDKGEIRAAIIELKNALQKTPDNQEARWLLAQVYVKVGNGPAAEKELKQALR 95 Query: 289 VNPHPEIANI---------------------YTHLLSENTVGKLK-------------RA 314 + PE A Y L L +A Sbjct: 96 LGLAPETAATSLARVALMQGKFQDVTDASTNYPGLSENERAELLALQGHAYLGLHEFEKA 155 Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQ 369 +L + E+ + ++IA D+A ++ +P + LL +E+ Sbjct: 156 EKLYDSALSLQPNVAEANLGKAEIAAAQKRFDKAREWLDKILQTSPAFAPAWSLLGDLER 215 Query: 370 ANSHNTDK 377 + Sbjct: 216 YQGNAEAA 223 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 66/216 (30%), Gaps = 44/216 (20%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFE---SCRIGD 169 H + +LL + E + N A++ + + Q P E L E + R Sbjct: 679 HALSKIAMTHLL-----MHENKPNEANKLFQELKQAYPEHPEV----LAQEGWLAMRQNQ 729 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------- 220 A +AL SP + + + A R++ L K E Sbjct: 730 PQKAVAAFKEALKHSPTSQIIVNLAL-AQFQAGNQDRSLATLEDWLKKHPEDMLAQYNLA 788 Query: 221 ------WNRNRAILLIARSLE--------------NADKGDMIASYHDAIESLKLCDNSI 260 A+ A+ +E K D + A +L + NS Sbjct: 789 NLYLALKQEQEAVSAFAKVVEQAPNNVTALNNLAWLLRKDDPAKALTYAERALDIAPNSP 848 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 L+ + + ++ +L K P +P+I Sbjct: 849 PVMDTLGMLLLEKGETKRGLSLLAKASNRTPKNPDI 884 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 1/108 (0%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + LA +Q A +++ A+ +L + R D A YA +ALDI+P+ Sbjct: 788 ANLYLALKQEQEAVSAFAKVVEQAPNNVTALNNLAWL-LRKDDPAKALTYAERALDIAPN 846 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 +P V + + + E R ++ L + + R +A + Sbjct: 847 SPPVMDTLGMLLLEKGETKRGLSLLAKASNRTPKNPDIRYHFALALAR 894 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 117/337 (34%), Gaps = 33/337 (9%) Query: 32 WGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK--RNYDKGYKALY 89 W +++ +TSP F AW LL + R+ + A ++ L Sbjct: 192 WLDKILQTSP--------AFAPAWSLLGDLERYQGNAEAAEQAYGEAITHRFNNAEDLLN 243 Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMM 146 L+ I N A + +Q ++ + Y LL+ Q + +Y A + Sbjct: 244 RTLIRIYLKNYEGATDDLGTLKKQGV-NHPGVAYTEGLLDFQ----QNKYADALAAFQKS 298 Query: 147 LQIPA--TREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L+ + L Y + G A+++ ++ L P + +A+ + Sbjct: 299 LRQNSKYMPAVFYAGLSYYMQ----GQFKQAEQHLSQFLARFPHSDIAAKALAAARLRRG 354 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 +++ A + L + L +G S + +S A Sbjct: 355 DYTGAESVLESVLNQNPD----DIAALDLMGNVVLGQGKPEQSTTYFQKITTQAPDSAAA 410 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEE 319 + S + + + LEK +++ P ++ I HL + L A RL+E Sbjct: 411 YMKLGLSFMMSGEHEQGIDTLEKAIELDSQLPQADLLVILGHLRAREFDKALTTAERLQE 470 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +S L ++ + L G +A A++IAP Sbjct: 471 KQPQSPLPLNLIGGVYLGKGEETKAQEAFHEALEIAP 507 >gi|292486672|ref|YP_003529542.1| protein hemY [Erwinia amylovora CFBP1430] gi|292897909|ref|YP_003537278.1| Porphyrin biosynthetic protein [Erwinia amylovora ATCC 49946] gi|291197757|emb|CBJ44852.1| Porphyrin biosynthetic protein [Erwinia amylovora ATCC 49946] gi|291552089|emb|CBA19126.1| Protein hemY [Erwinia amylovora CFBP1430] gi|312170738|emb|CBX79000.1| Protein hemY [Erwinia amylovora ATCC BAA-2158] Length = 396 Score = 63.8 bits (154), Expect = 7e-08, Method: Composition-based stats. Identities = 52/370 (14%), Positives = 108/370 (29%), Gaps = 21/370 (5%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL L + + + R A R Sbjct: 21 IAGHQGYVLIQTDNWNIETSVTGLAIILLLSLVIILAIEWLLRRLFRTGARTRGWFTGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 K L+ +A + K+ + YLL + A A+ Sbjct: 81 RRSARKQTNAALVKLAEGDYKQVEKL--LSRHADHAEQPMVNYLLAAEAAQQRGDETRAN 138 Query: 141 EKLEM--------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + L+ L + TR + ++A+ + L+I+P P V Sbjct: 139 QHLDRASELNDNDSLPVEITRV-------RIQLARNEDHAARHGIDRLLEIAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNR--NRAILLIARSLENADKGDMIASYHD 248 Q Y+ + W + L K + +R + + + Sbjct: 192 LAEQAYMRTQAWGALLNILPAMEKIQLGDATHRLELQQQCWLGLMNQAMADQGSDGLKRW 251 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + N + A LI + A+ I+ + K + + + L + N Sbjct: 252 WQNLSRKTRNETALQVAMADHLIVCDDHDTAQTIVLEGLKRHFDERLVLLMPRLKTGNPQ 311 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K + + + + + ++ ++ G + A A++ P + LA Sbjct: 312 QLEKALRQQIKQHGATPLLHSTLGQLLMQHGEWELAGEAFRAALQQRPDAFDYAWLADTL 371 Query: 369 QANSHNTDKI 378 + Sbjct: 372 DRQHKPEEAA 381 >gi|116252907|ref|YP_768745.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257555|emb|CAK08652.1| conserved hypothetical TPR repeat receptor protein [Rhizobium leguminosarum bv. viciae 3841] Length = 1238 Score = 63.4 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 86/265 (32%), Gaps = 16/265 (6%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y A+ + N A + Q+ + L + Q+A E +E Sbjct: 345 YGAIMQAYTAGFLENPRAAIDIIRKAEQR-YPDDPTLPAV-RAQLAQLTDDREQMKEAIE 402 Query: 145 MMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 L A +++ D++ A +A+ ++P A ++ Sbjct: 403 RSLSLDPDHPMALSARAG--YKAIYESDIDGALADLNRAIALAPGASGTLNSLGLLQSSR 460 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A Q K A E + +L S+ D+G M + H+ ++ L + + Sbjct: 461 ----DANGEAEQAFKKAIELDPQDPLLRANLSILYLDQGRMKEAKHEIDTAIALDPSFDI 516 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---E 318 A + + + ++ +A L NP + + ++ L + Sbjct: 517 ALLARGRYYLQTGERDRALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNAD 576 Query: 319 EINKESVESLVIVSKIALEMGSIDQ 343 ++K ++ + A+++ D Sbjct: 577 RLDKNDP--VISAFRTAVDIDDYDA 599 >gi|224124556|ref|XP_002319361.1| predicted protein [Populus trichocarpa] gi|222857737|gb|EEE95284.1| predicted protein [Populus trichocarpa] Length = 820 Score = 63.4 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 103/301 (34%), Gaps = 44/301 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + E L+ +L+ P + E GD+ SA+ +A Sbjct: 450 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPSARAILQEAYAA 507 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK---- 239 P++ + A + E RA L + ++ ++ R L N ++ Sbjct: 508 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERKL 567 Query: 240 -------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 G++ + LK C + + + A N Sbjct: 568 LDEGLQRFPSFFKLWLMLGQLEERLGNLDKAKEIYEAGLKSCPSHVPLWLSLANLEEKTN 627 Query: 275 KKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332 KA +L K NP +PE+ + +E+ G K A L +E S ++ + Sbjct: 628 GLSKARAVLTMARKKNPKNPELWLA--AIRAESRHGNNKEADNLMAKALQECPTSGILWA 685 Query: 333 KIALEMGSIDQAHAKAMLAMKI-AP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++EM Q +K+ A+K +P + +A++ DK W A+ P Sbjct: 686 -ASIEMAPRAQHKSKSADAIKKCSPHDPHVTTAVAKLFWRERK-VDKARSWLNRAVTLAP 743 Query: 391 D 391 D Sbjct: 744 D 744 >gi|302037718|ref|YP_003798040.1| hypothetical protein NIDE2405 [Candidatus Nitrospira defluvii] gi|300605782|emb|CBK42115.1| conserved protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 805 Score = 63.4 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 92/266 (34%), Gaps = 11/266 (4%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A + A + S V +Q+ +L+ +++L R A + +L+ Sbjct: 358 NAGHQAEADRRLSEVLRQN--PRSAQGLILQGKVSLIGRNGKDAVQAFRTVLRDQP-ELA 414 Query: 156 AVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 V L ++ G+ A+ +A +SP P A+ + RA T L Sbjct: 415 HVQHLLGQAYLMTGNSALARESFERATALSPGLPEPGLALAMMESQNGQTQRARTRLKDI 474 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K+ + +R L+ L + + ++ + +MA K SQ Sbjct: 475 LKSYPD-HRQAMELMFDLDLADGNWNHAASTLSRLRQLEGESAALLMA---EGKLYKSQK 530 Query: 275 KKRKAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A E+ + P +A ++ L ++ +R + + ++ Sbjct: 531 DFTRAIAAYERAVTLEADAQDPLVAVVHLDLQNKQPERARRRLEAIITARPNHPYAHGLM 590 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ +G D A A A +I P Sbjct: 591 GEVLSLIGRQDSAMAHFREATRINPT 616 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 87/289 (30%), Gaps = 37/289 (12%) Query: 105 KMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLY 161 K + L ++ L Q L +A E E P E + Sbjct: 397 KDAVQAFRTVLRDQPELAHVQHLLGQAYLMTGNSALARESFERATALSPGLPEPGLALAM 456 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------ 215 ES G A+ L PD E + + W+ A + L++ + Sbjct: 457 MESQN-GQTQRARTRLKDILKSYPDHRQAMELMFDLDLADGNWNHAASTLSRLRQLEGES 515 Query: 216 -----------KNAKEWNR-----NRAILLIARSLENA--------DKGDMIASYHDAIE 251 K+ K++ R RA+ L A + + + Sbjct: 516 AALLMAEGKLYKSQKDFTRAIAAYERAVTLEADAQDPLVAVVHLDLQNKQPERARRRLEA 575 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTV 308 + N A + L ++ A + ++NP P + + + Sbjct: 576 IITARPNHPYAHGLMGEVLSLIGRQDSAMAHFREATRINPTWITPWLDSATLSISQGQAD 635 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ N S E ++++ + GS+D+A A +++ PR Sbjct: 636 SAIRTLQEGLAANPASEELNMLLASVLASQGSVDEAIAAYDAVLRMNPR 684 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 96/314 (30%), Gaps = 41/314 (13%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + AR Q H H + L L I + L M+ T Sbjct: 187 GRLQEARATLHRALQAHPHHLDLLRNLQT--ILDKAHDDKATEQVLRQMIHEEPTLYDPR 244 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + + A+ +AL + P+ A+ + + A L ++ Sbjct: 245 LKLARFFDQRHATDQAEAVLREALTVFPENEQAWLALADFLNIRRGKDAARVAL-RQAAE 303 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ L A + D + Y + + A + A+ + + Sbjct: 304 QLPYSTQIPFALAALYESHKDLAEAKRVYETLAKDYDKKPAGLDAQVKIAQLDFNAGHQA 363 Query: 278 KAEVILEKIWKVNP--------------------------------HPEIANIY-----T 300 +A+ L ++ + NP PE+A++ Sbjct: 364 EADRRLSEVLRQNPRSAQGLILQGKVSLIGRNGKDAVQAFRTVLRDQPELAHVQHLLGQA 423 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 +L++ N+ + R ++ E + ++ + + G +A + +K P Sbjct: 424 YLMTGNSALARESFERATALSPGLPEPGLALAMMESQNGQTQRARTRLKDILKSYPDHRQ 483 Query: 361 FL-LLAQIEQANSH 373 + L+ ++ A+ + Sbjct: 484 AMELMFDLDLADGN 497 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 28/298 (9%), Positives = 88/298 (29%), Gaps = 41/298 (13%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A ++ + + ++ + + L + + + A E + + + + + Sbjct: 290 GKDAARVALRQAAEQLPYSTQIPFALAA-LYESHKDLAEAKRVYETLAKDYDKKPAGLDA 348 Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + G A R ++ L +P + + ++ + A+ + Sbjct: 349 QVKIAQLDFNAGHQAEADRRLSEVLRQNPRSAQGLILQGKVSLIGRNGKDAVQAFRTVLR 408 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + E + +L A + G+ + + L Sbjct: 409 DQPELAHVQHLLGQAYLM----TGNSALARESFERATALSPGL----------------- 447 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 P P +A + T R + + + +++ ++ + L Sbjct: 448 --------------PEPGLALAMMESQNGQTQRARTRLKDILKSYPDHRQAMELMFDLDL 493 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE-QANSHNTDKILYWTQSALHAMPDPL 393 G+ + A + ++ + LL+A+ + + + + + + A+ D Sbjct: 494 ADGNWNHAASTLSRLRQLE-GESAALLMAEGKLYKSQKDFTRAIAAYERAVTLEADAQ 550 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 19/168 (11%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y+ A + +A L K A + + + + + + +++ Sbjct: 47 YIQAGNFPKARVALRNVLKIDP----KDADAYFLVAQVEEKEKNWRNAVANYQQVIEIVP 102 Query: 258 NSIMASICAAKSLISQNKK----RKAEVILEKIWKVNPHPE----IANIYTHLLSENTVG 309 + A I AK + R A+ +LEK HP+ A L ++ + Sbjct: 103 DHKEALIVLAKYYLEAKLVDEVGRAADKVLEK------HPQDPQAQALKIAMLAQQDKMD 156 Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + R L + + ++++ + +MG + +A A A++ P Sbjct: 157 RAIVRGEELIKQYPTEPDVAILLATLYGQMGRLQEARATLHRALQAHP 204 >gi|322514006|ref|ZP_08067080.1| porphoryin biosynthesis protein HemY [Actinobacillus ureae ATCC 25976] gi|322120156|gb|EFX92117.1| porphoryin biosynthesis protein HemY [Actinobacillus ureae ATCC 25976] Length = 417 Score = 63.4 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 83/214 (38%), Gaps = 8/214 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + + + ++ V I +++ S +++ + + Sbjct: 1 MFRVLFLMLLLLVGLIAGPYIAGSQGYVRIETASKVIEMSLVMLVVFFVIVMAVVYTVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V F ++ R + K + GL+ ++ + A K+ S ++ +E Sbjct: 61 VVSRFCRLSKGSYNWFFNRKHKKAQQETLEGLIKMSEGDYSKAEKLFSKNAKHA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES--CRIGDLNSAQRYA 177 ++ LL+ + A A++ L ++ T AV L + G L +A+ Sbjct: 118 VLNLLKAAEAAQQRGDDFSANKYLIEAGELAGTNNVAVE-LARAKILMQQGKLPAARSAI 176 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 ++++P V +Q Y +K ++ A+ + Sbjct: 177 DSLIELAPRNTEVLRLAIQIYKDSKAYN-ALDTI 209 >gi|114319318|ref|YP_741001.1| TPR repeat-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114225712|gb|ABI55511.1| Tetratricopeptide TPR_2 repeat protein [Alkalilimnicola ehrlichii MLHE-1] Length = 955 Score = 63.4 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 12/333 (3%) Query: 54 AWILLFAVSRFFLSCPAMLFHMLH--KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS 111 AW LL R + + G L ++ + + R + Sbjct: 228 AWSLLARYHRIMGDNESAEAAYGRAIEHRAAPGRDHLRRAMVRLDLGDREGTRADIEGLR 287 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 Q + H + LE +AL Y A E L + + A+ +L R+G Sbjct: 288 QGGSAH--PAIPYLEGMLALQNENYGDARRSFEEALAMDRSYSAALLALGQTLRRLGSDE 345 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A+ + + + SP + ++ Y + + A+ FLN+ + ++ + A L Sbjct: 346 QAEHFLNRHVQESPGSLQGIRTLMALYAEQERFDDALQFLNRA---SLDYPGDAADLHEL 402 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288 R GD S ++ + A +L+ + L Sbjct: 403 RGRLMMLSGDPERSVQALRNAVAARPDETGLQELLAVALLRSGETEAGLDTLRAAGTQDV 462 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + + L + L+RA L+ ++ + + +G +++A Sbjct: 463 TSQQLDATMVLFLLQTGRYEEALERAELLQARQPDAASPHSLAGAALMGLGRVEEAREAF 522 Query: 349 MLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 +++ P + + LA +E + + + Sbjct: 523 KKGLELEPDNLSVAMNLANLE-LQTGDREAGRQ 554 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 75/275 (27%), Gaps = 41/275 (14%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G AL GL + + AR H Q+ + LL Q ALA+ + A E Sbjct: 705 GRMALTRGL--VNQGRLADARP-HLDELQERYGDRPEVQALL-GQAALADDRLEPAIEHY 760 Query: 144 EMMLQIPATREFAVYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + L + E+ D A + L+ P+ + + Sbjct: 761 QQALADADPQPRPWVHALAEAQVAADRPGEALATLGRWLEAHPEDRGTWHLYASRQLALG 820 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + + A+ + N L + + D + A +++L S Sbjct: 821 DTAEALQAYERIL-----AQDNDDALALNNAAWLLRDRDTERALDYARRAVELVPESAQI 875 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 LI + +A L + E+ Sbjct: 876 HDTLGVVLIHAGQPAEALETLTRA-------------------------------GELAP 904 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ES ++ E G + A + ++ P Sbjct: 905 ESPTIQYHLAWAEREAGDTEAATRRLNRLLEAEPD 939 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 73/233 (31%), Gaps = 7/233 (3%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L + + A E + L++ +L + GD + ++ + Sbjct: 504 LAGAALMGLGRVEEAREAFKKGLELEPDNLSVAMNLANLELQTGDREAGRQVLEGIQEAH 563 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + + ++ A +L + E +L + D+G A Sbjct: 564 PGHARSAQRLAMLSLQDQDTQGAAKWLQRAIDAQPESLPPHLML----ARIQEDEGRREA 619 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTH 301 + + + + ++ A +S N+ +A V L+ + P ++A Sbjct: 620 ALQTLLGAREHHGDNPELLYALADVQMSLNQTDEAVVSLQSAVERAPDNTGLQLALARAQ 679 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +++ G L E E + +++ + G + A + Sbjct: 680 ARADDNEGAEATLEALLEQQPSHYEGRMALTRGLVNQGRLADARPHLDELQER 732 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 5/136 (3%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L LA A + E +L A+ + + R D A YA +A+++ Sbjct: 811 LYASRQLALGDTAEALQAYERILAQDNDDALALNNAAWL-LRDRDTERALDYARRAVELV 869 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P++ + + + + A + + A+ L + + A E + L A + GD A Sbjct: 870 PESAQIHDTLGVVLIHAGQPAEALETLTRAGELAPESPTIQYHLAWAE----REAGDTEA 925 Query: 245 SYHDAIESLKLCDNSI 260 + L+ + Sbjct: 926 ATRRLNRLLEAEPDFP 941 >gi|308051392|ref|YP_003914958.1| HemY domain protein [Ferrimonas balearica DSM 9799] gi|307633582|gb|ADN77884.1| HemY domain protein [Ferrimonas balearica DSM 9799] Length = 387 Score = 63.0 bits (152), Expect = 9e-08, Method: Composition-based stats. Identities = 53/381 (13%), Positives = 111/381 (29%), Gaps = 9/381 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ Y ++ + + + V I G+ TS + +L LL Sbjct: 1 MIRILFYTLLVLAGLYAGPKLVANQGYVLIAVGDYTIETSVVKGVLMLLVLFGLLQLLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + K G +++A + A K + Sbjct: 61 LVVKLIGLTGFTLSSPQRWRRKRSRKHTLQGALALAQEDWAAAEK--AMARGAQAGEYPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + YL + A L + P + + G L A++ Sbjct: 119 INYLAAARAAHHGGDPEACERYLAEAQKQPGAEKAVQVTRLRYQLDDGQLAQARQGLEAL 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 P V + ++ Y ++W + K+ A L + + Sbjct: 179 DAKLRQQPQVLKLALELYRRQQDWDALARLMPALSKHKVLTEAELAALPEEIEVVCLSQS 238 Query: 241 DMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEV-ILEKIWKVNPHPEIANI 298 + + L + + A A L +L++ K P P + + Sbjct: 239 PDREALEQRWQGLSRRLKRSESVLVAYANGLARFGDAAAGRKLVLDRFDKETPQPALLAV 298 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--IDQAHAKAMLAMKIAP 356 LSE+ + L+ +S + AL +A A++ AP Sbjct: 299 -LPALSEDAAEAVSHI--LQRKYPDSDLLELKDCYAALAEQDRAWRRAKEWRQKAVEQAP 355 Query: 357 RKEIFLLLAQIEQANSHNTDK 377 E + LA++++ Sbjct: 356 SAERYRALARVQEQLGEREGA 376 >gi|241738333|ref|XP_002414072.1| pre-mRNA splicing factor, putative [Ixodes scapularis] gi|215507926|gb|EEC17380.1| pre-mRNA splicing factor, putative [Ixodes scapularis] Length = 939 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 101/297 (34%), Gaps = 48/297 (16%) Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + LE +LQ P + GD+ +A+ + A +P++ Sbjct: 583 KSSGTRSTLEALLQRAVAHCPKAEVLWLMG-AKSKWMAGDIPAARSILSLAFQANPNSEE 641 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD----------- 238 + A V+ E+ RA L + + +A + + +L + Sbjct: 642 IWLAAVKLESENNEFERARRLLAKARSSAPTARVMMKSVRLEWALGDLRMASELLEEGLK 701 Query: 239 ------------------KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +G + + LK C S+ + ++ S KA Sbjct: 702 LYADFPKLWMMKGQILQSQGQTDEARATYNQGLKKCPTSVPLWLLLSRLEESGGALTKAR 761 Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLK--RALRLEEINKESVESLVIVSKIALE 337 +LEK NP HPE+ + + K + + ++ S ++ S+ A+ Sbjct: 762 SVLEKARLRNPCHPEL---WLEAVRVEARAGFKEIALTLMAKAMQDCPGSGILWSE-AIF 817 Query: 338 MGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 M Q K++ A+K P + L ++++ T+K+ W + PD Sbjct: 818 MEPRPQRKTKSVDALKRCEHDPY--VLLAVSKLFWTERK-TNKVREWLNRTVKIEPD 871 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 85/225 (37%), Gaps = 22/225 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ A+ + +P+ P A + + + A + K + + I Sbjct: 288 DIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKIQTARNLI---MKGGEMCPNSEDIW 344 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L A L+ D + + ++++ NS+ I A++ + + + + + K + Sbjct: 345 LEASRLQPTDLAKAVIA-----QAVRQIPNSVRLWIKASEL---EGELKAKKRVFRKALE 396 Query: 289 VNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P+ + L E+ L RA E SVE + ++++ + D A Sbjct: 397 TIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVELWLALARL----ENYDNARK 449 Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A ++N + A+ ++ Sbjct: 450 VLNKARENIPTDRQIWITAAKLEEA-NNNAHMVEKIIDRAITSLR 493 >gi|94309237|ref|YP_582447.1| hypothetical protein Rmet_0292 [Cupriavidus metallidurans CH34] gi|93353089|gb|ABF07178.1| Tetratricopeptide TPR_2 repeat protein [Cupriavidus metallidurans CH34] Length = 635 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 102/325 (31%), Gaps = 48/325 (14%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + + L +L +I+L ++ + + A + Sbjct: 77 AARAQRTPLPNVSLSPDILYRVLAAEISLQRGMAGASYRTYLDLARETRDPRLAQRATEI 136 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + A A +++P +P ++ + VL W A L+++ A + Sbjct: 137 -AFNARSSQQALDGARLWSELAPKSPAASQVLATLLVLNGRWEEAEPLLSRQLATAPAAH 195 Query: 223 RNRAIL--------------------------------LIARSLENADKGDMIASYHDAI 250 R AIL +A + G+ + + Sbjct: 196 RGDAILQLQQQMSRTSDPAGAVAVLQRLTANDSKLPETHLALARAQEIAGNSQGALTELD 255 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305 E+L+L N A++ +A+ K+ ++++ +P H +A +Y Sbjct: 256 EALRLKPNLEAAALMSAEMQAESA-PDKSIAVMKRFLAKSPSSVNGHITLARLYLQQNDM 314 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE--- 359 ++ L ++ + + +L+ S D A +++A P Sbjct: 315 DSAR--AEFEVLRKVAPTDPRVPLALGLTSLQARSYDDAERYLKEYLQMAEKSPAANPDI 372 Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384 + LAQI + + + W Sbjct: 373 AYQYLAQIAE-EKKDYPAAIDWLDR 396 >gi|319789142|ref|YP_004150775.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] gi|317113644|gb|ADU96134.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] Length = 583 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 14/193 (7%) Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 P A + + W +AI L + E + L+ + A Sbjct: 45 FKFKPTASYYYMLFLNYQA-GGNWQKAIEALEKA----AELEPRNTVYLVEAAKIAASHQ 99 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA 296 + E+LK N A A L+ + K +AE + K+ ++P + +A Sbjct: 100 KFKEAERLIREALKRNPNDPDALKLYAGLLVVEGKLAEAENVYRKLISIHPDRDSFVFLA 159 Query: 297 NIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 N+ + + L+RA +L + ++ +A ++ Sbjct: 160 NLLINRGEPDKALEVLQRARKLY---PNDYLVNYFLGQVYFLKKDYKRARLYLERSISAN 216 Query: 356 P-RKEIFLLLAQI 367 P + FLLL+++ Sbjct: 217 PGFESAFLLLSKV 229 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 89/261 (34%), Gaps = 16/261 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L+ G+ A KA ++ P + +++ A + + K Sbjct: 57 LFLNYQAGGNWQKAIEALEKAAELEPRNTVYLVEAAKIAASHQKFKEAERLIREALKRNP 116 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N L + +G + + + + + + + A LI++ + KA Sbjct: 117 ----NDPDALKLYAGLLVVEGKLAEAENVYRKLISIHPDRDSFVFL-ANLLINRGEPDKA 171 Query: 280 EVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +L++ K+ P+ + N + L + +L R N + +++SK+ Sbjct: 172 LEVLQRARKLYPNDYLVNYFLGQVYFLKKDYKRARLY-LERSISANPGFESAFLLLSKVY 230 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWTQSALHAMPD-- 391 + + A +K P I+ L LA + A + + + + D Sbjct: 231 MNLKDYPHAEKFLKEVLKKEPD-NIYALRELALLYLAEGKTKEAVNALNRLVSLSPYDLR 289 Query: 392 -PLWISDDGYLSSVWLPLSPI 411 W++ + + + + P+ Sbjct: 290 LLSWVAANLFQLKEYRQVIPV 310 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 95/276 (34%), Gaps = 23/276 (8%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ + A ++ +++ + L L + + E + A ++ I Sbjct: 94 IAASHQKFKEAERLIREALKRNPNDPDALK--LYAGLLVVEGKLAEAENVYRKLISIHPD 151 Query: 153 R--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R + +L G+ + A +A + P+ V + Q Y L K++ RA + Sbjct: 152 RDSFVFLANLLI---NRGEPDKALEVLQRARKLYPNDYLVNYFLGQVYFLKKDYKRARLY 208 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + + + S + D + E LK ++I A A Sbjct: 209 LERSISANPGFES----AFLLLSKVYMNLKDYPHAEKFLKEVLKKEPDNIYALRELALLY 264 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINKES 324 +++ K ++A L ++ ++P+ ++ A L V + ++ ++N + Sbjct: 265 LAEGKTKEAVNALNRLVSLSPY-DLRLLSWVAANLFQLKEYRQVIPV--IEKIAKLNPGN 321 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMK---IAPR 357 ++ G++ +A + P Sbjct: 322 PNVYFMLGLAYEMSGNLKKALEAYKKVLSFHIENPT 357 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 105/316 (33%), Gaps = 40/316 (12%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IP--ATREFAVYSLYFESCRI 167 + + N+YLV Q+ ++ Y A LE + P + + +Y + Sbjct: 177 RARKLYPNDYLVNYFLGQVYFLKKDYKRARLYLERSISANPGFESAFLLLSKVY---MNL 233 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--- 224 D A+++ + L PD + + Y+ + A+ LN+ + ++ Sbjct: 234 KDYPHAEKFLKEVLKKEPDNIYALRELALLYLAEGKTKEAVNALNR-LVSLSPYDLRLLS 292 Query: 225 ------------RAILLIARSLENADKGDM------------IASYHDAIESLKLCDNS- 259 R ++ + + + G+ + A+E+ K + Sbjct: 293 WVAANLFQLKEYRQVIPVIEKIAKLNPGNPNVYFMLGLAYEMSGNLKKALEAYKKVLSFH 352 Query: 260 --IMASICA-AKSLISQNKKRKAEVILEKIWKV--NPHPEIANIYTHLLSENTVGKLKRA 314 + A +A+ + +K+W++ NP I +T G Sbjct: 353 IENPTVLERLAIVNYKLGNYERAKELYQKLWEITGNPAYLIRTALLEDKLGDTQGAYSLL 412 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 L K++ + L ++ ++ ++G D+ +K+ P + LA Sbjct: 413 KELGGNPKDNPDLLFYLAYLSEKLGRYDETENYLKELVKLKPTPDSLNYLAYFYAQRGKE 472 Query: 375 TDKILYWTQSALHAMP 390 ++ L AL P Sbjct: 473 LNRALELVNRALKEEP 488 >gi|86148164|ref|ZP_01066462.1| HemY protein [Vibrio sp. MED222] gi|85834011|gb|EAQ52171.1| HemY protein [Vibrio sp. MED222] Length = 393 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 3/157 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R I V+ + S V I+ N+ S ++ + L A L Sbjct: 1 MIRWIFLLLVLGAGLIVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIALLAALFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + G++ + + A K + + H Sbjct: 61 LFKKLMYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAEKKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 L YL+ Q A + + +K + AV Sbjct: 119 LCYLVASQAAHEQGNTSE-RDKYIELASQQEDSLLAV 154 >gi|127511249|ref|YP_001092446.1| HemY domain-containing protein [Shewanella loihica PV-4] gi|126636544|gb|ABO22187.1| HemY domain protein [Shewanella loihica PV-4] Length = 388 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 126/396 (31%), Gaps = 19/396 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW----I 56 M+R + Y ++ + + + +S + I G+ TS + F + Sbjct: 1 MIRALIYLVIVIIGLIASPYLSWLKGYIYIAIGDYELETSLVFAIFAAVMFYVGLVLLEM 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L+ L+ + K L G +++A + A K + Sbjct: 61 LVVWTINLVLNSRLLPEKWRRKAARK---HTLT-GALALAEEDWSTAEK--AMARGADKG 114 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L L + A ++ L + PA + + + + G+L A+ Sbjct: 115 EIPALNLLAAARAAQHRNDHDARDHYLNEAAKDPAAYKAVLTTRVRYLLQQGELTRARAL 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + S P V + Y ++WS L KK L +LE Sbjct: 175 LDELNPTSKSKPPVLALALDLYRAQQDWSALKLLLPIVKKRGIIDESEHQALNAEVNLEL 234 Query: 237 A--DKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 G + A + + I A L ++ +A +L K K Sbjct: 235 LKQAAGQNEQALEKAWHWLSRAERKQTEFI---AQYALGLAKFERRDEAIKLLMKQAKQQ 291 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P I + +L+ + K+ LE+ E E ++ + + ++ Sbjct: 292 PTQAIFDALPQVLTPADLDARKQLFELEKKLGEQTEYQACIAALYDQSKEFRESQKWWAK 351 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + +P K+ +L LA+ + + + ++A+ Sbjct: 352 VCQQSPTKQRWLALAEACEHLGEQNQALQNYRKAAI 387 >gi|182677437|ref|YP_001831583.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633320|gb|ACB94094.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 1085 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 81/235 (34%), Gaps = 35/235 (14%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +L+ + + A + + +L ++ L + + GDL++A + KA+ Sbjct: 47 FLMTALDYHRAGRLDQAADLYQRILLAEPDHFLCLHHLGLIAHQKGDLDTAIAWIEKAIR 106 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + PD + Y ++A+ + ++ A + +LE D+G+ Sbjct: 107 VKPDYAEALANLAALYRAKGLLTQAVETGRTAVLHGQD--HVPAHCNLGGALE--DQGEW 162 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 A+ ++ + I ++ AA L ++ +A Sbjct: 163 EAALACYRRAVAINPAFIEGAMNAANVLRRLHRHEEA----------------------- 199 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L+ L ++ E +++ I ++G D A A A+ + P Sbjct: 200 --------LQTCEALIACRPDAAEPHMVLGNILRDLGQFDAALAAYEQALALRPD 246 >gi|15600450|ref|NP_253944.1| hypothetical protein PA5257 [Pseudomonas aeruginosa PAO1] gi|107104359|ref|ZP_01368277.1| hypothetical protein PaerPA_01005434 [Pseudomonas aeruginosa PACS2] gi|116053405|ref|YP_793730.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa UCBPP-PA14] gi|218894359|ref|YP_002443229.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa LESB58] gi|254238046|ref|ZP_04931369.1| hypothetical protein PACG_04161 [Pseudomonas aeruginosa C3719] gi|254243859|ref|ZP_04937181.1| hypothetical protein PA2G_04687 [Pseudomonas aeruginosa 2192] gi|313110330|ref|ZP_07796220.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa 39016] gi|9951568|gb|AAG08642.1|AE004938_4 hypothetical protein PA5257 [Pseudomonas aeruginosa PAO1] gi|115588626|gb|ABJ14641.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa UCBPP-PA14] gi|126169977|gb|EAZ55488.1| hypothetical protein PACG_04161 [Pseudomonas aeruginosa C3719] gi|126197237|gb|EAZ61300.1| hypothetical protein PA2G_04687 [Pseudomonas aeruginosa 2192] gi|218774588|emb|CAW30405.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa LESB58] gi|310882722|gb|EFQ41316.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa 39016] Length = 412 Score = 63.0 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 128/376 (34%), Gaps = 29/376 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 +S V I + + Y +S + L++L +L+ V R S ++ Sbjct: 22 ISEQAGYVLIAYKSFRYESSLWSFLALLAVVWLLVVLVRLVLRLLGSSGRVVNPWSRYNR 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIA 139 + A ++GL + N P A + ++ L++ L + A +Y+ A Sbjct: 82 RRRVQMAEHSGLRDLGEGNWPQALRHLRRAAE---MGERPLMHYLGAARAANELERYDEA 138 Query: 140 HEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + L + + + L GD A+ + + P V + Q Sbjct: 139 DDLLNRAREREPDAQL-LVGLTRAQLLINRGDYPQARNTLEELHGLQPQHRTVLRLMQQL 197 Query: 198 YVLAKEWSRAITFL------NQKKKNA--KEWNRNRAILLIARSLEN-ADKGDMIASY-- 246 YV +W +A+ L + K++ ++ R + + + E ++G+ Sbjct: 198 YVTQHDW-QALCVLLPELRKERVLKDSELRDLERRAWVASLQEAGERGLNEGETALQPLT 256 Query: 247 ---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + +L+ + A L+ + +AE +L K + +Y + Sbjct: 257 QRWQNVPSALRADPAIV---AGYAAQLLRLGAEEEAEEVLRHALKQGFDATLVQLYGQVR 313 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-- 361 + +L+ A + + L+ + ++ L +A ++ E Sbjct: 314 GRDPGKQLQAAEGWLKEHPNDPGLLLTLGRLCLINKLWGKAREYLEASLSFQRSAETCAE 373 Query: 362 --LLLAQIEQANSHNT 375 LLAQ+ + N Sbjct: 374 LGRLLAQLGEVERSNQ 389 >gi|84393567|ref|ZP_00992321.1| HemY protein [Vibrio splendidus 12B01] gi|84375846|gb|EAP92739.1| HemY protein [Vibrio splendidus 12B01] Length = 393 Score = 62.6 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 3/157 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R I F V+ + S V I+ N+ S ++ + L A L Sbjct: 1 MIRWIFLFLVLGAGLVVGTQFSGQQGYVLISIANKTIEMSVTTLVIFVIALLAALFGLEY 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + + + ++ R + + G++ + + A + + + H Sbjct: 61 LFKKLMYASSTTWNWFSVRKLKRSRRYTNEGIIKLLEGDWKGAERKVTRWANHH--DMPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 L YL+ Q A + + +K + AV Sbjct: 119 LCYLVASQAAHEQGNTSE-RDKYIELASQQEDSLLAV 154 >gi|296392116|ref|ZP_06881591.1| putative enzyme of heme biosynthesis [Pseudomonas aeruginosa PAb1] Length = 412 Score = 62.6 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 128/376 (34%), Gaps = 29/376 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 +S V I + + Y +S + L++L +L+ V R S ++ Sbjct: 22 ISEQAGYVLIAYKSFRYESSLWSFLALLAVVWLLVVLVRLVLRLLGSSGRVVNPWSRYNR 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIA 139 + A ++GL + N P A + ++ L++ L + A +Y+ A Sbjct: 82 RRRVQMAEHSGLRDLGEGNWPQALRHLRRAAE---MGERPLMHYLGAARAANELERYDEA 138 Query: 140 HEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + L + + + L GD A+ + + P V + Q Sbjct: 139 DDLLNRAREREPDAQL-LVGLTRAQLLINRGDYPQARNTLEELHGLQPQHRTVLRLMQQL 197 Query: 198 YVLAKEWSRAITFL------NQKKKNA--KEWNRNRAILLIARSLEN-ADKGDMIASY-- 246 YV +W +A+ L + K++ ++ R + + + E ++G+ Sbjct: 198 YVTQHDW-QALCVLLPELRKERVLKDSELRDLERRAWVASLQEAGERGLNEGETALQPLT 256 Query: 247 ---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + +L+ + A L+ + +AE IL K + +Y + Sbjct: 257 QRWQNVPSALRADPAIV---AGYAAQLLRLGAEEEAEEILRHALKQGFDATLVQLYGQVR 313 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-- 361 + +L+ A + + L+ + ++ L +A ++ E Sbjct: 314 GRDPGKQLQAAEGWLKEHPNDPGLLLTLGRLCLINKLWGKAREYLEASLSFQRSAETCAE 373 Query: 362 --LLLAQIEQANSHNT 375 LLAQ+ + N Sbjct: 374 LGRLLAQLGEVERSNQ 389 >gi|91226890|ref|ZP_01261487.1| putative heat shock protein [Vibrio alginolyticus 12G01] gi|269966530|ref|ZP_06180613.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91188853|gb|EAS75138.1| putative heat shock protein [Vibrio alginolyticus 12G01] gi|269828874|gb|EEZ83125.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 391 Score = 62.6 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 54/343 (15%), Positives = 110/343 (32%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E +++ P Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---- 138 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y E+ + +V Y +EW +AI + NQ Sbjct: 139 -----YKEA-------------------------ALQQLVTIYQQTREWEKAIYYANQLA 168 Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + +R RA + ++ + G+ + ++L + ASI + + Sbjct: 169 KLGNKRSRMRANIAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLE 228 Query: 273 QNK----KRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +LE K + + P IA Y HL E+ + + RA +++ S E Sbjct: 229 SEDYKHTIKYLTGVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 ++++++ ++ A + P + F L I +A + Sbjct: 288 --LMLAQLVAHHENVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|238790398|ref|ZP_04634169.1| hypothetical protein yfred0001_2660 [Yersinia frederiksenii ATCC 33641] gi|238721505|gb|EEQ13174.1| hypothetical protein yfred0001_2660 [Yersinia frederiksenii ATCC 33641] Length = 389 Score = 62.6 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 85/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ Y +W+ AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLIIYQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAASADKQCARVSIMQGRLYLAKGEYAKGVEALERVLEQDKEIVSEALPMLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPEAWTNF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|156401113|ref|XP_001639136.1| predicted protein [Nematostella vectensis] gi|156226262|gb|EDO47073.1| predicted protein [Nematostella vectensis] Length = 993 Score = 62.6 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 105/284 (36%), Gaps = 25/284 (8%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEVQIALAERQYNI 138 GY L L++ A ++ A +H+Y + + L LL+ + Sbjct: 121 GYINLAAALVA--AGDLEGA--VHAYATALQYNPDLYCVRSDLGNLLKA-----LGRLEE 171 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A ++ + A +L G++ A + KA+ + P+ + Sbjct: 172 AKACYLKAIETQPSFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVL 231 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ + RA+ + + N A++ + ++G + + +++L N Sbjct: 232 KEARIFDRAVAAYLRALNLSP----NHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPN 287 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317 A A +L Q K +AE +++P H + N ++ E GK++ ++RL Sbjct: 288 FPDAYCNLANALKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKRE--QGKIEESIRL 345 Query: 318 EEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E + ++ + + G + +A A++I P Sbjct: 346 YCKALEIFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIHPT 389 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ Q H + L L I + + + + + P A Sbjct: 303 GKVSEAEECYNTALQLSPTHADSLNNL--ANIKREQGKIEESIRLYCKALEIFPEF-AAA 359 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I P + ++ AI ++ + Sbjct: 360 HSNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQGAIQCYSRAIQ 419 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 420 INPAF----ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPSFPDAYCNLAHCL 469 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ + N +V+ + + ++A + +++ A +L Sbjct: 239 RAVAAYLRALNLSPNHAVVHGNLACVYYEQGLIDLAVDTYRRAIELQPNFPDAYCNLANA 298 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G ++ A+ AL +SP + + +I + + E+ Sbjct: 299 LKEQGKVSEAEECYNTALQLSPTHADSLNNLANIKREQGKIEESIRLYCKALEIFPEF-- 356 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + E++++ A L + A Sbjct: 357 --AAAHSNLASVLQQQGKLQEALLHYKEAIRIHPTFADAFSNMGNLLKEMQDIQGAIQCY 414 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A++ H S N ++ ++ ++ ++ Sbjct: 415 SRAIQINPAFADAHSNLASV--HKDSGNIPEAIQSYRTALKLKPSFPDAYCNLA 466 >gi|327191083|gb|EGE58135.1| putative exported protein, TonB-dependent receptor [Rhizobium etli CNPAF512] Length = 1226 Score = 62.6 bits (151), Expect = 1e-07, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 83/263 (31%), Gaps = 18/263 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +A TG + P A ++Q + L + Q+A E +E Sbjct: 338 QAYTTGFL-----ENPRAALEIIKKAEQRYPDDPTLPAV-RAQLAQLTDDREQMKEAIER 391 Query: 146 MLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L P + + Y + D+ A +A++++P ++ Sbjct: 392 SLALDPDHPMALSARAEYKAAY-ESDIGGALADLNRAIELAPGDSGSLNSLGLLQSSR-- 448 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A K A E + IL ++ D+ + + ++ L + +A Sbjct: 449 --DANGEAETAFKKAIELDPQNPILHANLAMLYLDQSRTKEAKREIDTAIALDPSFDIAL 506 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEI 320 + + + ++ KA L NP + + +L L + + Sbjct: 507 LVRGRYYLQIGERDKALEDLLAASTANPAHSQSQLMLAAAHYEKGDRLPAEQALDNADRL 566 Query: 321 NKESVESLVIVSKIALEMGSIDQ 343 +K ++ + A+++ D Sbjct: 567 DKNDP--VISAFRTAVDIDDYDA 587 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 47/331 (14%), Positives = 107/331 (32%), Gaps = 44/331 (13%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPAT 152 S A + + ++ T + V LL+ IA +E++Y A + + + + T Sbjct: 242 SAFDGRQAAAATLQNIRGRKLTVAQQARVDLLDATIAGSEKRYGDAAKLFQKALPHLDPT 301 Query: 153 R--------------------------EFAVYSLYFESCRIG---DLNSAQRYATKALDI 183 R Y ++ G + +A KA Sbjct: 302 RRNMAQYGGYFARSLADPAHSEPPPATTTGPYGAIMQAYTTGFLENPRAALEIIKKAEQR 361 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDM 242 PD P + + + + + + + + + + L AR+ A + D+ Sbjct: 362 YPDDP----TLPAVRAQLAQLTDDREQMKEAIERSLALDPDHPMALSARAEYKAAYESDI 417 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIAN 297 + D +++L + S++ +AE +K +++P H +A Sbjct: 418 GGALADLNRAIELAPGDSGSLNSLGLLQSSRDANGEAETAFKKAIELDPQNPILHANLAM 477 Query: 298 IYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +Y ++ + KR ++ +L++ + L++G D+A + A P Sbjct: 478 LYLD---QSRTKEAKREIDTAIALDPSFDIALLVRGRYYLQIGERDKALEDLLAASTANP 534 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 L+ + +A Sbjct: 535 AHSQSQLMLAAAHYEKGDRLPAEQALDNADR 565 >gi|213586160|ref|ZP_03367986.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 283 Score = 62.6 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 17/235 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQGSE 247 >gi|107023360|ref|YP_621687.1| HemY-like [Burkholderia cenocepacia AU 1054] gi|116690443|ref|YP_836066.1| HemY domain-containing protein [Burkholderia cenocepacia HI2424] gi|170733763|ref|YP_001765710.1| HemY domain-containing protein [Burkholderia cenocepacia MC0-3] gi|105893549|gb|ABF76714.1| HemY-like protein [Burkholderia cenocepacia AU 1054] gi|116648532|gb|ABK09173.1| HemY domain protein [Burkholderia cenocepacia HI2424] gi|169817005|gb|ACA91588.1| HemY domain protein [Burkholderia cenocepacia MC0-3] Length = 395 Score = 62.6 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 124/393 (31%), Gaps = 13/393 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V + + S + + + L Sbjct: 3 LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K N Sbjct: 63 IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDA--NLG 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ A +Y + + P ++ + + D + A Sbjct: 121 AASLVGATAAHRMHEYTR-RDDWLSKVDAPEWQDARLLAAADMRADARDADGALAALADM 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--- 237 + ++ K W+ + L + + + + A+ L ++ EN Sbjct: 180 QAGGKRIH-AQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLRE 237 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + D A + S + AA+ L+ ++ +A I+E N + Sbjct: 238 RRHDPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLR 297 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + + +++A ++ + E + L + ++ + +A + A+K+A Sbjct: 298 RYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADN 357 Query: 358 K----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 + LA++ + ++ +SAL Sbjct: 358 EALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|90406698|ref|ZP_01214891.1| HemY protein [Psychromonas sp. CNPT3] gi|90312151|gb|EAS40243.1| HemY protein [Psychromonas sp. CNPT3] Length = 394 Score = 62.6 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 85/220 (38%), Gaps = 6/220 (2%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRL-YRTSPFVILSILYFFLFAWILLF 59 MLR++ ++ L + +S + I++ Y + +++ F F + L Sbjct: 1 MLRIMIIIGILLLGLLLGPEISANKGYLLISFDRYTTYEMTLINASLLVFLFYFVLLFLE 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + R L+ ++ R +K K G++++ N A+K+ + + + + Sbjct: 61 WMIRRLLALSSLTSGWFGVRKTNKAKKNSLLGMLALFEGNTKQAQKLLAKSAAR--SESP 118 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD--LNSAQRYA 177 L Y+ + A E +Y + E + L + L + +I +A Sbjct: 119 ALTYIAAARAAQLENKYELRDEYFQEALSSQKECHLGI-GLVWVELQIEAHQYENALATL 177 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + P+ + + Y +EW R + LN+ +KN Sbjct: 178 RELDNNFPNNKKIVTLYLGIYPALEEWKRYLDILNKHRKN 217 >gi|327272197|ref|XP_003220872.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR repeat-containing protein 1-like [Anolis carolinensis] Length = 1054 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 91/268 (33%), Gaps = 15/268 (5%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A E + LQ+ A+++L G A ++ P+ Sbjct: 700 LTKDLAEAKEYYKRALQLNPQHNRALFNLGNLLKSQGKKGEAVLLLRDSIRYGPEFADAY 759 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ ++ A +N + + L + D G + + Sbjct: 760 SSLASLLAEQEQLKEAEEVYQAGIENCPDSSD----LHNNYGVFLVDTGSPETAVSHYQK 815 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSEN 306 +++L N +A + + S + ++AE+ ++ KV PEI A Y E+ Sbjct: 816 AIQLSPNHHVAMVNLGRLYRSLGQNKEAEMWYKRALKVTRKPEILTPLGALYYNTGRYED 875 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML-AMKIAPRKEIFLLLA 365 LK + + E+ + ++++ MG +A + A E + LL+ Sbjct: 876 A---LKVYREAAVLQPSNKETRLALAQVLAMMGQTKEAEQMTSHIVTEEAECLECYRLLS 932 Query: 366 QIEQANSHNTDKILYWTQSALH-AMPDP 392 I N +K L AL DP Sbjct: 933 AIYSKQ-ENYNKALEAIDKALQLKPKDP 959 >gi|196234038|ref|ZP_03132873.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196221887|gb|EDY16422.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 733 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 76/249 (30%), Gaps = 15/249 (6%) Query: 117 HNEYLVYLLEVQIALA----ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + L + E + A +L + A++ L + ++G + Sbjct: 2 PSPPLRTVPEAFALALQLHQAGRLAEAETLYRQILAVEPNHANALHFLGVVAHQVGQQET 61 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A +A+ + P + Y AI + E N A++ Sbjct: 62 AIDLIRRAIALDPANAVAHSNLGYAYHAQGRTEEAIAEFRRAL----ELNPGDALVYYNL 117 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 + + ++L+ N A A +L + + +A + W++ P Sbjct: 118 GNALGECSRRDEAIAAYEQALRYRPNYPAACFNLANTLRNHGRLDRAIAAYRQAWRLVPG 177 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 + N + + R L ++ +S + + G +D+A Sbjct: 178 DADVAINLGNALVEQREFSEATAVLR-HAL-QLRPDSAIAHYNLGNALRAQGLLDEAMLA 235 Query: 348 AMLAMKIAP 356 A+++ P Sbjct: 236 FRRALEMDP 244 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 87/275 (31%), Gaps = 21/275 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+++ A + + L A+ + A + L++ Sbjct: 50 GVVAHQVGQQETAIDLIRRAIALDPANAVAHSNL--GYAYHAQGRTEEAIAEFRRALELN 107 Query: 151 ATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 Y+L E R + +A +AL P+ P + RA Sbjct: 108 PGDALVYYNLGNALGECSRRDEAIAAY---EQALRYRPNYPAACFNLANTLRNHGRLDRA 164 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I Q + A + I ++ + + +L+L +S +A Sbjct: 165 IAAYRQAWRLVP----GDADVAINLGNALVEQREFSEATAVLRHALQLRPDSAIAHYNLG 220 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEIN 321 +L +Q +A + + +++PH ++ + +L + L Sbjct: 221 NALRAQGLLDEAMLAFRRALEMDPH--LSEAWHNLGNAFRDRGQFDEAIASYQQALAS-K 277 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++V + + G +D+A A+++ P Sbjct: 278 CDYAAAIVSLGNACKDQGRLDEAMNAFRRALQLQP 312 >gi|161524050|ref|YP_001579062.1| HemY domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189351189|ref|YP_001946817.1| HemY protein [Burkholderia multivorans ATCC 17616] gi|221199355|ref|ZP_03572399.1| putative hemY protein [Burkholderia multivorans CGD2M] gi|221205743|ref|ZP_03578758.1| putative hemY protein [Burkholderia multivorans CGD2] gi|160341479|gb|ABX14565.1| HemY domain protein [Burkholderia multivorans ATCC 17616] gi|189335211|dbj|BAG44281.1| HemY protein [Burkholderia multivorans ATCC 17616] gi|221174581|gb|EEE07013.1| putative hemY protein [Burkholderia multivorans CGD2] gi|221180640|gb|EEE13043.1| putative hemY protein [Burkholderia multivorans CGD2M] Length = 395 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 131/398 (32%), Gaps = 23/398 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + + L Sbjct: 3 LRGIVWLAVLFAIAVALATVGRFDAGQVLIVYPPYRVDVSLNLFVISVVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARTRNEKAQASLRDAIANLYAGRFSRAEKAAREALAVDANQGAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + A A + + + E + ++ A L R ++ A A Sbjct: 123 SLV-----AATAAHRMHEYTRRDEWLSKVDAPEWQDARLLATADMRADARDADGALAALA 177 Query: 181 LDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + + ++ K W+ + L + + + + A+ L ++ EN + Sbjct: 178 DLQAGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLR 236 Query: 240 GDMIASYHDAIESLKLCDNSIMA-------SICAAKSLISQNKKRKAEVILEKIWKVNPH 292 HDA L++ + A + AA+ L++ ++ +A I+E N Sbjct: 237 ----ERRHDADALLEIWQSLSPAERQSPRLADLAAELLVALERRTEARRIVEDALAHNWD 292 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + Y + + +++A ++ + E + L + ++ + +A + A+ Sbjct: 293 ARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLEAAL 352 Query: 353 KIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+A + LA++ + ++ +SAL Sbjct: 353 KLADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|262274458|ref|ZP_06052269.1| putative N-acetylglucosaminyl transferase [Grimontia hollisae CIP 101886] gi|262221021|gb|EEY72335.1| putative N-acetylglucosaminyl transferase [Grimontia hollisae CIP 101886] Length = 272 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 90/256 (35%), Gaps = 45/256 (17%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + ++ A + +++ P +EFA+ Sbjct: 1 MVAGFFDRAEKIFHQLIEEPDYKEFAL--------------------------------- 27 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDA 249 + ++ Y +EW +AI + K+ K + R+ + +++ D + Sbjct: 28 -QQLLAIYQQTREWDKAIDIATKLVKSGKSKLKRDISHFYCELAMQAMGDSDEKGARQLL 86 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHLL 303 ++L + + AS+ A+ I+ + + A +LE++ + +P P + Y + Sbjct: 87 KKALATDKSCVRASLMLARLDIASEEYKDATKVLEQVLEQDPDFVSEALPLLEQCYNQMN 146 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 E + + R +E+ S E ++++ I + + A + + P + F Sbjct: 147 KEMALIRFLR-NCIEKNAGASAE--LMMADIISDHENPAMAQSFLTRQLTKNPTMKGFHK 203 Query: 364 LAQIEQANSHNTDKIL 379 L ++ + Sbjct: 204 LMELHVGQ-AEEGRAK 218 >gi|82703800|ref|YP_413366.1| HemY-like [Nitrosospira multiformis ATCC 25196] gi|82411865|gb|ABB75974.1| HemY-like protein [Nitrosospira multiformis ATCC 25196] Length = 404 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 125/398 (31%), Gaps = 41/398 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + I ++ V I S +++ +L + L Sbjct: 1 MKGALWLLALFMIAVAVTIAATYNSGYVLIVAQPYRIELSLNLLVLLLLAIILMGYLGMR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F PA L +R +K + GL + A K + V + Sbjct: 61 LIAFTARLPAELSEFRTRRRREKALEGTLEGLKAFFERRYAKAEKSAATVLKMEDSTAFS 120 Query: 121 LVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + ++ + A R Y+ ++ + A +E A+ L ++ + D + Sbjct: 121 AINAIVAARAAHGLRNYSR-RDEFIAQAETSAPQEVALR-LMTQAELLLDE----HRPEE 174 Query: 180 ALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWN-----RNR 225 AL + P + ++ W+ + L Q ++ + E + R R Sbjct: 175 ALRLLHHLPPGELRRHPGALKLELEAQQNVGNWNAVLELLGQLEQHDGPEASLVKQLRGR 234 Query: 226 AILLIARS--------LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A + RS E + + + S ++ Q+ Sbjct: 235 AHIENLRSRMLNPQALKEYWESLSPSEKKDGKVAAAAARAFSATGDCAMVHHIVEQS--- 291 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 LE W E+A +Y + + +++RA E + L+ + K+ + Sbjct: 292 -----LETQWDS----ELARLYAECAGSDPLRQIERAEAWLERHSSDASLLLALGKLCVN 342 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 +A + ++ + P L L Q+ + Sbjct: 343 GELWGKAQSYLEASLSVKPGYAAHLALGQLNEKLGQPE 380 >gi|115374609|ref|ZP_01461888.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1] gi|310819958|ref|YP_003952316.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115368375|gb|EAU67331.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1] gi|309393030|gb|ADO70489.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 442 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 86/225 (38%), Gaps = 7/225 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +++ A LE +L+ + + A +L R G L+ A++ KAL++ PD + Sbjct: 86 GEWDAAERGLEALLKTNPSLDPAWTNLGVIRERRGRLDQAEQAYRKALELKPDQEAAWDY 145 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + Y + L QK + +E RA L + + + A+ +A +L Sbjct: 146 LARLYCRTGRATNIEAELRQKLETRQEAISLRAAL----AFVLLHQQKLDAAATEAKRAL 201 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK--- 310 K+ + + A A+ + K A ++LE + P + ++ + Sbjct: 202 KVDERYVKAMQVLAQVYFLEKKYELARMVLENALAIAPRDAATHNAMGVVQLTLQERYLA 261 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L R ++ + E+ + E A + A+K A Sbjct: 262 LSSFKRAVQLRPDFAEARNNYGALLNEAQDYPAAVTELEAAVKSA 306 Score = 37.2 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 72/223 (32%), Gaps = 16/223 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A NI + Q+ L ++L Q L A E + A Sbjct: 156 ATNIEAELRQKLETRQEAISLRAALAFVLLHQQKLDA----AATEAKRALKVDER-YVKA 210 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L A+ AL I+P A+ + +E A++ + + Sbjct: 211 MQVLAQVYFLEKKYELARMVLENALAIAPRDAATHNAMGVVQLTLQERYLALSSFKRAVQ 270 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 ++ R + D A+ + ++K + + A + + + Sbjct: 271 LRPDFAEAR----NNYGALLNEAQDYPAAVTELEAAVKSASDFVPARLNLGNAYRGLGQF 326 Query: 277 RKAEVILEKIWKVNPHPE-----IANIYTHLLSE--NTVGKLK 312 +A+ E++ K+ P +A +Y L E +T+ + K Sbjct: 327 ARAKAEYEQVLKLQPSLADALFNLAILYLDLEPEGLDTLERFK 369 >gi|254247512|ref|ZP_04940833.1| hypothetical protein BCPG_02312 [Burkholderia cenocepacia PC184] gi|124872288|gb|EAY64004.1| hypothetical protein BCPG_02312 [Burkholderia cenocepacia PC184] Length = 395 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 124/393 (31%), Gaps = 13/393 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V + + S + + + L Sbjct: 3 LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K N Sbjct: 63 IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDA--NLG 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ A +Y + + P ++ + + D + A Sbjct: 121 AASLVGATAAHRMHEYAR-RDDWLSKVDAPEWQDARLLAAADMRADARDADGALAALADM 179 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--- 237 + ++ K W+ + L + + + + A+ L ++ EN Sbjct: 180 QAGGKRIH-AQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLRE 237 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + D A + S + AA+ L+ ++ +A I+E N + Sbjct: 238 RRHDPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLR 297 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + + +++A ++ + E + L + ++ + +A + A+K+A Sbjct: 298 RYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADN 357 Query: 358 K----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 + LA++ + ++ +SAL Sbjct: 358 EALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|114777735|ref|ZP_01452695.1| hypothetical protein SPV1_08706 [Mariprofundus ferrooxydans PV-1] gi|114551951|gb|EAU54485.1| hypothetical protein SPV1_08706 [Mariprofundus ferrooxydans PV-1] Length = 560 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 87/239 (36%), Gaps = 21/239 (8%) Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + + V + + G+ + + + + PD P + + + Sbjct: 11 RKRKIEQLLGVAG---RALQQGETEACESACGQLEALYPDHPDLLHLRGLLALQQGDVDA 67 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + L Q A RA LL + GD A+ ++L L I + Sbjct: 68 GLLQLKQAVAAAPT----RADLLASLGNGWFQAGDTQAAMECYRQALALDATDIATHLGM 123 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT--------HLLSENTVGKLKRALRLE 318 A +L++Q + +A V+LE+ K P + H L+ + + + Sbjct: 124 AGALMAQGELTEARVMLERARKRKP----GDAMVRMGLFQVCHALNLYSEAR-THLEAIL 178 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTD 376 + E+ + +ALE G++++ A++ P + +L+LA + + + + + Sbjct: 179 ARDAGHAEAHYGLGVLALEQGALEEVREHIHHALQANPYHADAWLVLADLRRFEAEDDE 237 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 3/159 (1%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +A + AR M ++ + +V + Q+ A Y+ A LE +L A Sbjct: 128 MAQGELTEARVMLERARKRK--PGDAMVRMGLFQVCHALNLYSEARTHLEAILARDAGHA 185 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A Y L + G L + + AL +P + E + Q Sbjct: 186 EAHYGLGVLALEQGALEEVREHIHHALQANPYHADAWLVLADLRRFEAE-DDETQAMQQV 244 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 ++ + R L A + D GD A++ E+ Sbjct: 245 YQHCPPGSDARMKLAFALAKVRDDLGDYAAAFELLQEAN 283 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 70/250 (28%), Gaps = 33/250 (13%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 A E L + AT + G+L A+ +A P V Sbjct: 96 AGDTQAAMECYRQALALDATDIATHLGMAGALMAQGELTEARVMLERARKRKPGDAMVRM 155 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + Q +S A T L + A + ++G + + Sbjct: 156 GLFQVCHALNLYSEARTHLEAILAR----DAGHAEAHYGLGVLALEQGALEEVREHIHHA 211 Query: 253 LKLCDNSIMASICAAKSLI--SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 L+ A + A +++ + +A +Y H + + Sbjct: 212 LQANPYHADAWLVLADLRRFEAEDDETQAMQ---------------QVYQHCPPGSDA-R 255 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 +K A L ++ + + A E+ A A A +A + + Sbjct: 256 MKLAFALAKVRDD-----LGDYAAAFELLQEANAIRHADNAFDTD------AAVAALAEI 304 Query: 371 NSHNTDKILY 380 + + +++ Sbjct: 305 TTLDGERMRE 314 >gi|224369359|ref|YP_002603523.1| TPR domain protein [Desulfobacterium autotrophicum HRM2] gi|223692076|gb|ACN15359.1| TPR domain protein [Desulfobacterium autotrophicum HRM2] Length = 762 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 75/256 (29%), Gaps = 31/256 (12%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 LA+ Y +L I +A+ + + A + ML + R A+ Sbjct: 418 GDLAQAEREISKVLKALPRHYNSNILLGNINMAKGESDKAAAIFKSMLTLDPKRPEALVG 477 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L D ++ Y +AL I+PD V V+ V K+ +A +++ K Sbjct: 478 LGRLFGIKRDNEASLSYFEQALAIAPDQMDVFSNVIAILVSQKKIDQAQERCDKRLKAEN 537 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 AIL ++ D + +++ I Sbjct: 538 ITPLTEAILFNIKANLYLTAKDFTKAEDFFKKAIASDPQFI------------------- 578 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 P ++ T + L + E +++ + E G Sbjct: 579 ------------QPYLSLTSLLKFQSRTDEAITEYKALIKKRPELAAPENLLATLFDEKG 626 Query: 340 SIDQAHAKAMLAMKIA 355 D A A++I Sbjct: 627 EFDLAETHYKRALEID 642 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 98/273 (35%), Gaps = 12/273 (4%) Query: 92 LMSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 +++ A + +++ N +L ++ A + + A +++ L+I Sbjct: 239 MLAGFYAGRQSFQQAEETFLKAIDLNPNHVKARMLLARLYNATGREDQAEAQMQKALEIE 298 Query: 151 ATREFAVYSLYFE--SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 AV + Y E + A+ + L+ P+ E + L K++ AI Sbjct: 299 P-ENVAVKNTYAEFYILHRKNKE-AETLVDEILEQRPNYSPARELKGKLLALKKDYDGAI 356 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + + + L+ +L +KG + + E+L+ + A A Sbjct: 357 SIFRDLVQEEPDSPKFN--FLLGSAL--LEKGKVDQAMASLSEALEKKPDFHQARYLYAT 412 Query: 269 SLISQNKKRKAEVILEKIWKVNP-H--PEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + +AE + K+ K P H I ++ + + ++ + Sbjct: 413 IHFKKGDLAQAEREISKVLKALPRHYNSNILLGNINMAKGESDKAAAIFKSMLTLDPKRP 472 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E+LV + ++ + + + A+ IAP + Sbjct: 473 EALVGLGRLFGIKRDNEASLSYFEQALAIAPDQ 505 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 19/240 (7%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 LYF DL++A++ +D P P + Y + + +A + Sbjct: 206 LYFFYLSQKDLDAAEKTLKALVDKKPGTPEPLIMLAGFYAGRQSFQQAEETFLKAIDLNP 265 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + R +L + G + ++L++ ++ A+ I K ++A Sbjct: 266 NHVKARMLL----ARLYNATGREDQAEAQMQKALEIEPENVAVKNTYAEFYILHRKNKEA 321 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSE---------NTVGKLKRALRLEEINKESVESLVI 330 E ++++I + P+ Y+ + G + L + +S + + Sbjct: 322 ETLVDEILEQRPN------YSPARELKGKLLALKKDYDGAISIFRDLVQEEPDSPKFNFL 375 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + LE G +DQA A A++ P L + + L A+P Sbjct: 376 LGSALLEKGKVDQAMASLSEALEKKPDFHQARYLYATIHFKKGDLAQAEREISKVLKALP 435 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 80/237 (33%), Gaps = 10/237 (4%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L L A ++ + Q+ + L A+R L+ Sbjct: 68 LLAMTYLNLGDGQEAFKEYLRLEQMEPGNVETLNRLAAFFLAGKKQPEAERRINTVLEKE 127 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P+ L +E T + + +K + LL L DK + Sbjct: 128 PNNIEARYLEAGLLALKRE--SVETLIERYQKILEIDPSQTKALLSLSRLYMVDK-KVDL 184 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIY 299 + ++L + + +SQ AE L+ + P PE +A Y Sbjct: 185 AGESIKKALSIEPENTQIYATLYFFYLSQKDLDAAEKTLKALVDKKPGTPEPLIMLAGFY 244 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + L+ ++N V++ ++++++ G DQA A+ A++I P Sbjct: 245 AG--RQSFQQAEETFLKAIDLNPNHVKARMLLARLYNATGREDQAEAQMQKALEIEP 299 >gi|238763106|ref|ZP_04624072.1| hypothetical protein ykris0001_40450 [Yersinia kristensenii ATCC 33638] gi|238698605|gb|EEP91356.1| hypothetical protein ykris0001_40450 [Yersinia kristensenii ATCC 33638] Length = 389 Score = 62.3 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 85/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESAALTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEKDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W+ AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMSL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAASADKRCARVSIMQGRVYLAKGEYAKGVEALEQVLEQDKEVVSEALPMLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPQAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|167947845|ref|ZP_02534919.1| protoheme IX synthesis HemY [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 413 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 109/314 (34%), Gaps = 15/314 (4%) Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124 S P L +R + KAL GL+ ++ + +A K V H L YL Sbjct: 29 IWSIPRGLSAWRGRRRNRRAQKALTQGLVELSEGHWKVAEK--QLVRYAHQSETPLLNYL 86 Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALD 182 + A + + L+ Q + AV L A T Sbjct: 87 AAARAAQLQGEDGRRDHYLQQAHQSMPMADVAV-GLTQAELQLAHQQYEQALATLTHLRS 145 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENAD 238 ++P +V + + Y +EW + L +K +A + + L+ R A Sbjct: 146 LAPKHVYVLRLLRRLYESQEEWQQLEALLPELRKRKVADAGDLDALELRLVEQRLQRVAQ 205 Query: 239 KGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 K H E SL+ I A ++ ++++ + E +L + + Sbjct: 206 KSGEEGLRHAWGELSASLRRRAELIGA---YSRLMLAEGRGELVESLLADALRSQWSESL 262 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ + + +L+ A +E L I++++ L+ +A + ++ I Sbjct: 263 LRLFGAIERGDPAQRLELAESWLRDRREDPLLLFILARLCLQNKLWGKARSYFEASIAIE 322 Query: 356 PRKEIFLLLAQIEQ 369 P + + L + + Sbjct: 323 PNADAYRELGALLE 336 >gi|30249415|ref|NP_841485.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30138778|emb|CAD85355.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 929 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 102/318 (32%), Gaps = 43/318 (13%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + + ++ L + + + + A E E ++ +L GD Sbjct: 367 ALKSVQQDPQLFALAGEAYMRSKDFTKASEYFEKAGELAPDNASLYTALAMSKMGQGDSK 426 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 SA +A + + +V ++ +E+ +A+ + + + +L Sbjct: 427 SAIADLEQAAQLDDQSGRAGVMLVLTHLQLREFDKALKAVESQLAEQPD----NPLLHNL 482 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---------------------- 269 + K D+ + ++L + + A A+ Sbjct: 483 KGGIYLGKKDLAKARSSFNQALSIQSDYFPAISNLARIDMQENHPEAAQQRFEDVLKRDK 542 Query: 270 ------------LISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRA 314 +++ K +A LEK + NP P + +L + L A Sbjct: 543 KNVQAMNALAGIALARGNKEEATGWLEKASRENPDELQPALQLGAHYLAVNDPGKSLALA 602 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSH 373 +L+ I+ +++ + ++++ L G D A P L LAQI + + Sbjct: 603 KKLQGIHPDNLSIVELLARSYLATGDKDAALENFQKLAARLPDSAPAQLQLAQIYSSMQN 662 Query: 374 NTDKILYWTQSALHAMPD 391 N + AL PD Sbjct: 663 NKAAA-GSLKKALTIKPD 679 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 88/296 (29%), Gaps = 35/296 (11%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L +LA ++ A E LQ A+ L S D+ SA ++ +A+ ++ Sbjct: 142 LRGNASLALGKFEEAKVLFEQALQDKPGFSDALTGLARYSLARNDIESAMNFSEEAVKLN 201 Query: 185 PDAPWVTEAVVQQYVLA-------KEWSRAITF--------------------LNQKKKN 217 P+ ++ +AI + + Sbjct: 202 PENSDAVLFRGDLLRAQNKIDEALADYDKAIKLNPESEAAYINRATISISTKKFEAAQAD 261 Query: 218 AKEWNRNRAILLIA---RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + L+A ++L + +G + L + + + A + + Sbjct: 262 LDAVRKIAPGSLLAAYTQALLDFSQGKHAVALETLQRILSSAPGHLPSVLLAGATQFALG 321 Query: 275 KKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A +E+ K P+ A L + + + ++ + + Sbjct: 322 SFPQAGQYVEQYLKAIPNNLYAIKLMASIQLKNNQVKQAITTLTPALKSVQQDPQLFALA 381 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + + +A A ++AP ++ LA + ++ + + A Sbjct: 382 GEAYMRSKDFTKASEYFEKAGELAPDNASLYTALAMSKMGQ-GDSKSAIADLEQAA 436 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 86/247 (34%), Gaps = 13/247 (5%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + + SQ + L++ L+ I L ++ A L I + A+ +L Sbjct: 461 KALKAVESQLAEQPDNPLLHNLKGGIYLGKKDLAKARSSFNQALSIQSDYFPAISNLARI 520 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + +AQ+ L A+ + A +L + + + Sbjct: 521 DMQENHPEAAQQRFEDVLKRDKKNVQAMNALAGIALARGNKEEATGWLEKASRENPD--- 577 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + D S A + + +++ A+S ++ K A Sbjct: 578 -ELQPALQLGAHYLAVNDPGKSLALAKKLQGIHPDNLSIVELLARSYLATGDKDAALENF 636 Query: 284 EKIWKVNP--HP---EIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALE 337 +K+ P P ++A IY+ + + LK+AL I + E+ ++ +++A+ Sbjct: 637 QKLAARLPDSAPAQLQLAQIYSSMQNNKAAAGSLKKALT---IKPDLWEAKLMQAQLAVA 693 Query: 338 MGSIDQA 344 ++ A Sbjct: 694 ADRVEDA 700 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 96/273 (35%), Gaps = 16/273 (5%) Query: 126 EVQIALAERQYNIA----HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 E + + A L+ P R L R GD+ SA++ KAL Sbjct: 42 EAKQYQQQGNDKAAIIQLKNALQQSPNDPEIRYL----LGTLYNREGDIQSAEKELNKAL 97 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 D+ D V + + ++ ++ + + K + + A LL R + G Sbjct: 98 DLGMDPVKVLPGLSRAWLGMGKFQQVLDE-TGKLSDKGNF----AELLALRGNASLALGK 152 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + ++L+ A A+ +++N A E+ K+NP A ++ Sbjct: 153 FEEAKVLFEQALQDKPGFSDALTGLARYSLARNDIESAMNFSEEAVKLNPENSDAVLFRG 212 Query: 302 --LLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L ++N + L + ++N ES + + + I++ + A A KIAP Sbjct: 213 DLLRAQNKIDEALADYDKAIKLNPESEAAYINRATISISTKKFEAAQADLDAVRKIAPGS 272 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + + L Q L + P Sbjct: 273 LLAAYTQALLDFSQGKHAVALETLQRILSSAPG 305 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 63/180 (35%), Gaps = 13/180 (7%) Query: 69 PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 L + + K + AL + A + + +++ + + Sbjct: 739 EKALSRQKNSQLLIKLHTALSQ------SGKEKQADQRLNQWLKEN--PTDAVTRTYLAG 790 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + LA ++Y+ A ++ + +L+ + +L + + D A YA KA +PD+P Sbjct: 791 VYLASKKYDPAIKEYQTILKQHPDHAATLNNLAWVYQQKKDP-VALEYAEKAYKQAPDSP 849 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + + + + R + L + E R ++ G+ + + Sbjct: 850 AILDTLGWILIEKGDAERGTSLLQKAVTAVPEAAEIRYH----YAVGLFKSGNKAEARQE 905 >gi|241205407|ref|YP_002976503.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859297|gb|ACS56964.1| FecR protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1237 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 89/263 (33%), Gaps = 18/263 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +A TG + N A ++ Q+ + L + Q+A E +E Sbjct: 349 QAYTTGFLK----NPHAALEIIKKAEQR-YPDDPTLPAV-RAQLAELTDDREQMKEAIER 402 Query: 146 MLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L P + + Y + D+N A +A++++P ++ Sbjct: 403 SLSLDPDHPMALSARASYK-AVYQSDVNGALADLNRAIELAPGGSGTLNSLGLLQSSR-- 459 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A + K A E + +L ++ D+G M + H+ ++ L + +A Sbjct: 460 --DANGEAEKAFKEAIELDPQDPLLRANLAILYLDQGRMKEAKHEIDTAIALDPSFDIAL 517 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEI 320 + + + ++ KA L NP + + ++ L + + Sbjct: 518 LARGRYYLQTGERDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRL 577 Query: 321 NKESVESLVIVSKIALEMGSIDQ 343 +K ++ + A+++ D Sbjct: 578 DKNDP--VISAFRTAVDIDDYDA 598 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 106/356 (29%), Gaps = 63/356 (17%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 +R + + AL + S A + + ++ T + V L++ IA +E++Y Sbjct: 238 ERRTTEDWLALAE-VQSAFDGRRAAAATLTNIRDRKLTAAQQARVDLIDATIAGSEKRYG 296 Query: 138 IAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT--EA 193 A + + L P R A Y YF A+ A A P A A Sbjct: 297 DAAKLFQKALPHLDPIRRNMAQYGGYF----------ARSLAEPAHAEQPPANTTGPYGA 346 Query: 194 VVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q Y K A+ + + ++ + A+ R+ D Sbjct: 347 IMQAYTTGFLKNPHAALEIIKKAEQRYPDDPTLPAV----RAQLAELTDDREQMKEAIER 402 Query: 252 SLKLCDNSIMASICAAKSLIS---QNKKRKAEVILEKIWKVNP----------------- 291 SL L + MA +A++ Q+ A L + ++ P Sbjct: 403 SLSLDPDHPMA--LSARASYKAVYQSDVNGALADLNRAIELAPGGSGTLNSLGLLQSSRD 460 Query: 292 -HPEIANIYTHLLSENTVGKLKRAL-------------------RLEEINKESVESLVIV 331 + E + + + L RA ++ +L+ Sbjct: 461 ANGEAEKAFKEAIELDPQDPLLRANLAILYLDQGRMKEAKHEIDTAIALDPSFDIALLAR 520 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + L+ G D+A + A P L+ + +A Sbjct: 521 GRYYLQTGERDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADR 576 >gi|157370890|ref|YP_001478879.1| tetratricopeptide repeat-containing protein [Serratia proteamaculans 568] gi|157322654|gb|ABV41751.1| Tetratricopeptide TPR_2 repeat protein [Serratia proteamaculans 568] Length = 389 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 31/259 (11%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSA-----QRYATKALDIS 184 + + A + +++ R AV L + G + A Q + IS Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGMYDRAEDMFGQLIGEEDFRIS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W +AI + K K+ R A +L+ D+ Sbjct: 143 -----ALQQLLVIHQATSDWQKAIDVAEKLVKLGKDKQRIEIAHFYCELALQAMGSDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVIL--EKIWKVNPHPEIAN 297 + + SI + ++Q + KA +L +K P + Sbjct: 198 KAMGLLKRAASADKQCARVSIMVGRIYMAQGEYAKAVESLTRVLNQDKELVSETLPMLHE 257 Query: 298 IYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y HL ++ LKR E N + + +++++I + D ++ P Sbjct: 258 CYQHLEQQQDWADFLKRC---VEENTGAT-AELMLAEIIEQNEGRDVVQVYINRQLQRHP 313 Query: 357 RKEI-FLLL----AQIEQA 370 + + L+ A E Sbjct: 314 TMRVFYRLMDYHLADAEDG 332 >gi|329119577|ref|ZP_08248259.1| HemY protein [Neisseria bacilliformis ATCC BAA-1200] gi|327464315|gb|EGF10618.1| HemY protein [Neisseria bacilliformis ATCC BAA-1200] Length = 400 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 117/376 (31%), Gaps = 12/376 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M L+ + + + + + + +V G L R + + L + + +L Sbjct: 1 MKALLWILILFAAAVGLSVASTMFSGNVYFQIGATLARVDLKLFVPALILAVVLFYILVQ 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-E 119 PA L R K L ++ A + + V + Sbjct: 61 FLGGLAGIPARLQRFGTSRRERKAGIGLNAAGLAYFEGRYQKAEQEAAKVLKNKEAGEIR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYAT 178 L ++ A + LE + ++PA R+ + Y + E + D +A+ Sbjct: 121 ALALMIAAHAADRMNDAELRGRYLEEIAELPADRQLSRYLMLAEDALNRCDYPAAESNLA 180 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ISP + ++ + + A+ + + N A + Sbjct: 181 AAAKISPRLTRLLRLQLRYAFDHGD-AEAVLAQTAELEKQHAANTGEAAQYRDWAYRRLL 239 Query: 239 KGDMIASYHDAIESLKLCDN-SIMASICA--AKSLISQNKKRKAEVILEKIWKVNPHPEI 295 G A LK + S+CA A+ + + A +EK + N P + Sbjct: 240 AGASDA--DGLKRVLKRIPDPLKSGSLCAAVAEKYENLGLYQSAAAWVEKYYPQNGQPAL 297 Query: 296 ANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +L + + A + + + LV + +A +A Sbjct: 298 LPPFVQSVAYLADKEQRKAVDAAEGWLQTRPKDADLLVSLGLLAYGKQLWGKAQGYLEAG 357 Query: 352 MKIAPRKEIFLLLAQI 367 + + L LA++ Sbjct: 358 IAERDTPQARLALAKV 373 >gi|209528250|ref|ZP_03276715.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209491322|gb|EDZ91712.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 594 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 8/179 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + L + Q + A + E +L+I T + L S R GDL A++ TKAL++ P Sbjct: 26 QAEAYLQQGQVDDARKACEQLLKIQPTSAVGLKILGDVSLRGGDLEGAKQNYTKALELQP 85 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + V + Y +++W +A + E+ A + + + Sbjct: 86 NWAEVYANLGSLYARSQQWEQAQAAYQKAISIKPEF----AGAYRNLAKVWTQLNRPLDA 141 Query: 246 YHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 ++ L +++ A A L+ Q +A+ + +N P +A Y +L Sbjct: 142 IRTQYKAYTLEPHTVSAQEHLALGDGLMQQGMAAEAQACYQNAINLN--PNLAAAYQNL 198 Score = 37.6 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 69/180 (38%), Gaps = 15/180 (8%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P P + + K+W +A++ + + + N A + +L+ G+M Sbjct: 281 RPVNPETVLQEAKAFCAMKKWEQAVSACQKALR--LDPNLAEAYKIQGNALQVL--GEME 336 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL- 302 A+ ++L++ +++ KA ++ + +P A +Y +L Sbjct: 337 AAVRSYNKALEVKPQFPEVHANLGSLYAQEDRLEKAVTCYQQA--IAQNPNFAGVYRNLA 394 Query: 303 -------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + L++A L E NK + E V + L G +DQA+ A+++ Sbjct: 395 KVLERLGREGDASICLEKAYTL-EPNKATPEDHVRLGNTRLGQGKLDQAYESYQRALELN 453 >gi|238757085|ref|ZP_04618273.1| hypothetical protein yaldo0001_17410 [Yersinia aldovae ATCC 35236] gi|238704915|gb|EEP97444.1| hypothetical protein yaldo0001_17410 [Yersinia aldovae ATCC 35236] Length = 389 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W+ AI + K KE R A +L+ D+ + Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKENQRLEIAHFYCELALQAMGSDDLDKATGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + I++ + K LE++ + P +++ Y HL Sbjct: 203 LKKAASADKQCARVSIMQGRVHIARGEYAKGVAALERVLEQDKEVVSEALPMLSDCYQHL 262 Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI- 360 E LKR E N + + +++++I + D A ++ P + Sbjct: 263 QQPEAWASFLKRC---VEDNTGAT-AELMLAEILEQQEGRDVAQTYINRQLQRHPTMRVF 318 Query: 361 FLLL----AQIEQA 370 + L+ A E+ Sbjct: 319 YRLMDYHLADAEEG 332 >gi|218885795|ref|YP_002435116.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756749|gb|ACL07648.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 883 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 24/297 (8%) Query: 99 NIPLARKM------------HSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKL 143 + AR+M + + + L + LA + A ++L Sbjct: 329 DHDAARRMVCSILLAQRRLDEAMQEARKLLDRNPGDANAHFLMAGVLLAGKDKRGAEKEL 388 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 E L A+ L G ++ A A+ +PD A+ ++ E Sbjct: 389 EAGLAQEPAHVGALLQLSTLKQSEGRMDEALADLRTAVVAAPDNIIARNALYAFHLGRGE 448 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 +A + + N A+L A+ G + ++ + A Sbjct: 449 TDKAEKVVLEGVNNTP----QDAVLYTMLVPLYANAGKEAKALDAVAKAHRADPAFADAY 504 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEI 320 + + + +A E V+P P LL T R R + Sbjct: 505 LAGLRVHAGAGRVEQALAESEAYLAVSPDSPGFLVASGALLDLLGRTTEADARFDR--AL 562 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + + +++V+ A G D+A A++ ++++ LA + + Sbjct: 563 ASKDRQVVLVVANRAAATGRTDKARQVLEAALQADNQEDLREALAVLLVRENKPDAA 619 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 89/271 (32%), Gaps = 15/271 (5%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +L E + + + A + L+ L +G ++ A+ K Sbjct: 29 FLSEGRKLMGQGNPAGAVVLFKNALEKDPGDYTLHLELGRAYYALGKIDLAENELQKCYR 88 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD- 241 P+ P + A+ + YV A +Q + +++ + +R L G Sbjct: 89 QQPNDPALNLALGEVYV-------ARNLPDQALVHVQKFEEHAGATAASRELAGLAYGQA 141 Query: 242 --MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + ++ L I A + + + + R A +L++ V P + A + Sbjct: 142 RRTEEARKALEQAFGLDPKRISARLALGRLFLYRGDLRAASAVLQEALAVGPD-DTAALA 200 Query: 300 TH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L T L ++ ++ + +V + L++G++ +A A Sbjct: 201 LQGDILLRQGETDKALSVFRKVTQLTPRDENARYMVGVLQLQLGNVAEAAQTAAAMRADF 260 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + LL A + + Q ++ Sbjct: 261 KDSALVFLLEGALAATRKDFAEAATLLQRSV 291 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 82/274 (29%), Gaps = 26/274 (9%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMM-LQIP 150 + A AR++ Q + E L LL E + + A + Q P Sbjct: 577 AAATGRTDKARQVLEAALQADNQEDLREALAVLLV-----RENKPDAALALYSSIEAQRP 631 Query: 151 ATREFAVYSLYFESCR-IGDLNSAQRYA-TKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 Y L R +A+ P Q I Sbjct: 632 REALIGRYRLLTHMRRNQEAAETARTLGLRDGGSSLPTMLEAYALERMQQREQG-----I 686 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L+ + + LL+A GD+ + ++LK+ + + + Sbjct: 687 QLLDAAYRQKGSTD-----LLLAMGGMLERGGDLARAEACYKDALKVQPDDVPTLLAMGT 741 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKE 323 + + K+ + EK ++ P +A Y + L+ AL+ + E Sbjct: 742 LQMRRKAYSKSVPVYEKALRLAPANVVAMNNLAMAYLQ-QNGRAQMALQLALQAYTHSPE 800 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E L + + G D+A A+ AP Sbjct: 801 NPEVLDTLGACMMANGRADEATRAYGRAVAAAPD 834 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 7/180 (3%) Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL + E A + L++ + ++ R + + K Sbjct: 699 TDLLLAMGGMLERGGDLARAEACYKDALKVQPDDVPTLLAMGTLQMRRKAYSKSVPVYEK 758 Query: 180 ALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 AL ++P + + A+ Q ++ E +L Sbjct: 759 ALRLAPANVVAMNNLAMAYLQQNGRAQMALQLALQAYTHSPENPE----VLDTLGACMMA 814 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 G + ++ ++ A++ +K KA L + PE A Sbjct: 815 NGRADEATRAYGRAVAAAPDNPTLRYHHAEAHFKAGRKDKAAEELRVALQTPDFPEAAQA 874 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 88/283 (31%), Gaps = 20/283 (7%) Query: 95 IAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 +A + +AR + + L R+ A + LE + Sbjct: 98 LALGEVYVARNLPDQALVHVQKFEEHAGATAASRELAGLAYGQARRTEEARKALEQAFGL 157 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 R A +L GDL +A +AL + PD + E +A++ Sbjct: 158 DPKRISARLALGRLFLYRGDLRAASAVLQEALAVGPDDTAALALQGDILLRQGETDKALS 217 Query: 210 FLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + ++ N + ++ L G++ + A +S + + Sbjct: 218 VFRKVTQLTPRDENARYMVGVLQLQL-----GNVAEAAQTAAAMRADFKDSALVFLLEGA 272 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKE 323 ++ +A +L++ + P Y L + L + + + Sbjct: 273 LAATRKDFAEAATLLQRSVALRP---SVEGYYKLGMALYAKGDLEMALSQFNTVLASTPD 329 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365 + +V I L +D+A +A + P L+A Sbjct: 330 HDAARRMVCSILLAQRRLDEAMQEARKLLDRNPGDANAHFLMA 372 Score = 36.8 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 10/231 (4%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D A +++ + P + + Y + A++ N + + + Sbjct: 274 AATRKDFAEAATLLQRSVALRPSVEGYYKLGMALYA-KGDLEMALSQFNTVLASTPDHDA 332 Query: 224 -NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R + I + D+ + +A + L A A L++ KR AE Sbjct: 333 ARRMVCSILLAQRRLDE-----AMQEARKLLDRNPGDANAHFLMAGVLLAGKDKRGAEKE 387 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMG 339 LE P A + L ++ L +++ + + L G Sbjct: 388 LEAGLAQEPAHVGALLQLSTLKQSEGRMDEALADLRTAVVAAPDNIIARNALYAFHLGRG 447 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 D+A + + P+ + + AN+ K L A A P Sbjct: 448 ETDKAEKVVLEGVNNTPQDAVLYTMLVPLYANAGKEAKALDAVAKAHRADP 498 >gi|116622427|ref|YP_824583.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225589|gb|ABJ84298.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 783 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 110/303 (36%), Gaps = 18/303 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A ++++ + ++ N+ L L + A ++L+ ++ + Sbjct: 338 GKRSDAAEVNAQILKEVPDDNDA--RGLSATFLLDKGDVAKALQELQAVVTRAPENPVSR 395 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L G+ A++ KA+++ PD A+ Q V E+ A+ + K Sbjct: 396 YNLGRAHAARGEWEQARQQFAKAIELRPDYVLARLALAQLQVTRGEFEAALKTAEEILKF 455 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIMASICAAKSLISQNK 275 + N N ++ A + GD +++ + + + A +NK Sbjct: 456 -DKGNVNARLIESAALMGQKKFGDSRVMLDAMLKTNPGSPDVLFQLGVVNLA-----ENK 509 Query: 276 KRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 ++AE + +++NP + + T++ T +K + + + L + Sbjct: 510 FKEAEDSFRRAYQLNPANSRGLMGIVETNMAQNKTEEAVKLLQAESDKSPNRTDLLTALG 569 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKE----IFLLLAQIEQANSHNTDKILYWTQSALHA 388 A+ G D A ++ + + I+L L + + I Q A + Sbjct: 570 NTAVRAGKYDFAIQTFNRVLEQTDKGKAQGDIYLRLGETYRRKGDLNGAIQA-LQKARES 628 Query: 389 MPD 391 +PD Sbjct: 629 LPD 631 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 17/275 (6%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 Y + V + + A + A +++ + +FA LY Sbjct: 174 EEYRRADSIKPGQQGVMMQLARALSARGDFAGAERLYRQVIEKDKSYQFAYTELYRIFLF 233 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 A+ +A +P + ++ Y + ++ LNQ K ++K+++ + Sbjct: 234 QNKPAQAEAMLKEAYQNNPKQ-YGFLTLLAMHYYGQQRRDDMVSVLNQIKSHSKDFD--Q 290 Query: 226 AILLIARSLENADKGDMI--ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA---- 279 A L + GD ++ K I + L+ Q K+ A Sbjct: 291 AYLTVGDFYLRMGDGDSAIREYKEGILKDPKKKLTYQKRVI---EVLMRQGKRSDAAEVN 347 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 IL+++ N ++ + L + L+ + E+ S + + G Sbjct: 348 AQILKEVPDDNDARGLSATFL-LDKGDVAKALQELQAVVTRAPENPVSRYNLGRAHAARG 406 Query: 340 SIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQAN 371 +QA + A+++ P + L Q+ + Sbjct: 407 EWEQARQQFAKAIELRPDYVLARLALAQLQVTRGE 441 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 61/162 (37%), Gaps = 7/162 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A + + + + + +V + A + A + E +++ A+ Sbjct: 613 GDLNGA--IQALQKARESLPDNIIVLSTLALVLDAASRRPEAKQVYEATIKLDPNNAVAL 670 Query: 158 YSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + + GDL+ A A +A + P+ +++ + Y+ + AI K Sbjct: 671 NNLAFMMAESGGDLDEALTKAQRAKQLLPNLFEISDTLGWIYLKKNLAANAIDIF----K 726 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + N + ++ + +GD + E+LK + Sbjct: 727 DLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPD 768 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 81/290 (27%), Gaps = 51/290 (17%) Query: 82 DKGYK---ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN---EYLVYLLEV--QIALAE 133 + Y+ A GLM I +A+ + + LL A+ Sbjct: 518 RRAYQLNPANSRGLMGIV--ETNMAQNKTEEAVKLLQAESDKSPNRTDLLTALGNTAVRA 575 Query: 134 RQYNIAHEKLEMMLQ-IPATREFA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +Y+ A + +L+ + + L R GDLN A + KA + PD Sbjct: 576 GKYDFAIQTFNRVLEQTDKGKAQGDIYLR-LGETYRRKGDLNGAIQALQKARESLPDNII 634 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHD 248 V + A A K + N A+ L + A+ G D+ + Sbjct: 635 VLSTLALVLDAASRRPEAKQVYEATIK----LDPNNAVALNNLAFMMAESGGDLDEALTK 690 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 A + +L N S + +N A I Sbjct: 691 AQRAKQLLPNLFEISDTLGWIYLKKNLAANAIDI-------------------------- 724 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L ++ + G +A + A+K P K Sbjct: 725 -----FKDLVNKQPNHSTYHYHLAMAYSQQGDKSKALEQLKEALKYNPDK 769 >gi|239814384|ref|YP_002943294.1| HemY domain protein [Variovorax paradoxus S110] gi|239800961|gb|ACS18028.1| HemY domain protein [Variovorax paradoxus S110] Length = 427 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 51/391 (13%), Positives = 99/391 (25%), Gaps = 39/391 (9%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + +++ W S ++L IL L S P ++ Sbjct: 23 NNQGTITVFWPPWRVDLSLNLVLVILLAAFVLLHLALRGLAALFSLPTQARQWRLQQKER 82 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ--------HTFHNEY----LVYLLEVQIA 130 + AL ++ + + ARK Q + L +LL + A Sbjct: 83 MLHSALLDAMVQLLSGRFSRARKAAQAALVQEKTLAALGASLPQSQQVRVLSHLLAAESA 142 Query: 131 LAERQYNIAHEKLEMMLQI---------PATRE-FAVYSLYFESCRIGDLNSAQRYATKA 180 A + L+ L P TRE + + + D A + Sbjct: 143 QALQDRPARDAHLQQALNESVERNVLASPETREGVQLRA-ARWALEDHDPAGALTRLEEL 201 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 ++ A+ K+ + ++ + E Sbjct: 202 PQGVQRRTLALRIRLKAARQDGRTLEALETARLLAKHRAFSDGAAQSIVRGLATELLSGA 261 Query: 241 DMIASYHDAIESLKLCDNSIM-ASICAA-KSLISQNKKRKAEVILEKIWK---VNPHPE- 294 A A L + + +I AA + + + A L W+ P Sbjct: 262 HDPAQLLRAWAELDAAEREMPEVAIHAAQRMVALRGDLSLARGWLLPAWERMVSQPRGLG 321 Query: 295 ------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +A L L R + N + ++ +A Sbjct: 322 DTLRVKMARALEAGLDSVDADWLARIETAQRNNPRDPNLQYLAGMACMKRQLWGKAQQLL 381 Query: 349 MLA----MKIAPRKEIFLLLAQIEQANSHNT 375 M A + +L LA++ + Sbjct: 382 MQAGLGLQDTELYRRAWLALAELAETRGDEE 412 >gi|148658023|ref|YP_001278228.1| hypothetical protein RoseRS_3925 [Roseiflexus sp. RS-1] gi|148570133|gb|ABQ92278.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1] Length = 1180 Score = 61.9 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 85/283 (30%), Gaps = 13/283 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 L + + A + ++ + E L L IAL + A ++ LQ Sbjct: 865 ALAYLGVGRLDAAYESARRALERRNVYPEALALL--GDIALQRGKLAEAEQQYRAALQQN 922 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + A L + G+ + A + A+ P +P + + + + AI Sbjct: 923 PSLAAAHIGLGRVAATGGNWSIAAGHFLNAVQGEPQSPDALLWLGEARLRTADIDGAIAA 982 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 ++ + + G + + +A +L+L A++ K Sbjct: 983 YSEALHLRDNFPE----AYFGLAQAEYGAGRIEDALRNATRALELRPRYAEAALLLGKIY 1038 Query: 271 ISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 Q +A ++ +NP P + ++ + ++ E+ Sbjct: 1039 ERQGYSMRALEAYKRAIDINPRLAEPHYRRALLLIRADRLNEAREELEVATRLDPNFAEA 1098 Query: 328 LVIVSKIALEMGSIDQA----HAKAMLAMKIAPRKEIFLLLAQ 366 + ++ +I A P + LA+ Sbjct: 1099 HYWLGRVYFAQRNIQAALNRFREAVNRQGGAYPEARYYQGLAE 1141 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 37/257 (14%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +YN A E + Y +G L++A A +AL+ P + Sbjct: 839 EYNAAVMAYERAIAQQPASATLRYGAALAYLGVGRLDAAYESARRALERRNVYPEALALL 898 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK--------------------------------EWN 222 + + + A + E Sbjct: 899 GDIALQRGKLAEAEQQYRAALQQNPSLAAAHIGLGRVAATGGNWSIAAGHFLNAVQGEPQ 958 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A+L + + D+ + E+L L DN A A++ + A Sbjct: 959 SPDALLWLGEAR--LRTADIDGAIAAYSEALHLRDNFPEAYFGLAQAEYGAGRIEDALRN 1016 Query: 283 LEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + ++ P A + + ++ L+ R +IN E + + + Sbjct: 1017 ATRALELRPRYAEAALLLGKIYERQGYSMRALEAYKRAIDINPRLAEPHYRRALLLIRAD 1076 Query: 340 SIDQAHAKAMLAMKIAP 356 +++A + +A ++ P Sbjct: 1077 RLNEAREELEVATRLDP 1093 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 8/160 (5%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSL-YFESCRIGDLNSAQRYATKA 180 L+ Y+ A + + + PA R + +L GD + +A Sbjct: 238 RLVRALADYKRGAYSNAIATFDELERDYPALRPGLLRTLRAVIWWARGDYEQSVGEFQRA 297 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + PDA A + + A ++ + N+ ++ + +L + +LE Sbjct: 298 IAAMPDASPAELARLYASLGAVQYDMGDPASRESFNRAIALLQDQD--LGVLRYSLALEE 355 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 GD + ++ +L S + A++ + Sbjct: 356 LRAGDPADAAVSLEQARRLLPPSTPLLVTLARAYRLDGQL 395 >gi|300312067|ref|YP_003776159.1| tetratricopeptide TPR_4 containing protein [Herbaspirillum seropedicae SmR1] gi|300074852|gb|ADJ64251.1| tetratricopeptide TPR_4 containing protein [Herbaspirillum seropedicae SmR1] Length = 924 Score = 61.9 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 96/286 (33%), Gaps = 9/286 (3%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 + + Q + + L L + A E LQ A A+ L + Sbjct: 116 QFAKALEQTAALPAQGEIAALRGNAYLGLGKSAEAKAAFETALQSDAKLPTALIGLARSA 175 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 L++A RYA +A+ +PD V A L Q K + Sbjct: 176 LLERKLDTATRYADEAIAKNPDNNEVLMFKAHLLSSQGATDEAAAVLGQVIKRKPD---- 231 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L+AR+ + + D + K +++A+ + SQ K A ++ Sbjct: 232 QVDALLARADLEIRQRQFAQAEADIQAAQKAKPKNLLATYMQSLLAFSQGKHADALTEIQ 291 Query: 285 KIWKVN----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K+ P +A + L +L L+++ + + +++ L+ G Sbjct: 292 KVQAGAPDYMPAALLAGAIQYALGSMPQAELSLGKYLDKV-PDDNYARKLLASAQLKNGQ 350 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A A A+K + L LA + + K + + A Sbjct: 351 KAKAAATLEPALKSGQQDAELLALAGEIAIENKDFAKAADYYEKAS 396 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 72/241 (29%), Gaps = 41/241 (17%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 +V L+ + LA+ Y A + E L I + A +L + A++ Sbjct: 471 PIVQNLKGGVYLAQNDYANARKAFEKALAIDPSFFAATANLAQLDLKDNQPELARKRFE- 529 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L KK+ + A + Sbjct: 530 -----------------------------AVLATDKKSIP--------AMTALATLAERN 552 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G + ++ S+ AS + ++K K + K+ NP +A Sbjct: 553 GHPQEATQWLERAVNENPESVQASAQLIARYLLTDQKEKGLTMARKLQASNPGDAVALEM 612 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 S +T G L RL + +S + + ++ + + A A A++I P Sbjct: 613 LGQAQFASGDTQGALASYQRLATLQPDSAPTQLRLASLYQSAKDVQGAADAARKALEIQP 672 Query: 357 R 357 Sbjct: 673 D 673 Score = 36.8 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 12/216 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + GD +A+ AL + + Q Y+ + A L + + Sbjct: 41 RQYQQKGDSAAAEIQLKNALQKDGENAQARLMLGQIYLANGNAASAEKELRRALSLGIKP 100 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L + L+ + A+E + + + K +A+ Sbjct: 101 EQVVPALTQSLLLQ--------GQFAKALEQTAALPAQGEIAALRGNAYLGLGKSAEAKA 152 Query: 282 ILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E + + P I + LL + A N ++ E L+ + + Sbjct: 153 AFETALQSDAKLPTALIGLARSALLERKLDTATRYADEAIAKNPDNNEVLMFKAHLLSSQ 212 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSH 373 G+ D+A A +K P + LL A +E Sbjct: 213 GATDEAAAVLGQVIKRKPDQVDALLARADLEIRQRQ 248 >gi|153820259|ref|ZP_01972926.1| hemY protein [Vibrio cholerae NCTC 8457] gi|126509193|gb|EAZ71787.1| hemY protein [Vibrio cholerae NCTC 8457] Length = 341 Score = 61.9 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 92/308 (29%), Gaps = 16/308 (5%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 + R + + G++ + + A K + + H L YL+ + A Sbjct: 17 NWFSVRKQRRSRRYTNEGIIKLLEGDWTQAEKKVTRWANHH--DMPLLCYLVASEAANGM 74 Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVT 191 ++ + AV L + GD +A T+ P V Sbjct: 75 GDRAK-RDRYLALAAQQNNSTLAVE-LTRAKQQLGDGDNQAALETLTQLQRNHPHNTVVL 132 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-----KGDMIASY 246 + Q Y EW + L + K + N L I KG Sbjct: 133 NLLKQCYQALGEWQPLLALLPKLVKAKRLSNEEAQQLEITAQRGILQDIASPKGSEGLMQ 192 Query: 247 HDAIESLKLC--DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 H A S KL +M I LI + +A ++++ K PE+ + L Sbjct: 193 HWAQLSRKLKAEPELLMCFIT---QLIQRKADYEAFSMIKESLKKQATPELYALLPELNI 249 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + + + + E+ + ++ L A A+ + + L Sbjct: 250 SDRHPLIALLQEALRRDGNNAEAHSALGQLYLREKHWADAQKHLEKALSLRSSVSDYAYL 309 Query: 365 AQIEQANS 372 A + + Sbjct: 310 ADALEKQN 317 >gi|119947241|ref|YP_944921.1| HemY domain-containing protein [Psychromonas ingrahamii 37] gi|119865845|gb|ABM05322.1| HemY domain protein [Psychromonas ingrahamii 37] Length = 396 Score = 61.9 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 63/383 (16%), Positives = 127/383 (33%), Gaps = 49/383 (12%) Query: 21 VSHYPEDVSITWGNRL-YRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 +S + I+ N Y T+ L F F L+ + R LS ++ +R Sbjct: 21 ISSNKGYILISLDNYTTYETTIINALIATVVFYFLLGLIEWILRKLLSMSSITRGWFGQR 80 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 K + G++++ N A+K+ S +++ L Y+ A + Y + Sbjct: 81 KTRKAQRNSLLGMLALLEGNSRQAQKLLSKSAEKTAA--PALTYIAAANAAQQQGDYALR 138 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA--TKALDISPDAPWVTEAVVQQ 197 L+ + AV L + +I A + P + + + Sbjct: 139 DSYLQQATKSQKGCNLAV-GLVWIELQIEAKQFADALIKLKELDSTFPGNKRIAKLYLDI 197 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLENA--DKGD 241 Y +W+ I L +++K + + L +L+ DK Sbjct: 198 YPPLNQWADYIEVLIKQRKYLSLVDTEFEAIKLNAYQHLFKQLALQSGEALQALWNDKSS 257 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSL----ISQNKKRKAEVILEKIWKVNPHPEIAN 297 A +S L + K +K L++ + V Sbjct: 258 RSMRKDVAYQSAMLD------AFIEGKYYEFAEYFLGEK------LKEHFNV-------T 298 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAHAKAMLAMKI 354 + ++ + K L LE+ K+ E+ ++K+ L + A +++ Sbjct: 299 LLAYVDKIKIMDNNKLILILEKQLKKDPENGAIHHALAKLKLNEDNESAAIEHLQKGVEL 358 Query: 355 APRKEIFLLLAQI-EQANSHNTD 376 P + F LLA+I E+A+ + Sbjct: 359 DPNVDDFALLAKILEKADRLDEA 381 >gi|123442240|ref|YP_001006221.1| tetratricopeptide repeat protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089201|emb|CAL12047.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 389 Score = 61.9 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W+ AI + K KE R A +L+ D+ + Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKENQRLEIAHFYCELALQAMGSDDLDKAMSL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAASADKQCARVSIMQGRVHLAKGEYGKGVEALERVLEQDKEVVSEALPMLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|213425398|ref|ZP_03358148.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 246 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 17/232 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ S + + YLL + A A+ Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRGDEARAN 139 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ K L+++P P V Sbjct: 140 QHLERAAELAGNDTIPVEITRV-------RLQLARNENHAARHGVDKLLEVTPRHPEVLR 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 Q Y+ WS + + K +RA+L + D+ Sbjct: 193 LAEQAYIRTSAWSSLLDIIPSMAKAHVGDEAHRAMLEQQAWIGLMDQARAEQ 244 >gi|332161861|ref|YP_004298438.1| tetratricopeptide repeat protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605627|emb|CBY27125.1| heat shock (predicted periplasmic) protein YciM,precursor [Yersinia enterocolitica subsp. palearctica Y11] gi|325666091|gb|ADZ42735.1| tetratricopeptide repeat protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 389 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W+ AI + K KE R A +L+ D+ + Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKLGKENQRLEIAHFYCELALQAMGSDDLDKAMSL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAASADKQCARVSIMQGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|238794721|ref|ZP_04638325.1| hypothetical protein yinte0001_18250 [Yersinia intermedia ATCC 29909] gi|238725952|gb|EEQ17502.1| hypothetical protein yinte0001_18250 [Yersinia intermedia ATCC 29909] Length = 389 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 86/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W+ AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLEKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + I++ + K LE++ + P +++ Y HL Sbjct: 203 LKKAAAADKQCARVSIMRGRVHIAKGEYAKGVEALERVLEQDKEVVSEALPMLSDCYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|33597225|ref|NP_884868.1| hypothetical protein BPP2645 [Bordetella parapertussis 12822] gi|33601071|ref|NP_888631.1| hypothetical protein BB2088 [Bordetella bronchiseptica RB50] gi|33573652|emb|CAE37937.1| putative exported protein [Bordetella parapertussis] gi|33575506|emb|CAE32584.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 531 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 44/378 (11%), Positives = 103/378 (27%), Gaps = 18/378 (4%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 + +V + S + + +L + + + ++ P L +R ++ Sbjct: 24 HAGNVLLLVWPWRIELSLTLTVLLLVAAFVTLYIGLRLLAWLVAIPDRLRAWRGRRAQER 83 Query: 84 GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 ++ L G + + A K + Q L L + A +Y ++ Sbjct: 84 DHELLERGWIGLLEGRFAQAEKDLSKLFDQTKVRSRRVLAALSGARAAHNLGEYER-RDR 142 Query: 143 LEMMLQIPATREFAVYSLYFES---------CRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + + E+ G A D Sbjct: 143 MLESAREQAGEDAGL----QEATATVSADMLLDQGRAQQALDLLEPLQDGGARHLHTMRL 198 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ + R + L+ + G + + + L Sbjct: 199 LLRAETALQHHERVFMLARGLLRRNAIGKAEAEQLIDSAGAARLRAGMAVDQWRPIWKDL 258 Query: 254 KLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 K + + ++ A + + +A ILE V +P + Y + +L Sbjct: 259 KSDERLLPNIALAGAAAFEDAGEASEAARILEAAVAVKFNPALVAAYARCDAAQVPHRLA 318 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 +A + + L + + L QA ++ + LL + Sbjct: 319 KAETWLQQRPADTDLLTALGLLCLNGQLWGQAERYLQRSVSRRNDPQAHALLGSLYDRLD 378 Query: 373 HNTDKILYWTQSALHAMP 390 D +W A Sbjct: 379 RPADAARHW--RQATAAR 394 >gi|42519019|ref|NP_964949.1| hypothetical protein LJ1093 [Lactobacillus johnsonii NCC 533] gi|41583306|gb|AAS08915.1| hypothetical protein LJ_1093 [Lactobacillus johnsonii NCC 533] Length = 434 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 10/253 (3%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A + Sbjct: 76 FPKEDLFKVYLAEILLNDGDEDDGLQLLYDVKPDSDAYLESLLDLADYYQSNGLIETAHQ 135 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A ++PD + + + L+ ++S A+ + KN K + ++L R Sbjct: 136 KLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFGE---VVLSQRIAA 192 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 K + I+S + SI A A ++S N + A L+++ + P Sbjct: 193 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 252 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 253 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 310 Query: 351 AMKIAPRKEIFLL 363 +++AP L Sbjct: 311 GLEVAPDNSDLRL 323 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 69/191 (36%), Gaps = 15/191 (7%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + +E + ++ Y+ A + + + T + S R Sbjct: 135 QKLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT-----FGEVVLSQR 189 Query: 167 IGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE 220 I + +A + +A+ + + A + AI +L+Q + + Sbjct: 190 IAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPD 249 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +L A + E+ ++ +++ + + +L + AK+ + N+ +AE Sbjct: 250 YVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLDEAE 305 Query: 281 VILEKIWKVNP 291 +L+K +V P Sbjct: 306 RLLKKGLEVAP 316 >gi|332707691|ref|ZP_08427719.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L] gi|332353600|gb|EGJ33112.1| hypothetical protein LYNGBM3L_54490 [Lyngbya majuscula 3L] Length = 463 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 88/262 (33%), Gaps = 9/262 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + P A + + L L + + +A E+ ++ + + T A Y Sbjct: 62 DFPGAERAFR--KALEFDPYMAMGRYLLANTYLQQGKNQLALEQYQIAIALDPTLSQAYY 119 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L + G +SA +AL +P++ + + AI + Sbjct: 120 NLGIAFYKEGAPDSAIAAYRQALSFNPESADIYYNLGLALESQGNQEEAIEHYQATIRLD 179 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ + L ++ + + ++++ + A L+ Q +K Sbjct: 180 PDYGK----AYYNMGLILVEQDQIGPATTALRQAVRTQPKLVKAHYQLGLLLVEQGEKSA 235 Query: 279 AEVILEKIWKVNP--HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 AE + KV+P P + L + R + E+ E+V++ + Sbjct: 236 AEESFREAVKVDPKLAPAQYQLAVILFEKGELAEAITRFRLVTELEPENVDAYRQLGAAL 295 Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357 G +A LA+++ P Sbjct: 296 TANGEYAEAVTTLKLAVQLDPY 317 >gi|268589508|ref|ZP_06123729.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131] gi|291315177|gb|EFE55630.1| tetratricopeptide repeat protein [Providencia rettgeri DSM 1131] Length = 390 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 106/337 (31%), Gaps = 55/337 (16%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S +F L + +A Y+ A + + Sbjct: 84 GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMAAGVYDRAENMFQQLTDEVD---- 139 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + +S ++++ Y L +W++AI + Sbjct: 140 -----FKQS-------------------------ALQSLLNIYQLTSDWTKAIETAGKLV 169 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K R + A + + D+ + ++ + ++ SI + I Q Sbjct: 170 KLGHTELREQIAHFYCELATQQLASDDLEDALIFLNKAEQADNHCARVSIMKGRLFIEQG 229 Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 KA +L+++++ P + + Y H + + N ++ + Sbjct: 230 NYDKAIHVLKQVYEQDRELVAETLPLLFDCYQHTGQADEWE--DYLRQCVAGNSGAI-AE 286 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL-AQIEQANSHNTDKILYWTQSAL 386 + ++ I +E + + A ++ P + + L+ +E+A + L + + Sbjct: 287 LYLADIIVEKQNHEAAANYINDQIQRHPTMRLFYRLMDYHLEEAEDGRAKESLILLRKMV 346 Query: 387 -HAMP-DPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + P + +S W P ++ Sbjct: 347 GEQIRTKPDYRCHKCGFTSRALYWH--CPSCRSWDTI 381 >gi|322432943|ref|YP_004210192.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9] gi|321165170|gb|ADW70874.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] Length = 663 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 98/322 (30%), Gaps = 36/322 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATR 153 N A K + + + + L ++ LA + A + +L P Sbjct: 82 GNTLEAIKGYERAISLNPADADSIELL--AKLLLASGTKDEALKLYRQLLSLCPDRPDVY 139 Query: 154 E-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 E D +++ +A PD P + ++ + +AI Sbjct: 140 FNLGH---LLEF--DDDKDASLNIYREAARRFPDNPDAHFNLARKLKAEGQTQQAINSFE 194 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + A G+ + + ++K + +A L+ Sbjct: 195 NVLLLKPD----DAETFNYLGTLFHLLGETDKAKESYLLAIKHKPDYPLALCNLGALLMD 250 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVES 327 + + AE++L K +++ P++ Y +L NTV ++ ++ + + E+ Sbjct: 251 FGQWQVAEMMLRKAIELD--PDLLAAYCNLGSVLAQQGNTVAAIEALRQVLQRDPAHAEA 308 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP-------RKEIFLLLAQIEQANSHNTDKILY 380 L + +G A LA+K P L A A ++ Sbjct: 309 LCTLGNTMNNLGDEAGAMKCFHLALKANPGHALTRFNMSTLTL-AAGNFAEGWPDYELR- 366 Query: 381 WTQSAL----HAMPDPLWISDD 398 W + P W +D Sbjct: 367 WQVRESSRNERHLTQPRWTGED 388 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 111/320 (34%), Gaps = 29/320 (9%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 L TGL A + A ++ + + + H + L L +A +++ ++ Sbjct: 2 DLLQTGLAHHRAGRLSDASHCYTALLRLNPAHADALN--LSGVLARQRGDLSVSERFIKK 59 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + + + L G+ A + +A+ ++P E + + + + Sbjct: 60 AIHQSPSVATYHHHLAKTHTHQGNTLEAIKGYERAISLNPADADSIELLAKLLLASGTKD 119 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ Q + R + LE D D AS + E+ + ++ A Sbjct: 120 EALKLYRQLLSLCPD--RPDVYFNLGHLLEFDDDKD--ASLNIYREAARRFPDNPDAHFN 175 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------THLLSENTVGKLKRALRLE- 318 A+ L ++ + ++A E + + P+ A + HLL E K K + L Sbjct: 176 LARKLKAEGQTQQAINSFENVLLLK--PDDAETFNYLGTLFHLLGET--DKAKESYLLAI 231 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI-----EQANSH 373 + + +L + + ++ G A A+++ P LLA A Sbjct: 232 KHKPDYPLALCNLGALLMDFGQWQVAEMMLRKAIELDPD-----LLAAYCNLGSVLAQQG 286 Query: 374 NTDKILYWTQSALHAMPDPL 393 NT + + L DP Sbjct: 287 NTVAAIEALRQVLQ--RDPA 304 >gi|298530866|ref|ZP_07018268.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510240|gb|EFI34144.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] Length = 644 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 11/203 (5%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 Y E+ + D A++ A K L +P + + + + + + A+ L Q Sbjct: 12 YAEALKKKDFARAEKIARKLLKKNPGDGRMLKYLGTVQAIQGKNAEALPRLEQAAGLLP- 70 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 A LL + G + ++ L + +S + A +A Sbjct: 71 ---GDAELLKNLAQNLEAMGRDEEAARRYLQMLDISPDSPSIHVRLAAIFGRAKNLHQAR 127 Query: 281 VILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 + +++PH ++A + L +L ++ +N E + + + Sbjct: 128 DHARRASELDPHNWDALMKLARAHHELEEPQKAKRL--YQKVLTMNPEHPPAYSSLGSVC 185 Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358 E+ + ++A A+++ P Sbjct: 186 RELNNPEEAREHLQRALELEPDS 208 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 98/284 (34%), Gaps = 41/284 (14%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 + L K+N G Y G + A + E L L Q Sbjct: 25 EKIARKLLKKNPGDGRMLKYLGTVQAIQGKNAEALPRLEQAAGLLPGDAELLKNL--AQN 82 Query: 130 ALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + A + ML I P + V L R +L+ A+ +A +A ++ P Sbjct: 83 LEAMGRDEEAARRYLQMLDISPDSPSIHVR-LAAIFGRAKNLHQARDHARRASELDP-HN 140 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDM 242 W +A+++ +RA L + +K + + + + + + + Sbjct: 141 W--DALMKL-------ARAHHELEEPQKAKRLYQKVLTMNPEHPPAYSSLGSVCRELNNP 191 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-------IWKVNPHPE- 294 + +L+L +S A K + E+ +++PH E Sbjct: 192 EEAREHLQRALELEPDS-------ALHHTRMGSVCKDLKLYEEARDHYLRALEIDPHFEH 244 Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + N Y HL + LK R E++ +SV++ +S++ Sbjct: 245 AHSRLGNAYKHLGQIS--DALKSYRRALELDPDSVQAHYGLSEL 286 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 88/243 (36%), Gaps = 22/243 (9%) Query: 125 LEVQI-ALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L AL ++ + A + +L+ R ++ + G A +A Sbjct: 9 LNAYAEALKKKDFARAEKIARKLLKKNPGDGRMLKYLG-TVQAIQ-GKNAEALPRLEQAA 66 Query: 182 DISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADK 239 + P + + + Q + ++ A +L R + R+ Sbjct: 67 GLLPGDAELLKNLAQNLEAMGRDEEAARRYLQMLDISPDSPSIHVRLAAIFGRAKNLH-- 124 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----E 294 + A + +L ++ A + A++ + +KA+ + +K+ +NP HP Sbjct: 125 ----QARDHARRASELDPHNWDALMKLARAHHELEEPQKAKRLYQKVLTMNPEHPPAYSS 180 Query: 295 IANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + ++ L E L+RAL LE +S + + ++ ++A + A++ Sbjct: 181 LGSVCRELNNPEEAREHLQRALELE---PDSALHHTRMGSVCKDLKLYEEARDHYLRALE 237 Query: 354 IAP 356 I P Sbjct: 238 IDP 240 >gi|238798368|ref|ZP_04641850.1| hypothetical protein ymoll0001_19470 [Yersinia mollaretii ATCC 43969] gi|238717753|gb|EEQ09587.1| hypothetical protein ymoll0001_19470 [Yersinia mollaretii ATCC 43969] Length = 389 Score = 61.5 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 85/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGFYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ Y +W+ AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLVIYQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + I++ + K LE++ + P + + Y HL Sbjct: 203 LKKAASADKQCARVSIMLGRVHIAKGEYAKGVEALERVLEQDKEVVSEALPMLNDCYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPEAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|124024101|ref|YP_001018408.1| hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT 9303] gi|123964387|gb|ABM79143.1| Hypothetical protein P9303_24101 [Prochlorococcus marinus str. MIT 9303] Length = 725 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 23/304 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR 153 A ++ ++ + L +I Q+ A + L+ P T Sbjct: 54 GQHQQAVELIQASIREDESNPIPFFNL--GKILAIAGQHENAVGVFQEALKRNQQIPETW 111 Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + R G A++ AL ++P + E A Sbjct: 112 FC-----FANALREIGKTEEAKQAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEQLFV 166 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + R I A+K + A+ +L L S A +L Sbjct: 167 KAVDQYPNNVNLR----INYGRLLAEKAEHAAAIMQYQIALPLAPQSPELHYNFANALKE 222 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVES 327 + +A K +V P+ A+ Y L + + + E+ + ++ Sbjct: 223 EGDVEEAIASYRKAIEVK--PDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADA 280 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + E G +++A A A+++ P + + ++ + + A+ Sbjct: 281 YFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIE 340 Query: 388 AMPD 391 PD Sbjct: 341 VKPD 344 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 12/201 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + + +Y AL ++P +P + + AI + + ++ Sbjct: 185 LLAEKAEHAAAIMQY-QIALPLAPQSPELHYNFANALKEEGDVEEAIASYRKAIEVKPDF 243 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A A L ++GD+ + +++++ + A + + +A Sbjct: 244 ----ADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIA 299 Query: 282 ILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 K +V P+ A+ Y L + + + E+ + ++ + + Sbjct: 300 SYRKAIEVK--PDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYFALGLVMK 357 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 E G +++A A A+++ P Sbjct: 358 EEGDVEEAIASYRKAIEVKPD 378 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 53/153 (34%), Gaps = 4/153 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 E A +++ A ++L GD+ A KA+++ PD Sbjct: 257 EGDVEEAIASYRKAIEVKPDFADAYFALGLVMKEEGDVEEAIASYRKAIEVKPDFADAYF 316 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ + AI + + ++ A A L ++GD+ + ++ Sbjct: 317 ALGLVMKEEGDVEEAIASYRKAIEVKPDF----ADAYFALGLVMKEEGDVEEAIASYRKA 372 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +++ + A + L + + +A I+ Sbjct: 373 IEVKPDFADAYLNLGNVLKEEGEIDEARQIITT 405 >gi|289548835|ref|YP_003473823.1| hypothetical protein Thal_1064 [Thermocrinis albus DSM 14484] gi|289182452|gb|ADC89696.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM 14484] Length = 538 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 46/287 (16%), Positives = 105/287 (36%), Gaps = 21/287 (7%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L Y L ++ +A+ A E LE L++ T E +L G+L+ A+ Sbjct: 143 PQNPLPYYLLARLYMAQGDQKKAIEYLEKSLRVKPTFEAGFITLGGLYESRGELSKAETL 202 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARS 233 L+ P+ E + Y + W A +K + + A++LI ++ Sbjct: 203 YKSILEKDPNNRVALERLASLYASSGRWEEAKET-YRKLIDLYPDSGYQYQYALVLI-KA 260 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH- 292 + + +++ K D+ + L + +A+ + E++ + +P+ Sbjct: 261 SQYEEALQVLSELRQ-----KNKDDLQ-VNFTYGVVLELLKRTEEAKKVYEELLQKDPNN 314 Query: 293 ----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +A +Y L + A ++ +I+ + L++++ + E + A Sbjct: 315 VRIMERLAGVYADLGDYTKAE--ETAQKVLKIDPSNYNMLLLMAHLLSETNRLQDAFLYV 372 Query: 349 MLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393 A +I P ++ + A + + + A+ DP Sbjct: 373 QKAKEINPNDYRVYFVTAILLDKEGKYLEAEKN-LRKAIELNPEDPD 418 Score = 60.7 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 98/275 (35%), Gaps = 13/275 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A M + + + LL + QY+ A L+ + ++ Sbjct: 92 GEQHKA--MSALEEGYRVVPDSPQILLLLADEYMRRSQYDKATPLLQRLSELNPQNPLPY 149 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y L GD A Y K+L + P + Y E S+A L + Sbjct: 150 YLLARLYMAQGDQKKAIEYLEKSLRVKPTFEAGFITLGGLYESRGELSKA-ETLYKSILE 208 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 NR + L + A G + + + L +S A LI ++ Sbjct: 209 KDPNNR---VALERLASLYASSGRWEEAKETYRKLIDLYPDSG-YQYQYALVLIKASQYE 264 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR----LEEINKESVESLVIVSK 333 +A +L ++ + N ++ +T+ + + + + A + L + + +V + ++ Sbjct: 265 EALQVLSELRQKNKD-DLQVNFTYGVVLELLKRTEEAKKVYEELLQKDPNNVRIMERLAG 323 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQI 367 + ++G +A A +KI P + LL+A + Sbjct: 324 VYADLGDYTKAEETAQKVLKIDPSNYNMLLLMAHL 358 Score = 60.3 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 71/201 (35%), Gaps = 9/201 (4%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + A + A + P P + Y + E +A++ L + + + Sbjct: 52 RLAILQKKYDRALQLALEFRKQYPKLPEAYLTLHSVYSVRGEQHKAMSALEEGYRVVPDS 111 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + +L+ + E + + +L + + A+ ++Q ++KA Sbjct: 112 PQ----ILLLLADEYMRRSQYDKATPLLQRLSELNPQNPLPYYLLARLYMAQGDQKKAIE 167 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALE 337 LEK +V P E I L E+ L +A L + + + +L ++ + Sbjct: 168 YLEKSLRVKPTFEAGFITLGGLYESRGE-LSKAETLYKSILEKDPNNRVALERLASLYAS 226 Query: 338 MGSIDQAHAKAMLAMKIAPRK 358 G ++A + + P Sbjct: 227 SGRWEEAKETYRKLIDLYPDS 247 >gi|77920692|ref|YP_358507.1| TPR repeat-containing protein [Pelobacter carbinolicus DSM 2380] gi|77546775|gb|ABA90337.1| TPR repeat protein [Pelobacter carbinolicus DSM 2380] Length = 313 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 17/246 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISP 185 + A + L L+ GDL ++ +AL ++P Sbjct: 71 ALYDQGDLPRAIKAFRAALAESREPF---RILFKLGLAQYGLGDLAASVASFKQALQVNP 127 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + Y+ + +A L+ + ++ R L + + +G+ + Sbjct: 128 ASAETCYRLGLSYLRQSDLEQARAALDDAIRLNPKYTR----ALFILGMIYSQQGNPTEA 183 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300 + + + A +L+ + +A EK +P H + Sbjct: 184 IRLFRQVEQASPDYTEACFELGMALLRNGELDEAAAQFEKTTVNSPRFTPAHFMLGEA-- 241 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + + + E N E + +++ +G D A + + P Sbjct: 242 RRRAGKLSEAISAYRQALEQNPRDTEGWLHLAECQARLGQTDAAREALDKVLSLHPEHHQ 301 Query: 361 FLLLAQ 366 LA+ Sbjct: 302 AKALAE 307 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 4/160 (2%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L +++ +G + + E+LKL + A +L Q +A Sbjct: 26 RDARSLHEEAVDLYHRGQVEQALSLWKEALKLEPDFSQAHYYIGLALYDQGDLPRAIKAF 85 Query: 284 EKIWKV--NPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 P + + + + + ++N S E+ + L Sbjct: 86 RAALAESREPFRILFKLGLAQYGLGDLAASVASFKQALQVNPASAETCYRLGLSYLRQSD 145 Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKIL 379 ++QA A A+++ P +L I + T+ I Sbjct: 146 LEQARAALDDAIRLNPKYTRALFILGMIYSQQGNPTEAIR 185 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 4/139 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G++ N A ++ V Q + E L L + + A + E Sbjct: 171 GMIYSQQGNPTEAIRLFRQVEQASPDYTEACFEL--GMALLRNGELDEAAAQFEKTTVNS 228 Query: 151 ATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 R + + E+ R G L+ A +AL+ +P + + + A Sbjct: 229 P-RFTPAHFMLGEARRRAGKLSEAISAYRQALEQNPRDTEGWLHLAECQARLGQTDAARE 287 Query: 210 FLNQKKKNAKEWNRNRAIL 228 L++ E ++ +A+ Sbjct: 288 ALDKVLSLHPEHHQAKALA 306 >gi|34495505|ref|NP_899720.1| protein porphyrin biosynthesis [Chromobacterium violaceum ATCC 12472] gi|34101361|gb|AAQ57730.1| protein porphyrin biosynthesis [Chromobacterium violaceum ATCC 12472] Length = 402 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 46/387 (11%), Positives = 119/387 (30%), Gaps = 13/387 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + +L + + + + S +++ ++ + ++ Sbjct: 1 MRFALWITGLFALAVLVGLASTLNTGYAILFLPPYRMEVSFNLMIVLVVALIVVTHIVLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF-HNE 119 + P + ++ AL ++ A + + N Sbjct: 61 LIALAADLPRQVQRFQRQKKLKAARHALREAGIAFFEGRFQKAEREAAKSLGDEYSAENR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA-- 177 L L+ + A + + E L + Q+P R + ++ D ++ A Sbjct: 121 ALALLIAARAAGSAGDGDKRDEYLNQLDQLP-ARLQLARHMLDAELKLDDKDALGALAAI 179 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIAR 232 +A +SP+ ++ +L K+ AI L +K A R R + Sbjct: 180 ERARALSPNLTNALRLELKVRLLQKQ-PEAILLLTEKLLKADALEPEQARRYRLAAYQQQ 238 Query: 233 SLENADKGDMIASYHDAIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWKV 289 + ++ ++ + ++A + + + +++ Sbjct: 239 LAGLLSEREVKEWLRRIPDAERGNPQLLQQVVAHLIKLQEYDYAATLLAGALAGDEMELP 298 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 E+ + HL E + LK A ++ L+ + ++A +A + Sbjct: 299 ELARELGQLAAHLSVEKRLELLKDAENWLKLRPRDHWLLLALGRLAQAQQLWGKAQSYLE 358 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTD 376 ++ I P LA++ +A Sbjct: 359 ASVSIQPTLCAHAELARLFEATGKEDA 385 >gi|327398313|ref|YP_004339182.1| hypothetical protein Hipma_0143 [Hippea maritima DSM 10411] gi|327180942|gb|AEA33123.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima DSM 10411] Length = 381 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 83/213 (38%), Gaps = 21/213 (9%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G + A++Y AL I+P + + Y +K+W A+ + K+ + + Sbjct: 131 KKAGLYDRAKKYFKDALSINPKNNLAKRLLYEVYEDSKDWENAL--VWHKRFDGVD-KHT 187 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + +G++ + + ++LK + I A + K KA + E Sbjct: 188 VAHLYTELGKDKLKEGNLEEAKKNFEKALKEHKSCIDALLHLGDIYFQYGKLEKAYDLWE 247 Query: 285 KIWKVNPHPEIANIYTHLLSENTV------GKLKRALRLEEINKESVESLVIVSKIALEM 338 K+ PE ++ + + ++ + L R ++V L ++ L++ Sbjct: 248 KVCITK--PEFCDLALNRIQDDAILENKLKDILNRF-------PDNVFILFFSAEAFLKL 298 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQ 369 DQ + K F+L LA+IE+ Sbjct: 299 QK-DQKATSLYKTLLKKGIKSPFILKRLAEIEK 330 >gi|326526657|dbj|BAK00717.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 955 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 92/301 (30%), Gaps = 45/301 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + E LE +L+ P + E GD+ +A+ +A Sbjct: 587 AAQLE-KSHGTRESLEAILRKAVTYNPKAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 644 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P + + A + E RA L + ++ ++ R L G++ Sbjct: 645 IPISEEIWLAAFKLEFENNEPERARMLLTKARERGGTERVWMKSAIVEREL-----GNVN 699 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTH 301 E LKL + + + KA+ + E K P P ++ + Sbjct: 700 EERRLLEEGLKLFPSFFKLWLMLGQMEDRIGHVPKAKEVYENGLKHCPGCIPLWLSLASL 759 Query: 302 LLSENTVGKLKRALRLEEI-NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 N + K + L + N + E + + L G+ +A + A++ P I Sbjct: 760 EERINGLSKSRAFLTMARKKNPATPELWLAAIRAELRHGNKKEADSLLAKALQECPTSGI 819 Query: 361 FLLLA---------------QIEQANSHNT---------------DKILYWTQSALHAMP 390 A I++ + DK W A+ P Sbjct: 820 LWAAAIEMVPRPQRKSKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVTLAP 879 Query: 391 D 391 D Sbjct: 880 D 880 >gi|78185601|ref|YP_378035.1| TPR repeat-containing protein [Synechococcus sp. CC9902] gi|78169895|gb|ABB26992.1| TPR repeat [Synechococcus sp. CC9902] Length = 605 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 32/243 (13%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R + N A +YA + + P P Q + K+ A + A + Sbjct: 56 LRFNNNNEAIKYAQELITHHPRNPHGYSRYAQALLQQKQPFNANQMALSGLQEAP--HNQ 113 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + L + S + ++ D S A + ++ + M + AA++L+ NK +A I E Sbjct: 114 QLLALTSESYQALERWD--QSLELANQLIEFHPSLHMGYLKAAQNLLKLNKPNEASSIAE 171 Query: 285 KIWKVNP-HPEI----ANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + K P HP + + Y HL + + L A L E +S+E ++ L+ Sbjct: 172 RGLKAKPNHPHLHSIASEAYRARHLHNHS----LNHAKALIENQPDSIEGHKRAAQDLLK 227 Query: 338 MGSIDQA---------HAKAMLAMKIA--------PRKEIFLLLAQIEQANSHNTDKILY 380 +G ++A K+ A +A +L Q+ +AN D Sbjct: 228 LGLRNEAILIIEQLIQRNKSKKAAAMASKLFKVAGQTSRSLVLTTQLAKANDATDDDQRQ 287 Query: 381 WTQ 383 W Sbjct: 288 WIS 290 >gi|117923474|ref|YP_864091.1| tetratricopeptide repeat protein [Magnetococcus sp. MC-1] gi|117607230|gb|ABK42685.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 400 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 9/162 (5%) Query: 133 ERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A + +L+ P TR A+Y L + + G ++ A + L++ P Sbjct: 96 QGELGRAIRMHQNLLERPNLSRETRIAALYGLGEDYRKSGFVDRAVHAYHQTLEVDPGHL 155 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYH 247 A++ + K W +A+ L + +K E R A L + E S Sbjct: 156 KALRALMTLHENEKRWDKALEMLERIRKVTGDEDPRRAAHLRVQIGREQLRHDVAPPSVE 215 Query: 248 DAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 DA ++++ + A A+ + A +L++ Sbjct: 216 DATRNFERAIEVHPGCVEARRIMAEVALKGGDPGHAVDLLKE 257 >gi|120553958|ref|YP_958309.1| tetratricopeptide repeat protein [Marinobacter aquaeolei VT8] gi|120323807|gb|ABM18122.1| TPR domain protein [Marinobacter aquaeolei VT8] Length = 390 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 106/312 (33%), Gaps = 38/312 (12%) Query: 134 RQYNIAHEKLEMMLQIPA---------TREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + + A + +L P T+E A+ + G L+ A+ + + Sbjct: 84 GETDRAILIHQNLLARPELPARYSPQVTQELAM-----DYLNAGLLDRAEALFHQLMGDR 138 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 A+++ Y +EW +A L + + + I + D Sbjct: 139 EYGRRSAIALIELYQQEREWEKAAQVAKTLTRSDADPATFKALAYITCELSDGALSRNDD 198 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIY 299 + A E+L + + A++ K I Q R+A KI+ NP PE + Sbjct: 199 RWTAQKLAKEALDYDRSCVRATLLLMKLQIRQGNFREAANQSLKIFDQNPEFGPEAIDRL 258 Query: 300 THLLSE-NTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAP 356 L E V +L +L ++ ++ + ++++ + A + ++ P Sbjct: 259 MKLEREHGDVSRL--YKKLRKLYEQYPSTSLLLALVESVERSSGRPAAIDLLRMELETRP 316 Query: 357 RKEIFLL---LAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS---VWLPLSP 410 L +A E+ + + +++ + A P++ S WL P Sbjct: 317 SVRGLLRLVEMAGYEKGMTTDEGRLVSRIGHLILANR-PVYRCVSCGFSGQQLHWL--CP 373 Query: 411 ISKTLCYFEWKI 422 K +W+ Sbjct: 374 SCK-----QWET 380 >gi|119357637|ref|YP_912281.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] Length = 3035 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 33/249 (13%), Positives = 83/249 (33%), Gaps = 19/249 (7%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 +++ V L + A + +LQ P A+ L + + + A Sbjct: 27 HDHAVTLHSALAFHQNGALDEAEALYQAILLQNPE-HFDALQLLATIAAQRNESEKAVAL 85 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +AL+I+PD + + A+ + ++ A I R Sbjct: 86 FDQALNINPDHSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDY----ADAYINRGNVL 141 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + +++ L + A ++++ ++ A EK +N P A Sbjct: 142 MELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALN--PCFA 199 Query: 297 NIYTH--------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + Y + + ++ + + K+A+ L + E+ + + + + + A Sbjct: 200 DAYYNKGLALQKLMRYDDALERYKQAIAL---KPDYTEAFLHQGNVFMALQRYENALLSY 256 Query: 349 MLAMKIAPR 357 + + P Sbjct: 257 EHVIALNPD 265 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 83/300 (27%), Gaps = 53/300 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 +AR H+ NE V L E + + A +L A+ Sbjct: 793 ERSVARPSHAAGRST----NEESVKLQRALTLHQEGRLDEAEALYREILSSSPEHFDALQ 848 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + + D A +A+ I+P P + + A+ + + Sbjct: 849 LSATIAAQRHDSEQALVLFDQAISINPGHPGSRNNRGNALRALQRYEEALDSYEKALQLK 908 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-----ASICAA------ 267 ++ R + + ++ + + A + A Sbjct: 909 PDY----VDAYTNRGSVLLELKRYEEALASYERAIAIKPDHTEFYSDLAVVLLALKRYEE 964 Query: 268 -----------------------KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 L+ + +A EK +N P+ A Y++L Sbjct: 965 ALATYERVLELRRDDPVVYNNRGNVLLELKRYEEALGSYEKAIALN--PDYAEAYSNL-- 1020 Query: 305 ENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 T LKR + + + ++ + + ++ ++A A A+ + P Sbjct: 1021 GVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPD 1080 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 56/206 (27%), Gaps = 9/206 (4%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 +AR H+ E V L E + + A +L A+ Sbjct: 1608 ERSVARPSHAAGRSTK----EESVKLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQ 1663 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + + D +A +AL I PD K + A+ + Sbjct: 1664 LSATIAAQRHDSENALVLFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIAVK 1723 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ R + + ++ L + +L+ + Sbjct: 1724 PDFIEP----YSNRGNTLQELKRYEEALACYDSAIALKPDYAEPYYNQGNALLELKRDED 1779 Query: 279 AEVILEKIWKVNPHPE-IANIYTHLL 303 A EK + P + ++ + H+ Sbjct: 1780 AVRSYEKALALKPDYDFLSGLCLHIR 1805 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 22/219 (10%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R++ + NE V L E + + A + +L A+ Sbjct: 2254 RRVALPSQMEGLSTNEESVKLQRALKLHQEGRLDEAEAICQEILSSIPEHFDALQLSATI 2313 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + D A +AL I PD K + A+ + ++ Sbjct: 2314 AAQRHDSEKALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDY-- 2371 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN----KKRKA 279 ++ +++G+ + E++ D +I A + ++ K ++ Sbjct: 2372 ---------AMAYSNRGNTLQGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRY 2422 Query: 280 EVILE---KIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 LE K + P+ A ++ NT+ +LKR Sbjct: 2423 ADALESHDKAIALR--PDYAEACSN--RGNTLQELKRYE 2457 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 90/305 (29%), Gaps = 53/305 (17%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE----------RQ 135 +ALY ++S ++ A ++ + ++ Q H+ +L Q Sbjct: 830 EALYREILS-SSPEHFDALQLSATIAAQR--HDSEQALVLFDQAISINPGHPGSRNNRGN 886 Query: 136 YNIAHEKLEMMLQIPATREFAV----------YSLYFESCRIGDLNSAQRYATKALDISP 185 A ++ E L + + + A +A+ I P Sbjct: 887 ALRALQRYEEALDSYE-KALQLKPDYVDAYTNRGSVLLELKR--YEEALASYERAIAIKP 943 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D + + K + A+ + E R+ ++ R + + Sbjct: 944 DHTEFYSDLAVVLLALKRYEEALATYERVL----ELRRDDPVVYNNRGNVLLELKRYEEA 999 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-----KVNPHPEIANIYT 300 +++ L + A++ + RK E+ + P+ A+ Y Sbjct: 1000 LGSYEKAIALNPDY-------AEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYY 1052 Query: 301 HL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + E + RA+ L + VE L++ ++A A+ Sbjct: 1053 NRAVLFYDLDRYEEALASYDRAIVL---KPDFVEVFSNRGNALLKLKRYEEALGSYEKAI 1109 Query: 353 KIAPR 357 + P Sbjct: 1110 ALKPD 1114 >gi|332265872|ref|XP_003281937.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like [Nomascus leucogenys] Length = 1050 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 105/307 (34%), Gaps = 25/307 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Query: 358 KEIFLLL 364 LLL Sbjct: 394 FADALLL 400 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 4/174 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A ++ + H + L L I + A L++ A Sbjct: 307 GSVAEAEDCYNTALRLCPTHADSLNNL--ANIKREQGNIEEAVRLYRKALEVFPEFAAAH 364 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKK 216 +L + G L A + +A+ ISP + + + ++ A+ + + Sbjct: 365 SNLASVLQQQGKLQEALMHYKEAIRISPTFADALLLIWENTLKEMQDVQGALQCYTRAIQ 424 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + L + S D G++ + +LKL + A A L Sbjct: 425 INPAFADAHS-NLASISXGTTDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 477 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 74/236 (31%), Gaps = 11/236 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ N +V+ + + ++A + +++ A +L Sbjct: 243 RAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANA 302 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A+ AL + P + A+ + + E+ Sbjct: 303 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-- 360 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK-SLISQNKKRKAEVI 282 A + +G + + E++++ A + + +L + A Sbjct: 361 --AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADALLLIWENTLKEMQDVQGALQC 418 Query: 283 LEKIWKVNP-----HPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I S N + ++ + ++ ++ Sbjct: 419 YTRAIQINPAFADAHSNLASISXGTTDSGNIPEAIASYRTALKLKPDFPDAYCNLA 474 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|15236308|ref|NP_192252.1| EMB2770 (EMBRYO DEFECTIVE 2770); RNA splicing factor, transesterification mechanism [Arabidopsis thaliana] gi|4206197|gb|AAD11585.1| putative pre-mRNA splicing factor [Arabidopsis thaliana] gi|7270213|emb|CAB77828.1| putative pre-mRNA splicing factor [Arabidopsis thaliana] gi|16604551|gb|AAL24077.1| putative pre-mRNA splicing factor [Arabidopsis thaliana] gi|23296408|gb|AAN13111.1| putative pre-mRNA splicing factor [Arabidopsis thaliana] gi|332656920|gb|AEE82320.1| pre-mRNA-processing factor 6 [Arabidopsis thaliana] Length = 1029 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 96/299 (32%), Gaps = 41/299 (13%) Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + + E L+ +L+ P + E GD+ +A+ +A Sbjct: 665 AAQLE-KSHGSRESLDALLRKAVTYVPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 722 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--- 240 P++ + A + KE RA L + ++ ++ R L N ++ Sbjct: 723 IPNSEEIWLAAFKLEFENKEPERARMLLAKARERGGTERVWMKSAIVERELGNVEEERRL 782 Query: 241 --------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + LK C + I + A N Sbjct: 783 LNEGLKQFPTFFKLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVN 842 Query: 275 KKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332 KA IL K N P A ++ + +E + A L ++ +S ++ + Sbjct: 843 GLNKARAILTTARKKN--PGGAELWLAAIRAELRHDNKREAEHLMSKALQDCPKSGILWA 900 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +EM + K++ AMK R + +K W + A+ PD Sbjct: 901 -ADIEMAPRPRRKTKSIDAMKKCDRDPHVTIAVAKLFWQDKKVEKARAWFERAVTVGPD 958 >gi|27366254|ref|NP_761782.1| tetratricopeptide repeat-containing protein [Vibrio vulnificus CMCP6] gi|37679487|ref|NP_934096.1| hypothetical protein VV1303 [Vibrio vulnificus YJ016] gi|320156763|ref|YP_004189142.1| heat shock protein YciM [Vibrio vulnificus MO6-24/O] gi|27362455|gb|AAO11309.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus CMCP6] gi|37198231|dbj|BAC94067.1| predicted N-acetylglucosaminyl transferase [Vibrio vulnificus YJ016] gi|319932075|gb|ADV86939.1| heat shock (predicted periplasmic) protein YciM precursor [Vibrio vulnificus MO6-24/O] Length = 389 Score = 61.1 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 51/344 (14%), Positives = 106/344 (30%), Gaps = 69/344 (20%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + + + + + A + E +++ P R Sbjct: 83 GEVDRAIRIHQNLISRSGLTIEQKNIALQQLAKDYMVSGFLDRAEKIFEQLVEEPEHR-- 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++A + V+ +EW +AI + + Sbjct: 141 ---------------DAAL----------------QQLVLIYQ-QTREWDKAIHYAHLLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K K+ R A ++ G+ S ++L+ + ASI + + Sbjct: 169 KTGKKSIRKNIAHYWCELAMLEQADGNKTKSISHFKKALQEDPKCVRASISLGRIYLEME 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + RK LE + + P +A Y HL E+ + + RA + + S E Sbjct: 229 EYRKTIEYLEHVLEQDADFVSEALPILAECYHHLGQEDQLVEFLRA-CISKKAGVSAE-- 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQANSHNTDKILYWTQ 383 ++++++ S+ A + P + L+ A+ E + Sbjct: 286 LMLAQLVAHHESVGAAQELLTRQLIKNPTMKGFYRLMDYHLAEAE------DGRAKESLT 339 Query: 384 SALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 340 -TLQAMVGEQLKIKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 380 >gi|113476439|ref|YP_722500.1| hypothetical protein Tery_2853 [Trichodesmium erythraeum IMS101] gi|110167487|gb|ABG52027.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 3172 Score = 60.7 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 82/233 (35%), Gaps = 11/233 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL + A ++I A YSL L K ++I P+ Sbjct: 1749 ALLPGKLEEAISYYRKAIEIEPYLTEAYYSLANILVNQNQLEKVVILYEKLIEIQPNLWE 1808 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++S AI+ K + + L + G++ + + Sbjct: 1809 PHHNLGDILIKQEKFSEAISAYGHAIKLNPNSSVSYVKLADILAKV----GELSQAINAY 1864 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304 +++ + + + A +L ++ +K +A + K ++ P H ++ +++ Sbjct: 1865 YKAIAIDPDFVDAYQYLGDALRNKGEKEEAIKVYRKAIEIRPQLWEVHHKLGSLFQETEE 1924 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 T R + E+N + S + + + + +A A+++ P Sbjct: 1925 LETAANAYR--KSIELNPDFCWSYNNLGDVLVRLEKWSEATGVYSRAIELNPD 1975 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 32/239 (13%), Positives = 72/239 (30%), Gaps = 30/239 (12%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY--SLYFESCRIGDLNSAQRYATKAL 181 L+ + + + A + ++ P + E +L E ++ D +A +++ Sbjct: 2114 LQGDTLVEKGEKEKAIKVYRKAVEMEPESWEVHHKLGNLLQEIGKLEDAIAAYN---ESI 2170 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++ PD W + V + + AI QK + L + Sbjct: 2171 ELKPDLSWSYNNLGDVLVRLGKLNEAIK-YYQKAIYLEPNFAWSYYNLAELCFLLEKWDE 2229 Query: 242 MIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + +Y +E + + + A Q K +A Sbjct: 2230 AVNAYRRFME---IQPDFSPEVEEKLNQALHQQVQGKLEQALSY---------------- 2270 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + + +K + EI + E + + + G ++A A+ P Sbjct: 2271 YRQGIRNDPTD-VKSYEKALEIKPDDAELYLGLGHAWIAKGQSEKAILAYQKAIDKNPD 2328 >gi|330994519|ref|ZP_08318443.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp. SXCC-1] gi|329758373|gb|EGG74893.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp. SXCC-1] Length = 1265 Score = 60.7 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 98/284 (34%), Gaps = 35/284 (12%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP- 188 ALA + A + R A+ L + R GD+ +A+R+ +A ++PD Sbjct: 306 ALAHGELEQAERDFSSSMGTDPPRPEALEGLGLVAQRRGDIPAARRWLEQARALAPDDAG 365 Query: 189 -------------WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSL 234 A + V ++ A L +K + + + R +IA + Sbjct: 366 IRNALAGLDAPGGDPQLARLWALVARHQYDEAQAMLPAVEKDHGRIADTLRVRAIIAHAR 425 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP- 293 + L+L + A+ + LI + + +AE + ++ + +P Sbjct: 426 HEL-----PRAEAAWRAVLRLVPGDLPAAAALSDVLIEEGRITEAEGWVARL-RAAHYPG 479 Query: 294 --EIANIYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAHAKA 348 + ++EN +RAL LE+ +++ + + ++++ L G +A A Sbjct: 480 VTGLEAGVLGAMAENEPDPARRALLLEQALRDAPHNGWLRLHLAQLWLARGQATRARALM 539 Query: 349 M----LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 L K ++ A + + A Sbjct: 540 APLCNLPPKTDEDTQVCFAFA----LQDQDMPRADALLARLPRA 579 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 27/171 (15%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A +AL I PD + V + + A L Sbjct: 67 GDDMHALHALQRALRIEPDNLEAGLMLGAVQVHQNDMAGARATLQ--------------- 111 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 A + + + A ++ A++ A+S KK +A ++ ++ Sbjct: 112 ---ALQAQPGAQAQVAALRGWIGQA-----PIDPAALANARSAADTGKKLQATLLYRAVF 163 Query: 288 K-VNPHPEIANIYTHLLSENT---VGKLKRALRLEEINKESVESLVIVSKI 334 + +P P++ Y +LS + +R L + +E + +++ Sbjct: 164 QGAHPLPDMELEYDRVLSGSLSGYTEATQRLRALGALLPHDLEIRMALAQA 214 >gi|255075311|ref|XP_002501330.1| hypothetical protein MICPUN_57757 [Micromonas sp. RCC299] gi|226516594|gb|ACO62588.1| hypothetical protein MICPUN_57757 [Micromonas sp. RCC299] Length = 1496 Score = 60.7 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 84/276 (30%), Gaps = 29/276 (10%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q+AL + A LE +++ + GD+ A++ A + +P Sbjct: 1038 AQVALRSGDVSAAQALLEDARTRDGDNVRVLHASAQLAEASGDVEGARKIFAAAAERAPR 1097 Query: 187 APWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P V + + + A E R + ++ + Sbjct: 1098 DPHVALSRARLQCWKLDDPDGAREIFTAAAAANPENYR------VLQAWAVMESRRPRGG 1151 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 + KL +A + AA+ L +A + W + + + Sbjct: 1152 GGKVADYAKLTFEDKVAGMAAARPLFQ-----RAADV--APWATK----VWAAWAQAEFD 1200 Query: 306 NTVGKLKRALRLEEINKESVESLVI----VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 T + RA L S + V+ + ++ QA A+ + PR + Sbjct: 1201 ATGD-VDRARELYTRGLASDPTSVVCLRGLGRVERTAERFSQARDYLERALDLEPRNHMC 1259 Query: 362 -LLLAQIEQANSHNTDKILYWT-QSAL----HAMPD 391 LA IE+ + + Y+ AL A D Sbjct: 1260 VRELAMIEEKSGNKARAARYFNVAKALVKEEKAARD 1295 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 20/217 (9%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PA 151 +++ + ++ A+ + + + L Q+A A A + + P Sbjct: 1040 VALRSGDVSAAQALLEDARTRDGDNVRVLHA--SAQLAEASGDVEGARKIFAAAAERAPR 1097 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQYVLAKEWSR 206 A+ + ++ D + A+ T A +P+ W + + + Sbjct: 1098 DPHVALSRARLQCWKLDDPDGAREIFTAAAAANPENYRVLQAWAVMESRRPRGGGGKVAD 1157 Query: 207 -AITFLNQK-----------KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 A K ++ A + E GD+ + L Sbjct: 1158 YAKLTFEDKVAGMAAARPLFQRAADVAPWATKVWAAWAQAEFDATGDVDRARELYTRGLA 1217 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 S++ + + + +A LE+ + P Sbjct: 1218 SDPTSVVCLRGLGRVERTAERFSQARDYLERALDLEP 1254 >gi|301122157|ref|XP_002908805.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262099567|gb|EEY57619.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 632 Score = 60.7 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 83/228 (36%), Gaps = 14/228 (6%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G +A + A + P W+ + + A ++ + + A Sbjct: 263 AGLYKNALAVISTAFERFPTHKWLVLLGAMAHFKLGDVYEARRA-YRRLIDGGLYVEPSA 321 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + G+ A+ +E+L+ + + + + A + + R A I EK Sbjct: 322 FN--SYAKMEEELGNEDAAVGLYVEALEQHPDHVPSMMSLAILYKRRGRMRNARKIFEKA 379 Query: 287 WKVNPH--PEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGS 340 + H P + + + E G+L A L + +VES ++++ + + Sbjct: 380 LENLQHTGPIL-HAFGDF--EEQHGELDNARELYDEATNVQPTTVESWRALARVEARLKN 436 Query: 341 IDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALH 387 + A + +A + P L+ LA+IEQ N + AL Sbjct: 437 YEAARSALTMASQHVPNDAPLLVELAKIEQRNRRFPA-ARTALEKALK 483 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 71/257 (27%), Gaps = 57/257 (22%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE----------SCRIGDLNSA 173 LL A ++ LY E +G+ ++A Sbjct: 288 LLGAMAHFKLGDVYEARRAYRRLIDG---------GLYVEPSAFNSYAKMEEELGNEDAA 338 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 +AL+ PD ++ Y A + +N + + +L A Sbjct: 339 VGLYVEALEQHPDHVPSMMSLAILYKRRGRMRNARKIFEKALENLQ----HTGPILHAFG 394 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 G++ + E+ + ++ + W+ Sbjct: 395 DFEEQHGELDNARELYDEATNVQPTTV------------------------ESWRA---- 426 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +A + L + + AL + + LV ++KI A A+ Sbjct: 427 -LARVEARLKNYEAA---RSALTMASQHVPNDAPLLVELAKIEQRNRRFPAARTALEKAL 482 Query: 353 KIA-PRKEIFLLLAQIE 368 KI ++ + A +E Sbjct: 483 KIDSSDAAVWNMRALLE 499 >gi|220935559|ref|YP_002514458.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996869|gb|ACL73471.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 944 Score = 60.7 bits (146), Expect = 5e-07, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 88/257 (34%), Gaps = 12/257 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 E A +L+I A+ L + R GD+++A+ + +A++ +PDA Sbjct: 540 EGNQASAERYFNAVLRIEPRHGLAMLGLAESAVRRGDVSTAESWLQRAVEANPDAVLPRL 599 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + + AI+ + + R +L ++ GD+ + Sbjct: 600 WLSRFHAQSGNADAAISTAREAVAASPRDPRALGLLAELQAR----NGDLDGAADTYGML 655 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTV 308 + + + + + A Q ++ +A + +V P ++ + L+ Sbjct: 656 INVVPDDLTGRLALAGIAAQQGREGEARQHINAALEVAP-RDLRVLEQAGRVELILGQVD 714 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLA 365 L A + E S ++ + + G +QA A ++ P +A Sbjct: 715 ASLAYARQARESYPSSPVGWMLEADALVSAGRHEQARDAYARAHRVLPASLSARRLAQMA 774 Query: 366 QIEQANSHNTDKILYWT 382 + + + W Sbjct: 775 ERAGDERQALEVLQDWL 791 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 86/267 (32%), Gaps = 16/267 (5%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 ++ A LE + + A+ + G+ +A+ +AL SP P Sbjct: 371 GRHGDAMAVLEPLRAGGQDAESVALLAMIG--RSATVSGEFETAESAFREALAASPGDPA 428 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + + + AI L+ + A + G++ + A Sbjct: 429 LRGDLARLHAAQGRYDEAIDQLSALVREG------DAAAELFLVRTLVASGNVALALSQA 482 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSENT 307 + + + Q ++ + L V+ P + + L E Sbjct: 483 RALAERSPDRPEWHTLVGLIQLQQGERTQGRASLINALNVDDAYLPALLALGRLGLEEGN 542 Query: 308 VGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +R + I +++ +++ A+ G + A + A++ P + L Sbjct: 543 QASAERYFNAVLRIEPRHGLAMLGLAESAVRRGDVSTAESWLQRAVEANPDAVLPRLWLS 602 Query: 367 IEQANSHNTDKILYWTQSALHA-MPDP 392 A S N D + + A+ A DP Sbjct: 603 RFHAQSGNADAAISTAREAVAASPRDP 629 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 88/266 (33%), Gaps = 43/266 (16%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 +A+ N+ LA + + + LV L+++Q + + L L + Sbjct: 470 VASGNVALAL-SQARALAERSPDRPEWHTLVGLIQLQ----QGERTQGRASLINALNVDD 524 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ +L G+ SA+RY L I P + + V + S A ++L Sbjct: 525 AYLPALLALGRLGLEEGNQASAERYFNAVLRIEPRHGLAMLGLAESAVRRGDVSTAESWL 584 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + + R L S +A G+ A+ A E++ A A+ Sbjct: 585 QRAVEANPDAVLPRLWL----SRFHAQSGNADAAISTAREAVAASPRDPRALGLLAELQA 640 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 A A+ Y L + + + + + Sbjct: 641 RNGDLDGA----------------ADTYG---------------MLINVVPDDLTGRLAL 669 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + IA + G +A A+++APR Sbjct: 670 AGIAAQQGREGEARQHINAALEVAPR 695 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 88/289 (30%), Gaps = 40/289 (13%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + L Q A A +L +LQ A + L + ++AQR Sbjct: 41 GEDSATRLERAQTLEAAGDVRAAAFELRRILQDDPDHAQARFGLGRLNVLAARGDAAQRE 100 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---------------------------- 208 +AL++ V ++ ++ + ++ A+ Sbjct: 101 LRRALELGIPGDEVMPWLIDALLIQERFADALSEVSSLLSADNASTARWLLRRVEANLGL 160 Query: 209 ---TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 L+ ++ +A + +A++ +GD A+ + A ++ + + + Sbjct: 161 GRYDELSTDLDAIADYGVEQARVWMAQAQFANHQGDSAAALNLARKAARADPDDPRTAFT 220 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE---------IANIYTHLLSENTVGKLKRALR 316 + Q ++AE L + + + + L T + Sbjct: 221 HGWLALRQALFQEAESALLESTRAARARANDSDLTRANLLLVEARLGQGKTSEAEAVIVE 280 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 LE + + E + +A G+ A ++ P LLA Sbjct: 281 LESLLGDIPELSYLKGLVAYRQGNFGVARDSLRDTLQRRPEHHQARLLA 329 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 34/326 (10%), Positives = 81/326 (24%), Gaps = 67/326 (20%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + N A L L E+Q + A + M++ + Sbjct: 605 HAQSGNADAAISTAREAVAASPRDPRALGLLAELQA--RNGDLDGAADTYGMLINVVPDD 662 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPD---------------------APWVTE 192 +L + + G A+++ AL+++P + + Sbjct: 663 LTGRLALAGIAAQQGREGEARQHINAALEVAPRDLRVLEQAGRVELILGQVDASLAYARQ 722 Query: 193 AVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRAILLIAR-----SLENADKGDMIA 244 A W + A+ + ++ + R +L + + GD Sbjct: 723 ARESYPSSPVGWMLEADALVSAGRHEQARDAYARAHRVLPASLSARRLAQMAERAGDERQ 782 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKK---------------------------- 276 + + L+ + A + A ++ Sbjct: 783 ALEVLQDWLETSPQDVSAMLNLAMLHQRHGRRNEAEVLYGQVLTFDPDQVAALNNLAWLY 842 Query: 277 -----RKAEVILEKIWKVNPHPEIANIY--THLLSENTVGKLKRALRLEEINKESVESLV 329 +A + K +++ P ++ Y + S + L E E Sbjct: 843 HERQDSRALEMARKAYELQPGAATSHTYGWMLVESGDVASGLSLIESAAEAAP-IPEVRY 901 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ G +A + Sbjct: 902 RLAVALTRAGDDPRARQVLGQLLGEH 927 >gi|293604319|ref|ZP_06686726.1| hypothetical protein HMPREF0004_2302 [Achromobacter piechaudii ATCC 43553] gi|292817196|gb|EFF76270.1| hypothetical protein HMPREF0004_2302 [Achromobacter piechaudii ATCC 43553] Length = 537 Score = 60.7 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 48/369 (13%), Positives = 116/369 (31%), Gaps = 16/369 (4%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 + +V + S + + ++ + + + L+ P + KR + Sbjct: 24 HSGNVLLLVWPWRIGMSLTLAVLLIVATFIVLYVGLRLLAWLLAIPDRVRVWRGKRAQAR 83 Query: 84 GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 ++ L G + + +A K + + Q L L + A +++ Sbjct: 84 DHELLERGWIGLLEGRYAVAEKDLTKLLDQTKVQTRRVLAALSAARAAHGLGEFDRRDRL 143 Query: 143 LEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD-ISP------DAPWVTEAV 194 L + T L + D+ Q A +AL ++P + Sbjct: 144 LATAQEQAGTDP----GLVEATATVSADMLLDQGRAERALAVLAPLADGGARHLHTMRLL 199 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESL 253 ++ + + L + R+ A +L+ A ++ + L Sbjct: 200 LRAHTALHH-DEQVFTLARGLVRRNALPRSEADVLIDASGAARLRAAAHSDAWRAIWKDL 258 Query: 254 KLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 K + + ++ A + + + +A +LE V +P + Y +E +L Sbjct: 259 KAEERLLPDVALAGAAAFEAAGEANEAARVLEAAIAVKFNPALVAAYARCDAEQVSRRLS 318 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 +A + + L + + L QA + ++ + LL + + Sbjct: 319 KAETWLQQRPTDPDLLTALGMLCLNGQLWGQAERYLLRSLSRRSDAQTHALLGSLYDRLN 378 Query: 373 HNTDKILYW 381 D + +W Sbjct: 379 RPADAVRHW 387 >gi|221211569|ref|ZP_03584548.1| putative hemY protein [Burkholderia multivorans CGD1] gi|221168930|gb|EEE01398.1| putative hemY protein [Burkholderia multivorans CGD1] Length = 395 Score = 60.7 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 130/397 (32%), Gaps = 21/397 (5%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + + L Sbjct: 3 LRGIVWLAVLFAIAVALATVGRFDAGQVLIVYPPYRVDVSLNLFVISVVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARTRNEKAQASLRDAIANLYAGRFSRAEKAAREALAVDANQGAA 122 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + A A + + + E + ++ A L R ++ A A Sbjct: 123 SLV-----AATAAHRMHEYTRRDEWLSKVDAPEWQDARLLATADMRADARDADGALAALA 177 Query: 181 LDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-- 237 + + ++ K W+ + L + + + + A+ L ++ EN Sbjct: 178 DLQAGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLR 236 Query: 238 DKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 ++ + + +SL + + AA+ L++ ++ +A I+E N Sbjct: 237 ERRHDADALLEIWQSLSPVERQSPRL---ADLAAELLVALERRTEARRIVEDALAHNWDA 293 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + Y + + +++A ++ + E + L + ++ + +A + A+K Sbjct: 294 RLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLEAALK 353 Query: 354 IAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + LA++ + ++ +SAL Sbjct: 354 LADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|40063060|gb|AAR37916.1| TPR domain protein [uncultured marine bacterium 560] Length = 764 Score = 60.7 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 17/251 (6%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + NE L+Y + A Q + A + E L I A +L +G L +A Sbjct: 33 KDYPNEPLLYNISGICYKAIGQRDAAVKSFENALAIKQDFADAHNNLGVTLQELGQLEAA 92 Query: 174 QRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 ++ +AL I PD +Q+ + A+ + ++ A Sbjct: 93 VKHYEEALAIRPDYAEAHNNFGVTLQEL---GQLEAAVKHYEEALAIRPDY----AEAHN 145 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + G + A+ +++ + N A +L + A EK + Sbjct: 146 NLGITLKELGQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKSYEKALAIK 205 Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P H + N++ L +T +K + I + E + E+G +D A Sbjct: 206 PNFAEAHNNLGNVFKDLGQLDTA--VKSYEKALAIRPDYAEVHNNLGNALKELGQLDAAF 263 Query: 346 AKAMLAMKIAP 356 + I P Sbjct: 264 NCYEKTLAIKP 274 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 61/198 (30%), Gaps = 11/198 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 IG ++A + AL I D + + A+ + ++ Sbjct: 50 KAIGQRDAAVKSFENALAIKQDFADAHNNLGVTLQELGQLEAAVKHYEEALAIRPDY--- 106 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + + G + A+ E+L + + A +L + A + Sbjct: 107 -AEAHNNFGVTLQELGQLEAAVKHYEEALAIRPDYAEAHNNLGITLKELGQLDAAVESYK 165 Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K + P H + L +T +K + I E+ + + ++G Sbjct: 166 KTIVIKPNFAEAHNNLGITLKELGQLDTA--VKSYEKALAIKPNFAEAHNNLGNVFKDLG 223 Query: 340 SIDQAHAKAMLAMKIAPR 357 +D A A+ I P Sbjct: 224 QLDTAVKSYEKALAIRPD 241 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 56/158 (35%), Gaps = 4/158 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Q + A E + + I A +L +G L++A + KAL I P+ Sbjct: 155 GQLDAAVESYKKTIVIKPNFAEAHNNLGITLKELGQLDTAVKSYEKALAIKPNFAEAHNN 214 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + A+ + ++ + +L+ G + A+++ ++L Sbjct: 215 LGNVFKDLGQLDTAVKSYEKALAIRPDY--AEVHNNLGNALKEL--GQLDAAFNCYEKTL 270 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + A+ L + +A E+ + + P Sbjct: 271 AIKPEFAEANYNRGNVLKGLKRLDEALASYERAYILKP 308 >gi|242083614|ref|XP_002442232.1| hypothetical protein SORBIDRAFT_08g016670 [Sorghum bicolor] gi|241942925|gb|EES16070.1| hypothetical protein SORBIDRAFT_08g016670 [Sorghum bicolor] Length = 963 Score = 60.7 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 92/301 (30%), Gaps = 45/301 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + E L+ +L+ P + + E GD+ +A+ +A Sbjct: 595 AAQLE-KSHGTKESLDALLKKAVNYNPRAEVLWLMA-AKEKWLAGDVPAARAILQEAYAA 652 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P++ + A + E RA L + ++ ++ R L G++ Sbjct: 653 IPNSEEIWLAAFKLEFENNEPERARMLLAKARERGGTERVWMKSAIVEREL-----GNVG 707 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 E LKL + + + KA+ + E K P + L Sbjct: 708 EERRLLEEGLKLFPSFFKLWLMLGQMEDRLGNGAKAKEVFENGLKHCPSCIPLWLSLAGL 767 Query: 304 SENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 E G K L + N + E + + G+ +A A A++ P I Sbjct: 768 EEKVSGLSKSRAVLTMARKKNPATPELWLAAIRAESRNGNKKEADALLAKALQECPTSGI 827 Query: 361 FLL----LA-----------QIEQANSHNT---------------DKILYWTQSALHAMP 390 +A I++++ DK W A+ P Sbjct: 828 LWAEAIEMAPRPQRKGKSTDAIKRSDHDPHVIATVAKLFWLDRKVDKARSWLNRAVTLAP 887 Query: 391 D 391 D Sbjct: 888 D 888 >gi|238750672|ref|ZP_04612171.1| hypothetical protein yrohd0001_9270 [Yersinia rohdei ATCC 43380] gi|238711062|gb|EEQ03281.1| hypothetical protein yrohd0001_9270 [Yersinia rohdei ATCC 43380] Length = 399 Score = 60.7 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 53/365 (14%), Positives = 115/365 (31%), Gaps = 7/365 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L L ++++ + R A R Sbjct: 21 LAGHQGYVLIQTDNYNVETSVTGLVIMLVLVLVVFLIVEWILRRIFRTGARTRGWFMGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + K L+ +A + K+ + + + YLL + A + Sbjct: 81 RTRARKQTKAALIKLAEGDFKQVEKLLTRNADHA--EQPMVNYLLAAEAAQQRGDEFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G +++A+ + LD +P P V Y+ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGHVHAARHGVDRLLDRAPRHPEVLRLAELAYL 198 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN----ADKGDMIASYHDAIESLKL 255 + +S + L K + A L + + + + Sbjct: 199 RSGAYSSLLEILPAMSKVQLHTSDEIAALEQQAYIGIMNQCMAEEGSDGLKRWWKDQSRK 258 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N I + + LI N A+ ++ K + + L + N K Sbjct: 259 VRNEIPLQVALVEHLIECNDHDVAQQVILDSLKRQYDERLVLLIPRLQAGNPDPLEKSLR 318 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L+ G ++A A++ P + LA Sbjct: 319 QQIKQHGATPLLNSTLGQLMLKHGEWEKASEAFKAALEQRPDGYDYAWLADALDKLQRPE 378 Query: 376 DKILY 380 D Sbjct: 379 DAAQA 383 >gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 1-like [Rattus norvegicus] Length = 942 Score = 60.3 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 586 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 645 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 646 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 702 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 756 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + + + ++++ MG +A + PR E + L Sbjct: 757 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H +K L + AL DP Sbjct: 817 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 845 >gi|94967635|ref|YP_589683.1| TPR repeat-containing serine/threonin protein kinase [Candidatus Koribacter versatilis Ellin345] gi|94549685|gb|ABF39609.1| serine/threonine protein kinase with TPR repeats [Candidatus Koribacter versatilis Ellin345] Length = 878 Score = 60.3 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 90/275 (32%), Gaps = 26/275 (9%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + VY+ +I A ++++A ++ + L + A A+ L G + Sbjct: 566 KAVELDDHVPAVYVTLGRIHEAAGEHDLAVQEFQRALALDARSANALNGLAHSQESAGHV 625 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A+ KA + PD V + Y ++ AI L + + + ++ + Sbjct: 626 AEAEATFKKAAALRPDYWDVYNEMGLFYDRQSKYKEAIEQLKRAVQLTPDNSQ----VYS 681 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIM---ASICAAKSLISQNKKRKAEVILEKIW 287 + D D DA ++LK + A + + +A +LEK Sbjct: 682 NLAAVYIDSADPKL-RGDAEQALKKSIDLSPTYFAYANLGSLYFDEKRYAEAASVLEKAL 740 Query: 288 KVNPHPEIANIYT----------HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 ++N + I+ + + + + VI++ ++ Sbjct: 741 QINGDNYLVWIWLMNSYDWLGEQDKSAAAADKAFGLLSKEAQAKPRDASAQVILADLSAR 800 Query: 338 MGSIDQAHAKAMLAMKIAPR--------KEIFLLL 364 D+A A+ +AP + L+ Sbjct: 801 KKLTDKAMGHLQTALALAPDDPDILADAASAYELM 835 >gi|109472802|ref|XP_342789.3| PREDICTED: transmembrane and tetratricopeptide repeat containing 1 isoform 2 [Rattus norvegicus] Length = 942 Score = 60.3 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 586 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 645 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 646 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 701 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 702 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 756 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + + + ++++ MG +A + PR E + L Sbjct: 757 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 816 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H +K L + AL DP Sbjct: 817 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 845 >gi|285018377|ref|YP_003376088.1| hypothetical protein XALc_1599 [Xanthomonas albilineans GPE PC73] gi|283473595|emb|CBA16098.1| hypothetical protein XALc_1599 [Xanthomonas albilineans] Length = 392 Score = 60.3 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 90/303 (29%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ I AP Sbjct: 88 GEVDRAIRLHQGLVQRTDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQIDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ Y ++W +AI + ++ + + A + G + Sbjct: 148 ALKHLISIYQAERDWEKAIDNATRYEEVTGEPMGKLIAQFECELADRYRASGKPDLARAA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + Y Sbjct: 208 IARAYQADAKSVRAGILEGRIDVDDGNNDGAIRAFERAARHDPDYLPEIMPALMECYRRG 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L A E + + ++++ A +K P Sbjct: 268 ND------LSGARAFLSEMTEHYRGIAPVLALTRLMESQEGASAARTYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L ++ A ++ L + + +P + G + W P K Sbjct: 322 GESALIELTLAEGADSTATLQDLKHITDQLLVRNPSYRCTRCGFGARTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|301064193|ref|ZP_07204636.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300441638|gb|EFK05960.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 260 Score = 60.3 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 93/251 (37%), Gaps = 30/251 (11%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATR 153 I+ A+K + Q +E A + LE P Sbjct: 27 ISCGTDNAAQKKKATTLADL------------GQAMASEGNLRGALQKLLEASKLDPDNA 74 Query: 154 EFAVYSLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + +Y + +GD + +Y KAL++ PD P T + Y+L +W +A+ Sbjct: 75 D-----IYQQIALVFRSLGDYRLSLKYFRKALELKPDFPEATNNMGTVYLLMGDWPKAVD 129 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + +N K + A + + + GD + + S++L + A + AK Sbjct: 130 CFKKAAENIKYQTPHYAYNNLGLA--YFNMGDYEKAIQNYEMSIRLSHSYAFAYVNLAKV 187 Query: 270 LISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKESV- 325 ++ +AEV + P P++ + + + T + +++ + + S Sbjct: 188 YEAKGNLVEAEVNYREAVLYRPRDPQVLLGFAELLIKEDKTKEAKETLIKIIKEDPRSAA 247 Query: 326 --ESLVIVSKI 334 E+ +++K+ Sbjct: 248 GTEARKLLAKL 258 >gi|260903512|ref|ZP_05911907.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037] gi|308107607|gb|EFO45147.1| tetratricopeptide repeat protein [Vibrio parahaemolyticus AQ4037] Length = 391 Score = 60.3 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 105/343 (30%), Gaps = 65/343 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E +++ P +E Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPDYKEA 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ L + + A YA NQ Sbjct: 143 ALQQLVTIYQQTREWEKAIHYA----------------------------------NQLA 168 Query: 216 KNAKEWNRNR---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + +R R A ++ + G+ + ++L + ASI + + Sbjct: 169 KMGNQRSRMRTNIAHFWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRASISLGRIYLE 228 Query: 273 QNKKRKAEV----ILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ +LE K + + P IA Y HL E+ + + RA +++ S E Sbjct: 229 SEDYKQTIKYLTGVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE 287 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS 384 +++ ++ S+ A + P + F L I +A + Sbjct: 288 --LMLVQLVAHHESVGAAQELLTKQLLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS- 341 Query: 385 ALHAMPD------PLWISDDGYLSSV---WLPLSPISKTLCYF 418 L AM P + S+ W P K Sbjct: 342 TLQAMVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKGWGTI 382 >gi|34540924|ref|NP_905403.1| TPR domain-containing protein [Porphyromonas gingivalis W83] gi|34397239|gb|AAQ66302.1| TPR domain protein [Porphyromonas gingivalis W83] Length = 337 Score = 60.3 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%) Query: 174 QRYATKALDI-------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + +AL P + + + SRA+ ++ E +A Sbjct: 96 RHLTEEALAQMNLLLEEVPMHTATLLNRAKLRLEQNDPSRALEDCGTGIESTSELE-EQA 154 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L + D ++ + ++++ D I A + A+ LI + +A L+ Sbjct: 155 LFLYYGASAMKDMKNLKDALCLLKQAIEKNDAFIPARLLRARILIDLERYEEATQDLD-- 212 Query: 287 WKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 W PE + +L ++ L ++ + E ++ + ++ G Sbjct: 213 WVAASDPEEEQVPMLRARLFMLEGKQQNAIQAYEELLSLDPFNEEGHCGIATLMIKEGRS 272 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKILYWTQSALHAM 389 +A A++ P + +L+ +I + + W A Sbjct: 273 AEAETFLREAIEEMPVQRNLILMLVEILENKGQTQEAA-EWRAKLPEAE 320 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 E V +L ++ + E + A + E +L + E + + G A+ + Sbjct: 219 PEEEQVPMLRARLFMLEGKQQNAIQAYEELLSLDPFNEEGHCGIATLMIKEGRSAEAETF 278 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 +A++ P + +V+ + A Sbjct: 279 LREAIEEMPVQRNLILMLVEILENKGQTQEA 309 >gi|269137473|ref|YP_003294173.1| uncharacterized enzyme of heme biosynthesis [Edwardsiella tarda EIB202] gi|267983133|gb|ACY82962.1| uncharacterized enzyme of heme biosynthesis [Edwardsiella tarda EIB202] gi|304557546|gb|ADM40210.1| HemY protein [Edwardsiella tarda FL6-60] Length = 399 Score = 60.3 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 117/391 (29%), Gaps = 21/391 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ML+++ F ++ I +++ + V I + TS ++ +L + L Sbjct: 1 MLKVLLLFIILIAGIVLGPMLAGHQGYVLIQTDSYNIETSVTSLVIMLILLMLVLFALEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R L A R + + GL+ + + K+ + + Sbjct: 61 LLRRLLRTGARTRGWFMGRKRTRARRQTRAGLLKLTEGDYGQVEKLLARNADHA--DQPL 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNS 172 + YLL + A A++ LE + + TR G+ ++ Sbjct: 119 VNYLLAAEAAQQRGDELRANQYLERAAEVAGSDPLPVDITRV-------RLQLARGENHA 171 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAIL 228 A+ L+ +P P V Q Y+ + + L K + + + Sbjct: 172 ARHGVDALLNYAPRHPEVLRLAEQAYLRTDAFGPLLEILPTLAKQGLHSDDDIEKLQIRA 231 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I + G + + + A+ LI + A+ I+ K Sbjct: 232 YIGLMDQAMANGGSEGLKQWWKAQARKTRHETALQVALAEHLIECDDHGAAQQIVVDGLK 291 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + L S N K + + S + ++ + G QA Sbjct: 292 RRFDERLVQLMPRLKSGNPEQLEKLLQQQIRQHGASALLNSTLGQLLMRHGEWQQAAEAL 351 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 A+K P + LA + Sbjct: 352 RAALKQRPDAYDYAWLADTLDKLHRPEEAAQ 382 >gi|269102379|ref|ZP_06155076.1| putative N-acetylglucosaminyl transferase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162277|gb|EEZ40773.1| putative N-acetylglucosaminyl transferase [Photobacterium damselae subsp. damselae CIP 102761] Length = 389 Score = 60.3 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 88/277 (31%), Gaps = 47/277 (16%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A K+H + + T L + + ++ A + +L P R+ Sbjct: 83 GEVERAIKIHQNLIARPNLTIEQRNLSLQQLAKDYMVAGLFDRAEKIFGQLLDEPDYRKS 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + ++ Y +EW +AI +Q Sbjct: 143 AL----------------------------------QQLLNIYQRTREWEKAIDMASQLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K + ++ A ++ + + D ++L + + AS+ A+ I Sbjct: 169 KMGEAKLKHDIAHYWCELAMIELGAQNPDKAIQDIKKALSVDKQCVRASLMMARIHIQNQ 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + ++A LEK+ + P + Y SE+T LK E + L Sbjct: 229 EYKQAIKYLEKVIDQDIDFVGEALPLLLECYQATNSESTW--LKYLQLCVERKVGATAEL 286 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLL 364 ++ +IA A ++ P + L+ Sbjct: 287 MLADEIA-HREGPVMAQTFMTRQLQKNPTMRGFYQLM 322 >gi|218246150|ref|YP_002371521.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] Length = 878 Score = 60.3 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 13/234 (5%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A + +Q+ A +L + G L A KA+ ++P+ Sbjct: 208 ALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLA 267 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + N A + +L D+G + Sbjct: 268 EAYNNLGVALSDQGKRDEAIAAYQKAIQLNP--NLAEAYNNLGVALS--DQGKRDEAIAA 323 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ++++L N +A +L Q K+ +A +K ++N P A Y +L Sbjct: 324 YQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLN--PNFALAYNNL-GVALS 380 Query: 309 GKLKRALRLEE------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + KR + +N + + G D+A A A+++ P Sbjct: 381 DQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDP 434 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 84/236 (35%), Gaps = 11/236 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A +Y A ++++ A +L G L+ A KA+ ++P Sbjct: 35 QGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNP 94 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + AI + + + A + +L D+G + + Sbjct: 95 NDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNY--ADAYYNLGIALS--DQGKLEEA 150 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS- 304 ++++L N A +L Q K +A +K ++N P A+ Y +L + Sbjct: 151 IAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLN--PNYADAYYNLGNA 208 Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + +++ + + + G +++A A A+++ P Sbjct: 209 LFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 83/241 (34%), Gaps = 19/241 (7%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A + +Q+ A +L G + A KA+ ++P+ Sbjct: 412 ALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFA 471 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + + A+ +D+G + Sbjct: 472 LAYNNLGNALYSQGKREEAIAAYQKAIQLNPNF----ALAYNNLGNALSDQGKRDEAIAA 527 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---- 304 ++++L N +A +L Q K +A +K ++N P A Y +L + Sbjct: 528 YQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLN--PNFALAYNNLGNALKD 585 Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLAMKIA 355 + ++AL L E + + ++ L G +++A + A+KI Sbjct: 586 QGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQGKLEEALREYEAALKID 645 Query: 356 P 356 P Sbjct: 646 P 646 >gi|268319591|ref|YP_003293247.1| TPR repeat-containing protein [Lactobacillus johnsonii FI9785] gi|262397966|emb|CAX66980.1| TPR repeat-containing protein [Lactobacillus johnsonii FI9785] Length = 419 Score = 60.3 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 93/253 (36%), Gaps = 10/253 (3%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A + Sbjct: 62 FPKEDLFKVYLAEILLNDGDEDDGLQLLYDVKPDSDAYLESLLDLADYYQSNGLIETAHQ 121 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A ++P + + + L+ ++S A+ + KN K + ++L R Sbjct: 122 KLLEAHKLAPSEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFGE---VVLSQRIAA 178 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 K + I+S + SI A A ++S N + A L+++ + P Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 238 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296 Query: 351 AMKIAPRKEIFLL 363 +++AP L Sbjct: 297 GLEVAPDNSDLRL 309 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 69/191 (36%), Gaps = 15/191 (7%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + +E + ++ Y+ A + + + T + S R Sbjct: 121 QKLLEAHKLAPSEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT-----FGEVVLSQR 175 Query: 167 IGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE 220 I + +A + +A+ + + A + AI +L+Q + + Sbjct: 176 IAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPD 235 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +L A + E+ ++ +++ + + +L + AK+ + N+ +AE Sbjct: 236 YVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLDEAE 291 Query: 281 VILEKIWKVNP 291 +L+K +V P Sbjct: 292 RLLKKGLEVAP 302 >gi|158521286|ref|YP_001529156.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158510112|gb|ABW67079.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] Length = 879 Score = 60.3 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 88/276 (31%), Gaps = 16/276 (5%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATR---EFAVYSLYFESC 165 + + + + + A +L+ P V+ Sbjct: 448 AATLKMGLDYPETRFNLARTLFYKGDHEAAIRYYTDLLENSPEISPKLLVDVHYDMAMIL 507 Query: 166 RIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 D +A+ + AL++ P P + A+++ +AI ++ ++ Sbjct: 508 VHRDQIEAAETHLRAALELKPFFPEGYNDLGVLLRRAEQFDKAIDAFSEALAMKPDYAEA 567 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVI 282 R L ++ + Y+ + + + ASI +++ A+ Sbjct: 568 R-YNLAQVLYDSGQAEKAMVHYNFLVHDETTGPDLL-ASIHNDLGVIYTRRHELEVAKDH 625 Query: 283 LEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L + + P H + + ++T L+ R ++ + E+ ++ ++ E Sbjct: 626 LSRALCLAPDSPMFHNNLGLLMIKAGRKSTA--LESFSRAVVLDPDYAEARYQLALLSAE 683 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 G A + + AP + LLA + + Sbjct: 684 TGDTAAAVSHYNYILSNAPAADNVNLLADVYNGMGN 719 Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 26/279 (9%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPAT--REFAVYS--LYFESCRIGDLNSAQRYATKALD 182 Q+ Q A ++ T A L R +L A+ + ++AL Sbjct: 572 AQVLYDSGQAEKAMVHYNFLVHDETTGPDLLASIHNDLGVIYTRRHELEVAKDHLSRALC 631 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++PD+P + + A S A+ ++ ++ R +L +A+ GD Sbjct: 632 LAPDSPMFHNNLGLLMIKAGRKSTALESFSRAVVLDPDYAEAR----YQLALLSAETGDT 687 Query: 243 IASYHDAIESLKLCDNSIMASICA------AKSLISQNKKRKAEVILEKIWKVNP----- 291 A+ L + ++ A QN+ +KA + + P Sbjct: 688 AAAVSHYNYILSNAPAADNVNLLADVYNGMGNIYAEQNQTKKAIYYFKHALALKPDFAEV 747 Query: 292 HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 H +A L + + RA I E+ + G+ D+A Sbjct: 748 HNNMALTLLSLNRRQKAIDHFTRA---LAIQPGFTEAANSLVLTYSAAGAYDKALTVLKN 804 Query: 351 AMKIAPR--KEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + AP I +A I + + + W A+ Sbjct: 805 LLAAAPDSAASISYNIACI-HSIRGDLENAATWLNRAID 842 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 30/214 (14%) Query: 133 ERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD----- 186 + + A E ++ P E Y L S GD +A + L +P Sbjct: 650 AGRKSTALESFSRAVVLDPDYAEA-RYQLALLSAETGDTAAAVSHYNYILSNAPAADNVN 708 Query: 187 -APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 V + Y + +AI + ++ A + +L + Sbjct: 709 LLADVYNGMGNIYAEQNQTKKAIYYFKHALALKPDF----AEVHNNMALTLLSLNRRQKA 764 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IY 299 +L + A+ + + KA +L+ + P+ A Sbjct: 765 IDHFTRALAIQPGFTEAANSLVLTYSAAGAYDKALTVLKNLLAAA--PDSAASISYNIAC 822 Query: 300 THLLSEN----------TVGKLKRALRLEEINKE 323 H + + + + R RL E + + Sbjct: 823 IHSIRGDLENAATWLNRAIDRGLRLQRLLETDPD 856 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 10/137 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE------VQIALAERQYNIAHEKLE 144 L+S + A ++Y+ + V LL I + Q A + Sbjct: 678 ALLSAETGDTAAAVSHYNYILSNAPAADN--VNLLADVYNGMGNIYAEQNQTKKAIYYFK 735 Query: 145 -MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P E ++ + A + T+AL I P ++V Y A Sbjct: 736 HALALKPDFAEV-HNNMALTLLSLNRRQKAIDHFTRALAIQPGFTEAANSLVLTYSAAGA 794 Query: 204 WSRAITFLNQKKKNAKE 220 + +A+T L A + Sbjct: 795 YDKALTVLKNLLAAAPD 811 >gi|238650779|ref|YP_002916634.1| hypothetical protein RPR_04595 [Rickettsia peacockii str. Rustic] gi|238624877|gb|ACR47583.1| hypothetical protein RPR_04595 [Rickettsia peacockii str. Rustic] Length = 334 Score = 60.3 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 85/262 (32%), Gaps = 15/262 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ F + + V I+ + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGFTFIESFDSKVFISLYDYNIETTLFFSLILGLLLLISCFIVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P+ + ++ KR + AL +++ A + K S + +E Sbjct: 61 FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFA--EYIMNNKATSASIARKNLSSED 115 Query: 121 LV------YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L L+ + + ++ + +L A+ Sbjct: 116 LKDSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEKAE 172 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARS 233 YATKA + + +++ Y W++ I N+ K + E A + + Sbjct: 173 NYATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAA 232 Query: 234 LENADKGDMIASYHDAIESLKL 255 + + + + ++ L Sbjct: 233 KQEVESNNTANAIDYLATAVDL 254 >gi|220907898|ref|YP_002483209.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219864509|gb|ACL44848.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 689 Score = 59.9 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 80/243 (32%), Gaps = 14/243 (5%) Query: 121 LVYLLEVQIAL--AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L LL Q + A + + +LQ + A+ L + + GD+ +A Y Sbjct: 4 LQKLLT-QAYRHYQAGELAEASQLYQRVLQQHPGQLDALQVLGMIAAQQGDVETAISYFR 62 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 +A+ ++P + + + AI Q K NRN + Sbjct: 63 QAVQVAPAQADLHYNLGYALEAWGDGPAAIAAYQQALK----LNRNHLAACYNLGELHLQ 118 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HP 293 +G+ + +++L + +A +L Q + A + ++ P H Sbjct: 119 RGEYAGAIPCFQWAIQLQPDLSLAHYKLGTALQQQGDPKAAVSCYLQALQLQPDLVVAHC 178 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + Y L + ++ + +L + + +A A ++ Sbjct: 179 NLGSAYLDLGQLEAA--ITAFQSALQLQPDHTGALFNLGLARQTQQQMREAIACYEKVIQ 236 Query: 354 IAP 356 + P Sbjct: 237 LEP 239 Score = 45.3 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 6/182 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A Q H L L + ++Q A E ++Q+ Sbjct: 188 GQLEAAITAFQSALQLQPDHTGALFNLGLAR--QTQQQMREAIACYEKVIQLEPQNSEVY 245 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L +G A A + PD + + + + +W+ A ++ Sbjct: 246 NNLGNAYLAVGQPERAIDVFRWATALKPDDLTLWYNLGKTLLEQADWTGAAACF----RH 301 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 N + + + +GD+ A+ ++LKL + A A +L+ + Sbjct: 302 VLALNPQLSYIHVLLGSALVGQGDLPAASAAYQQALKLDPELVAAHHGIASALLESGEVD 361 Query: 278 KA 279 A Sbjct: 362 AA 363 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 68/250 (27%), Gaps = 17/250 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREF 155 + A Y+ + + + L Q A + LQ+ T Sbjct: 154 GDPKAAVSC--YLQALQLQPDLVVAHCNLGSAYLDLGQLEAAITAFQSALQLQPDHTGAL 211 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 L ++ + + A K + + P V + Y+ + RAI Sbjct: 212 FNLGLARQTQQQ--MREAIACYEKVIQLEPQNSEVYNNLGNAYLAVGQPERAIDVFRWAT 269 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + L ++ D + L L + +L+ Q Sbjct: 270 ALKPD----DLTLWYNLGKTLLEQADWTGAAACFRHVLALNPQLSYIHVLLGSALVGQGD 325 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A ++ K++P H IA+ + L L + ++ E + Sbjct: 326 LPAASAAYQQALKLDPELVAAHHGIASALLESGEVDAA--LLHYNHLCHLQPDNAEFSLN 383 Query: 331 VSKIALEMGS 340 + L G Sbjct: 384 RATALLLKGD 393 >gi|28868247|ref|NP_790866.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato str. DC3000] gi|28851484|gb|AAO54561.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato str. DC3000] Length = 1230 Score = 59.9 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 98/319 (30%), Gaps = 60/319 (18%) Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156 A + ++ N L L E + A+ Q A L + Q P R Sbjct: 266 RATRQQGGARWKNALENVQLWTSLQEARDLQAKGQTGKAQALLAQAQRQNPDNIDVRLT- 324 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213 L + G L++AQ + L P ++ + A+ L+ Sbjct: 325 ---LADVQVQAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 381 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + R +A+ + +GD+ A+ +++K +++ A+ + Sbjct: 382 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQVALKDAVKNDPDNVWTRFDLARLYLK 441 Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298 ++ KA +++++ K P P++ + Sbjct: 442 TDEAPKARALIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFTRIPVDQRTPDMKAL 501 Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + L RL+ + S E + ++ ++ G + Sbjct: 502 ADEVTMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLASAYIDAGEPARGR 561 Query: 346 AKAMLAMKIAPRKEIFLLL 364 A A+ AP L+L Sbjct: 562 EMARAAIAQAPLPSADLML 580 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 92/298 (30%), Gaps = 62/298 (20%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLY 161 R+ H+ + + + L+ L + + A E L+I + Sbjct: 194 RQQHASGAASGWQQDPLVARGLKA---LEKNDHVAAEEAFAARLKIKADDANVLGGLGVV 250 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPW--------VTEAVVQQY--VLAKEWSRAITFL 211 + L A++ T+A A W + ++ + + +A L Sbjct: 251 RQQQNR--LPEAEQLLTRATRQQGGARWKNALENVQLWTSLQEARDLQAKGQTGKAQALL 308 Query: 212 NQKKKNAKE--------------WNRNRAILLIARSLENADKGDM---------IASYHD 248 Q ++ + + A R + +G+ +A Sbjct: 309 AQAQRQNPDNIDVRLTLADVQVQAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQ 368 Query: 249 AIESLKLCDNSIMA---------------SICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 A E+L+L D S A+ + R A+V L+ K +P Sbjct: 369 ADEALRLLDTLSPGEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQVALKDAVKNDPDN 428 Query: 294 -----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 ++A +Y L ++ L + ++++L + +++EMG A Sbjct: 429 VWTRFDLARLY--LKTDEAPKARALIDELLKAQPNNIDALYTSALLSVEMGQWQDAQT 484 >gi|297569750|ref|YP_003691094.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2] gi|296925665|gb|ADH86475.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2] Length = 787 Score = 59.9 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 97/276 (35%), Gaps = 12/276 (4%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L L++ ++ + E + + A L +++ Y G+ + + K Sbjct: 360 PLGSLVQARLLVNEGKNDEAITILSRLVRDHPRWGEPFYVKAQAHFNKGENELSHQDVEK 419 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P + Q ++ A + N RA +++ + + ++ Sbjct: 420 AVRLIPRHAGARTLLAQHLFQQRDLDGARNEALVALQLQP--NNFRAAIILGQVFQRNNE 477 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIAN 297 D + L +++ + +++ + R+A I E+I P P +A+ Sbjct: 478 LD--EALQLFTRMNSLLPDNLEVLHNLGVTHLARQEHREAATIFEEILSKRPDFTPALAS 535 Query: 298 IYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + ++R E + +++ ++ L D A A ++ P Sbjct: 536 LVAIKMQQRDLDAAIERVTAQIEKAPNQADYRLLLGELHLAGNDFDAAITALRQAQELDP 595 Query: 357 RK-EIFLLLAQI-EQANSHNTDKILYWTQSALHAMP 390 +LL+A++ + + Y AL A Sbjct: 596 AALRPYLLIARLMTETGRTDEAIAEY---RALLAKR 628 Score = 40.3 bits (93), Expect = 0.64, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 13/273 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ +A A + + + L L+ I + +R + A E++ ++ Sbjct: 503 GVTHLARQEHREAATIFEEILSKRPDFTPALASLVA--IKMQQRDLDAAIERVTAQIEKA 560 Query: 151 ATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + L E D ++A +A ++ P A + + AI Sbjct: 561 PNQ-ADYRLLLGELHLAGNDFDAAITALRQAQELDPAALRPYLLIARLMTETGRTDEAIA 619 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 E R L ++ KGD + E L N A+ A Sbjct: 620 EYRALLAKRPELTPARMNL----AVLLQQKGDDAGAMAAYREILARAPNFAPAANNLAWL 675 Query: 270 LISQNKK--RKAEVILEKIWKVNPH-PEIANI--YTHLLSENTVGKLKRALRLEEINKES 324 L + K A + + P P +A+ H L + +++ + ++ Sbjct: 676 LAHEPKPDLGAALRLAMLAKEQAPTDPYVADTLGLIHYLRGSHDLAIRQLSQAAAALPDN 735 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +++ G+ +A + +++ Sbjct: 736 PTIGYHLARALRAAGNKKEAEEELQRTLQLDND 768 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 84/271 (30%), Gaps = 19/271 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184 + Q + + ++H+ +E R +L + + DL+ A+ A AL + Sbjct: 400 KAQAHFNKGENELSHQDVEK-AVRLIPRHAGARTLLAQHLFQQRDLDGARNEALVALQLQ 458 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGD 241 P+ + Q + E A+ + + E N + +AR + Sbjct: 459 PNNFRAAIILGQVFQRNNELDEALQLFTRMNSLLPDNLEVLHNLGVTHLARQ-------E 511 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANI 298 + E L + A + Q A + + P+ + Sbjct: 512 HREAATIFEEILSKRPDFTPALASLVAIKMQQRDLDAAIERVTAQIEKAPNQADYRLLLG 571 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 HL + + + +E++ ++ ++++++ E G D+A A+ + P Sbjct: 572 ELHLAGNDFDAAITALRQAQELDPAALRPYLLIARLMTETGRTDEAIAEYRALLAKRPEL 631 Query: 359 EIFLLLAQIEQANSHNTDKI----LYWTQSA 385 + + + A Sbjct: 632 TPARMNLAVLLQQKGDDAGAMAAYREILARA 662 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 92/267 (34%), Gaps = 10/267 (3%) Query: 106 MHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + V +Q + L ++LL+ QI LA +Q A L+ L +P +L Sbjct: 174 RAAAVVEQALASHPELDRLHLLQSQIYLARQQPAAAEAALQKALALPPADIGKHRALASF 233 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 N A+ +A PD+P + Y +E + T A Sbjct: 234 YLNQNQANKAEAQLRQAAAAFPDSPAPHLDLAVIYAQRQELDKVETSFADALAAAP---- 289 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + + ++G + + E+L + A +Q + +A ++ Sbjct: 290 HNPDIYLRLGAFYREQGRLEQAEAAYQEALTKTEAKADIRAQLADLYFNQRQTEQAAALV 349 Query: 284 EKIWKVN-PHP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 E++ + N HP + + + RL + E + ++ G Sbjct: 350 EQVLQENRRHPLGSLVQARLLVNEGKNDEAITILSRLVRDHPRWGEPFYVKAQAHFNKGE 409 Query: 341 IDQAHAKAMLAMKIAPR-KEIFLLLAQ 366 + +H A+++ PR LLAQ Sbjct: 410 NELSHQDVEKAVRLIPRHAGARTLLAQ 436 >gi|188994776|ref|YP_001929028.1| hypothetical protein PGN_0912 [Porphyromonas gingivalis ATCC 33277] gi|188594456|dbj|BAG33431.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 333 Score = 59.9 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%) Query: 174 QRYATKALDI-------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + +AL P + + + SRA+ ++ E +A Sbjct: 92 RHLTEEALAQMNLLLEEVPMHTATLLNRAKLRLEQNDPSRALEDCGTGIESTSELE-EQA 150 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L + D ++ + ++++ D I A + A+ LI + +A L+ Sbjct: 151 LFLYYGASAMKDMKNLKDALCLLKQAIEKNDAFIPARLLRARMLIDLERYEEATQDLD-- 208 Query: 287 WKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 W PE + +L ++ L ++ + E ++ + ++ G Sbjct: 209 WVAASDPEEEQVPMLRARLFMLEGKQQNAMQAYEELLSLDPFNEEGHCGIATLMIKEGRS 268 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKILYWTQSALHAM 389 +A A++ P + +L+ +I + + W A Sbjct: 269 AEAETFLREAIEEMPVQRNLILMLVEILENKGQTQEAA-EWRAKLPEAE 316 >gi|157828589|ref|YP_001494831.1| hypothetical protein A1G_04045 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933303|ref|YP_001650092.1| tetratricopeptide repeat family protein [Rickettsia rickettsii str. Iowa] gi|157801070|gb|ABV76323.1| hypothetical protein A1G_04045 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908390|gb|ABY72686.1| tetratricopeptide repeat family protein [Rickettsia rickettsii str. Iowa] Length = 334 Score = 59.9 bits (144), Expect = 8e-07, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 85/260 (32%), Gaps = 11/260 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ F + + V I+ + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGFTFIESFDSKVFISLYDYNIETNLFFSLILGLLLLISCFIVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116 + P+ + ++ KR + G AL +++ A + A +S + Sbjct: 61 FLILIIDLPSKIHNIFSKRKINHGRYAL---ILAFAEYIMNNKAKSASIARKNLSSEDLK 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ L+ + + ++ + +L A+ Y Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEKAENY 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235 ATKA + + +++ Y W++ I N+ K + E A + + Sbjct: 175 ATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAVKQ 234 Query: 236 NADKGDMIASYHDAIESLKL 255 + + + ++ L Sbjct: 235 EIESNNTANAIDYLATAVDL 254 >gi|118082951|ref|XP_416374.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 944 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 82/270 (30%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L G A ++ PD Sbjct: 588 LTKDVVEAKDYYRRALQLNPQHNRALFNLGNLLKSQGKKEEAVILLRDSIKYGPDFADAY 647 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + A +N E + L + D G + + Sbjct: 648 SSLASLLAEQERLKEAEEVYKAGIENCPESSD----LHNNYGVFLVDTGAPERAVSHYRQ 703 Query: 252 SLKLCDNSIMASICAAKSLISQNKKR-------KAEVILEKIWKVNPHPEIANIYTHLLS 304 ++ L +A + + S + + +A + K ++P + +Y + + Sbjct: 704 AIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVSRKAEILSP---LGALYYN--T 758 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLL 363 L+ + + E+ + ++++ MG +A + E + L Sbjct: 759 GRYEEALQVYREAASLQPSNKETRLALAQVLAMMGRTKEAEKMTNHVLDEDVECLECYRL 818 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H K L AL DP Sbjct: 819 LSAIYSKQEH-YAKALEAIDKALQLKPKDP 847 Score = 43.4 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 14/165 (8%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L LL Q + A E + ++ ++ Y ++ G A + Sbjct: 649 SLASLLAEQ-----ERLKEAEEVYKAGIENCPESSDLHNNYGVFL--VDTGAPERAVSHY 701 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ +SP + + + + A + + K + +A +L Sbjct: 702 RQAIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVS-----RKAEILSPLGALYY 756 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + G + E+ L ++ + A+ L + ++AE + Sbjct: 757 NTGRYEEALQVYREAASLQPSNKETRLALAQVLAMMGRTKEAEKM 801 >gi|302039090|ref|YP_003799412.1| hypothetical protein NIDE3812 [Candidatus Nitrospira defluvii] gi|300607154|emb|CBK43487.1| conserved protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 723 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 100/272 (36%), Gaps = 20/272 (7%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA 151 +++ A + A + ++ L+ L I A+++ A E E + P+ Sbjct: 139 LALGADRVSDAIGLLKQAAELDPTMVRPLLAL--ANIYFAQQELRQAAEWYERALKVAPS 196 Query: 152 TREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + V + + G ++ KA+++SPD V + +YV A Sbjct: 197 SADVRVARGHFLFA--TGTPEEGRKEFQKAVELSPDQEHVRLVLADRYVALGRRDGAERE 254 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L+ + +A+ + + + + S +E+ + + + Sbjct: 255 LSGLVADMNSHKARKALAELKLAAGQVAETKPVVS--AILEADEHDP---VGIYLKGRIA 309 Query: 271 ISQNKKRKAEVILEK-----IWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKES 324 +++N +A + E+ PH + ++ L+ A+RL ++ Sbjct: 310 LAENDVPQAVGLFEESIGRNATLSGPHLYLGLARLAQGRVDSAQEALREAIRL---QPDN 366 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + ++K+ L +A +A A+++ P Sbjct: 367 EAAHLTLAKLYLAQQKQAEAEKEAWQALRLNP 398 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 12/252 (4%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 Y + + ++ + A + L ++Q+ T A +SL G Sbjct: 51 YKNAARATPDNPAIHWKLAKAASQVGDPSTIFTSLSRVVQLDPTDFDAQWSLGDFYLAAG 110 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A + A L P + A S AI L Q + R Sbjct: 111 KTDEAAKLAESLLAARPQHSAGYLLRAGLALGADRVSDAIGLLKQAAELDPTMVRP---- 166 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+A + + ++ + +LK+ +S + L + + +K + Sbjct: 167 LLALANIYFAQQELRQAAEWYERALKVAPSSADVRVARGHFLFATGTPEEGRKEFQKAVE 226 Query: 289 VNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++P E +A+ Y L + + L ++ ++++ L G + + Sbjct: 227 LSPDQEHVRLVLADRYVALGRRDGAER--ELSGLVADMNSH-KARKALAELKLAAGQVAE 283 Query: 344 AHAKAMLAMKIA 355 ++ Sbjct: 284 TKPVVSAILEAD 295 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 88/302 (29%), Gaps = 25/302 (8%) Query: 74 HMLHKRNYDKGYKALYTGLMS-IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV----- 127 + D + L GL++ + +H A + Q + +LE Sbjct: 241 RYVALGRRDGAERELS-GLVADMNSHKARKALAELKLAAGQVAETKPVVSAILEADEHDP 299 Query: 128 -------QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 +IALAE A E + AT L G ++SAQ +A Sbjct: 300 VGIYLKGRIALAENDVPQAVGLFEESIGRNATLSGPHLYLGLARLAQGRVDSAQEALREA 359 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + PD + + Y+ ++ + A Q + A +L + Sbjct: 360 IRLQPDNEAAHLTLAKLYLAQQKQAEAEKEAWQALRLNPA--NLEAAVLYGDAFVLGKNW 417 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEI 295 + AI ++ + + A Q + +A + + P+ + Sbjct: 418 AKADEVYGAI--VRQFPGQPIGYVKMATLRKVQGQSAEAAQLFSQALSYAPNDLVILQDY 475 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 E + + ++ + DQA A+++A Sbjct: 476 LVALVESKQEPRADAV--LKEYLSKASRDPNLWRLAGRLYVSQRKTDQAEKAFKKALELA 533 Query: 356 PR 357 P Sbjct: 534 PD 535 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 5/175 (2%) Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E RA +R + + + + + ++ AK+ Sbjct: 22 EAPSERAAKHESRGDGYVQQEKFREAVIEYKNAARATPDNPAIHWKLAKAASQVGDPSTI 81 Query: 280 EVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L ++ +++P A +L + T K A L + ++ + +AL Sbjct: 82 FTSLSRVVQLDPTDFDAQWSLGDFYLAAGKTDEAAKLAESLLAARPQHSAGYLLRAGLAL 141 Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + A A ++ P L LA I A + W + AL P Sbjct: 142 GADRVSDAIGLLKQAAELDPTMVRPLLALANIYFAQ-QELRQAAEWYERALKVAP 195 >gi|301117834|ref|XP_002906645.1| Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4] gi|262107994|gb|EEY66046.1| Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4] Length = 1104 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 93/274 (33%), Gaps = 22/274 (8%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAVY 158 +A+ M + T + L + L + + A E + L++ T Sbjct: 818 VAKDMEAEG---LTVEDRALAFNLHASLLYVVGDVHTAIEAINKSLELQPTLVNSLVKKG 874 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 E +G+ + A ++A+++ + V + Q +L + +A L + + Sbjct: 875 GFLAE---LGETDEATSCFSEAMELDSNEADVHLHLGQMELLDGNYYKAAQCLRRCISRS 931 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + ++ + G + E+ K+ S + + L Q Sbjct: 932 DALP----VTHVSYGMALYKSGSTYQAKDVFEEASKMFPKSAEVHLFYGEVLADQGNYAN 987 Query: 279 AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A W+++P P + ++ + + + + + E++ + + ++++ Sbjct: 988 AMRHFLTAWELSPQCPLPFLNAGRVYVGTNDPMRAIAHFKQALEVDPRCSSAHLDIAQVL 1047 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 G D+A +A L ++E+ Sbjct: 1048 FAQGRTDEAFEHFEVA------ASCCRFLPEVEE 1075 >gi|293359079|ref|XP_002729487.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 1 isoform 1 [Rattus norvegicus] Length = 773 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 417 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 476 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 477 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 532 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 533 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 587 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + + + ++++ MG +A + PR E + L Sbjct: 588 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 647 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H +K L + AL DP Sbjct: 648 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 676 >gi|196014608|ref|XP_002117163.1| hypothetical protein TRIADDRAFT_51004 [Trichoplax adhaerens] gi|190580385|gb|EDV20469.1| hypothetical protein TRIADDRAFT_51004 [Trichoplax adhaerens] Length = 929 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 115/308 (37%), Gaps = 49/308 (15%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ SA++ A Sbjct: 567 RAAYLEKNH-GTKESLEELLQKAVAHCPKAEVLWLMG-AKSKWLSGDIQSARQILALAFQ 624 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E RA L + + A + A++ Sbjct: 625 ANPNSEEIWLAAVKLESENNEDERARILLQKARSTAPTARVFMKSANLEWCLKNLDGALM 684 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L+ +E+ G++ + + +K C S+ + ++ +++ Sbjct: 685 LLKEGIEHYPTFAKFYMMTGQIYEQIGNIDKARESYSDGVKKCPKSVSLWLLSSGLELTK 744 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLV 329 + KA +LE+ NP PE+ + +E +GK A L+ E+ +S + Sbjct: 745 GEVTKARSMLERGRSRNPKCPELWLQAIRVENEHGNKPMGKSLMAKALQ----ENPDSGI 800 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 + ++ A+ M + K++ AMK + + +A++ + S K W A+ Sbjct: 801 LWAE-AIFMETRPVRRTKSLDAMKRCEHDAHVLVAVARLFWSESK-VTKAREWFHRAVKI 858 Query: 389 MPDP--LW 394 PD W Sbjct: 859 DPDNGDAW 866 >gi|271502389|ref|YP_003335415.1| HemY protein [Dickeya dadantii Ech586] gi|270345944|gb|ACZ78709.1| HemY protein [Dickeya dadantii Ech586] Length = 398 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 53/374 (14%), Positives = 114/374 (30%), Gaps = 27/374 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ +L FL A++ + + R A R Sbjct: 21 LAGHQGYVLIQTDNYNIETSVTGLVIMLVLFLLAFLAVEWLLRRVFRTGARTRGWFIGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + L+ + + K+ + + + YLL + A Sbjct: 81 RTRARQQTKAALLKLTEGDYLQVEKLLTRNADHA--EQPVVNYLLAAEAAQQRGDEFRTR 138 Query: 141 EKLEMMLQ--------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + LE + + TR + ++A+ + L+++P P V Sbjct: 139 QYLERAAEIADGDQLPVDITRV-------RIQLTRNEDHAARHGVDRLLEVAPRHPEVLR 191 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIAS 245 Q ++ +S + L +K E + I L+ +++ + G Sbjct: 192 LAEQAFLRTHAYSALLDILPAMRKTRLHDEPSLDELQQRATIGLMDQAMS--EGGSEGLK 249 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 + K + M A + LI + A+ I+ K + + L S Sbjct: 250 QWWKNQPRKARQSLAMQVAMAER-LIVCDDPVTAQDIIIDGLKQQFDYRLVQLLPRLNSG 308 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 K + + + + ++ ++ G QA A+ + P + A Sbjct: 309 QPEPLEKLLRQRLKQHNNDALLHSTLGQLLMKHGEWQQASDAFSAALALRPDAYDYAWCA 368 Query: 366 QIEQANSHNTDKIL 379 D Sbjct: 369 DAFDRLKRPEDAAR 382 >gi|66347873|ref|NP_001018115.1| O-linked N-acetylglucosamine transferase isoform 2 [Danio rerio] gi|56967374|gb|AAW31871.1| O-GlcNAc transferase variant 2 [Danio rerio] Length = 1052 Score = 59.9 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A++L E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A E L++ T ++ +L G++ A + KAL++ P+ Sbjct: 290 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 110/350 (31%), Gaps = 71/350 (20%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEV---QIALAERQ 135 G A TGL +A + + A + H + N ++ LL Q +R Sbjct: 6 GNVADSTGLAELAHREYQSGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 136 YNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + ++ ML + VY G L A + AL + PD Sbjct: 65 AHFSTLAIKQNPMLAEAYSNLGNVY------KERGQLQEAIEHYRHALRLKPDFIDGYIN 118 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI--------- 243 + V A + A+ + + + + + ++L ++ Sbjct: 119 LAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP 178 Query: 244 --------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + H +++ L N + + I+ K I Sbjct: 179 NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEARIF 231 Query: 284 EKIWK-------VNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVI 330 ++ ++P H +A +Y L + + +RA+ L ++ Sbjct: 232 DRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDAYCN 288 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E G++ +A A+++ P + LA I++ + + + Sbjct: 289 LANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQ 338 >gi|74007684|ref|XP_858918.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform 11 [Canis familiaris] Length = 1062 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|62821820|ref|NP_001017359.1| O-linked N-acetylglucosamine transferase isoform 1 [Danio rerio] gi|56967372|gb|AAW31870.1| O-GlcNAc transferase variant 1 [Danio rerio] Length = 1062 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A++L E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A E L++ T ++ +L G++ A + KAL++ P+ Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRVLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|190340092|gb|AAI63923.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Danio rerio] Length = 1046 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A++L E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A E L++ T ++ +L G++ A + KAL++ P+ Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRVLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|83593548|ref|YP_427300.1| sulfotransferase [Rhodospirillum rubrum ATCC 11170] gi|83576462|gb|ABC23013.1| sulfotransferase [Rhodospirillum rubrum ATCC 11170] Length = 656 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 70/222 (31%), Gaps = 13/222 (5%) Query: 133 ERQYNIAHEKL-EMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A L + P + L + R GDL +A + +A+ D Sbjct: 45 AGDDQRARLALDRALALRPRAAEALLLRGLVDQ--RRGDLAAAAEWFRRAIRARKDFADA 102 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + + A+ + A A+ + + D+GD+ + Sbjct: 103 HLNLGSCLIGLGQTEEALRQFGRAVALAPGM----ALAHLNLAQALLDQGDLGRARSAID 158 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI----ANIYTHLLSEN 306 + L +++ + A+ L +Q A E P + A + L Sbjct: 159 RARALAPDALPILLARARILAAQEDYEAAGAAWEDCVARAPGDVLVLNDAANFL-LEDNR 217 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 L R + S E + + + G++D+A A+A Sbjct: 218 VEDSLALYRRAVALAPTSQEVRKNLIRALMTTGALDEAEAEA 259 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 8/169 (4%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 LI + + GD + +L L + A + + A + + Sbjct: 35 LIRAARDWLGAGDDQRARLALDRALALRPRAAEALLLRGLVDQRRGDLAAAAEWFRRAIR 94 Query: 289 VNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + A+ + +L S T L++ R + + + +++ L+ G + + Sbjct: 95 AR--KDFADAHLNLGSCLIGLGQTEEALRQFGRAVALAPGMALAHLNLAQALLDQGDLGR 152 Query: 344 AHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + A +AP I L A+I A W A D Sbjct: 153 ARSAIDRARALAPDALPILLARARILAAQEDYEAAGAAWEDCVARAPGD 201 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 6/197 (3%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A + AR E L LL + A E ++ Sbjct: 43 LGAGDDQRARLALDRALALRPRAAEAL--LLRGLVDQRRGDLAAAAEWFRRAIRARKDFA 100 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A +L +G A R +A+ ++P + Q + + RA + +++ Sbjct: 101 DAHLNLGSCLIGLGQTEEALRQFGRAVALAPGMALAHLNLAQALLDQGDLGRARSAIDRA 160 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + +L+AR+ A + D A+ + + ++ AA L+ N Sbjct: 161 RALAPDA----LPILLARARILAAQEDYEAAGAAWEDCVARAPGDVLVLNDAANFLLEDN 216 Query: 275 KKRKAEVILEKIWKVNP 291 + + + + + P Sbjct: 217 RVEDSLALYRRAVALAP 233 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 26/69 (37%) Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 S E L+ ++ L G +A A+ + PR LLL + + W Sbjct: 30 NSPEGLIRAARDWLGAGDDQRARLALDRALALRPRAAEALLLRGLVDQRRGDLAAAAEWF 89 Query: 383 QSALHAMPD 391 + A+ A D Sbjct: 90 RRAIRARKD 98 >gi|218781014|ref|YP_002432332.1| hypothetical protein Dalk_3174 [Desulfatibacillum alkenivorans AK-01] gi|218762398|gb|ACL04864.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 667 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 86/274 (31%), Gaps = 23/274 (8%) Query: 95 IAAHNIPLARKMHSYVSQQ---HTFHNEY----LVYLLEVQIALAERQYNIAHEKLEMML 147 +AA + + K + L L +A + + Sbjct: 385 LAARDYLNSWKNDREAFMRNLHFYLDYPPSLVGLGNWLTA-----NGYEELAFSRFYKAV 439 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 ++ A Y L GD + A+ + +AL + P A + V A Sbjct: 440 EVDPGYAPAHYYLANALAAQGDYSGAEAHYREALRLKPGAVRALSRLGALLVRMGRPDEA 499 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + L + + + +A +L + D Y ++ L +S A+ A Sbjct: 500 VPLLEKALRADPAGE--EPLTTLAGALASLDMLHQAEKY--YRTAMDLHPDSGAAAQGLA 555 Query: 268 KSLISQNKKRKAEVILEKIW-----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + L+ + +A +LE K H + ++Y + + + + Sbjct: 556 EVLVRTGRPEEAAPLLENNLAMGFNKAESHFSLGDVYLQMR--DYPQAASQFRMAIAEDS 613 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + + L MG +A + A+ + P Sbjct: 614 GLAKAHNSLGAVLLMMGRKQEAMEQFSKALDLDP 647 >gi|238786065|ref|ZP_04630024.1| hypothetical protein yberc0001_36460 [Yersinia bercovieri ATCC 43970] gi|238713041|gb|EEQ05094.1| hypothetical protein yberc0001_36460 [Yersinia bercovieri ATCC 43970] Length = 389 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 86/253 (33%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGFYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W+ AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLVIHQATSDWNNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGIDDLDKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + I++ + K LE++ + P +++ Y HL Sbjct: 203 LKKAASADKQCARVSIMQGRVHIARGEYAKGVEALERVLEQDKEVVSEALPMLSDCYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 R E N + + +++++I + D A ++ P + + Sbjct: 263 QQPQAWANF--LKRCVEDNTGAT-AELMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|329667446|gb|AEB93394.1| hypothetical protein LJP_1071c [Lactobacillus johnsonii DPC 6026] Length = 420 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 10/253 (3%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A + Sbjct: 62 FPKEDLFKVYLAEILLNDGNEDDGLQLLYDVKPDSDAYLESLLDLADYYQSNGLIETAHQ 121 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A ++PD + + + L+ ++S A+ + KN K ++ ++L R Sbjct: 122 KLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFSE---VVLSQRIAA 178 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 K + I+S + SI A A ++S N + A L+++ + P Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 238 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296 Query: 351 AMKIAPRKEIFLL 363 +++AP L Sbjct: 297 GLEVAPDNSDLRL 309 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 70/194 (36%), Gaps = 21/194 (10%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--- 163 + +E + ++ Y+ A + + + T + E Sbjct: 121 QKLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT--------FSEVVL 172 Query: 164 SCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKN 217 S RI + +A + +A+ + + A + AI +L+Q + Sbjct: 173 SQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIET 232 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ +L A + E+ ++ +++ + + +L + AK+ + N+ Sbjct: 233 QPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLD 288 Query: 278 KAEVILEKIWKVNP 291 +AE +L+K +V P Sbjct: 289 EAERLLKKGLEVAP 302 >gi|255553813|ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus communis] gi|223542929|gb|EEF44465.1| pre-mRNA splicing factor, putative [Ricinus communis] Length = 1031 Score = 59.9 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 99/300 (33%), Gaps = 43/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + E L+ +L+ P + E GD+ +A+ +A Sbjct: 662 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 719 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--- 240 P++ + A + E RA L + ++ ++ R L N ++ Sbjct: 720 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNTEEERRL 779 Query: 241 --------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + LK C + I + A N Sbjct: 780 LDEGLKRFPSFFKLWLMLGQLEERIFHLDKAKEVYESGLKHCPSCIPLWLSLANLEEKMN 839 Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332 KA +L K NP PE+ + +E+ G K + L +E S ++ + Sbjct: 840 GLSKARAVLTMARKKNPQNPELWLA--AVRAESRHGNKKESDILMAKALQECPNSGILWA 897 Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 ++EM Q K+M A+K + +A++ + DK W A+ PD Sbjct: 898 -ASIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWHDRK-VDKARTWLNRAVTLAPD 955 >gi|33945209|emb|CAE12014.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense] Length = 231 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +LRLI +S V+ + + S V + W ++ V+L+++ + L Sbjct: 2 LLRLIVLLIFMSPVVFATLWFSDNVGSVQVEWLGWHVDSNMPVLLAVILVVFLIFSALSR 61 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 +S P+ L R +KG AL L + + ++ R+ + + +N Sbjct: 62 LSALVADLPSKLGKSRQARGLEKGMSALLAALDAAESGDVGEGRRFAAEAA--RLLNNPG 119 Query: 121 LVYLLE 126 L L+ Sbjct: 120 LAARLD 125 >gi|78355875|ref|YP_387324.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218280|gb|ABB37629.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 886 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 102/315 (32%), Gaps = 15/315 (4%) Query: 80 NYDKGYKALY---TGLMSIAAHNIPLARKMHSY-VSQQHTFHNEYLVYLLEVQIALAERQ 135 G AL G+++ A + A + VS + T L Q+ L Sbjct: 260 RTRFGDDALVLMLEGMLAYADKDYEAAARAFQRSVSARPTLD--AFFRLGLAQVGL--GD 315 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 A + ++L A + R + AQ A + +++ PD PW + Sbjct: 316 LETALSQFRVVLDKQPQHAEARRMVAATLLRQNRIEDAQAEARRLVEMHPDYPWGHFLLA 375 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + A L+ A A + +S N G + D ++ Sbjct: 376 SAAMARGDMELAARELDVVTSLAPAM----AEAHLQKSYINISSGRFDLAESDLNSAVSA 431 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 +I A + + + + + +AE +L + P + Y + + K Sbjct: 432 SPGNIQARVALFQFNMGRGRFDEAEKVLTEGMNGTPRDAVLWNYIAGMYQLRRDDAKALE 491 Query: 316 RLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 LE+ + +S + S+I G A + ++ P FL+++ + + Sbjct: 492 ALEKAQQADPDLRDSYMTASRIRAAAGDEAGALEQLERYLQRHPDDGRFLVVSAVLLDLT 551 Query: 373 HNTDKILYWTQSALH 387 + K A Sbjct: 552 GDAQKAGARLDRARE 566 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 84/293 (28%), Gaps = 45/293 (15%) Query: 67 SCPAMLFHMLH-KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L L + AL + + + AR M ++ L LL Sbjct: 149 GAEDALRSALQLEPRRISSRLALAR--LYASTGRVDEARTMVGEALAISPADHDSL--LL 204 Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 ++ + + ++A Y + + + G+L++A++ T A + Sbjct: 205 AAELTRYSGDDAAITAAYRTLSEQYPDDKYARYMIGAQEMKTGNLDAARQ--TTAAMRTR 262 Query: 186 DAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +++ K++ A + + L GD+ Sbjct: 263 FGDDALVLMLEGMLAYADKDYEAAARAFQRSVSARPTLD-----AFFRLGLAQVGLGDLE 317 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + L A A +L+ QN+ A+ Sbjct: 318 TALSQFRVVLDKQPQHAEARRMVAATLLRQNRIEDAQA---------------------- 355 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 A RL E++ + +++ A+ G ++ A + + +AP Sbjct: 356 ---------EARRLVEMHPDYPWGHFLLASAAMARGDMELAARELDVVTSLAP 399 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 78/260 (30%), Gaps = 35/260 (13%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ + A + AL+ P A+ Q Y + +A T + + Sbjct: 40 MEQGNSSGAIVFFKSALEKEPQLYEARLALGQAYAAEGKLDQAETAFQKCLRQNASDPEL 99 Query: 225 RAIL----------------------LIARSLENAD--------KGDMIASYHDAIESLK 254 R L L RS E + G+ + +L+ Sbjct: 100 RLALARLYTQLRKSRDTIEHVNAYEGLKGRSAETEELKGIALAMGGNAPGAEDALRSALQ 159 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKL 311 L I + + A+ S + +A ++ + ++P + S + Sbjct: 160 LEPRRISSRLALARLYASTGRVDEARTMVGEALAISPADHDSLLLAAELTRYSGDDAAIT 219 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRKEIFLLLAQIEQA 370 L E + + ++ ++ G++D A A + + + +L + A Sbjct: 220 AAYRTLSEQYPDDKYARYMIGAQEMKTGNLDAARQTTAAMRTRFGDDALVLMLEGMLAYA 279 Query: 371 NSHNTDKILYWTQSALHAMP 390 + Q ++ A P Sbjct: 280 DKDYEAAARA-FQRSVSARP 298 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 8/125 (6%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D A KA PD + A + + A+ L + + + R Sbjct: 483 RRDDAKALEALEKAQQADPDLRDSYMTASRIRAAAGDEAGALEQLERYLQRHPDDGR--- 539 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEK 285 L+ ++ GD + + +L +++ A++ L+S+ + KA +L+ Sbjct: 540 -FLVVSAVLLDLTGDAQKAGARLDRARELDEPSALPATVSR---LMSRGETDKARQLLQD 595 Query: 286 IWKVN 290 + + Sbjct: 596 AYAAS 600 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 87/297 (29%), Gaps = 39/297 (13%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 PA + ++ + DK + L + + L L Sbjct: 573 LPATVSRLMSRGETDKARQLLQDAYAASGS-----------------LRDLSMLTGFLTG 615 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q + + A E A ++ D A A K D+ + Sbjct: 616 Q-----GRTDEALALYEAYAAKDP--VAAARGIFAVHTLKRDYQKALEQARKLSDLEASS 668 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASY 246 P + + + + + +A LLIA++ ++ + Sbjct: 669 PEGALQEAATMERMGD------PAAALARLEEAYRKFQAPQLLIAQASVARRMDNIDKAE 722 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTH 301 LK + + A + AA+ + + +A E+I + P+ A + Sbjct: 723 AYIRTCLKAAPDFVPAKVAAAELAHQRGRLDEAAAAYEEILQRV--PDDAAVMNNLAMIY 780 Query: 302 LLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E T+ + L+ AL +S + + + G +A A + P Sbjct: 781 VRDEATLRRALQLALTAYVRQPDSPQIMDTLGLCLTAAGRPAEAVRVLRRASALLPD 837 >gi|15966522|ref|NP_386875.1| adenylate/guanylate cyclase protein [Sinorhizobium meliloti 1021] gi|15075793|emb|CAC47348.1| Probable adenylate/guanylate cyclase [Sinorhizobium meliloti 1021] Length = 634 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILL 229 A+R KA+++ P+ + + ++W L A + N A Sbjct: 367 ARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLESILDMSARALALDPNLAEAH 426 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +R L G + + +++L L + A++ + L +Q + R+A E+ ++ Sbjct: 427 ASRGLALNHDGQTEEASREFLQALALDPSLYEANLYYGRFLFAQGRFREAIGFFERAAEI 486 Query: 290 N------P-HPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALE 337 P H + Y L E + ++RA E N E+ + Sbjct: 487 RSDDYFSPIH--LMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHRGALALAH 544 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 MG ++A A+ I P + A + ++ L Sbjct: 545 MGEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELL 589 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 23/167 (13%) Query: 133 ERQYNIAHEKL-EMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI------S 184 + Q A + + + P+ E +Y + + G A + +A +I S Sbjct: 436 DGQTEEASREFLQALALDPSLYEANLYYGRFLFAQ--GRFREAIGFFERAAEIRSDDYFS 493 Query: 185 PDAPWVTEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 P + + W+R A + + + +NA +R +L A Sbjct: 494 PIHLMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHR--------GALALAHM 545 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 G+ + +L + + I+A AA + +A +LE + Sbjct: 546 GEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELLETV 592 >gi|74007670|ref|XP_849392.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform 2 [Canis familiaris] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|315187458|gb|EFU21214.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 454 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 91/321 (28%), Gaps = 37/321 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A K S + + LL V + L + A +L +L+ A+ Sbjct: 48 GRPEDAIKAFEEASARA--PEDPETRLLYVNLLLMAGKETEAEAELSRLLEEYPDHVGAL 105 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L G +R + L + P A+ + + K+++RA + Sbjct: 106 YTLALLEGARGREEEHRRLLERVLALDPHHTGARAALGELLLSKKQYARAEKEFTTVLEE 165 Query: 218 -----------AKEWNRNRAI-------------------LLIARSLENADKGDMIASYH 247 + R R R+ + + Sbjct: 166 DPGDLVALVGLGNVYLRTRKAEKAAEVLTQAIRQAPDYPFAYADRARAWQMLDEPEKAEQ 225 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 D +++L A+ LIS+ + +A L + ++P +A +Y + Sbjct: 226 DISRAIELDPGFSWHYYDRARILISEGQMDRALEDLSRAILLDPSNFLAYVY-RARIYDG 284 Query: 308 VGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 +K A R E+ + V + A P + +L Sbjct: 285 KEMMKEACSDYARALELRPDYYYIYVPYAVTLYHEKDYRGAAVYFDKGFDAYPSEYPLIL 344 Query: 364 LAQIEQANSHNTDKILYWTQS 384 LA + + + + Sbjct: 345 LAATAYKRAGDDRMMRDYLTR 365 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 61/313 (19%) Query: 110 VSQQHTFHNEYLVYLLE-------VQIALAE-----RQYNIAHEKLEMMLQIPATREFAV 157 + H L +L + AL E +QY A ++ +L+ A+ Sbjct: 114 ARGREEEHRRLLERVLALDPHHTGARAALGELLLSKKQYARAEKEFTTVLEEDPGDLVAL 173 Query: 158 YSL----------------YFESCRI------------------GDLNSAQRYATKALDI 183 L ++ R + A++ ++A+++ Sbjct: 174 VGLGNVYLRTRKAEKAAEVLTQAIRQAPDYPFAYADRARAWQMLDEPEKAEQDISRAIEL 233 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P W + + + RA+ L++ + + + + R+ K M Sbjct: 234 DPGFSWHYYDRARILISEGQMDRALEDLSRAI----LLDPSNFLAYVYRARIYDGKEMMK 289 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI---ANI 298 + D +L+L + + A +L + R A V +K + P +P I A Sbjct: 290 EACSDYARALELRPDYYYIYVPYAVTLYHEKDYRGAAVYFDKGFDAYPSEYPLILLAATA 349 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y ++ + + R+ +I ++S+ V++ LE + R Sbjct: 350 YKRA-GDDRMMRDYLTRRMPQIPRDSI--YYFVARYYLEGKGDSLVLTRLRDIADKVERT 406 Query: 359 EIFL---LLAQIE 368 ++ ++A+ E Sbjct: 407 RVYFFLGIMAEEE 419 >gi|82701510|ref|YP_411076.1| tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196] gi|82409575|gb|ABB73684.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196] Length = 929 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 13/239 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181 L L + A + L L+ + FA+ E+ + D A Y A Sbjct: 345 LLASALLKNGETKRAIDILTPPLKNVKEDPQLFALAG---EAYMQAKDFAKATEYFEMAS 401 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 DI+P + + A+ + E +RAI+ L K + RA +L+ + + D Sbjct: 402 DIAPRSAMLHTALSMSRLGQGENARAISELETATK--LDPKSPRAGVLLVMTHLRLKEFD 459 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIAN-I 298 + A+E K ++ + + +N A EK + P+ P IAN Sbjct: 460 KALAAVKALE--KENPDNPLIQNLKGGVYLGKNDIANARASFEKALAIQPNYFPTIANLA 517 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + KR + E +K++++++V ++ +A+ G +A AM+ P Sbjct: 518 RLDIQDKKPDAARKRFEAILEKDKKNIQAMVALAGLAVNQGQNQKATEWLERAMQANPD 576 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 82/289 (28%), Gaps = 35/289 (12%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + L L + A E L A+ L S D+ A ++ + Sbjct: 137 AQILTLRGNAQLGLGKTAEAKALFEQALGHNPDSADALIGLAKYSLVQRDVEGATHFSEQ 196 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITF---------------------------LN 212 A+ SP + + A+ Sbjct: 197 AVSRSPQNVEAWLFRGDLLRMQGKSGEALAAYDQVVKLKPNAAIAYINKAFIEIGTGKFE 256 Query: 213 QKKKNAKEWNRNRAILLI--ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K + + L++ ++L + + A+ + L + + + + A Sbjct: 257 AAKADIDAARKISPSLMVFYTQALLDFSQQKPAAALESLQQVLSKSPDHMPSVLLAGAVQ 316 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVES 327 + +AE L+ + +P A L + T + + KE + Sbjct: 317 FALGSMPQAEQHLKHYLEKDPGNIYARKLLASALLKNGETKRAIDILTPPLKNVKEDPQL 376 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQANSH 373 + + ++ +A +A IAPR L ++++ Q + Sbjct: 377 FALAGEAYMQAKDFAKATEYFEMASDIAPRSAMLHTALSMSRLGQGENA 425 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 52/293 (17%), Positives = 96/293 (32%), Gaps = 35/293 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFA 156 A + + H+ + L L Q LA + A E + + P + Sbjct: 592 GEKQKALALAKKLEGTHSKDSAVLDLL--AQAQLANNDKSSALESYARLAVVQPESPLVQ 649 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + +L++A K+L I PD A + + +AI Q +K Sbjct: 650 FR-IASIHMAMRNLSAASDALKKSLAIKPDYLAAQLAQIDIEAEQGNYEKAIAMARQVQK 708 Query: 217 -----------NAKEWNRNRAILLIARSLENA------------------DKGDMIASYH 247 + + L A + E A G + Sbjct: 709 QHKGSPAGYIAEGDLLLKQKKPALAASAYEQAFAVNKTSPLLIKLHASLRQAGKDKEADL 768 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSE 305 IE LK N + A + A + +++ K A + + K P P + N+ T + Sbjct: 769 RLIEWLKKHPNDLSARMYLADTFLTEGKLAAAVEQYQTVLKEQPKFAPALNNLATAYQRQ 828 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L+ A + ++ E+ L + + LE +I +A A +AP+ Sbjct: 829 KDPRALEYAEKAYQLATENPAVLDTLGWVLLEQENIARALPLLQKAASLAPQA 881 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 71/241 (29%), Gaps = 14/241 (5%) Query: 125 LEVQIALA-----ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L Q+A + Y A + + + + A + Sbjct: 680 LAAQLAQIDIEAEQGNYEKAIAMARQVQKQHKGSPAGYIAEGDLLLKQKKPALAASAYEQ 739 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++ +P + + K+ + + KK+ + + + + + Sbjct: 740 AFAVNKTSPLLIKLHASLRQAGKDKEADLRLIEWLKKHPNDLSAR-----MYLADTFLTE 794 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEIANI 298 G + A+ LK A A + Q R A EK ++ +P + + Sbjct: 795 GKLAAAVEQYQTVLKEQPKFAPALNNLATAYQRQKDPR-ALEYAEKAYQLATENPAVLDT 853 Query: 299 --YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L EN L + + ++ E + ++ G+ QA + + Sbjct: 854 LGWVLLEQENIARALPLLQKAASLAPQAGEIRYHFASALVKSGNKSQARKELEQILATGK 913 Query: 357 R 357 Sbjct: 914 T 914 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 93/317 (29%), Gaps = 36/317 (11%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + + + + + L+ L+ + L + A E L I + +L Sbjct: 460 KALAAVKALEKENPDNPLIQNLKGGVYLGKNDIANARASFEKALAIQPNYFPTIANLARL 519 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-- 221 + ++A++ L+ A+ V + +A +L + + + Sbjct: 520 DIQDKKPDAARKRFEAILEKDKKNIQAMVALAGLAVNQGQNQKATEWLERAMQANPDVLQ 579 Query: 222 -------------NRNRAILLI---------------ARSLENADKGDMIASYHDAIESL 253 + +A+ L + D ++ Sbjct: 580 PAILLGTHYLRLGEKQKALALAKKLEGTHSKDSAVLDLLAQAQLANNDKSSALESYARLA 639 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGK 310 + S + A ++ A L+K + P ++A I N Sbjct: 640 VVQPESPLVQFRIASIHMAMRNLSAASDALKKSLAIKPDYLAAQLAQIDIEAEQGNYEKA 699 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 + A ++++ +K S + + L+ A + A + + + L + Sbjct: 700 IAMARQVQKQHKGSPAGYIAEGDLLLKQKKPALAASAYEQAFAVNKTSPLLIKLHASLRQ 759 Query: 371 NSHNTD---KILYWTQS 384 + + +++ W + Sbjct: 760 AGKDKEADLRLIEWLKK 776 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 70/237 (29%), Gaps = 35/237 (14%) Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L ++ R GD SA AL +PD + Y ++ A L + Sbjct: 39 LMADAKRYEESGDHKSAIIQLKNALQQNPDNSEARYLLGAIYNKTGDFQSAEKELRKALS 98 Query: 217 NAKEW-----------------------------NRNRAILLIARSLENADKGDMIASYH 247 + A +L R G + Sbjct: 99 LGMDAGKVLPELGQALLRLGAYQQILDETKELADKTKSAQILTLRGNAQLGLGKTAEAKA 158 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLS 304 ++L +S A I AK + Q A E+ +P A ++ + Sbjct: 159 LFEQALGHNPDSADALIGLAKYSLVQRDVEGATHFSEQAVSRSPQNVEAWLFRGDLLRMQ 218 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + L ++ ++ + + + + I + G + A A A KI+P +F Sbjct: 219 GKSGEALAAYDQVVKLKPNAAIAYINKAFIEIGTGKFEAAKADIDAARKISPSLMVF 275 >gi|238754986|ref|ZP_04616335.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473] gi|238706845|gb|EEP99213.1| hypothetical protein yruck0001_15380 [Yersinia ruckeri ATCC 29473] Length = 389 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 92/254 (36%), Gaps = 21/254 (8%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A+ T+ ++ + Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAIQQLGRDYMAAGLYDRAEDMFTQLIEETEFRIG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W +AI + K K+ R+ A +L+ D+ + + Sbjct: 143 ALQQLLTIHQATSDWLKAIEVAERLVKLGKDRQRSEIAHFYCELALQAMGSDDLDKAMNL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ + SI + I++ KA L+++ + P + + Y HL Sbjct: 203 LKKAANADKDCARVSIMQGRVHIARGDYGKAAEALQQVLEQDKEVVSEALPMLHDCYQHL 262 Query: 303 LSENT-VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI- 360 LKR E N + + +++++I + D A ++ P + Sbjct: 263 QQPRVWADFLKRC---VEDNTGAT-AELMLAEILEQQDGRDVAQVYINRQLQRHPTMRVF 318 Query: 361 FLLL----AQIEQA 370 + L+ A E+ Sbjct: 319 YRLMDYHLADAEEG 332 >gi|301791309|ref|XP_002930623.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 2 [Ailuropoda melanoleuca] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|66347871|ref|NP_001018116.1| O-linked N-acetylglucosamine transferase isoform 3 [Danio rerio] gi|56967376|gb|AAW31872.1| O-GlcNAc transferase variant 3 [Danio rerio] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A++L E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A E L++ T ++ +L G++ A + KAL++ P+ Sbjct: 300 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRVLSFQGLAELAHREYQSGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|330901072|gb|EGH32491.1| HemY [Pseudomonas syringae pv. japonica str. M301072PT] Length = 279 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 11/214 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD + A + P P V + + + +WS + + + +K+ + Sbjct: 30 QDRGDTDGALTTLLAMKERHPHNPQVLRQLQRLHQQRGDWSDVVRLMPELRKDKVLPPKE 89 Query: 225 RAIL----------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQ 273 A L L A S + S A + L + A A L Sbjct: 90 LAELERRAWGENLSLAAYSEGIEGAPTGLPSLESAWQGLGSAQRQEPQLVLAYADQLRRL 149 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 + +AE +L K + +A +Y + + + +L+ A + + L+ + + Sbjct: 150 GAEAQAEEVLRSALKREYNSHLARLYGLVRGTDPLKQLQAAEGWLKHHPADPSLLLSLGR 209 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 I L+ +A ++++ E LA++ Sbjct: 210 ICLQGRLWGKARDYLESSLRMERNPETCAELARL 243 >gi|281337757|gb|EFB13341.1| hypothetical protein PANDA_021118 [Ailuropoda melanoleuca] Length = 1037 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 98 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 155 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 156 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 210 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 211 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 266 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 267 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 326 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 327 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 384 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 291 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 350 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 351 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 406 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 407 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 464 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 465 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 500 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 28/223 (12%) Query: 149 IPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKE 203 P R + L + R GD +A+R+ + PD V + + + Sbjct: 4 EPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLD 63 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 S + L K+ N A ++G + + +L+L + I Sbjct: 64 RSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 117 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 118 INLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKAC 170 Query: 323 --ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 171 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 213 >gi|66347879|ref|NP_001018117.1| O-linked N-acetylglucosamine transferase isoform 4 [Danio rerio] gi|56967378|gb|AAW31873.1| O-GlcNAc transferase variant 4 [Danio rerio] Length = 1036 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A++L E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A E L++ T ++ +L G++ A + KAL++ P+ Sbjct: 290 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 110/350 (31%), Gaps = 71/350 (20%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEV---QIALAERQ 135 G A TGL +A + + A + H + N ++ LL Q +R Sbjct: 6 GNVADSTGLAELAHREYQSGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 136 YNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + ++ ML + VY G L A + AL + PD Sbjct: 65 AHFSTLAIKQNPMLAEAYSNLGNVY------KERGQLQEAIEHYRHALRLKPDFIDGYIN 118 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI--------- 243 + V A + A+ + + + + + ++L ++ Sbjct: 119 LAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQP 178 Query: 244 --------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + H +++ L N + + I+ K I Sbjct: 179 NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEARIF 231 Query: 284 EKIWK-------VNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVI 330 ++ ++P H +A +Y L + + +RA+ L ++ Sbjct: 232 DRAVAGYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDAYCN 288 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E G++ +A A+++ P + LA I++ + + + Sbjct: 289 LANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQ 338 >gi|74007686|ref|XP_538075.2| PREDICTED: similar to O-linked GlcNAc transferase isoform 2 isoform 1 [Canis familiaris] Length = 1036 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|307300441|ref|ZP_07580221.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti BL225C] gi|307318306|ref|ZP_07597741.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti AK83] gi|306895988|gb|EFN26739.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti AK83] gi|306904607|gb|EFN35191.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti BL225C] Length = 629 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 17/225 (7%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILL 229 A+R KA+++ P+ + + ++W L A + N A Sbjct: 362 ARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLESILDMSARALALDPNLAEAH 421 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +R L G + + +++L L + A++ + L +Q + R+A E+ ++ Sbjct: 422 ASRGLALNHDGQTEEASREFLQALALDPSLYEANLYYGRFLFAQGRFREAIGFFERAAEI 481 Query: 290 N------P-HPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALE 337 P H + Y L E + ++RA E N E+ + Sbjct: 482 RSDDYFSPIH--LMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHRGALALAH 539 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 MG ++A A+ I P + A + ++ L Sbjct: 540 MGEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELL 584 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 23/167 (13%) Query: 133 ERQYNIAHEKL-EMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI------S 184 + Q A + + + P+ E +Y + + G A + +A +I S Sbjct: 431 DGQTEEASREFLQALALDPSLYEANLYYGRFLFAQ--GRFREAIGFFERAAEIRSDDYFS 488 Query: 185 PDAPWVTEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 P + + W+R A + + + +NA +R +L A Sbjct: 489 PIHLMGCYLSLGMETERQRWARIGIERAQSAMERNPENASPAHR--------GALALAHM 540 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 G+ + +L + + I+A AA + +A +LE + Sbjct: 541 GEAERAKEWVSRALAIDPDDIVAQYNAACVHSLLGEGERALELLETV 587 >gi|126667425|ref|ZP_01738397.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17] gi|126628181|gb|EAZ98806.1| hypothetical protein MELB17_14201 [Marinobacter sp. ELB17] Length = 809 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 98/299 (32%), Gaps = 18/299 (6%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 + +I A N A+ M + + NE L +L A A + P Sbjct: 288 IAAIQAGNFDEAKTMLRDMRKLD-PDNEQLALMLGTLSAGTGELEEGAELLSGNL--DPE 344 Query: 152 T---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSR 206 T R + + +G+ A +A+ P+ V+ + + + Sbjct: 345 TTPTRF--IRASTMAQIDVGEREEALATLERAVKARPNDNDLLAMHGVLAL-SMPGQEAA 401 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 +T L++ N + R R IA + + + + ++ Sbjct: 402 GVTSLSKAISNEPDRTRLR----IALARHYINNQQTEQALGQLRMAFTTQPADWASTAIY 457 Query: 267 AKSLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 LI + R+AE + L + P + N+ + R +L N Sbjct: 458 LSVLIDSGETREAEDVRDSLINGYGNEPQAVLLAAIADGRMGNSGPAITRLEKLTTDNPN 517 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 + + ++ + + D+A + + A I P L A A++H+ +++ W Sbjct: 518 MQPAHLALANLYASTDNSDKAVEQLLAAAVITPEVIGPLQQAGQLYASNHSVEEVQQWL 576 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L+E + + A + +T A+ L + G+ +A A L Sbjct: 141 LIEAKAMRLSGDVDGAVTAYRDISANYSTSVDAITGLIESHIQQGNARTALGAANDWLAS 200 Query: 184 SPDAPWVTEAVVQQYVLAK----EWSRAITFLNQKKKNAKEWNR---NRAILLIARSLEN 236 T AV+ LA+ E A L + R LL S Sbjct: 201 H----ETTPAVLYLKGLAQYQLDELEPATATLTNAVTGMPTSDMFLPLRGQLLSLLSRVL 256 Query: 237 ADKGDMIASY---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 ++G + + E ++ AA I +A+ +L + K++P Sbjct: 257 TEQGKITEAQVYGRILAEQTDSGAREQGEAVIAA---IQAGNFDEAKTMLRDMRKLDPDN 313 Query: 294 EIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSK--IALEMGSIDQAHAKAML 350 E + LS T + A L ++ E+ + I + +++G ++A A Sbjct: 314 EQLALMLGTLSAGTGELEEGAELLSGNLDPETTPTRFIRASTMAQIDVGEREEALATLER 373 Query: 351 AMKIAPRKEIFLLL 364 A+K P L + Sbjct: 374 AVKARPNDNDLLAM 387 >gi|301791307|ref|XP_002930622.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 1 [Ailuropoda melanoleuca] Length = 1036 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|147899141|ref|NP_001091539.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Bos taurus] gi|146186901|gb|AAI40543.1| OGT protein [Bos taurus] gi|296470806|gb|DAA12921.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Bos taurus] Length = 1036 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|156055314|ref|XP_001593581.1| hypothetical protein SS1G_05008 [Sclerotinia sclerotiorum 1980] gi|154702793|gb|EDO02532.1| hypothetical protein SS1G_05008 [Sclerotinia sclerotiorum 1980 UF-70] Length = 926 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 109/331 (32%), Gaps = 49/331 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIP 150 SI AR +++Y + L A E+ + +++ ++ Sbjct: 537 SINRGKYETARAIYAYALRVFVTS----TKLWLA-AADLEKNHGTKEALWQLLEKAVEAR 591 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T E L E G++++A+R KA + +P+ + A V+ ++ +A Sbjct: 592 PTSEVLWMMLAKEKWLAGEVDNARRVLGKAFNQNPNNEEIWLAAVKLEAENQQPEQAREL 651 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENAD-----------------------------KGD 241 L ++ A + R L N D +G Sbjct: 652 LKTARQEAPTDRVWTKSVAYERQLGNIDAALDLANQGLNLFPGAAKLWMMKGQIYESEGK 711 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300 M + K C S+ + ++ KA +L++ P PE+ Sbjct: 712 MPQAREAYSTGTKACPKSVPLWLLYSRLEERAGMVVKARSVLDRARLAVPKSPELWTESV 771 Query: 301 HLL---SENTVGKLKRALRLEEINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIA 355 + + K+ A L+E+ S ++ ++ LE + + A K+ Sbjct: 772 RVERRTNNTAQAKIMMAKALQEV----PNSGLLYTESIWNLEARTQRKPRA-LEAIKKVD 826 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 +F+ +A+I +K W + A+ Sbjct: 827 NDPILFVTIARIFWGERR-LEKAQNWFEKAI 856 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 7/150 (4%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + ++G + +L++ S + AA + K +LEK + P Sbjct: 534 AKASINRGKYETARAIYAYALRVFVTSTKLWLAAADLEKNHGTKEALWQLLEKAVEARPT 593 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 E +A + ++ + N + E + K+ E +QA Sbjct: 594 SEVLWMMLAKEKWLAGEVDNARRV--LGKAFNQNPNNEEIWLAAVKLEAENQQPEQAREL 651 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 A + AP ++ E+ + Sbjct: 652 LKTARQEAPTDRVWTKSVAYERQLGNIDAA 681 >gi|149758509|ref|XP_001493422.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) isoform 1 [Equus caballus] gi|291407677|ref|XP_002720149.1| PREDICTED: O-linked GlcNAc transferase isoform 2 [Oryctolagus cuniculus] gi|296235743|ref|XP_002763023.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 1 [Callithrix jacchus] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|126342737|ref|XP_001362233.1| PREDICTED: similar to UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl transferase isoform 1 [Monodelphis domestica] Length = 1045 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 54/259 (20%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNR 223 G L A + AL + PD + V A + A+ + + + Sbjct: 100 KERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCV 159 Query: 224 NRAILLIARSLENADKGDMI-----------------------------ASYHDAIESLK 254 + + ++L ++ + H +++ Sbjct: 160 RSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-------NP-----HPEIANIYTH- 301 L N + + I+ K I ++ +P H +A +Y Sbjct: 220 LDPNFL-------DAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQ 272 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360 L + + +RA+ L ++ ++ E GS+ +A A+++ P + Sbjct: 273 GLIDLAIDTYRRAIEL---QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADS 329 Query: 361 FLLLAQIEQANSHNTDKIL 379 LA I++ + + + Sbjct: 330 LNNLANIKREQGNIEEAVR 348 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 >gi|123228956|emb|CAM21281.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Mus musculus] gi|123229896|emb|CAM25748.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Mus musculus] gi|148682190|gb|EDL14137.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_a [Mus musculus] Length = 1036 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 499 >gi|46909607|ref|NP_631883.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Mus musculus] gi|146325019|sp|Q8CGY8|OGT1_MOUSE RecName: Full=UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit; AltName: Full=O-GlcNAc transferase subunit p110; AltName: Full=O-linked N-acetylglucosamine transferase 110 kDa subunit gi|34785719|gb|AAH57319.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Mus musculus] gi|123228957|emb|CAM21282.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Mus musculus] gi|123229897|emb|CAM25749.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Mus musculus] gi|148682191|gb|EDL14138.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_b [Mus musculus] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|154707419|ref|YP_001424860.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway 5J108-111] gi|154356705|gb|ABS78167.1| tetratricopeptide repeat family protein [Coxiella burnetii Dugway 5J108-111] Length = 561 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 75/229 (32%), Gaps = 11/229 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A E +L+ + A++ ++G + A Y +AL + P Sbjct: 15 QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQN 74 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A +Q + ++ A + + + ++ Sbjct: 75 SRGNILSQHGKLVEATIAYDQAIQLQPDY----ATAYNNIANCFFRQKKFDNAKKAYQKA 130 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307 + L + A A+ LI +A L++ ++ H ++A++Y +L + Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYL--GDF 188 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + E+ ++ L+ +A A+ + P Sbjct: 189 SKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDHFTNALLLNP 237 >gi|3914191|sp|P56558|OGT1_RAT RecName: Full=UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit; AltName: Full=O-GlcNAc transferase subunit p110; AltName: Full=O-linked N-acetylglucosamine transferase 110 kDa subunit gi|1931579|gb|AAC53121.1| O-GlcNAc transferase, p110 subunit [Rattus norvegicus] Length = 1036 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 499 >gi|89886173|ref|NP_001034837.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Sus scrofa] gi|122142735|sp|Q27HV0|OGT1_PIG RecName: Full=UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit; AltName: Full=O-GlcNAc transferase subunit p110; AltName: Full=O-linked N-acetylglucosamine transferase 110 kDa subunit gi|89114276|gb|ABD61726.1| O-linked N-acetylglucosamine transferase [Sus scrofa] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|32307148|ref|NP_858058.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 1 [Homo sapiens] gi|68067509|sp|O15294|OGT1_HUMAN RecName: Full=UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit; AltName: Full=O-GlcNAc transferase subunit p110; AltName: Full=O-linked N-acetylglucosamine transferase 110 kDa subunit gi|18250915|emb|CAC86128.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl transferase [Homo sapiens] gi|23315618|gb|AAH38180.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Homo sapiens] gi|30268372|emb|CAD89970.1| hypothetical protein [Homo sapiens] gi|119625691|gb|EAX05286.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_b [Homo sapiens] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|31873825|emb|CAD97853.1| hypothetical protein [Homo sapiens] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|74007682|ref|XP_858881.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform 10 [Canis familiaris] Length = 1038 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|146284591|ref|YP_001165544.1| TPR repeat-containing protein [Enterobacter sp. 638] gi|145320724|gb|ABP62870.1| Tetratricopeptide TPR_2 repeat protein [Enterobacter sp. 638] Length = 697 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 106/299 (35%), Gaps = 18/299 (6%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A A ++ V Q + L L L + + ++A + + Q P Sbjct: 26 NAGQAAQAEQLCLRVLQVAPSQPDALNLLGLMMHAY---GKMDLALDYIRKAGQSPGAPA 82 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 +L + G L A++ A +A++ P + A ++ ++ L Sbjct: 83 IVFSNLAELCRQRGLLQEAEQAARRAVEQEPQLALAWNNLGIILQEAGKFKASLECLQYV 142 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + + GD+ + +L L + A L Sbjct: 143 ASLQPD----NAEVHNNLANTWKRLGDLQRAQESYQRALNLRPDYAEVYSNLASLLSELG 198 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR------LEEINKESVESL 328 +A + +N P++A+ Y +L + +++ A L E + +L Sbjct: 199 CIDEAAASARQAIDIN--PQLADAYLNLADIE-LSRMRYAEASHWVKALLEFSPRHAGAL 255 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + ++ I + ++A +A A+ IAP R ++L + QA D ++++A+ Sbjct: 256 ITLAHIMIANEHYEEAAFEARKALAIAPDRANAHMILGKALQALGQYEDADRAYSKAAV 314 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 66/195 (33%), Gaps = 13/195 (6%) Query: 107 HSYVSQQHTFH-NEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + S + N L YL I L+ +Y A ++ +L+ A+ +L Sbjct: 202 EAAASARQAIDINPQLADAYLNLADIELSRMRYAEASHWVKALLEFSPRHAGALITLAHI 261 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 A A KAL I+PD + + ++ A ++ Sbjct: 262 MIANEHYEEAAFEARKALAIAPDRANAHMILGKALQALGQYEDADRAYSKAAVLPGTVAE 321 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAE 280 LIAR++ + GD A+ ++LK +S A I AA+ Sbjct: 322 E---ALIARAVLLMETGDKQAATAAFEQALKRFPDS--ARIVAARCDNKFYRAGDPD--I 374 Query: 281 VILEKIWKVNPHPEI 295 ++E P P + Sbjct: 375 DVMESALVSEPTPPL 389 >gi|13775066|gb|AAK39123.1|AF363030_1 UDP-N-acetylglucosaminyltransferase [Mus musculus] Length = 1046 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|310822882|ref|YP_003955240.1| adventurous gliding motility protein AgmK [Stigmatella aurantiaca DW4/3-1] gi|309395954|gb|ADO73413.1| Adventurous gliding motility protein AgmK [Stigmatella aurantiaca DW4/3-1] Length = 4089 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 98/282 (34%), Gaps = 16/282 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKA 180 L ++A + A + E M R + R+ D A KA Sbjct: 306 LIERMAERAGDFAPALAQFEAMAGEAKDRTAQVDLWLRVGTGRLKRLNDPAGALVAFEKA 365 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 P + + ++ + A+ L + + K+ ++ L L Sbjct: 366 AAADPSRADAANTAAEALLEQQKAAEAVAVLERHVGSVKDRTAQSSLRLRLADLCLNQVK 425 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------- 293 D A+ +LK + +A+ AK L+ ++ +AE +LE + P P Sbjct: 426 DADAARAHLDAALKADPANALAAFHLAKLLVEDDQLDEAEALLELA-MLAPRPLSERVAF 484 Query: 294 --EIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +A ++ L RAL LE +E++V ++ A + +A +A + Sbjct: 485 CEALALMFEEREDSRRAFEVLARALVLEPAKPLLLETVVEHAETAQAQAPLAKALKRAAM 544 Query: 351 AMKIAPRKEIFLLLAQIEQANSHN-TDKILYWTQSALHAMPD 391 A + I+ LAQ+ Q + W + + A D Sbjct: 545 AAPDSHALAIWRQLAQLLQGFLADPVGAEAAWQEVLVRAPGD 586 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 54/188 (28%), Gaps = 10/188 (5%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLY-F 162 S + + + Q A + E L+ + + R + L Sbjct: 1096 ASLARAVRMMPADAALRVTARQAAEDADSLDSYAEILQELTEEGNVGAARASLLRELADV 1155 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + ++ D A + L + P +++ + + ++W+ L + A E Sbjct: 1156 QEKKLDDKAGAVQALRALLALEPSNADCLKSLQRLHRAGEQWAELAEVLERLASVATEPA 1215 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A L A L + + + A++ + + + Sbjct: 1216 EQVAYLREAALLHETKLANKERAAATWRTLAERDPLQREAAVALDRLYTDLGRTK----- 1270 Query: 283 LEKIWKVN 290 E W ++ Sbjct: 1271 -ELAWALS 1277 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 29/254 (11%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAK 219 + D +A Y + L D+ + YV ++W+ A + + +K Sbjct: 3308 HAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERMLDIVTRKMAEKA 3367 Query: 220 EWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 ++ A+ L + R A+K G + +S L + L+ Sbjct: 3368 IAEKDGALTLELSRQLYRLGYVAEKLGKREKALDAYEKSYGLDARYLATLESYGHLLVQA 3427 Query: 274 NKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLKRALRLEEI 320 + A +L+ I + H E + ++ L + + I Sbjct: 3428 KRYDDALKVLQAI--LVHHRESLTDLEVVEVYWQLGDVLAALGHSDRAQ--NHFEKALAI 3483 Query: 321 NKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + SL + + + G ++A + + + + ++L L +I + + Sbjct: 3484 DPGHEPSLRALVSLMDKAGRHEKAAELRQQLVSVVDGEAKARVYLELGEIARDKLKDPYM 3543 Query: 378 ILYWTQSALHAMPD 391 + AL PD Sbjct: 3544 AIDAFTGALKVKPD 3557 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D SA+ +AL I P A+ K+W L Q+ + ++ L Sbjct: 3242 DTGSAKTCYQQALAIDPGHLASIRALKGIQEQEKDWGGYEQTLLQEAQQTEDPQAKARAL 3301 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L + D + H + LK +S+ A+ A +++ AE +L Sbjct: 3302 LDVAKYHAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERML 3356 >gi|227889873|ref|ZP_04007678.1| tetratricopeptide repeat family protein [Lactobacillus johnsonii ATCC 33200] gi|227849737|gb|EEJ59823.1| tetratricopeptide repeat family protein [Lactobacillus johnsonii ATCC 33200] Length = 419 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 94/253 (37%), Gaps = 10/253 (3%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A + Sbjct: 62 FPKEDLFKVYLAEILLNDGDEDDGLQLLYDVKPNSDAYLESLLDLADYYQSNGLIETAHQ 121 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A ++PD + + + L+ ++S A+ + KN K + ++L R Sbjct: 122 KLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKTFGE---VVLSQRIAA 178 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 K + I+S + SI A A ++S N + A L+++ + P Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPDYVN 238 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296 Query: 351 AMKIAPRKEIFLL 363 +++AP L Sbjct: 297 GLEVAPDNSDLRL 309 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 69/191 (36%), Gaps = 15/191 (7%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + +E + ++ Y+ A + + + T + S R Sbjct: 121 QKLLEAHKLAPDEDAINFGLAELDYLSGDYSEALDLYRELAKNNKT-----FGEVVLSQR 175 Query: 167 IGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKE 220 I + +A + +A+ + + A + AI +L+Q + + Sbjct: 176 IAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSANDNKAAIKYLDQVIETQPD 235 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +L A + E+ ++ +++ + + +L + AK+ + N+ +AE Sbjct: 236 YVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAANLNQLDEAE 291 Query: 281 VILEKIWKVNP 291 +L+K +V P Sbjct: 292 RLLKKGLEVAP 302 >gi|149758511|ref|XP_001493438.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) isoform 2 [Equus caballus] gi|291407675|ref|XP_002720148.1| PREDICTED: O-linked GlcNAc transferase isoform 1 [Oryctolagus cuniculus] gi|296235745|ref|XP_002763024.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 2 [Callithrix jacchus] Length = 1036 Score = 59.6 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|300723335|ref|YP_003712638.1| hypothetical protein XNC1_2412 [Xenorhabdus nematophila ATCC 19061] gi|297629855|emb|CBJ90471.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061] Length = 389 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 86/259 (33%), Gaps = 31/259 (11%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +L+ R A+ L + G + A+ + +D + Sbjct: 83 GEVEKAIRIHQSLLESASLTFEQRLLAIQQLGRDYMAAGVYDRAENMFLQLVDETDFREN 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 +++ Y +W++AI + K K R A +L+ D + Sbjct: 143 AFNSLLTIYQATSDWNKAIEVSEKLVKLGKHHFREDIAHFYCELALQCMGSDDFSGAIGH 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ + N SI + ++Q + KA +L++I + P + Y HL Sbjct: 203 LNKAAQADKNCARVSIMCGRIHMAQGEHSKATDVLKRILEQDNQLISEALPMLQECYQHL 262 Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLAMKIAP 356 + ++R + E ++++ + D A ++ P Sbjct: 263 SQPDEWEAFVQRCVE---------EECGAIAELHMADIIEQKAGRDIAQTYINRQLERHP 313 Query: 357 RKEI-FLLL----AQIEQA 370 + + L+ A E+ Sbjct: 314 TMRLFYRLMDYHLADAEEG 332 >gi|149042178|gb|EDL95885.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_a [Rattus norvegicus] gi|149042179|gb|EDL95886.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_a [Rattus norvegicus] Length = 1046 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|32307150|ref|NP_858059.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 2 [Homo sapiens] gi|15680175|gb|AAH14434.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Homo sapiens] gi|18250914|emb|CAC86127.1| UDP-N-acatylglucosamine: polypeptide-N-acetylglucosaminyl transferase [Homo sapiens] gi|119625692|gb|EAX05287.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_c [Homo sapiens] gi|123993895|gb|ABM84549.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [synthetic construct] gi|124000677|gb|ABM87847.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [synthetic construct] gi|224487755|dbj|BAH24112.1| O-linked N-acetylglucosamine (GlcNAc) transferase [synthetic construct] Length = 1036 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|157377268|ref|YP_001475868.1| HemY domain-containing protein [Shewanella sediminis HAW-EB3] gi|157319642|gb|ABV38740.1| HemY domain protein [Shewanella sediminis HAW-EB3] Length = 389 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 58/405 (14%), Positives = 126/405 (31%), Gaps = 31/405 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ Y +I L +C + T + T + L F +L Sbjct: 1 MIRIMIYLGIILLGLCISPFFEGMNGYLYFTVWDYEVETGVVFAVIALIVFYGLLQILEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119 F L+ + K K G +++A + A K M + Sbjct: 61 AIIFLLNLLFSSRLLPEKWRKKAAKKHTLIGALALAEEDWATAEKAMSKGAEKGELPALN 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAV---YSLYFESCRIGDLNSAQ 174 L Q + A ++ + + + L + G+L+ A+ Sbjct: 121 LLAAARAAQ----HQNNTEARDEYLLQAENERLAVKAVGTTRTRYLLQQ----GELDKAR 172 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLI 230 + K S V ++ Y +W L + + +E N Sbjct: 173 KELDKLSPTSKSKLPVLRLALELYQAQSDWHSLKLLLPIIKKRNLLSGEELNELIISTNT 232 Query: 231 AR--SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + S + + + D+ ++H + + + + + A +L K K Sbjct: 233 SLLVSAQQSSEQDLEKAWHWLSRAERKEMRYLAIYCVGLNLYQRKPE---ALKLLMKQLK 289 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + P++ + ++S V + K LE E V ++++K+ + A Sbjct: 290 SSTSPDLLSALAEIISPADVEERKVIFSLENKYAEEVNFQILLAKLYQQNKEYRHATTYW 349 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 + P K +L LA+ ++ A+++ + Sbjct: 350 QKVCNLQPDKVCWLALAESQEHLGE--------LNKAVNSYRNAA 386 >gi|139948535|ref|NP_058803.2| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Rattus norvegicus] gi|149042180|gb|EDL95887.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_b [Rattus norvegicus] gi|149042181|gb|EDL95888.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_b [Rattus norvegicus] Length = 1036 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 499 >gi|326918804|ref|XP_003205676.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like, partial [Meleagris gallopavo] Length = 1038 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 100 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 157 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 158 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 212 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 213 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 268 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 269 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 328 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 329 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 386 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ T ++ +L G++ A R KAL++ P+ Sbjct: 293 ANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 352 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 353 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 408 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 409 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 466 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 467 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 502 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 28/223 (12%) Query: 149 IPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKE 203 P R + L + R GD +A+R+ + PD V + + + Sbjct: 6 EPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLD 65 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 S + L K+ N A ++G + + +L+L + I Sbjct: 66 RSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 119 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 120 INLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKAC 172 Query: 323 --ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 173 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 215 >gi|260833062|ref|XP_002611476.1| hypothetical protein BRAFLDRAFT_117202 [Branchiostoma floridae] gi|229296847|gb|EEN67486.1| hypothetical protein BRAFLDRAFT_117202 [Branchiostoma floridae] Length = 1022 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 103/301 (34%), Gaps = 21/301 (6%) Query: 67 SCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNE 119 P L + H GY L L + A ++ A + + Q Sbjct: 130 QLPEALENYRHAVRLKPDFIDGYINLAAAL--VTAGDMEGAVQAYCQALQYNPDLYCVRS 187 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL+ + + A ++ A +L ++ A + K Sbjct: 188 DLGNLLKA-----LGRLDEAKACYLKAIETQPNFAVAWSNLGCVFNAQSEIWLAIHHFEK 242 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA + + + N AI+ + ++ Sbjct: 243 AVQLDPNFLDAYINLGNVLKEARIFDRAAVAYLRALQLSP----NHAIVHANLACVYYEQ 298 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + +++L + A A +L Q K ++E +++P H + N Sbjct: 299 GLIDLAIDTYRRAIELQPHFPDAYCNLANALKEQGKVAESEECYNTALQLSPTHADSLNN 358 Query: 299 YTHLLSEN--TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ E T +K + E+ E + ++ + + G + +A A++IAP Sbjct: 359 LANIKREQGCTEEAVKLYCKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIAP 418 Query: 357 R 357 Sbjct: 419 T 419 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + + + ++ Q H + L L I + A + + + P A Sbjct: 333 GKVAESEECYNTALQLSPTHADSLNNL--ANIKREQGCTEEAVKLYCKALEVFPEF-AAA 389 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I+P + ++ A+ + + Sbjct: 390 HSNLASVLQQQGKLQEALMHYKEAIRIAPTFADAYSNMGNALKEMQDIQGAMQCYTRAIQ 449 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G + + +LKL + A A L Sbjct: 450 INPAF----ADAHSNLASIHKDSGQIPEAIASYRTALKLKPDFPDAYCNLAHCL 499 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + + E LQ+ T ++ +L G A + KAL++ P+ Sbjct: 326 ANALKEQGKVAESEECYNTALQLSPTHADSLNNLANIKREQGCTEEAVKLYCKALEVFPE 385 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + A + A + D+ + Sbjct: 386 FAAAHSNLASVLQQQGKLQEALMHYKEAIRIAPTF----ADAYSNMGNALKEMQDIQGAM 441 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A + +A K+ P+ + Y +L Sbjct: 442 QCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIASYRTALKLK--PDFPDAYCNLAHCL 499 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 500 QIVCDWTDYNARMKKLVAIVADQLDKNRLPSVHPHH 535 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P P + + + + N + + A L + Sbjct: 309 RRAIELQPHFPDAYCNLANALKEQGKVAESEECYNTALQLSPT----HADSLNNLANIKR 364 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + ++L++ A A L Q K ++A + ++ ++ P A+ Sbjct: 365 EQGCTEEAVKLYCKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIAPT--FAD 422 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G ++ R +IN ++ ++ I + G I +A A A+ Sbjct: 423 AYSNMGNALKEMQDIQGAMQCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIASYRTAL 482 Query: 353 KIAPR 357 K+ P Sbjct: 483 KLKPD 487 >gi|15604335|ref|NP_220851.1| hypothetical protein RP472 [Rickettsia prowazekii str. Madrid E] gi|6647956|sp|Q9ZD72|Y472_RICPR RecName: Full=Uncharacterized protein RP472 gi|3861027|emb|CAA14927.1| unknown [Rickettsia prowazekii] gi|292572088|gb|ADE30003.1| HemY-like protein [Rickettsia prowazekii Rp22] Length = 334 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 112/322 (34%), Gaps = 28/322 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ + F + H+ V I+ + T+ F+ + + L + ++ Sbjct: 1 MFRLLLICITFLALYFGFTFIKHFDSKVVISLYDYNIETTLFLSVILGLLLLVSCFIIIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + M KR + A+ +++ A + KM + + +E Sbjct: 61 FLIIIIDLPATIHIMFSKRKINHDRHAV---ILAFA--EYIIGNKMKAASIARKNLSSED 115 Query: 121 LV------YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L + A + + ++ +A +L + A+ Sbjct: 116 LKDFQEFHNFILAVTAE---DIDSKISYFQKLITSKTFVFYASKNLAKLYYDKSLYDKAE 172 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWN---RNRAILLI 230 YA KA +++ ++ Y WS+ I N+ K + E+ +L+ Sbjct: 173 NYAIKAYNLNELDSDNLITLMHCYAKLSLWSKFIFITNKLAKFHKHEFVPKITQYYLLIA 232 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIW 287 + +EN + + I AI+ D + + + N K + IL++ + Sbjct: 233 KQEVENNNTANAIDYLEKAIDLNFYNDELL-------EFYFNLNDKLSVNQKTKILKEAF 285 Query: 288 KVNPHPEIANIYTHLLSENTVG 309 ++ P + ++ + S + Sbjct: 286 RIAPSLRLVQLFKKITSLSDKQ 307 >gi|118089398|ref|XP_001232519.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Gallus gallus] Length = 1035 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.4 bits (101), Expect = 0.079, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|56461661|ref|YP_156942.1| hypothetical protein IL2561 [Idiomarina loihiensis L2TR] gi|56180671|gb|AAV83393.1| Uncharacterized enzyme of heme biosynthesis [Idiomarina loihiensis L2TR] Length = 387 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 110/350 (31%), Gaps = 14/350 (4%) Query: 22 SHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNY 81 S V + + T+ + + + ++ ++ R LS L R+ Sbjct: 22 SGNAGYVLVQFAGVAIETTVVGLFVVTIVAIAVLSVVVSLLRRLLSKTRQGRKWLANRSE 81 Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 K G+ + N A + S ++ +N + L A + A Sbjct: 82 RKAQNIFQQGIRELLDDNPEKATESLSKAYKKSPDNN---IAALTAIAACLNKDAGKATY 138 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + + + + E D A + L+ P + V + + + + Sbjct: 139 WHDEAGAFYDNADTLLQLVSIEQSVKKDPTEADKEMRSLLEAKPHSANVLKLAYRVFKAS 198 Query: 202 KEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 W + L + ++ E++R + R + K + + K Sbjct: 199 GNWQQLKELLPELRRVTDLAPAEFDRLEYQVYFERFVAEGRKSNEMLYNEWRSLPSKQRS 258 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLSENTVGKLKRA 314 + + A +L + ++ K K + P A HL + + L+ Sbjct: 259 D-ATIRLSYAAALKHLGDYEVSARVVLKGLKRGELQPA---AVNSLHLFNAKSEKLLEFV 314 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + + E+ + L +++IA++ A +I P ++ LL Sbjct: 315 QAQLKQDPENRDYLYALAQIAMDNQDFSLAQRALKKLAEIEPSSHVYRLL 364 >gi|300868209|ref|ZP_07112841.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506] gi|300333833|emb|CBN58025.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506] Length = 1545 Score = 59.2 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 93/253 (36%), Gaps = 21/253 (8%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQR 175 + +L + LA+ ++ A LQ P + + F++ G + A+ Sbjct: 291 EDPEAYNIL-AEGYLAQGKFPQAIAACRRSLQLKPDAAIYKLLGNAFQAM--GKVEDAKN 347 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 KAL+I+P+ + Y ++W AI + ++ A + Sbjct: 348 CYLKALEINPNFAEAYANLGSLYGGQQQWQSAIAAFQKAIAIKPDF----AGAYRNFAKL 403 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILEKIWKVNP-- 291 A G + + L + A I AK+ + Q K + + ++NP Sbjct: 404 WAQVGKPQEAAECWYRAFNLDPSKATADEYINLAKTFLEQGKVEQGIDCYRRGLELNPSS 463 Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 H E+A I + E +V +RA+ L N + S ++ +++ ++A Sbjct: 464 SWGYH-ELAEILKNQEKWEESVAFYRRAIEL---NPDHSWSHNNLADALMKLEQWEEAVP 519 Query: 347 KAMLAMKIAPRKE 359 + A+K+ P Sbjct: 520 AYLSAIKLNPDHS 532 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 13/209 (6%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 +I L++ + A E L++ A+ +L G + A+ + KA+ I P Sbjct: 17 RAEIYLSQGKVEEAIAACEQALKVKPDFAQALKTLGNALQAQGRVEEARHWYAKAIQIQP 76 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + Y ++WS AIT + + A + + A G + Sbjct: 77 NFAEAYANLGSIYAAEQKWSEAITHYQKAIALKPNF----AGVYRNLAKVLAQMGKDAQA 132 Query: 246 YHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 ++ L A SL+ Q K ++A + K+N P +A Y +L Sbjct: 133 QDCWYQAFTLEPEKATAEEHLNLGNSLLQQQKLQEAVNCYSRAIKLN--PNLAQAYQNL- 189 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVS 332 LK+A LE+ +++ + + Sbjct: 190 ----GDALKQAGNLEQAAPYYRKAIELKA 214 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 90/287 (31%), Gaps = 39/287 (13%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + L + + + L++ + + + L + + +A++++PD Sbjct: 437 AKTFLEQGKVEQGIDCYRRGLELNPSSSWGYHELAEILKNQEKWEESVAFYRRAIELNPD 496 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 W + + ++W A+ K + + + + +L ++ + A Sbjct: 497 HSWSHNNLADALMKLEQWEEAVPAYLSAIKLNPD--HSWSHNNLGDALVKLERWEEAAEA 554 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------------- 291 + K SQN A + LE+ W+ Sbjct: 555 YAGANQAKND------------FFWSQNNLADALMKLER-WEEAAAAYQQAIELNADHFG 601 Query: 292 -HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 H +A L E + +RA+ L N + S + +E+ +++ Sbjct: 602 THSNLAEALVKLEDWEGAIAAYRRAIEL---NPDFFWSHNNLGDALIELERWEESVPVYR 658 Query: 350 LAMKIAPRK--EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 A+++ P + L +E + Y + A PD W Sbjct: 659 RALELNPDFAWAHYNLGQALEHQEEWDEAIASY--RRAAEIQPDLPW 703 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 22/119 (18%) Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A Y+L + + A +A +I PD PW+ + + +W + ++ Sbjct: 670 AHYNLGQALEHQEEWDEAIASYRRAAEIQPDLPWLPQKLADAIRQRAQWD--LEAASKLY 727 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A E+N D + YH A+E + + A +L+ Q Sbjct: 728 REAIEYN-----------------PDDVQLYHKALEIAPNDADLY---VGLADALVRQG 766 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 7/136 (5%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ R+ +G + + ++LK+ + A +L +Q + +A K Sbjct: 11 AVHFNQRAEIYLSQGKVEEAIAACEQALKVKPDFAQALKTLGNALQAQGRVEEARHWYAK 70 Query: 286 IWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGS 340 ++ P A Y +L S + + + + ++K+ +MG Sbjct: 71 AIQIQ--PNFAEAYANLGSIYAAEQKWSEAITHYQKAIALKPNFAGVYRNLAKVLAQMGK 128 Query: 341 IDQAHAKAMLAMKIAP 356 QA A + P Sbjct: 129 DAQAQDCWYQAFTLEP 144 >gi|126342739|ref|XP_001362317.1| PREDICTED: similar to UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl transferase isoform 2 [Monodelphis domestica] Length = 1035 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|149923554|ref|ZP_01911954.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] gi|149815573|gb|EDM75105.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] Length = 1329 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 12/170 (7%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-------QIPAT 152 A K + + ++E L + + + ++ A + + +L T Sbjct: 652 GEKALKRYKSAYDIDSTNHEVLTGM--ADLLFEQENWDRAFKLYQTILVQHRDSQSDDDT 709 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 L R + A Y KAL++ P V EAV++ A +W I Sbjct: 710 VLVYYR-LGTVKRRQNEPRKALNYMEKALEVQPFNRQVLEAVIELQSAANDWEGVIQA-K 767 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMI-ASYHDAIESLKLCDNSIM 261 + + E + R L +K D + +++L L Sbjct: 768 RALVDVVESDDERFDLYKEIGELYTEKLDNKTKAGEAYMQALDLRPTDFP 817 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 43/122 (35%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 ++ D++ + + L++ P+ + + ++W A+ +++ + Sbjct: 428 KQVEDVDRSIECYREILELDPNHFDAANTLSRLQEAIEDWPSAVETMDRLVGLNDDPQAR 487 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L + D + ++L L + A I A+ S+ KA L+ Sbjct: 488 LELLTRMGRVFFQKLDDQPEAERRLNDALTLDPGHVPALIILAEIYKSRGDWLKAARTLQ 547 Query: 285 KI 286 Sbjct: 548 SA 549 >gi|94267014|ref|ZP_01290659.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93452288|gb|EAT02929.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 585 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 67/233 (28%), Gaps = 10/233 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + ++ + A Q +A + L+ + +L A + + + Sbjct: 60 HFIQAERAKLAGQLELARQAYRQALRCDPLALPVMRNLAMLLLASEQRQEAIEWLQRMAE 119 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P + + Y A + +A + +L + + + + Sbjct: 120 LRPGETEIHSLLANLYAAAGQPDKAAAIYRKILAAEPGNANVTLLLATLYARQERRQDAL 179 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPEIANI 298 + + ++ MA A+ A E+ W E A Sbjct: 180 VMLENLVLQQ----PEMAMAHFYLARLHRELGDLPAALAAYERALALQWSAAMAREAAET 235 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 Y +L R ++ N + +++ I L + +D+A + Sbjct: 236 YEMAGRYEESLRLYR--QVVAENPADERTRGLLANIYLRLERVDEALDELAEL 286 >gi|27499606|gb|AAO17363.1| O-linked GlcNAc transferase [Mus musculus] Length = 1046 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 73/224 (32%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGALLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509 >gi|78222447|ref|YP_384194.1| intermediate filament protein [Geobacter metallireducens GS-15] gi|78193702|gb|ABB31469.1| Intermediate filament protein [Geobacter metallireducens GS-15] Length = 573 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 11/167 (6%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + L ++ A+T LN E + N A L A + G + + ++++ Sbjct: 54 RLRELDGDFEGALTLLNGAI----EADPNSAFLHTAAAEIYLKSGKLDDALRACENAIRV 109 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGK 310 A I A L + + ++A V L K +++P E + Y HL + + Sbjct: 110 DPGFRPARIIAGTILANLKRDKEAIVHLSKAIELDPTKE--DAYLHLAISYVRTFDYEQA 167 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L +IN ES + K +M +A A++I P Sbjct: 168 VNTLKSLIKINPESSLGYYYLGKTYDQMKLQKEAANYYKKAIEIKPD 214 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 15/224 (6%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + I +R +YSL GD A A++ P++ ++ A + Y+ Sbjct: 32 EHSFQPTVNIAGSRALYIYSLSRLRELDGDFEGALTLLNGAIEADPNSAFLHTAAAEIYL 91 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + + A+ + + R I + DK + ++++L Sbjct: 92 KSGKLDDALRACENAIRVDPGFRPARIIAGTILANLKRDK----EAIVHLSKAIELDPTK 147 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 A + A S + +A L+ + K+NP + Y T ++K Sbjct: 148 EDAYLHLAISYVRTFDYEQAVNTLKSLIKINPESSLGYYYL----GKTYDQMKLQKEAAN 203 Query: 320 INKESVESLVIVSKIALE-------MGSIDQAHAKAMLAMKIAP 356 K+++E + ++ +G D A A ++ P Sbjct: 204 YYKKAIEIKPDFEQAIIDLGISQEGLGLYDDAIATYKRLLETNP 247 >gi|54309612|ref|YP_130632.1| tetratricopeptide repeat protein [Photobacterium profundum SS9] gi|46914050|emb|CAG20830.1| putative N-acetylglucosaminyl transferase [Photobacterium profundum SS9] Length = 389 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 89/244 (36%), Gaps = 17/244 (6%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + G L+ A++ + LD PD Sbjct: 83 GEVDRAIRIHQNLIARPNLTIDQRNLALQQLAKDYMAAGFLDRAEKIFEQLLD-EPDHRK 141 Query: 190 -VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYH 247 + ++ Y +EW +AI NQ K K ++ A ++ + + Sbjct: 142 GALQQLLSIYQQTREWEKAIEMANQLVKMGKPKLKHDIAHYWCELAMLEIGAQNQDKAKQ 201 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTH 301 ++L N + AS+ A+ LI + A LE++ + P + Y Sbjct: 202 CLKKALSADKNCVRASLTMARILIKAGDYKAASKQLERVTEQEIDFVGEALPLLLQCYEA 261 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EI 360 +E+ G LK ++ S L++ +I G+I A + P Sbjct: 262 TNNES--GWLKYLQHCVDMKAGSTAELMLADEICKREGAI-LAQTFMTRQLTKNPTMKGF 318 Query: 361 FLLL 364 + L+ Sbjct: 319 YQLM 322 >gi|124024098|ref|YP_001018405.1| hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT 9303] gi|123964384|gb|ABM79140.1| Hypothetical protein P9303_24071 [Prochlorococcus marinus str. MIT 9303] Length = 622 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 104/304 (34%), Gaps = 47/304 (15%) Query: 117 HNEYLVYLLEVQIAL-AERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNS 172 + E ++ L+ +AL + + + A +L + +A+ + E R D Sbjct: 2 NQEEIMQQLQAAVALHNQGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDD--- 58 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQK-------------K 215 A + A+ P P + + A+ W AI L+ K Sbjct: 59 AITLLSSAVSAQPGNPDANYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICL 118 Query: 216 KNAKEWNRNRAILLIARSLE-------------NADKGDMIASYHDAIESLKLCDNSIMA 262 K +++ + +L A S + ++ + ++++ + A Sbjct: 119 KETEQYEHSEIVLKRAISRQPRFAAAWLNLGNTLKEQKKYSEAIVSYRNAIEVKPDFAEA 178 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRL 317 + L + + +A V K +V P+ A Y L + Sbjct: 179 YLNLGNVLKEEGEVEEAIVSYRKAIEVK--PDCAGAYFSLGLVLKGEGEVEEAIVSYRNA 236 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI--EQANSHN 374 E+ + E+ + + + E G +++A A A+++ P + FL L + E+ + Sbjct: 237 IEVKPDFAEAYLNLGYVLKEEGDVEEAIASYRKAIEVKPDFVKAFLGLGAVLTEKGEIDD 296 Query: 375 TDKI 378 ++ Sbjct: 297 ARQV 300 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 4/121 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G++ A KA+++ PD ++ E AI + ++ Sbjct: 187 KEEGEVEEAIVSYRKAIEVKPDCAGAYFSLGLVLKGEGEVEEAIVSYRNAIEVKPDF--A 244 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + L+ ++GD+ + +++++ + + A + L + + A ++ Sbjct: 245 EAYLNLGYVLK--EEGDVEEAIASYRKAIEVKPDFVKAFLGLGAVLTEKGEIDDARQVVS 302 Query: 285 K 285 Sbjct: 303 A 303 >gi|196232942|ref|ZP_03131791.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196222920|gb|EDY17441.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 743 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 13/231 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A +L A L + + G L +A++ KA+ + Sbjct: 64 SGRLVEAENLYTQVLAREPNHPEANRLLGIIAMQTGHLEAARQLLGKAIAGNDQHALAYS 123 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + Y + AI + + + A +L + A G+ + E+ Sbjct: 124 NLGEVYRALGQPREAIEAFRRALQIGPVY----AEVLSNLGIALATVGETTEAISRFREA 179 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHL-LSEN 306 L++ + A +L Q +AE ++ P P+ + N+ + E Sbjct: 180 LQIRPDFPEAQNNLGNALQQQGSLAEAEECYRAALRLRPDFPDASNNLGNVLLEMGRPEE 239 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 V +RAL L + + +G +D++ A A+++ PR Sbjct: 240 AVACHRRALEL---RPSYPGAWNSLGNACGAIGGVDESVAAYREAIRLDPR 287 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 6/206 (2%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL G + + A +++ V + ++ LL + IA+ A + L Sbjct: 53 EALALGTQLHQSGRLVEAENLYTQVLARE-PNHPEANRLLGI-IAMQTGHLEAARQLLGK 110 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + A +L +G A +AL I P V + E + Sbjct: 111 AIAGNDQHALAYSNLGEVYRALGQPREAIEAFRRALQIGPVYAEVLSNLGIALATVGETT 170 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 AI+ + + ++ A + +L+ +G + + +L+L + AS Sbjct: 171 EAISRFREALQIRPDFP--EAQNNLGNALQQ--QGSLAEAEECYRAALRLRPDFPDASNN 226 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291 L+ + +A + ++ P Sbjct: 227 LGNVLLEMGRPEEAVACHRRALELRP 252 >gi|319427909|gb|ADV55983.1| HemY domain protein [Shewanella putrefaciens 200] Length = 388 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 128/384 (33%), Gaps = 32/384 (8%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLFAVSRFFLSC-PAMLFHMLH 77 + V IT G+ TS + L F + +L + V + Sbjct: 20 WLVGNTGYVYITAGDYQIETSLVFGVIALIVFYAVFQVLEWLVITAINLILRSRFIPYHW 79 Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIAL--AER 134 +R K + + G +++A + P A R M L Q AER Sbjct: 80 RRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPALNLLAAARAAQYQQKIAER 137 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + + + T A Y L + G+L A+ K S V + Sbjct: 138 DQYLDRAATQPLAANAVTTTRARYLL-----KQGELALARVELDKLSPTSKSKAPVLKLA 192 Query: 195 VQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI------- 243 + Y ++W ++ + +++N + A A K + Sbjct: 193 LDLYQAQQDWDALKLLLPILKKRQLIDDEKFNELNIVTHCALLKAAATKSEAALEECWQW 252 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 S + +S L A +L N+K +A +L K + P + + + Sbjct: 253 LSRSERNQSEYLA--------IYAIALCRLNRKDEAMKLLLKKLRSAPDTALLKVIPDIT 304 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + K+ L+ E ++ + + + ++K+ + + +A ++ P K+ +L Sbjct: 305 TAQDMDIRKQLLKYEVTHENNADYQICLAKLYQQTREMKEAKTCWQNVCRLEPTKDAWLA 364 Query: 364 LAQIEQANSHNTDKILYWTQSALH 387 LA+I++ + A + Sbjct: 365 LARIQE-QLGEQGYANQSYRQAAN 387 >gi|157368400|ref|YP_001476389.1| cellulose synthase subunit BcsC [Serratia proteamaculans 568] gi|157320164|gb|ABV39261.1| cellulose synthase operon C domain protein [Serratia proteamaculans 568] Length = 1157 Score = 59.2 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 11/198 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL +A +K + Q T AV L + D +A+R+ +AL + P + Sbjct: 364 ALKAGNLALAQQKYQQARQFDNTDSSAVIGLGDVAVARKDDAAAERFYQQALRLDPGSGS 423 Query: 190 VTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 +V Y +A+ +LN Q+ K + +L ++ + A + Sbjct: 424 AVRGLVNIYQRQSP-EKALAYLNSLPRSQQNKMRSTLEGLQLDMLKQQAEQLAQQKQWHQ 482 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYTHLL 303 + + ++ + + + A++L + +A+ + + K +P++ Y L Sbjct: 483 AAEKYRRAQQMDPDDVWLTYHYAQTLRQAGQPEQADALFSRLAQKQRGNPQLTYAYALYL 542 Query: 304 SENTVGKLKRALRLEEIN 321 S + + L ++N Sbjct: 543 SGSDRDQ----QALAQLN 556 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 100/334 (29%), Gaps = 76/334 (22%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A N+ LA++ + Q + ++ L +A+A + A + Sbjct: 355 WLAVDEGDKALKAGNLALAQQKYQQARQFDNTDSSAVIGL--GDVAVARKDDAAAERFYQ 412 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRY------------------------ATKA 180 L++ AV L R A Y +A Sbjct: 413 QALRLDPGSGSAVRGLVNIYQRQS-PEKALAYLNSLPRSQQNKMRSTLEGLQLDMLKQQA 471 Query: 181 LDISPDAPWVTEAVVQQYVLAKE----W-----------------SRAI-TFLNQKKKNA 218 ++ W A + + W + A+ + L QK++ Sbjct: 472 EQLAQQKQWHQAAEKYRRAQQMDPDDVWLTYHYAQTLRQAGQPEQADALFSRLAQKQRGN 531 Query: 219 KEWNRNRAILLIA-----RSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLIS 272 + A+ L ++L + + E + +L A++ A+ L + Sbjct: 532 PQLTYAYALYLSGSDRDQQALAQLNTLPSAQWNDNMRELAQRLKMQ---ATLEHAERLRA 588 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANI--------YTHLLSENTVGKLKRALRLEEINKES 324 + A L H + A+ + + L R+ + Sbjct: 589 AGDEPGAVAYL--------HRQPADTRIDLQLADWALARGDYDAA-LADYQRVRVREPNN 639 Query: 325 VESLVIVSKIALEMGSIDQAHAKAM-LAMKIAPR 357 ++ + + + G +++A + A + P Sbjct: 640 PDARLGEIEAYVAQGKLNEARQRLQTKAPEPTPS 673 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 12/140 (8%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + A A L L + GD ++A + Sbjct: 580 LEHAERLRAAGDEPGAVAYLHRQPADTRIDLQ----LADWALARGDYDAALADYQRVRVR 635 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK--------KNAKEWNRNRAILLIARSLE 235 P+ P ++ YV + + A L K +E N A+ ++ + Sbjct: 636 EPNNPDARLGEIEAYVAQGKLNEARQRLQTKAPEPTPSGNSERREANAWYAVGEPQKATD 695 Query: 236 NADKGDMIASYHDAIESLKL 255 + A A +S L Sbjct: 696 IFTRLKTAAQSEPASQSKAL 715 >gi|195429292|ref|XP_002062697.1| GK19554 [Drosophila willistoni] gi|194158782|gb|EDW73683.1| GK19554 [Drosophila willistoni] Length = 1025 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 14/217 (6%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A + +AL+ +P W + + Q +++K + + L Sbjct: 609 QEKALQLFRRALEQNPRNLWAANGIGAALCAGGLLNEGEAVFKQILESSK-YCTQSLLNL 667 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 SLE Y ++ L S+ A+SL K ++A+ +L + V Sbjct: 668 ANVSLELKKYKQASQMYKQCLDDF-LPPKSVAIMQLLARSLYLGGKAKEAKFVLLQARHV 726 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID--QAHAK 347 PH ++ +Y ++ + + E ++ ++ + + D A Sbjct: 727 APH-DLILLYNLAVTIKQYS----LMVFGMQRPDLKELMLAEQELKVALRYFDGLVASKY 781 Query: 348 AMLAMKIAPRKEIFLL-----LAQIEQANSHNTDKIL 379 A + A + LL L ++ + + D++ Sbjct: 782 ERQAQRQAKKCRAILLDLPEELNRVREQEQLDEDRVR 818 >gi|154302443|ref|XP_001551631.1| hypothetical protein BC1G_09798 [Botryotinia fuckeliana B05.10] gi|150855287|gb|EDN30479.1| hypothetical protein BC1G_09798 [Botryotinia fuckeliana B05.10] Length = 927 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 108/331 (32%), Gaps = 49/331 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIP 150 SI AR +++Y + L A E+ + +++ ++ Sbjct: 538 SINRGKYETARAIYAYALRVFVTS----TKLWLA-AADLEKNHGTKEALWQLLEKAVEAR 592 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T E L E G++++A+R KA + +P+ + A V+ + +A Sbjct: 593 PTSEVLWMMLAKEKWLAGEVDNARRVLGKAFNQNPNNEEIWLAAVKLEAENNQPEQAREL 652 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENAD-----------------------------KGD 241 L ++ A + R L N D +G Sbjct: 653 LKTARQEAPTDRVWTKSVAYERQLGNIDAALDLANQGLNLFPGAAKLWMMKGQIYEGEGK 712 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300 M + K C S+ + ++ KA +L++ P PE+ Sbjct: 713 MPQAREAYSTGTKACPKSVPLWLLYSRLEERAGMVVKARSVLDRARLAVPKSPELWTESV 772 Query: 301 HLL---SENTVGKLKRALRLEEINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIA 355 + + K+ A L+E+ S ++ ++ LE + + A K+ Sbjct: 773 RVERRANNTAQAKIMMAKALQEV----PNSGLLYTESIWNLEARTQRKPRA-LEAIKKVD 827 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 +F+ +A+I +K W + A+ Sbjct: 828 NDPILFVTIARIFWGERR-LEKAQNWFEKAI 857 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 7/150 (4%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + ++G + +L++ S + AA + K +LEK + P Sbjct: 535 AKASINRGKYETARAIYAYALRVFVTSTKLWLAAADLEKNHGTKEALWQLLEKAVEARPT 594 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 E +A + ++ + N + E + K+ E +QA Sbjct: 595 SEVLWMMLAKEKWLAGEVDNARRV--LGKAFNQNPNNEEIWLAAVKLEAENNQPEQAREL 652 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 A + AP ++ E+ + Sbjct: 653 LKTARQEAPTDRVWTKSVAYERQLGNIDAA 682 >gi|251771762|gb|EES52337.1| probable TPR-domain containing protein [Leptospirillum ferrodiazotrophum] Length = 1079 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 50/388 (12%), Positives = 115/388 (29%), Gaps = 93/388 (23%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL L++ M ++ N+ L L + + A L + Sbjct: 587 ALGETLLA----ENQKEPAMQAFRKALELNPNQPLALLELGRAEVLSGDARGALTHLAPL 642 Query: 147 LQIP-----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 ++ P + ++ L + G+ A KA+ + P E + + + Sbjct: 643 VKAPFPKPQQAQIQWLWGLANQ--SAGNDQVALDGLQKAVSLDPGVASYRETLGEFWSNR 700 Query: 202 KEWSRAITFLNQKK----------------------------------KNAKEWNRN--- 224 W +A+ L + + + A ++ R+ Sbjct: 701 SRWDKALPELEKSQSLDPKNALLALEIAWGKVKTSKGTPDTAQLERVVRRASDYERSHPN 760 Query: 225 --RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAE 280 R+ L+ A++ K D + +D + L A++ A L+ K +A Sbjct: 761 DLRSALIEAQADLLLKKNDRALAVYDRL----LASQPSNAALLYGKAALLLGNGKVDEAR 816 Query: 281 VILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 ++ K+ +P+ + N G + R+ +VE + +++ L Sbjct: 817 KLVRKLLADHPNNLGANLLMAQIDQRKNNVRGMVDHLERVHRTLPSAVEPALALAQADLS 876 Query: 338 MGSIDQAHAKAMLAMKIAP--RKEIFLL-------------------------------- 363 +G ++A + A + P + ++L Sbjct: 877 LGRFEEAKSVAFSLYEGHPGLYQALYLKASAEMGLKEYRHAVRDFVTLSRHDKNPGAMLN 936 Query: 364 LAQIEQANSHNTDKILYWTQSALHAMPD 391 +A + + + A + P Sbjct: 937 MASVAAGKMGDEAASRQYLDKAFRSDPG 964 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 103/321 (32%), Gaps = 45/321 (14%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL + + + N L + + + +E + LL L + A + Sbjct: 480 EALESLYLVTLSANKKLPEAIGEGEAYLKSHPSEQNIRLLLADFDLQAGKQRKAMDLYRQ 539 Query: 146 MLQIPATREFAVYSL---------YFES-------------------------CRIGDLN 171 +L + A+ L Y E+ Sbjct: 540 ILSVDPKNVQALTDLANLEFRQKKYAEAESYDRRALREVPDNPNLETALGETLLAENQKE 599 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A + KAL+++P+ P + + VL+ + A+T L A +A + Sbjct: 600 PAMQAFRKALELNPNQPLALLELGRAEVLSGDARGALTHL-APLVKAPFPKPQQAQIQWL 658 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 L N G+ + +++ L + ++++ KA LEK ++P Sbjct: 659 WGLANQSAGNDQVALDGLQKAVSLDPGVASYRETLGEFWSNRSRWDKALPELEKSQSLDP 718 Query: 292 HPEIAN---IYTHLL-----SENT-VGK-LKRALRLEEINKESVESLVIVSKIALEMGSI 341 + + + + + + ++RA E + + S +I ++ L + Sbjct: 719 KNALLALEIAWGKVKTSKGTPDTAQLERVVRRASDYERSHPNDLRSALIEAQADLLLKKN 778 Query: 342 DQAHAKAMLAMKIAPRKEIFL 362 D+A A + P L Sbjct: 779 DRALAVYDRLLASQPSNAALL 799 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 77/252 (30%), Gaps = 7/252 (2%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 L+E + N A + + +L++ L + G A + P + Sbjct: 49 YLSEGKVNEAIIEFQNVLKVNPKSVKGRLGLADAYMKKGWTTQAVLEYREVSKEDPLSLP 108 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+ + V + +W+ + K N L G + + Sbjct: 109 AHLAMARYGVNSGQWTAVEPEIAAVLKIDP----NNVEGLTFEGERQLALGHQKEAEDNF 164 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSEN 306 ++L L S+ A + +N KA ++ +P A Y Sbjct: 165 RKALALSPGSVPALVGMGDLFRKENLADKASSFYQQALAKDPSNGRALTGLGYLAQTQGK 224 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 T + + E +K + S +I + G + +A K A I + +A+ Sbjct: 225 TDEAKENFQKAMEADKGDLRSRIIYTNFLAGQGKVQEAIDLLKAVPKKAADLRIPVKIAE 284 Query: 367 IEQANSHNTDKI 378 E N I Sbjct: 285 YEVLLGQNAKAI 296 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 29/265 (10%), Positives = 79/265 (29%), Gaps = 14/265 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L R + + + N+ L+E Q L ++ + A + +L + +Y Sbjct: 742 AQLERVVRRASDYERSHPNDLRSALIEAQADLLLKKNDRALAVYDRLLASQPSNAALLYG 801 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 G ++ A++ K L P+ + Q + L + + Sbjct: 802 KAALLLGNGKVDEARKLVRKLLADHPNNLGANLLMAQIDQRKNNVRGMVDHLERVHRTLP 861 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 +A + + G + A + A A + + + R A Sbjct: 862 SAVEP----ALALAQADLSLGRFEEAKSVAFSLYEGHPGLYQALYLKASAEMGLKEYRHA 917 Query: 280 EVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVES----LVIV 331 + + + +P +A++ + + + + + + + + Sbjct: 918 VRDFVTLSRHDKNPGAMLNMASVAAGKMGDEAASR-QYLDKAFRSDPGNPSVLNNLAFSL 976 Query: 332 SKIALEM-GSIDQAHAKAMLAMKIA 355 ++ ++ ++D A A Sbjct: 977 AERNADLPRALDLARKALAKADTPD 1001 >gi|302038729|ref|YP_003799051.1| hypothetical protein NIDE3440 [Candidatus Nitrospira defluvii] gi|300606793|emb|CBK43126.1| conserved protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 561 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 96/273 (35%), Gaps = 11/273 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 +LL Q A +++ +A ++ + + PA+ L GD+ SA R+A + Sbjct: 13 FLLGYQ-AELDQETELAIKEYQLALQTDPASNYLKAR-LAVLYFTAGDVPSAVRFADEVA 70 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 D+ + + Y A + +A+ N+ + R+ A+ L A++ Sbjct: 71 DVPGLDAQMLGQIGGMYAAAGKPEKALRLFNRAIEQEP----QRSEHFFAKGLLQANQKQ 126 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + + +K+ +S + + + KA E+ +NP E A + Sbjct: 127 YVEAEDTIRAGIKISPDSAVGYYYLGRIGVEARDFDKATTHFEQAVALNPAFEPAYVALG 186 Query: 302 LLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E + K L+ +N ++ + + ++ + D A + + P Sbjct: 187 SVYEAKQDRDKAIGIYRRYLQGVNPKNRDIRHHLIRLQVSAKQYDDALRELQEMLAEDPS 246 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 L + + K + + L P Sbjct: 247 DLDAQLRMGLVYGEQKDYPKAIQQLKQILTVRP 279 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 86/274 (31%), Gaps = 14/274 (5%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEY--LVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G M AA A ++ + +Q +E+ LL+ ++QY A + + ++ Sbjct: 84 GGMYAAAGKPEKALRLFNRAIEQEPQRSEHFFAKGLLQAN----QKQYVEAEDTIRAGIK 139 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 I Y L D + A + +A+ ++P A+ Y ++ +AI Sbjct: 140 ISPDSAVGYYYLGRIGVEARDFDKATTHFEQAVALNPAFEPAYVALGSVYEAKQDRDKAI 199 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + NR+ LI + + E L + + A + Sbjct: 200 GIYRRYLQGVNPKNRDIRHHLI---RLQVSAKQYDDALRELQEMLAEDPSDLDAQLRMGL 256 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KES 324 Q KA L++I V P Y L E T N Sbjct: 257 VYGEQKDYPKAIQQLKQILTVRPTELKVRDYLGYLYEETKDYANAMEA-YRYNLTLEPSY 315 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E + + + +A A + P++ Sbjct: 316 FEGHLHLGVLQYRTKQYAEAIQHLREASLLNPKQ 349 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 90/278 (32%), Gaps = 27/278 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + Y A E L + + L R A ++ +A ++P P Sbjct: 292 YEETKDYANAMEAYRYNLTLEPSYFEGHLHLGVLQYRTKQYAEAIQHLREASLLNPKQPE 351 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++ ++ + ++ + + + ++ D + Sbjct: 352 AHIVLGLSHFQVEQYEPSLQAFQEGIRHNPD--NADLHFNAGTAYDKLNRFDEVV--KSM 407 Query: 250 IESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPH-----PEIANIYTH-- 301 +L L + A S + K +A + ++ + P +A + Sbjct: 408 QTTLALDPHHADAMNYLGYSYAERGVKIEEAIALTKQAVALRPTNGYYVDSLAWAFFKKG 467 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 LL+E + ++KRA+ L + E + +I L+ + + ++++ P Sbjct: 468 LLAE-AMAEMKRAVALVGDDPVIYEH---LGEIYLKQQHLSDGREALLHSLELDP--SND 521 Query: 362 LLLAQIEQANSHN---TDKILYWTQS------ALHAMP 390 L+ + + + ++I + A A Sbjct: 522 KLMQRFRELGLGDPAKEERIRQALRRVSDRKSATSAPA 559 >gi|301060056|ref|ZP_07200929.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300445819|gb|EFK09711.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 751 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 81/258 (31%), Gaps = 8/258 (3%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L+ I Y A +L A +L R + A++ + ++ Sbjct: 377 LKADIKATNGDYAEAISDYRYVLDEEPGNLRAAMNLAKAHMRNSEPMLAEQTYKRIVEQD 436 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P A + Y + A L + R L + D+ A Sbjct: 437 PSAVEARLDLADYYAGKGKPDLAKEMLEAVLTIDPDNRR----ALSGMGNLAMRQKDLPA 492 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTH 301 + K ++ +++NK +A + EK +NP E A + Sbjct: 493 AQSYVDRLSKTEPDAANTYYQKGLLKLAENKPDEAADLFEKALNLNPDFEGALFRLLTIR 552 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360 + + ++R + ++ V + ++ QA A++I P ++ Sbjct: 553 MNKDGIESAIERCRQQIRQRPDNYRYYVFLGRLYGTQKDYAQATQSFEKALEINPDSQDA 612 Query: 361 FLLLAQIEQANSHNTDKI 378 LA++EQA I Sbjct: 613 LFGLARVEQAMGSIDGAI 630 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 90/283 (31%), Gaps = 50/283 (17%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATK 179 +L ++A ++ A ++ + +++ + L R + A+ T+ Sbjct: 203 ARMLLAELAEKQKDLKAAEKQYQKLVETGGEPFKLL----LSQFYARNNEDAKAEDILTE 258 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + P+ A+ + + L + K E + +L SL ++ Sbjct: 259 LIKAHPEKISYRLALAAFLKSKGQRQAMLEVLERCIKENPEAYKPCEML----SLAYLEE 314 Query: 240 GDMIASYHDA---IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291 G + +E +K + A + A + K +A ++ ++ NP Sbjct: 315 GHYDEALQVMDGFMERVKTGPEFLQAKLVKATIYFKEKKMDEALKLVREVLDENPRDVKA 374 Query: 292 HPEIANI------YTHLLS------ENTVGKLKRALRLEEINKESVESLVI--------- 330 H A+I Y +S + G L+ A+ L + + + E ++ Sbjct: 375 HALKADIKATNGDYAEAISDYRYVLDEEPGNLRAAMNLAKAHMRNSEPMLAEQTYKRIVE 434 Query: 331 ----VSKIALEMGSI-------DQAHAKAMLAMKIAPRKEIFL 362 + L++ D A + I P L Sbjct: 435 QDPSAVEARLDLADYYAGKGKPDLAKEMLEAVLTIDPDNRRAL 477 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 67/196 (34%), Gaps = 15/196 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G+ A+ AL I P + + + + A ++ + Sbjct: 43 EKGEYIKARLEFKNALQIDPKFAEAYYMLGRVEMKTENPKGAFGAFSKAVSLNPD----- 97 Query: 226 AILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L SL + + A L+ A + A LI+ K ++ E IL Sbjct: 98 -LLEAQISLGRILFAAKQIEKAKEKAELVLEKKPGDTDALLLKAACLIASEKTKEGEAIL 156 Query: 284 EKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + +P PE +A +Y + K + + +++ + ++++++A + Sbjct: 157 NAVIADHPKMPEPLMMLAKVYLD--RGDPAKSSKLLESVLVKDPKNIRARMLLAELAEKQ 214 Query: 339 GSIDQAHAKAMLAMKI 354 + A + ++ Sbjct: 215 KDLKAAEKQYQKLVET 230 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 54/178 (30%), Gaps = 38/178 (21%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA------------ 279 + +KG+ I + + +L++ A + + + A Sbjct: 37 KGKALFEKGEYIKARLEFKNALQIDPKFAEAYYMLGRVEMKTENPKGAFGAFSKAVSLNP 96 Query: 280 ---------EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI---------- 320 IL ++ E A + +T L +A L Sbjct: 97 DLLEAQISLGRILFAAKQIEKAKEKAELVLEKKPGDTDALLLKAACLIASEKTKEGEAIL 156 Query: 321 ------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQAN 371 + + E L++++K+ L+ G ++ + P +LLA++ + Sbjct: 157 NAVIADHPKMPEPLMMLAKVYLDRGDPAKSSKLLESVLVKDPKNIRARMLLAELAEKQ 214 >gi|161505841|ref|YP_001572953.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867188|gb|ABX23811.1| hypothetical protein SARI_04018 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 1172 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 99/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 282 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 341 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 342 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 401 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 402 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 461 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 462 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 521 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 522 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 581 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +V + A + + L + P I L LA Sbjct: 582 LAGRLQSNLVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 626 >gi|327287040|ref|XP_003228237.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 3 [Anolis carolinensis] Length = 1046 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 71/253 (28%), Gaps = 33/253 (13%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+ +A + +Y + Y + A E L++ Sbjct: 272 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRL 322 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T ++ +L G++ A R KAL++ P+ + + A+ Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + + A + D+ + ++++ A A Sbjct: 383 HYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 438 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRA------- 314 +A K+ P+ + Y +L + ++K+ Sbjct: 439 HKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 496 Query: 315 ---LRLEEINKES 324 RL ++ Sbjct: 497 LEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|229586824|ref|YP_002845325.1| HemY-like protein [Rickettsia africae ESF-5] gi|228021874|gb|ACP53582.1| HemY-like protein [Rickettsia africae ESF-5] Length = 334 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 85/260 (32%), Gaps = 11/260 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ F + + V I+ + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGFTFIERFDSKVFISLYDYNIETTLFFSLILGLLLLISCFIVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116 + P+ + ++ KR + AL +++ A + A +S + Sbjct: 61 FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFAEYIMNNKAKSASIARKNLSSEDLK 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ L+ + + ++ + +L A+ Y Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEQAENY 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235 ATKA + + +++ Y W++ I N+ K + E A + + + Sbjct: 175 ATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234 Query: 236 NADKGDMIASYHDAIESLKL 255 + + + ++ L Sbjct: 235 EVESNNTANAIDYLATAVDL 254 >gi|42521851|ref|NP_967231.1| hypothetical protein Bd0225 [Bdellovibrio bacteriovorus HD100] gi|39574381|emb|CAE77885.1| conserved hypothetical protein with TPR domain [Bdellovibrio bacteriovorus HD100] Length = 627 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 97/299 (32%), Gaps = 43/299 (14%) Query: 126 EVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD-- 182 + E A E +M ++ + + L E + G + + A +A+ Sbjct: 79 MGEAYALEGNSQKAVEAFKMVLIYDTNSPAVNMR-LAAEFLKQGMITESLAQAEEAVAKD 137 Query: 183 ------------------ISPDAPWVTEAVVQQY--------------VLAKEWSRAITF 210 + P A V++ K+ +A+ + Sbjct: 138 PKNVDSHLLLGGLYSSLKLYPKAMEQYNTVMKLQPDNTEAPLYIGALYSEQKQSDKAVKY 197 Query: 211 LNQKKKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 KN + A I R LE + A+ ++L+L + A + Sbjct: 198 FESLLKNPEYNTPYLAHYYIGRVRLEQPEAKYQKAAEASFKKALELKPDFADAVLTLGVL 257 Query: 270 LISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES- 327 Q + KA + K N P P +A + + E +LE + +S E Sbjct: 258 YSKQKTEDKAVSLYRAFQKENSPSPRVAEVLAQIYIERG-DYENAYEQLEVMENDSDEPL 316 Query: 328 --LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQ 383 + ++ I +E D A AK +K AP ++ LA + + + + +T+ Sbjct: 317 NVRMKMALILIEQKRYDTAVAKLEEILKDAPESDKVRFYLAAVYEETRQHEKAVKEYTK 375 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 73/197 (37%), Gaps = 17/197 (8%) Query: 133 ERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNS-----AQRYATKALDISP 185 ++Q + A + E +L+ P T A Y Y R+ + A+ KAL++ P Sbjct: 188 QKQSDKAVKYFESLLKNPEYNTPYLAHY--YIGRVRLEQPEAKYQKAAEASFKKALELKP 245 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D + Y K +A++ +K R +L + ++GD + Sbjct: 246 DFADAVLTLGVLYSKQKTEDKAVSLYRAFQKENSPSPRVAEVL----AQIYIERGDYENA 301 Query: 246 YHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 Y +E ++ + ++ A LI Q + A LE+I K P + Y + Sbjct: 302 YEQ-LEVMENDSD-EPLNVRMKMALILIEQKRYDTAVAKLEEILKDAPESDKVRFYLAAV 359 Query: 304 SENTVGKLKRALRLEEI 320 E T K +I Sbjct: 360 YEETRQHEKAVKEYTKI 376 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 84/238 (35%), Gaps = 14/238 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDI 183 QI + Y A+E+LE+M V + ++A + L Sbjct: 289 AQIYIERGDYENAYEQLEVMENDSD-EPLNVR--MKMALILIEQKRYDTAVAKLEEILKD 345 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P++ V + Y ++ +A+ + + + A++ A L+ G + Sbjct: 346 APESDKVRFYLAAVYEETRQHEKAVKEYTKIPSTSTYYG--EAVVHAAYLLKGL--GRLN 401 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 A LK + A L + + A LE+ K P Y + Sbjct: 402 EGLEVAAAGLKARQDQPQIFAMYASLLDEKGDYKNASATLEQGLKKFPENAQLRFYYGTI 461 Query: 304 SENTVGK---LKRALRLEEINKESVESLVIVSKIALEMG-SIDQAHAKAMLAMKIAPR 357 ++ K + ++ E++ V+ L ++ EMG + +A A A+++ P Sbjct: 462 NDRMGNKDVVVTEMQKVLELDPNHVQGLNYLAFTWAEMGVKLPEAEKLARRALELEPT 519 >gi|119505796|ref|ZP_01627863.1| TPR domain protein [marine gamma proteobacterium HTCC2080] gi|119458363|gb|EAW39471.1| TPR domain protein [marine gamma proteobacterium HTCC2080] Length = 665 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 66/198 (33%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKE 220 E + G A+ +AL+ +P A++ + + A L + + Sbjct: 14 VELVKGGARQEAEALCRQALEQNPGDI-NFVALLGWILAESNKLEEAEELLTRAVRTTPG 72 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + + L + + + +L + + + ++A+ Sbjct: 73 NAKAQEDLGT----VLLNLNRPEEALSHLERARELRPPNAPLLSKLGGAYQKLGRLQEAD 128 Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +L++ ++P ++ ++ K L N ++V + +++++IA+ Sbjct: 129 AVLKQAASMSPVQAKLEEATRLFIAGKFRESEKLTQALVRENPDNVNAALLLARIAIMAK 188 Query: 340 SIDQAHAKAMLAMKIAPR 357 + A + PR Sbjct: 189 CFEDARVILERITQTKPR 206 >gi|301058586|ref|ZP_07199591.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300447318|gb|EFK11078.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 459 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 49/161 (30%), Gaps = 23/161 (14%) Query: 89 YTGLMSIAAHNIPLARKM-------HSYVSQQHTFHNEYLVYLLEV-------------- 127 GL+ + + A S + L+ Sbjct: 10 SVGLVFLFSGMADAADNCDVARDVAERAASAYKKNKKRGIDLFLKAYRLCPDDGAFAYNA 69 Query: 128 -QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL-NSAQRYATKALDISP 185 + A + LEM +Q TR +L GD SA +A KA + P Sbjct: 70 GMACYGDGDLARARKYLEMAVQKDGTRALWHNNLASVLLERGDNMKSALSHAQKAAGLDP 129 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+P + E + + ++ I + + K + +R A Sbjct: 130 DSPEILETLANAHAAVGDYPGGIAVMKKAAKRWPQNSRVAA 170 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 14/135 (10%) Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---- 286 A +A K + +++ +LC + + A + +A LE Sbjct: 34 AERAASAYKKNKKRGIDLFLKAYRLCPDDGAFAYNAGMACYGDGDLARARKYLEMAVQKD 93 Query: 287 -----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 W H +A++ +N L A + ++ +S E L ++ +G Sbjct: 94 GTRALW----HNNLASVLLE-RGDNMKSALSHAQKAAGLDPDSPEILETLANAHAAVGDY 148 Query: 342 DQAHAKAMLAMKIAP 356 A A K P Sbjct: 149 PGGIAVMKKAAKRWP 163 >gi|83594427|ref|YP_428179.1| hypothetical protein Rru_A3097 [Rhodospirillum rubrum ATCC 11170] gi|83577341|gb|ABC23892.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 933 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 14/229 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +A E ++ T AV +L + + GD A+ L + + Sbjct: 491 GDTAMARAAFETAVRKEPTAGDAVRNLALTALQSGDTEGARGVVEGYLRTNAGDSAMAMI 550 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + + + A E + + A+ A ++L Sbjct: 551 AAAVANKRND----LVAVEKWLRQALERDPANMEAASNLASLLTSTSRPQAAIIVAQDAL 606 Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENTV 308 ++ + A + A K+ + A +L + + P + +A Y +L N Sbjct: 607 RISPD-TPAVMEALGKAQLLIGDYTAAADVLRRAVAIKPSGLTYYLLATAYLNL---NDP 662 Query: 309 GKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +LK A + ++ + V+S V+++ + ++ GS+ A P Sbjct: 663 PRLKEALESVVKLQPDHVDSRVMLATMIVDGGSLSDAKTAVEGVTTDFP 711 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 41/359 (11%), Positives = 94/359 (26%), Gaps = 79/359 (22%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 L ++ D+ + G++ + + +AR ++ + + L Sbjct: 463 EALAGDTKRKYPDRAWGWTMDGMIQASRGDTAMARAAFETAVRKEPTAGDAVRNL--ALT 520 Query: 130 ALAERQYNIAHEKLEMMLQ----------------IPATREFAVYSLYFESCRIGD---- 169 AL A +E L+ AV ++ Sbjct: 521 ALQSGDTEGARGVVEGYLRTNAGDSAMAMIAAAVANKRNDLVAVEKWLRQALERDPANME 580 Query: 170 --------------LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A A AL ISPD P V EA+ + +L +++ A L + Sbjct: 581 AASNLASLLTSTSRPQAAIIVAQDALRISPDTPAVMEALGKAQLLIGDYTAAADVLRRAV 640 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + D +KL + + + + A ++ Sbjct: 641 AIKPSG-----LTYYLLATAYLNLNDPPRLKEALESVVKLQPDHVDSRVMLATMIVDGGS 695 Query: 276 KRKAEVILEKIWKVNP-----------------HPEIANIYTHLLSENTVGKLKRALRL- 317 A+ +E + P P A + + + + + L Sbjct: 696 LSDAKTAVEGVTTDFPGDPRAQEVRARYLAKAEGPASAITFLEASLTDPNTRPRNLVMLL 755 Query: 318 --------------------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 N + + ++ + +++A ++ P Sbjct: 756 ASAYNEKGDGAKASSLLEDWVAKNPDDYPGRLSLATQQIAANQLEKAKTTLEKGLERVP 814 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 66/230 (28%), Gaps = 12/230 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL AR + L+ QI + A L Sbjct: 142 EGLALFGKGQDGAARLALDKALDIDPADKDALIG--AAQIETMAGHQDAARALLARAAAA 199 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + + + D +A+ ++A P P + ++ Q + A + + A Sbjct: 200 APDDVDVLVAQADTALSANDPAAAEGLFSQAAARLPLNPLIRLSLAQAQIEAGKNAEARQ 259 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 LN + L R L DM A+ D +L L A A Sbjct: 260 TLNTVLADIPA----HPWALYLRGLTAYRTNDMTAADKDLTAALALAKTLRPAIFLAGVV 315 Query: 270 LISQNKKRKAEVIL----EKIWKVNPHPEI--ANIYTHLLSENTVGKLKR 313 + + +A +L E K N + A L ++ +L R Sbjct: 316 KYNIGEYEQASRLLAGLTETEGKSNKTADAVRAAALLKLGRDDESYRLLR 365 >gi|108757682|ref|YP_630165.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108461562|gb|ABF86747.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 490 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 91/252 (36%), Gaps = 11/252 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A L ++++ ++A +L R+G A+R KALD++P+ + Sbjct: 89 GELTAAEAALRTLVELDPKLDYAWTNLGIVQERMGKTADAERSYRKALDVAPEQQSAWDC 148 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + Y ++ L ++ + + L A ++ + A+ +A ++L Sbjct: 149 LARLYGRTGRTAKLEAELRERLSSQPDS----VALRTALAITLLQAKNHAAASAEAKQAL 204 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308 K + + A A+ + K A ++LE ++P H + +Y L ++ Sbjct: 205 KGDERHVRAMQVLAQVYYREGKHELARMVLENARAIDPKDAATHNGLGLVYLAL--DSRP 262 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 L+ ++ + E+ + E A + A++ AP L Sbjct: 263 QALESFKTAAQLRPDFAEARNNFGAMLNEAQDYAAAVTELEAAVRAAPDFASARLNLGNA 322 Query: 369 QANSHNTDKILY 380 N + Sbjct: 323 HRGQGNFARARA 334 >gi|327287038|ref|XP_003228236.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 2 [Anolis carolinensis] Length = 1036 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 266 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 106/353 (30%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GNVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + KRA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ +A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 71/253 (28%), Gaps = 33/253 (13%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+ +A + +Y + Y + A E L++ Sbjct: 262 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRL 312 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T ++ +L G++ A R KAL++ P+ + + A+ Sbjct: 313 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 372 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + + A + D+ + ++++ A A Sbjct: 373 HYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 428 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRA------- 314 +A K+ P+ + Y +L + ++K+ Sbjct: 429 HKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 486 Query: 315 ---LRLEEINKES 324 RL ++ Sbjct: 487 LEKNRLPSVHPHH 499 >gi|327287036|ref|XP_003228235.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 1 [Anolis carolinensis] Length = 1066 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 71/253 (28%), Gaps = 33/253 (13%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+ +A + +Y + Y + A E L++ Sbjct: 272 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRL 322 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T ++ +L G++ A R KAL++ P+ + + A+ Sbjct: 323 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALM 382 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + + A + D+ + ++++ A A Sbjct: 383 HYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI 438 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRA------- 314 +A K+ P+ + Y +L + ++K+ Sbjct: 439 HKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 496 Query: 315 ---LRLEEINKES 324 RL ++ Sbjct: 497 LEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|297739123|emb|CBI28774.3| unnamed protein product [Vitis vinifera] Length = 747 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 102/321 (31%), Gaps = 34/321 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ-----IALAERQYNIAHEKLEMMLQ----- 148 + +K S + + + + L L + A E + + E L+ +L+ Sbjct: 321 DAEECKKRGSIETARAIYAH-ALTVFLTKKSIWLKAAQLE-KSHGTRESLDALLRKAVTY 378 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P + E GD+ +A+ +A P++ + A + E RA Sbjct: 379 RPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERAR 437 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDM------------------IASYHDAI 250 L + ++ ++ R L N + + Sbjct: 438 MLLAKARERGGTERVWMKSAIVERELGNTGEERSCIPLWLSLSHLEEKMNGLSKARAVLT 497 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTVG 309 + K + + A ++ K++A++++ K + P + ++ Sbjct: 498 MARKKNPQNPELWLAAVRAESRHGNKKEADILMAKALQECPTSGILWAASIEMVP-RPQR 556 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 K K L++ + + V+K+ +D+A A+ +AP F L + Sbjct: 557 KTKSLDALKKCD-HDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFE 615 Query: 370 ANSHNTDKILYWTQSALHAMP 390 + + + + A P Sbjct: 616 VQHGSEENQKDVLRRCVAAEP 636 >gi|51473659|ref|YP_067416.1| hypothetical protein RT0459 [Rickettsia typhi str. Wilmington] gi|51459971|gb|AAU03934.1| rickettsial conserved hypothetical protein [Rickettsia typhi str. Wilmington] Length = 334 Score = 58.8 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 109/322 (33%), Gaps = 28/322 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ ++ F + H+ V I+ N T+ F+ + + L ++ Sbjct: 1 MFRLLLISITFLVLYSGFTFIEHFNSKVVISLYNYNIETTLFLSVILELLLLVFCFIIIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + ++ KR + AL +++ A + KM + + ++ Sbjct: 61 FLIIIIDLPATIHNIFSKRKINHDRHAL---ILAFA--EYIIGNKMKAASIARKNLSSDD 115 Query: 121 LV------YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L + A + + ++ +A +L + A+ Sbjct: 116 LKDFQKFYNFILAITA---DDIDSKIFYFQKLITSKEFIFYASKNLAKLYYDKSLYDKAE 172 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARS 233 YA KA +++ ++ Y W++ I N+ K + E+ + + Sbjct: 173 NYAIKAYNLNKLDSDNLIILMHCYAKLSLWTKFIFITNKLAKFHKHEFIPKITQYYLLIA 232 Query: 234 LENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIW 287 + + + + AI+ D + + + N K + IL+K + Sbjct: 233 KQEVNSNNTANAIDYLEKAIDLNFYNDELL-------EFYFNLNDKLSVDQKTKILKKAF 285 Query: 288 KVNPHPEIANIYTHLLSENTVG 309 ++ P + ++ + S + Sbjct: 286 RITPSLRLVQLFKKITSLSDKQ 307 >gi|239905318|ref|YP_002952057.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] gi|239795182|dbj|BAH74171.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1] Length = 737 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 7/197 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +I D A+ AL A+ YV A+ N + + Sbjct: 508 LKIHDYTVAEALFRHALHSKQSVSRAAAALADLYVTQGRHDEALDVAAAFLPNLYDKDPP 567 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A+LL S + KGD + A E+L+L AS A + A +L+ Sbjct: 568 KALLLWNASRAHRLKGDTAKAREVAAEALRLQPVFPNASRELALLALGDGALDAAVSLLK 627 Query: 285 KIWKVNP-HPE----IANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + P PE + +Y + + +RAL + + E+ + ++ AL + Sbjct: 628 ESHQQTPWEPENWALLGQLYLRQGKYSRAYEQFRRALTRSQELHATTETEIHLALAAL-L 686 Query: 339 GSIDQAHAKAMLAMKIA 355 + A+ + Sbjct: 687 QRFGRPDIAALHVARAH 703 >gi|206890955|ref|YP_002249256.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 542 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 88/268 (32%), Gaps = 49/268 (18%) Query: 130 ALAERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCR------------------ 166 L Y+ A E + +L+ + + +Y E Sbjct: 124 YLISGMYDKAIETFKKILKEDSENIMALHFLGI--IYIEKKDFKSARESFKTILKLNPDY 181 Query: 167 -------------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 G+L A+ Y KAL+++P+ + E ++ Y+ K + AI L Sbjct: 182 EPAYTNLGAVEELAGNLKDAELYFKKALELNPENLFARERLINLYLSQKSYKEAIKELET 241 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K+ E + L + L+ + N + + I Sbjct: 242 LKEQKSESEQIHEKLALLY-LQIKQYDKATEELEYLLSKHPKDLNLM---YYLSLIYIET 297 Query: 274 NKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 K +AE +L++I +NP +A +Y L + + L + + + E Sbjct: 298 GKLSEAEHLLKQIISINPKQVNAFLNLATVY--LKQKKLIEALNIYDEILQFAGDVPEIY 355 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ A+++ +A A+ P Sbjct: 356 IYATETAMDLKDYQRARQYIENALSRFP 383 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 92/269 (34%), Gaps = 9/269 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + ++ A + +++ + ++ L + A + +L+ Sbjct: 19 GYYASINGDLNKAIVFYKEALKEN--PQSKFLKIILADTYLKIDELETAKNYITDVLKED 76 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ L + + A K L SP+ + + Y+++ + +AI Sbjct: 77 TENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNKIEMLSKIGNLYLISGMYDKAIET 136 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + K + + L + +K D ++ LKL + A Sbjct: 137 FKKILKE----DSENIMALHFLGIIYIEKKDFKSARESFKTILKLNPDYEPAYTNLGAVE 192 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVES 327 + AE+ +K ++NP A I +L ++ +K L+E ES + Sbjct: 193 ELAGNLKDAELYFKKALELNPENLFARERLINLYLSQKSYKEAIKELETLKEQKSESEQI 252 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + L++ D+A + + P Sbjct: 253 HEKLALLYLQIKQYDKATEELEYLLSKHP 281 >gi|21229674|ref|NP_635591.1| porphyrin biosynthesis protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766551|ref|YP_241313.1| porphyrin biosynthesis protein [Xanthomonas campestris pv. campestris str. 8004] gi|188989613|ref|YP_001901623.1| membrane-anchored conserved protein [Xanthomonas campestris pv. campestris str. B100] gi|21111157|gb|AAM39515.1| porphyrin biosynthesis protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571883|gb|AAY47293.1| porphyrin biosynthesis protein [Xanthomonas campestris pv. campestris str. 8004] gi|167731373|emb|CAP49548.1| membrane-anchored conserved protein [Xanthomonas campestris pv. campestris] Length = 421 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 54/361 (14%), Positives = 108/361 (29%), Gaps = 31/361 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G YR + + IL L LL+ Sbjct: 7 VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQAVLILVIALLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVNASEDEEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE----SCRIGDLNS 172 L V++A A A + + + T L + + D + Sbjct: 120 ALAS--AVRVADARGDVASATALAQQLAERDPTAHALLQGERHLAQQRPVDAINALDSAA 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ + L + A A L ++ A + L Sbjct: 178 AQPLPARGLLLRTHA----------LAQIGRADEAYGQLGALRQQAVLAPEAYSALEATL 227 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291 + + + + + E+L + A + A A+ + A LE+ Sbjct: 228 AEQTLLQAGDANALAERWEALPKALRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQW 287 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +Y L E + A R + +S L+ +++++ QA A Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQHPDSPGLLLTLARLSRHQQQWSQAEEFLHRA 347 Query: 352 M 352 + Sbjct: 348 L 348 >gi|15892637|ref|NP_360351.1| hypothetical protein RC0714 [Rickettsia conorii str. Malish 7] gi|15619806|gb|AAL03252.1| unknown [Rickettsia conorii str. Malish 7] Length = 334 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 86/260 (33%), Gaps = 11/260 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ F + + V I+ + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGFTFIERFDSKVFISLYDYSIETTLFFSLILSLLLLISCFIVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116 + P+ + ++ KR + AL +++ A + A + +S + Sbjct: 61 FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFAEYIMNNKAKSASIVRKNLSSEDLK 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ L+ + + ++ + +L A+ Y Sbjct: 118 DSQEFHNLILAVTEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSFYEQAENY 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235 ATKA + + +++ Y W++ I N+ K + E A + + + Sbjct: 175 ATKAYNFNELDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234 Query: 236 NADKGDMIASYHDAIESLKL 255 + + + ++ L Sbjct: 235 EVESNNTANAIDYLATAVDL 254 >gi|285808330|gb|ADC35860.1| TPR repeat-containing protein [uncultured bacterium 92] Length = 755 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 98/302 (32%), Gaps = 21/302 (6%) Query: 95 IAAHNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA- 151 + + AR++ ++ + F L L Q + AH+ L+ +L+ Sbjct: 279 VFVGRLDDARRVLEPLTAKDAFVASRTRLAALTYAQ------DHAAAHKLLDAVLKRDPK 332 Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R + + L+ A A+ P + + A+ Sbjct: 333 YARALLLRGQFL--LEEHKLDEALTQVKAAIAADPSMAEAQYFLGMVQDARQRPDEAMAA 390 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + L S N D+G + A + N + + A+SL Sbjct: 391 FTEVLRLNPRATAAQVQL----SRLNLDRGRRDTALQYAESAASAYPNDPVTQLALARSL 446 Query: 271 ISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKR---ALRLEEINKESVE 326 I+ +A +L + P P I + + + R A L ++ +++E Sbjct: 447 IANGNVDRAGQVLTNLQAAQPRLPAIRVLLGKVAAARRDEAAARRHFADALV-LDPDNLE 505 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 +L + + L A + + +P+ LLLA A + + Q A+ Sbjct: 506 ALSSLVGLDLVAHQPQAARTRVDDRVSKSPKDSNVLLLAGRVHAVTGDVPGAEQLLQRAI 565 Query: 387 HA 388 A Sbjct: 566 EA 567 Score = 43.4 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 87/278 (31%), Gaps = 16/278 (5%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GY +L G++ + A + L Q LA Q + A L Sbjct: 167 GYASL--GIVRLEQGQQNEAEGAFRKAVAADPKSATARIAL--AQFLLATNQQSEAETSL 222 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-QQYVLAK 202 L+I A +L A+ + D P ++ + YV Sbjct: 223 NEALRIEPGNVLAHRALAALLMTTKRTADAEAHLKAVADSDPTPAATSKLTLSDYYVFVG 282 Query: 203 EWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A L K+A +R R L D A++ LK Sbjct: 283 RLDDARRVLEPLTAKDAFVASRTRLAALTYAQ-------DHAAAHKLLDAVLKRDPKYAR 335 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLE 318 A + + L+ ++K +A ++ +P A + ++ + + + Sbjct: 336 ALLLRGQFLLEEHKLDEALTQVKAAIAADPSMAEAQYFLGMVQDARQRPDEAMAAFTEVL 395 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +N + + V +S++ L+ G D A A A P Sbjct: 396 RLNPRATAAQVQLSRLNLDRGRRDTALQYAESAASAYP 433 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 89/319 (27%), Gaps = 39/319 (12%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 KR+ L G + H + A E +L VQ A + + Sbjct: 328 KRDPKYARALLLRGQFLLEEHKLDEALTQVKAAIAADPSMAEAQYFLGMVQDARQ--RPD 385 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A +L++ A L + G ++A +YA A P+ P A+ + Sbjct: 386 EAMAAFTEVLRLNPRATAAQVQLSRLNLDRGRRDTALQYAESAASAYPNDPVTQLALARS 445 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------------LIARSLEN------ 236 + RA L + R +L A +L Sbjct: 446 LIANGNVDRAGQVLTNLQAAQPRLPAIRVLLGKVAAARRDEAAARRHFADALVLDPDNLE 505 Query: 237 ---------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 A+ + + + A + AE +L++ Sbjct: 506 ALSSLVGLDLVAHQPQAARTRVDDRVSKSPKDSNVLLLAGRVHAVTGDVPGAEQLLQRAI 565 Query: 288 KV-----NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + + + ++ + +R ++ +SV + +V+ + + Sbjct: 566 EADSNNLQAYAALGQLF--ISEHKMPEARERFEQIIAKRPDSVPAQTMVAMLYEAEQNRS 623 Query: 343 QAHAKAMLAMKIAPRKEIF 361 +A + M+I + Sbjct: 624 EARKRYERVMQIDQDAAVA 642 >gi|308274171|emb|CBX30770.1| hypothetical protein N47_E42820 [uncultured Desulfobacterium sp.] Length = 765 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 9/254 (3%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 Y+ E V L ++ LA + A + + A+ L Sbjct: 263 QYLKCLEISPKEVPVRLRLAELYLAWGKKEKAEAAFKETVDKNPQDIKALSRLASFYIDD 322 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 + + K L I+P + + Y++ +++ A + K+ + A+ Sbjct: 323 KKYDEGMKETEKILKINPKSQEGLVLKGRLYLVRNKFTEAQSLFQSFLKDNPKA----AL 378 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN----KKRKAEVIL 283 ++ + + + E++KL A + + +A +L Sbjct: 379 GYYLLAMAHYGNKETQQAKTALAEAIKLNTKWSEPRFLLANIYMREGAYSEAVNEAMGVL 438 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ NP + ++L+ +N K L +I + + + ++ L + Sbjct: 439 KEQ-PKNPKAYLIMGNSYLMQKNIPEAQKSFEELLKIAPNNPFAYSQMGRLMLVEKKEKE 497 Query: 344 AHAKAMLAMKIAPR 357 A A+K+ P Sbjct: 498 ALENFEKALKLQPD 511 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 110/305 (36%), Gaps = 20/305 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + + + N A++ V + + L +LL I ++E+ + A + E Sbjct: 113 GTLYLLSGNPDKAKEQVDIVLSKDAKN--SLAHLLLSGIYVSEKNLDNAVTEAEK-ATEG 169 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-IT 209 + A L D+ A+ A++ + + ++ Q Y+ + A Sbjct: 170 EMKLEAYLHLANLYIMKKDIAKAEEMLIAAVNSNEKSMVARFSLAQFYLRTGKIDNAERE 229 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAA 267 FLN K + K+ +L N + ++ L++ + + A Sbjct: 230 FLNAVKADPKDVK-------AYMALGNFYFITKRPEDAEKQYLKCLEISPKEVPVRLRLA 282 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322 + ++ KK KAE ++ NP +A+ Y + +K ++ +IN Sbjct: 283 ELYLAWGKKEKAEAAFKETVDKNPQDIKALSRLASFYIDDKKYD--EGMKETEKILKINP 340 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 +S E LV+ ++ L +A + +K P+ + L + + T + Sbjct: 341 KSQEGLVLKGRLYLVRNKFTEAQSLFQSFLKDNPKAALGYYLLAMAHYGNKETQQAKTAL 400 Query: 383 QSALH 387 A+ Sbjct: 401 AEAIK 405 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 25/321 (7%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GY L + A+ + + +T +E L I + E Y+ A Sbjct: 379 GYYLLA--MAHYGNKETQQAKTALAEAIKLNTKWSEP--RFLLANIYMREGAYSEAVN-- 432 Query: 144 EMML------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 E M + P S + ++ AQ+ + L I+P+ P+ + + Sbjct: 433 EAMGVLKEQPKNPKAYLIMGNSYLMQK----NIPEAQKSFEELLKIAPNNPFAYSQMGRL 488 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ K+ A+ + K ++ ++ + D ++ E +K+ Sbjct: 489 MLVEKKEKEALENFEKALKLQPDYTEPLQFIVSVM----MNNKDYKKAFERVDEQIKISP 544 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRA 314 + A + AE +K ++N P ++A +L + K Sbjct: 545 KNPFLYNIRASLYEFEKDLTNAENDFKKAIELNRDSPALQMALGNFYLRHKTMDKAKKSY 604 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSH 373 + +S+ + + + I D+A + +KI P LA I Sbjct: 605 EETIKKAPDSLNAQMALGMIYENEKKYDEAKSHYEKVLKINPDFAPAANNLAYIYAEKGG 664 Query: 374 NTDKILYWTQSALH-AMPDPL 393 N D+ L Q A DP Sbjct: 665 NIDEALNLAQKAKELVPEDPH 685 >gi|297304121|ref|XP_002806323.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Macaca mulatta] Length = 963 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|70730204|ref|YP_259943.1| TPR domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68344503|gb|AAY92109.1| TPR domain protein [Pseudomonas fluorescens Pf-5] Length = 785 Score = 58.4 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 73/190 (38%), Gaps = 11/190 (5%) Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 KA+ I+ + A W +A+ + + R A L +A + + Sbjct: 569 KAVRITAARDLLGAARSGLGPAQGAWDKALGEYEAVQLS--LVERAEANLNLAMLYQASG 626 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 +G + Y A +L+ + A + + L + + ++A+ +L + + HPE A + Sbjct: 627 RGAEVEPYLRA--ALRRDSDFFPALVTLGQWLEANGRSQEAQQLLAQ--ALQQHPESALL 682 Query: 299 -----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + +T + + E+ ++ + +++ + G D A+ + ++ Sbjct: 683 QHTRGLSLIRGGDTARAMAALKKAAELEPQNPQYAYVLAVALHDSGQQDAANRQLQALLQ 742 Query: 354 IAPRKEIFLL 363 P + L Sbjct: 743 RQPTQRNARL 752 >gi|323498286|ref|ZP_08103288.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326] gi|323316714|gb|EGA69723.1| tetratricopeptide repeat protein [Vibrio sinaloensis DSM 21326] Length = 389 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 101/338 (29%), Gaps = 57/338 (16%) Query: 98 HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + + + + + + A + E +++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMVSGFLDRAEKIFEQLVEEPDHREA 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI--TFLNQ 213 A+ + +V Y +EWS+AI L Sbjct: 143 AL----------------------------------QQLVSIYQQTREWSKAIHYATLLV 168 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K + N A +++ G+ + + ++L + ASI KS + Sbjct: 169 KLGRKRMRNSI-AHFWCELAMQEKADGNDAKAAQNFKKALSEDPKCVRASIALGKSYLEN 227 Query: 274 NKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 A +E + + P +A Y HL E+ + + R + S E Sbjct: 228 EDYSNAIKYMEMVLEQDSDFVSEVLPTLAECYHHLGQEDALLEFLR-QCIVSKAGASAE- 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQSA 385 ++++++ + A + P + F L + +A L Q Sbjct: 286 -LMLAQLVAQHEGSGAAQELLTRQLVKNPTMKGFYRLIDYHLMEAEEGRAKASLGTLQKL 344 Query: 386 LHAMP--DPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + P + S+ W P K Sbjct: 345 VGEQLKVKPHYRCRKCGFSTHSMYWH--CPSCKGWGTI 380 >gi|261819439|ref|YP_003257545.1| cellulose synthase subunit BcsC [Pectobacterium wasabiae WPP163] gi|261603452|gb|ACX85938.1| cellulose synthase operon C domain protein [Pectobacterium wasabiae WPP163] Length = 1159 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 116/316 (36%), Gaps = 42/316 (13%) Query: 91 GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI------- 138 GL+ + A + A + + + V++ ++ E L+ + +AE + Sbjct: 314 GLIYLRAGDRVTALAQFQKALQADVNRLNSGKWEGLIQSTQYWATIAEGDNALKANNLPL 373 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + Q+ T +A+ L + + +AQ++ +AL + P +V Y Sbjct: 374 AQQKYQQARQMDNTNAYALIGLGDVAVASKNDATAQQFYQQALHLEPGNDNALRGLVGIY 433 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAI-----LLIARSLENADKGDMIASYHDAIESL 253 +A+ +LN ++ + R +L ++ + +++ + ++ Sbjct: 434 QRQSP-EKALAYLNSLSRSQQNTMRETLTALQLDILKQQADQLSEQQQWAQAEEKYRQAN 492 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENT 307 + N + + A++L + ++A+ +++ P P A +Y + + Sbjct: 493 QQDPNDVWLAYHYAQTLRQLGQTQQADNTVQRA-TAVP-PASAEKNYVYSLYLSSTNRDE 550 Query: 308 VGKLKRALRL--EEINKE--------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L L + + + ++++ + ++ + G A A Sbjct: 551 QA-LAHLNALPTAQWSADMRDLSQRLTIQTTLAKAEAMRDAGDEPAAIAFLRQQPVDT-- 607 Query: 358 KEIFLLLAQ--IEQAN 371 I LLLA + + Sbjct: 608 -RIDLLLADWALARGE 622 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 35/134 (26%), Gaps = 6/134 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + A L L + G+ +A + Sbjct: 579 TTLAKAEAMRDAGDEPAAIAFLRQQPVDTRIDLL----LADWALARGEYTTALTEYQRIR 634 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240 P P + ++ A LNQ + A N R + +++ N K Sbjct: 635 TREPQNPDAQLGEIDAFIAQGRQDDARQRLNQLPTQAADTLNGKRRVANAWQAVGNPQKS 694 Query: 241 DMIASYHDAIESLK 254 I++ K Sbjct: 695 -TALFRQLKIDAQK 707 >gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii WH 8501] gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii WH 8501] Length = 353 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 83/230 (36%), Gaps = 7/230 (3%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A E +Y A ++ I + A + + + G L A KA+++ P+ + Sbjct: 36 AQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYSF 95 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + AI K A E + N A L D+G + + Sbjct: 96 AYNNMGNALRKQGKLEEAI----AAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAY 151 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA--NIYTHLLSENT 307 ++++L N A +L Q K +A +K +++P+ A N+ L + Sbjct: 152 KKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGK 211 Query: 308 VG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + EIN + + + G D+A A A++I P Sbjct: 212 YDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINP 261 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 71/226 (31%), Gaps = 15/226 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + +Y N+ Y + + A + +++ A Y+ Sbjct: 108 GKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYN 167 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + R G L A KA+++ P+ + + ++ AI + + Sbjct: 168 MGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAIEINP 227 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +G + +++++ N +L Q K +A Sbjct: 228 NY----AFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYNNMGLALDDQGKYDEA 283 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 +K +++P+ +A LK A RL IN Sbjct: 284 IAAHKKALEIDPNLVLAQ-----------NNLKEAERLLAINNNPP 318 >gi|253686481|ref|YP_003015671.1| cellulose synthase operon C domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753059|gb|ACT11135.1| cellulose synthase operon C domain protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 1164 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 115/314 (36%), Gaps = 38/314 (12%) Query: 91 GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYL-------VYLLEVQIALAERQYNI 138 GL+ + A + A + + + V++ ++ E L + E AL ++ Sbjct: 314 GLVYLRAGDRAKALTQFQKALQADVNRLNSGKWEGLIQSTQYWTTIAEGDNALKANNLSL 373 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + Q+ T +A+ L + + +AQ +AL + P +V Y Sbjct: 374 ARQKYQQARQMDNTNAYALIGLGDVAVASKNDAAAQPLYQQALHLEPGNDNALRGLVGIY 433 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAI-----LLIARSLENADKGDMIASYHDAIESL 253 +A+ +LN ++ + R +L ++ + +++ + ++ Sbjct: 434 QRQSP-EKALAYLNSLPRSQQNTMRETLAALQLNILKQQADQLSEQQQWTQAEEKYRQAS 492 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVG 309 + N I + A++L + ++A+ ++++ V P + ++Y + + Sbjct: 493 QQDPNDIWLAYHYAQTLRQLGQTQQADSVVQRATAVPPTSAEKNYVYSLYLSSTNRDEQA 552 Query: 310 KLKRALRL--EEINKESVE--------SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L L + + + E + + ++ + G A A + Sbjct: 553 -LAHLNTLPTAQWSDDMRELSQRLTIQTTLAKAEAMRDAGDEPAAIAFLR---QQPADTR 608 Query: 360 IFLLLAQ--IEQAN 371 I LLLA + + Sbjct: 609 IDLLLADWALARGE 622 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 37/156 (23%), Gaps = 6/156 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + A L L + G+ +A + Sbjct: 579 TTLAKAEAMRDAGDEPAAIAFLRQQPADTRIDLL----LADWALARGEYATALAEYQRIR 634 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240 P P + ++ A LNQ + N R + +++ N K Sbjct: 635 TREPQNPDAQLGEIDAFIAQGRQDDARQRLNQLPTQAVDTLNSQRRVANAWQAVGNPQKS 694 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + I++ K A + Sbjct: 695 AALF-RQLKIDAQKEPVGQTPIDQTTALIYRDAARV 729 >gi|261342010|ref|ZP_05969868.1| putative cellulose synthase operon C protein [Enterobacter cancerogenus ATCC 35316] gi|288315927|gb|EFC54865.1| putative cellulose synthase operon C protein [Enterobacter cancerogenus ATCC 35316] Length = 1160 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 9/200 (4%) Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL Q AL A + I T +AV L + D +A+RY +AL Sbjct: 354 LLIQQGDAALKANDTAQAERFYQQARNIDNTDSYAVLGLGDAATARNDNAAAERYYRQAL 413 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQKKKNAKEWNRNRAIL---LIARSLEN 236 + + + Y A I L+ ++ + + + R + L A++ + Sbjct: 414 RMDSGNSNAVRGLARLYRAQSPEKAAEFIQSLSASQRRSID-DIERGLTNDRLSAQAEQL 472 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 ++G + L L + + ++ L S + +A+ ++ ++ P PE Sbjct: 473 ENEGKFAQAADIQRRRLALSPGDVWITYRLSRDLYSAGQHGQADNLMRQLASQKPGDPEQ 532 Query: 296 ANIYTHLLSENTVGKLKRAL 315 Y LS N + A Sbjct: 533 VYAYGLYLSGNNQDRAALAH 552 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 46/158 (29%), Gaps = 8/158 (5%) Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + + L A A +LQ E A+ L Sbjct: 585 RDSGKEQEAETLLRQQPTSTRIDLTLADWAQQRGDNATAKTAYGTVLQREPQNEDALLGL 644 Query: 161 YFESCRIGDLNSAQRYATK--ALDI-SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KK 215 GD +A+ K A + P + V V + + A ++ + Sbjct: 645 TEVYIAEGDRQAARAELAKLPATENGQPRSLNVQRRVAMAQAGLGDTAAADQTFSKLIPQ 704 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 ++ + A++L + A G + +++ Sbjct: 705 ATSQPPSMENALVLRDAARFQAQNGQPQQALETYKDAM 742 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 76/206 (36%), Gaps = 20/206 (9%) Query: 90 TGLMSIAA-HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 +S+ + + A + +QQ + E A+ Q + A +L+ + Sbjct: 240 QKYLSVFSDGDSVTAAR-SQLEAQQKQLADPTFRAKAEGLAAVDAGQGSKAVAELQKAVS 298 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP----WVTEAVVQ-----QYV 199 T A+ +L + GD A KA+ + P + W +++++ + Sbjct: 299 ANHTDSEAIGALGQAYSQKGDRARAVAQFEKAIALDPQSDNRGKW--DSLLKVNRYWLLI 356 Query: 200 LAKEWS-RAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + +A ++ + + A+L + + + D A+ ++L+ Sbjct: 357 QQGDAALKANDTAQAERFYQQARNIDNTDSYAVLGLGDAAT--ARNDNAAAERYYRQALR 414 Query: 255 LCDNSIMASICAAKSLISQNKKRKAE 280 + + A A+ +Q+ ++ AE Sbjct: 415 MDSGNSNAVRGLARLYRAQSPEKAAE 440 >gi|220933218|ref|YP_002512117.1| HemY-like protein [Thioalkalivibrio sp. HL-EbGR7] gi|219994528|gb|ACL71130.1| HemY-like protein [Thioalkalivibrio sp. HL-EbGR7] Length = 390 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 119/358 (33%), Gaps = 10/358 (2%) Query: 25 PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84 P + +GN TS V L L F LL + P + + + + Sbjct: 26 PGYALLAYGNLSVETSLAVFLVALVLLFFGLYLLLRLLTRLWGLPGGVRDLRRRHQAEAA 85 Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKL 143 + L GL+ +A A K+ +++ L++ L + A Y L Sbjct: 86 RRGLNQGLIEMAEGRWERAEKLLVRSARR---SQTPLIHWLSAARAAQMLGAYTRRDHYL 142 Query: 144 EMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + + AV ++ G A ++ P ++ + + + Sbjct: 143 AEASRCESGSDVAVE--LTQAELQIAHGQHEQALATLNHLNELVPRHRYLLKLRARLHER 200 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + + L + ++ + A + + E K + E L Sbjct: 201 LNDCAALFELLPELRRAKVLPETDLADMENRATRELLAKAADADAVRRLWERLPRDARHR 260 Query: 261 MASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + A A++LI + +AE +L K + ++Y L E+ L+ A + Sbjct: 261 PRLVEAHARALIRLKEINQAEHLLRSALKSGWDEGLVHLYGTLPVEDPARALETAEGWSK 320 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + L+ + ++A +A A + + PR E + LA++ + N Sbjct: 321 QHGRDAALLLTLGRLARRAKLWGKARAYLEASTGLRPRPETYRELAELLEEMGENERA 378 >gi|282899497|ref|ZP_06307462.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281195604|gb|EFA70536.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 280 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 12/162 (7%) Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A LQ P T + S GD A +A+ +S Sbjct: 102 AYFDLNNKERAINDYNQSLQINPNDPET--YNYRGNARASL--GDQKGAIEDYNEAIRLS 157 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P+ + + A+ Q + + + ++ R + G+ Sbjct: 158 PNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNY----SVAYNNRGNAYSSLGNTSK 213 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D ++++L A + S KR+A L+K Sbjct: 214 AIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDLQKA 255 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 10/177 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L+ Q + + A L F L + + + A ++L Sbjct: 64 LQGQNQHSRGNFQAAIAAYSKSISLNSDYAPAFKARGLAY--FDLNNKERAINDYNQSLQ 121 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 I+P+ P + AI N+ + + + A R +A +G+ Sbjct: 122 INPNDPETYNYRGNARASLGDQKGAIEDYNEAIRLSPNY----AEAFNNRGNSHAAQGNK 177 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 A+ D +++++ N +A + S KA + ++N P+ A Y Sbjct: 178 NAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSKAIADYNQAIRLN--PQFAPAY 232 >gi|302342733|ref|YP_003807262.1| hypothetical protein Deba_1300 [Desulfarculus baarsii DSM 2075] gi|301639346|gb|ADK84668.1| TPR repeat-containing protein [Desulfarculus baarsii DSM 2075] Length = 405 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 89/266 (33%), Gaps = 18/266 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNR 223 + G N A + L P +V Y ++W+ A + + K ++ Sbjct: 141 RKGGLFNRAVEAFQEVLSRDPGHQDALRQLVGLYEEMRDWASAYETMRRLSKLTGEDNRL 200 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + G + A+ +++ + + A + +++ + RKA + Sbjct: 201 VLAHHKTELGKDLQAAGKLDAAEQAMSQAISVHKKCLDAYLHLGDLELARGRNRKAINLW 260 Query: 284 EKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVE--SLVIVSKIA 335 K ++ P +Y HL ++E T+G+ A L ++ + E +L+ ++K Sbjct: 261 RKAVQMAP------VYAHLVISRLDMAEETLGRKVVADFLAGVDLDQAEPATLLALAKSR 314 Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQ-SALHAMPDPL 393 G QA A+ P E L I A N + + + A Sbjct: 315 QRHGEHKQALQLLEAAIVKEPGCLEAHQLRGDILLAAGDNDACLKAYVELLAQVQGYGAQ 374 Query: 394 WISD-DGYLSSVWLPLSPISKTLCYF 418 + G++S P Sbjct: 375 YQCGQCGFVSHQLAWKCPRCHGWDTM 400 >gi|33593517|ref|NP_881161.1| hypothetical protein BP2534 [Bordetella pertussis Tohama I] gi|33572873|emb|CAE42809.1| putative exported protein [Bordetella pertussis Tohama I] gi|332382925|gb|AEE67772.1| hypothetical protein BPTD_2494 [Bordetella pertussis CS] Length = 531 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 44/378 (11%), Positives = 104/378 (27%), Gaps = 18/378 (4%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 + +V + S + + +L + + + ++ P L +R ++ Sbjct: 24 HAGNVLLLVWPWRIELSLTLTVLLLVAAFVTLYVGLRLLAWLVAIPDRLRAWRGRRAQER 83 Query: 84 GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 ++ L G + + A K + Q + L L + A +Y ++ Sbjct: 84 DHELLERGWIGLLEGRFAQAEKDLSKLFDQTKVRSSRVLAALSGARAAHNLGEYER-RDR 142 Query: 143 LEMMLQIPATREFAVYSLYFES---------CRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + + E+ G A D Sbjct: 143 MLESAREQAGEDAGL----QEATATVSADMLLDQGRAQQALDLLEPLQDGGARHLHTMRL 198 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ + R + L+ + G + + + L Sbjct: 199 LLRAETALQHHERVFMLARGLLRRNAIGKAEAEQLIDSAGAARLRAGMAVDQWRPIWKDL 258 Query: 254 KLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 K + + ++ A + + +A ILE V +P + Y + +L Sbjct: 259 KSDERLLPNIALAGAAAFEDAGEANEAARILEAAVAVKFNPALVAAYARCDAAQVPHRLA 318 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 +A + + L + + L QA ++ + LL + Sbjct: 319 KAETWLQQRPADTDLLTALGLLCLNGQLWRQAERYLQRSVSRRNDPQAHALLGSLYDRLD 378 Query: 373 HNTDKILYWTQSALHAMP 390 D +W A Sbjct: 379 RPADAARHW--RQATAAR 394 >gi|218246665|ref|YP_002372036.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|257059707|ref|YP_003137595.1| hypothetical protein Cyan8802_1863 [Cyanothece sp. PCC 8802] gi|218167143|gb|ACK65880.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|256589873|gb|ACV00760.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 344 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 88/241 (36%), Gaps = 16/241 (6%) Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L E +Y+ A + +L+ P T++ + + + D A + A Sbjct: 20 LARMALQLVQENRYDEALLAFQEILEQDPNTKQAHL-GIGRIYLKQKDYQGALTHFQTAR 78 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++ P + A+ Y K+ + Q ++A + + A + + Sbjct: 79 NLDPMMVQASLAIGNAYYELKQ----LELSMQAFQDAVNIDPSDATGYLGIGRVLIKQKQ 134 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299 + ++L L I+A + A+ Q +A +E + K+NP ++N Y Sbjct: 135 YPQAKEQLQKALVLNPQLILARLLMAQIYQEQGDIDQAITEIESVLKLNPT--LSNAYQG 192 Query: 300 ---THLLSENTVGKLKRALRLEEINKESV-ESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +L E K + +++N + + + ++ ++ ++D+A A Sbjct: 193 LGNLYLKQEKYALARKNFEQAQQLNPKIPAAAKLPYLEVLVQDNALDEATAILKEMPNQK 252 Query: 356 P 356 P Sbjct: 253 P 253 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 46/151 (30%), Gaps = 1/151 (0%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + L LL QI + + A ++E +L++ T A L Sbjct: 137 QAKEQLQKALVLNPQLILARLLMAQIYQEQGDIDQAITEIESVLKLNPTLSNAYQGLGNL 196 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEA-VVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + A++ +A ++P P + ++ V A L + Sbjct: 197 YLKQEKYALARKNFEQAQQLNPKIPAAAKLPYLEVLVQDNALDEATAILKEMPNQKPLEV 256 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESL 253 R + + + + + + A+ + Sbjct: 257 RKQKLWGDIYVRQGFLEEALQSYRSAALLAA 287 >gi|74007680|ref|XP_858842.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase isoform 9 [Canis familiaris] Length = 933 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|332019094|gb|EGI59622.1| Pre-mRNA-processing factor 6 [Acromyrmex echinatior] Length = 931 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 34/200 (17%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224 GD+ +A+ + A +P++ + A V+ E+ RA L + + +A Sbjct: 610 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMK 669 Query: 225 ------------RAILLIARSLENADK---------------GDMIASYHDAIESLKLCD 257 A+ L+ +LE D G + + +++K C Sbjct: 670 SAKLEWALNNLDAALHLLKEALEAFDDFPKLWLMKGQIEEQQGYLDKAIDTYNQAIKKCP 729 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR--AL 315 NSI A+ +N+ KA +LEK N P+ A ++ + R A Sbjct: 730 NSIPLWCLLARLEHRKNQVTKARSVLEKARLKN--PKNAELWLEAIRNELKKGGARDMAN 787 Query: 316 RLEEIN-KESVESLVIVSKI 334 L +E S ++ ++ Sbjct: 788 TLMAKALQECPTSGLLWAEA 807 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 335 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + +S++ S+ I AA KR + K Sbjct: 336 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETEVKAKR---RVYRKA 385 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SV+ + ++++ + D A Sbjct: 386 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468 >gi|83814061|ref|YP_446792.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855] Length = 554 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 8/224 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G ++ A + SY + Y + A E L + Sbjct: 332 RGNAEANQGDLEAA--VESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDL 389 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + A Y L A A+++ + P A + A+ Sbjct: 390 KSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALE 449 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 ++A + + + +K + ++L+L S AK+ Sbjct: 450 ----SYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKA 505 Query: 270 LISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKL 311 L++ + ++ L+ ++++P E Y L + V +L Sbjct: 506 LLALGRADESIRALKTAFRLDPAKKEEFQKAYPTLYDNDRVRRL 549 >gi|315634978|ref|ZP_07890259.1| HemY protein [Aggregatibacter segnis ATCC 33393] gi|315476240|gb|EFU66991.1| HemY protein [Aggregatibacter segnis ATCC 33393] Length = 424 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 70/226 (30%), Gaps = 13/226 (5%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 ++ V I + + S ++ L + V F + +R Sbjct: 20 YLAGKQGYVRIETASHIVEMSITTLVIFFVLALALVYSIEVVISRFFRLSNNTYSWFSRR 79 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 K K GLM + + A K+ ++ L ++ + A A Sbjct: 80 KRTKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SDEPVLNFIKAAEAAQQRGDEFSA 137 Query: 140 HEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQRYATKALDISPDAPWVTEA 193 + +M AT SL E + L +A+ L ++ V + Sbjct: 138 NRY--LM---EATEIAGSDSLVLEIARIRILLQQNKLPAARSSVDSLLLMAGKNKEVLKL 192 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 V+ Y+ +K + L+Q +K+ ++ L D+ Sbjct: 193 AVEIYLKSKAYQALDNILDQIEKSGLYASQEFVALQTQVEDGLLDE 238 >gi|307252643|ref|ZP_07534536.1| hypothetical protein appser6_11570 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859888|gb|EFM91908.1| hypothetical protein appser6_11570 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 409 Score = 58.4 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ +I +S V I ++ S +++ + + + F Sbjct: 2 LLLLASLIFG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ + A K+ S ++ +E ++ L++ Sbjct: 61 LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 + A A++ L + G N A A + + Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P A +++++ + + K++K +N IL Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203 >gi|156554377|ref|XP_001604212.1| PREDICTED: similar to pre-mrna splicing factor [Nasonia vitripennis] Length = 932 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 93/255 (36%), Gaps = 37/255 (14%) Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E LE +LQ P + + + GD+ +A+ + A +P++ Sbjct: 574 KTYGTRESLETLLQRAVAHCPKSEVLWLMG-AKSKWQAGDVPAARGILSLAFQANPNSED 632 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLE 235 + A V+ E+ RA L + + +A A+ L+ +++ Sbjct: 633 IWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAALQLLKEAID 692 Query: 236 NAD---------------KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + KG + + +K C SI A + +N+ KA Sbjct: 693 TFENFPKLWLMKGQIEEQKGQQEKALETYNQGIKKCPTSIPLWRLLAHLEMKRNQFTKAR 752 Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +LEK NP +PE+ ++ + + + +E S ++ ++ A+ M Sbjct: 753 SVLEKARLRNPKNPELWLEAIRNEMKSGGNRDMANTLMAKALQECPNSGLLWAE-AIFME 811 Query: 340 SIDQAHAKAMLAMKI 354 + Q K++ A+K Sbjct: 812 ARPQRRTKSIDALKK 826 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVVGKVQMARNLIMKGCEVNPSSEDLW- 335 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++++ S+ I AA KRK + K Sbjct: 336 -------LEAARLQPPDTAKAVIAQAVRHISTSVRIWIKAADLETESTAKRK---VYRKA 385 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SV+ + ++++ + D A Sbjct: 386 LEHIPNSVRLWRAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468 >gi|163848946|ref|YP_001636990.1| NB-ARC domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526899|ref|YP_002571370.1| NB-ARC domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163670235|gb|ABY36601.1| NB-ARC domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450778|gb|ACM55044.1| NB-ARC domain protein [Chloroflexus sp. Y-400-fl] Length = 1634 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 95/329 (28%), Gaps = 55/329 (16%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF-----HNEYLVYLLE-VQIAL 131 +R+ + G ++ AA + P AR+ + H E V L E ++A Sbjct: 735 RRHRETAVTLHELGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHELGKVAQ 794 Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182 A Y A E L I L + GD +A+RY + L+ Sbjct: 795 AAGDYPTARRYYEEALAIKD-DVLGRRHRSTAVTLHALGNLAQEEGDYPTARRYFLEDLE 853 Query: 183 I--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLI 230 I A+ + A ++ A + + + +R A+ L Sbjct: 854 ITEAVLGRRHRSTAVTLHALGKVAQAAGDYPTARCYYEEALAIKDDVLGRRHRETAVTLH 913 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSI------MASICAA--KSLISQNKKRKAEVI 282 A GD + E+L + D+ + A A K + A Sbjct: 914 ALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPTARRY 973 Query: 283 LEKIWKV------NPHPEIANIY------THLLSENTVGKLKRALRLE----EINKESVE 326 E+ + H E A + + L + + E Sbjct: 974 YEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRE 1033 Query: 327 SLV---IVSKIALEMGSIDQAHAKAMLAM 352 + V + K+A G A A+ Sbjct: 1034 TAVTLHALGKVAQAAGDYPTARRYYEEAL 1062 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 90/312 (28%), Gaps = 57/312 (18%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKM--HSYVSQQHTFHN----EYLVYLLEVQIAL 131 +R+ + G ++ AA + P AR+ + + + ++A Sbjct: 987 RRHRETAVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQ 1046 Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182 A Y A E L I L + GD +A+RY +AL Sbjct: 1047 AAGDYPTARRYYEEALAIKD-DVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEALA 1105 Query: 183 IS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLI 230 I + + A ++ A + + + + +R A+ L Sbjct: 1106 IKDDVLGRRHRSTAVTLHELGKVAQAAGDYPTARRYFLEDLEITEAVLGRRHRETAVTLH 1165 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A GD + +E L+ L +++ E ++ Sbjct: 1166 ALGKVAQAAGDYPTARRYFLEDLE----------ITEAVLGRRHR--------ETAVTLH 1207 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRL----EEINKESVESLVIVSKI---ALEMGSIDQ 343 E+ + + + L + + E+ V + ++ A G Sbjct: 1208 ---ELGKV-AQAAGDYPTARRYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPT 1263 Query: 344 AHAKAMLAMKIA 355 A + ++I Sbjct: 1264 ARRYFLEDLEIT 1275 Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 57/296 (19%) Query: 91 GLMSIAAHNIPLARKMH------SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 G ++ + P AR+ + + + ++A A Y A E Sbjct: 832 GNLAQEEGDYPTARRYFLEDLEITEAVLGRRHRSTAVTLHALGKVAQAAGDYPTARCYYE 891 Query: 145 MMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALDIS-----PDAPWV 190 L I L + GD +A+RY +AL I Sbjct: 892 EALAIKD-DVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRET 950 Query: 191 T---EAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMI 243 A+ + A ++ A + + + +R A+ L A GD Sbjct: 951 AVTLHALGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYP 1010 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + E+L + D+ ++ + + + + Sbjct: 1011 TARRYYEEALAIKDDV-------------LGRRHRETAVTLHA--------LGKV-AQAA 1048 Query: 304 SENTVGKLKRALRLE----EINKESVESLV---IVSKIALEMGSIDQAHAKAMLAM 352 + + L + + E+ V + K+A G A A+ Sbjct: 1049 GDYPTARRYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPTARRYYEEAL 1104 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 28/223 (12%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-----MHSYVSQQHTFH 117 R+FL + +L +R+ + G ++ AA + P AR+ + + H Sbjct: 1224 RYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPTARRYFLEDLEITEAVLGRRH 1283 Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRI 167 E V L E ++A A Y A L+I L + Sbjct: 1284 RETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE-AVLGRRHRETAVTLHALGNLAQEE 1342 Query: 168 GDLNSAQRYATKALDIS-----PDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAK 219 GD +A+RY +AL I A+ ++ A + + + Sbjct: 1343 GDYPTARRYYEEALAIFEAVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEALAIFE 1402 Query: 220 EW----NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 +R A+ L GD + E+L + D+ Sbjct: 1403 AVLGRRHRETAVTLHELGKVAQAAGDYPTARRYYEEALAIKDD 1445 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 98/324 (30%), Gaps = 57/324 (17%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-----MHSYVSQQHTFH 117 R+FL + +L +R+ + G ++ AA + P AR+ + + H Sbjct: 1140 RYFLEDLEITEAVLGRRHRETAVTLHALGKVAQAAGDYPTARRYFLEDLEITEAVLGRRH 1199 Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRI 167 E V L E ++A A Y A L+I L + Sbjct: 1200 RETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE-AVLGRRHRETAVTLHELGKVAQAA 1258 Query: 168 GDLNSAQRYATKALD-----ISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAK 219 GD +A+RY + L+ + + + A ++ A + + + + Sbjct: 1259 GDYPTARRYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE 1318 Query: 220 EW----NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 +R A+ L A ++GD + E+L A + Sbjct: 1319 AVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEAL-------------AIFEAVLGR 1365 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIV 331 + + + + N+ + + L + + E+ V + Sbjct: 1366 RHRETAVTLHA--------LGNL-AQEEGDYPTARRYYEEALAIFEAVLGRRHRETAVTL 1416 Query: 332 SKI---ALEMGSIDQAHAKAMLAM 352 ++ A G A A+ Sbjct: 1417 HELGKVAQAAGDYPTARRYYEEAL 1440 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 96/324 (29%), Gaps = 57/324 (17%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-----MHSYVSQQHTFH 117 R+FL + +L +R+ + G ++ AA + P AR+ + + H Sbjct: 1182 RYFLEDLEITEAVLGRRHRETAVTLHELGKVAQAAGDYPTARRYFLEDLEITEAVLGRRH 1241 Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRI 167 E V L E ++A A Y A L+I L + Sbjct: 1242 RETAVTLHELGKVAQAAGDYPTARRYFLEDLEITE-AVLGRRHRETAVTLHELGKVAQAA 1300 Query: 168 GDLNSAQRYATKALD-----ISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAK 219 GD +A+RY + L+ + A+ ++ A + + + Sbjct: 1301 GDYPTARRYFLEDLEITEAVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEALAIFE 1360 Query: 220 EW----NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 +R A+ L A ++GD + E+L A + Sbjct: 1361 AVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEAL-------------AIFEAVLGR 1407 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLV-- 329 + + + E+ + + + L + + E+ V Sbjct: 1408 RHRETAVTLH--------ELGKV-AQAAGDYPTARRYYEEALAIKDDVLGRRHRETAVTL 1458 Query: 330 -IVSKIALEMGSIDQAHAKAMLAM 352 + +A E G A A+ Sbjct: 1459 HALGNLAQEEGDYPTARRYYEEAL 1482 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 51/249 (20%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182 A+ Y A E L I L + GD +A+RY +AL Sbjct: 711 ADDNYPTARCYYEEALAIKD-DVLGRRHRETAVTLHELGKVAQAAGDYPTARRYYEEALA 769 Query: 183 IS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIAR 232 I + + A ++ A + + + R+R+ + Sbjct: 770 IKDDVLGRRHRETAVTLHELGKVAQAAGDYPTARRYYEEALAIKDDVLGRRHRSTAVTLH 829 Query: 233 SLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 +L N ++GD + +E L+ I ++ ++ ++ + Sbjct: 830 ALGNLAQEEGDYPTARRYFLEDLE-----ITEAVL--------GRRHRSTAVTLHA---- 872 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLV---IVSKIALEMGSIDQ 343 + + + + L + + E+ V + K+A G Sbjct: 873 ----LGKV-AQAAGDYPTARCYYEEALAIKDDVLGRRHRETAVTLHALGKVAQAAGDYPT 927 Query: 344 AHAKAMLAM 352 A A+ Sbjct: 928 ARRYYEEAL 936 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 45/139 (32%), Gaps = 23/139 (16%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVYLLE-VQIAL 131 +R+ + G ++ + P AR+ + H E V L E ++A Sbjct: 1365 RRHRETAVTLHALGNLAQEEGDYPTARRYYEEALAIFEAVLGRRHRETAVTLHELGKVAQ 1424 Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYS---------LYFESCRIGDLNSAQRYATKALD 182 A Y A E L I L + GD +A+RY +AL Sbjct: 1425 AAGDYPTARRYYEEALAIKD-DVLGRRHRETAVTLHALGNLAQEEGDYPTARRYYEEALA 1483 Query: 183 ISPDAPWVTEAVVQQYVLA 201 I EAV+ + Sbjct: 1484 I-------FEAVLGRRHRE 1495 >gi|74007676|ref|XP_858769.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform 7 [Canis familiaris] Length = 943 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 509 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|186685791|ref|YP_001868987.1| hypothetical protein Npun_F5744 [Nostoc punctiforme PCC 73102] gi|186468243|gb|ACC84044.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 280 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 4/158 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A L+I A +L + A + ++A+ ++P+ Sbjct: 102 AYFDLGDKEKAIADYNQALRINPNDAEAYNNLGNARASLEGNREAVKDYSEAIRLNPNYA 161 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + AI L Q + + AI R A GD + D Sbjct: 162 EAYNNRGNARAANGDRKGAIDDLGQAIRLNPRY----AIAYNNRGNARAANGDPKGAIAD 217 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++++L N A + + ++ A LEK Sbjct: 218 YNQAIRLNPNFAPAYNNRGNARATNGDRQGALKDLEKA 255 >gi|332534327|ref|ZP_08410170.1| hypothetical protein PH505_bf00250 [Pseudoalteromonas haloplanktis ANT/505] gi|332036237|gb|EGI72710.1| hypothetical protein PH505_bf00250 [Pseudoalteromonas haloplanktis ANT/505] Length = 478 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 108/327 (33%), Gaps = 55/327 (16%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A N + + + + + LL Q+ L+ + +N A L+ Sbjct: 89 LQAGNYSE---VAALFKGRDISQDSTALNLLRAQVLLSTKDFNNAELAYLACLKASPDLV 145 Query: 155 FAVYSL----YFESCRIGDL-----------NSAQRYA-------------------TKA 180 A L ++ AQ YA +A Sbjct: 146 KAHQGLSLLYMQQAKYDKAQIHLVHSIELGQADAQSYAQLAYIHVQHSQPWSAVAAYRQA 205 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L ++P+ + ++ + + + S+A L + + + +A L + R+ Sbjct: 206 LMLAPETSQYQQGLLFALIESGDLSQANALLKELLNKSPD----KAELWLQRAQIALQLD 261 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------ 294 + +LKL + AA+ +++ +A +L++ K + Sbjct: 262 QKKQALAAIEVALKLNPKDTSNQLLAAQLHLTEGSTERAVSLLKQGLKHATKQQQVEVIN 321 Query: 295 -----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAK 347 + + + + + A RL + ++ V ++IA++ G+ +A Sbjct: 322 TTMQTLGWLVSQQKWDLAKDLIGSAKRLTKQLPRDEQAQFSVYSAQIAMQQGNTKRALKS 381 Query: 348 AMLAMKIAPRKEIFLL-LAQIEQANSH 373 A+KI P LL LA I ++ Sbjct: 382 LNNALKINPNLGDALLSLASIYRSKGQ 408 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 84/242 (34%), Gaps = 15/242 (6%) Query: 129 IALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + + A+ L+ +L P E + + ++ A AL ++P Sbjct: 222 ALIESGDLSQANALLKELLNKSPDKAELWLQ-RAQIALQLDQKKQALAAIEVALKLNPKD 280 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE-NADKGDMIASY 246 Q ++ RA++ L Q K+A + + I ++L + + Sbjct: 281 TSNQLLAAQLHLTEGSTERAVSLLKQGLKHATKQQQVEVINTTMQTLGWLVSQQKWDLAK 340 Query: 247 HDAIESLKLCDNS-----IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +L S+ +A+ + Q ++A L K+N P + + Sbjct: 341 DLIGSAKRLTKQLPRDEQAQFSVYSAQIAMQQGNTKRALKSLNNALKIN--PNLGDALLS 398 Query: 302 L----LSENTVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIAP 356 L S+ + + K + + S + +S+IA++ A A++ P Sbjct: 399 LASIYRSKGQLTQAKLMYVRAQALPDYQLSAWLGLSQIAIDSKDYPSALKHLRKALQADP 458 Query: 357 RK 358 ++ Sbjct: 459 QR 460 >gi|294508725|ref|YP_003572784.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] Length = 554 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 8/224 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G ++ A + SY + Y + A E L + Sbjct: 332 RGNAEANQGDLEAA--VESYERVLELEGPDAATYYNLALAYEEQGDLRAARTYYEKTLDL 389 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + A Y L A A+++ + P A + A+ Sbjct: 390 KSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALE 449 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 ++A + + + +K + ++L+L S AK+ Sbjct: 450 ----SYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKA 505 Query: 270 LISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKL 311 L++ + ++ L+ ++++P E Y L + V +L Sbjct: 506 LLALGRADESIRALKTAFRLDPAKKEEFQKAYPTLYDNDRVRRL 549 >gi|39998281|ref|NP_954232.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39985227|gb|AAR36582.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|298507217|gb|ADI85940.1| TPR domain protein [Geobacter sulfurreducens KN400] Length = 638 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 37/271 (13%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 + L G +AA P A + + ++ E L L Q A + A Sbjct: 267 EYLRRGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQAA--AGLDDDAIASYRE 324 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 +L++ Y+L R G ++ A +A+ +S + + Y L Sbjct: 325 LLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHP 384 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 +AI + K + +L + + + + E+LKL +++ A Sbjct: 385 QAIEQYRELLKRGD----SNPVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEA--- 437 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 H E+A +Y L + K+ + I K+ Sbjct: 438 --------------------------HRELAAVYRKLNQMDDAS--KQYREVLRIKKDDA 469 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E+ I++ I ++ D+ +++AP Sbjct: 470 EARNILTAIYVKEKKYDELVPLLQEGVELAP 500 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 4/188 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + Y + +++L + ++ + A L++ A L Sbjct: 385 QAIEQYRELLKRGDSNPVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAV 444 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 ++ ++ A + + L I D + YV K++ + L + E Sbjct: 445 YRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYVKEKKYDELVPLL----QEGVELAP 500 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A+ L + + D ++ ++ +L D+ A + + K +A+ L Sbjct: 501 NDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKALNALGRIYLKTGKLTEAKEAL 560 Query: 284 EKIWKVNP 291 E K +P Sbjct: 561 EAAKKADP 568 >gi|156743163|ref|YP_001433292.1| hypothetical protein Rcas_3220 [Roseiflexus castenholzii DSM 13941] gi|156234491|gb|ABU59274.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM 13941] Length = 1178 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 9/257 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 L + + A + ++ + E LV L IAL A+++ LQ Sbjct: 863 ALAYLGIGRLDAADESARRALERQPIYPEALVLL--GDIALQRGDSQAANQQYRAALQQN 920 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A L + G+ + A + A+ P +P + + V + AI+ Sbjct: 921 PALAAAHIGLGRVAAVGGNWSIAAGHFLNAVQADPQSPDAFLWLGEARVRVGDVDDAISA 980 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 Q + + L + G + + + +L+ A + K Sbjct: 981 YQQALQLRSAFPE----ALFGLAQAQFGAGRIDEALRNVNRALEQRSRYAEAFLLLGKIY 1036 Query: 271 ISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 Q +A ++ NP P + ++ + E+ Sbjct: 1037 EQQGYSTRALDAYKQAVDANPRLAEPHFRRALLLIRADRLSEARDDLEIAARLEPNFAEA 1096 Query: 328 LVIVSKIALEMGSIDQA 344 + ++ + A Sbjct: 1097 HYWLGRVYFAQRNFQAA 1113 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 25/234 (10%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI- 227 + A +A+ P A+ + A+ +L + +A + + RA+ Sbjct: 837 EYAPAVTAYERAIAQQPG-----NAIFRYRA-------ALAYLGIGRLDAADESARRALE 884 Query: 228 -------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 L+ +GD A+ +L+ A I + A Sbjct: 885 RQPIYPEALVLLGDIALQRGDSQAANQQYRAALQQNPALAAAHIGLGRVAAVGGNWSIAA 944 Query: 281 VILEKIWKVNPH-PE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + +P P+ + + + + + ++ E+L +++ Sbjct: 945 GHFLNAVQADPQSPDAFLWLGEARVRVGDVDDAISAYQQALQLRSAFPEALFGLAQAQFG 1004 Query: 338 MGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 G ID+A A++ R E FLLL +I + + + L + A+ A P Sbjct: 1005 AGRIDEALRNVNRALEQRSRYAEAFLLLGKIYE-QQGYSTRALDAYKQAVDANP 1057 >gi|307257053|ref|ZP_07538828.1| hypothetical protein appser10_10540 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307261491|ref|ZP_07543160.1| hypothetical protein appser12_10510 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306864424|gb|EFM96332.1| hypothetical protein appser10_10540 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306868774|gb|EFN00582.1| hypothetical protein appser12_10510 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 409 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ +I +S V I ++ S +++ + + + F Sbjct: 2 LLLLASLIFG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ + A K+ S ++ +E ++ L++ Sbjct: 61 LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 + A A++ L + G N A A + + Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P A +++++ + + K++K +N IL Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203 >gi|32033977|ref|ZP_00134233.1| COG3071: Uncharacterized enzyme of heme biosynthesis [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 409 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ +I +S V I ++ S +++ + + + F Sbjct: 2 LLLLASLIFG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ + A K+ S ++ +E ++ L++ Sbjct: 61 LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 + A A++ L + G N A A + + Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P A +++++ + + K++K +N IL Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203 >gi|224098648|ref|XP_002189786.1| PREDICTED: O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), partial [Taeniopygia guttata] Length = 1034 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 96 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 153 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 154 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 208 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 209 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 264 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 265 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVEAEECYNTALRLCPTHADSLNNLAN 324 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 325 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 382 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ T ++ +L G++ A R KAL++ P+ Sbjct: 289 ANALKEKGSVVEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 348 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 349 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 404 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 405 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 462 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 463 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 498 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 28/223 (12%) Query: 149 IPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKE 203 P R + L + R GD +A+R+ + PD V + + + Sbjct: 2 EPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLD 61 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 S + L K+ N A ++G + + +L+L + I Sbjct: 62 RSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGY 115 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK- 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 116 INLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKAC 168 Query: 323 --ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 169 YLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 211 >gi|182416089|ref|YP_001821155.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177843303|gb|ACB77555.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 715 Score = 58.0 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 7/205 (3%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G A + +AL I PD P + + AI L + Sbjct: 485 LAMLLTESGRPAEAIPHLEQALRIRPDYPQAMSNLGDDLIRLGRSREAIPHLERALALQP 544 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ +A + +L D+ + +++L MA +L ++ R+A Sbjct: 545 DY--VQAHNNLGTALLTLDRA--AEAIAHFERAVQLDPRYTMAHYNLGLALAQTDRVREA 600 Query: 280 EVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 E++ + P H E++ Y ++ ++ R E+ +SVE+ +++ Sbjct: 601 IPHFERVVTLQPTHAHAELSLAYALASTDRFSESIRHFERALELEPDSVEAHQTYARMLA 660 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361 G +DQA +++ P+ Sbjct: 661 RHGQLDQALPHFRAVVELMPQSGAA 685 >gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514] gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514] Length = 466 Score = 58.0 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 76/268 (28%), Gaps = 33/268 (12%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL ++ A + S V + + + ++ A +++ Sbjct: 201 SRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGS--RGLSYAMKGDWDKAVSDFSELIK 258 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + T S G L+ A ++A+ ++ YV +W +AI Sbjct: 259 LKPTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAI 318 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 ++ + A R KG+ D E+L+L Sbjct: 319 ENFSKSIQLNP----QDADAFAKRGYAYYQKGEYQKGIDDINEALRLNP----------- 363 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVES 327 + AE W P+ + + V K+A L + Sbjct: 364 --------KDAESYNNLAWFRATCPD-----ASMRKGKEAVEAGKKACELTNWKEWHCIG 410 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + E G +QA AM +A Sbjct: 411 TLAAAYA--ETGDFEQAVKYQKQAMGVA 436 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 85/265 (32%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + LA S V + ++ + + E + P R + Sbjct: 41 GDYELAISCWSSVLKLQPTNDAAFFN--RGMAYTQKGDFTSGIHDFDETIRLNPEGRAYD 98 Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 LY + G++ A T+A+ ++P W Y + +AI+ Q Sbjct: 99 NRGNLYDQK---GEVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQAI 155 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + A +R A K D + D + +KL + A + + Sbjct: 156 QINP----KDANYYDSRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGD 211 Query: 276 KRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330 KA L ++ K+N P+ A Y ++ + + + L ++ Sbjct: 212 MDKAIRDLSEVIKLN--PKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLKPTDSIGYDS 269 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIA 355 + G +D+A A A+K+ Sbjct: 270 RATAYQNQGKLDEALADFSEAIKLN 294 >gi|254282077|ref|ZP_04957045.1| TPR domain protein [gamma proteobacterium NOR51-B] gi|219678280|gb|EED34629.1| TPR domain protein [gamma proteobacterium NOR51-B] Length = 405 Score = 58.0 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 96/292 (32%), Gaps = 32/292 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPAT-RE 154 + A ++H + + + L +L + ++ ++ A L ++ R Sbjct: 86 GEVERAIRIHQNLLARPSLPAAQLHLAHLELARDYISAGLFDRAERLLLDLVSESGNHRR 145 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A L D +SA+ A + P + ++ Q + + Sbjct: 146 VAQRHLIEIYEAQSDWDSAREVAE---ALLPK-----KTLLTQPAVEAD----------- 186 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + N A ++ + GD+ A+ ++LK + + AS+ A + Sbjct: 187 -EVGQPVNLILAHFCCEQAESPQEMGDLSAARKLLDQALKYDGDCVRASMMLADIEFRTS 245 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 ++ +L+ + + P + Y+ + + + + Sbjct: 246 NFSRSLKLLKSVQDQDADFVPETVPALRACYSAI--DKRPQFRNYLESCFRARPST-MLV 302 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + +++ + S + A +++ P +L + A+ TD+ L Sbjct: 303 LAIAQELSDTESPESAKQFLRESLREKPTLRGLAMLMSLHDADEAGTDEALE 354 >gi|15668437|ref|NP_247235.1| hypothetical protein MJ_0263 [Methanocaldococcus jannaschii DSM 2661] gi|3915922|sp|O06917|Y263_METJA RecName: Full=TPR repeat-containing protein MJ0263 gi|1499043|gb|AAB98249.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 320 Score = 58.0 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 17/242 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 N A + Q + LV ++ + + A + E + I T ++ Sbjct: 26 GNFDKA--LEYLEKAQKVDKDNPLVLYVKGIVLKLKGDMEKAEKYFECLENIEGTSLLSL 83 Query: 158 YSLYFESCRIGDLNSAQRYATKALDIS-P-DAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +L + G+ +Y K +S P +A++ Y+ E+ +A+ L++ Sbjct: 84 GNLICLTFVKGEYERTLKYIEKLSRLSKPCYLSPFHKALI--YIEFGEFEKALEALDEFL 141 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K +L ++ G + + + L + + A + L Sbjct: 142 KIYPNLTS----ILRQKASILEILGKLDEALDCVNKILSIKKDDAHAWYLKGRILKKLGN 197 Query: 276 KRKAEVILEKIWKVNP---H--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++A L+ +N H +IA Y L + N L + E VE+ Sbjct: 198 IKEALDALKMAINLNENLVHVYKDIA--YLELANNNYEEALNYITKYLEKFPNDVEAKFY 255 Query: 331 VS 332 ++ Sbjct: 256 LA 257 >gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1] gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1] Length = 546 Score = 58.0 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 26/264 (9%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 N Y L Q+ L+E + + A E L+ L I T E A +L R + A+ Sbjct: 147 LSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDIRKTFEAAFVTLGKIYERSERFSEAE 206 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIA 231 + L P+ E + Q Y+ A + + + A+ L+ Sbjct: 207 KLYRSILKEDPNNRSALEKLAQLYMATGRIQEAKELYERLYRIDPTNYQYKHQFAVTLLQ 266 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 G+ + E +L + S A +L KA I EK+ K+ P Sbjct: 267 S-------GEFERAKEILAELYRLHPEDLNVSYSYALALELTGNPEKALEIYEKLHKLVP 319 Query: 292 HPE-----IANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSID 342 + +AN Y L G+ K A L ++N +V+ L++ + + ++ + Sbjct: 320 KNQRIIERLANTYIIL------GRYKEAEELIEKGLQLNPANVKLLMLKANLYIDEKRYE 373 Query: 343 QAHAKAMLAMKIAPRK-EIFLLLA 365 +A A+ +APR+ + L A Sbjct: 374 EAVKVLDRAISLAPREYRAYFLKA 397 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 14/207 (6%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+YS+Y GD A KA P + + +Y+ + A L + Sbjct: 88 IALYSIYRLK---GDRKKAIEVLEKARKKFPKNKEIFIFLADEYIKSGRMKEAKEVLQRF 144 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + +L +G + + +L + A + K Sbjct: 145 AELSPNNPFPYYLL----GQLYLSEGKVDRAIEYLQRALDIRKTFEAAFVTLGKIYERSE 200 Query: 275 KKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + +AE + I K +P+ ++A +Y + + + RL I+ + + Sbjct: 201 RFSEAEKLYRSILKEDPNNRSALEKLAQLY--MATGRIQEAKELYERLYRIDPTNYQYKH 258 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L+ G ++A ++ P Sbjct: 259 QFAVTLLQSGEFERAKEILAELYRLHP 285 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 11/193 (5%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A A + + P+ A+ Y L + +AI L + +K ++ +N+ I + Sbjct: 66 TKKALELAQEYMKRYPNRAEPYIALYSIYRLKGDRKKAIEVLEKARK---KFPKNKEIFI 122 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + E G M + +L N+ + +S+ K +A L++ + Sbjct: 123 F-LADEYIKSGRMKEAKEVLQRFAELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDI 181 Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 E + IY + KL R + + + + +L ++++ + G I +A Sbjct: 182 RKTFEAAFVTLGKIYERSERFSEAEKLYR--SILKEDPNNRSALEKLAQLYMATGRIQEA 239 Query: 345 HAKAMLAMKIAPR 357 +I P Sbjct: 240 KELYERLYRIDPT 252 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 11/140 (7%) Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----I 295 + + A E +K N I + ++KA +LEK K P + + Sbjct: 65 NTKKALELAQEYMKRYPNRAEPYIALYSIYRLKGDRKKAIEVLEKARKKFPKNKEIFIFL 124 Query: 296 ANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A+ Y + L+R E++ + ++ ++ L G +D+A A+ I Sbjct: 125 ADEYIKSGRMKEAKEVLQRF---AELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDI 181 Query: 355 APR-KEIFLLLAQI-EQANS 372 + F+ L +I E++ Sbjct: 182 RKTFEAAFVTLGKIYERSER 201 >gi|119485063|ref|ZP_01619448.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119457291|gb|EAW38416.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 612 Score = 58.0 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 82/231 (35%), Gaps = 28/231 (12%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNR 223 G A++Y KA++I PD + Y K W +AI + K NA + R Sbjct: 58 QGQEEEAKQYYLKAVEIQPDLAESYANLGSIYTKQKNWQKAIETYKKVVKIQPNAATYYR 117 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEV 281 N A +L + ++LKL + + L+ K A Sbjct: 118 NIAQILTQL-------NQQEEATQYWYQALKLEPDWATPEEHLTLGNMLLKFEKPLPAIT 170 Query: 282 ILEKIWKVNP------HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKI 334 ++ K+ P H + ++ L + + K+AL L N S + ++ Sbjct: 171 CYQRTIKLKPASFEAAH-NLGEAFSQLERWQEAIENYKKALEL---NPSSAVTYQRLADT 226 Query: 335 ALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHNTDKILY 380 + + S D A ++++ P ++I LL Q EQ + Sbjct: 227 FMRLKSWDVALENYKKSLELDPNSFQVYQKIAQLLLQQEQYEPAIQAYLRA 277 >gi|213410593|ref|XP_002176066.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces japonicus yFS275] gi|212004113|gb|EEB09773.1| mitochondrial TOM complex subunit Tom70 [Schizosaccharomyces japonicus yFS275] Length = 638 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 11/203 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q+ + A + ++ T + L + ++ A + + P Sbjct: 433 RAQVHFISGDFAKAIKDYRKSNELDDTFIYGYIQLAVAQYKSNEVEEAVKTFEMCKERFP 492 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENA-DKGD 241 D+ V + + +++ A+ ++ K N A+ LI ++L K D Sbjct: 493 DSGEVYNYYGEILLDQQKFDEALDHFDRAIELGKKKSAQNVMNAMPLINKALTVFQAKRD 552 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + + ++L +A A+ L+ Q K +A EK ++A + Sbjct: 553 VDQAEKLCQQALDADPECDIAVASMAQFLLQQGKPVEALKYFEKS------ADLARTESE 606 Query: 302 LLSENTVGKLKRAL-RLEEINKE 323 +++ + + R L + E Sbjct: 607 MVNAFSYSEATRTQIALTDRYPE 629 >gi|319790334|ref|YP_004151967.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] gi|317114836|gb|ADU97326.1| Tetratricopeptide TPR_1 repeat-containing protein [Thermovibrio ammonificans HB-1] Length = 265 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 58/166 (34%), Gaps = 9/166 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL A+ KAL + P+ + Y A + N Sbjct: 90 LKRGDLKRARENLQKALRLKPNFSEAWLNLGMLYEEEGNLKEARRCYEKALSNPLYLTPE 149 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-- 282 A + +L + +G++ + + +++ + + A + AK + +A+ + Sbjct: 150 VAYYHL--ALLDEKEGNLKGAKRNLALAIRNNPDYVPAYVEFAKIFEKEGDYGRAQDLYF 207 Query: 283 -LEKIWKVNPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESV 325 L ++ +P + +Y + + +K + +N + Sbjct: 208 RLINLYPNLQYPYCALGKLYLKVGDRDNG--VKFLRKCVNVNPTTP 251 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 70/215 (32%), Gaps = 13/215 (6%) Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + Y + +G++ A Y KA + P+ P + A+ ++ + RA Sbjct: 41 PKEKAQGYYQIAVAYLNLGEIPLALNYLYKAKKLEPNDPKIYNALGLAFLKRGDLKRARE 100 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--ASICAA 267 L + + ++ + + ++G++ + ++L A A Sbjct: 101 NLQKALRLKPNFSE----AWLNLGMLYEEEGNLKEARRCYEKALSNPLYLTPEVAYYHLA 156 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRAL-RLEEINK 322 + + A+ L + N P+ Y E G+ + RL + Sbjct: 157 LLDEKEGNLKGAKRNLALAIRNN--PDYVPAYVEFAKIFEKEGDYGRAQDLYFRLINLYP 214 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + K+ L++G D + + P Sbjct: 215 NLQYPYCALGKLYLKVGDRDNGVKFLRKCVNVNPT 249 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 62/221 (28%), Gaps = 40/221 (18%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y AL GL + ++ AR+ + +E + L + E A E Sbjct: 82 YNAL--GLAFLKRGDLKRARENLQKALRLKPNFSEAWLNL--GMLYEEEGNLKEARRCYE 137 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L P LY ++P+ + A++ + Sbjct: 138 KALSNP---------LY---------------------LTPEVAYYHLALLDEK--EGNL 165 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A L +N ++ + + +GD + + L N Sbjct: 166 KGAKRNLALAIRNNPDY----VPAYVEFAKIFEKEGDYGRAQDLYFRLINLYPNLQYPYC 221 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 K + + L K VNP +A T LL E Sbjct: 222 ALGKLYLKVGDRDNGVKFLRKCVNVNPTTPLAADATRLLEE 262 >gi|120600515|ref|YP_965089.1| HemY domain-containing protein [Shewanella sp. W3-18-1] gi|146294673|ref|YP_001185097.1| HemY domain-containing protein [Shewanella putrefaciens CN-32] gi|120560608|gb|ABM26535.1| HemY domain protein [Shewanella sp. W3-18-1] gi|145566363|gb|ABP77298.1| HemY domain protein [Shewanella putrefaciens CN-32] Length = 388 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 128/384 (33%), Gaps = 32/384 (8%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAW-ILLFAVSRFFLSC-PAMLFHMLH 77 + V IT G+ TS + L F + +L + V + Sbjct: 20 WLVGNTGYVYITAGDYQIETSLVFGVIALIVFYAVFQVLEWLVITAINLILRSRFIPYHW 79 Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIAL--AER 134 +R K + + G +++A + P A R M L Q AER Sbjct: 80 RRRSAKKHTLM--GALALAEEDWPAAERAMIKGADNGELPALNLLAAARAAQYQQKIAER 137 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + + + T A Y L + G+L A+ K S V + Sbjct: 138 DQYLDRAASQPLAANAVTTTRARYLL-----KQGELALARVELDKLSPTSKSKAPVLKLA 192 Query: 195 VQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI------- 243 + Y ++W ++ + +++N + A A K + Sbjct: 193 LDLYQAQQDWDALKLLLPILKKRQLIDDEKFNELNIVTHCALLKAAATKSEAALEECWQW 252 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 S + +S L A +L N+K +A +L K + P + + + Sbjct: 253 LSRSERNQSEYLA--------IYAIALCRFNRKDEAMKLLLKKLRSAPDTALLKVIPDIT 304 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + K+ L+ E ++ + + + ++K+ + + +A ++ P K+ +L Sbjct: 305 TAQDMDIRKQLLKYEVTHENNADYQICLAKLYQQTREMKEAKTCWQNVCRLEPTKDAWLA 364 Query: 364 LAQIEQANSHNTDKILYWTQSALH 387 LA+I++ + A + Sbjct: 365 LARIQE-QLGEQGYANQSYRQAAN 387 >gi|149048929|gb|EDM01383.1| rCG29705 [Rattus norvegicus] Length = 519 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L A +++ PD Sbjct: 163 LTKDMAEAKMYYQRALQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAY 222 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L ++ D G + + Sbjct: 223 SSLASLLAEQERFKEAEDVYQAGIKNCPDSSD----LHNNYAVFLVDSGFPEKAVAHYQQ 278 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 +++L + +A + + S + R+A + ++P + +Y + + Sbjct: 279 AIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAEVLSP---LGALYYN--T 333 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 L+ + + + ++++ MG +A + PR E + L Sbjct: 334 GRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRL 393 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H +K L + AL DP Sbjct: 394 LSAIYSKQEH-HEKALEAIEKALQLKPKDP 422 >gi|320539403|ref|ZP_08039072.1| putative protoheme IX synthesis protein [Serratia symbiotica str. Tucson] gi|320030528|gb|EFW12538.1| putative protoheme IX synthesis protein [Serratia symbiotica str. Tucson] Length = 348 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 3/192 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS ++ ++ + + + V R A R Sbjct: 21 LAGHQGYVLIQTDNYNIETSVTGLVIMVLLLVVMLMAIEWVLRHIFRTGARTRGWFIGRK 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + L+ +A + + + + + YLL + A + Sbjct: 81 RSRARAQTNAALIKLAEGDYKQVESLLTRNADHA--EQPMVNYLLAAEAAQQRGDDFRTN 138 Query: 141 EKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + LE ++ T + V + G+ ++A+ + L+ +P P V Q Y+ Sbjct: 139 QYLERAAEVADTDQLPVDITRVRIQLAQGEDHAARHGVDRLLNQAPRHPEVLRLAEQAYL 198 Query: 200 LAKEWSRAITFL 211 ++ + L Sbjct: 199 RTGAYNSLLEIL 210 >gi|302343326|ref|YP_003807855.1| hypothetical protein Deba_1896 [Desulfarculus baarsii DSM 2075] gi|301639939|gb|ADK85261.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM 2075] Length = 583 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 104/313 (33%), Gaps = 53/313 (16%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCR 166 + V + + L Q+AL N A E L + P + L+ E R Sbjct: 35 AKVDAPVSSLTDSLALYGAAQMALENGDTNKALELLRQGIKIDPKSAF-----LHIEVSR 89 Query: 167 I----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 I G + A++ A +A++++P+ + Y ++ + A+ + + Sbjct: 90 ILLGVGRTDEAEKEARQAIELNPELVDGWLLLGGIYSSRQDLNNAVKAFERATTLDPDQE 149 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R L D+G M + + +KL +A ++L S + R+AEV Sbjct: 150 EARLYLGTLY----MDQGRMEQAVQVLRDLVKLRPRLALARYYLGQALASLRRYRQAEVQ 205 Query: 283 LEKIWKVNPH-----PEIANIY----------------THLLSENTV--GKLKRA----- 314 L+ + P+ E+ +Y L ++T +L R Sbjct: 206 LKAALLIAPNFEAVLFELGAVYEMQHKYRDAEATYLRVLDLNPDSTAGHDRLGRFYLSTG 265 Query: 315 ---LRLEEINK------ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLL 363 L E + E + + + E G +QA + K P + + L Sbjct: 266 RYQEALREFAVVKGLSRDDSEVRLKIGLVYYEQGKYNQAAEEFRAIAKDEPDNHRARYYL 325 Query: 364 LAQIEQANSHNTD 376 ++ + Sbjct: 326 GVSLQDGGKGDQA 338 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 18/182 (9%) Query: 197 QYVLAKEWSRAITFLNQ-----------KKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 A W A+ L K +A + ++ L + + GD + Sbjct: 7 FKRAAALWGLALMLLTAGCATVTPQAPPAKVDAPVSSLTDSLALYGAAQMALENGDTNKA 66 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS- 304 + +K+ S I ++ L+ + +AE + ++N PE+ + + L Sbjct: 67 LELLRQGIKIDPKSAFLHIEVSRILLGVGRTDEAEKEARQAIELN--PELVDGWLLLGGI 124 Query: 305 ----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 ++ +K R ++ + E+ + + + ++ G ++QA +K+ PR + Sbjct: 125 YSSRQDLNNAVKAFERATTLDPDQEEARLYLGTLYMDQGRMEQAVQVLRDLVKLRPRLAL 184 Query: 361 FL 362 Sbjct: 185 AR 186 >gi|256822126|ref|YP_003146089.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069] gi|256795665|gb|ACV26321.1| TPR repeat-containing protein [Kangiella koreensis DSM 16069] Length = 391 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 72/177 (40%), Gaps = 11/177 (6%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+Y L + +G + A T+ L+ Sbjct: 86 GEVDRAIRLHQNLIARPQLSSDDRNTALYQLGLDYNAVGMYDRAVSLFTELLEDPEHKSE 145 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y L K+W +A Q + + +E ++ A + + +GD+ A+ + Sbjct: 146 SLHQLLNIYQLTKDWDQAAKVAEQLQSSMGEEQSKPLAHFYCELADQKRSEGDIKAALAN 205 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK--IWKVNPHPEIANIY 299 + L + +S+ ASI + Q ++A + IL++ + P+IA Y Sbjct: 206 LKKGLSINPDSVRASILQGDIYLQQKSFKQAIKSYQRILKQDIAFLPEALPKIAEAY 262 >gi|217970045|ref|YP_002355279.1| PEP-CTERM system TPR-repeat lipoprotein [Thauera sp. MZ1T] gi|217507372|gb|ACK54383.1| PEP-CTERM system TPR-repeat lipoprotein [Thauera sp. MZ1T] Length = 924 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 98/306 (32%), Gaps = 18/306 (5%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT- 152 ++ A + + E L L + + P T Sbjct: 74 ALQLGEADKAERDARKAIEYGFSRTEALPLLARAILMQQAPDRVLTELS-TAPTDAPDTM 132 Query: 153 --REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 ++ G+L++A+ KA + P P + L K++ A Sbjct: 133 QAEYASLRGTAL--LLKGELDAAEPEFGKAHKLDPALPEAIVGLALAQSLRKQYDEARKT 190 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIMASICAAKS 269 L + ++L + + + + A ++++ + + A + Sbjct: 191 LAPALERTPPVADAWSLL-----GDIETEQERFDAAETAFGQAIRARAHVTLERAKRALA 245 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK----RALRLEEINKESV 325 + Q K +AE L + ++ HP Y LS +L+ + Sbjct: 246 RVRQGKFAEAEADLNALGALSRHP--YAQYVTGLSHFRQQRLREAADAFELSLAADPNFA 303 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + V ++ L +G +QA A A AP+ LL I QA + + ++A Sbjct: 304 PNRVYLAITRLMLGQQEQALAHAEFIRAAAPQASGANLLLGIAQAGHADYGQARKTLEAA 363 Query: 386 LHAMPD 391 L + PD Sbjct: 364 LASEPD 369 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 34/294 (11%), Positives = 82/294 (27%), Gaps = 18/294 (6%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + L ++A + + ++ + +++ A Sbjct: 230 RARAHVTLERAKRALARVRQGKFAEAEADLNALGALSRHPYAQYVTGLSHFRQQRLREAA 289 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + E+ L L +G A +A +P A + Sbjct: 290 DAFELSLAADPNFAPNRVYLAITRLMLGQQEQALAHAEFIRAAAPQASGANLLLGIAQAG 349 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 ++ +A L + + L + + +GD + A L +S Sbjct: 350 HADYGQARKTLEAALASEPD----NVTNLQLLATLSLLQGDSKTALSHAQRLATLRPDST 405 Query: 261 MAS--ICAAKSLISQNKKRKAE---VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 A + A+ + L+ + + KRA Sbjct: 406 GAINLLMMAQLMSGAEVPEPTAGQVDALQAEFMQA-----LEAFRDKRFGEAT---KRAE 457 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIE 368 L + E + + +++ + L G +A + ++ P + LA++E Sbjct: 458 ALRAAHPEQIGPINLLAALYLSTGQWPKARKELETVLQRQPADATARINLAKLE 511 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 25/283 (8%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y A+ + + LA + LL Y A + LE Sbjct: 308 YLAITRLM--LGQQEQALAHAEFIRAAA----PQASGANLLLGIAQAGHADYGQARKTLE 361 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L + L S GD +A +A + + PD+ ++ +++ Sbjct: 362 AALASEPDNVTNLQLLATLSLLQGDSKTALSHAQRLATLRPDSTGAINLLMMAQLMSG-- 419 Query: 205 SRAITFLNQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLC--DNSIM 261 + + A+ ++LE + A E+L+ + Sbjct: 420 ---------AEVPEPTAGQVDALQAEFMQALEAFRDKRFGEATKRA-EALRAAHPEQIGP 469 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLK-RALRLE 318 ++ AA +S + KA LE + + P A I L + ++K L Sbjct: 470 INLLAA-LYLSTGQWPKARKELETVLQRQPADATARINLAKLELQDRNFQRIKELVSPLV 528 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + + +++ + + A +K P + Sbjct: 529 LASPSAEAPALLLVAAEHGLQNDVAADQVLEQLVKSNPSATLA 571 >gi|161501869|ref|YP_052459.2| cellulose synthase subunit BcsC [Pectobacterium atrosepticum SCRI1043] Length = 1189 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 109/315 (34%), Gaps = 40/315 (12%) Query: 91 GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYL-------VYLLEVQIALAERQYNI 138 GL+ + A + A + + + V++ ++ E L + E AL + Sbjct: 344 GLVYLRAGDRVKALAQFQKALQADVNRLNSGKWEGLIQSTQYWTTITEGDNALKANNLPL 403 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + Q+ T +A+ L + + +AQ +AL + P +V Y Sbjct: 404 ARQKYQQARQMDNTNAYALIGLGDVAVASKNDAAAQPLYQQALQLEPGNDNALRGLVGIY 463 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----ARSLENADKGDMIASYHDAIESL 253 +A+ +LN ++ + R LL ++ + ++ + + Sbjct: 464 QRQSP-EKALAYLNSLPRSQQNTMRETLALLQLDILKQQADQLLEQQQWALAEEKYRQVN 522 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENT 307 + N I + A+ L + K + A+ ++++ P P A +Y + + Sbjct: 523 QQDPNDIWFAYRYAQVLRQRGKPQLADSVVQRA-TAVP-PASAEKNYVYSLYLSSTNRDE 580 Query: 308 VGKLKRALRL--EEINKE--------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L L + N + + ++ + ++ + G A A Sbjct: 581 QA-LAHLNTLPAAQWNDDMRDLSKRLTSQTTLAKAEAMRDAGDEIAAMAFLRQQPTDT-- 637 Query: 358 KEIFLLLAQIEQANS 372 I LLLA A Sbjct: 638 -RIDLLLADWALAQG 651 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 35/134 (26%), Gaps = 6/134 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + A L L + G+ +A + Sbjct: 609 TTLAKAEAMRDAGDEIAAMAFLRQQPTDTRIDLL----LADWALAQGEYTTALAEYQRIR 664 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240 P P + ++ + A LN+ + N R + +++ N K Sbjct: 665 TREPQNPDAQLGEIDAFIAQGQQDEARQRLNKLPVQAVDTLNGQRRVANAWQAVGNPQKS 724 Query: 241 DMIASYHDAIESLK 254 I++ K Sbjct: 725 -TALFRQLKIDAQK 737 >gi|298705024|emb|CBJ28499.1| conserved unknown protein [Ectocarpus siliculosus] Length = 827 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 96/285 (33%), Gaps = 13/285 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 +++L+ + + A L E L P + + + ++ E A+ Sbjct: 477 PRAEMLWLMAAKEKWLSNDVDGARTILKEAFLANPDSEQVWLAAVKLE-WENNAFERARI 535 Query: 176 YATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KA D +P W+ A++++ + A E A+ ++ + + + + ++A L Sbjct: 536 LLKKACDRAPTALVWMKAALLERELKAPE--AALKLIDTALPSYPTFAK---LYMMAGQL 590 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + + L+ C SI AA+ KA +LE NP E Sbjct: 591 CSEELNLPERAREYYQRGLRACPGSIPLWRLAARLEERTVGVNKARPMLEVARLRNPKSE 650 Query: 295 IANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + E G K A L +E S V+ ++ L +Q + Sbjct: 651 -GLWLEAVRLERRAGNNKGADSLMAKALQECPGSGVLWAEEILVAQRAEQKSKSLEALKR 709 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP--DPLWIS 396 + +A+ A+ K W A+ P W + Sbjct: 710 CDNDPHVITAVARRFWADRK-YAKARKWFNRAITLDPNMGDAWAA 753 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 71/211 (33%), Gaps = 18/211 (8%) Query: 200 LAKEW-SRAITFLNQKKKNAKEWNRNRAILLI-------ARSLENADKGDMIASYHDAIE 251 + W A LN+ A+ R+ K S ++ Sbjct: 411 RKRTWMDDAENSLNRGGVETARAIYAHALGHFRSKKGVWMRACALEKKHGTAESLEQMLK 470 Query: 252 -SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVG 309 ++ C + M + AAK N A IL++ + N P+ ++ + E Sbjct: 471 KAVTHCPRAEMLWLMAAKEKWLSNDVDGARTILKEAFLAN--PDSEQVWLAAVKLEWENN 528 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML---AMKIAPRKEIFLLLA- 365 +RA L + + + ++ K AL + A L A+ P ++A Sbjct: 529 AFERARILLKKACDRAPTALVWMKAALLERELKAPEAALKLIDTALPSYPTFAKLYMMAG 588 Query: 366 QIEQANSHNTDKILYWTQSALHAMPD--PLW 394 Q+ + ++ + Q L A P PLW Sbjct: 589 QLCSEELNLPERAREYYQRGLRACPGSIPLW 619 >gi|297809787|ref|XP_002872777.1| hypothetical protein ARALYDRAFT_490219 [Arabidopsis lyrata subsp. lyrata] gi|297318614|gb|EFH49036.1| hypothetical protein ARALYDRAFT_490219 [Arabidopsis lyrata subsp. lyrata] Length = 1004 Score = 57.6 bits (138), Expect = 4e-06, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 95/299 (31%), Gaps = 41/299 (13%) Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + + E L+ +L+ P + E GD+ +A+ +A Sbjct: 640 AAQLE-KSHGSRESLDALLRKAVTYVPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 697 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--- 240 P++ + A + KE RA L + ++ ++ R L N ++ Sbjct: 698 IPNSEEIWLAAFKLEFENKEPERARMLLAKARERGGTERVWMKSAIVERELGNVEEERRL 757 Query: 241 --------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + LK C + I + A N Sbjct: 758 LNEGLKQFPTFFKLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVN 817 Query: 275 KKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332 KA IL K N P A ++ + +E + A L +E S ++ + Sbjct: 818 GLNKARAILTTARKKN--PGGAELWLAAIRAELRHDNKREAEHLMSKALQECPSSGILWA 875 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +EM + K+M AMK R + +K W + A+ PD Sbjct: 876 -ADIEMAPRPRRKTKSMDAMKKCDRDPHVTVAVAKLFWQDKKVEKARSWFERAVTLGPD 933 >gi|270262102|ref|ZP_06190374.1| hypothetical protein SOD_b03090 [Serratia odorifera 4Rx13] gi|270043978|gb|EFA17070.1| hypothetical protein SOD_b03090 [Serratia odorifera 4Rx13] Length = 389 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 31/259 (11%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R AV L + G + A+ + IS Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGMYDRAEDMFGQLVGEEDFRIS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W +AI + K K+ R A +L+ D+ Sbjct: 143 -----ALQQLLVIHQATSDWLKAIDVAEKLVKLGKDKQRIEIAHFYCELALQAMGSDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIAN 297 + + SI + ++Q + KA L+ K P + Sbjct: 198 KAMSLLKRAASADKQCARVSIMVGRIYMAQAEYAKAVESLQRVLNQDKELVSETLPMLHE 257 Query: 298 IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y HL + ++ LKR E N + + +++++I + D ++ P Sbjct: 258 CYQHLENQQDWAEFLKRC---VEENTGAT-AELMLAEIIEQHEGRDVVQVYINRQLQRHP 313 Query: 357 RKEI-FLLL----AQIEQA 370 + + L+ A E Sbjct: 314 TMRVFYRLMDYHLADAEDG 332 >gi|262362142|gb|ACY58863.1| hypothetical protein YPD4_1956 [Yersinia pestis D106004] Length = 385 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 83/253 (32%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLIIHQATSDWHNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361 R E N + + ++++++ + D A ++ P + Sbjct: 263 QQPQAWANF--LKRCVEDNTGAA-AELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|332288803|ref|YP_004419655.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179] gi|330431699|gb|AEC16758.1| tetratricopeptide repeat protein [Gallibacterium anatis UMN179] Length = 390 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 89/279 (31%), Gaps = 61/279 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151 + A ++H + + E LL Q + + A + + + + P Sbjct: 91 GEVDRALRIHQNIDNNPNYSYEQ--KLLTRQ--QLAKDFMFVGFLDRAEKLYQKLSEEPD 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 YA AL + Y KEW +AI Sbjct: 147 ------------------------YAENAL----------HELANIYQRTKEWDKAIEVG 172 Query: 212 NQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + +K + N + +LE+ + ++AS ++L + N + A++ A+ Sbjct: 173 ERYRKLTQQTENIALSHYYCEFALESDQQQQIMASLT---KALIVSPNCVRATLILAEQY 229 Query: 271 ISQNKKRKAEVILEK------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 QN +A LE+ + P + Y HL + + + ++L++ Sbjct: 230 AKQNNYEQAIKTLEQIVEQNLAYISEALPPLIEYYHHLPNSHDLELF--LIKLQQQKVN- 286 Query: 325 VESLVIVSKIALEMGSIDQ--AHAKAMLAMKIAPRKEIF 361 S V+++ A ++ P IF Sbjct: 287 --SAVVIALTDYIEQKSGAEVAKNHLYRQLEKRPTMRIF 323 >gi|212212959|ref|YP_002303895.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuG_Q212] gi|212011369|gb|ACJ18750.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuG_Q212] Length = 561 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 74/229 (32%), Gaps = 11/229 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A E +L+ + A++ ++G + A Y +AL + P Sbjct: 15 QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQN 74 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A +Q + + A + + + ++ Sbjct: 75 SRGNILSQHGKLVEATIAYDQAIQLQPD----HATAYNNIANCFFRQKKFDNAKKAYQKA 130 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307 + L + A A+ LI +A L++ ++ H ++A++Y +L + Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYL--GDF 188 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + E+ ++ L+ +A A+ + P Sbjct: 189 SKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNP 237 >gi|294667607|ref|ZP_06732821.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602602|gb|EFF46039.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 690 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 71/221 (32%), Gaps = 8/221 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + + +PD + + + A+ ++ A E Sbjct: 6 LQALRRNAADDAVALAREWVANAPDHAAAHRWLALALQQQGQPALALDSIDTALTLAPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ S L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + L R E + L + L+ Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378 A +++ P +AQ+ Q D + Sbjct: 182 EHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDAV 222 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 16/292 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + S + + ++LL LA R + A L + + A Sbjct: 46 GQPALALDSIDTALTLAPEDADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVM 105 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + GDL+ A+R + A ++P+ P + VV+ + RA++ L + + Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMR--RGQDDRALSLLTRAAEQ 163 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A +L + K + ++L A+ Q + Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLD 219 Query: 278 KAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A ++ + P ++ + L + +L + Sbjct: 220 DAVAAMQGV-LDQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALL 278 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 +G++D A A+ + L LA I W Sbjct: 279 TAWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330 >gi|22125957|ref|NP_669380.1| tetratricopeptide repeat protein [Yersinia pestis KIM 10] gi|45441824|ref|NP_993363.1| tetratricopeptide repeat protein [Yersinia pestis biovar Microtus str. 91001] gi|108807580|ref|YP_651496.1| tetratricopeptide repeat protein [Yersinia pestis Antiqua] gi|108811856|ref|YP_647623.1| tetratricopeptide repeat protein [Yersinia pestis Nepal516] gi|145598206|ref|YP_001162282.1| tetratricopeptide repeat protein [Yersinia pestis Pestoides F] gi|149365855|ref|ZP_01887890.1| hypothetical protein YPE_1033 [Yersinia pestis CA88-4125] gi|162419005|ref|YP_001606679.1| tetratricopeptide repeat protein [Yersinia pestis Angola] gi|165927444|ref|ZP_02223276.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165938149|ref|ZP_02226708.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010616|ref|ZP_02231514.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166210731|ref|ZP_02236766.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167400789|ref|ZP_02306295.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420312|ref|ZP_02312065.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424915|ref|ZP_02316668.1| tetratricopeptide repeat protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467727|ref|ZP_02332431.1| tetratricopeptide repeat protein [Yersinia pestis FV-1] gi|218929322|ref|YP_002347197.1| tetratricopeptide repeat protein [Yersinia pestis CO92] gi|229894911|ref|ZP_04510089.1| conserved protein [Yersinia pestis Pestoides A] gi|229897654|ref|ZP_04512810.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898299|ref|ZP_04513446.1| conserved protein [Yersinia pestis biovar Orientalis str. India 195] gi|229902158|ref|ZP_04517279.1| conserved protein [Yersinia pestis Nepal516] gi|270490630|ref|ZP_06207704.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27] gi|294503738|ref|YP_003567800.1| hypothetical protein YPZ3_1628 [Yersinia pestis Z176003] gi|21958899|gb|AAM85631.1|AE013809_5 putative heat shock protein [Yersinia pestis KIM 10] gi|45436686|gb|AAS62240.1| Predicted N-acetylglucosaminyl transferase [Yersinia pestis biovar Microtus str. 91001] gi|108775504|gb|ABG18023.1| hypothetical protein YPN_1694 [Yersinia pestis Nepal516] gi|108779493|gb|ABG13551.1| hypothetical protein YPA_1585 [Yersinia pestis Antiqua] gi|115347933|emb|CAL20855.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145209902|gb|ABP39309.1| hypothetical protein YPDSF_0909 [Yersinia pestis Pestoides F] gi|149292268|gb|EDM42342.1| hypothetical protein YPE_1033 [Yersinia pestis CA88-4125] gi|162351820|gb|ABX85768.1| tetratricopeptide repeat protein [Yersinia pestis Angola] gi|165913810|gb|EDR32428.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis str. IP275] gi|165920710|gb|EDR37958.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990318|gb|EDR42619.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166207911|gb|EDR52391.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166962007|gb|EDR58028.1| tetratricopeptide repeat protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049642|gb|EDR61050.1| tetratricopeptide repeat protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056102|gb|EDR65880.1| tetratricopeptide repeat protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681054|gb|EEO77149.1| conserved protein [Yersinia pestis Nepal516] gi|229688589|gb|EEO80658.1| conserved protein [Yersinia pestis biovar Orientalis str. India 195] gi|229693991|gb|EEO84040.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702006|gb|EEO90027.1| conserved protein [Yersinia pestis Pestoides A] gi|262365474|gb|ACY62031.1| hypothetical protein YPD8_1346 [Yersinia pestis D182038] gi|270339134|gb|EFA49911.1| tetratricopeptide repeat protein [Yersinia pestis KIM D27] gi|294354197|gb|ADE64538.1| hypothetical protein YPZ3_1628 [Yersinia pestis Z176003] gi|320014892|gb|ADV98463.1| conserved protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 389 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 83/253 (32%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLIIHQATSDWHNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361 R E N + + ++++++ + D A ++ P + Sbjct: 263 QQPQAWANF--LKRCVEDNTGAA-AELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|94266075|ref|ZP_01289793.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93453358|gb|EAT03789.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 585 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 68/233 (29%), Gaps = 10/233 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + ++ + A Q +A + L+ + +L A + + + Sbjct: 60 HFIQAERAKLAGQLELARQAYRQALRCDPLALPVMRNLAMLLLASEQRQEAIEWLQRMAE 119 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P + + Y A + +A + +L + + + + Sbjct: 120 LRPGETEIHSLLANLYAAAGQPDKAAAIYRKILAAEPGNANVTLLLATLYARQERRQDAL 179 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPEIANI 298 + + ++ MA A+ + A E+ W E A Sbjct: 180 VMLENLVLQQ----PEMAMAHFYLARLHREMDDLPAALAAYERALALQWSAAMAREAAET 235 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 Y +L R ++ N + +++ I L + +D+A + Sbjct: 236 YEMAGRYEDSLRLYR--QVVAANPADERARGLLANIYLRLERVDEALDELAEL 286 >gi|24215272|ref|NP_712753.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|45657285|ref|YP_001371.1| hypothetical protein LIC11408 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196364|gb|AAN49771.1|AE011424_9 TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|45600523|gb|AAS70008.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 369 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 5/158 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y+ A + ++ FA+Y L D + A +Y + L+ PD + Sbjct: 202 KDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHKANQYWERILEFDPDNKLIINR 261 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 E+ +A+ N+ +++ L+ ++ G + ++ Sbjct: 262 YADSLRGMGEFDKALECFNKILAEGEDY-----FALLGKASSLKLIGKKDKAEEIYLDLH 316 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 K + + + K +A +LE K P Sbjct: 317 KKFPMDPRPLLELSDLHVEMGKPTEAIRLLEDFQKKQP 354 >gi|330445638|ref|ZP_08309290.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489829|dbj|GAA03787.1| tetratricopeptide repeat family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 389 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 48/287 (16%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T L + + + A + +L+ P + Sbjct: 83 GEVDRAIRIHQNLIARPNLTIEQRNLALQQLAKDYMVAGFLDRAERIFQQLLEEPEYK-- 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 P + ++ Y +EW AI +Q Sbjct: 141 ----------------------------KPAL----QQLLSIYQQTREWEEAIDVASQLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K K ++ A ++ + + ++L + ASI AK LI + Sbjct: 169 KLGKTKLKHDIAHYWCELAMIEMGAQNQDKALQCLKKALSTDKQCVRASITMAKILIKEK 228 Query: 275 KKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + ++A LE + P + Y L +E+ G LK + E + L Sbjct: 229 EFKQAAKTLERVLEQDAEFIGEALPLLLECYEALHNES--GWLKYLQQCVEAKAGASAEL 286 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLA-QIEQANSH 373 ++ +IA G++ A + ++ P + L+ +++A Sbjct: 287 MLADEIAKNEGAVS-AQSFMTRQLQKNPTMKGFYQLMEYHLDEAEEG 332 >gi|66793439|ref|NP_001019747.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Xenopus (Silurana) tropicalis] gi|60618530|gb|AAH90599.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Xenopus (Silurana) tropicalis] Length = 1035 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 101/300 (33%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 154 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 155 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 209 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 210 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 265 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + AE ++ P H + N + Sbjct: 266 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPTHADSLNNLAN 325 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 326 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 383 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 105/353 (29%), Gaps = 77/353 (21%) Query: 84 GYKALYTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A TGL +A A + A + H + N ++ LL R Sbjct: 6 GSVADSTGLAELAHREYQAGDFEAAER-HCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRS 64 Query: 139 AHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWV 190 AH + Q P L E+ G L A + AL + PD Sbjct: 65 AHFSTLAIKQNP---------LLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 115 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMI------ 243 + V A + A+ + + + + + ++L ++ Sbjct: 116 YINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIE 175 Query: 244 -----------------------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + H +++ L N + + I+ K Sbjct: 176 TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL-------DAYINLGNVLKEA 228 Query: 281 VILEKIWKV-------NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVES 327 I ++ +P H +A +Y L + + +RA+ L ++ Sbjct: 229 RIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL---QPHFPDA 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ E GS+ A A+++ P + LA I++ + + + Sbjct: 286 YCNLANALKEKGSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 338 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ T ++ +L G++ A R KAL++ P+ Sbjct: 290 ANALKEKGSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 349 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 350 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 405 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 406 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 463 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 464 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 499 >gi|29653887|ref|NP_819579.1| TPR domain-containing protein [Coxiella burnetii RSA 493] gi|161831595|ref|YP_001596478.1| TPR repeat-containing methyltransferase [Coxiella burnetii RSA 331] gi|29541150|gb|AAO90093.1| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493] gi|161763462|gb|ABX79104.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii RSA 331] Length = 561 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 74/229 (32%), Gaps = 11/229 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A E +L+ + A++ ++G + A Y +AL + P Sbjct: 15 QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLGRNDEALHYIDRALLLEPQNATFQN 74 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A +Q + + A + + + ++ Sbjct: 75 SRGNILSQHGKLVEATIAYDQAIQLQPD----HATAYNNIANCFFRQKKFDNAKKAYQKA 130 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307 + L + A A+ LI +A L++ ++ H ++A++Y +L + Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYL--GDF 188 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + E+ ++ L+ +A A+ + P Sbjct: 189 SKAITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNP 237 >gi|218783089|ref|YP_002434407.1| hypothetical protein Dalk_5269 [Desulfatibacillum alkenivorans AK-01] gi|218764473|gb|ACL06939.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 816 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 88/264 (33%), Gaps = 13/264 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 N AR+ S L+ + + AE A + L++ + Sbjct: 541 GNPEKARERLSIALALD--PENALIQTVMANVLSAEGDLEEARVHYQKALELEPDQSQIH 598 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+ ++G+++ A+ AL+ P+ P + + A+T ++ Sbjct: 599 YAYGNLLSKLGEVDQAEEQHRAALENDPEDPRFHANMANTLSRQGRYGEAMTHYHKAL-- 656 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E A++ + AD+G + + ++K + A L Q + + Sbjct: 657 --ELEPGNAMIHTNMGIALADQGKVDEAASHFKAAMKSQPDFAPAYYNMGYVLAKQGRHQ 714 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTV-----GKLKRALRLEEINKESVESLVIVS 332 +A K ++ P+ Y + ++ + E ++ + L + Sbjct: 715 EALEYFSKAVEIK--PDYGQAYYEAGNSLAHTGHLNEAVQSYKKALEQEPDNPKILHNLG 772 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + + G ++ A A+ + P Sbjct: 773 IVYAQGGELETAVDYFEKALALQP 796 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 100/307 (32%), Gaps = 22/307 (7%) Query: 98 HNIPLARKMHSYV------SQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 N +A++M++ + + + L L Q++L + A + L+ Sbjct: 432 GNAYMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSL--GLLDEATANVREALKTD 489 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A Y+L + L+ A Y A+ + PD P + +A Sbjct: 490 PNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMAQCNLGYLLYKMGNPEKARER 549 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L+ E A++ + + +GD+ + ++L+L + L Sbjct: 550 LSIALALDPE----NALIQTVMANVLSAEGDLEEARVHYQKALELEPDQSQIHYAYGNLL 605 Query: 271 ISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + +AE + +P H +AN + + + E+ + Sbjct: 606 SKLGEVDQAEEQHRAALENDPEDPRFHANMANTLS--RQGRYGEAMTHYHKALELEPGNA 663 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQS 384 + + G +D+A + AMK P + + + + + L + Sbjct: 664 MIHTNMGIALADQGKVDEAASHFKAAMKSQPDFAPAYYNMGYVLAKQGRHQE-ALEYFSK 722 Query: 385 ALHAMPD 391 A+ PD Sbjct: 723 AVEIKPD 729 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 27/227 (11%), Positives = 63/227 (27%), Gaps = 37/227 (16%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------- 216 ++G+ A+ + AL + P+ + + + A + + Sbjct: 539 KMGNPEKARERLSIALALDPENALIQTVMANVLSAEGDLEEARVHYQKALELEPDQSQIH 598 Query: 217 -------------NAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLKL 255 + E A+ + + +G + ++L+L Sbjct: 599 YAYGNLLSKLGEVDQAEEQHRAALENDPEDPRFHANMANTLSRQGRYGEAMTHYHKALEL 658 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGK 310 + M +L Q K +A + K P+ A Y Sbjct: 659 EPGNAMIHTNMGIALADQGKVDEAASHFKAAMKSQ--PDFAPAYYNMGYVLAKQGRHQEA 716 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L+ + EI + ++ G +++A A++ P Sbjct: 717 LEYFSKAVEIKPDYGQAYYEAGNSLAHTGHLNEAVQSYKKALEQEPD 763 Score = 38.0 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 74/188 (39%), Gaps = 15/188 (7%) Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENA 237 +AL PD+P + Y+ + ++ A+T + + + + + + SL Sbjct: 416 RALQYVPDSPRPWYNLGNAYMAKRMYTEAVTAFEKTLELDPGDPDALNNLACAQVSLGLL 475 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D+ + + E+LK NS +A ++ N+ +A + + + P +A Sbjct: 476 DE-----ATANVREALKTDPNSAVAYYNLGNAMAKSNRLSEAVMYYDMAVGLKPDFPMAQ 530 Query: 298 ------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +Y E +L AL L + E+ +++ + G +++A A Sbjct: 531 CNLGYLLYKMGNPEKARERLSIALAL---DPENALIQTVMANVLSAEGDLEEARVHYQKA 587 Query: 352 MKIAPRKE 359 +++ P + Sbjct: 588 LELEPDQS 595 >gi|149176413|ref|ZP_01855027.1| putative methyltransferase [Planctomyces maris DSM 8797] gi|148844765|gb|EDL59114.1| putative methyltransferase [Planctomyces maris DSM 8797] Length = 1398 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 15/230 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y A + E +++ +Y+L G+ A KAL++ P P Sbjct: 86 GKYQDAIQNYERAIELEPRNAAFIYNLAITLANSGEKQRAIDAYRKALELKPGYPDALIN 145 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + E AI Q + A + + + L A + D A+Y A++ Sbjct: 146 LGNLLLETDEVEEAIEICKQVVRLAPDLHTAQFNLANALAKA-EDTESADAAYQRALQ-- 202 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI-------WKVNPHPEIANIYTHLLSEN 306 L + + A L ++ K A IL K W++ + +YT + Sbjct: 203 -LAPDHLDTMKNYAVFLSAKEKYETAISILRKAAILEPGNWEILN--NLGIVYTRQEDFD 259 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 T +K + ++ E + K E A +K P Sbjct: 260 TA--IKCFHDALNHSPDNCEIRFHLGKALEESKQTTDAMLTYRAVLKKQP 307 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 71/198 (35%), Gaps = 9/198 (4%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 + ++ + L +A + A++ + + Q +T +++ + + Sbjct: 300 RAVLKKQPNHPGAAFHLGSMLAAL-GDFEQAYDIFQRLYQSDSTNTASLFGMGCVRHQQR 358 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + SA Y + + PD +++ Y A ++Q E + A L Sbjct: 359 KIGSAVGYFETLVSLEPDHLQSRLKLIELYSTQLRVKEATHHIDQ----GLEAHPECAAL 414 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + K + + + KL D + A S ++A+ LEK ++ Sbjct: 415 WNYKGHIQNQKKQFKKALKSFLRARKLDDGYLPVYCNLATVYQSMGMFQEAKQALEKAYE 474 Query: 289 VNPHPE----IANIYTHL 302 + P PE +A+++ + Sbjct: 475 LIPQPEYRLALASLFPPI 492 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 33/292 (11%), Positives = 82/292 (28%), Gaps = 11/292 (3%) Query: 70 AMLFHMLHKRNYDKGY-KALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 + GY AL G + + + A ++ V + + L Sbjct: 124 RAIDAYRKALELKPGYPDALINLGNLLLETDEVEEAIEICKQVVRLAPDLHTAQFNL--A 181 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A + LQ+ + + +A KA + P Sbjct: 182 NALAKAEDTESADAAYQRALQLAPDHLDTMKNYAVFLSAKEKYETAISILRKAAILEPGN 241 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + Y +++ AI + ++ + R + ++LE + + Sbjct: 242 WEILNNLGIVYTRQEDFDTAIKCFHDALNHSPDNCEIR--FHLGKALE--ESKQTTDAML 297 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLS 304 LK N A+ L + +A I +++++ N Sbjct: 298 TYRAVLKKQPNHPGAAFHLGSMLAALGDFEQAYDIFQRLYQSDSTNTASLFGMGCVRHQQ 357 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + + ++S + + ++ + +A ++ P Sbjct: 358 RKIGSAVGYFETLVSLEPDHLQSRLKLIELYSTQLRVKEATHHIDQGLEAHP 409 >gi|94987039|ref|YP_594972.1| TPR repeat-containing protein [Lawsonia intracellularis PHE/MN1-00] gi|94731288|emb|CAJ54651.1| FOG: TPR repeat [Lawsonia intracellularis PHE/MN1-00] Length = 803 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 65/209 (31%), Gaps = 14/209 (6%) Query: 86 KALYT---GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 AL G+ + + A+K E ++ A + Sbjct: 602 NALARNSLGVCIASLGHYNEAQKHFKEA--LQLLPTEPMISYNLGMTYQNLGDITSATQY 659 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L + T +A L + + A +Y +AL I+ + Sbjct: 660 FHNCLTLCPTHLYAAIRLGALAESTNNTQEAIKYYNQALSINKKHALPYRHLAMLAFKEG 719 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIM 261 + +A +L+Q +N + L+ + D G D + + + + + Sbjct: 720 KKEKAREYLHQAL----LYNPHDTTTLMLMAKMYLDSGEDPEIAETLSRQCVAQRPDIKS 775 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVN 290 I A++L +Q KK++A W Sbjct: 776 NWIEFARALEAQGKKKEANK----AWLKA 800 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 15/197 (7%) Query: 201 AKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + AI KN + + + + G + E+L+L Sbjct: 582 RGDLFSAIEEYKLALLADKNNALARNSLGVCIASL-------GHYNEAQKHFKEALQLLP 634 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT---VGKLKRA 314 M S + + A + P A I L+E+T +K Sbjct: 635 TEPMISYNLGMTYQNLGDITSATQYFHNCLTLCPTHLYAAIRLGALAESTNNTQEAIKYY 694 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH 373 + INK+ ++ +A + G ++A A+ P +L+A++ + Sbjct: 695 NQALSINKKHALPYRHLAMLAFKEGKKEKAREYLHQALLYNPHDTTTLMLMAKMYLDSGE 754 Query: 374 NTDKILYWTQSALHAMP 390 + + A Sbjct: 755 DPEIAET-LSRQCVAQR 770 >gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Trigonal Crystal Form) gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix (Orthorombic Crystal Form) Length = 136 Score = 57.6 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + Y+ A E + L++ A Y+L + GD + A Y KAL++ P + Sbjct: 10 AYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 69 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + Y ++ AI + + E + A +GD + Sbjct: 70 EAWYNLGNAYYKQGDYDEAIEYYQKAL----ELDPRSAEAWYNLGNAYYKQGDYDEAIEY 125 Query: 249 AIESLKLCD 257 ++L+L Sbjct: 126 YQKALELDP 134 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 7/125 (5%) Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 +GD + ++L+L S A + Q +A +K +++ P A Sbjct: 14 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--PRSAEA 71 Query: 299 YTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +L + ++ + E++ S E+ + + G D+A A++ Sbjct: 72 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 131 Query: 354 IAPRK 358 + PR Sbjct: 132 LDPRS 136 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 2/89 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + + E L + Y+ A E + L++ A Sbjct: 49 GDYDEAIEYYQKALELDPRSAEAWYNL--GNAYYKQGDYDEAIEYYQKALELDPRSAEAW 106 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPD 186 Y+L + GD + A Y KAL++ P Sbjct: 107 YNLGNAYYKQGDYDEAIEYYQKALELDPR 135 >gi|149713893|ref|XP_001503021.1| PREDICTED: similar to Transmembrane and TPR repeat-containing protein 1 [Equus caballus] Length = 774 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 86/272 (31%), Gaps = 23/272 (8%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 R A + LQ+ A+++L A ++ P+ Sbjct: 418 LTRDTAEAKMYYQRALQLNPQHNRALFNLGNLLKSQDKKEEAIILLKDSIKYGPEFADAY 477 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A KN + + L + D G + + Sbjct: 478 SSLASLLAEQERFKEAEDIYQAGIKNCPDSSD----LHNNYGVFLVDTGSPEKAVAHYQQ 533 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTH-LL 303 ++KL + +A + + S ++A + K ++P + +Y + Sbjct: 534 AIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKAEILSP---LGALYYNTGR 590 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRKEIFL 362 E + + A + E + ++++ MG +A + + A E + Sbjct: 591 YEEALQIYREA---AALQPSQRELRLALAQVLAVMGQTKEAEKMTIHIVSEEAGCLECYR 647 Query: 363 LLAQI-EQANSHNTDKILYWTQSALH-AMPDP 392 LL+ I + H+ K L AL DP Sbjct: 648 LLSAIYSKQELHD--KALDAIDKALRLKPKDP 677 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 96/283 (33%), Gaps = 37/283 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + + A + + H+ +V L ++ + ++A E + LQ+ Sbjct: 515 GVFLVDTGSPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGDNSVAEEWYKRALQVA 572 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT- 209 E + L G A + +A + P + A+ Q + + A Sbjct: 573 RKAEI-LSPLGALYYNTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKM 631 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 ++ + A R + I E DK + ++L+L I ++ Sbjct: 632 TIHIVSEEAGCLECYRLLSAIYSKQELHDK-----ALDAIDKALRLKPK-DPKVI--SEL 683 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 ++ + + + +L+K ++ E+N + ++ + Sbjct: 684 FFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQAWM 719 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G+ A A A+++ P ++ LA++++ Sbjct: 720 NMGGIQHIKGNYVSARAYYERALQLVPDSKLLQENLAKLDRLE 762 >gi|124022007|ref|YP_001016314.1| hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT 9303] gi|123962293|gb|ABM77049.1| Hypothetical protein P9303_02961 [Prochlorococcus marinus str. MIT 9303] Length = 594 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 90/273 (32%), Gaps = 36/273 (13%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 A++++ S+ E + + + A ++ Sbjct: 17 EKKRAKRLNKSESRGEALQKEAMNF-------HMQGDIENAEYLYRQAIE---------I 60 Query: 159 SLYFESC--------RIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 E+ + D A KA++ PD P + + +A+ Sbjct: 61 GFLHEAIFSNLGVICKNSDRQEEAIALYEKAIETRPDHPDAYRNLGNLHKELGNLDQALA 120 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + A + + + G++ + ++SL+L ++ A + + Sbjct: 121 ATLKSLELKPD--NPDAHINLGG--IYKELGNLDQALTSTLKSLELKPDNPTAYMNLGRI 176 Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 +A K ++ P H + IY L + + L ++ ++ Sbjct: 177 YQDLGNLDQALASTLKSLELKPDNPTAHMNLGIIYRDLRNLD-QALASSLQSL-QLKPDN 234 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + + I ++G++DQA A + ++++ P Sbjct: 235 HTAYINLGVIYQDLGNLDQALASTLKSLELKPD 267 >gi|261253449|ref|ZP_05946022.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891] gi|260936840|gb|EEX92829.1| hypothetical protein VIA_003474 [Vibrio orientalis CIP 102891] Length = 389 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 86/289 (29%), Gaps = 55/289 (19%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + + + +A + A + E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGFLDRAEKIFEQLVDEPDHREA 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ L + + + A YA Sbjct: 143 ALQQLVAIYQQTREWSKAIHYA------------------------------------SL 166 Query: 216 KNAKEWNRNRA---ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 R R +++ +G+ + + ++L + ASI K + Sbjct: 167 LVKMGRKRMRTSIGHFWCELAMQEQAEGNHTQARQNFKKALTEDPRCVRASIALGKLYLE 226 Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ LE + + P +A Y HL E+ + R + S E Sbjct: 227 DEDYKRTIAYLEAVLEQDSDFVSEVLPTLAECYHHLGQEDELLNFLR-QCIVGKAGVSAE 285 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370 ++++++ + A + P + L+ A+ E+ Sbjct: 286 --LMLAQMVAKHDGPGAAQELLTRQLVKNPTMKGFYRLMDYHLAEAEEG 332 >gi|325919942|ref|ZP_08181927.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas gardneri ATCC 19865] gi|325549558|gb|EGD20427.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas gardneri ATCC 19865] Length = 421 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 59/360 (16%), Positives = 110/360 (30%), Gaps = 29/360 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G YR + L IL L L++ Sbjct: 7 VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLILVIALLVLWLVW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVTASEDDDVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYF----ESCRIGDLNS 172 L V++A A A + + + T L E+ D + Sbjct: 120 ALAT--AVRVADARGDDASATALAQQLAERDPTAHALLQGERHLARQRPVEAINALDSAN 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ + L + T+A+ Q + + + Q +N A L Sbjct: 178 AQPLPARGLLLR------TQALAQIGRADEAYGQLGALRQQAVLAPDAYNALEATLAEQT 231 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 L+ D + + + L+ + A A L + A LE+ Sbjct: 232 LLQAGDANALAERWEALPKPLRTYPAVVGAYAQRAAILHWDD---AAVHSLEQALDTQWD 288 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + +Y L E + A R +S L+ ++++A QA A+ Sbjct: 289 ESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTMARLARHQQQWSQAEEFLHRAV 348 >gi|73670643|ref|YP_306658.1| O-GlcNAc transferase, p110 subunit [Methanosarcina barkeri str. Fusaro] gi|72397805|gb|AAZ72078.1| O-GlcNAc transferase, p110 subunit [Methanosarcina barkeri str. Fusaro] Length = 349 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 82/240 (34%), Gaps = 11/240 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + + A +A + + +LQ A+ + G +A+ KAL Sbjct: 80 TLMEAGKTAFLLGLDELAVREFKEILQQNPQNVEALSGYGTVLAKEGKNAAARIQYEKAL 139 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + +P K+ A ++ +R + + +G Sbjct: 140 EFNPYHVDTLCNYGYLLYRLKKLDEAEEVYSRALI----LDRENVSAHCGYGILLSKRGQ 195 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV---ILEKIWKVNPHPEIANI 298 + + +L+L + ++ A+ L + + AE + K +P P I Sbjct: 196 KNEASYHYTRALELDPGHVESNFRYARLLEEKGEPLDAEKHYIVALKAESADPRPHI--F 253 Query: 299 YTHLLSENTVGKLKR--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y LL+E+ R ++N E VE+ +++ G +A + A+++ P Sbjct: 254 YARLLAEHGFIHGARVHFRCALKLNPEDVEAHCEYARLLARFGHRHEAEVQYKKALELDP 313 >gi|304313076|ref|YP_003812674.1| hypothetical protein HDN1F_34590 [gamma proteobacterium HdN1] gi|301798809|emb|CBL47042.1| Hypothetical protein HDN1F_34590 [gamma proteobacterium HdN1] Length = 881 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 21/257 (8%) Query: 133 ERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A +KL + Q A R V R GDL A++Y ++ +D + Sbjct: 303 AGNLQEAEQKLMRLYQQYNEPDAAGRLLGVI-----RMREGDLEGAEQYFSQHIDPETAS 357 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P + + + + S A+ L + E A LL L G Sbjct: 358 PEALRVLAENQLRLNKVSEAMHLLEANLSRSPE----DADLLGVYGLAALANGQSEKGLE 413 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHL 302 ++LK+ + A+ + + + A LEK K P ++ IY Sbjct: 414 ALQKALKIAPSKTGLRATLAQYYLQKGDAKSAIDQLEKAIKQAPSELALRGQLVQIYLRE 473 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + + V +A ++E+ + + L I ++G++ QA A+ + P L Sbjct: 474 KNLDAVK--NQAAQIEKDFATNADGLAAAGSIYTQLGAVKQAKPALEKALSLEPTNPNAL 531 Query: 363 LLAQIEQANSHNTDKIL 379 I + + K Sbjct: 532 TAMVILELKGGDLKKAR 548 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 28/273 (10%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A LE L + T A+ ++ + GDL A+ YA ++ P++ +V Sbjct: 511 KQAKPALEKALSLEPTNPNALTAMVILELKGGDLKKARSYAETIINTDPNSLRAFRLLVN 570 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHDAIESLKL 255 + + ++ ++ + R A A + KGD+ + E+L Sbjct: 571 IHARE----NTLDAFVKQLQHISD-ERINAWGADATLSDYFRSKGDLTQALKHIKEALAR 625 Query: 256 C-----DNSIMASICAA---KSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLS 304 A+ A K+ + Q A L + + + T + S Sbjct: 626 SGFQGYPKLA-ATQLYALITKAQLRQGDMEAARKSLMEGLQNDGNSLELLNLLALTEIES 684 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 K +++ + S ++ + + + G D A P + + L Sbjct: 685 GKYAEAQKIVTQIQSAHPNSQIPDLLRADLLIAQGDKDAARNALQKLWSANPTDGVAIRL 744 Query: 365 AQIEQANSHNT----------DKILYWTQSALH 387 + + + + + W + L Sbjct: 745 GGLLETQAQDDFSTEWTTKLPSSVEAWLRLGLR 777 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 67/198 (33%), Gaps = 13/198 (6%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 I + A+K+ + + H N + LL + +A+ + A L+ + T Sbjct: 682 IESGKYAEAQKIVTQIQSAH--PNSQIPDLLRADLLIAQGDKDAARNALQKLWSANPTDG 739 Query: 155 FAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ E+ D ++ + P + + + + + A + Sbjct: 740 VAIRLGGLLETQAQDDFST------EWTTKLPSSVEAWLRLGLRKQAQNDQAAA----ER 789 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 E A L + +KGD+ ++ A ++ N L+ Sbjct: 790 AYSKVIELRPTEARALNNLAWIRCEKGDLKSAEELAERAVASSPNDAAVLDTYGWILLKA 849 Query: 274 NKKRKAEVILEKIWKVNP 291 KK A+ +L+K ++ P Sbjct: 850 GKKADAQKMLKKAHELAP 867 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 100/300 (33%), Gaps = 10/300 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREF 155 + A + + Q + + L+ L QIA Q + A E E + + P + Sbjct: 121 GKVKTAEEHLAKPPQNLSATQQELIALYRTQIAAQNGQISQASEGFEKLKKSKNPEIHKQ 180 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A + R G + ++ AL +P+ A +A L+ Sbjct: 181 ATLGRIVLALRSGAHDEVEKLLAAALQENPEFTEALIIKASIASEADNLDQAEELLSHAL 240 Query: 216 KNAKEWN---RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--L 270 + RA +L + +G + + A A+S L Sbjct: 241 MTLPATDMITEIRANVLTGLANVLTRQGHTAEALIYTRMLADARPGADNAKEQFAESLEL 300 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVES 327 + ++AE L ++++ P+ A + + G + + + S E+ Sbjct: 301 LKAGNLQEAEQKLMRLYQQYNEPDAAGRLLGVIRMREGDLEGAEQYFSQHIDPETASPEA 360 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 L ++++ L + + +A + +P L + + + ++K L Q AL Sbjct: 361 LRVLAENQLRLNKVSEAMHLLEANLSRSPEDADLLGVYGLAALANGQSEKGLEALQKALK 420 >gi|116629550|ref|YP_814722.1| TPR repeat-containing protein [Lactobacillus gasseri ATCC 33323] gi|116095132|gb|ABJ60284.1| TPR repeat protein [Lactobacillus gasseri ATCC 33323] Length = 433 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 10/253 (3%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A++ Sbjct: 76 FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 135 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A ++P+ + + + L+ ++ A+ + K K + ++L R Sbjct: 136 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGE---VVLSQRIAA 192 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 K + I+S + SI A A ++S + A L+++ + P Sbjct: 193 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYLDQVIETQPDYVN 252 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 253 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 310 Query: 351 AMKIAPRKEIFLL 363 ++IAP L Sbjct: 311 GLEIAPDNSDLRL 323 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 I AR+ + E + ++ Y A + + T Sbjct: 128 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 180 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211 + S RI + +A + +A+ + + A + AI +L Sbjct: 181 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYL 240 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +Q + ++ +L A + E+ ++ +++ + + +L + AK+ Sbjct: 241 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 296 Query: 272 SQNKKRKAEVILEKIWKVNP 291 + N+ +AE +L+K ++ P Sbjct: 297 NLNQLDEAERLLKKGLEIAP 316 >gi|20092070|ref|NP_618145.1| O-GlcNAc transferase, p110 subunit [Methanosarcina acetivorans C2A] gi|19917285|gb|AAM06625.1| O-GlcNAc transferase, p110 subunit [Methanosarcina acetivorans C2A] Length = 352 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 83/236 (35%), Gaps = 17/236 (7%) Query: 129 IALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A N+A + E +L+ Y R+G L +A+ +AL+I P Sbjct: 89 TASLLGLGNLAAREFEEVLEDNPENIEALCGYGAMLA--RLGKLEAARAQYERALEIHPY 146 Query: 187 APWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + + ++ A + K A + + +G M Sbjct: 147 HI---DTLCHYGCLLYRLRDTDGA----EEAYKKALLLDPRHVGAHCGYGILLYKRGQMN 199 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302 + + +L+L + ++ A+ L+ + + +AE K +P + ++ Y L Sbjct: 200 DANYHFSRALELDPGHVESNFHYARLLVEKGEPLEAETYYIVALKADPENSKLHLYYARL 259 Query: 303 LSENTVGKLKRALRLEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L+E+ + R + VE+ + + G +A + A+++ P Sbjct: 260 LAEHGIVHGARVHYRYALKIDPGDVEAHCEYAGLLARFGHRHEAEVQYKKALELDP 315 >gi|254251707|ref|ZP_04945025.1| hypothetical protein BDAG_00903 [Burkholderia dolosa AUO158] gi|124894316|gb|EAY68196.1| hypothetical protein BDAG_00903 [Burkholderia dolosa AUO158] Length = 395 Score = 57.3 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 51/379 (13%), Positives = 115/379 (30%), Gaps = 34/379 (8%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 V I + S + + + L + R P + + +K Sbjct: 28 GQVLIVYPPYRVDVSLNLFVIAIVVLFIVVYALLRIVRNIWRMPQRVAAYRARSRNEKAQ 87 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +L + ++ A A K Q A + AH E Sbjct: 88 ASLRDAIANLYAGRFSRAEKAARDALAVDAN-----------QGAASLVAATAAHRMHEY 136 Query: 146 MLQIPATREFAVYS-----LYFESCRIGDLNSAQRYATKALDIS--PDAPWVTEAVVQQY 198 + + L + D A ++ + ++ Sbjct: 137 ARRDDWLSKVDAPGWQDARLLATADMRADARDADGALAALAEMQAGGKRIHAQQVALRAQ 196 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 K W+ + L + + + + A+ L ++ EN + HDA L++ + Sbjct: 197 QQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENLLR----ERRHDADALLEVWQS 251 Query: 259 SIMA-------SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 A + AA+ L+ ++ +A I+E N + Y + + + Sbjct: 252 LSPAERQSPRLADLAAELLVPLERRTEARRIVEDALAHNWDARLLRRYPDTAGADALPLI 311 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQI 367 ++A + + E + L + ++ + +A + A+K+A LA++ Sbjct: 312 QKAEGWKNDHPEDADLLFALGRLCQQQQLWGKAQSFLEAALKLADNDALKVRTHRALARL 371 Query: 368 EQANSHNTDKILYWTQSAL 386 + ++ +SAL Sbjct: 372 FEHLGETDKAAKHYRESAL 390 >gi|14626032|emb|CAC44018.1| BcsC protein [Salmonella typhimurium] Length = 1053 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 163 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 222 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 223 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 282 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 283 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 342 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 343 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 402 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 403 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 462 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 463 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 507 >gi|332029693|gb|EGI69572.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Acromyrmex echinatior] Length = 1087 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 104/306 (33%), Gaps = 31/306 (10%) Query: 67 SCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNE 119 P L + H GY L L++ A ++ A + + Q Sbjct: 146 QLPEALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRS 203 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRY 176 L LL+ + + A L+ TR A +L G++ A + Sbjct: 204 DLGNLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHH 255 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 KA+ + P+ + A+ + RA+ + + N A++ + Sbjct: 256 FEKAVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 311 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 ++G + + +++L N A A +L + + +AE ++ P H + Sbjct: 312 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADS 371 Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 N ++ E +L LE E + ++ + + G +++A A Sbjct: 372 LNNLANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEA 429 Query: 352 MKIAPR 357 ++I P Sbjct: 430 IRIQPT 435 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 349 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 405 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 406 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 465 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 466 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 515 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 284 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 343 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + A L + ++G + + +++L++ Sbjct: 344 ALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKREQGYIEEATRLYLKALEVF 399 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 400 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 457 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 458 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 503 >gi|193216010|ref|YP_001997209.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089487|gb|ACF14762.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC 35110] Length = 595 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 21/177 (11%), Positives = 62/177 (35%), Gaps = 11/177 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + I L K + A + + G + ++++ Sbjct: 422 AKNERFQNIIEPLEHAVKLRPDL----ASAHFGLGMAYLETGLFGKAIEAFNQAVRFNPE 477 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313 A + K +A+ LE+ K+ P H ++ +++ E + +K Sbjct: 478 FAQAFAGLGSVYMKLGYKGEAKKALEEAIKLKPEFVDAHLQLGSLFID-EGEYALA-IKS 535 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 + +N ++ ++ ++ ++ ++ A + + +++P LL A ++ Sbjct: 536 FNNITVLNPQNAQAHYLLGQLYIQTNDRAAAMKQLDILDQLSPYLANKLLYALKKRG 592 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 79/258 (30%), Gaps = 48/258 (18%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 +A+ A E +++ A L + A YA KA+ PD Sbjct: 109 AYVAQGNDQKAIAAYEQAIRLNPENVNAYDGLSLVYMKTWQYEKAALYAEKAIQYQPDLT 168 Query: 189 WVTEAVVQQYVLAKEWSRAIT-------FLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + +++ A L + ++ + R L + GD Sbjct: 169 SAQIRLSMAQFQLRQFQEAFQSMNIAQNLLKETLRHHPDSTDARKAL----GMAYLISGD 224 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSL--------------------ISQNKKRKAEV 281 ++ I LK D S+ AA+ + + +KA Sbjct: 225 WNSALSQYI-VLKDQD-----SVLAAELYQEILSQKAEQELQLEFFESMLHKRDVKKAGR 278 Query: 282 ILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 E ++ + + Y E + K A EI +V++L + L + Sbjct: 279 -FEANFQ------LGSAYLRKQEYEKAIEFYKAA---LEIKPNTVDALNALGVCYLNLER 328 Query: 341 IDQAHAKAMLAMKIAPRK 358 ++A + LA+ P K Sbjct: 329 YNEAISVLKLAIDYDPSK 346 >gi|47223130|emb|CAG11265.1| unnamed protein product [Tetraodon nigroviridis] Length = 913 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + D+ +A+ A Sbjct: 551 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAEDVPAARSILALAFQ 608 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 609 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAQE 668 Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + + LK C +S+ + + Sbjct: 669 LCTEALKHYEDFPKLWMMRGQIEDQCENTDKAREAYSQGLKKCPHSVALWLLMSHLEERV 728 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP PE+ L E G A L +E S ++ Sbjct: 729 GQLTRARAILEKARLKNPQSPELWLESVRL--EFRAGLKNIASTLMAKALQECPNSGILW 786 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ A+ + + Q K++ A+K + L +A++ + K W + P Sbjct: 787 AE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEP 844 Query: 391 D 391 D Sbjct: 845 D 845 >gi|51596473|ref|YP_070664.1| tetratricopeptide repeat protein [Yersinia pseudotuberculosis IP 32953] gi|153948939|ref|YP_001400890.1| tetratricopeptide repeat protein [Yersinia pseudotuberculosis IP 31758] gi|170024261|ref|YP_001720766.1| tetratricopeptide repeat-containing protein [Yersinia pseudotuberculosis YPIII] gi|186895523|ref|YP_001872635.1| tetratricopeptide repeat-containing protein [Yersinia pseudotuberculosis PB1/+] gi|51589755|emb|CAH21385.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|152960434|gb|ABS47895.1| tetratricopeptide repeat protein [Yersinia pseudotuberculosis IP 31758] gi|169750795|gb|ACA68313.1| Tetratricopeptide TPR_2 repeat protein [Yersinia pseudotuberculosis YPIII] gi|186698549|gb|ACC89178.1| Tetratricopeptide TPR_2 repeat protein [Yersinia pseudotuberculosis PB1/+] Length = 389 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 83/253 (32%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ + ++ Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFNQLVEEQDFRLG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W AI + K K+ R A +L+ D+ + Sbjct: 143 ALQQLLIIHQATSDWHNAIEVAEKLVKMGKDNQRLEIAHFYCELALQAMGSDDLDKAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPEIANIYTHL 302 ++ SI + +++ + K LE++ + P ++ Y HL Sbjct: 203 LKKAATADKQCARVSIMRGRVHLAKGEYAKGVEALERVLEQDKEVVSEALPMLSECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361 R E N + + ++++++ + D A ++ P + Sbjct: 263 QQPQAWANF--LKRCVEDNTGAA-AELMLAEVLEQQEGHDVAQTYINRQLQRHPTMRGFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 >gi|329903550|ref|ZP_08273545.1| porphyrin biosynthesis protein [Oxalobacteraceae bacterium IMCC9480] gi|327548288|gb|EGF32981.1| porphyrin biosynthesis protein [Oxalobacteraceae bacterium IMCC9480] Length = 391 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 105/338 (31%), Gaps = 8/338 (2%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 P +V + S L +L + LL P+ + ++ + Sbjct: 6 NPGNVVFFYPPYRIDLSLNFFLLLLAVLFWLCFLLINALSITQKMPSRVAAYRREKRERE 65 Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G +AL L ++ A K + + N L L+ + A +Q + L Sbjct: 66 GNRALRDSLKALFEGRFGHAEKAATRAG--VSPDNTGLAALIGARAAHRMQQTARRDDWL 123 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + + R + + A + V ++ A+ Sbjct: 124 NQVTEDSGLRTARLMTALELLVDDHQPERALAAVDELNASGTRHIHVLRLALKASHQARH 183 Query: 204 WSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261 WS + + KN R + +A +D+ + S + + D + Sbjct: 184 WSEVLRLVRTLDKNNAMHPAASRRLRELAYDALLSDRSNDAESIRRVWAGVPIADRTTPL 243 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEI 320 ++ AA++ S+ +A I+E+ V + Y + +E + L + E Sbjct: 244 VAVRAAEAFGSRGLGDEARSIVERALAVEWDDRLIKAYRGVAAAEGSAALLAQIEHCEAW 303 Query: 321 ---NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 E + ++ + L+ +A A+ A Sbjct: 304 LMQRPTDPELALTLATLCLKQKLWGKAQRHLEHALSDA 341 >gi|323698623|ref|ZP_08110535.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio sp. ND132] gi|323458555|gb|EGB14420.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfovibrio desulfuricans ND132] Length = 884 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 7/227 (3%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + Y+ A + +L A L G L+ A++ K +P + Sbjct: 37 DGNYSGAIVIYKTILDEHPNELKARLGLAKSYLATGKLDQARKNFEKYQLQNPYDKELGY 96 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + L++ +A+ + K+ E LL L + G+ + + ++ Sbjct: 97 DLARLERLSQNKPKALEYAAAYCKDYPE--SVEGALLFGHLL--LEGGNDVQAEEWFSKA 152 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVG 309 L+L + A I A+ S+ +K A+ + ++ +P A + L +N Sbjct: 153 LQLAPENTEARIGLAQVYKSRGRKDAADKAIAEVLAKDPTNREALYFKAGRELEDKNKKA 212 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + I ++ LE D A A +AP Sbjct: 213 YRQTFTAISDAYPHDAYAKYIKAQAMLEEKKFDTAAQLAKELRSMAP 259 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 122/303 (40%), Gaps = 27/303 (8%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT----REF 155 A + H+ ++ Q L E++++ A + + + P + Sbjct: 210 KKAYRQTFTAISDAYPHD-AYAKYIKAQAMLEEKKFDTAAQLAKELRSMAPKMPYADKTV 268 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQK 214 + S+Y + + A KA+ I PDA + + Y + AI+ L Sbjct: 269 GL-SMYLQK----NYQEAINAYHKAISIRPDAD--SYFFLGLSYYAVGDLETAISHLRVA 321 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 A ++ + R ++ S+ + + S +A + L+ +++ A + A +L + Sbjct: 322 ADRADDYLKAREMI----SMILLQQHRVDESMAEARKVLEKDADNVAARMTLADALTMKG 377 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-TVGKLKRALR-LEEI---NKESVESLV 329 + +A E + K P+ + Y + + N +G +K+A L + +S+ ++ Sbjct: 378 ETEEAIEQYEAVTKNR--PDDSATYLKMGALNYAMGNMKQAETDLARAVTASPDSIRPMI 435 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSALHA 388 I+S ++ G D A A + + + + LL ++E ++ +N DK + A + Sbjct: 436 ILSAFYIKNGEKDMARATLEGGLNGSKTDSVLYFLLGRVELSD-NNVDKAKEYLTKAKES 494 Query: 389 MPD 391 PD Sbjct: 495 NPD 497 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 76/236 (32%), Gaps = 39/236 (16%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L Q+ L+ ++Y + + + + + + GD + A A + ++ Sbjct: 604 LRAQVLLSMKRYEDVLQLCDELEEHSRSAALGLR--TRTYMLKGDFDKAVGSAKQIIEFY 661 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---------------NAKEWNRNRAILL 229 PD P + Y A + + + L + +K +A+ Sbjct: 662 PDQPLGYLTLADIYGGAGDKANQLATLEEGQKLCDSNSSILVALGNVYLASGETKKALSY 721 Query: 230 IARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 I +++ + G + ++L+L + A A + Sbjct: 722 IDAAIKRDENNYMAVTIRGNIYTLLGKDKEAVDSYNKALQLSQRYVPALNNLAMLYLRDP 781 Query: 275 KKR-KAEVILEKIWKVNP-HPEIANIY-----THLLSENTVGKLKRALRLEEINKE 323 K R +A + + P P + + + + ++ V L++AL N + Sbjct: 782 KTRLEALRLSYTAYMQRPGEPAVLDTFGYALAVNGRNDEAVQVLEKALENAGENPD 837 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 35/279 (12%), Positives = 80/279 (28%), Gaps = 35/279 (12%) Query: 107 HSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY-SLY 161 S + + + + + A E+ E + + P + Sbjct: 347 ESMAEARKVLEKDADNVAARMTLADALTMKGETEEAIEQYEAVTKNRPDDSATYLKMGAL 406 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G++ A+ +A+ SPD+ + Y+ E A L Sbjct: 407 NYAM--GNMKQAETDLARAVTASPDSIRPMIILSAFYIKNGEKDMARATLEG----GLNG 460 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-- 279 ++ ++L ++ + ++ + ++ I A ++Q A Sbjct: 461 SKTDSVLYFLLGRVELSDNNVDKAKEYLTKAKESNPDNSDPYITLAALHLAQKNPEGALT 520 Query: 280 --EVILEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLV 329 +LE+ P+ + + + E + S E+ + Sbjct: 521 EYTALLERK------PDYVRAWLGKALVLQLLHRPDEAEASFQ-----EALKTNSPEAYL 569 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367 + + G DQA A P + L AQ+ Sbjct: 570 SYAGSLVRGGKPDQALAVLDDGRGKLPFNASLERLRAQV 608 >gi|225849348|ref|YP_002729512.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643614|gb|ACN98664.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 556 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 87/232 (37%), Gaps = 21/232 (9%) Query: 135 QYNIAHEKLEMM----LQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +Y+ A E LE + + P + + +ES D A+ + PD Sbjct: 280 KYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYESL--NDYKKAKEIYEELYQQQPDNQE 337 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + Q YV KE+ +A+ N+ R +L+A + +G+ + Sbjct: 338 LVDRLTQVYVNLKEYDKALDVYNKLYTQNPNDYR----ILLAMADIEDKRGNTQRALELV 393 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIY--THL 302 E+ K+ + A L ++AE L K ++ P +P+ + Y + Sbjct: 394 QEAEKIKPDDATVYFLKAIYLDKLKNWKEAEKALLKALELRPNYPDALNYLGYTYIDRDI 453 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + + +AL L N ++S ++ + G +A+ +K Sbjct: 454 NVDKGIELVNKALSLAPDNPAYLDS---LAWGYYKKGDYKKAYEILEKVLKK 502 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 94/261 (36%), Gaps = 26/261 (9%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNS 172 ++ VY +I L E A E L+ L+ PA + LY + R + Sbjct: 164 DDPNVYFKLARIYLFENNLQKAEEYLKQTLKIDKNFKPAWQILGE--LYKQQKR---YDE 218 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + L +P + Q YV ++ A +++ N L+ + Sbjct: 219 AIKLYKSVLQDNPQNLDALNRLFQVYVDIDDFENASKTIDK----IITLNPKDNDALLKK 274 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 L D +++K +++ A + S N +KA+ I E++++ Sbjct: 275 FLLYIKYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYESLNDYKKAKEIYEELYQQQ-- 332 Query: 293 PE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P+ + +Y +L + L +L N L+ ++ I + G+ +A Sbjct: 333 PDNQELVDRLTQVYVNLKEYDKA--LDVYNKLYTQNPNDYRILLAMADIEDKRGNTQRAL 390 Query: 346 AKAMLAMKIAP-RKEIFLLLA 365 A KI P ++ L A Sbjct: 391 ELVQEAEKIKPDDATVYFLKA 411 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 99/232 (42%), Gaps = 17/232 (7%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +++Y+ A + + +LQ A+ L+ I D +A + K + ++P + Sbjct: 213 QKRYDEAIKLYKSVLQDNPQNLDALNRLFQVYVDIDDFENASKTIDKIITLNPKD---ND 269 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIE 251 A++++++L ++ +A L +K KE + A ++ + E+ + D + E Sbjct: 270 ALLKKFLLYIKYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYESLN--DYKKAKEIYEE 327 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IANIYTHLLSENTVG 309 + ++ + ++ + KA + K++ NP+ + I + E+ G Sbjct: 328 LYQQQPDNQELVDRLTQVYVNLKEYDKALDVYNKLYTQNPN-DYRILLAMADI--EDKRG 384 Query: 310 KLKRALRLE----EINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAP 356 +RAL L +I + + + I L+ + + +A + A+++ P Sbjct: 385 NTQRALELVQEAEKIKPDDATVYFLKA-IYLDKLKNWKEAEKALLKALELRP 435 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 26/219 (11%), Positives = 72/219 (32%), Gaps = 17/219 (7%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A +A P+ V +V Y+ K+ +A L + ++ + Sbjct: 114 PEKAISTLEEAYKRFPNNEKVISTLVDYYLENKQIDKARQLLEK----LSTIKKDDPNVY 169 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + ++ + ++LK+ N A + Q + +A + + + + Sbjct: 170 FKLARIYLFENNLQKAEEYLKQTLKIDKNFKPAWQILGELYKQQKRYDEAIKLYKSVLQD 229 Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 NP + +Y + ++ K ++ +N + ++L+ + + D+A Sbjct: 230 NPQNLDALNRLFQVYVDI--DDFENASKTIDKIITLNPKDNDALLKKFLLYI---KYDKA 284 Query: 345 HAKAMLA---MKIAPRKEIFLLLAQIEQANSHNTDKILY 380 +K P + + + ++ K Sbjct: 285 KEILEDLQKTVKENPDNLFAKFMLGMAYESLNDYKKAKE 323 >gi|153206894|ref|ZP_01945712.1| hemY protein [Coxiella burnetii 'MSU Goat Q177'] gi|212219576|ref|YP_002306363.1| HemY [Coxiella burnetii CbuK_Q154] gi|120576967|gb|EAX33591.1| hemY protein [Coxiella burnetii 'MSU Goat Q177'] gi|212013838|gb|ACJ21218.1| HemY [Coxiella burnetii CbuK_Q154] Length = 392 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 50/379 (13%), Positives = 114/379 (30%), Gaps = 42/379 (11%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + I + + T+ + + L + ++F + + + Sbjct: 21 MTRDTGYLLIVYRHWSIETTLWAAILSLLILFILFYIIFRLLGRAARLSKNIHRWRKMKQ 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 Y + + GL +A P A +K+ LV L A +Q Sbjct: 81 YRRARQLTTAGLCELAEGRWPSAEQKLVKGAK----ITKNPLVNYLAAAQAANAQQSYER 136 Query: 140 HEKLEMML---------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + + + TR A + +P+ Sbjct: 137 RDNYLRLAHTKAKGSDIAVDLTRA-------RLQISKNQWEQALATLERINRANPNHACT 189 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA- 249 + + Q YV ++W + L + +K E A +L+ +K + A Sbjct: 190 LQLLKQVYVHLQDWEKLRHLLPRLRKQKVE---------SAEALDAFEKIIYVNLLSAAD 240 Query: 250 ---IESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 ++L + I SLI ++ KA ++E K + + + Sbjct: 241 RKGKQALIAMWNSFPRRSTQEIELIDVYTHSLIKYDEGDKAIPLIESALKKEWNSNLVST 300 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y E +L A + + E + + +++ + +A ++K+ P Sbjct: 301 YGLARGEKKTDQLTTAETWLKKYPKEPELFLCLGRLSRREKFLGKARDYLQTSIKLMPSS 360 Query: 359 EIFLLLAQIEQANSHNTDK 377 + L Q+ + + Sbjct: 361 AAYRELGQVYEEQNQKDSA 379 >gi|291514790|emb|CBK64000.1| hypothetical protein AL1_15960 [Alistipes shahii WAL 8301] Length = 601 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 16/217 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A E ++ +T A Y L + A A KA + W Sbjct: 50 IAGDSVRARELFLEAIRNDSTYAPAYYELAANGMYAM-PDEAVELARKAFRLDTTNKWYH 108 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + Q + A + A+ + + + N IL + K + + ++ Sbjct: 109 QFYGQALIYAGRYDEALKVYRRLQTENPKDPDNYRIL----AALYEQKQSPVMALVT-LD 163 Query: 252 SLKLCDNSIMA-SICAAKSLISQNKKRKAE----VILEKI-WKVNPHPEIANIYTHLLSE 305 S +L I S + L++ N+ KA ++E ++ H + ++Y + Sbjct: 164 SAELRFGRIPVLSAMKRRLLVATNQIDKAVVEARAMVEAAPYEAQHHVILGDLYAIAKKD 223 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + L RA + +S +++ G D Sbjct: 224 S----LARAEYDRALQIDSTNVQTLMALADFHAGQQD 256 >gi|307245917|ref|ZP_07528000.1| hypothetical protein appser1_11170 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254890|ref|ZP_07536712.1| hypothetical protein appser9_11260 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259331|ref|ZP_07541058.1| hypothetical protein appser11_11280 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853136|gb|EFM85358.1| hypothetical protein appser1_11170 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862131|gb|EFM94103.1| hypothetical protein appser9_11260 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866567|gb|EFM98428.1| hypothetical protein appser11_11280 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 409 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ +I +S V I ++ S +++ + + + F Sbjct: 2 LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ + A K+ S ++ +E ++ L++ Sbjct: 61 LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 + A A++ L + G N A A + + Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P A +++++ + + K++K +N IL Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203 >gi|307250255|ref|ZP_07532209.1| hypothetical protein appser4_10370 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857696|gb|EFM89798.1| hypothetical protein appser4_10370 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 409 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ +I +S V I ++ S +++ + + + F Sbjct: 2 LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ + A K+ S ++ +E ++ L++ Sbjct: 61 LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 + A A++ L + G N A A + + Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P A +++++ + + K++K +N IL Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203 >gi|172059231|ref|YP_001806883.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6] gi|171991748|gb|ACB62667.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MC40-6] Length = 754 Score = 57.3 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 84/273 (30%), Gaps = 32/273 (11%) Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 +++ A E + + T + +C++G + +A+ + D Sbjct: 18 AGRFDDARVLYEAIRRDEPDQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 ++ AI + A ++ A D GD A+ Sbjct: 73 VYLNNFG-NMLRAHGRLDDAIGAYRRAIALAPDY----AEAHSNLGNALRDAGDADAAML 127 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-SEN 306 ++L L + A +L + + A EK ++P Y ++ Sbjct: 128 SCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP------GYAQARFNQG 181 Query: 307 TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 V + +R + + + + + E ++ A A A + Sbjct: 182 NVLRAQRRPDEAIASYREAIALQPDLHAAHHALGMLLFERDDLEAAVASLTRAAESGEAD 241 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F L A +E+A + + AL A PD Sbjct: 242 CLFHLAAALERAGDLDGTVAS--LRRALVAAPD 272 >gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5] gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5] Length = 545 Score = 57.3 bits (137), Expect = 7e-06, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 13/281 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + L Y L +I LA+ E L+ AV SL + A+ Sbjct: 148 PDNPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVLSLGNLYLQEKKFKEAEEL 207 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 L+ P++P + E + + Y + AI K N K N N +L Sbjct: 208 YKSVLEKYPNSPKILEKLAKLYTASGRIEEAIKIYE-KLINLKPRNVNYK---TEYALLL 263 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294 G+ + E + ++ + A +L + + +KA+ I E + P Sbjct: 264 LSTGEFDKAKKILEELYYVNPSNPNVAFAYALTLEATGELKKAKEIYENLLNRFPENIKV 323 Query: 295 ---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + IY L + +L + + + + E L + + + D+A Sbjct: 324 IERLIGIYLDLGNYEDAKRL--IEKAKVLAPDKKEILFLEADYYSKTKQYDKALEILKKL 381 Query: 352 MKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 K P ++ + I N + + A+ P+ Sbjct: 382 EKDYPNDSRVYF-MEAIVYDNLGDIKNAEKALRKAIELDPE 421 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 14/240 (5%) Query: 134 RQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A + L E M P Y L GD+ Y KAL+ Sbjct: 131 GKLREAEKVLLEYMETDPD-NPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYAPAVL 189 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ Y+ K++ A + + +L + G + + + Sbjct: 190 SLGNLYLQEKKFKEAEELYKSVLEKYPNSPK----ILEKLAKLYTASGRIEEAIKIYEKL 245 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKL 311 + L ++ A L+S + KA+ ILE+++ VNP +P +A Y L+ G+L Sbjct: 246 INLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPSNPNVAFAYA--LTLEATGEL 303 Query: 312 KRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQ 366 K+A L E+++ + + I L++G+ + A A +AP K+ I L A Sbjct: 304 KKAKEIYENLLNRFPENIKVIERLIGIYLDLGNYEDAKRLIEKAKVLAPDKKEILFLEAD 363 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 71/232 (30%), Gaps = 45/232 (19%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R + A+ A + L+ PD P + Y KE +A + + K+ Sbjct: 60 LRNKEYEKAKELAKEFLETYPDEPQAYIYLYTIYKFLKEDKKAFEVIKEAYKSFPFNEN- 118 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---- 280 +++ + E +KG + + +E ++ ++ + + +++ +K Sbjct: 119 ---VVLFLANEYINKGKLREAEKVLLEYMETDPDNPLPYYLLGRIYLAKGDIQKGMEYFL 175 Query: 281 VILEKIWKVNPH----------------------------PE-------IANIYTHLLSE 305 LEK P P +A +YT S Sbjct: 176 KALEKKKYYAPAVLSLGNLYLQEKKFKEAEELYKSVLEKYPNSPKILEKLAKLYTA--SG 233 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +K +L + +V + + L G D+A + P Sbjct: 234 RIEEAIKIYEKLINLKPRNVNYKTEYALLLLSTGEFDKAKKILEELYYVNPS 285 >gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120] gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120] Length = 605 Score = 57.3 bits (137), Expect = 7e-06, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 85/305 (27%), Gaps = 60/305 (19%) Query: 126 EVQIALAER-------QYNIAHEKLEMMLQ-IPATREF-AVY-SLYFESCRIGDLNSAQR 175 + Q Y A LQ V ++Y +GD SA Sbjct: 282 DAQAYYQRGLIYEAWQDYQSALADYNQSLQLNSELAVVYGVRANIYRH---LGDYPSALA 338 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + L++ P+ ++ AI NQ + A R++ Sbjct: 339 DGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQALQINPNI----AEAYYGRAIA 394 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + D I + D +S+++ + A + + A + +N P++ Sbjct: 395 HEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQALTIN--PQL 452 Query: 296 ANIY-----------------------THLLSENTVGKLKRALRLEEI------------ 320 + Y L E+ RA + Sbjct: 453 SEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADYTQ 512 Query: 321 ----NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNT 375 N E + L +G +++A A A+K P +LL A I + N + Sbjct: 513 SIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRADILR-NRGDY 571 Query: 376 DKILY 380 + Sbjct: 572 QAAIA 576 Score = 37.2 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 70/213 (32%), Gaps = 18/213 (8%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + F S + D A + A++I+P+ +++ AI +Q + Sbjct: 42 RGITF-SRELKDYQGAIAFFNLAVEINPNYAQAYYHRANARYCLADFTAAIADYDQALQI 100 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM------ASICAAKSLI 271 + A R +GD + + I +++ A+ + L Sbjct: 101 NPTF----AEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLN 156 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS------ENTVGKLKRALRLEEINKESV 325 + ++ E I++ + HP A Y+ + + R +++ Sbjct: 157 NNDQGNYQEAIIDLQQALQWHPYFAAAYS-IRGNIYYKLGEYRQAIADHERAVQLDPNLA 215 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E+ +G+ +A A ++I P + Sbjct: 216 EAYQNRGNAHYALGAYQKAIADYNRTLEINPHQ 248 >gi|238787720|ref|ZP_04631517.1| Cellulose synthase protein C [Yersinia frederiksenii ATCC 33641] gi|238724063|gb|EEQ15706.1| Cellulose synthase protein C [Yersinia frederiksenii ATCC 33641] Length = 1145 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 74/208 (35%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEY-----LVY-----LLEVQI--ALAERQYNI 138 GL + A ++ + T + L+ LL Q AL + Sbjct: 300 GLAYARGGDRAQALRLFEQAQKVDTNGQKSDKWISLIKTNRYWLLSDQGDKALKAGDIAL 359 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + QI + +A+ L + D SA++Y +AL + P + Y Sbjct: 360 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLDPANSSAVRGLANIY 419 Query: 199 VLAKEWSRAITFL-----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A+ +L NQ+ K + + +L ++ A + + +E+ Sbjct: 420 QRESP-QKALNYLNNLPRNQQVKLRDTLDSLQLDMLKQQAEALAARQQWHLAAEKYLEAQ 478 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 K + + + A++L +A+ Sbjct: 479 KRAPDDVWITYRLAQALEQDGHLAQADA 506 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 87/309 (28%), Gaps = 51/309 (16%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G ++ A +I LA++ + Q + L+ L +A+A A + + L+ Sbjct: 346 DQGDKALKAGDIALAQQKYQQARQIDGSDSYALIGL--GDVAVARHDDKSAEQYYQQALR 403 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV--------VQQYVL 200 + AV L R + + +++ + Sbjct: 404 LDPANSSAVRGLANIYQRESPQKALNYLNNLPRNQQVKLRDTLDSLQLDMLKQQAEALAA 463 Query: 201 AKEWS-RAITFLNQKKKNAKE---------WNRNRAILLIARS----LENADKGDMIASY 246 ++W A +L +K+ + L A + L + GD Y Sbjct: 464 RQQWHLAAEKYLEAQKRAPDDVWITYRLAQALEQDGHLAQADAQFHQLVSRKPGDPEQVY 523 Query: 247 HDAI---------ESLKLCDNSIMA-----------------SICAAKSLISQNKKRKAE 280 A+ ++L D A + A+ L + A Sbjct: 524 AYALYLSSTERDSQALAHLDTLPKAQWNDNIRELDQRLKLDQVLTLARQLRGSGDEIGAI 583 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 L + N ++ L + L R+ E+ ++ + + + G Sbjct: 584 TALRQQ-PANTQIDLTLADWALERGDYSEALAGYQRVRTREPENPDARLGEIESYIAAGH 642 Query: 341 IDQAHAKAM 349 + A Sbjct: 643 LSDARQHLQ 651 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 119/343 (34%), Gaps = 50/343 (14%) Query: 73 FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIA 130 ++ D GY L + + A A + + + L + LEV Sbjct: 179 RLYFSQQKADLGYAMLAK-VAANPAGASDAANLWMNTIKEMTVSPQSVAALTHFLEV--- 234 Query: 131 LAER-QYNIAHEKL---EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + Q +IA ++L + ML P R + G +A +AL S Sbjct: 235 FSTGPQADIARKELADQQAMLADPTYQARISGL-----AKVESGAGTTAIPALKQALAAS 289 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRN-------RAILLIARSL 234 P+ P + A+ Y + ++A+ Q +K N ++ ++ R LL + Sbjct: 290 PNDPELLGALGLAYARGGDRAQALRLFEQAQKVDTNGQKSDKWISLIKTNRYWLLSDQGD 349 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292 + GD+ + ++ ++ + A I ++++ + AE ++ +++P Sbjct: 350 KALKAGDIALAQQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLDPANS 409 Query: 293 ---PEIANIYTHLLSENTV---------GKLKRALRLEEIN----KESVESLVIVSKIAL 336 +ANIY + + ++K L+ + K+ E+L + L Sbjct: 410 SAVRGLANIYQRESPQKALNYLNNLPRNQQVKLRDTLDSLQLDMLKQQAEALAARQQWHL 469 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 +A +A + I + L +EQ Sbjct: 470 AAEKYLEAQKRAPDDVWI-----TYRLAQALEQDGHLAQADAQ 507 >gi|115380266|ref|ZP_01467282.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310821105|ref|YP_003953463.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115362721|gb|EAU61940.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309394177|gb|ADO71636.1| TPR repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 435 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 43/300 (14%), Positives = 105/300 (35%), Gaps = 33/300 (11%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G + A N A+++ ++ +E L + +LA+ A + E +L+ Sbjct: 9 RGYEQLKAGNYDEAKRLFLAHEEKAGTASETQALLRQAAASLAKSDLEGAAKVYEQLLER 68 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + L S +G L++A+ +AT A+ + P+ + + + + A+ Sbjct: 69 NPSLPEIYLGLTRISLFLGQLDAARVHATAAVRLGPELGLAWTLLGLVHEAEGDVAGALP 128 Query: 210 FLNQK---------------KKNAKEWNRNRAILLIARSLENADKG-----------DMI 243 L++ + AI + R++E Sbjct: 129 HLSKATELSPSVFLCQFNLGRVLGVAGRPTEAIAALTRAVELEPGNPDGFYTLGIVYKQA 188 Query: 244 ASYHDAIESLKLCDNSIMASI----CAAKSLISQNKKRKAEVILEKIWKV-NPHPEIAN- 297 Y +++ S + + ++ A L + + A IL++ HP + Sbjct: 189 RQYENSLRSFEKAKDLAPKNVDYWATLADVLFEVREFQAARDILDRGLAACGEHPALLEK 248 Query: 298 -IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + T ++ + G ++ R ++ + + ++ +AL D++ A ++ P Sbjct: 249 ALATAMMLSDNAGAIRYVERELKVVPNHEQGWINLANLALLEKDFDKSEKAARELLRRNP 308 >gi|124268183|ref|YP_001022187.1| putative porphyrin biosynthesis-like protein [Methylibium petroleiphilum PM1] gi|124260958|gb|ABM95952.1| putative porphyrin biosynthesis-related protein [Methylibium petroleiphilum PM1] Length = 415 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 56/404 (13%), Positives = 108/404 (26%), Gaps = 31/404 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M +I + + + + ++ V++ W S + + IL L Sbjct: 1 MRNVIWLLLLAIVAVVAASLLGSNDNLVTLYWAPWRVDLSFNLFMVILVGLCLVLNALIQ 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + P R AL L A K Sbjct: 61 AVGLLIGLPRRAREWRVSRRDRIAQGALREALSQYFGGRYGRAHKAAQRAVAIQADTPEL 120 Query: 113 QHTFHNEYLVYLLEVQIA-LAERQYNIAHEKLEMM-LQIPAT----REFAVYSLYFESCR 166 + L +LL + + + + + L T E L E Sbjct: 121 RQDAEFTVLGHLLAAGSLHRLQDRTRRDEQLAQALDLARRNTAARPAEEGARLLAAE-WA 179 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D ++A+ + P T+A+ ++ LA+E A+ K+ Sbjct: 180 LDDRDAARTL-ELLSQLPPGVSRRTQALRLKLKAARLAQEPLEALKTARLLAKHQGFSPA 238 Query: 224 NRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L+ ++E D D + E ++ + A+ L++ A Sbjct: 239 AAQGLMRTLAIEALDTARDTDQTQRVWREFDPADRRDVVVAAHGARQLVALGATEDARTW 298 Query: 283 LEKIW---KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L W P E +A + L R + V + + Sbjct: 299 LRPFWDRVATLPREERDMLAFALADAVDGIGPEWLPRLEAALQSCPGEGALAYGVGRAMM 358 Query: 337 EMGSIDQAHAKAMLAMKIA---PRKE--IFLLLAQIEQANSHNT 375 +A A A + P +L LA + + + Sbjct: 359 ARQLWGKARALLEQAARDEALTPTVRREAWLHLAAMAEQDRDEE 402 >gi|152997227|ref|YP_001342062.1| TPR repeat-containing protein [Marinomonas sp. MWYL1] gi|150838151|gb|ABR72127.1| TPR repeat-containing protein [Marinomonas sp. MWYL1] Length = 392 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 90/262 (34%), Gaps = 25/262 (9%) Query: 134 RQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-- 186 + A + +L P R + L + G L+ A R S Sbjct: 84 GEIQKAINIHQNLLARPEISQREMRMVQLE-LASDFMSAGLLDRAGRLLLNMASTSRKSE 142 Query: 187 -APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMI 243 P + +V Y + W +AI ++ K + A + E K Sbjct: 143 FQPKILTLLVDLYEFEQSWDKAIQIGSELIKETPTKKEIKRLAHFHCEMAQELQKKEQWK 202 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIAN 297 ++ ++L + + + ASI AA L SQ + R A L+ + +P P++ Sbjct: 203 QAFQHYKDALDVDSSCVRASIGAADVLNSQGRYRDAIKELKHAAEQDPEFISIIIPKLKE 262 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAP 356 Y + L+E N++ + +I++ + D A + ++ P Sbjct: 263 CYQKVWGSGGY-----IKFLQEQNQKKPSTALIMALVQHYMETDKDYAEMFLVEQLRQHP 317 Query: 357 RKEIF--LLLAQIEQANSHNTD 376 + F L+ Q+ + +N Sbjct: 318 TIKGFKELISLQLADSQGYNQQ 339 >gi|115378279|ref|ZP_01465447.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310821098|ref|YP_003953456.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364721|gb|EAU63788.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309394170|gb|ADO71629.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca DW4/3-1] Length = 479 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 85/263 (32%), Gaps = 9/263 (3%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A + + Q + + L A Y+ A + E ++Q A ++L Sbjct: 53 ATAEVPSAPAASQDSEDSGPHALFLSALAAFDAGDYDRARKGFEQVVQTSPQSLNAQFNL 112 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + R G L AQ K L P + + Y + ++++ AI A Sbjct: 113 GLIAERQGRLADAQAAYEKVLAKEPGHQPSLLNLGRLYRVQEKFAEAIRLYEGAL--AAP 170 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + + LL ++ G + A L ++ A A Q + R AE Sbjct: 171 GHAHDVALLNNLTVAYRLAGQFAKAEATARRVLARSKDNPEAYKNLALVYYDQGQYRLAE 230 Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++ K+ + + IY L L + + IN + + + ++ Sbjct: 231 LVSANARKLAENDPGVYNNLGMIYLKLN--ERPRALAQFQKAVSINDKFAPGYLNIGAMS 288 Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358 L A A+++ P Sbjct: 289 LAYRDYAGAERAFARAVELDPTS 311 >gi|282164293|ref|YP_003356678.1| hypothetical protein MCP_1623 [Methanocella paludicola SANAE] gi|282156607|dbj|BAI61695.1| hypothetical protein [Methanocella paludicola SANAE] Length = 275 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 81/262 (30%), Gaps = 36/262 (13%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 +E + L + + ++ A + ML I A + L GD + + Sbjct: 21 DEAVSLLKSAHANMQKGNFDRAIVDFKGMLAINKDYAPAHFGLGLAYNEKGDAKKSIKEL 80 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ PD ++ Y+ + A L + K+ +R + Sbjct: 81 KRAIELDPDVVQPRTSLALVYLNLDKPKDAERELEGAVEVGKKDTESR----FYLANVYY 136 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G + E+LKL A ++ ++ KA L K Sbjct: 137 MNGKSDEAVAILKEALKLDPMFSDARYNLGILYMAMGQRSKAIKELLKA----------- 185 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356 E++ + +++ ++K + A + + + +P Sbjct: 186 --------------------IELDPDDIDARRNLAKAYIGQEKYGLAQEQLDIVLLESPK 225 Query: 357 RKEIFLLLAQIEQANSHNTDKI 378 +E LL +++ + Sbjct: 226 DQEARDLLDDLDKEEKAEQKSV 247 >gi|83594191|ref|YP_427943.1| hypothetical protein Rru_A2859 [Rhodospirillum rubrum ATCC 11170] gi|83577105|gb|ABC23656.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170] Length = 784 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 82/285 (28%), Gaps = 43/285 (15%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + P A + + LL Q IALAE + A + + Sbjct: 33 GDRPGALEACRNALAL-APDHP---DLLAAQGAIALAENDASQARAAFDHLAATTPADAR 88 Query: 156 AVYSLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L +G+ A +A +P A + + + A+ L + Sbjct: 89 GWHGLGRVHLALGEPADALLALDRATERAQAPLAGLAHDRALALR-QLGRFDEALATLER 147 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 +++ LL ++ + A + L + A A +L++ Sbjct: 148 ALEHSP----GDCALLTQKARVLERARRPRDAAEVAGQVLARHPDDATAQAVLADALLTL 203 Query: 274 NKKRKAEVILEKIWKVNPHPEIAN-------IYTHLLSENTVGKLKRALRLEEIN----- 321 + +A + P + + T + + ++ R LR+ + Sbjct: 204 GRPGEA---------LAPARALLDRLLAPPAAATPEALLDALERVGRCLRVLGRHGVWVE 254 Query: 322 ---------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++L ++ G A A+ + P Sbjct: 255 DSRRVCARLPDHPDALSALATALWWSGDFPGALVPLRRALVLDPS 299 >gi|148230096|ref|NP_001087833.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase) [Xenopus laevis] gi|51949982|gb|AAH82353.1| Ogt-prov protein [Xenopus laevis] Length = 1063 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 101/300 (33%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVVDAEECYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVVDAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 473 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 474 QIVCDWTDYDERMKKLVSIVAEQLEKNRLPSVHPHH 509 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DRSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|307248003|ref|ZP_07530032.1| hypothetical protein appser2_9850 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306855401|gb|EFM87575.1| hypothetical protein appser2_9850 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 403 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ +I +S V I ++ S +++ + + + F Sbjct: 2 LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ + A K+ S ++ +E ++ L++ Sbjct: 61 LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 + A A++ L + G N A A + + Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P A +++++ + + K++K +N IL Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203 >gi|91200490|emb|CAJ73538.1| similar to N-acetylglucosaminyltransferases (O-GlcNAc transferase) [Candidatus Kuenenia stuttgartiensis] Length = 568 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 11/193 (5%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A K LD++P + Y E +AI+ K + A Sbjct: 207 PEKALTEFQKTLDLNPRDAEAHNYLGIIYYEMNEIEKAISAHQTAVKLKNNYT--DAYNN 264 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-- 287 + +L ++ + +LKL + A L + ++A LEK Sbjct: 265 LGIAL--FAHNNLNEAKDAFETALKLRADFAEAHYNLGLILSKEGNSKEAIASLEKAIAI 322 Query: 288 --KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P H ++ IYT + + L + E+ ++A E+G +D++ Sbjct: 323 SNAIAPAHFKLGEIYTKINMPDKA--LSAYESAFSDDPSYEEAYYNYGELAAEIGDVDKS 380 Query: 345 HAKAMLAMKIAPR 357 ++I P Sbjct: 381 IRAWKKTIEINPT 393 >gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101] gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 1694 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 75/230 (32%), Gaps = 15/230 (6%) Query: 135 QYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +Y A E L+I + + E A KAL+I PD Sbjct: 1193 RYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER--YEEAVAAFEKALEIKPDFHEAWH 1250 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + A+ + + +++ A L +L ++ + ++ Sbjct: 1251 NKGNALIKLERYEEAVAAYEKALEIKPDFH--DAWFLKGNALIKLER--YEEAVAAYEKA 1306 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENT 307 L++ + A +LI + +A EK ++ P+ + + E Sbjct: 1307 LEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIK--PDFHEAWFLKGNALIKLERY 1364 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + EI + E+ + + ++A A A++I P Sbjct: 1365 EEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPD 1414 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 73/230 (31%), Gaps = 15/230 (6%) Query: 135 QYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +Y A E L+I + + E A KAL+I PD Sbjct: 887 RYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLER--YEEAVAAFEKALEIKPDFHEAWH 944 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A+ + + +++ A L +L ++ + ++ Sbjct: 945 NKGNALGNLERYEEAVAAYEKALEIKPDFH--YAWFLKGIALGKLER--YEEAVAAYEKA 1000 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLS-ENT 307 L++ + A +L + +A EK ++ P+ + L + E Sbjct: 1001 LEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIK--PDFHEAWHNKGIALENLERY 1058 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + EI + E+ + ++A A A++I P Sbjct: 1059 EEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPD 1108 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 15/228 (6%) Query: 135 QYNIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +Y A E L+ P E + A KAL+I PD Sbjct: 1397 RYEEAVAAYEKALEIKPDFHEAWHNKGIALGKLER--YEEAVAAFEKALEIKPDFHEAWH 1454 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + A+ + + +++ A L +L ++ + ++ Sbjct: 1455 NKGNALIKLERYEEAVAAYEKALEIKPDFH--EAWFLKGNALIKLER--YEEAVAAYEKA 1510 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENT 307 L++ + A +LI + +A EK ++ P+ + + E Sbjct: 1511 LEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIK--PDFHEAWFLKGNALIKLERY 1568 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + EI + S++ + + EMG IDQA A +I Sbjct: 1569 EEAVAAYEKALEIKPDDEYSIINLGLVKYEMGFIDQAIENWQAATEIN 1616 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 68/193 (35%), Gaps = 11/193 (5%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A KAL+I PD + + + + A+ + + +++ A L Sbjct: 1126 YEEAVAAYEKALEIKPDYHYAWNGKGIALIKLERYEEAVAAFEKALEIKPDFH--DAWFL 1183 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +L N ++ + ++L++ + A +L + +A EK ++ Sbjct: 1184 KGNALGNLER--YEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEI 1241 Query: 290 NPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P+ + + E + + EI + ++ + +++ ++A Sbjct: 1242 K--PDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALIKLERYEEA 1299 Query: 345 HAKAMLAMKIAPR 357 A A++I P Sbjct: 1300 VAAYEKALEIKPD 1312 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 19/232 (8%) Query: 135 QYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +Y A E L+I + + + + A KAL+I PD Sbjct: 309 RYEEAVAAYEKALEIKPDFHEAWFLKGIALINLER--YEEAVAAYEKALEIKPDFHEAWF 366 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A+ + + +++ A L +L N ++ + ++ Sbjct: 367 LKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWFLKGIALGNLER--YEEAVAAYEKA 422 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L++ + A +L + + +A EK ++ P+ + L N +G L+ Sbjct: 423 LEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIK--PDFHEAWF--LKGNALGNLE 478 Query: 313 RALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 R I + ++ + + ++A A A++I P Sbjct: 479 RYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPD 530 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 11/193 (5%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A KAL+I PD + + A+ + + +++ A Sbjct: 1364 YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWHN 1421 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +L ++ + ++L++ + A +LI + +A EK ++ Sbjct: 1422 KGIALGKLER--YEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEI 1479 Query: 290 NPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P+ + + E + + EI + E+ + +++ ++A Sbjct: 1480 K--PDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEA 1537 Query: 345 HAKAMLAMKIAPR 357 A A++I P Sbjct: 1538 VAAYEKALEIKPD 1550 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 19/232 (8%) Query: 135 QYNIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +Y A E L+ P E + E+ A KAL+I PD + Sbjct: 1057 RYEEAVAAYEKALEIKPDFHEAWHNKGIALENLER--YEEAVAAYEKALEIKPDYHYAWH 1114 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A+ + + +++ + + + ++ Sbjct: 1115 NKGDALENLERYEEAVAAYEKALEIKPDYH----YAWNGKGIALIKLERYEEAVAAFEKA 1170 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L++ + A +L + + +A EK ++ P+ + + + KL+ Sbjct: 1171 LEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIK--PDFHEAWNN--KGIALEKLE 1226 Query: 313 R-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 R + EI + E+ +++ ++A A A++I P Sbjct: 1227 RYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPD 1278 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 11/193 (5%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A KAL+I PD + + + A+ + + +++ A L Sbjct: 276 YEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFH--EAWFL 333 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +L N ++ + ++L++ + A +L + + +A EK ++ Sbjct: 334 KGIALINLER--YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEI 391 Query: 290 NPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P+ + E + + EI + E+ + + ++A Sbjct: 392 K--PDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEA 449 Query: 345 HAKAMLAMKIAPR 357 A A++I P Sbjct: 450 VAAYEKALEIKPD 462 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 15/195 (7%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A KAL+I PD + + A+ + + +++ A L Sbjct: 480 YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--DAWFL 537 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +L N ++ + ++L++ + A +L + + +A EK ++ Sbjct: 538 KGNALGNLER--YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEI 595 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEE-------INKESVESLVIVSKIALEMGSID 342 P+ + L N +G L+R I + ++ + + + Sbjct: 596 K--PDFHEAWF--LKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYE 651 Query: 343 QAHAKAMLAMKIAPR 357 +A A A++I P Sbjct: 652 EAVAAYEKALEIKPD 666 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 19/197 (9%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A KAL+I PD + + A+ + + +++ A L Sbjct: 548 YEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWFL 605 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +L N ++ + ++L++ + A +L + + +A EK ++ Sbjct: 606 KGNALGNLER--YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEI 663 Query: 290 NP--HPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGS 340 P H Y L N +G L+R + EI + E+ ++ Sbjct: 664 KPDFH------YAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER 717 Query: 341 IDQAHAKAMLAMKIAPR 357 ++A A A++I P Sbjct: 718 YEEAVAAFEKALEIKPD 734 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 19/272 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +Y A E L+I + + E A KAL+I PD Sbjct: 779 ALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER--YEEAVAAFEKALEIKPD 836 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + +++ A +LEN ++ + Sbjct: 837 FHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFH--EAWHNKGIALENLER--YEEAV 892 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 ++L++ + A +L + +A EK ++ P+ + + N Sbjct: 893 AAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIK--PDFHEAWHN--KGN 948 Query: 307 TVGKLKRALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 +G L+R I + + + ++ ++A A A++I P Sbjct: 949 ALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFH 1008 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 L I ++ + + AL PD Sbjct: 1009 EAWFLKGIALGKLERYEEAVAAYEKALEIKPD 1040 >gi|307263674|ref|ZP_07545283.1| hypothetical protein appser13_10860 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306870987|gb|EFN02722.1| hypothetical protein appser13_10860 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 409 Score = 56.9 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 29/226 (12%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLS 67 +++ +I +S V I ++ S +++ + + + F Sbjct: 2 LLLLASLIVG-PYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEVIISRFCR 60 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE- 126 ++ R + K + GLM ++ + A K+ S ++ +E ++ L++ Sbjct: 61 LSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEPVLNLIKA 117 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 + A A++ L + G N A A + + Sbjct: 118 AEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELARTRILVQQN 160 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P A +++++ + + K++K +N IL Sbjct: 161 KLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 203 >gi|320159768|ref|YP_004172992.1| hypothetical protein ANT_03580 [Anaerolinea thermophila UNI-1] gi|319993621|dbj|BAJ62392.1| hypothetical protein ANT_03580 [Anaerolinea thermophila UNI-1] Length = 617 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 10/237 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDIS 184 + + A + + A +G +L+ A++ AL Sbjct: 244 MGEALRFQGNAEQAIAYYSQAISVNPQFAPAYLGRARARLALGKELDKARQDLETALARD 303 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + ++ K A+ L Q + ++ +AR G++ A Sbjct: 304 PQLGEAYLELAHLELIEKNPEEALQLLAQADSLLPDSP----LVALARGEAYLALGEVDA 359 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + A + L + A L+ + + +A LE + + ++ + Sbjct: 360 ALEQAQRANTLDLTLLPAYRLLGAVLLEKGEVEQAVEPLET-YLLYETNDLEAYILASRA 418 Query: 305 ENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + LK R +N S E + ++ L D+A A ++ Sbjct: 419 YEGANRLPEALKALDRALALNSRSPEIYIRRGELYLAQEEFDKAIDDFKAAFRLKKT 475 >gi|49613818|emb|CAG77270.1| cellulose synthase protein C [Pectobacterium atrosepticum SCRI1043] Length = 1526 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 109/315 (34%), Gaps = 40/315 (12%) Query: 91 GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYL-------VYLLEVQIALAERQYNI 138 GL+ + A + A + + + V++ ++ E L + E AL + Sbjct: 681 GLVYLRAGDRVKALAQFQKALQADVNRLNSGKWEGLIQSTQYWTTITEGDNALKANNLPL 740 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + Q+ T +A+ L + + +AQ +AL + P +V Y Sbjct: 741 ARQKYQQARQMDNTNAYALIGLGDVAVASKNDAAAQPLYQQALQLEPGNDNALRGLVGIY 800 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----ARSLENADKGDMIASYHDAIESL 253 +A+ +LN ++ + R LL ++ + ++ + + Sbjct: 801 QRQSP-EKALAYLNSLPRSQQNTMRETLALLQLDILKQQADQLLEQQQWALAEEKYRQVN 859 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENT 307 + N I + A+ L + K + A+ ++++ P P A +Y + + Sbjct: 860 QQDPNDIWFAYRYAQVLRQRGKPQLADSVVQRA-TAVP-PASAEKNYVYSLYLSSTNRDE 917 Query: 308 VGKLKRALRL--EEINKE--------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L L + N + + ++ + ++ + G A A Sbjct: 918 QA-LAHLNTLPAAQWNDDMRDLSKRLTSQTTLAKAEAMRDAGDEIAAMAFLRQQPTDT-- 974 Query: 358 KEIFLLLAQIEQANS 372 I LLLA A Sbjct: 975 -RIDLLLADWALAQG 988 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 92/262 (35%), Gaps = 34/262 (12%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + ML P T + + SL + G ++ KAL +P+AP + A+ Y+ + Sbjct: 265 QKMLSDP-TYQAHLRSL-VQVENGGSHSTTLNELNKALAATPNAPELIGAIGLVYLREGD 322 Query: 204 WSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +A+ + + + + ++ + KGD +A+++ L N + Sbjct: 323 RKKALEQFQKALQVDMSRLHSGKWEGLIQNTQDWTTIAKGD------NALKANNLALNWL 376 Query: 261 MAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-AL 315 + A ++ ++ +P + + N +++ Sbjct: 377 RLLPLLLVTAPQAYSAE--------------TASPEQFLMEQVRLGEANNKDDIVRQSLY 422 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF----LLLAQIEQAN 371 RLE I + E + ++A+ G QA +AP + ++LA ++ + Sbjct: 423 RLELIAPNNPEVIAAKIRLAMRYGDQTQARQLLEKLKTLAPDSTAYRHASMILALTQEES 482 Query: 372 SHNTDKILYWTQSALHAMPDPL 393 K + + +A Sbjct: 483 RQQLQKARSLSTAGRYAEAKAQ 504 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 35/134 (26%), Gaps = 6/134 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + A L L + G+ +A + Sbjct: 946 TTLAKAEAMRDAGDEIAAMAFLRQQPTDTRIDLL----LADWALAQGEYTTALAEYQRIR 1001 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240 P P + ++ + A LN+ + N R + +++ N K Sbjct: 1002 TREPQNPDAQLGEIDAFIAQGQQDEARQRLNKLPVQAVDTLNGQRRVANAWQAVGNPQKS 1061 Query: 241 DMIASYHDAIESLK 254 I++ K Sbjct: 1062 -TALFRQLKIDAQK 1074 >gi|225446942|ref|XP_002267416.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1023 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 98/300 (32%), Gaps = 43/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + E L+ +L+ P + E GD+ +A+ +A Sbjct: 654 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 711 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN------- 236 P++ + A + E RA L + ++ ++ R L N Sbjct: 712 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNTGEERRL 771 Query: 237 ----------------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 G+ + LK C + I + + N Sbjct: 772 LGEGLKLFPSFFKLWLMLGQLEERFGNFEKAKEAYDSGLKHCPSCIPLWLSLSHLEEKMN 831 Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332 KA +L K NP PE+ + +E+ G K A L +E S ++ + Sbjct: 832 GLSKARAVLTMARKKNPQNPELWLA--AVRAESRHGNKKEADILMAKALQECPTSGILWA 889 Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 ++EM Q K++ A+K + +A++ + DK W A+ PD Sbjct: 890 -ASIEMVPRPQRKTKSLDALKKCDHDPHVIAAVAKLFWHDRK-VDKARTWLNRAVTLAPD 947 >gi|121605978|ref|YP_983307.1| HemY domain-containing protein [Polaromonas naphthalenivorans CJ2] gi|120594947|gb|ABM38386.1| HemY domain protein [Polaromonas naphthalenivorans CJ2] Length = 429 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 57/438 (13%), Positives = 120/438 (27%), Gaps = 63/438 (14%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + + + + V++ W S +++ +L L Sbjct: 1 MRAALWFMALFGIAVAVALFAGNNQAVVTVFWPPHRVDISLNLMVLLLVGLFMLLHLASR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ------- 113 S P ++ Y AL L + A A K Q Sbjct: 61 ALSALFSLPVEARRWRAQQKERAMYGALMDALAHLMAGRYIRASKSAQNALAQEKSLGVA 120 Query: 114 -------------HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 L +LL + A A + + ++ L++ LQ A R Sbjct: 121 TDTSGHPTGHSDSLASQLRSLSHLLVAESAQALQNKALRNQHLQLALQNSAAR------- 173 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTE-----------AVVQQYVLA--KEWSRA 207 + + R G A R+A + D S W+ + ++ ++ +A Sbjct: 174 HAQEVREGVQFRAARWALEDHDASAALDWLGQLPQGAARRTLALRMKLRAARYGRQTQQA 233 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--ASIC 265 + K+ ++ +LE ++ A L + ++ A Sbjct: 234 LETARLLAKHRAFSPTAAQSIVRGLALELLNEAHDPMQLQQAWARLDDSERAMPELAIHA 293 Query: 266 AAKSLISQNKKRKAEVILEKIWK--VNPHPEIAN--------IYTHLLSENTVGKLKRAL 315 A++ + A L +W+ + P E+ + + + L R Sbjct: 294 ASRLMGLHGDAALARSWLVPVWERMLEPRSELGDNLRIKLITVLEAGMDTLDAEWLARIE 353 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-------EIFLLLAQIE 368 + + + L +A A K LLA+ Sbjct: 354 AAHVSHPRDPKLQYLAGMACLSRQLWGKARQLLSQAAPALQDKLLHRKAWRALALLAE-- 411 Query: 369 QANSHNTDKILYWTQSAL 386 + + + A Sbjct: 412 --QREDEAAAIEAYKRAA 427 >gi|320103076|ref|YP_004178667.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319750358|gb|ADV62118.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 892 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 90/296 (30%), Gaps = 32/296 (10%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + L + R A +L+ + L + +G Sbjct: 131 AEGRARLDR--LADFAAARARELNRDNLAAIRLYRKLLETAPRSTAVLRRLSRINLVLGR 188 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 +N A Y+ +A+++ P+ + VV A + A T L + + LL Sbjct: 189 INEAVEYSRRAVELDPNDSESLQLVVLFLQRAGQLDEARTLLETVLAAPALRQDSASALL 248 Query: 230 IARSLENADKGDMIASYHDA---IESLKLCDNSIMASICAAKS----------------- 269 AR L + A ++ D+ ++ A+ Sbjct: 249 AARELGFLYVLQPERIHEGASLIARVVRALDDKAAGNLSRAELSRVLGNPPQTYLRFGET 308 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIA----NIYTHLLSENTVGKLKRALRLEEINKES- 324 L++ N+ +A + E+ P+ + A L + L+ L Sbjct: 309 LLNANRPNEAALAFERGLVYAPN-DSALVTGLARARLRQDRAAEALRLVEGLIA-QPNVV 366 Query: 325 --VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 E+ + S+ +G ++A A+ K +PR I LA + + Sbjct: 367 KFPETYRLQSEALEALGRGNEALARLEALAKASPRDVAIQAALADRLAREGRDQEA 422 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 81/297 (27%), Gaps = 38/297 (12%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 A S N YL + L + N A E L V L Sbjct: 281 KAAGNLSRAELSRVLGNPPQTYLRFGETLLNANRPNEAALAFERGLVYAPNDSALVTGLA 340 Query: 162 FESCRIGDLNSAQRYAT------------KALDISPDAPWV------TEAVVQQYVLAKE 203 R A R + + +A A ++ A Sbjct: 341 RARLRQDRAAEALRLVEGLIAQPNVVKFPETYRLQSEALEALGRGNEALARLEALAKASP 400 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 AI + + ++ +L D +I I++ ++ D Sbjct: 401 RDVAIQAALADRLAREGRDQEALAILTGLINGPIDPPALITLTDLLIKAERVTDLLK--- 457 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 L N A+ +L ++ PE A ++ + L Sbjct: 458 -IVGDLLARPNGVIAAQPLLA---RIVATPEFARLFLR----------QGIEGLSAEPPT 503 Query: 324 SVES-LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDK 377 ES V ++ IA ++ ++ L +K P ++ +L L +E + + Sbjct: 504 LPESCRVALASIARQLNDLELQLQLDRLELKRNPNRQTYLQLFFGLVEAGRHGDAAE 560 >gi|163748696|ref|ZP_02155949.1| hemY protein, putative [Shewanella benthica KT99] gi|161331806|gb|EDQ02610.1| hemY protein, putative [Shewanella benthica KT99] Length = 389 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 69/413 (16%), Positives = 134/413 (32%), Gaps = 51/413 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ Y ++ +C + T + T + L F L Sbjct: 1 MTRVLIYLGIVLFGLCISPFFEGMNGYLYFTIWDYEVETGVLFAVIALIVFYGLLQLTEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQ------- 112 F L+ + K K G +++A + A K M + Sbjct: 61 AIIFILNLLLSSRLLPEKWRKKAARKYTLVGALALAEEDWSTAEKAMIKGAEKGELPTLN 120 Query: 113 --------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 H + E L Q A E +A + + TR Sbjct: 121 LLAAARAAHHQNNAESRDKYL--QQAEQE---PLAIKA----VSTSRTRYL--------- 162 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLN---QKKKNA 218 + G+L+ A+ K +SP + + ++ Y +W A+ L +K++ Sbjct: 163 LQQGELDKARIELDK---LSPTSKSKQPVLKLALELYQAQADWH-ALKLLLPIIKKRQVL 218 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQN 274 E + +L +L + + + + + AS C L N Sbjct: 219 SEADYQHLTILTNNALLIQAQSNSEQELEKVWHWLSRAERKEPQYL-ASYCLG--LHKFN 275 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +K +A+ IL K K +I+ +LS V + ++ LE+ E + ++++K+ Sbjct: 276 RKTEAKKILMKQIKSGLCSDISVALAKILSPADVEERRQIFALEKKYAEELSFQILLAKL 335 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + QA P K +L L + + I + Q+A+ Sbjct: 336 HSQNKNYRQAMTYWKKVCHQRPNKANWLALGETHEHLGEQNGAIQSYRQAAVT 388 >gi|126669092|ref|ZP_01740023.1| hypothetical protein MELB17_15484 [Marinobacter sp. ELB17] gi|126626447|gb|EAZ97113.1| hypothetical protein MELB17_15484 [Marinobacter sp. ELB17] Length = 388 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 20/260 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYS------LYFESCRIGDLNSAQRYATKALDISPDA 187 + + A + +L P A YS L + G L+ A+ + + Sbjct: 83 GETDRAILIHQNLLDRPE--LPARYSPQVTLELALDYLNAGLLDRAEALLQQLMGDREYG 140 Query: 188 PWVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 ++ Y +EW +A L + + + + A L +S + + D Sbjct: 141 RSAATQLIDLYEREREWDKASQVAHTLTRGNADPAMF-KILAYLTCEKSEQALRQDDRWG 199 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHL 302 + A E+L+ + + ++ K L Q R+A + K+++ NP PE + L Sbjct: 200 AQRLAKEALEFDRSCVRGTLILMKLLTRQGSFREAGTMAIKVFEQNPDFGPEAIDQLMKL 259 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEI 360 E+ K +L ++ + + ++++ + A A +++ P Sbjct: 260 EREHG-DIGKLGRKLRKLYESYPSTSLLLALVESVERRSGRPAAIALLRGELEVRPSVRG 318 Query: 361 FLL---LAQIEQANSHNTDK 377 L +A E++ + N + Sbjct: 319 LLQLVEMAGYEKSMTTNEGR 338 >gi|84394673|ref|ZP_00993359.1| putative heat shock protein [Vibrio splendidus 12B01] gi|84374703|gb|EAP91664.1| putative heat shock protein [Vibrio splendidus 12B01] Length = 391 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 99/296 (33%), Gaps = 57/296 (19%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E +++ P +E Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVSGFLDRAEKIFEQLVEEPDHKEG 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + +V Y +EW++AI + N Sbjct: 143 AL----------------------------------QQLVAIYQQTREWNKAIHYGNILV 168 Query: 216 KNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ + RA + +++ G+ + ++L + ASI K ++ Sbjct: 169 KLGKKKMKMRATVAHFWCELAMQEQADGNRSKALQHFKKALSEDPKCVRASIALGKFHLA 228 Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKES 324 +K LE + + P +A Y L E + L+ NK Sbjct: 229 NEDYQKTIDCLESVLEQDIDFISEVLPTLAECYHKLGQE-----AQLVEFLKACIQNKAG 283 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQANSHNT 375 V + ++++++ + A + P + L LA+ E+ + ++ Sbjct: 284 VSAELMLAQLVAHHEDVGSAQELLTKQLVKNPTMKGFYRLIDYHLAEAEEGRAKDS 339 >gi|87201047|ref|YP_498304.1| sulfotransferase [Novosphingobium aromaticivorans DSM 12444] gi|87136728|gb|ABD27470.1| sulfotransferase [Novosphingobium aromaticivorans DSM 12444] Length = 677 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 14/191 (7%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---------YLLEV 127 +R +AL +IA+ LAR++ Q+ L LL+ Sbjct: 93 DQRRATAALQALVRLQPAIASGWFLLARQLRK-AGQEEDAWRADLSGIHASSRDGELLKA 151 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A+ + + + A L L+ A A+ L + R GD+ +A A +A+D++P Sbjct: 152 AAAMNDGETDAAEALLNARLERQADDAPALRLLGEIAWRRGDMTTALDRAARAVDLAPGF 211 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + +++ + S A+ ++ +R IL + G + Sbjct: 212 DLARDFLIRLLLQTNRLSEALDHAETLVRSPVPSPGHRLIL----ASVLVRLGHQERAAA 267 Query: 248 DAIESLKLCDN 258 E L + Sbjct: 268 IYRELLAERPD 278 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 81/274 (29%), Gaps = 26/274 (9%) Query: 100 IPLARKMHSYVSQQHTFH-------NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 R+M V Q+A A L+ ++++ Sbjct: 51 ARALRRMGRQREALDRLDALAKANPRVPAVLYELGQVAADLGDQRRATAALQALVRLQPA 110 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-AVVQQYVL--AKEWSRAIT 209 + L + + G A R D+S + +++ E A Sbjct: 111 IASGWFLLARQLRKAGQEEDAWR-----ADLSGIHASSRDGELLKAAAAMNDGETDAAEA 165 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 LN + + + A L +GDM + A ++ L +A + Sbjct: 166 LLNARLERQAD----DAPALRLLGEIAWRRGDMTTALDRAARAVDLAPGFDLARDFLIRL 221 Query: 270 LISQNKKRKAEVILEKIWKVN-PHP----EIANIYTHLLSENTVGKLKRALRLEEINKES 324 L+ N+ +A E + + P P +A++ L + + R L + Sbjct: 222 LLQTNRLSEALDHAETLVRSPVPSPGHRLILASVLVRLGHQERAAAIYR--ELLAERPDE 279 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + + +G D+A A+ P Sbjct: 280 PQVWQNLGHVLKTLGHQDEAVEAYRAAVSRQPTM 313 >gi|307717854|ref|YP_003873386.1| lipoprotein [Spirochaeta thermophila DSM 6192] gi|306531579|gb|ADN01113.1| putative lipoprotein [Spirochaeta thermophila DSM 6192] Length = 454 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 48/325 (14%), Positives = 98/325 (30%), Gaps = 45/325 (13%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + S + + LL V + L + A +L +L+ A+ Sbjct: 48 GRPEDAIRAFEEASARA--PEDPETRLLYVNLLLMAGKETEAEAELSKILEEYPDHVGAL 105 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI--------- 208 Y+L G +R + L + P A+ + + K+++RA Sbjct: 106 YTLALLEGARGREEEHRRLLERILVLDPHHTGARAALGELLLSKKQYARAEKEFTTVLEQ 165 Query: 209 -------------------------TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 L + + A ++ A AR+ + D+ Sbjct: 166 DPGDLVALVGLGNVYLRTRKAEKAAEVLTRAIQEAPDYP--FAYADRARAWQMLDE--PE 221 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + D +++L A+ LIS+ + +A L + ++P +A +Y Sbjct: 222 KAERDISRAIELDPGFSWHYYDRARILISEGQMDRALEDLSRAILLDPSNFLAYVY-RAR 280 Query: 304 SENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + G +K A R E+ + V + A P + Sbjct: 281 IYDGKGMMKEACSDYARALELRPDYYYIYVPYAVSLYHEKDYRGAAGYFDKGFDAYPSEY 340 Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384 +LLA + + + + Sbjct: 341 PLILLAATAYKRAGDDRMMRDYLTR 365 >gi|313499294|gb|ADR60660.1| Cellulose synthase subunit BcsC [Pseudomonas putida BIRD-1] Length = 1172 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 104/296 (35%), Gaps = 25/296 (8%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 L+ ++ Y L +S+A ++ A + + V + + + L+ V Sbjct: 371 RALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVRRMAPDNESAVRGLMRVYQ 430 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---------ESCRIGDLNSAQRYATKA 180 A + + A L+ + + ++ E+ + D ++A +A Sbjct: 431 AQSPGK---AQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEALQREDWSTASHVLGQA 487 Query: 181 LDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 ++PD PW+ + ++ E A L Q + + L + + Sbjct: 488 AALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQPRDPATRYAHGLFLESSDRDAL 547 Query: 238 D----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-KVNPH 292 + A++ + +L+ M ++ +A+ L +Q + +A +LE + Sbjct: 548 ALDSLRAVPQATWSADMHALEQRVQRRM-TLASAQQLQAQGRSVEATALLEAGLARGEGS 606 Query: 293 PE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P+ + + E+ + L ++ + V + A+ G++ QA Sbjct: 607 PDDLMLLADWAAARGEHGKARSYYQRVLVA-QPGRPDARLGVMESAVAEGNLQQAR 661 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 90/261 (34%), Gaps = 6/261 (2%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + ALA + A Q E+A+ L S GD+ +A+R + Sbjct: 353 ALLKKAEQALAAKDVRGARALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVR 412 Query: 182 DISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL--ENA 237 ++PD +++ Y + + L +++ R L R E Sbjct: 413 RMAPDNESAVRGLMRVYQAQSPGKAQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEAL 472 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + D + H ++ L + A SL Q + +A+ ++ + P + A Sbjct: 473 QREDWSTASHVLGQAAALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQP-RDPAT 531 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y H L + + AL ++ S + + + A A+ + A + Sbjct: 532 RYAHGLFLESSDRDALALDSLRAVPQATWSADMHALEQRVQRRMTLASAQQLQA-QGRSV 590 Query: 358 KEIFLLLAQIEQANSHNTDKI 378 + LL A + + D + Sbjct: 591 EATALLEAGLARGEGSPDDLM 611 >gi|257092899|ref|YP_003166540.1| tetratricopeptide repeat-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045423|gb|ACV34611.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 746 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 7/202 (3%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 A ++ LQ+ A +L R G ++ A +A+ + P + Sbjct: 546 RVAALQEYVASLQLEADWPSGNVNLGNLRLRQGRMDEAVAAFERAIALDPAFDGAYINLA 605 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + S A L + A L A L +G+ +A+ +E+ +L Sbjct: 606 DAWRQQGRESEAGNVLRRGLAVMP----RDAHLQHALGLSLTRQGEKVAALKAFVEAARL 661 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSE--NTVGKLK 312 ++ A ++ S K ++A +L K +P+ +I + E + L Sbjct: 662 APDNARYVYVHAIAVHSAGKLKEALTLLRAADKRHPNDLDILAALLSMSREAGDRQAALG 721 Query: 313 RALRLEEINKESVESLVIVSKI 334 A +L I ++ +V+++ Sbjct: 722 YAKQLAGILPDNANLKRLVAEL 743 >gi|302342034|ref|YP_003806563.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] gi|301638647|gb|ADK83969.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] Length = 584 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 22/259 (8%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + + +L+ A+ L + + GD SAQ A + +P +A Sbjct: 206 GRLDEARQCYQRLLRQSPQAAAAMVGLGRVALQGGDAASAQSLFQWAREANPAYGGAVDA 265 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + ++ +A L Q A L ++ D G + +L Sbjct: 266 LTELHLAQGRPEQAAEVLAQA---DDMPGGLGAHRLARQARLFHDLGQARQADQALQRAL 322 Query: 254 KLCDNSI--MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-ANIYTHLLSENTVGK 310 + AA+ ++ + KA L ++ + P + + L Sbjct: 323 AQDPALADGPEGLLAARCGLALGRPAKAVQALRRLARQTDQPRLKIEAWLMLAE------ 376 Query: 311 LKRALRLEEINKESVESLVI-VSKI-ALEMGSIDQA----HAKAMLAMKIAPRKEIFLLL 364 L + E E + +++ A G A HA A A R + L Sbjct: 377 ----AHLSQGRPEQAEEVFARMAQADAWPAGQRPFALHRLHAVAAAAYLRQGRPQAAAEL 432 Query: 365 AQIEQANSHNTDKILYWTQ 383 + + + + + L W Sbjct: 433 VAVSRLMAPDDAENLAWLD 451 >gi|254515365|ref|ZP_05127426.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma proteobacterium NOR5-3] gi|219677608|gb|EED33973.1| putative PEP-CTERM system TPR-repeat lipoprotein [gamma proteobacterium NOR5-3] Length = 926 Score = 56.9 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 102/321 (31%), Gaps = 44/321 (13%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + ++ + ++H + L L A+ + + + + + + A Sbjct: 353 GDASKTEELARNILKEHEMNIPALGLL--AMALSAQGLHAESAQAYQQIATLNPESTQAK 410 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-------------------- 197 +L + GD + A+ + P E +++ Sbjct: 411 VALGSQQMVAGDTEAGIEQLQAAVALDPSNAQARERLIEAHLAVGDLDAAAAAGEAYLEA 470 Query: 198 --------------YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + +++ A + + N + + + A ++ N D Sbjct: 471 APDTARSAVYLGRVRLQQEDYKGARELFEKAL-TLEPGNVSASGGMAALAVLNKDLDGAK 529 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYT 300 A++ A+E+ ++ S+ A L + + +L + NP P +A Sbjct: 530 AAFEQALEAN---PGDVLTSMNLAVVLEQTGDLQAMQAVLSAAMEANPGAVAPRLALARY 586 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKE 359 L + + +EE + + I++ L +G+ + A A +++ Sbjct: 587 ALSQNDADQAITLMAPVEENGEGDYQVHQILAGARLAVGNAEAARDNARRLLELRSNDPV 646 Query: 360 IFLLLAQIEQANSHNTDKILY 380 L+A++E AN + Sbjct: 647 ALALVARVEAANGRPEQAQRH 667 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 52/197 (26%), Gaps = 4/197 (2%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G+ ++A N L ++ + L + + L ++ Sbjct: 512 SGGMAALAVLNKDLDGAKAAFEQALEANPGDVLTSMNLAVVLEQTGDLQAMQAVLSAAME 571 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 +L + D + A + V + + + A Sbjct: 572 ANPGAVAPRLALARYALSQNDADQAITLMAPVEENGEGDYQVHQILAGARLAVGNAEAAR 631 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + E N + L + A G + +LKL S + Sbjct: 632 D----NARRLLELRSNDPVALALVARVEAANGRPEQAQRHIDAALKLQPQSSELRKMLVE 687 Query: 269 SLISQNKKRKAEVILEK 285 SLI Q K +A + K Sbjct: 688 SLIQQQKLEQAGEEIAK 704 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 43/292 (14%), Positives = 84/292 (28%), Gaps = 24/292 (8%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 + +A+ G ++ A ++ A + + + + L QI L + A Sbjct: 38 ARASEAIANGDLAAAELDVKTALQQNPENAAARS---------LYGQIYLRQINPGAAIG 88 Query: 142 KLEMML---QIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDISPDAPWVTEAVVQQ 197 + E L IP TR L + G+ A + D P A+ + Sbjct: 89 EFERSLGAADIPETRLA----LAKALVQAGESAELLSEYEIGAYASTADMPEFKAALARA 144 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y+ + + A N + L D + + Sbjct: 145 YLAQAQ----VDEARSALAAADAAEANDYVDLTRAVFTLQLDKDSYKAKELLQSIVNRSP 200 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRA 314 + A ++ + AE K NP+ + + T + K Sbjct: 201 ANAEAWSLLGFLATREDDRAAAEEYFAKASAANPYRLGDRLQLVTTQIRLGKAEDADKDL 260 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +LE++ E + ++ + G A + P LLL+ Sbjct: 261 AQLEKLIPNYPEVNFLRGQLYFDDGDYKNAIDAFSQVLTANPNHAGALLLSA 312 >gi|194451942|ref|YP_002047644.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205359078|ref|ZP_02666711.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194410246|gb|ACF70465.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205338979|gb|EDZ25743.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 1150 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIVQLQQAVSARQDDSEAVGALGQAYSQSGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|113866405|ref|YP_724894.1| O-linked N-acetylglucosamine transferase OGT [Ralstonia eutropha H16] gi|113525181|emb|CAJ91526.1| O-linked N-acetylglucosamine transferase OGT [Ralstonia eutropha H16] Length = 651 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 77/257 (29%), Gaps = 45/257 (17%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A A +ISP +P + + VL W A L Q+ R AIL Sbjct: 159 PQQALDSARLWKEISPTSPAAAQVLSTLLVLNGRWDDARPLLQQQLAAVPASQRGEAILQ 218 Query: 230 IARSLENADKGDMIASY--------------HDAIESLKLCDNSIMASICAAKSLIS--- 272 + + L A+ A+ + ++ A + Sbjct: 219 LQQQLSRTSDAAGAATLLQDLTKNDAKLPETQLALARAREVAGDEPGALAALDQALRLRP 278 Query: 273 --------------QNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313 + + +A IL++ +P H +A +Y L ++ + + Sbjct: 279 GYEAAALMAAELRAEKQPDEAVAILKRFLDKSPDSVNGHITLARLYL-LRNDMQSAR-QE 336 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRKE---IFLLLAQI 367 L ++ + + +L+ S +A + ++ P + LAQI Sbjct: 337 FETLRKVAPGDPRVPLALGLTSLQAKSYGEAEQYLKEYLQLVEKQPTANPDIAYQYLAQI 396 Query: 368 EQANSHNTDKILYWTQS 384 + + + W Sbjct: 397 AE-ERKDYAGAIRWLDR 412 >gi|198429852|ref|XP_002128772.1| PREDICTED: similar to PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Ciona intestinalis] Length = 937 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 115/334 (34%), Gaps = 46/334 (13%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SI+ AR M Y + ++ ++L + A E+ + + LE +LQ Sbjct: 546 SISHGAYECARAM--YAHALNLLPSKKSIWL---RAAYLEKNH-GTRDSLETLLQKAVAH 599 Query: 150 -PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P + D+++A+ A +P++ + A V+ E RA Sbjct: 600 CPKAEVLWLMG-AKSKWMANDISAARSILALAFQANPNSEDIWLAAVKLESENNEHDRAR 658 Query: 209 TFLNQKKKNAKEWNRNRA-------ILLIARSLENADK---------------------- 239 L + + NA + L+ + D+ Sbjct: 659 KLLAKARANACTARVMMKSIKLEWCLNLLDDARSLLDEATNKYPDFAKLWMMKGQIFEQV 718 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANI 298 G++ ++ L C +I I +K + KA +LEK NP+ PE+ Sbjct: 719 GEIQSAREAYTAGLGKCPRAIPLWILLSKLEQKKGTLTKARAVLEKARLKNPNCPELWLA 778 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APR 357 L ++ + + + +E S ++ S+ A+ + + Q K++ A+K Sbjct: 779 SIRLEWKSDIKNIAS-SLMARALQECPSSGLLWSE-AIFIEARPQRKTKSVDALKKCEHD 836 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +A++ + K W + D Sbjct: 837 SHVLLAVARLFWSERK-LTKAREWFLRTVKIDQD 869 >gi|152985242|ref|YP_001349258.1| TPR domain-containing protein [Pseudomonas aeruginosa PA7] gi|150960400|gb|ABR82425.1| TPR domain protein [Pseudomonas aeruginosa PA7] Length = 755 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 68/244 (27%), Gaps = 22/244 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPW--------VTEAVV----QQYVLAKEWSRAITFLNQ 213 IG + + A + I+P A++ + A W RAI Q Sbjct: 514 AIGAVAALLSPAERVARIAPSLSDPLRAVRLSAAYALLPAIAELGTHAAAWRRAIDEYEQ 573 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + R RA + + G E+L+ + A + + L + Sbjct: 574 AQ----LAQRERAEANLNLASLYQADGRPGLVQARLREALRRDADFAPARVALGQWLENA 629 Query: 274 NKKRKAEVILEKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + +A +L+ + P + A + + ++ + Sbjct: 630 GRDSEAIELLQDGIRRQPRSGLLRYAKGLALIRQGKREAARQALAEALAAEPDNPRHAYV 689 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ--SALHA 388 ++ E G +A + P + L + + A++ Sbjct: 690 LAVAWHEAGQPGKAIEVLRALLARRPAERPARLALAGYLRQAGDIAGAETALAELRAIN- 748 Query: 389 MPDP 392 DP Sbjct: 749 PDDP 752 >gi|197300669|ref|ZP_02660276.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197291266|gb|EDY30618.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 1150 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109 D ++A G+ ++ A AR + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|183599250|ref|ZP_02960743.1| hypothetical protein PROSTU_02709 [Providencia stuartii ATCC 25827] gi|188021480|gb|EDU59520.1| hypothetical protein PROSTU_02709 [Providencia stuartii ATCC 25827] Length = 389 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 108/337 (32%), Gaps = 55/337 (16%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S +F L + +A Y+ A + + Sbjct: 83 GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMAAGVYDRAENMFQQLTDEVD---- 138 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + +S ++++ + L +W++AI + Sbjct: 139 -----FKQS-------------------------ALQSLLAIFQLTSDWTKAIETATKLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K E R A + ++ D+ + ++ + N SI + I Q Sbjct: 169 KLGNEELRENIAHFYCELANQHLGSDDLDGALSLLNKAEQADKNCARVSIMKGRIFIEQE 228 Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 KA +L+++++ P + + Y + + + N +V + Sbjct: 229 HYDKAINVLKQVYEQDRELVAETLPLLYDCYQQIADMDAWEVY--LRQCVAGNTGAV-AE 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL-AQIEQANSHNTDKILYWTQSAL 386 + ++ I +E S + A + ++ P + + L+ +++A + L + + Sbjct: 286 LYLADIIVEKQSHEAAASYINDQIQRHPTMRLFYRLMDYHLKEAEEGRAKESLILLRKMV 345 Query: 387 -HAMP-DPLWISD-DGYLSSV--WLPLSPISKTLCYF 418 + P + G+ S W P ++ Sbjct: 346 GEQIRTKPDYRCHKCGFTSHSLYWH--CPSCRSWDTI 380 >gi|200389197|ref|ZP_03215809.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199606295|gb|EDZ04840.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 1143 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597 >gi|322617883|gb|EFY14776.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] Length = 1150 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109 D ++A G+ ++ A AR + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|207858854|ref|YP_002245505.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206710657|emb|CAR35015.1| Cellulose biosynthesis protein subunit C [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 1143 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597 >gi|205360321|ref|ZP_02682619.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350236|gb|EDZ36867.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 1150 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|205357600|ref|ZP_02571940.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205330678|gb|EDZ17442.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 1150 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|197249812|ref|YP_002148544.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213515|gb|ACH50912.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 1150 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101] gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 1421 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 86/269 (31%), Gaps = 33/269 (12%) Query: 73 FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA 132 K+ K +A+ ++ + K HN+ L+ L + Sbjct: 827 AREFEKKKQWK--EAMTQYQIAAMS---EKVEKCRQEAVN--VLHNQGLIKLQK------ 873 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 R + A E + + ++ ++G+L A KAL++ P Sbjct: 874 -RDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFKKALELEPKDLQTYN 932 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + YV E++ AI +Q K + + + + GD + D ++ Sbjct: 933 NLGAAYVELGEFNEAIELFSQALK----VDSQDSQIYQNLGVVRFKAGDKQGAIADYNQA 988 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHPEIANIY-----THLL 303 +KL N A + + A +L+ HP + + Y Sbjct: 989 IKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQL------HPRVVDAYTQRGIVRFE 1042 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVS 332 ++ G + ++N + E++ + Sbjct: 1043 VKDIEGAIADFNDAIKLNPKHPEAIYNRA 1071 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 17/206 (8%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + D+ A A+ ++P P L K+ ++ LN+ + Sbjct: 1036 RGIVR--FEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQL 1093 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ A + RS+ D GD + D +++L N+ A A + S Sbjct: 1094 HPKY--IDAYI--KRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDIL 1149 Query: 278 KAEVILEKIWKVNP--HPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330 A E ++NP H Y L + G ++ +IN E Sbjct: 1150 SAIADFENAIRLNPKYH----QAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNN 1205 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 G I A A++I P Sbjct: 1206 RGFTKFRRGDIPGAMKDFEAAIQINP 1231 Score = 44.2 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 8/148 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A E E +QI F R GD+ A + A+ I+P+ Sbjct: 1180 GDISGAMENFEAAIQINPNYAEGHNNRG--FTKFRRGDIPGAMKDFEAAIQINPNYAEAY 1237 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + ++ A+ + + ++ R+L GD + D + Sbjct: 1238 NNLGNSRFQTGDFQGAMRDFGETLRIHPKY----VPAYNNRALALLKLGDFSGATTDCYQ 1293 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKA 279 +LK+ +A +A Sbjct: 1294 ALKINPKYGLAYYNLGLIHTEMGDLEQA 1321 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 11/194 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A + A+ + P+ + AI + ++++ Sbjct: 1112 GDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDILSAIADFENAIRLNPKYHQ---- 1167 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + +GD+ + + ++++ N + + A E Sbjct: 1168 AYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIPGAMKDFEAAI 1227 Query: 288 KVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++N P A Y +L + + G ++ I+ + V + + L++G Sbjct: 1228 QIN--PNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHPKYVPAYNNRALALLKLGDFS 1285 Query: 343 QAHAKAMLAMKIAP 356 A A+KI P Sbjct: 1286 GATTDCYQALKINP 1299 >gi|205359552|ref|ZP_02830561.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344384|gb|EDZ31148.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 1150 Score = 56.5 bits (135), Expect = 9e-06, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAIAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|328770819|gb|EGF80860.1| hypothetical protein BATDEDRAFT_29905 [Batrachochytrium dendrobatidis JAM81] Length = 925 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 103/300 (34%), Gaps = 40/300 (13%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 Q A E + + E LE +LQ P + E GD+ +A+ + A Sbjct: 561 QAAFFE-KAHGTRESLEELLQRAVRYCPQAEVLWLMG-AKEKWLSGDIEAAKSILSNAFA 618 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR-------SLE 235 +P++ + A ++ V E+ RA L ++ A ++ R ++E Sbjct: 619 ANPNSEQIWLAAIKLEVETGEYHRARVLLASARERADTERVWMKSAVLERQQGRFQDAIE 678 Query: 236 NADKG-----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++G D+ + + ++LK S++ + A++ Sbjct: 679 LLNQGIQKFPLFSKLWVIKGQILDEDLEDIENARDNYAQALKRIPKSVVLWLLASRLEEK 738 Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 KA LEK +N PE + + +AL L + ++ S ++ Sbjct: 739 AGLPIKARATLEKARIMNAKVPEFWCEAIRVEVRAGNAPMAKAL-LAKSLQDCPTSGLLW 797 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 S+ L + A K + +A++ A DK W A+ PD Sbjct: 798 SEAILMEARPQRKARSADALKKCENDPMVVATIARLFWAERK-LDKARNWFNRAVKTNPD 856 >gi|291569289|dbj|BAI91561.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 1592 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 8/168 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + E +L+I T L S R GD+ +A++ TKAL++ P+ V + Sbjct: 37 DDARKACEQLLKIQPTSAVGFKILGDVSLRGGDIETAKQNYTKALELQPNWAEVYANLGS 96 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y +++W +A + E+ A + + + ++ L Sbjct: 97 LYARSQQWEQASAAYQKAISIKPEF----AGAYRNLAKVWTQLNRPLDAIRTQYKAYTLE 152 Query: 257 DNSIMASICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A A L+ Q +A+ + +N P +A Y +L Sbjct: 153 PQTFSAQEHLALGDGLMQQGMATEAQACYQNAINLN--PSLAAAYQNL 198 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 77/227 (33%), Gaps = 9/227 (3%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ A +LQ+ Y + + +L+ A+ KAL++ + + Sbjct: 506 DFDGAIALYGQLLQLNPNWAAGYYQIGELRNQQWNLSEAEAAYRKALELDKNLAAAYYGL 565 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + + W+ I L Q A + + L + G + + ++ Sbjct: 566 GRVLLRQERWADVIPVLGQAM--ALDASGADFELCKGFADALVQTGQLDEAIAFYQKATD 623 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVG 309 L ++ + +A +K +++P H +A++ L + Sbjct: 624 LAADNAEVWQKLGDLWRDKQAFDQAIEAYQKANELDPNLFWSHNGLADVLFKLERWSEA- 682 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + I + S +++ +++ +A A ++ P Sbjct: 683 -VEVYQKAISIKSDYSWSYNSLAEALVKLERWSEATTAYGEAARLNP 728 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 17/181 (9%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P P + + K+W +A++ + + + N A + +L+ G+M Sbjct: 281 RPVNPETVLQEAKAFCAIKKWEQAVSACQKALR--LDRNLAEAYKIQGNALQML--GEME 336 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 A+ ++L++ +++ KA ++ + +P A Y +L Sbjct: 337 AAVRSYNKALEVKPQFPEVHANLGSLYAQEDRLEKAVSCYQQA--IAQNPNFAGFYRNLA 394 Query: 304 SENTVGKLKR-------ALRLEEINKE--SVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +L R + + + E + + L G +DQA+ A+++ Sbjct: 395 K--VLERLGREGEASICLEKAYTLEPNKATPEDHLRLGNTRLGQGKLDQAYESYQRALEL 452 Query: 355 A 355 Sbjct: 453 N 453 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 74/262 (28%), Gaps = 41/262 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA--------VYSLYFESCRIGDLNSAQRYAT 178 + Q + A + AT A + L+ + A + Sbjct: 602 ADALVQTGQLDEAIAFYQK-----ATDLAADNAEVWQKLGDLWRDKQAFDQAIEAYQ--- 653 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 KA ++ P+ W + + WS A+ + +++ + +A +L + Sbjct: 654 KANELDPNLFWSHNGLADVLFKLERWSEAVEVYQKAISIKSDYS--WSYNSLAEALVKLE 711 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVI--------- 282 + + E+ +L +S + + R A + Sbjct: 712 RW--SEATTAYGEAARLNPEFPWSSYNLGEVSVRLQNWEEAVKGYRAAMAVQSDLPGIQQ 769 Query: 283 -LEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 L + ++ Y ++ + + + EI + E V ++ Sbjct: 770 KLADALRERAKGDLDEALGCYLQVMEQEP-DNVDTYHKAIEIKPDDSELYVKLADTLARQ 828 Query: 339 GSIDQAHAKAMLAMKIAPRKEI 360 +D A +A + P Sbjct: 829 TQLDGAIVFYQMAQDLDPDNRA 850 >gi|194469945|ref|ZP_03075929.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358577|ref|ZP_02657510.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194456309|gb|EDX45148.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333258|gb|EDZ20022.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 1150 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 260 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 319 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 320 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 379 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 380 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 439 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 440 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 499 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 500 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 559 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 560 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|254785193|ref|YP_003072621.1| peptidase, M48 family [Teredinibacter turnerae T7901] gi|237686301|gb|ACR13565.1| peptidase, M48 family [Teredinibacter turnerae T7901] Length = 486 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYL----VYLLEVQIALA-ERQYNIAHEKLE-MMLQIP 150 +H + +R + + Q + L L++ + L E+ + A E M Sbjct: 246 SHPVTESRVTEARLRAQQYPNKPPLPVEEYDLIKARAYLLHEKNHQTAVNMFESEMRGTQ 305 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R A Y L R G+ A + L PD + A Y + +++ A Sbjct: 306 FDRVAARYGLVLALTRNGETERATQEIAPLLAQEPDNVYFQIAKADIYAESGDFAAARKV 365 Query: 211 LNQKKKNAKEWN 222 L K + Sbjct: 366 LEANLKKQPNSH 377 >gi|90413046|ref|ZP_01221043.1| putative N-acetylglucosaminyl transferase [Photobacterium profundum 3TCK] gi|90325889|gb|EAS42335.1| putative N-acetylglucosaminyl transferase [Photobacterium profundum 3TCK] Length = 323 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 103/305 (33%), Gaps = 29/305 (9%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + G L+ A++ + LD PD Sbjct: 17 GEVDRAIRIHQNLIARPNLTIDQRNLALQQLAKDYMAAGFLDRAEKIFEQLLD-EPDHRK 75 Query: 190 -VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYH 247 + ++ Y +EW +AI +Q K K ++ A ++ + + Sbjct: 76 GALQQLLSIYQQTREWEKAIEMASQLVKMGKPKLKHDIAHYWCELAMLEIGAQNQDKAKQ 135 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTH 301 ++L N + AS+ A+ LI + + A LE++ + P + Y Sbjct: 136 CLKKALSADKNCVRASLTMARILIKGGEYKAASKQLERVTEQEVDFVGEALPLLLQCYEA 195 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EI 360 +E+ G LK ++ S L++ +I G+I A + P Sbjct: 196 TNNES--GWLKYLQHCVDMKAGSTAELMLADEIYKREGAI-LAQTFMTRQLTKNPTMKGF 252 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPD-----PLWISDDGYLSSV---WLPLSPIS 412 + L+ + + S H + + P + ++ W P Sbjct: 253 YQLMDY--HLDEAEEGRAKESLTSLRHLVGEQLKMKPHYRCHKCGFATHSLYWQ--CPSC 308 Query: 413 KTLCY 417 K Sbjct: 309 KGWGT 313 >gi|74318583|ref|YP_316323.1| putative porphyrin biosynthesis protein [Thiobacillus denitrificans ATCC 25259] gi|74058078|gb|AAZ98518.1| putative protein porphyrin biosynthesis [Thiobacillus denitrificans ATCC 25259] Length = 390 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 73/218 (33%), Gaps = 10/218 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-----QKKKNAK 219 D +A A +I+P + ++ + +W L+ + Sbjct: 162 LETKDAAAALVAINHAKEIAPQHTALLRLELRARQMTGQWDEVDRLLDLLMRTNALEPGV 221 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R D ++ + K+ A+ A++ + + A Sbjct: 222 AAQNRRMAYAENLKRRAEDDRALLEYWKKVPSEFKVDPWVARAA---ARAFLQRGGDDTA 278 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +LE + E+ +Y L + + +++RA + + L+ ++++ Sbjct: 279 LDVLEAALDREWNEELVALYGELRASDPRRQIERAEKWLHAHPRDARLLLALAQLCSVQQ 338 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIE--QANSHNT 375 +A + ++ IAP E + +A+++ + + Sbjct: 339 LWGKAQSYLEASLAIAPTAEGHIRMAELKTQSGQTGDA 376 >gi|322613991|gb|EFY10927.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322625502|gb|EFY22328.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629967|gb|EFY26740.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632144|gb|EFY28895.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636506|gb|EFY33213.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643140|gb|EFY39714.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644639|gb|EFY41175.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651337|gb|EFY47721.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652747|gb|EFY49086.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659048|gb|EFY55300.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663250|gb|EFY59454.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668736|gb|EFY64889.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674460|gb|EFY70553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678333|gb|EFY74394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682409|gb|EFY78430.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684123|gb|EFY80129.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192321|gb|EFZ77553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196251|gb|EFZ81403.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201399|gb|EFZ86465.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206491|gb|EFZ91452.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212083|gb|EFZ96910.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216988|gb|EGA01711.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220353|gb|EGA04807.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224400|gb|EGA08689.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228330|gb|EGA12461.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233403|gb|EGA17496.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237136|gb|EGA21203.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243649|gb|EGA27665.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246107|gb|EGA30094.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250887|gb|EGA34765.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257620|gb|EGA41306.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261827|gb|EGA45394.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266116|gb|EGA49607.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268660|gb|EGA52127.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 1180 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109 D ++A G+ ++ A AR + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|16766902|ref|NP_462517.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161616676|ref|YP_001590641.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197261926|ref|ZP_03162000.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|238910356|ref|ZP_04654193.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|269849704|sp|Q8ZLB8|BCSC_SALTY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|16422179|gb|AAL22476.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|19171165|emb|CAC86196.1| putative cellulose synthase operon C protein [Salmonella typhimurium LT2] gi|161366040|gb|ABX69808.1| hypothetical protein SPAB_04493 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197240181|gb|EDY22801.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|261248769|emb|CBG26619.1| putative polysaccharide biosynthesis protein subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995858|gb|ACY90743.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312914640|dbj|BAJ38614.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226668|gb|EFX51718.1| Cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|332990467|gb|AEF09450.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 1180 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|326625359|gb|EGE31704.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 1143 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597 >gi|320088037|emb|CBY97799.1| Cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 1180 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAIAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|198241977|ref|YP_002217576.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197936493|gb|ACH73826.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 1180 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|205354768|ref|YP_002228569.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205274549|emb|CAR39597.1| putative polysaccharide biosynthesis protein subunit C [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629909|gb|EGE36252.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 1161 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|194735245|ref|YP_002116553.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710747|gb|ACF89968.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] Length = 1172 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109 D ++A G+ ++ A AR + + Sbjct: 282 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 341 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 342 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 401 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 402 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 461 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 462 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 521 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 522 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 581 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 582 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 626 >gi|238852700|ref|ZP_04643110.1| TPR repeat protein [Lactobacillus gasseri 202-4] gi|238834846|gb|EEQ27073.1| TPR repeat protein [Lactobacillus gasseri 202-4] Length = 419 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 18/257 (7%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A++ Sbjct: 62 FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 121 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIA 231 +A ++P+ + + + L+ ++ A+ + K K + R +A Sbjct: 122 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGEVVLSQRIAACLA 181 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + E + + I S+ + I S+ A A ++S + A L+++ + P Sbjct: 182 KLGEYEEAANEIKSHENYILSID-------ALYEAGLIMLSAGDNKAAIKYLDQVIETQP 234 Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 235 DYVNAYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAER 292 Query: 347 KAMLAMKIAPRKEIFLL 363 ++IAP L Sbjct: 293 LLKKGLEIAPDNSDLRL 309 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 I AR+ + E + ++ Y A + + T Sbjct: 114 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 166 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211 + S RI + +A + +A+ + + A + AI +L Sbjct: 167 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENYILSIDALYEAGLIMLSAGDNKAAIKYL 226 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +Q + ++ +L A + E+ ++ +++ + + +L + AK+ Sbjct: 227 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 282 Query: 272 SQNKKRKAEVILEKIWKVNP 291 + N+ +AE +L+K ++ P Sbjct: 283 NLNQLDEAERLLKKGLEIAP 302 >gi|300361579|ref|ZP_07057756.1| tetratricopeptide repeat family protein [Lactobacillus gasseri JV-V03] gi|300354198|gb|EFJ70069.1| tetratricopeptide repeat family protein [Lactobacillus gasseri JV-V03] Length = 419 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 10/253 (3%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A++ Sbjct: 62 FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 121 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A ++P+ + + + L+ ++ A+ + K K + ++L R Sbjct: 122 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGE---VVLSQRIAA 178 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 K + I+S + SI A A ++S + A L+++ + P Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYLDQVIETQPDYVN 238 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296 Query: 351 AMKIAPRKEIFLL 363 ++IAP L Sbjct: 297 GLEIAPDNSDLRL 309 Score = 43.4 bits (101), Expect = 0.097, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 I AR+ + E + ++ Y A + + T Sbjct: 114 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 166 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211 + S RI + +A + +A+ + + A + AI +L Sbjct: 167 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYL 226 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +Q + ++ +L A + E+ ++ +++ + + +L + AK+ Sbjct: 227 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 282 Query: 272 SQNKKRKAEVILEKIWKVNP 291 + N+ +AE +L+K ++ P Sbjct: 283 NLNQLDEAERLLKKGLEIAP 302 >gi|195873799|ref|ZP_02698986.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632376|gb|EDX50860.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 1180 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|161936207|ref|YP_152593.2| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 1180 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|197364444|ref|YP_002144081.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129775|gb|AAV79281.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095921|emb|CAR61500.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 1143 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 253 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 312 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 313 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 372 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 373 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 432 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 433 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 492 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 493 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 552 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 553 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 597 >gi|254515150|ref|ZP_05127211.1| TPR domain protein [gamma proteobacterium NOR5-3] gi|219677393|gb|EED33758.1| TPR domain protein [gamma proteobacterium NOR5-3] Length = 402 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 109/340 (32%), Gaps = 46/340 (13%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL-EMMLQIPATRE 154 + A ++H + + + +L + ++ + A + L ++M + R+ Sbjct: 83 GEVDRAIRIHQNLLARPNLPRTQMHIAHLELARDYISAGLLDRAEKLLLDLMAESEEQRD 142 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + L + A +A + P ++++ A Sbjct: 143 VSRQYLVEIYRSESEWERAI---EEARALLPR-----RSLLRGETQA------------P 182 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + + A +LE A++G + ++L++ AS+ + + Sbjct: 183 QLSGQPMAVQLAHFYCESALELAEEGKPDEARKQLQQALRIDPACARASLELGRFEGTAG 242 Query: 275 KKRKAEVILEKIWKVNPH--------PEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 R A L ++ V H P + Y L E + + L E Sbjct: 243 NHRLAIDALTRV--VEQHVEFLPEAIPALRECYAALGEEKALS-----VYLRRCLDEHPS 295 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQ----ANSHNTDKILY 380 + ++++ A LA ++ AP L L +++Q S ++ +L Sbjct: 296 TPLMIAVADDIHRDEGHEAAHEFLAERLAQAPSLRGLLRLIRMQQEDTPGVSGDSLSMLS 355 Query: 381 WTQSALHAMPDPLWISD-DGYLSSVWLPLSPISKTLCYFE 419 L + P + D G+ + L P K F Sbjct: 356 VLLHRLIEVR-PAYRCDHCGFSARHLLWFCPGCKYWGTFR 394 >gi|149177100|ref|ZP_01855707.1| O-GlcNAc transferase [Planctomyces maris DSM 8797] gi|148843992|gb|EDL58348.1| O-GlcNAc transferase [Planctomyces maris DSM 8797] Length = 665 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 60/205 (29%), Gaps = 43/205 (20%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A A LQ A++ L + + + A RY AL +PDAP Sbjct: 442 YEAREDNKKAFNHYFQSLQAKPQNADALFGLGNLARKQKNYEEALRYYQLALKFNPDAPG 501 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA---------------KEWNRNRAILLIARSL 234 + E + Y+ + + A + +K K + +AI +L Sbjct: 502 IRETLGNLYLELGDMTNAQHQFDLSRKQGLLDPANEFNLGLMAAKNADLQKAIKHYESAL 561 Query: 235 ENADKGDMIASYHDAIE----------------------------SLKLCDNSIMASICA 266 + D + I+ ++K + A Sbjct: 562 QILDSTKKPDLHRQVIQELTFTYNMRGTTLQKKQDHEQAEYYFRLAMKTSPDFAPAYFNL 621 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 +SL K + A +L+ + P Sbjct: 622 GESLYRLGKTQAAISVLQTALTLVP 646 >gi|83646050|ref|YP_434485.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396] gi|83634093|gb|ABC30060.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396] Length = 605 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 81/264 (30%), Gaps = 11/264 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 V L + + + A + L ++ + + + L +A KAL Sbjct: 188 VKLNLAEQYVRNGESGKAIKLLSPVIDVSSDNAVGLVLLANAYVASQSPEAAIPLFQKAL 247 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +SP P A+ A + ++ NQ K +W + R+L A K D Sbjct: 248 KLSPQQPAPLLALGIAQRDADQLDNSLNSFNQLLKLKPDW----GLAYFQRALTYAKKDD 303 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIA 296 + D +LK ++ A K AE + + + K + P + Sbjct: 304 HDKAVSDYQSALKDKALPENLAVQAGDYFAQSGKHELAESVYKDLMKRSETPFPYYQRLG 363 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++Y L + L + ++ +S + A +K+AP Sbjct: 364 SLYQ--LQNDASKAKAVYSDLLKTYPDNPQSYLYAGSFHAFTRDYAAAADLFEKGLKLAP 421 Query: 357 RKEIFLLLAQIEQANSHNTDKILY 380 + + DK Sbjct: 422 DSSSLRMAKAVALKQLGTLDKAQQ 445 >gi|87311142|ref|ZP_01093266.1| hypothetical protein DSM3645_19021 [Blastopirellula marina DSM 3645] gi|87286233|gb|EAQ78143.1| hypothetical protein DSM3645_19021 [Blastopirellula marina DSM 3645] Length = 946 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 24/252 (9%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA----L 181 L + + A + E +++ + +Y + IGD + +A Sbjct: 704 AAYAYLQRKSNSSARKFAEKAIELDPSHPLGLYVMARLFLSIGDAQETLKLLEQATGDRF 763 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 D P A + K++ AI + K A L+ L+ D D Sbjct: 764 DRRPVALLA-----GLRLKQKDYQSAIELYERGAKAEPASEEWTAALVRVHLLQKDD--D 816 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + + + K D + A L +++ R A E+ +++ ++A+ H Sbjct: 817 ALLKLLPILAAQKHHD--VAIRKKLATLLAARDDWRGAARWSEEAFQI----DVADAQAH 870 Query: 302 LLSENTVG----KLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ L A L ++ + V+ + ++ + + A +K Sbjct: 871 EINGRAEQELDHPLAAARELAVAFRLSPDRVDWGIAAAEALIAVSDEAAAREILEAVLKH 930 Query: 355 APRKEIFLLLAQ 366 +P L + Sbjct: 931 SPSSAAAQQLLE 942 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 43/224 (19%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFAV 157 ARK + H L + ++ L+ + LE P + Sbjct: 717 ARKFAEKAIELDPSH--PLGLYVMARLFLSIGDAQETLKLLEQATGDRFDRRPVALLAGL 774 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKK 215 + D SA + P + T A+V+ ++L K+ + L + Sbjct: 775 R------LKQKDYQSAIELYERGAKAEPASEEWTAALVRVHLLQKDDDALLKLLPILAAQ 828 Query: 216 KNAKEWNRNRAILLIAR----------------------------SLENADKGDMIASYH 247 K+ R + L+A + +A+ Sbjct: 829 KHHDVAIRKKLATLLAARDDWRGAARWSEEAFQIDVADAQAHEINGRAEQELDHPLAAAR 888 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + +L + + I AA++LI+ + + A ILE + K +P Sbjct: 889 ELAVAFRLSPDRVDWGIAAAEALIAVSDEAAAREILEAVLKHSP 932 Score = 36.8 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 2/102 (1%) Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y +L ++ K A + E++ L +++++ L +G + A Sbjct: 704 AAYAYLQRKSNSSARKFAEKAIELDPSHPLGLYVMARLFLSIGDAQETLKLLEQATGDRF 763 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPLWISD 397 + LLA + + + + + A W + Sbjct: 764 DRRPVALLAGL-RLKQKDYQSAIELYERGAKAEPASEEWTAA 804 >gi|300865169|ref|ZP_07109993.1| hypothetical protein OSCI_1490029 [Oscillatoria sp. PCC 6506] gi|300336859|emb|CBN55143.1| hypothetical protein OSCI_1490029 [Oscillatoria sp. PCC 6506] Length = 313 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 78/242 (32%), Gaps = 36/242 (14%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E L L + ++ L E + + A + LQ A L G L A+++ Sbjct: 6 EVLDLLRQAEVDLNEGKLDRAIASCKQALQNEPNSATACKILGKALQTQGQLEEAKQWYA 65 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 KA+ + P+ V + Y ++W AI Q ++ A + + Sbjct: 66 KAIALDPNLADVHANLGSLYANLEQWPEAIASYQQALTLQPKF----AGVYRNLARLFEQ 121 Query: 239 KGDMIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G +L L + + + A SL++QNK +A Sbjct: 122 IGKPEEGADFWYIALMLEPDFTGETFLHVASSLMAQNKVERAV----------------I 165 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + +N E+ +++I + D A A A+++ P Sbjct: 166 CYLRTI---------------YLNPSCYEAYYKLAEIETSLEQWDDAIAHYRKAIQLQPD 210 Query: 358 KE 359 Sbjct: 211 IS 212 >gi|227823339|ref|YP_002827311.1| adenylate cyclase 3 [Sinorhizobium fredii NGR234] gi|227342340|gb|ACP26558.1| adenylate cyclase 3 [Sinorhizobium fredii NGR234] Length = 635 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 80/225 (35%), Gaps = 17/225 (7%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAKEWNRNRAILL 229 A+R KA+++ + + + ++W + + A + N A Sbjct: 368 ARRMFLKAVELDANYARAYAGIAECECAIRDWHEKDFPLESIFDMSAKALALDPNLAEAH 427 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +R L G + + ++L L + A++ + L +Q + ++A ++ ++ Sbjct: 428 ASRGLALTHNGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQGRFQEAVQFFKRAAEI 487 Query: 290 NP-------HPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALE 337 P H + N Y L ++ + ++RA E + E+ + Sbjct: 488 RPDDYFSPIH--LLNCYLSLGVDSERQRWARIGIERAKAALERHPENASPAHRGALALAH 545 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 +G D+A A A+ I P + A + ++ L Sbjct: 546 LGEGDRAKEWAARALAIDPDDIVAQYNAACVHSLLGENERALDLL 590 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 13/162 (8%) Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 Q A + + P+ E +Y + + G A ++ +A +I PD + Sbjct: 437 NGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQ--GRFQEAVQFFKRAAEIRPDDYFS 494 Query: 191 TEAVVQQY------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 ++ Y + W A + + K A E + A +L A G+ Sbjct: 495 PIHLLNCYLSLGVDSERQRW--ARIGIERA-KAALERHPENASPAHRGALALAHLGEGDR 551 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + A +L + + I+A AA + +A +LE + Sbjct: 552 AKEWAARALAIDPDDIVAQYNAACVHSLLGENERALDLLEAV 593 >gi|322419884|ref|YP_004199107.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320126271|gb|ADW13831.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 263 Score = 56.5 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 63/200 (31%), Gaps = 12/200 (6%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GY L A + A + + L L + ++ A Sbjct: 41 GYFYLGEAY--SEAGQVDDAIAALKKGLELAPQDVDGLTAL--GDVYFESGKHKDALACY 96 Query: 144 EMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 M ++ L + + D A + AL++ P + A+ Y Sbjct: 97 RKMTELQPKDCDGYVSMGLVYNAMERTDD--ALKAFEMALELDPANVFALNAMGDLYYGL 154 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + +AI ++ E + A D D+ A+ + +E+++L + M Sbjct: 155 GDNEKAIAAYHK----GIEIDPTDATARFNLGELYYDMDDLEAAERETLEAIRLDPDFTM 210 Query: 262 ASICAAKSLISQNKKRKAEV 281 + + I Q++ +A Sbjct: 211 SYLTLGNICIDQDRTAEAIK 230 >gi|320352459|ref|YP_004193798.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032] gi|320120961|gb|ADW16507.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus propionicus DSM 2032] Length = 758 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 55/186 (29%), Gaps = 9/186 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREF 155 A+K + ++ L + L ++Y A + + Sbjct: 420 GEFETAKK--EAATALKINPRDFQAALTLAKGVLFSKEYETAEKMFSELHAKVPDNVEVL 477 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 L + + + A++ K L + PD ++Q + A+ + Q + Sbjct: 478 GSLGLTYLAMKQEA--KAKQTFEKLLAVQPDNAKAFSFLLQLAQKSGAQKEALIKMTQAQ 535 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + A L I + + ++ +L ++ +A L Q K Sbjct: 536 IDKAP---KSAGLQILLANLFLSAQQPDKALELYSKAQELDPDNPQPYAMSALILTRQGK 592 Query: 276 KRKAEV 281 +A Sbjct: 593 TDQAIA 598 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 71/189 (37%), Gaps = 7/189 (3%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 AQ++ + L +PD ++ ++ AI +++ A +R AI Sbjct: 116 KEDAQKHIDEVLVQAPDNKDALALQANLELVDGKFDAAIATVDKAIAGAPNEDRFYAI-- 173 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + K A+ + +++L+L + A + + + KA+ LEK+ Sbjct: 174 --KGRALSAKQQFPAAENAFLKALELDGKKLANHATLAAFYVERKELSKAKASLEKMAAA 231 Query: 290 NP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P P + L+ N + + +++ ++ + ++ + G +QA Sbjct: 232 FPDSSQPYLQMASIELMENNPDAAEQHLTQALKVDPKNSKLKTAIADFYSKKGKFEQAEQ 291 Query: 347 KAMLAMKIA 355 A++ Sbjct: 292 LYKEAIQDT 300 >gi|282852067|ref|ZP_06261425.1| tetratricopeptide repeat protein [Lactobacillus gasseri 224-1] gi|311110807|ref|ZP_07712204.1| putative O-linked transferase [Lactobacillus gasseri MV-22] gi|282556827|gb|EFB62431.1| tetratricopeptide repeat protein [Lactobacillus gasseri 224-1] gi|311065961|gb|EFQ46301.1| putative O-linked transferase [Lactobacillus gasseri MV-22] Length = 419 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 10/253 (3%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 F E L + +I L + + + L + ++ L G + +A++ Sbjct: 62 FPREDLFKVYLAEILLNDGDEDDGLQLLYDVKPESDAYIESLLDLADYYQSNGLIETARQ 121 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A ++P+ + + + L+ ++ A+ + K K + ++L R Sbjct: 122 KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKTFGE---VVLSQRIAA 178 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 K + I+S + SI A A ++S + A L+++ + P Sbjct: 179 CLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYLDQVIETQPDYVN 238 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +P +A Y +N L+ A N+ + +K A + +D+A Sbjct: 239 AYPLLAQAYAA--EDNNEEVLRTAQTGLSYNELDEVLYSLGAKAAANLNQLDEAERLLKK 296 Query: 351 AMKIAPRKEIFLL 363 ++IAP L Sbjct: 297 GLEIAPDNSDLRL 309 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 17/200 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 I AR+ + E + ++ Y A + + T Sbjct: 114 GLIETARQ--KLLEAHKLAPEEDAINFGLAELDYLSGDYGEALGLYRELAKENKT----- 166 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVVQQ---YVLAKEWSRAITFL 211 + S RI + +A + +A+ + + A + AI +L Sbjct: 167 FGEVVLSQRIAACLAKLGEYEEAANEIKSHENDILSIDALYEAGLIMLSAGDNKAAIKYL 226 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +Q + ++ +L A + E+ ++ +++ + + +L + AK+ Sbjct: 227 DQVIETQPDYVNAYPLLAQAYAAEDNNE-EVLRTAQTGLSYNELDEVLYS---LGAKAAA 282 Query: 272 SQNKKRKAEVILEKIWKVNP 291 + N+ +AE +L+K ++ P Sbjct: 283 NLNQLDEAERLLKKGLEIAP 302 >gi|294788409|ref|ZP_06753652.1| tetratricopeptide repeat protein [Simonsiella muelleri ATCC 29453] gi|294483840|gb|EFG31524.1| tetratricopeptide repeat protein [Simonsiella muelleri ATCC 29453] Length = 389 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 44/344 (12%), Positives = 103/344 (29%), Gaps = 43/344 (12%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR + + QQ ++ L ++ + + A + +L P T Sbjct: 57 GKAARNLAEVIDQQQGSYDLNLTL---GKLYRQRGENDKAIAMHKTLLNSPDT--VGEKH 111 Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 +Y L G ++ A++ + L A E ++ Y ++W +AI Sbjct: 112 ERVLYELGLNYQSAGLVDRAEQIFIE-LQKGNMAKQANEVLLNIYQQDRDWEKAIATAQL 170 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + + A + + + +L A++ Q Sbjct: 171 LSHDNQTYQFEIAQFYCEMAQAVLFQSHFDEAREYVQAALNANPKCTRANMILGDIEQKQ 230 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKR----ALRLEEINKESVE 326 A I K N + Y ++ E + + + L K Sbjct: 231 GNFGAAIAAYSAIEKQN------HAYLSMVGERLYDAYDAMSKPEDGLNVLIGYAKTFPA 284 Query: 327 SLV--IVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQANSHNTDKIL 379 + ++ + +L + ++A+ A+ +++ P ++ L ++ + + D + Sbjct: 285 LDLINVIYEKSLLLHGEEKANQIAVELVRLKPDLNGMYRLLGLQMSDLNPQWKADADMMR 344 Query: 380 YWTQSALHAMPDPLWI--SDDGYLSSV---WLPLSPISKTLCYF 418 L W+ + + S W P F Sbjct: 345 GVMGRQLQ----KSWMFRCRNCHFKSQVYFWH--CPACNKWETF 382 >gi|330965739|gb|EGH65999.1| cellulose synthase operon protein C [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1298 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 79/250 (31%), Gaps = 51/250 (20%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221 + G L++AQ + L P ++ + A+ L+ ++ + Sbjct: 399 QAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQAKLGDS 458 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R +A+ + +GD+ A+ +++K +++ A+ + ++ KA Sbjct: 459 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 518 Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302 +++++ K P P++ + + Sbjct: 519 LIDELLKAQPNDIDALYTGALLSVEMGQWQDAQTTFARIPVDQRTPDMKALADEITMTVQ 578 Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L RL+ + S E + ++ ++ G + A A+ Sbjct: 579 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGEPARGRDMARAAIAQ 638 Query: 355 APRKEIFLLL 364 AP L+L Sbjct: 639 APVPSADLML 648 >gi|257457422|ref|ZP_05622592.1| putative TPR domain protein [Treponema vincentii ATCC 35580] gi|257445151|gb|EEV20224.1| putative TPR domain protein [Treponema vincentii ATCC 35580] Length = 1044 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 92/327 (28%), Gaps = 60/327 (18%) Query: 98 HNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATR 153 N A S H + L L + + A E + + P Sbjct: 126 GNYDEAADYFSRAIEVKPDHAHAYDRLGNL-----YVLTGDTDKAIEVYKQGLRVDPNHP 180 Query: 154 EFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L + R A Y AL I+P W E ++ + + L Sbjct: 181 YLNFHLAGLLRQEKR---YEEAIVYYNSALRINP--AW-GEVLLGIAAAYLQLDKLDDAL 234 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 N ++ A + K + + ++L + A++ + L Sbjct: 235 NT-YRSLLRVTGENAPIYTELGYLFEKKQLLQEAEQYYYDALAIDFGFAPAALALTRLLE 293 Query: 272 SQNKKRKAEVILEKIWKVNP-----H-------------PEIANIY-----THLLSENTV 308 ++ + +A IL + P H + A Y N++ Sbjct: 294 NKQQYNEALPILLAA-ETAPVNADNHALRLKAIQMCMYAKDYAKAYEIFGRLDAEHSNSL 352 Query: 309 GKLKRALRLEEI-----------------NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 LK +L + ++E +++ L ++A + L Sbjct: 353 SALKLRGQLYALTGESEQAEETFKQILKIAPAAIEFRQELAEQYLLAHKYEEAKEQLNLF 412 Query: 352 MKIAPR-KEIFLLLAQIEQANSHNTDK 377 +K P + L + E+ ++ Sbjct: 413 LKQRPTDISALMALGRTEELLNNPQAA 439 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 7/192 (3%) Query: 90 TGLMSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 L++ + L R + +Y+ + + L +I +Y+ A E L+ Sbjct: 47 ESLLARIYGDEGDLERSLAAYLRLYEREPDNVDLMLSLGRIYRHLGRYDAALEILKKAED 106 Query: 149 IP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 I T E +Y++ R+G+ + A Y ++A+++ PD + + YVL + +A Sbjct: 107 IGGDTDEI-LYNIAKTYKRMGNYDEAADYFSRAIEVKPDHAHAYDRLGNLYVLTGDTDKA 165 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I K + N L + + + +L++ + A Sbjct: 166 IEV----YKQGLRVDPNHPYLNFHLAGLLRQEKRYEEAIVYYNSALRINPAWGEVLLGIA 221 Query: 268 KSLISQNKKRKA 279 + + +K A Sbjct: 222 AAYLQLDKLDDA 233 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 60/179 (33%), Gaps = 13/179 (7%) Query: 188 PWVTEAVVQQYVLA---KEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMI 243 + + ++ A +++ A L K + ++ + + D+GD+ Sbjct: 2 SESLDFIFERANSALITQDFEYAEQLLTNVLKKHPDILPNDKTKIESLLARIYGDEGDLE 61 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANI 298 S + + +++ + + + A IL+K + + IA Sbjct: 62 RSLAAYLRLYEREPDNVDLMLSLGRIYRHLGRYDAALEILKKAEDIGGDTDEILYNIAKT 121 Query: 299 YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y + + + RA E+ + + + + + G D+A +++ P Sbjct: 122 YKRMGNYDEAADYFSRA---IEVKPDHAHAYDRLGNLYVLTGDTDKAIEVYKQGLRVDP 177 >gi|158522482|ref|YP_001530352.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511308|gb|ABW68275.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 643 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 45/371 (12%), Positives = 104/371 (28%), Gaps = 50/371 (13%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-----WI 56 ++ F++ V + + + W P ++ + A Sbjct: 297 WKVAGAVFLLLAVTVGALRAAKTHRFFIVGWLWFAGMMVPLSGIAQIGTQAMADHYMYLP 356 Query: 57 LLFAVSRFFLSCPAMLFHMLHKR----NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112 ++ + A++ + HK AL+TGL + + + ++ Sbjct: 357 MIGLLIAVVWGADAVMGNWKHKAAASWTATVVVLALFTGLSARQVGVWKNSFTLLNHALA 416 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLN 171 + E +L Q A + + P + ++L R G+L Sbjct: 417 VTKNNYEAHNHL--GQAFAEAGDNQNAIGHFIQALAIRPD-HAKSHHNLANVYVRTGNLE 473 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A+ + +AL P+ ++ +AI + A ++ L A Sbjct: 474 KAEHHYQQALVADPENAATFNSLGLVQAAQGRLHKAIASYQKALALAPDFAHAHHNLARA 533 Query: 232 RS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + ++ ++ AI + + A+ L +N+ +A Sbjct: 534 MAVSDRLEEAEVHYQRALAIN-----PDMAGTRLQLAEILTLKNRPAEAAR--------- 579 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 L S + + + E G +A Sbjct: 580 ----------------------HYEILTGQAPASADLNYLAGRAFYESGQTAKARPYLEQ 617 Query: 351 AMKIAPRKEIF 361 A+ I P+ + Sbjct: 618 ALAINPQMKAA 628 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 63/228 (27%), Gaps = 35/228 (15%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L GD +A + +AL I PD + YV +A Q Sbjct: 427 HLGQAFAEAGDNQNAIGHFIQALAIRPDHAKSHHNLANVYVRTGNLEKAEHHYQQALVAD 486 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E A + L A +G + + ++L L + Sbjct: 487 PE----NAATFNSLGLVQAAQGRLHKAIASYQKALALAPDF------------------- 523 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + H +A +S+ R IN + + + +++I Sbjct: 524 ----------AHAHHNLARAMA--VSDRLEEAEVHYQRALAINPDMAGTRLQLAEILTLK 571 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + AP LA S T K + + AL Sbjct: 572 NRPAEAARHYEILTGQAPASADLNYLAGRAFYESGQTAKARPYLEQAL 619 >gi|332232577|ref|XP_003265482.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Nomascus leucogenys] Length = 898 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 90/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 506 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 562 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 563 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 622 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 623 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 682 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 683 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 738 Query: 331 VSKIALEMGSIDQAHAKAML-AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A ++ E + LL+ I N DK L AL Sbjct: 739 LAQVLAVMGQTKEAEKMTNHIVLEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 797 Query: 389 MPDP 392 DP Sbjct: 798 PKDP 801 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 94/283 (33%), Gaps = 37/283 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 639 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 696 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT- 209 E + L G A + +A + P + A+ Q + + A Sbjct: 697 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKM 755 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + R + I EN DK + ++L+L I ++ Sbjct: 756 TNHIVLEETGCLECYRLLSAIYSKQENHDK-----ALDAIDKALQLKPK-DPKVI--SEL 807 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 ++ + + + +L+K ++ ++N + ++ + Sbjct: 808 FFTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWM 843 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 844 NMGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 886 >gi|205356887|ref|ZP_02342915.2| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325790|gb|EDZ13629.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 1180 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 89/295 (30%), Gaps = 28/295 (9%) Query: 100 IPLARKMHSYVSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEM 145 AR + + + E L+ LL Q AL A + Sbjct: 340 GDRARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQ 399 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + T +AV L + D +A+RY + L + + Y Sbjct: 400 ARAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSGNSNAVRGLANLYRQQSPQK 459 Query: 206 RA--ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A I L+ ++ + + L ++ +G + L L S+ Sbjct: 460 AAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW 519 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL- 317 + ++ L + +A+ + + + P+ PE Y LS + + L L Sbjct: 520 VTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLP 579 Query: 318 -EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + N E + V + A + + L + P I L LA Sbjct: 580 TSQWNSNIQELAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|307169156|gb|EFN61972.1| Pre-mRNA-processing factor 6 [Camponotus floridanus] Length = 929 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 41/257 (15%) Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E LE +LQ P + + GD+ +A+ + A +P++ Sbjct: 572 KTYGTRESLEALLQRAVAHCPKSEVLWLMG-AKSKWLAGDVPAARGILSLAFQANPNSEE 630 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLE 235 + A V+ E+ RA L + + +A A+ L+ +L+ Sbjct: 631 IWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAALRLLKEALD 690 Query: 236 NADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 D G + + +++K C NSI A+ +N+ KA Sbjct: 691 AFDDFPKLWLMKGQIEEQQGYLDKAIETYNQAIKKCPNSIPLWRLLAQLEHRKNQVTKAR 750 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKR--ALRLEEIN-KESVESLVIVSKIALE 337 +LEK N P+ A ++ + R A L +E S ++ ++ A+ Sbjct: 751 SVLEKARLKN--PKNAELWLEAVRNELKSGGARDMANTLMAKALQECPTSGLLWAE-AIF 807 Query: 338 MGSIDQAHAKAMLAMKI 354 M Q K++ A+K Sbjct: 808 MEPRPQRKTKSVDALKK 824 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + Sbjct: 275 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 333 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + +S++ S+ I AA + KR + K Sbjct: 334 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLEMEVKAKR---RVYRKA 383 Query: 287 WKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SV+ + ++++ + D A Sbjct: 384 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 436 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 437 RKVLNKARENIPTDRQIWTTAAKLEEANGN 466 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + N S E + K+ E ++A A AP + + A++E A ++ + Sbjct: 623 QANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAAL 682 Query: 379 LYWTQSALHA 388 + AL A Sbjct: 683 RL-LKEALDA 691 >gi|320164342|gb|EFW41241.1| pre-mRNA splicing factor [Capsaspora owczarzaki ATCC 30864] Length = 916 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 106/273 (38%), Gaps = 35/273 (12%) Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P E + E R G++ +++ A + +P++ + A V+ E++RA Sbjct: 583 PQAEELWLMG-AKEQWRAGNIEQSKQILMYAFNANPNSEEIWLAAVKLESETSEFARARA 641 Query: 210 FLNQKKKNAKEWNRN--------------RAILLIARSLENA---------------DKG 240 L++ + NA RA L+A ++ +G Sbjct: 642 LLDRARANAPTARVWMKSAKLEWQLNELERAKTLLAEGVQLFPEFDKLHMMRGQILMQQG 701 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY 299 D + E ++ C +SI + AA+ KA ILE+ +K + + Sbjct: 702 DENGAREAYKEGIRRCTSSIPLWLLAARLEEQTGNLTKARGILERARFKNQKNDTLWLEA 761 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK- 358 + + + +AL + + E S +++++ A+ M + AK++ A++ Sbjct: 762 VRVETRSGNAAAAQALMAKAMQ-ECPTSGLLLAE-AIFMEPVPLRRAKSLTAVQRNEDSP 819 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + +A++ A +K W + A+ A PD Sbjct: 820 HVLVAVAKLLWAERK-VEKAAEWFRRAIGADPD 851 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 36/205 (17%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +A E ++ L + +L G + ++++ C + + AK Sbjct: 543 HALEKFSSKQSLWKSAALLEKQHGTPATVHAVLEKAVRYCPQAEELWLMGAKEQWRAGNI 602 Query: 277 RKAEVILEKIWKVNPHP-EIANIYTHLLSENT--------VGK----------------- 310 +++ IL + NP+ EI L SE + + + Sbjct: 603 EQSKQILMYAFNANPNSEEIWLAAVKLESETSEFARARALLDRARANAPTARVWMKSAKL 662 Query: 311 ------LKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L+RA L ++ E + ++ +I ++ G + A ++ Sbjct: 663 EWQLNELERAKTLLAEGVQLFPEFDKLHMMRGQILMQQGDENGAREAYKEGIRRCTSSIP 722 Query: 361 FLLLAQIEQANSHNTDKILYWTQSA 385 LLA + + N K + A Sbjct: 723 LWLLAARLEEQTGNLTKARGILERA 747 >gi|224585412|ref|YP_002639211.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469940|gb|ACN47770.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 1150 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 89/295 (30%), Gaps = 28/295 (9%) Query: 100 IPLARKMHSYVSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEM 145 AR + + + E L+ LL Q AL A + Sbjct: 310 GDRARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQ 369 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + T +AV L + D +A+RY + L + + Y Sbjct: 370 ARAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQK 429 Query: 206 RA--ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A I L+ ++ + + L ++ +G + L L S+ Sbjct: 430 AAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW 489 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL- 317 + ++ L + +A+ + + + P+ PE Y LS + + L L Sbjct: 490 VTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLP 549 Query: 318 -EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + N E + V + A + + L + P I L LA Sbjct: 550 TSQWNSNIQELAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 604 >gi|194444308|ref|YP_002042863.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194402971|gb|ACF63193.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 1180 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 97/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIERSLENYRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ P Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPGQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|325525730|gb|EGD03477.1| HemY domain-containing protein [Burkholderia sp. TJI49] Length = 395 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 52/399 (13%), Positives = 123/399 (30%), Gaps = 25/399 (6%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + ++ + + V V + + S + + + L Sbjct: 3 LRGIVWLAILFAIAVALATVGRFDAGQVLLVYPPYRVDVSLNLFVIAVVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K N+ Sbjct: 63 IVRNIWRMPQRVAAYRARARNEKAQASLRDAIANLYAGRFSRAEKAAREALAVDA--NQG 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYA 177 L+ A +Y + + P R A + A Sbjct: 121 AASLVGATAAHRMHEYTR-RDDWLSKVDAPEWQDARLLAA----ADMRADARDADGALAA 175 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 L + ++ K W+ + L + + + + A+ L ++ EN Sbjct: 176 LADLQAGGKRIHAQQVALRAQQQLKNWAEVLK-LAKALEKREALHPAAAVRLRQQAAENL 234 Query: 238 ---DKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + D A + + + AA L+ ++ +A I+E+ N Sbjct: 235 LRERRHDPDALLEVWQSLSPAERQSPRL---ADLAADLLVPLERRTEARRIVEEALAHNW 291 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + Y + + +++A ++ + E + L + ++ + +A + A Sbjct: 292 DARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLEAA 351 Query: 352 MKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +K+A + LA++ + ++ +SAL Sbjct: 352 LKLADNEALKVRTHRALARLFEHLGETDKAAKHYRESAL 390 >gi|62182120|ref|YP_218537.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62129753|gb|AAX67456.1| putative TPR-repeat-containing protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716609|gb|EFZ08180.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 1180 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 89/295 (30%), Gaps = 28/295 (9%) Query: 100 IPLARKMHSYVSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEM 145 AR + + + E L+ LL Q AL A + Sbjct: 340 GDRARAVAQFEKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQ 399 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + T +AV L + D +A+RY + L + + Y Sbjct: 400 ARAVDNTDSYAVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQK 459 Query: 206 RA--ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A I L+ ++ + + L ++ +G + L L S+ Sbjct: 460 AAAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVW 519 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL- 317 + ++ L + +A+ + + + P+ PE Y LS + + L L Sbjct: 520 VTYRLSRDLWQAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLP 579 Query: 318 -EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + N E + V + A + + L + P I L LA Sbjct: 580 TSQWNSNIQELAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|15839026|ref|NP_299714.1| tetratricopeptide repeat protein [Xylella fastidiosa 9a5c] gi|9107626|gb|AAF85234.1|AE004052_9 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 398 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 51/389 (13%), Positives = 113/389 (29%), Gaps = 44/389 (11%) Query: 60 AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107 F A L + R G+ + GL + + A ++ Sbjct: 13 WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 72 Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163 + + ++ L +L + + + A + +L+ P + FA+ +L + Sbjct: 73 AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLLKRPDLTDHQKVFALLALGED 127 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222 + G L+ A+ T+ I AP ++ Y ++W +AI + + + Sbjct: 128 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVATGEPMG 187 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + A + + + + S+ A I + A Sbjct: 188 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRAGIIEGRIEADLGHHEAAVRA 247 Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333 E+ + +P P + Y + + A E + + +++ Sbjct: 248 WERAARHDPEYLPEIIPALLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 301 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391 + QA +K P L + A+ + LY + + + Sbjct: 302 LIESQEGPAQARGYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 361 Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417 P + G + W P K Sbjct: 362 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 388 >gi|114777718|ref|ZP_01452678.1| heat shock protein [Mariprofundus ferrooxydans PV-1] gi|114551934|gb|EAU54468.1| heat shock protein [Mariprofundus ferrooxydans PV-1] Length = 380 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 103/296 (34%), Gaps = 20/296 (6%) Query: 134 RQYNIAHEKLEMMLQIPA----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +L P A +L + G L+ A KAL+I D Sbjct: 86 GEIGRAVRIHQNLLARPDLAKSIHLQAHMALARDFQTGGLLDRALIQYGKALEIQSDHAG 145 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 EA ++ + EW A L++ ++ + ++ +RA L + + + + Sbjct: 146 ALEASLRIREQSSEWQLAEELLSRLERVRNESYSSHRAYLFSEMARQCLSQESRDEAATY 205 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 A +++L A + A + ++ + KA + + + + + + + LL+ + Sbjct: 206 AARAIELDPACAPARMVAIELAMAAAETDKAVTEI-QALRSHANEHFSLVIPQLLAHSDF 264 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKEIFLLLA 365 + L E+ ++ ++ + +S + AK + L A +E L A Sbjct: 265 YDNRGRELLAEMWRQQPDAELALSWLEALARERSADDAKVLYHDLGFVPATLRESLRLQA 324 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDG---YLSSVWLPLSPISKTLCYF 418 + + W + A + ++ + + W P + Sbjct: 325 VLGDEGDAHARFSRQWRKRAKN------YVCEQCGVEVIDVRWQ--CPQCHSWGSL 372 >gi|320161088|ref|YP_004174312.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1] gi|319994941|dbj|BAJ63712.1| hypothetical protein ANT_16860 [Anaerolinea thermophila UNI-1] Length = 1424 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 72/229 (31%), Gaps = 37/229 (16%) Query: 164 SCRIGDLNSAQRYATKALD---ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + D A++YA AL+ ++P A V ++ + L+ K E Sbjct: 1171 ALENEDYEQAKKYAEMALERDALNPKAIMAMIRVYNHLNKEEQSLSMLETLHGKLPPILE 1230 Query: 221 WNRNRAIL---------------------------LIARSLENADKGDMIASYHDAIESL 253 + +A L L + AD GD+ ++ A SL Sbjct: 1231 LDLEKASLIYRLRGAQAALSVTQRLVTDFPEDANALALHAQVLADLGDVKSAERFAFRSL 1290 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTV 308 + N ++ AK + + +A +L + ++P E+ +Y+ + Sbjct: 1291 RQEPNQPDLALFLAKMQRNNGQLDQAVHLLTQAIALDPQNVELYIELGQVYSERREYDLA 1350 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L+ I + I + A A K+AP Sbjct: 1351 --LQTFHHAIRIAPHDPRGYYYTALILRDGKDFSGAERMLQHAAKLAPD 1397 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 6/135 (4%) Query: 125 LEVQIALAERQYNIAHE-KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L Q+ A + Q P + A++ L G L+ A T+A+ + Sbjct: 1268 LHAQVLADLGDVKSAERFAFRSLRQEPNQPDLALF-LAKMQRNNGQLDQAVHLLTQAIAL 1326 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P + + Q Y +E+ A+ + + A R +L D D Sbjct: 1327 DPQNVELYIELGQVYSERREYDLALQTFHHAIRIAPHDPRG----YYYTALILRDGKDFS 1382 Query: 244 ASYHDAIESLKLCDN 258 + + KL + Sbjct: 1383 GAERMLQHAAKLAPD 1397 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 55/322 (17%), Positives = 108/322 (33%), Gaps = 32/322 (9%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y+AL+ ++ A A + + F E + ++A+ E Sbjct: 1027 YQALF-AFLAKDAGEKDSA--YQAILLALAQFPEEPEWQAIAAELAVELGDVEQGILHWE 1083 Query: 145 M--MLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEA-VVQ 196 L+ T E + E+ A ++A+ + W A V + Sbjct: 1084 KAVSLRPERTDYLIELGWTYMMVEA-----YEKAAEILSRAVKMESSNSSVWFNLAQVYK 1138 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++ AI+ + + IL +LEN D A+E L Sbjct: 1139 HLSRVED---AISCALRA-SEVDITHVQGFILASELALENEDYEQAKKYAEMALERDALN 1194 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLK 312 +IMA I + NK+ ++ +LE + P P ++ L Sbjct: 1195 PKAIMAMI---RVYNHLNKEEQSLSMLETLHGKLP-PILELDLEKASLIYRLRGAQAALS 1250 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 RL E +L + +++ ++G + A A +++ P + L LA++++ N Sbjct: 1251 VTQRLVTDFPEDANALALHAQVLADLGDVKSAERFAFRSLRQEPNQPDLALFLAKMQRNN 1310 Query: 372 SHNTDKILYWTQSALHAMPDPL 393 + + A+ DP Sbjct: 1311 GQLDQAV-HLLTQAI--ALDPQ 1329 >gi|326431022|gb|EGD76592.1| hypothetical protein PTSG_07709 [Salpingoeca sp. ATCC 50818] Length = 1102 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 84/243 (34%), Gaps = 20/243 (8%) Query: 137 NIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E L + A+ L G + A TKA + P Sbjct: 263 DKARAAFERALALDENNVPALVGTAILLINQKERGAMREAVERLTKAYKLDRTNPMTLNL 322 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + KE+S+A+ + A + + +A + + +G++ + ++ Sbjct: 323 LGNHFFHRKEYSKALGLVTHVAGTALDRD-IKAEAFHHMARIHHQQGNLDTALSHYYQAT 381 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYT-HLLSENT 307 L + + A + I + + R+A E ++K P +A +Y + + Sbjct: 382 SLSPSLLPAHYGLGQMYIHKKQLRRARDCFEIVYKHMPTNMAAAKILACMYVQEAETSRS 441 Query: 308 VGKLKRALRL----EEINKESVESLVIVSKIAL------EMGSIDQAHAKAMLAMKIAPR 357 L++A L + E +E+ V + + + +G +A + P Sbjct: 442 ATALEKATALFDKVLKQRPEDIEAWVELGMLLIRSNPKRALGVFGEAKTRLEALGSALPP 501 Query: 358 KEI 360 + + Sbjct: 502 ELV 504 >gi|125525286|gb|EAY73400.1| hypothetical protein OsI_01280 [Oryza sativa Indica Group] Length = 892 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 83/248 (33%), Gaps = 25/248 (10%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLY--FESCRIGDLNSAQRYATKALDIS 184 A E+++ ++L T R V L E GD+ +AQ +A Sbjct: 576 AAQLEKRHGTEESLY-ILLSKATTYNRHAEVLWLMYAKEKWLAGDVPAAQTILQEAYAYL 634 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240 P++ + A + E RA L++ ++ ++ R L N D+ Sbjct: 635 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEERKLL 694 Query: 241 ----------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A A + +A++ ++ + K++A+ +L K + Sbjct: 695 EEEEKINGLRKSRAVLTMARKKNPATPELWLAAV---RAELRHRNKKEADALLAKALQEC 751 Query: 291 PHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 P + ++ + ++ + + V+K+ D+A + Sbjct: 752 PTSGILWAAAIEMVP--RPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKFDKARSWLN 809 Query: 350 LAMKIAPR 357 A+ +AP Sbjct: 810 RAVTLAPD 817 >gi|292620687|ref|XP_001921543.2| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 1 [Danio rerio] Length = 1102 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 102/302 (33%), Gaps = 29/302 (9%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EY 120 + GY L L++ A ++ A + +YVS H + Sbjct: 163 EAIERYRQALRLKPDFIDGYINLAAALVA--AGDMEGA--VQAYVSALHCNPDLYCVRSD 218 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ + A ++ A +L G++ A + KA Sbjct: 219 LGNLLKA-----LGRLEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKA 273 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + + A+ + RA+ + + N A++ + ++G Sbjct: 274 VTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQG 329 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + +++L + A A ++ + +AE ++ P H + N Sbjct: 330 LIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNL 389 Query: 300 THLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ E G ++ A++L + + ++ + + G + +A A++I+ Sbjct: 390 ANIKRE--QGNIEEAVQLYRKALEVFPDFAAAHSNLASVLQQQGKLQEALMHYEEAIRIS 447 Query: 356 PR 357 P Sbjct: 448 PT 449 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 61/206 (29%), Gaps = 24/206 (11%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A E L++ T ++ +L G++ A + KAL++ PD + Sbjct: 366 SEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLAS 425 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A+ + + + + A + D+ + ++++ Sbjct: 426 VLQQQGKLQEALMHYEEAIRISPTF----ADAYSNMGNTLKEMQDIQGALRCYTRAIQIN 481 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTV 308 A A +A K+ P+ + Y +L + Sbjct: 482 PAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYD 539 Query: 309 GKLKRA----------LRLEEINKES 324 ++K+ RL ++ Sbjct: 540 ERMKKLVSIVADQLEKNRLPSVHPHH 565 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 18/156 (11%) Query: 148 QIPATR-EFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLA 201 T+ + L + R GD +A+ + + PD V + + Sbjct: 67 STEPTKHVLSFQGLAELAHREYQSGDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRR 126 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + S + L K+ N A + ++G + + ++L+L + I Sbjct: 127 LDMSFQFSTLATKQ------NPMLAEAYSNLGNVHKERGQLQEAIERYRQALRLKPDFID 180 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEI 295 I A +L++ A + + H P++ Sbjct: 181 GYINLAAALVAAGDMEGAV----QAYVSALHCNPDL 212 >gi|149912346|ref|ZP_01900904.1| putative N-acetylglucosaminyl transferase [Moritella sp. PE36] gi|149804572|gb|EDM64645.1| putative N-acetylglucosaminyl transferase [Moritella sp. PE36] Length = 254 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 62/191 (32%), Gaps = 39/191 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEY--LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A K+H + + + +E L L + LA + A E ++ P R+ Sbjct: 83 GEVQRAIKIHQNLIARPSLTHEQRNLALLQLARDYLAAGLVDRAEELFLKLIDEPEHRQV 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ ++ Y KEW +AI + K Sbjct: 143 AL----------------------------------TQLIIIYEQTKEWEQAI-TIGNKL 167 Query: 216 KNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K + R A + + + ++L+ + + ASI A I Q Sbjct: 168 KKMGDAKIERKIAHFYCSLAASPTMLDEPKKRLTSLKKALQYDKHCVRASIMLADLHIEQ 227 Query: 274 NKKRKAEVILE 284 + +KA V LE Sbjct: 228 GEHKKAIVWLE 238 >gi|254483161|ref|ZP_05096394.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] gi|214036532|gb|EEB77206.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 619 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 66/248 (26%), Gaps = 43/248 (17%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L E + A + A +L +T A++ L + R G A +A Sbjct: 5 LLQEAESAHRRGDLSNAERLYRQLLSESSTNSSALFGLGTLAMRSGQYKKAADLLEQAAV 64 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAIT--FLNQKKKNAKEWNRNRAILLIARSLENADKG 240 I P A + + + + AI + + E A D Sbjct: 65 IEPHAADIGLNLALALQKSGQIKEAIKHALRSAALASGDE------HFANAIGKVLLDLR 118 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 +A+ +I ++++ + +A +L Sbjct: 119 QPVAAMELLRS---CSPTRASTTILLSRAMGALGDWDRAVALL----------------- 158 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-IAPRKE 359 L + N E V +S A ++ A A + I P Sbjct: 159 --------------RSLAKSNSSDPEIAVELSVAAGKLRDYPLAIASFKHYLTLITPTAS 204 Query: 360 IFLLLAQI 367 L A + Sbjct: 205 DHLRFADL 212 >gi|213967293|ref|ZP_03395442.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato T1] gi|213928135|gb|EEB61681.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato T1] Length = 1230 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 79/250 (31%), Gaps = 51/250 (20%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221 + G L++AQ + L P ++ + A+ L+ ++ + Sbjct: 331 QAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQSKLGDS 390 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R +A+ + +GD+ A+ +++K +++ A+ + ++ KA Sbjct: 391 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 450 Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302 +++++ K P P++ + + Sbjct: 451 LIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFTRIPVDQRTPDMKALADEVTMTVQ 510 Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L RL+ + S E + ++ ++ G + A A+ Sbjct: 511 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLASAYIDAGEPARGREMARAAIAQ 570 Query: 355 APRKEIFLLL 364 AP L+L Sbjct: 571 APLPSADLML 580 >gi|189527635|ref|XP_001921570.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 2 [Danio rerio] Length = 1045 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 102/302 (33%), Gaps = 29/302 (9%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EY 120 + GY L L++ A ++ A + +YVS H + Sbjct: 106 EAIERYRQALRLKPDFIDGYINLAAALVA--AGDMEGA--VQAYVSALHCNPDLYCVRSD 161 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ + A ++ A +L G++ A + KA Sbjct: 162 LGNLLKA-----LGRLEEAKRCYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKA 216 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + + A+ + RA+ + + N A++ + ++G Sbjct: 217 VTLDASFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQG 272 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + +++L + A A ++ + +AE ++ P H + N Sbjct: 273 LIDLAIDTYRHAIELQPHFPDAYCNLANAMKEKCNVSEAEECYNTALRLCPTHADSLNNL 332 Query: 300 THLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ E G ++ A++L + + ++ + + G + +A A++I+ Sbjct: 333 ANIKRE--QGNIEEAVQLYRKALEVFPDFAAAHSNLASVLQQQGKLQEALMHYEEAIRIS 390 Query: 356 PR 357 P Sbjct: 391 PT 392 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 61/206 (29%), Gaps = 24/206 (11%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A E L++ T ++ +L G++ A + KAL++ PD + Sbjct: 309 SEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVQLYRKALEVFPDFAAAHSNLAS 368 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A+ + + + + A + D+ + ++++ Sbjct: 369 VLQQQGKLQEALMHYEEAIRISPTF----ADAYSNMGNTLKEMQDIQGALRCYTRAIQIN 424 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTV 308 A A +A K+ P+ + Y +L + Sbjct: 425 PAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCLQIVCDWTDYD 482 Query: 309 GKLKRA----------LRLEEINKES 324 ++K+ RL ++ Sbjct: 483 ERMKKLVSIVADQLEKNRLPSVHPHH 508 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 17/144 (11%) Query: 159 SLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQ 213 L + R GD +A+ + + PD V + + + S + L Sbjct: 22 GLAELAHREYQSGDFEAAEHHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDMSFQFSTLAT 81 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K+ N A + ++G + + ++L+L + I I A +L++ Sbjct: 82 KQ------NPMLAEAYSNLGNVHKERGQLQEAIERYRQALRLKPDFIDGYINLAAALVAA 135 Query: 274 NKKRKAEVILEKIWKVNPH--PEI 295 A + + H P++ Sbjct: 136 GDMEGAV----QAYVSALHCNPDL 155 >gi|323143196|ref|ZP_08077892.1| putative hemY protein [Succinatimonas hippei YIT 12066] gi|322417037|gb|EFY07675.1| putative hemY protein [Succinatimonas hippei YIT 12066] Length = 387 Score = 56.1 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 42/385 (10%), Positives = 112/385 (29%), Gaps = 34/385 (8%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ V I ++ + I + + S + + Sbjct: 1 MIKICIALLVTCAAIFIGPYLADSQGYIHIATNDYIIEMSVVTGTVLTVIAFIIFYFAVN 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P ML +R K ++ + R + + Sbjct: 61 FVLSVMHLPHGASLMLKRRADKKQITWQNNAFIAYEEGDFK--RTLALFNKAPKKDQIPT 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYAT 178 + A Y L+ + + + AV ++ ++G++ +A Sbjct: 119 FTKFIAADAAFELGDYAKTTAILDEIEKSDPHAKVAV-AIVRAKMNFKLGNVEAALE--- 174 Query: 179 KALDISP-DAPW-VTEAVVQQYVL--AKEWSR----AITFLNQKKKNAKEWNRNRAILLI 230 + P + + L ++ A ++ K + E N Sbjct: 175 ---TLQPLKLKDSSFISKISYQSLKNENDFEGLAEMAPRLISDKIIDDHEANNIYTAAFT 231 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + +A + ++ + + + L+ ++ + + + + Sbjct: 232 QKLALLTKTNEALALRKLLPKKVRY---ILPIN---TQLLLKIDEFKDTNAVNKLACDLL 285 Query: 291 PH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV----IVSKIALEMGSID 342 H PE+ ++L S + +L E++ E+ ++++ + Sbjct: 286 SHNQDEPELYKAISNLQSALPKVREAVGKKL-EMHAADDEAKCSMLKALAQLESNENLNE 344 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQI 367 +A + AM+I +I LA I Sbjct: 345 KACEHLLAAMQIKEDADICYRLALI 369 >gi|301156126|emb|CBW15597.1| conserved protein [Haemophilus parainfluenzae T3T1] Length = 392 Score = 55.7 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 58/200 (29%), Gaps = 44/200 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151 + A ++H + + + E LL Q + Y+ A +M+ P Sbjct: 91 GEVDRALRIHQALDRSPNYSFEQ--KLLAKQ--QLAKDFMTVGFYDRAEALYIIMVDEPE 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 E A+ L + + A A K ISP Sbjct: 147 FAENALQQLLVIYQKTKEWKKAVNIAEKLAKISPK------------------------- 181 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 E N A +L + ++L + S+ AS+ A + Sbjct: 182 --------ENNVELAQCYCEYALSGELES-ADEKRSILQKALNVSPTSVRASMLLADLEM 232 Query: 272 SQNKKRKAEVILEKIWKVNP 291 + R+A LE I NP Sbjct: 233 ANKNYRQAIQFLENILDQNP 252 >gi|124024099|ref|YP_001018406.1| hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT 9303] gi|123964385|gb|ABM79141.1| Hypothetical protein P9303_24081 [Prochlorococcus marinus str. MIT 9303] Length = 764 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 92/279 (32%), Gaps = 44/279 (15%) Query: 117 HNEYLVYLLEVQIAL-AERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNS 172 + E ++ L+ +AL + + + A +L + +A+ + E R D Sbjct: 2 NQEEIMQQLQAAVALHNQGELDQAEAIYRQVLAVDENNFYALNFCGCIQREKKRFDD--- 58 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQK-------------K 215 A + A+ P P + + A+ W AI L+ K Sbjct: 59 AITLLSSAVSAQPGNPDANYNLGNVFKDAERWDEAISCYEKTLDLKAEYPEALNNLGICL 118 Query: 216 KNAKEWNRNRAILLIARSLE-------------NADKGDMIASYHDAIESLKLCDNSIMA 262 K +++ + +L A S + ++ + ++++ + A Sbjct: 119 KETEQYEHSEIVLKRAISRQPRFAAAWLNLGNTLKEQKKYSEAIVSYRNAIEVKPDFAEA 178 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRL 317 + L + +A K +V P+ A Y L + Sbjct: 179 YLNLGNVLKEEGAVEEAIASYRKAIEVK--PDCAGAYFSLGFVLKGEGEVEEAIVSYRNA 236 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E+ + E+ + + + E G +++A A A+++ P Sbjct: 237 IEVKPDLAEAYLNLGYVLKEEGDVEEAIASYRQAIEVKP 275 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 63/199 (31%), Gaps = 39/199 (19%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G + A KA+++ PD ++ E AI + + Sbjct: 187 KEEGAVEEAIASYRKAIEVKPDCAGAYFSLGFVLKGEGEVEEAIVSYRNAIEVKPDL--A 244 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK-------- 276 A L + L+ ++GD+ + +++++ A + ++ Sbjct: 245 EAYLNLGYVLK--EEGDVEEAIASYRQAIEVKPEF-------ADAYLNLGNVLEEEGEIE 295 Query: 277 ------RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325 R+A + +P+ Y+ L + + ++ + ++K + Sbjct: 296 EAIASYRQAIEV---------NPDFVEAYSDLGKLFYEGGDYMSSIEFFQKALSLDKNHL 346 Query: 326 ESLVIVSKIALEMGSIDQA 344 +S + G ID A Sbjct: 347 KSAATLGFSFFRCGQIDAA 365 >gi|300795427|ref|NP_001179690.1| transmembrane and TPR repeat-containing protein 1 [Bos taurus] Length = 939 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 R A + LQ+ A+++L A ++ P+ Sbjct: 583 LTRDTTEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAY 642 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A K + + L + D G + + Sbjct: 643 SSLASLLAEQERFKEAEEIYLAGIKKCPDSSD----LHNNYGVFLVDTGFPEKAVAHYQQ 698 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 ++KL + +A + + S ++A + K ++P + +Y + + Sbjct: 699 AIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTEILSP---LGALYYN--T 753 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363 L+ + E + ++++ MG +A + E + L Sbjct: 754 GRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSDIVSEETGCLECYRL 813 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I DK L AL DP Sbjct: 814 LSAIHSKQEQ-HDKALDAIDKALKLKPKDP 842 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 95/286 (33%), Gaps = 43/286 (15%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + ++A E + LQ+ Sbjct: 680 GVFLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGDNSVAEEWYKRALQVA 737 Query: 151 A-TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 T + LY G A + +A+ + P + A+ Q + + Sbjct: 738 RKTEILSPLGALY---YNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQ----- 789 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICA 266 +K + + L R L ++ + + ++LKL I Sbjct: 790 -TKEAEKMTSDIVSEETGCLECYRLLSAIHSKQEQHDKALDAIDKALKLKPK-DPKVI-- 845 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ ++ + + + +L+K ++ E+N + + Sbjct: 846 SELFFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQ 881 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + + + I G+ A A+++ P ++ LA++++ Sbjct: 882 AWMNMGGIQHIKGNYVSARTYYERALQLVPDSKLLQENLAKLDRLE 927 >gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri str. Fusaro] gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri str. Fusaro] Length = 397 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 115/322 (35%), Gaps = 40/322 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIA----HEKLE 144 GL ++ N A K + + LL + Q +Y+ A + ++ Sbjct: 57 GLDFLSCGNFNEAMKAFDKA----IEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIK 112 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAK 202 + + P ++ F ++G + A + KAL++ PD P W +A+ A Sbjct: 113 INAEDPDI----WNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKAL--NLSQAG 166 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 ++ AI + + ++ + + + G + ++++L N A Sbjct: 167 DYKAAIEAYEKVLEENSDYKE----AWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEA 222 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA--NIYTHLLS-ENTVGKLKRALRLEE 319 + S R+A +K +++P + A N+ L + E +K + E Sbjct: 223 WHYKGVDMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIE 282 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQI------- 367 IN E+ + +M ++A A ++ P + +LAQ+ Sbjct: 283 INSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESL 342 Query: 368 ---EQANSHNTDKILYWTQSAL 386 EQA N + W A+ Sbjct: 343 EIYEQALKLNPEAADSWFGKAV 364 >gi|321463604|gb|EFX74619.1| hypothetical protein DAPPUDRAFT_324191 [Daphnia pulex] Length = 1043 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 31/303 (10%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 109 EALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 166 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L GD+ A + K Sbjct: 167 NLLKA-----LGRLDEAKACY---LKAIETRGDFAVAWSNLGCVFNAQGDIWLAIHHFEK 218 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 219 AVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NHAVVHGNMACVYYEQ 274 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + +++L + A A +L + + + AE ++ P H + N Sbjct: 275 GLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGQVQDAEDCYSTALRLCPAHADSLNN 334 Query: 299 YTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E G ++ A RL + + ++ + + G +++A A++I Sbjct: 335 LANIKRE--QGFIEEATRLYLKALDVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 392 Query: 355 APR 357 P Sbjct: 393 QPS 395 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A +S + H + L L I + A L + A Sbjct: 309 GQVQDAEDCYSTALRLCPAHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPDFAAAH 366 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 367 SNLASVLQQQGKLNEALMHYKEAIRIQPSFADAYSNMGNTLKEMQDINGALQCYTRAIQI 426 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G + + +LKL + A A L Sbjct: 427 NPAF----ADAHSNLASIHKDSGQIPEAIQSYRTALKLKPDFPDAYCNLAHCL 475 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P P + + A + + A L + Sbjct: 285 RRAIELQPHFPDAYCNLANALKEKGQVQDAEDCYSTALRLCPA----HADSLNNLANIKR 340 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + + A A L Q K +A + ++ ++ P A+ Sbjct: 341 EQGFIEEATRLYLKALDVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ--PSFAD 398 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G I +A A+ Sbjct: 399 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIQSYRTAL 458 Query: 353 KIAPR 357 K+ P Sbjct: 459 KLKPD 463 >gi|299136966|ref|ZP_07030149.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp. MP5ACTX8] gi|298601481|gb|EFI57636.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp. MP5ACTX8] Length = 745 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 19/201 (9%) Query: 93 MSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE---RQYNIAHEKLEMMLQ 148 +++ A A + +E LL + AL E + A L L+ Sbjct: 535 VALGNAGQTDEALTVLQGA-----IDHEPDNALLWYEKALIESRRGDSDKAVADLRKTLE 589 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + A +L + GD+ A+ AL I+P + + +W +A Sbjct: 590 LKPDFADAQNTLGSVLAQSGDIQHAETAFRAALTINPYDSATRANLGRLLAGTGDWKQAA 649 Query: 209 TFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 L + + + + A+ L+ + +A +LK+ A + Sbjct: 650 FHLQKAVQLDPANVNAHGDYAVALLQLKRLP-------EAKTEAEAALKINPEFGPAQLN 702 Query: 266 AAKSLISQNKKRKAEVILEKI 286 A+ L+ Q + R A +LEK Sbjct: 703 LAEILLQQGQARMALPLLEKA 723 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 10/208 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+L A +AL + P + + A + A+T L + + Sbjct: 504 RHTGNLPGAIDAYRQALKLDPLSSRAQRRLGVALGNAGQTDEALTVLQGAIDHEPD---- 559 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+L ++L + +GD + D ++L+L + A L + AE Sbjct: 560 NALLWYEKALIESRRGDSDKAVADLRKTLELKPDFADAQNTLGSVLAQSGDIQHAETAFR 619 Query: 285 KIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +NP+ + A + + + +++ +V + + L++ Sbjct: 620 AALTINPY-DSATRANLGRLLAGTGDWKQAAFHLQKAVQLDPANVNAHGDYAVALLQLKR 678 Query: 341 IDQAHAKAMLAMKIAPRKEIFLL-LAQI 367 + +A +A A+KI P L LA+I Sbjct: 679 LPEAKTEAEAALKINPEFGPAQLNLAEI 706 >gi|295400328|ref|ZP_06810307.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977603|gb|EFG53202.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus thermoglucosidasius C56-YS93] Length = 1396 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 95/265 (35%), Gaps = 28/265 (10%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ S A A K L L ++ A +++ A E L+I Sbjct: 888 GMFSKAIGVYEQASKAQKSTF--------PLYRL--AEMYRAFERWDEAKRYYEACLEID 937 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--- 207 A L + +++ + + KAL+ P + A + Sbjct: 938 DAFAVAHLRLAVLNEMEENIDKQRFHLQKALEHDPLH-------IHVACAAALFDDPSLL 990 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + ++ A + ++ I ++ GD+ ++L+L + AA Sbjct: 991 LQTMEAARERAGDVWYYDSLGYIYGAM-----GDISKEKEAVEQALRLHPDHPDVLHHAA 1045 Query: 268 KSLISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 K L+ + K R+A ILE++ + + + ++ Y S G K RL + ++ + Sbjct: 1046 KVLVKEGKSREAAAILERLIEQDVRNEDLYETYVQAFSYTMRGIGKLRERLRKWKLDNQK 1105 Query: 327 SLVIV--SKIALEMGSIDQAHAKAM 349 ++ + AL +D A +A Sbjct: 1106 KSIVYMHAASALSSSMLDIARGEAD 1130 >gi|170701256|ref|ZP_02892224.1| HemY domain protein [Burkholderia ambifaria IOP40-10] gi|171319137|ref|ZP_02908258.1| HemY domain protein [Burkholderia ambifaria MEX-5] gi|170133849|gb|EDT02209.1| HemY domain protein [Burkholderia ambifaria IOP40-10] gi|171095657|gb|EDT40616.1| HemY domain protein [Burkholderia ambifaria MEX-5] Length = 395 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 115/409 (28%), Gaps = 45/409 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + ++ + + V V + + S + + + L Sbjct: 3 LRGIVWLAILFGIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVITIVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAARDALAVDAN---- 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 Q A + AH E + + + A+ A Sbjct: 119 -------QGAASLVAATAAHRMHEYTRRDD----------WLSKVDAPEWQDARLLAAAD 161 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + A + + A + ++ K W + E Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221 Query: 241 DMIASYHDAIESL----KLCDN--------SIM-------ASICAAKSLISQNKKRKAEV 281 + A E+L + + + AA+ L+ ++ +A Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPLERQSPRLADLAAELLVPLERRPEARR 281 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 I+E+ N + Y + + +++A ++ + + + L + ++ + Sbjct: 282 IVEEALAHNWDARLLRRYPDTAGGDALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLW 341 Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K A + LA++ + ++ +SAL Sbjct: 342 GKAQSFLEAALKQADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|294055962|ref|YP_003549620.1| hypothetical protein Caka_2434 [Coraliomargarita akajimensis DSM 45221] gi|293615295|gb|ADE55450.1| hypothetical protein Caka_2434 [Coraliomargarita akajimensis DSM 45221] Length = 554 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 75/196 (38%), Gaps = 5/196 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ AR+ + + LL I + + ML+ A+ Sbjct: 281 GDLDQARRYAILRNVAAPMSAAPRLELLY--IYNLSGDEEREQRETKRMLKQFRKDVTAL 338 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 SL + G++ A+R +AL+ +++ +++ +++ AI+F + K Sbjct: 339 QSLANFAADTGNIELARRTYEEALENEFPIDSFALLLIEAHLVDADYAGAISFAEELIKE 398 Query: 218 AKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNK 275 +W N+ + I R++ + +++ N AS A A+ + + Sbjct: 399 KPDWLNQRKPIFESLRAVASFGINRPDLG-EIYLQAFLDGSNVQPASFLAVARRFNNIER 457 Query: 276 KRKAEVILEKIWKVNP 291 ++A +L +++ P Sbjct: 458 PQQARKVLMAAYQLEP 473 >gi|309791248|ref|ZP_07685779.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] gi|308226674|gb|EFO80371.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] Length = 1126 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 101/332 (30%), Gaps = 56/332 (16%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATR 153 A N + +++Y N L +L LA + A + + +LQ P T Sbjct: 772 ALGNQNPNQAINAYSKAVRLDPNSALPHLKLATAYLATNRLQSAEDSAQNVLQRTQPPTD 831 Query: 154 EF-------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 A+ L + R DL A+++ T+AL ISP + + V +W Sbjct: 832 LVVADLRAQALVLLGDVALRKPDLALARQHYTEALQISPQMLTAQLGMGRVAVGEGQWGV 891 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ + A + + G + + + ++L + A + Sbjct: 892 ALGYFETA--TNLPGGTQDANVQFWLAEGLLRSGALDRAMNAYQQALAIRPTFPEALLGL 949 Query: 267 AKSLISQNKKRKAEVILEK------------------------------IWKV--NPHPE 294 A+ +Q A +E+ + + Sbjct: 950 AQLQYAQGDPATALQTVEQSIGQRGDYAEALLFKGKLLQEYGRIDQALVAYDASIRASSQ 1009 Query: 295 IANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 IA Y + + L+RA+ L E+ + + DQAH Sbjct: 1010 IAETYYRRSLLLISTERYDKAINDLRRAVTL---QPNFPEAHYWMGRAYYARNQDDQAHD 1066 Query: 347 KAMLAMKIAP--RKEIFLLLAQIEQANSHNTD 376 A+ + P + ++ L E + + Sbjct: 1067 AFKRAVDLNPSYTEALYYLGLAAEDLDRRDEA 1098 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 69/223 (30%), Gaps = 4/223 (1%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G +++ +A + + V + L + A + L Sbjct: 877 LGMGRVAVGEGQWGVALGYFETATNLPGGTQDANVQFWLAEGLLRSGALDRAMNAYQQAL 936 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 I T A+ L GD +A + +++ D + +A Sbjct: 937 AIRPTFPEALLGLAQLQYAQGDPATALQTVEQSIGQRGDYAEALLFKGKLLQEYGRIDQA 996 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + + + A RSL + +D ++ L N A Sbjct: 997 LVAYDASIR----ASSQIAETYYRRSLLLISTERYDKAINDLRRAVTLQPNFPEAHYWMG 1052 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 ++ ++N+ +A ++ +NP A Y L +E+ + Sbjct: 1053 RAYYARNQDDQAHDAFKRAVDLNPSYTEALYYLGLAAEDLDRR 1095 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 95/298 (31%), Gaps = 32/298 (10%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL ++ P + + + + L E + + N A + +LQ+ Sbjct: 496 GLAALFGRTNPADEGLRLLETLDLRTPDRPPILLAEARAYRVAEKLNEADRLYDRVLQLI 555 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-------APWVTEAVVQQYVLAKE 203 R + + GD +A + A++ P + + + Sbjct: 556 PQRPEGYFGKAMVAQERGDSGTAMQLLQMAIERDPSFFPARIELAQIAQQRGDLNAAISQ 615 Query: 204 W----------SRAITFLNQKKKNAKE-WNRNRAILLIARSLENA----------DKGDM 242 W + A+ + + + +LL + A D G Sbjct: 616 WRSVSIQRPGPAAAVPLAQALRLSGPTGYVEAEQVLLPLSVTDPAAAIELGRLYNDAGRP 675 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 AS ++L+L S A+ + L + AE L + + A + Sbjct: 676 EASIQAYRDALRLDPQSSTAAFELGERLAVLGDLKAAEAALRDALRFDDRNIAARLALAR 735 Query: 303 LSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L E +G+ RA + I + +L+++ AL + +QA A+++ P Sbjct: 736 LYEGPMGQPDRADKEYGIALDQGVHDLNTLILIGDTALGNQNPNQAINAYSKAVRLDP 793 >gi|165976432|ref|YP_001652025.1| HemY protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876533|gb|ABY69581.1| HemY protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 416 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + +S V I ++ S +++ + + Sbjct: 1 MFRVLFLMLLLLASLIVGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F ++ R + K + GLM ++ + A K+ S ++ +E Sbjct: 61 IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 ++ L++ + A A++ L + G N A A Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160 Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + + P A +++++ + + K++K +N IL Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210 >gi|94971634|ref|YP_593682.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553684|gb|ABF43608.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 1404 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 89/269 (33%), Gaps = 9/269 (3%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + + + +Q A L ++G + A+R + L Sbjct: 107 LLLGYTSRLAGRNQESINAYNHAIQTDPKSLDAKSGLAQTYMKMGRTDEAKRLLAQVLAA 166 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + Y+ K++ + I +L + A + ++ Sbjct: 167 GSTRQNDLLVAGELYLRTKDYQQGINYLQRADNLKPN-----AHAELLMAMGYMKMKQPQ 221 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHL 302 + + + N++ A + + A L + P +A++ +T+ Sbjct: 222 KAKQLLDMAKRRAPNNVEIFQAVATFYREDHDYKNAIATLNSAPRKTPA-LLADLGFTYE 280 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIF 361 LS + ++ + ++ + ++ ++ G +A A I P + Sbjct: 281 LSGDKQSAAATYVKAANAAPKEIKFQLSAAQSLIQSGDKTKAQDFLKRAAAIDPNHYRLH 340 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMP 390 + A + ++ + N + + + Q AL AMP Sbjct: 341 AIRAGLAKSENRNDEAVKEY-QLALSAMP 368 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 89/278 (32%), Gaps = 23/278 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--RE 154 + + A +YV + E L Q + A + L+ I R Sbjct: 282 SGDKQSAA--ATYVKAANAAPKEIKFQLSAAQSLIQSGDKTKAQDFLKRAAAIDPNHYRL 339 Query: 155 FAVY-SLYFESCRIGDLNSAQRYATKALDISPD--APWVTE--AVVQQYVLA-----KEW 204 A+ L + + A + AL P P +++ + Sbjct: 340 HAIRAGL---AKSENRNDEAVKEYQLALSAMPKEGVPEGQLYPVLLRLNLSEALKDTGNT 396 Query: 205 SRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A + ++ + N +A L R+ A D + D E+ KL ++ + Sbjct: 397 EAAKQQVEIAEQEISKINVEGPAKAEFLRVRASIKASGEDYAGAEADLKEAQKLDPDNQL 456 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLE 318 ++ A L +K +++ + I + +P + A Y +T G L Sbjct: 457 ITLQYANLLWKAGRKDESKQMYLGILQGDPKNRYALEALGYLARDVGDTAGAEHYFTALA 516 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + + + +A A A ++AP Sbjct: 517 QAYPDDYIAYLALGDLYTATRDFTRALAAYDKAHELAP 554 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 79/245 (32%), Gaps = 22/245 (8%) Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYD-KGYKA---LYTGLMSIAAHNIPLARKMHSY 109 W+LL SR + H D K A L M + + A+++ + Sbjct: 105 LWLLLGYTSRLAGRNQESINAYNHAIQTDPKSLDAKSGLAQTYMKMGRTD--EAKRLLAQ 162 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCR 166 V + L L+ ++ L + Y L+ + Sbjct: 163 VLAAGSTRQNDL--LVAGELYLRTKDYQQGINYLQRADNLKPNAHAELLMAMGYMKMKQ- 219 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A++ A +P+ + +AV Y ++ AI LN R Sbjct: 220 ---PQKAKQLLDMAKRRAPNNVEIFQAVATFYREDHDYKNAIATLNSA-------PRKTP 269 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LL GD ++ +++ I + AA+SLI K KA+ L++ Sbjct: 270 ALLADLGFTYELSGDKQSAAATYVKAANAAPKEIKFQLSAAQSLIQSGDKTKAQDFLKRA 329 Query: 287 WKVNP 291 ++P Sbjct: 330 AAIDP 334 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 3/120 (2%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATRE 154 A+ A Q + L+ L + + + + + +LQ P R Sbjct: 432 ASGEDY-AGAEADLKEAQKLDPDNQLITLQYANLLWKAGRKDESKQMYLGILQGDPKNRY 490 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + +L + + +GD A+ Y T PD A+ Y ++++RA+ ++ Sbjct: 491 A-LEALGYLARDVGDTAGAEHYFTALAQAYPDDYIAYLALGDLYTATRDFTRALAAYDKA 549 >gi|29655359|ref|NP_821051.1| HemY [Coxiella burnetii RSA 493] gi|154705813|ref|YP_001425479.1| HemY [Coxiella burnetii Dugway 5J108-111] gi|165924033|ref|ZP_02219865.1| hemY protein [Coxiella burnetii RSA 334] gi|212213524|ref|YP_002304460.1| HemY [Coxiella burnetii CbuG_Q212] gi|29542631|gb|AAO91565.1| HemY [Coxiella burnetii RSA 493] gi|154355099|gb|ABS76561.1| HemY [Coxiella burnetii Dugway 5J108-111] gi|165916518|gb|EDR35122.1| hemY protein [Coxiella burnetii RSA 334] gi|212011934|gb|ACJ19315.1| HemY [Coxiella burnetii CbuG_Q212] Length = 392 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 49/375 (13%), Positives = 116/375 (30%), Gaps = 34/375 (9%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + I + + T+ + + L + ++F + + + Sbjct: 21 MTRDTGYLLIVYRHWSIETTLWAAILSLLILFILFYIIFRLLGRAARLSKNIHRWRKMKQ 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 Y + + GL +A P A +K+ LV L A +Q Sbjct: 81 YRRARQLTTAGLCELAEGRWPSAEQKLVKGAK----ITKNPLVNYLAAAQAANAQQSYER 136 Query: 140 HEKLEMMLQIPATREFA--VYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAV 194 + + T+ + ++ A + +P+ + + Sbjct: 137 RDNYLRLAH---TKAKGSDIAVDLTQARLQISKNQWEQALATLERVNRANPNHACTLQLL 193 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA----I 250 Q YV ++W + L + +K E A +L+ +K + A Sbjct: 194 KQVYVHLQDWEKLRHLLPRLRKQKVE---------SAEALDAFEKIIYVNLLSAADRKGK 244 Query: 251 ESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 ++L + I SLI ++ KA ++E K + + + Y Sbjct: 245 QALIAMWNSFPRRSTQEIELIDVYTHSLIKYDEGDKAIPLIESALKKEWNSNLVSTYGLA 304 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 E +L A + + E + + +++ + +A ++K+ P + Sbjct: 305 RGEKKTDQLTTAETWLKKYPKEPELFLCLGRLSRREKFLGKARDYLQTSIKLMPSSAAYR 364 Query: 363 LLAQIEQANSHNTDK 377 L Q+ + + Sbjct: 365 ELGQVYEEQNQKDSA 379 >gi|291567436|dbj|BAI89708.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 883 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 79/272 (29%), Gaps = 44/272 (16%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIG 168 + E + + L E +++ A K + ++Q A L + Sbjct: 2 ERDFQLPGELVSLHQQAIAYLEEGKFDEAIAKCQQVIQQQPEWVMAYKTLGLALQKSNR- 60 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNR 225 L +A+ KA+++ P+ + Y W A T L Q + RN Sbjct: 61 -LEAAENAYKKAINLDPNLVAAYGNLGSLYAQQGRWEEAETTLKQAINIDPNFRGVYRNL 119 Query: 226 AILLIARSL------------------------------ENADKGDMIASYHDAIESLKL 255 A +L R A+ G + +++ Sbjct: 120 ARVLTQRGRPEEAQIYWKRGLQLDGILKQRGQEELQIGNTLAEAGKWSEAVSAFQKAIAY 179 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310 +A L+ N+ +A EK + P H + + L Sbjct: 180 HPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHHHLGEAFQALNQ--PALA 237 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSID 342 + + IN + S ++K A ++ + Sbjct: 238 VSAFRKAIAINPDFCWSYYQLAKAATQLQQWE 269 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 73/225 (32%), Gaps = 35/225 (15%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +++ A + + A + L ++ A KA+ I PD W Sbjct: 163 AGKWSEAVSAFQKAIAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHH 222 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + + + A++ + ++ L + + D+ +Y AI+ Sbjct: 223 HLGEAFQALNQPALAVSAFRKAIAINPDFC-WSYYQLAKAATQLQQWEDVADAYPKAIQ- 280 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L + + + +K+L N+ W+ ++ +Y +LS+ Sbjct: 281 --LKSDFLEFYLGLSKALFELNR-----------WE-----DLVKLYPLILSQ------- 315 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ +++ +E D A ++ P Sbjct: 316 --------QPDFIKHYYSLAETLIEQECWDAALVIYETIIEHNPS 352 >gi|94967946|ref|YP_589994.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549996|gb|ABF39920.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 566 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 73/274 (26%), Gaps = 14/274 (5%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL + A + A + + YL L L +++ A + LQI Sbjct: 293 GLAFMQAGDGEGAIREFNQALNLKPEDVGYLGNL--GAAYLQLSEFDNAVDNFRKALQIA 350 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + L DL A +A+ + P + E+ A+ Sbjct: 351 PANASLHHDLALTLKLKDDLAGAAAELREAIRLDPKLYDAHYTLGVTLWQQGEFPAAVEE 410 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L ++ L S +LK+ + A A L Sbjct: 411 LEAALAQKPDYAEAYYTLGTVYK----QMNKPRESAEALRSALKIQPDFAGAHTTLAAVL 466 Query: 271 ISQNKKRKAE--VILEKIWKVNPHPEIANIYTH------LLSENTVGKLKRALRLEEINK 322 A + A ++ L + + G + + R E Sbjct: 467 RQLGDTAGASEEARIGAELAKKKTGMQAAVFATNSGIRLLNAGDLDGAVSQFRRATESAP 526 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ G D+A A+ A + P Sbjct: 527 DYAMGHFQLATALSRQGKRDEADAEFSKAATLDP 560 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 11/200 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ GD SA +A + P+ P AV Q + AI + K + Sbjct: 22 VQAYGRGDDASALSSFQQASKLDPNNPEYQNAVGQALFKQGRPAEAIPYFRHALKLRPDL 81 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A++ A+ + ++K+ N + A+ +SL ++ A Sbjct: 82 ----AVIHAYLGQALLADHQADAAISEYRIAVKMAPNEVEANRGLGRSLSTKGDLDGAIA 137 Query: 282 I----LEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + LE + P H ++ ++ ++ V ++ + +++++ + + L Sbjct: 138 VYRSALETNSQSAPLHDDLGSLLA--QKKDFVAAQQQFEQALKLDRQYEPAHFHLGVALL 195 Query: 337 EMGSIDQAHAKAMLAMKIAP 356 +A A+++AP Sbjct: 196 SQDKDPEAMLSLQEAVRLAP 215 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 90/286 (31%), Gaps = 39/286 (13%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFES 164 M S N+ + ++ A + + Q ++ + L + Sbjct: 204 MLSLQEAVRLAPNDVAAHFFLGRVLETLGDNANALQNYKDAAQR-SSEFPGLQERLGLTA 262 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------- 216 R+G++ +A KA+ SP P + + ++ A + AI NQ Sbjct: 263 QRVGEMPTAISAFQKAIAQSPQNPDLHNDLGLAFMQAGDGEGAIREFNQALNLKPEDVGY 322 Query: 217 --------------NAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLK 254 + N +A+ L +L K D+ + + E+++ Sbjct: 323 LGNLGAAYLQLSEFDNAVDNFRKALQIAPANASLHHDLALTLKLKDDLAGAAAELREAIR 382 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVG 309 L A +L Q + A LE + P+ A Y L + Sbjct: 383 LDPKLYDAHYTLGVTLWQQGEFPAAVEELEAA--LAQKPDYAEAYYTLGTVYKQMNKPRE 440 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +I + + ++ + ++G A +A + ++A Sbjct: 441 SAEALRSALKIQPDFAGAHTTLAAVLRQLGDTAGASEEARIGAELA 486 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 2/124 (1%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAIL 228 SA+ AL I PD + + + A + K+ A+ Sbjct: 439 RESAEAL-RSALKIQPDFAGAHTTLAAVLRQLGDTAGASEEARIGAELAKKKTGMQAAVF 497 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + + GD+ + + + + M A +L Q K+ +A+ K Sbjct: 498 ATNSGIRLLNAGDLDGAVSQFRRATESAPDYAMGHFQLATALSRQGKRDEADAEFSKAAT 557 Query: 289 VNPH 292 ++PH Sbjct: 558 LDPH 561 >gi|170571107|ref|XP_001891604.1| U5 snRNP-associated 102 kDa protein [Brugia malayi] gi|158603817|gb|EDP39598.1| U5 snRNP-associated 102 kDa protein, putative [Brugia malayi] Length = 970 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 36/257 (14%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--- 223 GD+ +++ +A +P++ + A V+ E+ RA L + ++ A Sbjct: 650 AGDVKASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLK 709 Query: 224 -----------NRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257 A L+ +LE + + + + +K C Sbjct: 710 SVRLEWCLKDLIAAKKLLMEALEQFPETPKLYLMMGQILQQEKNYSEARRYFSDGVKHCP 769 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--L 315 I I ++ SQN+ KA LEK N P+ + ++ + LK Sbjct: 770 TFIPLWIWLSRLEESQNQTIKARSDLEKARLRN--PKNSELWLEAIRIEARAGLKELAQE 827 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHN 374 RL +E S + ++ A+ M K++ A+K ++ L +A++ Sbjct: 828 RLARALQECEHSGRLWAE-AIFMEERHGRRTKSVDALKKCEHSADVLLAVAKLFWTERK- 885 Query: 375 TDKILYWTQSALHAMPD 391 K W Q + PD Sbjct: 886 IRKAREWFQRTVKIDPD 902 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 12/202 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 ++ A+K+ + F +YL+ QI E+ Y+ A ++ T Sbjct: 719 DLIAAKKL--LMEALEQFPETPKLYLMMGQILQQEKNYSEARRYFSDGVKHCPTFIPLWI 776 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L A+ KA +P + ++ A A L + + Sbjct: 777 WLSRLEESQNQTIKARSDLEKARLRNPKNSELWLEAIRIEARAGLKELAQERLARALQEC 836 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + R A + ++++LK C++S + AK ++ K RK Sbjct: 837 EHSGRLWAEAIFMEERH--------GRRTKSVDALKKCEHSADVLLAVAKLFWTERKIRK 888 Query: 279 AEVILEKIWKVNPHPEIANIYT 300 A ++ K++ P+ + + Sbjct: 889 AREWFQRTVKID--PDFGDAWA 908 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 87/254 (34%), Gaps = 17/254 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTE 192 + A + + + E + + A+ + A +A + + Sbjct: 537 KDAVDAEKANCRLTSQAIISHVLGIGVEEEDRKHTWMEDAESFVAQEAYECARAVY--AH 594 Query: 193 AVVQQYVLAKEWSRA---------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 A++ W A +Q + A E L + + GD+ Sbjct: 595 ALLVFPTKKGIWFAAAHFERNHGTTESYDQLLQKAVEKCPKAETLWLMYAKSKWLAGDVK 654 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 AS + + NS + A K N+ ++A +LEK ++ P P I L Sbjct: 655 ASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLKSVRLE 714 Query: 304 ---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KE 359 + K LE+ E+ + +++ +I + + +A +K P Sbjct: 715 WCLKDLIAAKKLLMEALEQF-PETPKLYLMMGQILQQEKNYSEARRYFSDGVKHCPTFIP 773 Query: 360 IFLLLAQIEQANSH 373 +++ L+++E++ + Sbjct: 774 LWIWLSRLEESQNQ 787 >gi|83945716|ref|ZP_00958061.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633] gi|83850917|gb|EAP88777.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633] Length = 685 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 106/303 (34%), Gaps = 49/303 (16%) Query: 143 LEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVT--EAVVQQ 197 ++ T+ A+ E+ R G +A + L +PD AV Q+ Sbjct: 8 YGDVMSADETQTQALR----EAETHMRKGAFEAALQVLEPVLSDAPDHVDALYMRAVCQR 63 Query: 198 YVLAKEWSRAITFLNQKKKNAKEW---------------NRNRAI--------------- 227 Y+ + A L+ + A E+ +R+RA+ Sbjct: 64 YLKQG--NDARATLDHLLRVAPEFGRGLQEDGHLFRDQGDRDRALGSYRAAVRANPALHA 121 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 A++ A++G + ++ ++ + ++ AA + +N+ KAE L + W Sbjct: 122 AWSAQAQILAEQGRADEARLAQAQADQIKA--LPPALQAAMHHLHENRLLKAEN-LCRSW 178 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQ 343 ++A + + +G L+ A L E + + V +I + + Sbjct: 179 LTQNPKDVAGMRLLAEIGSRLGVLEDAEFLLESAVTFEPGNADLRVDYIRILRKRQKFGK 238 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISDDGYLS 402 A +A P +F+ IE+ + + + + L A DP ++ G+ Sbjct: 239 ALEEAQTLYDRDPDNPVFISQLAIERMQTGDYARAVELFDRVLERAPGDPATLTSRGHAL 298 Query: 403 SVW 405 W Sbjct: 299 KTW 301 Score = 38.0 bits (87), Expect = 4.1, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 86/303 (28%), Gaps = 26/303 (8%) Query: 70 AMLFHMLHKRNYDKGYKAL--YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 L + A + AR + Q L Sbjct: 104 RALGSYRAAVRANPALHAAWSAQAQILAEQGRADEARLAQAQADQIKALP-PAL------ 156 Query: 128 QIA---LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 Q A L E + A L + L R+G L A+ A+ Sbjct: 157 QAAMHHLHENRLLKAENLCRSWLTQNPKDVAGMRLLAEIGSRLGVLEDAEFLLESAVTFE 216 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + ++ +++ +A+ + + + + + + ++E GD Sbjct: 217 PGNADLRVDYIRILRKRQKFGKALEE----AQTLYDRDPDNPVFISQLAIERMQTGDYAR 272 Query: 245 SYHDAIESLKLCDNSIMASIC-AAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302 + L+ A++ +L + + +A + + +P H + +L Sbjct: 273 AVELFDRVLERAPG-DPATLTSRGHALKTWGRSEEAIASYQAACQSDPAHGDAWYGLANL 331 Query: 303 LSENTVGKLKRALRLEEINKESV-ESLV----IVSKIALEMGSIDQA--HAKAMLAMKIA 355 + + ++ E+ ++ + + K + G A + A+K Sbjct: 332 KTYRFDADERAIMQAEDSRPGQPLQTRINLNFALGKAFEDEGDFASAFERYREGNALKTR 391 Query: 356 PRK 358 + Sbjct: 392 QTR 394 >gi|116619356|ref|YP_821512.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222518|gb|ABJ81227.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 759 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 68/231 (29%), Gaps = 9/231 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G A +A+ ++P + A+ + A+ L + + A Sbjct: 484 QSAGVPGEAVAAYERAVQLNPKSVNALRALAAGLSANGQEPSAVETLQRALRLAPA---- 539 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 I + + G + +++ L + S A+ L + A L+ Sbjct: 540 DPITWYRYGMLDFAMGRASDAAIKVRKAIALDPSLPEQSRGLAEILAKMGQPDAARAALD 599 Query: 285 KIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + + +P+ + A + ++ L ++ + Sbjct: 600 EALRTDPYDDAAWNLAGRVLTEKGEMSEAFYDFQKAIQLRPGYAPHLYDLALALVRADRF 659 Query: 342 DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +A +A A+ P LLA + + + + AL PD Sbjct: 660 AEAQDRAEAALLADPNMADAHQLLAGLFARKQQLPEAAREY-RRALELRPD 709 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 86/261 (32%), Gaps = 12/261 (4%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-- 188 + A E +Q+ A+ +L G SA +AL ++P P Sbjct: 484 QSAGVPGEAVAAYERAVQLNPKSVNALRALAAGLSANGQEPSAVETLQRALRLAPADPIT 543 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W ++ + AI + ++R + A G A+ Sbjct: 544 WYRYGMLDFAMGRAS-DAAIKVRKAIALDPSLPEQSR-----GLAEILAKMGQPDAARAA 597 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIAN-IYTHLLSE 305 E+L+ A A + L + + +A +K ++ P P + + + ++ Sbjct: 598 LDEALRTDPYDDAAWNLAGRVLTEKGEMSEAFYDFQKAIQLRPGYAPHLYDLALALVRAD 657 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364 RA + ++ +++ + + +A + A+++ P + L L Sbjct: 658 RFAEAQDRAEAALLADPNMADAHQLLAGLFARKQQLPEAAREYRRALELRPDWSRVHLQL 717 Query: 365 AQIEQANSHNTDKILYWTQSA 385 + A T + ++A Sbjct: 718 GNVLAAQGDITGAAEHLREAA 738 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 65/185 (35%), Gaps = 18/185 (9%) Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A AL ++ V + + A + L ++ K N A + Sbjct: 437 AENALYLA-----VAQVGLANNAQAG-----LPVLAREIARQKPGN---AEFYLVLGKGW 483 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 G + +++L S+ A A L + ++ A L++ ++ P + Sbjct: 484 QSAGVPGEAVAAYERAVQLNPKSVNALRALAAGLSANGQEPSAVETLQRALRLAPA-DPI 542 Query: 297 NIYTHLLSENTVGKLK----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y + + + +G+ + + ++ E +++I +MG D A A A+ Sbjct: 543 TWYRYGMLDFAMGRASDAAIKVRKAIALDPSLPEQSRGLAEILAKMGQPDAARAALDEAL 602 Query: 353 KIAPR 357 + P Sbjct: 603 RTDPY 607 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 62/207 (29%), Gaps = 10/207 (4%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLE 144 +AL GL + N + + + + + + A + + A + + Sbjct: 511 RALAAGLSA----NGQEPSAVETLQRALRLAPADPITWYRYGMLDFAMGRASDAAIKVRK 566 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + P+ E + L ++G ++A+ +AL P + E Sbjct: 567 AIALDPSLPEQS-RGLAEILAKMGQPDAARAALDEALRTDPYDDAAWNLAGRVLTEKGEM 625 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 S A + + + A L +L + A +L N A Sbjct: 626 SEAFYDFQKAIQLRPGY----APHLYDLALALVRADRFAEAQDRAEAALLADPNMADAHQ 681 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP 291 A + + +A + ++ P Sbjct: 682 LLAGLFARKQQLPEAAREYRRALELRP 708 >gi|78067219|ref|YP_369988.1| HemY-like protein [Burkholderia sp. 383] gi|77967964|gb|ABB09344.1| HemY-like protein [Burkholderia sp. 383] Length = 395 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 111/409 (27%), Gaps = 45/409 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V + + S + + + L Sbjct: 3 LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREA---------- 112 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 N L E+ + + A+ A Sbjct: 113 -----------LSVDANQGAASLVAATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAAD 161 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + A + + A + ++ K W + E Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221 Query: 241 DMIASYHDAIESL----KLCDN--------SIMA-------SICAAKSLISQNKKRKAEV 281 + A E+L + + + AA L+ ++ +A Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPVERQSPRLADLAADLLVPLERRNEARR 281 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 I+E N + Y + + +++A ++ + E + L + ++ + Sbjct: 282 IVEDALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLW 341 Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K+A + LA++ + ++ +SAL Sbjct: 342 GKAQSFLESALKLADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|297833104|ref|XP_002884434.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp. lyrata] gi|297330274|gb|EFH60693.1| hypothetical protein ARALYDRAFT_896453 [Arabidopsis lyrata subsp. lyrata] Length = 977 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 89/269 (33%), Gaps = 21/269 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + V Q++ + L L+ + E + P + Sbjct: 67 GDFKQALEHSNMVYQRNPLRTDNL-LLIGAIYYQLQEYDMCIARNEEALRIQP--QFAEC 123 Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y + GD + A RY A+++ P+ + Y+ +S A Q Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRFSEATQCCQQALS 183 Query: 217 NAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + N L+ A+ L + +Y +E++++ +A A + Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIH-------EAYSCYLEAVRIQPTFAIAWSNLAGLFMES 236 Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +A ++ K+ P P+ + N+Y L + ++ + Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKAL--GRPTEAIMCYQHALQMRPNCAMAF 294 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ I E G +D A A+ PR Sbjct: 295 GNIASIYYEQGQLDLAIRHYKQAISRDPR 323 Score = 45.7 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 20/189 (10%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA---VYSLYFESCRIGDLNSAQRYA 177 L L++ Q + A+ ++I T A + L+ E GDLN A +Y Sbjct: 195 LGNLMKAQ-----GLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFME---SGDLNRALQYY 246 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ + P P + Y + AI + N A+ + Sbjct: 247 KEAVKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRP----NCAMAFGNIASIYY 302 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE-- 294 ++G + + +++ + A +L + +A + + P HP+ Sbjct: 303 EQGQLDLAIRHYKQAISRDPRFLEAYNNLGNALKDIGRVDEAIRCYNQCLALQPNHPQAM 362 Query: 295 --IANIYTH 301 + NIY Sbjct: 363 ANLGNIYME 371 >gi|187478787|ref|YP_786811.1| protoheme IX synthesis protein [Bordetella avium 197N] gi|115423373|emb|CAJ49907.1| putative protoheme IX synthesis protein [Bordetella avium 197N] Length = 518 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 107/368 (29%), Gaps = 14/368 (3%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 +P +V I S + + +L A + V + ++ P + +R + Sbjct: 24 HPGNVLILVSPWRIEVSLTLAVLLLVALFAALYVGLRVLAWLVAIPDRVRAWRGRRAQAR 83 Query: 84 GYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNI 138 ++ L G +S+ A K + + Q L L + + ER+ + Sbjct: 84 DHELLERGWISLLEGRFSHAGKDLVKLLEQTKEPGRRVLAALSAARAEHGLSEFERRDQM 143 Query: 139 AHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + E + AT A L + L + A Sbjct: 144 LAKAREEAGEDAGLQEATATVAADMLLDQGQPARALEVLAPLQDGGARHLHTLRLLLRAE 203 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + A + N E A L+ + ++ + LK Sbjct: 204 TALGHQERVFVLARGLARRNALNKTEA----AQLIDSSGAARLRAALGSDAWRGIWKDLK 259 Query: 255 LCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + ++ ++ A + + +A +LE + + Y +E +L + Sbjct: 260 ADERTLPNIALAGAAAFEAAGDHNEAARVLEAAIAQKFNHTLVAAYARCDAEQVPRRLAK 319 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 A + E L + + L QA + + LL + + Sbjct: 320 AETWLQQRPADAEMLTALGLLCLNGQLWGQAERYLQRGVSRRNDAQTHALLGSLYDRLNR 379 Query: 374 NTDKILYW 381 +D +W Sbjct: 380 PSDAARHW 387 >gi|307136430|gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo] Length = 727 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 104/300 (34%), Gaps = 43/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + + E L+ +L+ P + E GD+ +A+ +A Sbjct: 358 AAQLE-KSHGSRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARSILQEAYAA 415 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK---- 239 P++ + A + E RA L + ++ ++ R L NA++ Sbjct: 416 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNAEEESKL 475 Query: 240 ---------------------GDMIASYHDAIES----LKLCDNSIMASICAAKSLISQN 274 + + A E+ LK C + I + A N Sbjct: 476 LSEGLKRFPSFFKLWLMLGQLEERLKHLEKAKEAYESGLKHCPSCIPLWLSLAHLEEKMN 535 Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332 KA +L K NP PE+ + + +E G K A L +E S ++ + Sbjct: 536 GLSKARAVLTMARKKNPQNPELWL--SAVRAELRHGHKKEADILMAKALQECPNSGILWA 593 Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 ++EM Q K+M A+K + +A++ + DK W A+ PD Sbjct: 594 -ASIEMVPRPQRKTKSMDALKKCDHDPHVIAAVAKLFWYDRK-VDKARSWLNRAVTLAPD 651 >gi|256810018|ref|YP_003127387.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] gi|256793218|gb|ACV23887.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] Length = 317 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 89/251 (35%), Gaps = 24/251 (9%) Query: 94 SIAAHNIPLARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ + K Y+ + Q N LV ++ + + A + E + I T Sbjct: 19 ALECADKGNFDKALEYLEKVQKVDKNNPLVLYIKGIVLKLKGDIEDAVKYFEYLETIEKT 78 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALD------ISPDAPWVTEAVVQQYVLAKEWSR 206 ++ +L + G+ +Y K +SP +A++ Y+ E+ + Sbjct: 79 SLLSLGNLICLTFVKGEYEKTLKYIDKLSKLSNSCYLSPFH----KALI--YMEFGEYDK 132 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ L++ K +L +++ + G + + A + LK+ N Sbjct: 133 ALEVLDEFLKIYPNLTS----ILREKAIILENLGRLDEALECANKILKIRRNDAYVWYLK 188 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP---H--PEIANIYTHLLSENTVGKLKRALRLEEIN 321 + L ++A L+ +N H +IA Y L + N L + E Sbjct: 189 GRILKKLGNIKEALDALKIAINLNENLIHVYKDIA--YLELANNNYEDALSHINKYLEKY 246 Query: 322 KESVESLVIVS 332 VE+ ++ Sbjct: 247 PNDVEAKFYLA 257 >gi|294627364|ref|ZP_06705949.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598319|gb|EFF42471.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 690 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 70/221 (31%), Gaps = 8/221 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + + +PD + + + A+ ++ A E Sbjct: 6 LQALRRNAADDAVALAREWVTNAPDHAAAHRWLALALQQQGQPALALDSIDTALTLAPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRITALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + L R E + L + L+ Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378 A +++ P +AQ+ Q D + Sbjct: 182 EHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDAV 222 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 16/292 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + S + + ++LL LA R + A L + + + A Sbjct: 46 GQPALALDSIDTALTLAPEDADLHLLRAGALLATRDLSAADAALSRITALDPNQFNAYVM 105 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + GDL+ A+R + A ++P+ P + VV+ + RA++ L + + Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMR--RGQDDRALSLLTRAAEQ 163 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A +L + K + ++L A+ Q + Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLD 219 Query: 278 KAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A ++ + P ++ + L + +L + Sbjct: 220 DAVAAMQGV-LDQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALL 278 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 +G++D A A+ + L LA I W Sbjct: 279 TAWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330 >gi|190150333|ref|YP_001968858.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915464|gb|ACE61716.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 416 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + +S V I ++ S +++ + + Sbjct: 1 MFRVLFLMLLLLASLIVGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F ++ R + K + GLM ++ + A K+ S ++ +E Sbjct: 61 IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 ++ L++ + A A++ L + G N A A Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160 Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + + P A +++++ + + K++K +N IL Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210 >gi|325925237|ref|ZP_08186645.1| Tfp pilus assembly protein PilF [Xanthomonas perforans 91-118] gi|325544358|gb|EGD15733.1| Tfp pilus assembly protein PilF [Xanthomonas perforans 91-118] Length = 690 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + + +PD + + A+ ++ E Sbjct: 6 LQALRRNAADDAVALAREWVTNAPDHAGAHRWLALALQQQGQPVLALDSIDTALTLTPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ S L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + ++ L R E + L + L+ Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGHSDRALALLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 182 EHFAFAERAFERVIELNP 199 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 80/280 (28%), Gaps = 14/280 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + ++LL LA R + A L + + A + GDL Sbjct: 57 TALTLTPEDADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDL 116 Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A+R + A ++P+ P + VV+ + RA+ L + + + A + Sbjct: 117 DEAERLSRTAARLAPEHPQLLAVDGVVEMRRGHSD--RALALLTRAAEQLPD----DARV 170 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284 L + K + ++L A+ Q + A +LE Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P L + +L + +G++D A Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGAVDDA 290 Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 A+ + L LA I W Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330 >gi|218887935|ref|YP_002437256.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758889|gb|ACL09788.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 807 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 7/199 (3%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G+ AR+ + L L + +E + A + L+ Sbjct: 612 SLGVCMAGLGRHSEARRHFGEALARKPGDPMALYNL--GTVCQSEGEAAEARDCFRKCLR 669 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 +A+ L + A++Y TKA + A + + + A Sbjct: 670 NAPGHVYALIRLGQLAEGEKRFAQARQYYTKAAKLDGGAALTCRHLARLCMRQGRPDEAR 729 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAA 267 L++ + AI L + D G D + A +S+ L + + A Sbjct: 730 EHLHEALLHNP----QDAIALQLMARLYLDGGEDPEIAEVMARQSVALRPDLKQGWLELA 785 Query: 268 KSLISQNKKRKAEVILEKI 286 ++L + + A L + Sbjct: 786 RALQVRGRDHDAREALLRA 804 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 63/212 (29%), Gaps = 29/212 (13%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +++ A L A+Y+L G+ A+ K L +P + Sbjct: 621 GRHSEARRHFGEALARKPGDPMALYNLGTVCQSEGEAAEARDCFRKCLRNAPGHVYALIR 680 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Q K +++A + + K + A+ + +G + E+L Sbjct: 681 LGQLAEGEKRFAQARQYYTKAAK----LDGGAALTCRHLARLCMRQGRPDEAREHLHEAL 736 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVG 309 +A A+ + + PEIA + L + G Sbjct: 737 LHNPQDAIALQLMARLYLDGGED----------------PEIAEVMARQSVALRPDLKQG 780 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSI 341 L+ A L+ ++ + L G Sbjct: 781 WLELARALQVRGRDHD-----AREALLRAGER 807 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 93/344 (27%), Gaps = 41/344 (11%) Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL---EV 127 L + + +G A LM+ A+ + Q L L+ Sbjct: 448 ALIRLSDEGREPEGRAAHPEQLMA------EAAQLCRDLLGPQALGGRYGLNSLIFFHPG 501 Query: 128 QIALAERQYNIAHEKLEMMLQIPATRE-----FAV----YSLYFESCRIGDLNSAQRYAT 178 A A E + R V Y Y ++ + + A YA Sbjct: 502 MTADGTEGAQGARETYAALCDELERRLRIGAAVGVACHPYLSYRKADALENCLKALEYA- 560 Query: 179 KALDISPDAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 L +P + + + AI K + A + + Sbjct: 561 -MLLPAPRVGVLDSLALNISADKRYSLGDTFGAIE--EYKLALLADEGNTMAWNSLGVCM 617 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 G + E+L MA S+ + +A K + P Sbjct: 618 AGL--GRHSEARRHFGEALARKPGDPMALYNLGTVCQSEGEAAEARDCFRKCLRNAP--- 672 Query: 295 IANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 ++Y + KR + +++ + + ++++ + G D+A Sbjct: 673 -GHVYALIRLGQLAEGEKRFAQARQYYTKAAKLDGGAALTCRHLARLCMRQGRPDEAREH 731 Query: 348 AMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A+ P L+A++ + +I A+ Sbjct: 732 LHEALLHNPQDAIALQLMARL-YLDGGEDPEIAEVMARQSVALR 774 >gi|254229658|ref|ZP_04923069.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25] gi|151937857|gb|EDN56704.1| tetratricopeptide repeat domain protein [Vibrio sp. Ex25] Length = 287 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 63/318 (19%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L + + + A + E +++ P Y E+ Sbjct: 4 LALQQLAKDYMVSGFLDRAEKIFEQLVEEPD---------YKEA---------------- 38 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---IARSLENA 237 + +V Y +EW +AI + NQ K + +R RA + ++ + Sbjct: 39 ---------ALQQLVTIYQQTREWEKAIYYANQLAKLGNKRSRMRANIAHFWCEIAMLDQ 89 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK----KRKAEVILE--KIWKVNP 291 G+ + ++L + ASI + + + +LE K + + Sbjct: 90 ADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLESEDYKHTIKYLTGVLEQDKDFISDV 149 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 P IA Y HL E+ + + RA +++ S E ++++++ ++ A Sbjct: 150 LPTIAECYHHLGQEDELVEFLRA-CIDKKAGVSAE--LMLAQLVAHHENVGAAQELLTKQ 206 Query: 352 MKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQSALHAMPD------PLWISDDGYLSS 403 + P + F L I +A + L AM P + S+ Sbjct: 207 LLKNPTMKGFYRLIDYHIAEAE---DGRAKDSLS-TLQAMVGEQLKVKPHYRCRKCGFST 262 Query: 404 V---WLPLSPISKTLCYF 418 W P K Sbjct: 263 HSLYWH--CPSCKGWGTI 278 >gi|40063716|gb|AAR38497.1| TPR repeat protein [uncultured marine bacterium 583] Length = 733 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 14/204 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 Q + A + E + I A +L +G L++A + KA+ I PD Sbjct: 84 TLQDLGQLDAAVKSYEKAIAIKPDYANACNNLGVTLQDLGQLDAAVKSYEKAIAIKPDFS 143 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + A+ + ++ A + +L+N G + A+ Sbjct: 144 DANNNLGIALKNLGQLDAAVECYKKALAIKPDY--AEAHYNLGNALKNL--GQLDAAVEC 199 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ++L + + A +L + + A EK + P+ A Y + + + + Sbjct: 200 YKKALAIKPDYADACNNLGNALKNLGQLDAAVKCYEKAVAIK--PDYAEAYHN--NGSVM 255 Query: 309 GKLKRA-LRLEEINKESVESLVIV 331 +LKR L ES + + Sbjct: 256 RRLKRQDEALAS-----YESAIAI 274 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 13/199 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+L+ A + KAL I PD V + + L + A+ + ++ Sbjct: 52 KTIGELDEAVKSFEKALAIKPDYAEVHYNLGLTLQDL-GQLDAAVKSYEKAIAIKPDY-- 108 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + D G + A+ +++ + + A+ +L + + A Sbjct: 109 --ANACNNLGVTLQDLGQLDAAVKSYEKAIAIKPDFSDANNNLGIALKNLGQLDAAVECY 166 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 +K + P H + N +L + ++ + I + ++ + + Sbjct: 167 KKALAIKPDYAEAHYNLGNALKNLGQLDAA--VECYKKALAIKPDYADACNNLGNALKNL 224 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G +D A A+ I P Sbjct: 225 GQLDAAVKCYEKAVAIKPD 243 >gi|255020673|ref|ZP_05292735.1| TPR repeat-containing protein [Acidithiobacillus caldus ATCC 51756] gi|254969909|gb|EET27409.1| TPR repeat-containing protein [Acidithiobacillus caldus ATCC 51756] Length = 541 Score = 55.7 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 8/244 (3%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 E L YLL + A + +A + +++ + + + R GD + A Sbjct: 19 ALGGETLYYLLTAEFATTQGVAEVALPAWQKAVELAPQANV-LAAATKAATRFGDRSDAL 77 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 R+A + +PD P + E +AI L E A + + Sbjct: 78 RWARLWRETAPDDPEAARFEAALLLAEGEDQKAIALLQATLARFPE----DATVTEQLAA 133 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--- 291 A+ G + + ++ +S A + +++N+ ++A L + + P Sbjct: 134 LLAEHGRRGDAERLLQDFVQHHPDSASAYFNLGRVYLTENRPQEAITALRRASTLQPDDG 193 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 H IA + L+ + +++ ++ + L++G +QA Sbjct: 194 HIAIALAEALRQQQGPTAALQSIQAFTAHHPGDLDAQRYLAALYLQVGGQEQAMRVLQKL 253 Query: 352 MKIA 355 + Sbjct: 254 TRDD 257 >gi|297262050|ref|XP_001101625.2| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Macaca mulatta] Length = 882 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L D A+ Y KAL + P Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLIR---DTAEAKMYYQKALQLHPQ 546 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 607 AGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L + AL Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDVIEKALQLK 781 Query: 389 MPDP 392 DP Sbjct: 782 PKDP 785 >gi|161830756|ref|YP_001597814.1| hemY protein [Coxiella burnetii RSA 331] gi|161762623|gb|ABX78265.1| hemY protein [Coxiella burnetii RSA 331] Length = 392 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 49/379 (12%), Positives = 114/379 (30%), Gaps = 42/379 (11%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + I + + T+ + + L + ++F + + + Sbjct: 21 MTRDTGYLLIVYRHWSIETTLWAAILSLLILFILFYIIFRLLGRAARLSKNIHRWRKMKQ 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 Y + + GL +A P A +K+ LV L A +Q Sbjct: 81 YRRARQLTTAGLCELAEGRWPSAEQKLVKGAK----ITKNPLVNYLAAAQAANAQQSYER 136 Query: 140 HEKLEMML---------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + + + T+ A + +P+ Sbjct: 137 RDNYLRLAHTKAKGSDIAVDLTQS-------RLQISKNQWEQALATLERVNRANPNHACT 189 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA- 249 + + Q YV ++W + L + +K E A +L+ +K + A Sbjct: 190 LQLLKQVYVHLQDWEKLRHLLPRLRKQKVE---------SAEALDAFEKIIYVNLLSAAD 240 Query: 250 ---IESL--------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 ++L + I SLI ++ KA ++E K + + + Sbjct: 241 RKGKQALIAMWNSFPRRSTQEIELIDVYTHSLIKYDEGDKAIPLIESALKKEWNSNLVST 300 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y E +L A + + E + + +++ + +A ++K+ P Sbjct: 301 YGLARGEKKTDQLTTAETWLKKYPKEPELFLCLGRLSRREKFLGKARDYLQTSIKLMPSS 360 Query: 359 EIFLLLAQIEQANSHNTDK 377 + L Q+ + + Sbjct: 361 AAYRELGQVYEEQNQKDSA 379 >gi|303253598|ref|ZP_07339736.1| HemY protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302647518|gb|EFL77736.1| HemY protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 410 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + +S V I ++ S +++ + + Sbjct: 1 MFRVLFLMLLLLASLIVGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F ++ R + K + GLM ++ + A K+ S ++ +E Sbjct: 61 IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 ++ L++ + A A++ L + G N A A Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160 Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + + P A +++++ + + K++K +N IL Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210 >gi|226953435|ref|ZP_03823899.1| tetratricopeptide TPR_4 [Acinetobacter sp. ATCC 27244] gi|226835818|gb|EEH68201.1| tetratricopeptide TPR_4 [Acinetobacter sp. ATCC 27244] Length = 545 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 2/167 (1%) Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R+ + + R+L+ + D+ A+ A ++ + A + + ++ A Sbjct: 51 RSNSTTIKQRALDIALEYDDLQAALDIATHWVEQEPKDVPALFYLSHIALKTHEYELAAK 110 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340 L+KI ++P ++ I + E + L K + L +++ + + G Sbjct: 111 TLDKILNIDPTADLEQILAGIAPEQAEDREILLNALRASKEKNNPSILALIAGLEAQDGL 170 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 +QA A++ + F+L+ + + W A Sbjct: 171 YEQALKNINRALRKRSKSTSFILMKANLLMALKDQEATQKWLARASR 217 >gi|125569818|gb|EAZ11333.1| hypothetical protein OsJ_01197 [Oryza sativa Japonica Group] Length = 867 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 83/248 (33%), Gaps = 25/248 (10%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLY--FESCRIGDLNSAQRYATKALDIS 184 A E+++ ++L T R V L E GD+ +AQ +A Sbjct: 551 AAQLEKRHGTEESLY-ILLSKATTYNRHAEVLWLMYAKEKWLAGDVPAAQTILQEAYAYL 609 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240 P++ + A + E RA L++ ++ ++ R L N D+ Sbjct: 610 PNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELGNVDEERKLL 669 Query: 241 ----------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A A + +A++ ++ + K++A+ +L K + Sbjct: 670 EEEEKINGLRKSRAVLTMARKKNPATPELWLAAV---RAELRHRNKKEADALLAKALQEC 726 Query: 291 PHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 P + ++ + ++ + + V+K+ D+A + Sbjct: 727 PTSGILWAAAIEMVP--RPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKFDKARSWLN 784 Query: 350 LAMKIAPR 357 A+ +AP Sbjct: 785 RAVTLAPD 792 >gi|16082148|ref|NP_394586.1| hypothetical protein Ta1127 [Thermoplasma acidophilum DSM 1728] gi|10640440|emb|CAC12254.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 529 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 17/169 (10%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N++ A ++ + GD + D ++K S+ + A +L + A Sbjct: 22 NKDDAEEFANKAKNAVNSGDYDGAIADIERAIKASPRSVPYHLIKADALYRKGDYEDALD 81 Query: 282 IL---EKIWKVNPHPEIANI----YTHLL--SENTVGKLKRALRLEEINKESVESLVIVS 332 +L E I K N PE+ ++ Y L +E+ + K + + + Sbjct: 82 VLNFAETIEKNN--PELLSLKSICYGSLGKFNESKIEATKAIKA----DPNYPFAYYNRA 135 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 K + D A +++ P + ++ LA +E + K L Sbjct: 136 KAEQYLEEYDIAKKDLQKYLEMQPNDPDAYMDLADMEYHE-GDYKKALQ 183 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 35/192 (18%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD + A +A+ SP + ++ A+ LN + + Sbjct: 36 AVNSGDYDGAIADIERAIKASPRSVPYHLIKADALYRKGDYEDALDVLNFA----ETIEK 91 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N LL +S+ G S +A +++K N A A KAE L Sbjct: 92 NNPELLSLKSICYGSLGKFNESKIEATKAIKADPNYPFAYYNRA----------KAEQYL 141 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 E+ +IA K + E+ ++ + ++ + G + Sbjct: 142 EEY-------DIAK--------------KDLQKYLEMQPNDPDAYMDLADMEYHEGDYKK 180 Query: 344 AHAKAMLAMKIA 355 A A+K Sbjct: 181 ALQHVNTAIKKD 192 >gi|172087340|ref|XP_001913212.1| UDP-N-acetylglucosaminyltransferase [Oikopleura dioica] gi|42601339|gb|AAS21365.1| UDP-N-acetylglucosaminyltransferase [Oikopleura dioica] Length = 1070 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 7/226 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E + Q +T A +L + GD+ A KA+ + Sbjct: 185 GRLEEAEECYQKAXQCNSTXAVAYSNLGCVYNKRGDIWLAIHNFEKAVKLDVTFLDAFIN 244 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ + RA++ + N A++ + ++G + + ++ Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310 +L N A A +L + +AE E+ K++P H + N ++ E T Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ R + + + ++ I + G A A++I P Sbjct: 361 MELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYKQAIRIFP 406 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 47/160 (29%), Gaps = 11/160 (6%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +AL + P+ + A+ + K ++ + Sbjct: 331 EQALKLHPEHADSLNNLANIKREQNRTHEAMELYQRALKAKPDFP----AAHSNLASILQ 386 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 +G + +++++ A + + ++A + +N P A+ Sbjct: 387 QQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISIN--PNFAD 444 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332 +++L S NT ++ + E+ + Sbjct: 445 AFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARA 484 >gi|297475073|ref|XP_002687765.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 1-like [Bos taurus] gi|296487347|gb|DAA29460.1| transmembrane and tetratricopeptide repeat containing 1-like [Bos taurus] Length = 939 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 R A + LQ+ A+++L A ++ P+ Sbjct: 583 LTRDTTEAKMYYQRALQLNPQHNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAY 642 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + + A K + + L + D G + + Sbjct: 643 SSLASLLAEQERFKEAEEIYLAGIKKCPDSSD----LHNNYGVFLVDTGFPEKAVAHYQQ 698 Query: 252 SLKLCDNSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLS 304 ++KL + +A + + S ++A + K ++P + +Y + + Sbjct: 699 AIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTEILSP---LGALYYN--T 753 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363 L+ + E + ++++ MG +A + E + L Sbjct: 754 GRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHIVSEETGCLECYRL 813 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I DK L AL DP Sbjct: 814 LSAIHSKQEQ-HDKALDAIDKALKLKPKDP 842 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 95/286 (33%), Gaps = 43/286 (15%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + ++A E + LQ+ Sbjct: 680 GVFLVDTGFPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGDNSVAEEWYKRALQVA 737 Query: 151 A-TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 T + LY G A + +A+ + P + A+ Q + + Sbjct: 738 RKTEILSPLGALY---YNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQ----- 789 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICA 266 +K + + L R L ++ + + ++LKL I Sbjct: 790 -TKEAEKMTSHIVSEETGCLECYRLLSAIHSKQEQHDKALDAIDKALKLKPK-DPKVI-- 845 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ ++ + + + +L+K ++ E+N + + Sbjct: 846 SELFFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQ 881 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + + + I G+ A A+++ P ++ LA++++ Sbjct: 882 AWMNMGGIQHIKGNYVSARTYYERALQLVPDSKLLQENLAKLDRLE 927 >gi|226939003|ref|YP_002794074.1| HemY [Laribacter hongkongensis HLHK9] gi|226713927|gb|ACO73065.1| HemY [Laribacter hongkongensis HLHK9] Length = 402 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 2/159 (1%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++L+ + + V + + + + S +++ + L A L+ Sbjct: 1 MKLVLWLTALFAVAVGVSLFAGISQGYAILVFPPYRVELSLNLMVVLTIATLLALYLILR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMH-SYVSQQHTFHNE 119 L+ P + H +R AL G ++ A + + + N Sbjct: 61 AFGVALALPDRVRHYQRERKLGAARTALRQGALAFFEGRYQKAEREAVKSLDDEPLEDNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 L L+ + + A + L + + AT E A + Sbjct: 121 TLALLIAARASHAMKDAEKRDAYLSRLSDLGATAELARH 159 >gi|167648925|ref|YP_001686588.1| GSCFA domain-containing protein [Caulobacter sp. K31] gi|167351355|gb|ABZ74090.1| GSCFA domain protein [Caulobacter sp. K31] Length = 533 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 8/204 (3%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L+ S D N A +A+++ P+ P + + + Y A+++ A+ L + Sbjct: 328 LFLSSLSSTDTNERLALAKRAVELEPERPELLDHLGTLYCNAQDFEAAVGVLQRAVDLRP 387 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 +W +A +L+ + + + + +S A+ + SLI + ++A Sbjct: 388 DWEHRY---HLAMALQGVRRFREAGELLEVL--VVENPDSTDAATRLSHSLIILGQAQRA 442 Query: 280 EVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 LE+ P + + + + A + E++ + + + + Sbjct: 443 RAFLEQRIASAPSSALYYWLSTAMGHAGDNADAALMAEKSIELDPGNPHNWYL-AGTYHA 501 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIF 361 + A++IAP + F Sbjct: 502 KANRKAPRPFFEKALEIAPDVKAF 525 >gi|301383072|ref|ZP_07231490.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato Max13] gi|302060343|ref|ZP_07251884.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato K40] gi|302130910|ref|ZP_07256900.1| cellulose synthase operon protein C [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 1298 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 79/250 (31%), Gaps = 51/250 (20%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221 + G L++AQ + L P ++ + A+ L+ ++ + Sbjct: 399 QAGQLDAAQAGYRQVLATQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQSKLGDS 458 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R +A+ + +GD+ A+ +++K +++ A+ + ++ KA Sbjct: 459 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 518 Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302 +++++ K P P++ + + Sbjct: 519 LIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFTRIPVDQRTPDMKALADEVTMTVQ 578 Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L RL+ + S E + ++ ++ G + A A+ Sbjct: 579 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLASAYIDAGEPARGREMARAAIAQ 638 Query: 355 APRKEIFLLL 364 AP L+L Sbjct: 639 APLPSADLML 648 >gi|260060544|gb|ACX30004.1| transmembrane and tetratricopeptide repeat containing 1A [Homo sapiens] Length = 882 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781 Query: 389 MPDP 392 DP Sbjct: 782 PKDP 785 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 738 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870 >gi|90579445|ref|ZP_01235254.1| putative N-acetylglucosaminyl transferase [Vibrio angustum S14] gi|90439019|gb|EAS64201.1| putative N-acetylglucosaminyl transferase [Vibrio angustum S14] Length = 389 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 85/277 (30%), Gaps = 47/277 (16%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T L + + + A E +L P + Sbjct: 83 GEVDRAIRIHQNLIARPNLTIEQRNLALQQLAKDYMVAGFLDRAERIFEQLLDEPEYK-- 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 P + ++ Y +EW AI +Q Sbjct: 141 ----------------------------KPAL----QQLLSIYQQTREWENAIDMASQLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K K ++ A ++ + + ++L + ASI AK I Sbjct: 169 KLGKTKLKHDIAHYWCELAMLEMSAQNQDKAIQCLKKALSADKQCVRASITMAKIQIKGK 228 Query: 275 KKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + ++A LE + P + Y L +E+ LK + E + L Sbjct: 229 EFKQAAKTLERILEQDAEFIGEALPLLLECYEALHNESAW--LKYLQQCVEAKAGASAEL 286 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL 364 ++ +IA G++ A A ++ P + L+ Sbjct: 287 MLADEIAKNEGAVS-AQAFMTRQLQKNPTMKGFYQLM 322 >gi|91976118|ref|YP_568777.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5] gi|91682574|gb|ABE38876.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5] Length = 773 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 32/233 (13%) Query: 129 IALAERQY---NIAHEKL----EMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRY 176 + ER + A + + P R L E+ Sbjct: 558 ASQPERDRVAFDRAASEFVDAQRANAERPEARTMLGNFLTQRGLMSEAEAE--------- 608 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 AL +SP + Y S L + A L A L Sbjct: 609 YRAALSLSPQYATAAINLGDLYRQRGRDSEGEIVLRAALAVSP----RDAALHHALGLNL 664 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 + + + L A +L S ++ +A +L+ + +P +PEI Sbjct: 665 TRLKRPDDALGELQRATDLEPEQPRYPYVYAVALHSSGRRAEAMTVLKGALRTHPNNPEI 724 Query: 296 ANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 ++ +T L A +L + + E ++++ L++ S Sbjct: 725 LRALLSFTQMAGDTPAALGYAEQLAIVTPDDKE----LAEVILKLRSAATPRQ 773 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 12/158 (7%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLE---NADKGDMIASYHDAIESLKLCDNSIMASI 264 ++ + R A AR++ +G M + + +L L A+I Sbjct: 565 RVAFDRAASEFVDAQRANAERPEARTMLGNFLTQRGLMSEAEAEYRAALSLSPQYATAAI 624 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLE 318 + + + E++L V+P H + T L ++ +G+L+RA LE Sbjct: 625 NLGDLYRQRGRDSEGEIVLRAALAVSPRDAALHHALGLNLTRLKRPDDALGELQRATDLE 684 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + G +A A++ P Sbjct: 685 PEQPRYP---YVYAVALHSSGRRAEAMTVLKGALRTHP 719 >gi|285019845|ref|YP_003377556.1| porphyrin biosynthesis protein [Xanthomonas albilineans GPE PC73] gi|283475063|emb|CBA17562.1| putative porphyrin biosynthesis protein [Xanthomonas albilineans] Length = 421 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 64/403 (15%), Positives = 131/403 (32%), Gaps = 34/403 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 LI VI+L + ++ +V + G+ Y S +L L+ Sbjct: 7 LIVLLIVIALGVIGAQWLAQEQLREFGEVIVRVGDTDYIASLPQAGLLLVIAFLLLWLIG 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 V F K++ + L GL+++ A + +Q + Sbjct: 67 NVLSFPFR---AWGRHRRKQSRAR----LIEGLVAVHNGQWTRAERQLDAAAQD---PDV 116 Query: 120 YLVYLLEV-QIALAERQYNIAHEKLEMMLQIPATREFAV---YSLYFE----SCRIGDLN 171 ++ L+ ++A A L + + A + L + + D+ Sbjct: 117 SVIALIAAVRVADARGDAEALERHLHRLAERDACAHALLQAERHLDRKRPVDAINTLDVA 176 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +AQ + L + TEA++Q + + + Q+ L A Sbjct: 177 AAQPLPPRGLLLR------TEALIQISRADEAYGQLGAIRRQQALQLDAIAALETRLATA 230 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKIWKVN 290 + +D + + +SL+ + + ++ AA R E L+ W N Sbjct: 231 SLEQASDANALAERWESLPKSLRSEPDVVGTYALRAAALGWDDATLRSLEQALDTRWDEN 290 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +A +Y L E + A R + + ES L+ ++++A QA Sbjct: 291 ----LAALYGRLPMERYDTRRASAQRWLQDHPESAALLLTLARLARHQQQWPQAEDFLHR 346 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 A+ + E + + A++ +T +AL Sbjct: 347 ALTLGAGAEAWEVFGD-GYADAGDTLAAQRCYANALRVQRGEQ 388 >gi|218710034|ref|YP_002417655.1| tetratricopeptide repeat protein [Vibrio splendidus LGP32] gi|218323053|emb|CAV19230.1| Predicted N-acetylglucosaminyl transferase [Vibrio splendidus LGP32] Length = 392 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 54/291 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + A + E +++ P +E Sbjct: 84 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYTVSGFLDRAEKIFEQLVEEPDHKEG 143 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---TFLN 212 A+ + +V Y +EW++AI L Sbjct: 144 AL----------------------------------QQLVAIYQQTREWNKAIHYGNILV 169 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K + A +++ G+ + ++L + ASI K ++ Sbjct: 170 KLSKKKMKTRAMVAHFWCELAMQEQADGNRPKALQHFKKALSEDPKCVRASIALGKFYLA 229 Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKES 324 K LE + + P +A Y L E + L+ K Sbjct: 230 NEDYHKTITYLESVLEQDIDFISEVLPTLAECYHKLGQE-----AQLVEFLKACIQKKAG 284 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373 V + ++++++ + + A + P + F L +E+A Sbjct: 285 VSAELMLAQLVADHEDVGSAQELLTKQLVKNPTMKGFYRLIDYHLEEAEEG 335 >gi|209524107|ref|ZP_03272658.1| glycosyl transferase family 2 [Arthrospira maxima CS-328] gi|209495482|gb|EDZ95786.1| glycosyl transferase family 2 [Arthrospira maxima CS-328] Length = 2819 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 25/228 (10%), Positives = 71/228 (31%), Gaps = 11/228 (4%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +++ A E + + + +L ++ A + + SP+ V + Sbjct: 178 RWDEAAEAYQNAIALDKDSLILQRNLGKVLVKLSAWEDAVTLWQQVAEKSPNDSEVWHLL 237 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++ WS A+ E++ + + +L ++ + ++ Sbjct: 238 GDALSGSERWSEAVAAYQNAIGLNPEFSGSH--NNLGDALLKLERW--SEAAEAYQNAIG 293 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVG 309 L + +L+ + +A + +NP H + + L + Sbjct: 294 LNPEFFWSHNNLGDALLKLERWSEAAEAYQNAIGLNPEFFWSHNNLGDALLKLERWSEAA 353 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + S +++ +++ + A AM+I P Sbjct: 354 --EAYQNAIAWRDDLPWSHYNLAEALVKLERWEAAVKAYKRAMEIQPD 399 >gi|209525182|ref|ZP_03273725.1| Methyltransferase type 11 [Arthrospira maxima CS-328] gi|209494367|gb|EDZ94679.1| Methyltransferase type 11 [Arthrospira maxima CS-328] Length = 596 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 79/235 (33%), Gaps = 21/235 (8%) Query: 133 ERQYNIAHEKLE-MMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + A + + P ++ + R D A +A+ + P+ Sbjct: 69 AGRLEEAIGAYQQAIKLNPEDSWSYNSLG--GIFIKLERWED---AVPVCQQAIQLDPNF 123 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W + Q ++W A + + + + +L ++ + Sbjct: 124 FWAYNNLGQALSQQEQWEDAASVYQKASQINSTF--FWTYNNWGEALIQLERW--SEAVT 179 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302 +++++ N A +L + A + +K ++NP H +A+ +L Sbjct: 180 VYQKAIEIDPNFCWAYNHLGDALRHLKRWSDAVPVYQKAAEINPNFFWTHSNLADTLVYL 239 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + ++N S ++ ++K ++ +D+A A +++ P Sbjct: 240 KRFDQAIPV--YQSAIKLNPNSPQTYYKLAKCLQKVKRVDEAIAYFQKVLELKPD 292 >gi|116327854|ref|YP_797574.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330738|ref|YP_800456.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120598|gb|ABJ78641.1| Tetratricopeptide repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124427|gb|ABJ75698.1| Tetratricopeptide repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 368 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 5/158 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y+ A + ++ FA+Y L D + A +Y + L+ PD + Sbjct: 201 KDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHKANQYWERILEFDPDNKLIINR 260 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 E+ +A+ N+ +++ L+ ++ G + ++ Sbjct: 261 YADSLRGMGEFDKALECFNKILAEGEDY-----FALLGKASSLKLIGKRDKAEEIYLDLH 315 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 K + + ++ +K +A +LE K P Sbjct: 316 KKFPMDPRPLLELSDLYVAIDKSIEAIRLLEDFQKKQP 353 >gi|301336134|ref|NP_001180380.1| transmembrane and TPR repeat-containing protein 1 isoform 1 [Homo sapiens] Length = 882 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781 Query: 389 MPDP 392 DP Sbjct: 782 PKDP 785 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 738 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870 >gi|299136562|ref|ZP_07029745.1| cellulose synthase operon C domain protein [Acidobacterium sp. MP5ACTX8] gi|298601077|gb|EFI57232.1| cellulose synthase operon C domain protein [Acidobacterium sp. MP5ACTX8] Length = 1516 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 32/321 (9%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPA 151 + A M + + + ++ Q AL A + Sbjct: 314 ARSGGDQDASLMQALSTSRFF------SFMKTGQSALDSDDTTAAIANYRSALALKPDNP 367 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ + R G A Y +A+ + + + + E+S AI+ Sbjct: 368 DALSALGGAF---LRTGHPKDAVPYLERAVRVDSSSSLSWRGLFLAQSQSAEFSAAISTA 424 Query: 212 NQ-----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + + K + +++ ++ + D + + A+ + S A+ Sbjct: 425 ERIPVNLRTKLENDPEFLQSLAADYAAIGQQSQSDHVLTRALALAQADSDNESSTAAQLR 484 Query: 267 -AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-----TVGKLKRALRLEEI 320 A L++ + A + +I + + + ++ L+S + L+ ++ Sbjct: 485 YASLLLAAKRYNTASRVYRRILTTDS--DNGDAWSGLVSSDHLAGRDAEALREFRQMPAS 542 Query: 321 NK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 ++ L +++ I I A A+KIAP I L LA +E ++ Sbjct: 543 VSSTEQDNPGFLSMLAGIYQSQDQISAAREALNRALKIAPSLSIRLQLASMELSSGDKQY 602 Query: 377 KILYWTQSALHAMPD--PLWI 395 + + + P WI Sbjct: 603 AVEEY-ARIVDEHPGSKEAWI 622 >gi|78045739|ref|YP_361914.1| hypothetical protein XCV0183 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034169|emb|CAJ21814.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 690 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + + +PD + + A+ ++ E Sbjct: 6 LQALRRNAADDAVALAREWVTNAPDHAGAHRWLALALQQQGQPVLALDSIDTALTLTPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ S L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + ++ L R E + L + L+ Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGHSDRALALLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 182 EHFAFAERAFERVIELNP 199 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 80/280 (28%), Gaps = 14/280 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + ++LL LA R + A L + + A + GDL Sbjct: 57 TALTLTPEDADLHLLRAGALLATRDLSAADAALSRSTALDPNQFNAYVMQAHLAVARGDL 116 Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A+R + A ++P+ P + VV+ + RA+ L + + + A + Sbjct: 117 DEAERLSRTAARLAPEHPQLLAVDGVVEMRRGHSD--RALALLTRAAEQLPD----DARV 170 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284 L + K + ++L A+ Q + A +LE Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P L + +L + +G++D A Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGAVDDA 290 Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 A+ + L LA I W Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330 >gi|325187990|emb|CCA22532.1| predicted protein putative [Albugo laibachii Nc14] Length = 968 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 13/178 (7%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A + + P R A +L +IG A AL + P Sbjct: 115 ALKETGDIVGAIHFYVKAIQLHP--RFSDAYNNLAVSYMQIGQWQQAIETYKTALTLDPS 172 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + Y + A + + + AI + G + A+ Sbjct: 173 LVDAHSNLGNLYKAQGMYEDAKSCFTDAIRVKPTF----AIAWSNLAGVYQHSGQLDAAI 228 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299 E+++L + + A +L + + + + +K ++ P H +A+ Y Sbjct: 229 IHYQEAIRLAPDFVDAYTNLGNALRESGRLQDSINVYKKAIRIRPDFATAHGNLASAY 286 >gi|124026676|ref|YP_001015791.1| hypothetical protein NATL1_19711 [Prochlorococcus marinus str. NATL1A] gi|123961744|gb|ABM76527.1| Hypothetical protein NATL1_19711 [Prochlorococcus marinus str. NATL1A] Length = 865 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 94/252 (37%), Gaps = 16/252 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A ++I A Y+L +G L A+ KA++I PD Sbjct: 92 GKLKEAELSYRKAIEIKPDYANAHYNLGNILRDLGQLKEAEISLRKAIEIKPDYAVAHSN 151 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A L + + + A D + + +++ Sbjct: 152 LGNVLRDLGKSKEAGLSLRKAIELNPDL----AEAYSNLGNVLRDLEKLKEAELSTRKAI 207 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLK 312 ++ + +A LI +K ++AE+ L K ++N P++A Y++L + +GKLK Sbjct: 208 EIKPDYAVAHYNLGTILIDLDKLKEAELSLRKAIELN--PDLAEAYSNLGNVLRDLGKLK 265 Query: 313 RAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-----LL 363 A + EI + E+ + I +G + +A + A++I P + + Sbjct: 266 EAELSTRKAIEIKPDYAEAHSNLGGILSNLGKLKEAEISSRKAIEIKPDYGVAYSNLGTI 325 Query: 364 LAQIEQANSHNT 375 L I ++ Sbjct: 326 LKDIGKSQEAFD 337 >gi|189235894|ref|XP_967579.2| PREDICTED: similar to AGAP006254-PA [Tribolium castaneum] Length = 1086 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 158 EALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYITALQYNPDLYCVRSDLG 215 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L G++ A + K Sbjct: 216 NLLKA-----LGRLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 267 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 268 AVGLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 323 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + +++L N A A +L + + +AE ++ P H + N Sbjct: 324 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLCPSHADSLNN 383 Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E +L LE E + ++ + + G +++A A++I Sbjct: 384 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 441 Query: 355 APR 357 P Sbjct: 442 QPT 444 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 358 GQVAEAEECYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 414 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ S A+ + + Sbjct: 415 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQ 474 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 475 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 524 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 293 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 352 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + + A N + + A L + ++G + + +++L++ Sbjct: 353 ALKEKGQVAEAEECYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 408 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 409 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDVSGAL 466 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 467 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 512 >gi|319785704|ref|YP_004145179.1| hypothetical protein Psesu_0085 [Pseudoxanthomonas suwonensis 11-1] gi|317464216|gb|ADV25948.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 688 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 80/265 (30%), Gaps = 42/265 (15%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G + A A + PD + + + I A Sbjct: 9 LANGAIEQALELARQWTAAEPDLAAAHRTLAHVLARSGD----IAAALVALDLAAALAPE 64 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + R+L +GD A+ ++L L N + A + A+ I ++ +A +L Sbjct: 65 DAGVHHDRALLLVREGDTAAAQAALGQTLGLDPNHLPAYLAQARLAIGLDQLDEATRLLR 124 Query: 285 KIWKVNP-HPE--------------------IANIYTHLLSENT---------------- 307 +++P HP+ +A L ++ Sbjct: 125 TASRIDPDHPQLLALDGLLALRLGNHSRALVLATSAAKALPDDPQVLSVMGFAHAAQGQL 184 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQ 366 + R+ + ++ +++++ G D+A A + A LL + Sbjct: 185 AFAEQAFRRVAGLVPDARPLQPLLARLVAAQGRADEAAALMEPLLDEAAAPTPALLRVGG 244 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 I D+ W AL A P Sbjct: 245 IYALQGGRHDQARQWLGRALDARPG 269 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 77/243 (31%), Gaps = 19/243 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI- 149 G A + A + V+ L LL ++ A+ + + A +E +L Sbjct: 175 GFAHAAQGQLAFAEQAFRRVAGL-VPDARPLQPLL-ARLVAAQGRADEAAALMEPLLDEA 232 Query: 150 --PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P V +Y + + G + A+++ +ALD P A++ + + A Sbjct: 233 AAPTPALLRVGGIY--ALQGGRHDQARQWLGRALDARPGDTEALRALMALWAGTNDQEDA 290 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 L + + +LE E++ + A A Sbjct: 291 RATLERLLQVDP---SQSMAWAARVALEQPATAAAAEVLARWQEAM---PGHVPALEAAF 344 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS---ENTVGKLKRALRLEEINKE 323 + ++ + P HP A + + S E+ L RA ++ E E Sbjct: 345 FNADRSGDLEATRAAAARLLEAVPEHP--AALQFEVESQLVEDPDTALARARQILEAAPE 402 Query: 324 SVE 326 E Sbjct: 403 GAE 405 >gi|293390859|ref|ZP_06635193.1| HemY protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951393|gb|EFE01512.1| HemY protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 416 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 13/170 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ ++ + + +S V I + + S I +++ FF+ A L+++ Sbjct: 1 MVRVLFLMLLLLAGLIAGPYLSGKQGYVRIETASNIIEMS---ITTLVIFFVIALALVYS 57 Query: 61 V---SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 + F + +R K K GLM + + A K+ ++ Sbjct: 58 IEVAISRFFRLSNNTYSWFSRRKRAKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SD 115 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 L ++ + A A+ L I AT SL E R Sbjct: 116 EPVLNFIKAAEAAQQRGDEFSANRYL-----IEATEIAGSDSLILEIART 160 >gi|86148761|ref|ZP_01067033.1| putative heat shock protein [Vibrio sp. MED222] gi|85833458|gb|EAQ51644.1| putative heat shock protein [Vibrio sp. MED222] Length = 391 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 54/291 (18%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + A + E +++ P +E Sbjct: 83 GEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYTVSGFLDRAEKIFEQLVEEPDHKEG 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---TFLN 212 A+ + +V Y +EW++AI L Sbjct: 143 AL----------------------------------QQLVAIYQQTREWNKAIHYGNILV 168 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K + A +++ G+ + ++L + ASI K ++ Sbjct: 169 KLSKKKMKTRAMVAHFWCELAMQEQADGNRPKALQHFKKALSEDPKCVRASIALGKFYLA 228 Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKES 324 K LE + + P +A Y L E + L+ K Sbjct: 229 NEDYHKTITYLESVLEQDIDFISEVLPTLAECYHKLGQE-----AQLVEFLKACIQKKAG 283 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373 V + ++++++ + + A + P + F L +E+A Sbjct: 284 VSAELMLAQLVADHEDVGSAQELLTKQLVKNPTMKGFYRLIDYHLEEAEEG 334 >gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Lyngbya majuscula 3L] gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Lyngbya majuscula 3L] Length = 1427 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 66/204 (32%), Gaps = 13/204 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + + +++ A +L G L A +A+ + PD Sbjct: 105 GELDKAVQYYQEAIKVKPDYAVAHNNLGNLLHNQGKLGEAVHCYQEAIRVKPDYAQAYCN 164 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + A + K + + L +G + A+ E++ Sbjct: 165 LGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTL----FQTQGKLDAARESYQEAI 220 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L Q K +A ++ ++ P+ A +Y +L + K Sbjct: 221 RLKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIRLK--PDFAEVYNNL-GNTLHEQCKL 277 Query: 314 ALRLEEI------NKESVESLVIV 331 L+ N E+ + + Sbjct: 278 EEALQSYQQALSINPNLAEAKLAM 301 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 46/143 (32%), Gaps = 11/143 (7%) Query: 127 VQIA-------LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 Q + + + A E + +++ A A +L G L++A+ + Sbjct: 159 AQAYCNLGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTLFQTQGKLDAARESYQE 218 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + PD + + A+ + + ++ A + ++ Sbjct: 219 AIRLKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIRLKPDF----AEVYNNLGNTLHEQ 274 Query: 240 GDMIASYHDAIESLKLCDNSIMA 262 + + ++L + N A Sbjct: 275 CKLEEALQSYQQALSINPNLAEA 297 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 80/240 (33%), Gaps = 26/240 (10%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q+ + Y + ++ S++ E + L A +AL + PD Sbjct: 36 QVIQIQGDYQGEEKS--LLKPYNVIAIANFASIFEEKNK---LEEAVALYQQALTLKPDF 90 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V + + E +A+ + + K ++ A+ ++G + + H Sbjct: 91 AEVHNNLGNIFWAKGELDKAVQYYQEAIKVKPDY----AVAHNNLGNLLHNQGKLGEAVH 146 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIY--- 299 E++++ + A L Q K A ++ K+ H + ++ Sbjct: 147 CYQEAIRVKPDYAQAYCNLGNVLQVQGKLDAARESYQEAIKLKADCFQAHNNLGTLFQTQ 206 Query: 300 --THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E+ ++ + + ++ + I + G +++A A+++ P Sbjct: 207 GKLDAARESYQEAIR-------LKPDYADAHNNLGTILQKQGKLEEAVQSYQEAIRLKPD 259 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 30/224 (13%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A QY+ A + ++ A +SL G L+ + + L I P+ Sbjct: 818 AQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNLCQGQGQLSDSVECYQRVLTIQPNLVP 877 Query: 190 VTEAVVQQYVLAKEWSRAIT---------------------FLNQKKKNAKEWNRNRAIL 228 V + W AI L+ ++K A E + A L Sbjct: 878 VYNNLGYALQQQGNWDDAIASYQQALEIEPTCTEADVNLGNALHAQEKLALEKQAHYAQL 937 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + GD+ + +++ + + + A L Q + A +K+ + Sbjct: 938 NHELGVTRQKAGDLTNAVAYYRQAVAMQSDLVSAHYNLGVVLQDQGEFENAIASYQKVLE 997 Query: 289 VNPHPEIANIYTHLLSENTVGKL-KRALRLEEINKESVESLVIV 331 +N P +Y +L G++ + +LEE + L++V Sbjct: 998 LN--PSYGEVYFNL------GRIYQTQKQLEEAASAYRQGLMLV 1033 >gi|312085220|ref|XP_003144592.1| U5 snRNP-associated protein [Loa loa] gi|307760244|gb|EFO19478.1| U5 snRNP-associated protein [Loa loa] Length = 970 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 90/257 (35%), Gaps = 36/257 (14%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--- 223 GD+ +++ +A +P++ + A V+ E+ RA L + ++ A Sbjct: 650 AGDVKASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLK 709 Query: 224 -----------NRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257 A L+ +LE + + + + +K C Sbjct: 710 SVRLEWCLEDLIAAKKLLTEALEQFPETPKLYLMMGQILQQEKNYNEARQYFSDGVKHCP 769 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--L 315 I I ++ SQN+ KA LEK N P+ + ++ + LK Sbjct: 770 TFIPLWIWLSRLEESQNQIIKARSDLEKARLRN--PKNSELWLEAVRIEARAGLKELAQE 827 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHN 374 RL +E S + ++ A+ M K++ A+K ++ L +A++ Sbjct: 828 RLARALQECEHSGRLWAE-AIFMEERHGRRTKSVDALKKCEHNADVLLAVAKLFWTERK- 885 Query: 375 TDKILYWTQSALHAMPD 391 K W Q + PD Sbjct: 886 IRKAREWFQRTVKIDPD 902 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 88/253 (34%), Gaps = 15/253 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTE 192 + A + + + E + + A+ + A +A + + Sbjct: 537 KDAVDAEKANCRLTSQAIISHVLGIGVEEEDRKHTWMEDAESFVAQEAYECARAVY--AH 594 Query: 193 AVVQQYVLAKEWSRA---------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 A++ W A +Q + A E L + + GD+ Sbjct: 595 ALLVFPTKKGIWFAAAHFERNHGTTESYDQLLQKAVEKCPKAETLWLMYAKSKWLAGDVK 654 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 AS + + NS + A K N+ ++A +LEK ++ P P I L Sbjct: 655 ASREILARAFQNNPNSEEIWMAAVKLESENNEFQRARKLLEKAREIAPSPRIYLKSVRLE 714 Query: 304 --SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360 E+ + K E E+ + +++ +I + + ++A +K P + Sbjct: 715 WCLEDLIAAKKLLTEALEQFPETPKLYLMMGQILQQEKNYNEARQYFSDGVKHCPTFIPL 774 Query: 361 FLLLAQIEQANSH 373 ++ L+++E++ + Sbjct: 775 WIWLSRLEESQNQ 787 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 12/202 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 ++ A+K+ F +YL+ QI E+ YN A + ++ T Sbjct: 719 DLIAAKKL--LTEALEQFPETPKLYLMMGQILQQEKNYNEARQYFSDGVKHCPTFIPLWI 776 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + A+ KA +P + V+ A A L + + Sbjct: 777 WLSRLEESQNQIIKARSDLEKARLRNPKNSELWLEAVRIEARAGLKELAQERLARALQEC 836 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + R A + ++++LK C+++ + AK ++ K RK Sbjct: 837 EHSGRLWAEAIFMEERH--------GRRTKSVDALKKCEHNADVLLAVAKLFWTERKIRK 888 Query: 279 AEVILEKIWKVNPHPEIANIYT 300 A ++ K++ P+ + + Sbjct: 889 AREWFQRTVKID--PDFGDAWA 908 >gi|257093625|ref|YP_003167266.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046149|gb|ACV35337.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 925 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 17/305 (5%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + + + + N+ A++ + + I A +Y+ A Sbjct: 129 EARADVLVSQAFVHLFTGNVEAAKQTVQQA--FEASPDYPRAAIARAVITGAAGEYDAAS 186 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 ++ +L A+ + + GDL A + + P + Sbjct: 187 LAIDQVLSRQPKSVEALRAKASIAQSKGDLAGAIQALQALTQVRPSDVAAHYTAIMLLWQ 246 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A A L + A+E R +L +L D+ + +LK + Sbjct: 247 AGRVDDARAQLAAMVEAAEEHPRTEHVL----ALMAIRDRDLNEARDHVALALKGDPEFV 302 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-- 318 + + + AE L K+ NP + + +L+RAL L Sbjct: 303 PTLLLSGTLNAEMGEYELAEKDLSKVLMRNPG-NLPAQQALIGVLLRTQRLERALALAQE 361 Query: 319 --EINKESVESLVIVSKIALEMGSIDQAH---AKAMLAMKIAPRKEIFLLLAQIEQANSH 373 E +L + + + L+ G +A +A P+ L LA++ Sbjct: 362 MVARAPEEPRALSVAAMVYLKAGDAKKAQSLFEQANALGGKTPKALTGLALARLA---GG 418 Query: 374 NTDKI 378 + + Sbjct: 419 DAGQA 423 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 99/307 (32%), Gaps = 13/307 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 LM+I ++ AR LL + +Y +A + L +L Sbjct: 275 ALMAIRDRDLNEAR--DHVALALKGDPEFVPTLLLSGTLNAEMGEYELAEKDLSKVLMRN 332 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A +L R L A A + + +P+ P Y+ A + +A + Sbjct: 333 PGNLPAQQALIGVLLRTQRLERALALAQEMVARAPEEPRALSVAAMVYLKAGDAKKAQSL 392 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 Q + + L +L GD + + +E+ + + A + Sbjct: 393 FEQANALGGKTPK----ALTGLALARLAGGDAGQAINVLMEASAVDAAGVEADVLLVNHF 448 Query: 271 ISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + + KA +L + + P + ++ R E+ + + Sbjct: 449 VGSKQFDKALEVLAIMARKRPGDARILTLEGEVLIAAGRRAEARVA-FERAYELRPDLIT 507 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +L + ++ L G ++A + A+ P + L A+ + D + + A Sbjct: 508 ALRHLGRLDLADGKPERAKKRFEDAVAGRPKDASVLLAYAEWLNDSKSEPDSVRATIEKA 567 Query: 386 LH-AMPD 391 + A D Sbjct: 568 VAVAPTD 574 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 79/259 (30%), Gaps = 14/259 (5%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A + + M + L R G + A KA++++P +P + + Sbjct: 597 AAEQATKAMPASARLQTV----LGELQIRAGKADLAAATLAKAIELAPASPELLVRLADL 652 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + A L + + L + + + A E K Sbjct: 653 QLAGGAVDAAKGSLRKALTLRPGFRPATVRL----AALDQQPARPADAIEAARELQKSQP 708 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRAL 315 + + K+L+ Q K +A +L+ + + P++ A + S + A Sbjct: 709 SDPIGYFLEGKALVQQEKWPEAIRVLKAGIERSNSPQLVVALHSALVKSGRAEEASRAAA 768 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + + V ++ +AL A + + + LA A Sbjct: 769 DWIKAHPKDVVVRSYLADLALAARDYPAAVRIYKDVVVDVPNNLRALNNLA--WAAGRAG 826 Query: 375 TDKILYWTQSALH-AMPDP 392 L + + A A DP Sbjct: 827 DPMALDYAERASRLAPEDP 845 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 58/215 (26%), Gaps = 35/215 (16%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 +E + + T A SL D ++A A +A P + + + + + Sbjct: 561 RATIEKAVAVAPTDVNARLSLVAFHASRRDFDAAMVAAEQATKAMPASARLQTVLGELQI 620 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A + A L + + A LL+ + G + A+ ++L L Sbjct: 621 RAGKADLAAATLAKAIELAPASPE----LLVRLADLQLAGGAVDAAKGSLRKALTLRPGF 676 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 A++ A ++ A L++ Sbjct: 677 RPATVRLAAL-------------------------------DQQPARPADAIEAARELQK 705 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + K ++ +A ++ Sbjct: 706 SQPSDPIGYFLEGKALVQQEKWPEAIRVLKAGIER 740 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 5/129 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +ALA R Y A + ++ A+ +L + + R GD A YA +A ++P+ Sbjct: 785 ADLALAARDYPAAVRIYKDVVVDVPNNLRALNNLAWAAGRAGDPM-ALDYAERASRLAPE 843 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P V + + V + +R L + A R + + GD + Sbjct: 844 DPKVLDTLGWILVERGDLARGTDILRRASTAAPNAPDLR----LNLAKALIKSGDAKGAR 899 Query: 247 HDAIESLKL 255 + KL Sbjct: 900 RELEVLAKL 908 >gi|270264222|ref|ZP_06192489.1| cellulose synthase subunit [Serratia odorifera 4Rx13] gi|270041871|gb|EFA14968.1| cellulose synthase subunit [Serratia odorifera 4Rx13] Length = 1146 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 104/330 (31%), Gaps = 35/330 (10%) Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 N + L + N + + +E AL Sbjct: 305 YSRAGNRPQALSLFRQALQADKGGNNSSKWQSLIKSNAYWLAIDE-------GDKALKAG 357 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +A +K + QI A L + D +A+RY +AL + P + Sbjct: 358 NLALAQQKYQQAGQIDGRDSSAALGLGDVAVARKDDAAAERYYQQALRLEPGNGSAVRGL 417 Query: 195 VQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 V Y +A+ +LN Q+ K + + +L ++ + A + + Sbjct: 418 VNIYQRQSP-EKALAYLNSLPRSQQNKLRSTLDGLQLDMLKQQADDLAGQQQWHQAAEKY 476 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYTHLLSENTV 308 + + + + + A++L + ++A+ + + K +P+ A Y LS + Sbjct: 477 RRAQLMDPDDVWLTYHYAQTLRQAGQPQQADALFSRLAQKQRDNPQQAYAYALYLSGSDR 536 Query: 309 GK--LKRALRL--EEINKESVE--------SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + L + N E +++ ++ G A A + Sbjct: 537 DRQALAQLNTLPAAQWNDNMRELAQRLKMQAMLEQAERLRAAGDEPGAVAYLR---RQPA 593 Query: 357 RKEIFLLLAQ--IEQAN----SHNTDKILY 380 I L LA + + + ++ Sbjct: 594 DTRIDLQLADWALARGEYDAALADYQRVRA 623 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 54/396 (13%), Positives = 114/396 (28%), Gaps = 80/396 (20%) Query: 69 PAMLFHMLHKRNYDKG----------------YKALYTGLMSIAAHNIPLARKMHSYVSQ 112 P L DKG + A+ G ++ A N+ LA++ + Q Sbjct: 312 PQALSLFRQALQADKGGNNSSKWQSLIKSNAYWLAIDEGDKALKAGNLALAQQKYQQAGQ 371 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + + L +A+A + A + L++ AV L R Sbjct: 372 IDGRDSSAALGL--GDVAVARKDDAAAERYYQQALRLEPGNGSAVRGLVNIYQRQS-PEK 428 Query: 173 AQRY------------------------ATKALDISPDAPWVTEAVVQQYVLAKE----W 204 A Y +A D++ W A + + W Sbjct: 429 ALAYLNSLPRSQQNKLRSTLDGLQLDMLKQQADDLAGQQQWHQAAEKYRRAQLMDPDDVW 488 Query: 205 -----------------SRAI-TFLNQKKKNAKEWNRNRAILLIA--RSLENADKGDMIA 244 + A+ + L QK+++ + A+ L R + + + + Sbjct: 489 LTYHYAQTLRQAGQPQQADALFSRLAQKQRDNPQQAYAYALYLSGSDRDRQALAQLNTLP 548 Query: 245 SYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHP-----EIANI 298 + +L M ++ A+ L + + A L + P ++A+ Sbjct: 549 AAQWNDNMRELAQRLKMQAMLEQAERLRAAGDEPGAVAYL----RRQPADTRIDLQLAD- 603 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APR 357 + E L R+ + ++ + + + G + +A + + P Sbjct: 604 WALARGEYDAA-LADYQRVRAREPNNPDARLGEIEAYVAQGKLSEARQRLQTEPQAPEPS 662 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +A A +T+ A +P Sbjct: 663 SNSGRRMANAWYAVGEPQKASDIFTRLKTAAQQEPA 698 Score = 37.6 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 74/233 (31%), Gaps = 25/233 (10%) Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEV-----Q 128 + + Y L + + A A V L L V Q Sbjct: 184 FSQDRDAQAYDLL-QKVAADPAGRGDAADLWLEKVKAMPVSPQSVAALNRFLGVFETGDQ 242 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + +A + + +L P T V L G +A KAL SP+ Sbjct: 243 A--VSARQELARQ--QALLSDP-TYLARVRGLAQ--VDKGGSRAAIPELKKALAASPNDA 295 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAI-------LLIARSLENAD 238 V A+ Q Y A +A++ Q + ++ +++ L I + Sbjct: 296 EVLGALGQAYSRAGNRPQALSLFRQALQADKGGNNSSKWQSLIKSNAYWLAIDEGDKALK 355 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 G++ + ++ ++ A++ +++ AE ++ ++ P Sbjct: 356 AGNLALAQQKYQQAGQIDGRDSSAALGLGDVAVARKDDAAAERYYQQALRLEP 408 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 40/142 (28%), Gaps = 12/142 (8%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + A A L L + G+ ++A + Sbjct: 567 AMLEQAERLRAAGDEPGAVAYLRRQPADTRIDLQ----LADWALARGEYDAALADYQRVR 622 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------WNRNRAILLIARS 233 P+ P ++ YV + S A L + + + N A+ ++ Sbjct: 623 AREPNNPDARLGEIEAYVAQGKLSEARQRLQTEPQAPEPSSNSGRRMANAWYAVGEPQKA 682 Query: 234 LENADKGDMIASYHDAIESLKL 255 + + A A ++ L Sbjct: 683 SDIFTRLKTAAQQEPAGQAKAL 704 >gi|121997361|ref|YP_001002148.1| hypothetical protein Hhal_0560 [Halorhodospira halophila SL1] gi|121588766|gb|ABM61346.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila SL1] Length = 389 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 64/180 (35%), Gaps = 11/180 (6%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R +A+ +L + + G + A++ + ++ Sbjct: 84 GEVDRAIRIHQNLIARPSLTRRQRTYALLALGEDYMKAGVFDRAEKLFQEVVEQDAHVEQ 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y +EW RAI + ++ + ++ L ++ +G + Sbjct: 144 ALRRLLTIYEHEREWDRAIETAERLEQVGEGDYRVRIGQLRCEQAAHALARGYTEHARKA 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PE----IANIYTHL 302 +L + A++ + + A E + + +P PE +A Y L Sbjct: 204 LRRALSADPDCARANMLLGDLERELGRYKAAVKAYEAVGQQDPALLPEVLDGLAAAYRGL 263 >gi|298506099|gb|ADI84822.1| TPR domain lipoprotein [Geobacter sulfurreducens KN400] Length = 896 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 91/286 (31%), Gaps = 32/286 (11%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 H + + D+ L GL + L M A+ Sbjct: 443 HYMRQHRSDRALATLKEGLTGT-KGDASLYNTM----------------------AAIMF 479 Query: 134 RQYNIAHE-KLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A K M + +L GDL+ A ++ + P Sbjct: 480 NERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDGAIAEYSRMVQEDPHNLRAI 539 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + L A+ + + + + +A + + KG++ + + Sbjct: 540 LGLASLSELKGREGDALAWYTKARDTGEYAG------YLALAGYHEKKGNLDKALAVLDD 593 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGK 310 ++K + A + + L++Q K + A + + + P +A + + + + Sbjct: 594 AVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKA 653 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ A R + ++ I++ + E G + +A + ++ P Sbjct: 654 IEEARRAVTLKPDAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEP 699 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 77/235 (32%), Gaps = 7/235 (2%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A +Y A ++ +L+ ++ V L + A A K L +P Sbjct: 66 AKAYQALGKYEQAEKEYLKVLKQNPSKTDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPG 125 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + E + Y L + A + KE R A L +A L + Sbjct: 126 SAEALEVLGLGYALKGMPAEAERNFLLALE--KEPRRTSAKLQLAVLLMEQKSSREKEAR 183 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----L 302 E L ++ A A +S + +A I K+ + P + A +Y L Sbjct: 184 ALIDEILTADPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPG-DPAPLYRQGVILL 242 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 K A L + + E + IA + + A ++KIAP Sbjct: 243 EKGEMDKAEKTAETLVQKFPQKSEGARLKGLIAYQRKNYADAITALQTSVKIAPS 297 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 95/303 (31%), Gaps = 44/303 (14%) Query: 69 PAMLFHMLHKRN----YDKGYKAL-----------YTGL---MSIAAHNIPLARKMHSYV 110 P + K KG A+ GL ++ A+ + Sbjct: 599 PRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKAIEEAR 658 Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + + + + A ++++ L+ A L R G+ Sbjct: 659 RAVTLKPDAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEPGNVGAAMQLGEYLGRNGNT 718 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRA 226 +A L +P+ A + + A L + + A N Sbjct: 719 AAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLEKAESFAPALNN--- 775 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + G + A+ +LK + + +L+ + +A ILEK+ Sbjct: 776 -LAFLYAEGY---GPREEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAVKILEKV 831 Query: 287 WKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEI--NKESVES---LVIVSKIAL 336 K+ P +P +A Y +T + + A L+E + ES +++++++ Sbjct: 832 VKLMPSNPAVRYHLALAYR-----DTGDRARAATTLQEALNQGDFPESGQARIMLAELSG 886 Query: 337 EMG 339 G Sbjct: 887 AAG 889 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 12/235 (5%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 ++ G + A+ T A+ ++P+ + Y+ RA+ L K Sbjct: 407 GIFN--LSKGRVREAESDFTTAVRVAPEMLNSRLVLAFHYMRQHRSDRALATL----KEG 460 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A L + ++ + + K + A A S Sbjct: 461 LTGTKGDASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDG 520 Query: 279 AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A ++ + +PH + L L + + + ++ Sbjct: 521 AIAEYSRMVQEDPHNLRAILGLASLSELKGREGDALAWYTK--ARDTGEYAGYLALAGYH 578 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDKILYWTQSALHAM 389 + G++D+A A A+K PR ++ +I A D I +T A Sbjct: 579 EKKGNLDKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAP 633 >gi|241668110|ref|ZP_04755688.1| hypothetical protein FphipA2_05034 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876645|ref|ZP_05249355.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842666|gb|EET21080.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 385 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 32/76 (42%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+++ V+ L I + + + ++ + + + +++ LF + F Sbjct: 1 MIRILKLIIVVVLATLIGIWATKNHGYIMLVMADKAIKVNLVAFVFVVFILLFVLVFGFR 60 Query: 61 VSRFFLSCPAMLFHML 76 V + P +LF+ Sbjct: 61 VIKLSFQLPYLLFNWF 76 >gi|158425090|ref|YP_001526382.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571] gi|158331979|dbj|BAF89464.1| TPR repeat protein [Azorhizobium caulinodans ORS 571] Length = 779 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 98/298 (32%), Gaps = 23/298 (7%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 AL G + A + A ++++ ++ +V + + Sbjct: 53 DGGRLKSAKDALRAGTLH-QAGDHKGAAQLYAASLKRD--PKNPIVQHMYALCLRQIGRI 109 Query: 137 NIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A L + + A Y ++GD +A+ KAL + P+ P + Sbjct: 110 PEAVAALRISTALDPRNVEALADYGSLL--LQMGDRAAAREAFEKALALRPNHPVAKAGI 167 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + + + ++ N +A L + ++ + G+ + +E+++ Sbjct: 168 ARLSAVDGSLDDLLRTVAEQPGNG------QAALALGCAI-ISSGGEPDDAAKVWVEAVQ 220 Query: 255 LCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308 I + + R+A +L+ + P H + I Sbjct: 221 RGA-LTPEDIGIEGVNAYRGGRDREALALLKIAATLKPTVAALHANLGMILLEKRRH--A 277 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 ++ +++ V +L+ + + L+ + +A A +KI P + L A Sbjct: 278 EAMEALGEALKVDPNHVGALLNLGSVCLDRKAYPEALAYLNRVLKIEPDNVVARLGAA 335 >gi|171691775|ref|XP_001910812.1| hypothetical protein [Podospora anserina S mat+] gi|170945836|emb|CAP72637.1| unnamed protein product [Podospora anserina S mat+] Length = 913 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 85/259 (32%), Gaps = 33/259 (12%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G++N A+R +A +PD + A V+ +A L ++NA Sbjct: 587 LMLAREKAGEINEARRVLARAFKQNPDNEDIWLAAVKLEADNGFIDQARDLLKTARQNAP 646 Query: 220 EWNRNRAILLIARSLENADKG-----------------------------DMIASYHDAI 250 + R L N++ + Sbjct: 647 TDRVWMRSVAFERQLGNSEAALDLVIDALRLFPNAPKLWMMKGQIYEDMDQPAQAREAYG 706 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 ++ +S+ + ++ N KA +L++ + P+ A ++T + E G Sbjct: 707 AGVRAVPSSVPLWLLYSRLEERLNNVVKARSVLDRARQAV--PKSAELWTELIRLERRAG 764 Query: 310 KLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + +A L + +S ++ ++ L + Q + AMK + ++ A Sbjct: 765 NITQAKTLMATALQQMPKSGLLWAERILHLEQRTQRKSLLAEAMKKVENDPVLMVTAAYI 824 Query: 369 QANSHNTDKILYWTQSALH 387 ++ W + AL Sbjct: 825 LWKERKLEQADKWFERALK 843 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 5/163 (3%) Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + +R L + + + + + +L++ NS + A K Sbjct: 507 GLDEDDDRKELWMEDAKASISREKYATARAIYAYALRVFPNSKSLYLAAVDLEREHGNKE 566 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSKI 334 LEK + PH E + L E + L N ++ + + K+ Sbjct: 567 DLWNALEKAVEACPHQE--TFWLMLAREKAGEINEARRVLARAFKQNPDNEDIWLAAVKL 624 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + G IDQA A + AP +++ E+ ++ Sbjct: 625 EADNGFIDQARDLLKTARQNAPTDRVWMRSVAFERQLGNSEAA 667 >gi|78222718|ref|YP_384465.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15] gi|78193973|gb|ABB31740.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15] Length = 729 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 13/239 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A + + +QI A + L + G++ A TKA++++P Sbjct: 42 GDYAKAALEFKNAIQIDPKYAEAYHMLGLVEMKKGNIKGAFGNFTKAVELNPQHQEARLQ 101 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + Y+ A A+ + K + +L A + +KG + Sbjct: 102 LGRIYLGAGAPDEAMKEAVEVLKINPASEDAQ-LLKGAVLIARKEKGKARELLEGLVAKG 160 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENT 307 + A A + AE IL K +NP H +A + ++ Sbjct: 161 VKKPD---AYSLLASIHALDGNAKDAEAILRKGLAINPSSSDLHLTLAGLCVGTGRTDEA 217 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + L+R + LE + + ++ + + G + +A + IAP KE L A Sbjct: 218 ISLLQRVVSLEPGRTDH---RLKLAALCWDTGKVAEARKALTDLVAIAPEKEENRLQAA 273 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 15/262 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 N A + S L L A + + + Sbjct: 458 NAEAALRKVLAKSPNDLEAKAELGDLFLA-----AGDLKRAEAEYGELKRKAPGLPVGYV 512 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + G + A +A+ ++P + + ++ + Y ++ +A L+Q+ K Sbjct: 513 KMGDIYLHRGKSDKALAELEQAVRLNPSSELLAGSLARLYTRLGKFDKAEFLLDQRLKQN 572 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN---K 275 N A N + + ++L L ++ A+ A L Sbjct: 573 P----NDAASYTLLGQMNVARNQYGKARQAYEKALSLNGSNWSAANDLAFLLAETGSGAD 628 Query: 276 KRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A ++EK+ + P P + + + + N ++ ++ +S + Sbjct: 629 LDRALTLIEKVKQSRPDDPRVLDTVGWIYYKKGNAGKAVEILSQVHRKTGDSPVIDYHLG 688 Query: 333 KIALEMGSIDQAHAKAMLAMKI 354 + + G +A AM Sbjct: 689 MASYKAGDKARAKELLTKAMTS 710 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 100/314 (31%), Gaps = 42/314 (13%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 AL +++ + + A K+ + V ++ + + L+ I + + + A + Sbjct: 342 NALAQ--IALDRNRVDEAVKLVTEVLKESPKNTDA--RFLKGNIHMMKGEGAQAVAEYRT 397 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ++ L + N A AL I P+ A+ + +V+ K+ Sbjct: 398 VVTDNPQSVPGFIRLAEAHLLNREKNLAFDNLQNALKIDPENRDALVALARYHVMQKDMK 457 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A L + + +A L GD+ + + E + + + Sbjct: 458 NAEAALRKVLAKSPNDLEAKAEL----GDLFLAAGDLKRAEAEYGELKRKAPGLPVGYVK 513 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + + K KA LE+ ++NP E+ Sbjct: 514 MGDIYLHRGKSDKALAELEQAVRLNPSSELLAG--------------------------- 546 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQS 384 ++++ +G D+A +K P + LL Q+ A + K + Sbjct: 547 ----SLARLYTRLGKFDKAEFLLDQRLKQNPNDAASYTLLGQMNVARNQ-YGKARQAYEK 601 Query: 385 ALHAMPDPLWISDD 398 AL + W + + Sbjct: 602 ALS-LNGSNWSAAN 614 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 7/121 (5%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEIN 321 K L + KA + + +++ P+ A Y + N G + E+N Sbjct: 35 GKELYDKGDYAKAALEFKNAIQID--PKYAEAYHMLGLVEMKKGNIKGAFGNFTKAVELN 92 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + E+ + + +I L G+ D+A +A+ +KI P E LL K Sbjct: 93 PQHQEARLQLGRIYLGAGAPDEAMKEAVEVLKINPASEDAQLLKGAVLIARKEKGKAREL 152 Query: 382 T 382 Sbjct: 153 L 153 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 69/218 (31%), Gaps = 9/218 (4%) Query: 177 ATKAL----DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIA 231 A KAL I+P+ E A L + K + A+ + Sbjct: 251 ARKALTDLVAIAPEKEENRLQAAGFLAGKGEADEAEKLLKEGIAGKGKNYKLRFALADLY 310 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + D+ + + ++ ++ + A+ + +N+ +A ++ ++ K +P Sbjct: 311 LNTGKGDQAVTLLTETAGLDKASRQESLQAKNAL-AQIALDRNRVDEAVKLVTEVLKESP 369 Query: 292 HPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 A H++ + + N +SV + +++ L + A Sbjct: 370 KNTDARFLKGNIHMMKGEGAQAVAEYRTVVTDNPQSVPGFIRLAEAHLLNREKNLAFDNL 429 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 A+KI P L+ + + L Sbjct: 430 QNALKIDPENRDALVALARYHVMQKDMKNAEAALRKVL 467 >gi|288818735|ref|YP_003433083.1| hypothetical protein HTH_1431 [Hydrogenobacter thermophilus TK-6] gi|288788135|dbj|BAI69882.1| hypothetical protein HTH_1431 [Hydrogenobacter thermophilus TK-6] gi|308752322|gb|ADO45805.1| hypothetical protein Hydth_1420 [Hydrogenobacter thermophilus TK-6] Length = 380 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 59/411 (14%), Positives = 127/411 (30%), Gaps = 50/411 (12%) Query: 5 IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRF 64 + + + +++ F V+ + V + + Y FV L FA L F Sbjct: 6 VLFIVIFTVLFLIF--VAQHAYYVKLNFLGITYEVPLFV----LVLVSFAVGFLLPALYF 59 Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124 + + ++ +G L G A + + NE + + Sbjct: 60 LVKD---IRQTAFTKSITRGISYLARGYPQKAEGELSKVSRR-----------NEEIALI 105 Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L IA Y ++ + L R D A+ Y AL Sbjct: 106 LLKAIAERGEIYRGEEVDIKRDAGFVD-AFLGLKLL-----RYRDYEKAKGYLLSALSKD 159 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 +++ L K+ I K ++W + +++ L A + Sbjct: 160 SSNLLALKSLRNISFLEKDLEACIKHQESVLKLCEKWEKETQKRILSDILSYASESLPQQ 219 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 ++L L + + K ++ + ++A+ +EK + + H ++ I + Sbjct: 220 RKDLLEKALDLHRSFYSQA-MWIKYMLEKEDVKEAKKQIEKAFTMGVHNQVLAILSQNEE 278 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 T +K L IN + ++++I +++ Q + Sbjct: 279 HLTRIMDIIKEKEEL--INPD------VLARIYIKLHLFTQLRPLMEKLSQP------IK 324 Query: 363 LLA-QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPIS 412 L+A E + D+ L+ W+ G + +LP+ Sbjct: 325 LMATAFE--SHREMDRSCGEMLQELYKP----WVCSCGESYNNYLPMCEKC 369 >gi|198282345|ref|YP_002218666.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198246866|gb|ACH82459.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 505 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 20/247 (8%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDL-NSAQRY 176 E L+ L I + + + A + P E + + D + A+ Sbjct: 256 EALMNL--GAILSDQGRVDEAIGTFRKALTIKPDYLEALMR--LGVALGRQDRMDEAETV 311 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSL 234 KAL I PD P + W T L Q ++ L ++R Sbjct: 312 LRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIKPDYPEALMNLGAALSRQG 371 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 D+ + I AI+ + A + +L Q + +AE IL + + PE Sbjct: 372 RCLDEAENILRRTLAIQ-----PDHPDALVNLGATLNKQGRWNEAETILRQAVAIK--PE 424 Query: 295 IANIYTHLLSE-NTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAM 349 A+ +L + + G+L A + + ++LV + I + G ++A Sbjct: 425 HADALINLGAVLSKQGRLDEAETILRQALTIMPDQADALVNLGVILRQRGCPEEAKTAFQ 484 Query: 350 LAMKIAP 356 A+ P Sbjct: 485 QALTANP 491 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 16/225 (7%) Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 KAL I P P + AI + ++ A++ + +L Sbjct: 244 FRKALSIKPAYPEALMNLGAILSDQGRVDEAIGTFRKALTIKPDY--LEALMRLGVALGR 301 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE- 294 D+ D + ++L + + A + +L + + + E +L + + P +PE Sbjct: 302 QDRMD--EAETVLRKALAIKPDYPEALMNLGVTLGHEGRWEETETLLRQALTIKPDYPEA 359 Query: 295 ---IANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + + + L+R L I + ++LV + + G ++A Sbjct: 360 LMNLGAALSRQGRCLDEAENILRR--TLA-IQPDHPDALVNLGATLNKQGRWNEAETILR 416 Query: 350 LAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPL 393 A+ I P L+ L + + + AL MPD Sbjct: 417 QAVAIKPEHADALINLGAVLSKQGRLDE-AETILRQALTIMPDQA 460 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 5/125 (4%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A+ + L I PD P + W+ A T L Q E A LI Sbjct: 375 DEAENILRRTLAIQPDHPDALVNLGATLNKQGRWNEAETILRQAVAIKPE----HADALI 430 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + +G + + ++L + + A + L + +A+ ++ N Sbjct: 431 NLGAVLSKQGRLDEAETILRQALTIMPDQADALVNLGVILRQRGCPEEAKTAFQQALTAN 490 Query: 291 P-HPE 294 P HPE Sbjct: 491 PNHPE 495 >gi|114645545|ref|XP_520818.2| PREDICTED: transmembrane and TPR repeat-containing protein 1 isoform 2 [Pan troglodytes] Length = 882 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 723 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781 Query: 389 MPDP 392 DP Sbjct: 782 PKDP 785 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 738 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870 >gi|32477513|ref|NP_870507.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1] gi|32448067|emb|CAD77584.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1] Length = 680 Score = 55.3 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A L L+I +V +L +GDL A T+A +++P Sbjct: 456 GDYLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNG 515 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + ++ + L Q + + + L RS + G + +++ Sbjct: 516 LGATQGMMGDFEASEATLKQAIEIDPNYANSYGNLATLRSAQ----GRNEEAIELFQKAV 571 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGK 310 +L + + L+S + A + + + +P A + + T Sbjct: 572 QLAPERMDHRTNLGRVLMSAQRWEDASKVWQSVLDESPEDVSALLNLGVIAANQQRTEDA 631 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + R+ EI + + + + +G+ +A A ++ P++ Sbjct: 632 IGYFERVLEIVPNHLSATYNLGAMHDALGNTSEAEQYFRRAERLQPQQ 679 >gi|253989561|ref|YP_003040917.1| tetratricopeptide repeat-containing protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781011|emb|CAQ84173.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 389 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 96/290 (33%), Gaps = 57/290 (19%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S TF LL VQ R Y A Sbjct: 83 GEVERAIRIHQSLIESASLTFDQ----RLLAVQ--QLGRDYMSA---------------- 120 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 LY + + AQ K + ++++ Y +W +AI + Sbjct: 121 ---GLYDRA----ENMFAQLVNEKEFRQN-----AFQSLLVIYQSTSDWKKAIDVAEKLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLI 271 K+ K R + A +L+ D+ + + A+++ K C SI + + Sbjct: 169 KSGKHELRQKIAHFYCELALQEMSGDDLDEAIGYLNKAVQADKNCAR---VSIMLGRLFM 225 Query: 272 SQNKKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 ++ + KA L+ + + P + Y HL + R E N + Sbjct: 226 ARQEYIKAADALKSVLEQDKELVSESLPMLQECYQHLNQGDEWENF--LRRCVEENGGAT 283 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQA 370 + ++++ I + + A +K P + L+ A+ E+ Sbjct: 284 -AELMLADIIEQKEGHEVAQIYINHQLKRHPTMRLFCRLMDYHLAEAEEG 332 >gi|40063717|gb|AAR38498.1| TPR repeat protein [uncultured marine bacterium 583] Length = 733 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 69/199 (34%), Gaps = 13/199 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 +G+L+ A + KAL I PD V + + A+ Q ++ Sbjct: 54 KAVGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQ-ELGRLDAAVKSYEQALDIQPDY-- 110 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + + G + A+ ++L + + A +L N+ A Sbjct: 111 --AEAHNNLGITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSY 168 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 EK +NP H + N+ L + +K + IN + E+ + + ++ Sbjct: 169 EKTLAINPDYAEAHNNLGNVLKDLGQLDAA--VKCYEKTLAINPDYAEAHNNLGNVLQDI 226 Query: 339 GSIDQAHAKAMLAMKIAPR 357 +D A A+ I P Sbjct: 227 DQLDAAVKCYEKALAINPD 245 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 76/238 (31%), Gaps = 18/238 (7%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A + A K + E L L +Q + + A + E L I Sbjct: 55 AVGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQEL---GRLDAAVKSYEQALDIQPDYA 111 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A +L +G L++A + KAL I+PD + + A+ + Sbjct: 112 EAHNNLGITLKELGQLDAAVQCYEKALAINPDYAEAHNNLGNALKDLNQLDAAVKSYEKT 171 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ A D G + A+ ++L + + A L + Sbjct: 172 LAINPDY----AEAHNNLGNVLKDLGQLDAAVKCYEKTLAINPDYAEAHNNLGNVLQDID 227 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEINKESVESLVIV 331 + A EK +N P+ A Y++ N + L R L ES + + Sbjct: 228 QLDAAVKCYEKALAIN--PDFAEAYSN--RGNVLKDLNRLDEALVS-----YESAIAI 276 >gi|33864078|ref|NP_895638.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33635662|emb|CAE21986.1| TPR repeat:HAT (Half-A-TPR) repeat [Prochlorococcus marinus str. MIT 9313] Length = 829 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 74/259 (28%), Gaps = 26/259 (10%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSL 160 + Y ++L E + A + F + + Sbjct: 194 AALEQYRFALLLAPESPELHLNFASALKKEGKVEEAIASCRNAIELRPDFEAAYFGL-GI 252 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 G+ A+ KA+D+ PD + E+ A + Sbjct: 253 VL--KENGEFEEAKASYRKAIDLKPDFADAYLNLGNILKENGEFEEAKASYRTAIDLKPD 310 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + A L + L+ ++GD+ + ++++L + A + L + +A Sbjct: 311 F--ADAYLNLGNILK--EEGDVEEAIASYRKAIELKPDFADAYLNLGNILKDKGDVGQAI 366 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K + P+ + Y L L + +S +I K L++ Sbjct: 367 ASYRKAIDLK--PDFSEAYYQL-------------FLVNSHSGDHDSALIALKQCLDVDD 411 Query: 341 -IDQAHAKAMLAMKIAPRK 358 A A A R+ Sbjct: 412 NHYNARQSIGHAFFQADRR 430 >gi|312111146|ref|YP_003989462.1| hypothetical protein GY4MC1_2109 [Geobacillus sp. Y4.1MC1] gi|311216247|gb|ADP74851.1| Tetratricopeptide repeat protein [Geobacillus sp. Y4.1MC1] Length = 1396 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 97/262 (37%), Gaps = 22/262 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ S A A K L L ++ A +++ A E L+I Sbjct: 888 GMFSKAIGVYEQASKAQKSTF--------PLYRL--AEMYRAFERWDEAKRYYEACLEID 937 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A L + +++ + + KAL+ P V A L + S + Sbjct: 938 DAFAVAHLRLAVLNEMEENIDKQRFHLQKALEHDPLHIHVAYAA----ALFDDPSLLLQT 993 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + ++ A + ++ I ++ GD+ ++L+L + AAK L Sbjct: 994 MEAARERAGDVWYYDSLGYIYGAM-----GDISKEKEAVEQALRLHPDHPDVLHHAAKVL 1048 Query: 271 ISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + + K R+A ILE++ + + + ++ Y S G K RL + ++ + + Sbjct: 1049 VKEGKSREAAAILERLIEQDVRNEDLYETYVQAFSYTMRGIGKLRERLRKWKLDNQKKSI 1108 Query: 330 IV--SKIALEMGSIDQAHAKAM 349 + + AL +D A +A Sbjct: 1109 VYMHAASALSSSMLDIARGEAD 1130 >gi|126339121|ref|XP_001372916.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 1000 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 84/263 (31%), Gaps = 41/263 (15%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D A+ Y +AL ++P + + AI FL K E+ + Sbjct: 641 TKDTTEAKEYYQRALQLNPQHNRALFNLGNLLKSQGKKEEAIIFLRDSIKFGPEFADAYS 700 Query: 227 ILLIARSLE------------------------------NADKGDMIASYHDAIESLKLC 256 L + + D G ++ + ++++L Sbjct: 701 SLASLLAEQELFEEAEEVYQSGIKNCPESPDLHNNYGVFLVDAGAPESAMYHYQQAIRLS 760 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKL 311 + +A + + S + ++AE ++ + EI A Y E + Sbjct: 761 PSHHVAMVNLGRLYRSLGENKEAEKWYKRALDITQTAEILSPLGALYYNTGRYEEALQIY 820 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML-AMKIAPRKEIFLLLAQIEQA 370 + A L + E + ++++ MG ++A + A E + LL+ I Sbjct: 821 REAATL---QPSAKEIQLALAQVLAMMGQTEEAETMTNHIVSEEAGCLECYRLLSAIYSK 877 Query: 371 NSHNTDKILYWTQSALH-AMPDP 392 H K L + AL DP Sbjct: 878 QEH-YSKALEAIEKALQLKPKDP 899 >gi|254482621|ref|ZP_05095859.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] gi|214036980|gb|EEB77649.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 749 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 109/338 (32%), Gaps = 56/338 (16%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 D G L ++ + AR + S + + + + ++ A Sbjct: 426 RDTGNH-LARSFAAVDQGD---ARAVPSLAALANDTNAPPIWRATAMEALGQAGGRE-AT 480 Query: 141 EKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + +L R V SL F + ++P + V+ Sbjct: 481 QTMAALLYDDDSIIRASTVRSLQF-----------LSLPQRFQLLTPLL---NDPVLAVR 526 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAIL----------------LIARSLENADKGDM 242 + + A+ + + A+E NR R + L +L +++GD Sbjct: 527 MEVAQ---ALAGVPLDQIKAQEANRLRTLFKEYVTVYEQHSDMPGVLSQLALFYSNRGDA 583 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEIA 296 ++ E++++ + A + A L +QN++ +A L + V P H A Sbjct: 584 PSAERAYKEAIEINPQLVAAYLNLADLLRAQNREEEARKFLLEALAVAPDNGNTIH---A 640 Query: 297 NIYTHLLSEN---TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 S + + L +A LE + + + ++G+ QA + + Sbjct: 641 LGLLETRSGDSEKALDYLAQAAALETLGTRH---RFVYAIALHDLGNPRQAVTELNKLNR 697 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMP 390 P E LL A + K + Q + A Sbjct: 698 KFPSDEQILLALANYSAELGDYAKARAYAQQLVQLAPR 735 >gi|300718965|ref|YP_003743768.1| cellulose synthase operon C domain protein [Erwinia billingiae Eb661] gi|299064801|emb|CAX61921.1| Cellulose synthase operon C domain protein [Erwinia billingiae Eb661] Length = 1102 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 90/280 (32%), Gaps = 41/280 (14%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 LA A + + + +A+ L + + +A+ ++AL + Sbjct: 365 LAAGNLPQAASQYQRARSLDNRDSYALIGLGDVALAQKNPATAEVQYSRALRLDAGNTTA 424 Query: 191 TEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + Y +A+ F+N QKK R+ L A + A G++ + Sbjct: 425 ARRLAALYQQQSP-QKAMAFINGLPASQKKALGDTLASLRSSALSAEADRLAAGGNVRQA 483 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL- 303 ++L+L + + + A +L + + A+ ++ + + P P A +Y + L Sbjct: 484 ADVYRQALQLSPDDVWLNTRLAGALRQSGQTQAADRQMQAMARQQPGVP--AQVYANALY 541 Query: 304 ---SENTVGKLKRALRLEEINKES--------VESLVIVSKIA---------LEMGSIDQ 343 S+ L + L + + +E+ +++++ + + Sbjct: 542 LSGSDRPQAALAQIHTLPQAKWDHNITDLNTRLETGLLIARAEASLDNIEALIARHQLAA 601 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 A + A ++ W Sbjct: 602 ARKQLNALPPEASTANVY-----------SGRRVANAWLA 630 >gi|270004555|gb|EFA01003.1| hypothetical protein TcasGA2_TC003916 [Tribolium castaneum] Length = 1054 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 126 EALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYITALQYNPDLYCVRSDLG 183 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L G++ A + K Sbjct: 184 NLLKA-----LGRLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 235 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 236 AVGLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 291 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + +++L N A A +L + + +AE ++ P H + N Sbjct: 292 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLCPSHADSLNN 351 Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E +L LE E + ++ + + G +++A A++I Sbjct: 352 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 409 Query: 355 APR 357 P Sbjct: 410 QPT 412 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 326 GQVAEAEECYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 382 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ S A+ + + Sbjct: 383 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVSGALQCYTRAIQ 442 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 443 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 492 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 261 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 320 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + + A N + + A L + ++G + + +++L++ Sbjct: 321 ALKEKGQVAEAEECYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 376 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDVSGAL 434 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 435 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 480 >gi|239994660|ref|ZP_04715184.1| TPR repeat protein [Alteromonas macleodii ATCC 27126] Length = 668 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 27/274 (9%) Query: 107 HSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYS 159 + E L+ Q+ +A +Q A + +++ P + Sbjct: 330 TAAKDFNAYLQQEPDDLQAVLMLSQVYMATQQDKQALALLERHQDALMEDPDSALL---- 385 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L R A+R P+ + ++ + A++ L K Sbjct: 386 LGDLFIRQNKAFKAERLLQNLEYKYPNENKLQLFKIKLMAARGKQDEALSILENNLSTYK 445 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A L SL N + A L N A LI Q + +A Sbjct: 446 D----NAGFLFTYSLMNLQAQQFKNALKGADLLSALFPNEAEVFNLKAGILIRQGRLEEA 501 Query: 280 EVILEKIWKVNPH--PE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 ++ +EK NP P +A + L + + L L ++ + E+L++ + Sbjct: 502 KINIEKALAQNPTLFPAKFNLAATESRLGNVDKSNLL--VEELLALSPQHNETLMLKAFN 559 Query: 335 ALEMGSIDQAHAKAMLAMKIAP-----RKEIFLL 363 + G++++A + + + P R+ + L Sbjct: 560 LSKAGNLEEAKQIYLDILTLTPSNTGARERVSSL 593 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 106/285 (37%), Gaps = 35/285 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL SIA N L++ + + L+ Q+A + + A L+ L Sbjct: 173 GLASIALQNEDLSKATSLINKAMSLEPKNAITWRLKGQLAYRQGDTDAATAHLQKALTFN 232 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ +L D ++A+ + + + +P+ P ++ ++ +++ +AI Sbjct: 233 RDDPIALRNLVDLYLEAKDYDTAKLFVDEIIQDTPNDPLA--ILLNSWLQSRDNQQAID- 289 Query: 211 LNQKKKNAKEWNRN--------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 N+K K ++ + +LL L N +M + D L+ + + A Sbjct: 290 -NEKLKELNDFMAQLDPELITSQPMLLYISGLTNFFNNNMETAAKDFNAYLQQEPDDLQA 348 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-------PE----IANIYTHLLSENTVGKL 311 + ++ ++ + ++A +LE+ H P+ + +++ +L Sbjct: 349 VLMLSQVYMATQQDKQALALLER------HQDALMEDPDSALLLGDLFIRQNKAFKAERL 402 Query: 312 KRALRLEEINKESVESLVIVSKIALEM--GSIDQAHAKAMLAMKI 354 LE E+ + + KI L G D+A + + Sbjct: 403 --LQNLEYKYPN--ENKLQLFKIKLMAARGKQDEALSILENNLST 443 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 9/142 (6%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ R+ D + D + N + A A + KA ++ K Sbjct: 137 LMIRATACIRLQDESCALRDYNTIVSRTPNFVPAINGLASIALQNEDLSKATSLINKAMS 196 Query: 289 VNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + P I Y ++ L++AL N++ +L + + LE D Sbjct: 197 LEPKNAITWRLKGQLAYRQGDTDAATAHLQKALT---FNRDDPIALRNLVDLYLEAKDYD 253 Query: 343 QAHAKAMLAMKIAPRKEIFLLL 364 A ++ P + +LL Sbjct: 254 TAKLFVDEIIQDTPNDPLAILL 275 >gi|325111180|ref|YP_004272248.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324971448|gb|ADY62226.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 368 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 91/244 (37%), Gaps = 15/244 (6%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL-NSAQRYATKALDI 183 L +IA A+ + A + + P V++ + + + A R ++A+ + Sbjct: 109 LRGRIADAQGKLQQAINFYQQGTKQPDV-AAGVWNSLGLALQRDEQLQPALRAFSEAIRL 167 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 SPD+P E L + +++ N+ +RA R + G+ Sbjct: 168 SPDSPMGYENRAGLLALMGDHKASLSDSNRALAIDP----HRAGAYSNRGVTWEALGEPK 223 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHL 302 + D +L+ A A +++ R A E++ K P P++AN Y L Sbjct: 224 KALADFTRALEEDPAHFDARANRALLNVAEKNWRAAATDYEQLRKYAPSSPDLANDYAWL 283 Query: 303 L---SENTVGKLKRALRLEEIN---KESVESLV--IVSKIALEMGSIDQAHAKAMLAMKI 354 L TV ++A+ L E+ + S ++ E G ++A +K Sbjct: 284 LATCPHETVRNGRKAVELAELAVRLTDHRVSDYEDTLAAAFAEAGDFEKAIEIQQRLVKS 343 Query: 355 APRK 358 P + Sbjct: 344 KPDE 347 >gi|32474853|ref|NP_867847.1| hypothetical protein RB7495 [Rhodopirellula baltica SH 1] gi|32445393|emb|CAD75394.1| conserved hypothetical protein-containing TPR-domains [Rhodopirellula baltica SH 1] Length = 3273 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 32/265 (12%) Query: 145 MMLQIPATREFAVYSLY--FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + ++ +T E +L ++ + + + KAL S A ++ +A+ Sbjct: 500 RLAEVFSTFELGERALAAWRDASEMDLTFAQELRFAKALRDSKQHEEAF-ARLE---VAR 555 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAIL----------------LIARSLENADKGDMIASY 246 + + Q K+ E R L L +L + G + + Sbjct: 556 DIAETPDEQEQVLKDQIETYRQAGTLGEQIATLKTQPPTVDRLRQLALMHQAAGQLPDAA 615 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYT 300 ++ K +++ + AA Q + A + EK+ ++ N +A + T Sbjct: 616 EAIRQARKSEPDNVDVLVVAADIAERQTRLSDAVTLFEKLSQVDTRFRTNYLQRVAGLQT 675 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L + L L + N S ES + ++ AL D+A AM +APR Sbjct: 676 RLGQIDEA--LATCESLIDANPASPESYLFYARTALSANRDDEAFTALRRAMNVAPRDNG 733 Query: 361 FLLLAQIEQANSH--NTDKILYWTQ 383 + E A S+ + LYW Sbjct: 734 PRRMMASELAESYRTDEAIELYWQA 758 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 88/272 (32%), Gaps = 43/272 (15%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 LM AA +P A + + + + V ++ IA + + + A E + Q+ Sbjct: 602 ALMHQAAGQLPDAAEAIRQARK--SEPDNVDVLVVAADIAERQTRLSDAVTLFEKLSQVD 659 Query: 151 ATREFAVYSLYFESC-----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 TR + Y + R+G ++ A +D +P +P + + A Sbjct: 660 -TRF---RTNYLQRVAGLQTRLGQIDEALATCESLIDANPASPESYLFYARTALSANRDD 715 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A T L + A N R + + E A+ + +++ Sbjct: 716 EAFTALRRAMNVAPRDNGPRRM----MASELAESYRTDEAIELYWQAI------------ 759 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 SQ R I++ ++A +Y + + R L + ++ Sbjct: 760 ---QYESQTDDR--ISIIK---------QLAPLYD--RQGDIEELISRIESLGREDGDAR 803 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E+L + S + A + PR Sbjct: 804 ETLRLTSAAYEAIEDYGAARQSIDQLIAQQPR 835 >gi|187927360|ref|YP_001897847.1| tetratricopeptide repeat-containing protein [Ralstonia pickettii 12J] gi|309779939|ref|ZP_07674693.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA] gi|187724250|gb|ACD25415.1| Tetratricopeptide TPR_2 repeat protein [Ralstonia pickettii 12J] gi|308921298|gb|EFP66941.1| tetratricopeptide repeat protein [Ralstonia sp. 5_7_47FAA] Length = 645 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 22/208 (10%) Query: 191 TEAVVQQY---VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +A++Q + + + A+ L + + + R L +AR+ D + Sbjct: 196 ADALLQLQQQMSKSSDPAGAVGALQR--IASHDMQRPETHLALARAK--VAAKDTAGALT 251 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302 + +LKL A+I AA+ L + + A L K P H +A +Y + Sbjct: 252 ELDTALKLRPGYEDAAILAAE-LRADSDPDAAITGLRSFLKAAPASIDGHLALARMYL-V 309 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKE 359 ++ + + L++I + + + L+ D A A +P Sbjct: 310 RNQQDKARAE-FETLKKIAPNDARITLALGLLNLQQRQYDDAERYLKEYVTATAKSPTLS 368 Query: 360 ---IFLLLAQIEQANSHNTDKILYWTQS 384 + LAQ+ + + L W Sbjct: 369 PEPGYQGLAQLAE-EKRDYAGALGWVDK 395 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 7/203 (3%) Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++SP + + V +WS L + R A+L + + + + Sbjct: 154 ELSPTSMPARQVQQLLLVATGQWSEVEPMLQAQLNKVSPGQRADALLQLQQQMSKSSDPA 213 Query: 242 MIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 I S + + A A++ ++ A L+ K+ P + + A + Sbjct: 214 GAVGALQRIASHDMQ---RPETHLALARAKVAAKDTAGALTELDTALKLRPGYEDAAILA 270 Query: 300 THLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357 L +++ + + S++ + ++++ L D+A A+ KIAP Sbjct: 271 AELRADSDPDAAITGLRSFLKAAPASIDGHLALARMYLVRNQQDKARAEFETLKKIAPND 330 Query: 358 KEIFLLLAQIEQANSHNTDKILY 380 I L L + D Y Sbjct: 331 ARITLALGLLNLQQRQYDDAERY 353 >gi|327542179|gb|EGF28672.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica WH47] Length = 680 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A L L+I +V +L +GDL A T+A +++P Sbjct: 456 GDYLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNG 515 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + ++ + L Q + + + L RS + G + +++ Sbjct: 516 LGATQGMMGDFEASEATLKQAIEIDPNYANSYGNLATLRSAQ----GRNKEAIELFQKAV 571 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGK 310 +L + + L+S + A + + + +P A + + T Sbjct: 572 QLAPERMDHRTNLGRVLMSAERWEDAIKVWQSVLDDSPEDVSALLNLGVIAANQQRTEDA 631 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + R+ EI + + + + +G+ +A A ++ P++ Sbjct: 632 IGYFERVLEIVPNHLSATYNLGAMHDALGNTSEAEQYFRRAERLQPQQ 679 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 5/169 (2%) Query: 124 LLEVQIALAERQ-YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL +A ++ Y+ L+ A +L R GD A+ + ++L+ Sbjct: 411 LLLATVAFSQATIYSGLEVLWRDTLEKNPNSFMAHNNLGALLNRRGDYLEAETHLRRSLE 470 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 I P+ + Q + A++ + E N A GD Sbjct: 471 IKPNFADSVINLAQARQNLGDLEEALSLYTRA----TELNPGLAEAYNGLGATQGMMGDF 526 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 AS +++++ N + A +Q + ++A + +K ++ P Sbjct: 527 EASEATLKQAIEIDPNYANSYGNLATLRSAQGRNKEAIELFQKAVQLAP 575 >gi|115352517|ref|YP_774356.1| HemY domain-containing protein [Burkholderia ambifaria AMMD] gi|115282505|gb|ABI88022.1| HemY domain protein [Burkholderia ambifaria AMMD] Length = 395 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 115/409 (28%), Gaps = 45/409 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + ++ + + V V + + S + + + L Sbjct: 3 LRGIVWLAILFGIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIGIVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAARDALAVDAN---- 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 Q A + AH E + + + A+ A Sbjct: 119 -------QGAASLVAATAAHRMHEYTRRDD----------WLSKVDAPEWQDARLLAAAD 161 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + A + + A + ++ K W + E Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221 Query: 241 DMIASYHDAIESL----KLCDN--------SIM-------ASICAAKSLISQNKKRKAEV 281 + A E+L + + + AA+ L+ ++ +A Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPLERQSPRLADLAAELLVPLERRPEARR 281 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 I+E+ N + Y + + +++A ++ + + + L + ++ + Sbjct: 282 IVEEALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLW 341 Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K A + LA++ + ++ +SAL Sbjct: 342 GKAQSFLEAALKQADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|197285173|ref|YP_002151045.1| tetratricopeptide repeat protein [Proteus mirabilis HI4320] gi|227355604|ref|ZP_03839998.1| lipopolysaccharide N-acetylglucosaminyltransferase [Proteus mirabilis ATCC 29906] gi|194682660|emb|CAR42785.1| conserved hypothetical protein [Proteus mirabilis HI4320] gi|227164211|gb|EEI49104.1| lipopolysaccharide N-acetylglucosaminyltransferase [Proteus mirabilis ATCC 29906] Length = 389 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 104/314 (33%), Gaps = 47/314 (14%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + A + +++ R A+ L + G + A+ + S Sbjct: 83 GEVERAIRIHQSLMESAALSFEQRLLAIQQLGRDYVAAGVYDRAEHMFLQLIDEQDFRQS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMI 243 ++++ Y L +W +AI + K + E A +L+ ++ Sbjct: 143 -----ALQSLLAIYQLTSDWGKAIETAEKLVKLGQHELKEQIAHFYCELALQEMSSDNLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297 + ++ ++ SI + I++++K KA ++E K P + Sbjct: 198 NALSFLQKAGQMDPLCARVSIMYGRIYIARDEKNKAIDVLMKVIEQDKEMVSETLPMLFE 257 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIAL-----EMGSIDQAHAKAMLA 351 + S+ + + LR + VES ++++ L E I+ A Sbjct: 258 CF---QSQGDPARWEAYLR------QCVESNCGAIAELYLADIIEEKEGIEAAQLYINRQ 308 Query: 352 MKIAPRKEI-FLLL----AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV-- 404 ++ P + + L+ A+ E+ + + +L + P + +S Sbjct: 309 LERHPTMRLFYRLMRYHLAEAEEGRAKESLILLRYMV-GEQIRTKPDYRCHKCGFTSHAL 367 Query: 405 -WLPLSPISKTLCY 417 W P ++ Sbjct: 368 YWH--CPSCRSWDT 379 >gi|212711756|ref|ZP_03319884.1| hypothetical protein PROVALCAL_02831 [Providencia alcalifaciens DSM 30120] gi|212685278|gb|EEB44806.1| hypothetical protein PROVALCAL_02831 [Providencia alcalifaciens DSM 30120] Length = 390 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 98/307 (31%), Gaps = 31/307 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +++ R A L + G + A+ + D Sbjct: 84 GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMTAGVYDRAENMFQQLTDEVDFKQS 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 ++++ Y L +W +AI + K E R + A + + D+ + Sbjct: 144 ALQSLLSIYQLTSDWGKAIETATKLVKLGSEELREQIAHFYCELATQELASDDIDEALSL 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH----------PEIANI 298 + + N SI + I Q KA L +++ H P + Sbjct: 204 LNKGEQADKNCARVSIMKGRIFIEQGNYEKAIAALVQVY----HQDRELVSETLPLLYEC 259 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y H + + + N ++ + + ++ I +E + + A + ++ P Sbjct: 260 YRHTGLADGWE--AYLRQCVDGNTGAI-AELYLADIIVEKQNHEAAASYINDQIQRHPTM 316 Query: 359 EI-FLLL-AQIEQANSHNTDKILYWTQSAL-HAMP-DPLWISD-DGYLSSV--WLPLSPI 411 + + L+ + +A + L + + + P + G+ S W P Sbjct: 317 RLFYRLMDYHLAEAEEGRAKESLILLRKMVGEQIRTKPDYRCHKCGFTSRSLYWH--CPS 374 Query: 412 SKTLCYF 418 ++ Sbjct: 375 CRSWDTI 381 >gi|116747525|ref|YP_844212.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116696589|gb|ABK15777.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] Length = 567 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 51/293 (17%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLY 161 A + S F L Q ++ ++ + A E E + + P + + L Sbjct: 34 AARSESGSRADLYFEY------LLAQYYVSVKEIDKAIEAYHEALKKDPRSPML-LTELA 86 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 R G + A + A + Q Y + +RAI ++ + Sbjct: 87 ALLIRQGKIEQALKLTEDATSFDRTYEPAYMLLGQLYAGIGQNARAIDAYSRAIEINP-- 144 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A LL+ K D D +++ L ++ +A A+ + ++AE Sbjct: 145 SNEDAHLLLGALYAQEKKYDEAMEAFDHLKA--LLPDNPVALYYKARVFLDMKLYKQAEK 202 Query: 282 I------LEKIWKVNPHPEIANIY--------------------------------THLL 303 I +E ++ ++A +Y ++ Sbjct: 203 IYLDVLAIEPAFENASL-DLAYVYEVTERLKDAEQTYLQILSANPANVNARTRLGNLYMR 261 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L+ L ++N++ VES + V I L+ ++A +K P Sbjct: 262 QDRPAEALRHFSHLLKLNRKDVESRLKVGIIHLQQKDYEEAIKDFTYLLKDEP 314 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 18/182 (9%) Query: 127 VQIALAERQYNIAHEKLEMMLQ------IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + + A + +L TR +Y R A R+ + Sbjct: 222 AYVYEVTERLKDAEQTYLQILSANPANVNARTRLGNLY------MRQDRPAEALRHFSHL 275 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L ++ V ++ K++ AI K+ ++++ L + A+K Sbjct: 276 LKLNRKDVESRLKVGIIHLQQKDYEEAIKDFTYLLKDEPQYDQ----ALYYLASTYAEKQ 331 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 D + + + MA A Q + +L++ PE+A++Y Sbjct: 332 DFEQAIRNFRLIARSSPLWPMAQTRLALIFSKQKDFQNGAAVLKEAIDAQ--PEVADLYL 389 Query: 301 HL 302 +L Sbjct: 390 YL 391 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 18/174 (10%) Query: 144 EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 +++ P T + + D A + L+I P + Y Sbjct: 410 RGLVKTPRDTDLLFRKGVILDKMSRRDDAIAVM--KRILEIEPQNANALNYIGYTYAEMG 467 Query: 203 -EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A + A + ++ + + G + +E+LK + Sbjct: 468 INLNEARQMIKAALATAPD----DGYIMDSLAWVYYKLGQHKKALETILEALKRVPQDPV 523 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 +S KK +A EK A Y+H E KL R Sbjct: 524 IHEHLGDIYLSLGKKNEAIEAYEK----------ALEYSHTEPEKIREKLDRLK 567 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 15/162 (9%) Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 ++ +R + ++ + E+LK S M A LI Q K Sbjct: 35 ARSESGSRADLYFEYLLAQYYVSVKEIDKAIEAYHEALKKDPRSPMLLTELAALLIRQGK 94 Query: 276 KRKAEVILEKI--WKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +A + E + P + +Y + + R EIN + ++ ++ Sbjct: 95 IEQALKLTEDATSFDRTYEPAYMLLGQLYAGI--GQNARAIDAYSRAIEINPSNEDAHLL 152 Query: 331 VSKIALEMGSIDQAHA---KAMLAMKIAP-----RKEIFLLL 364 + + + D+A + P + +FL + Sbjct: 153 LGALYAQEKKYDEAMEAFDHLKALLPDNPVALYYKARVFLDM 194 >gi|219847306|ref|YP_002461739.1| tetratricopeptide repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219541565|gb|ACL23303.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM 9485] Length = 1424 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 52/363 (14%), Positives = 101/363 (27%), Gaps = 73/363 (20%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ---QHTFHNEY--------LVYLLEVQIALAERQYNIA 139 L+ + + AR ++ + + L LLE Q A Sbjct: 953 ALLLASQGDYAAARPLYERALAISERALGPDHPDTATSLNNLALLLESQ-----GDDAAA 1007 Query: 140 HEKLEMMLQIPATREFA---------VYSLYFESCRIGDLNSAQRYATKALD-----ISP 185 E L I R +++L GD +A+ +AL + P Sbjct: 1008 RPLYERALAIRE-RALGPDHPDTATSLHNLARLLYHQGDYAAARPLYERALAIYERALGP 1066 Query: 186 DAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENAD 238 D P ++ +++ A + + + + A L + A Sbjct: 1067 DHPQTATSLNNLAGLLASQGDYAAARPLVERALAIRERALGPDHPQTATSLTNLAGLLAS 1126 Query: 239 KGDMIASYHDAIESLK-----LCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKVN 290 +GD A+ +L L + + A+ L Q A + E+ + Sbjct: 1127 QGDYAAARPLYERALAIYERALGPDHPQTATSLHNLARLLYHQGDYAAARPLYERALAIR 1186 Query: 291 P------HPEIANIYTHL------LSENTVGKLKRALRLE----EINKESVE---SLVIV 331 HP+ A +L ++ + L + + + SL + Sbjct: 1187 ERALGPDHPDTAASLHNLAGLLYHQGDDAAARPLYERALAIYERALGPDHPDTATSLHNL 1246 Query: 332 SKIALEMGSIDQAHAKAMLAMKI--------APRKEIFLLLAQIEQANSHNTDKILYWTQ 383 + + G A A+ I P L + A+ + + Sbjct: 1247 AGLLYHQGDYAAARPLYERALAIYERALGPDHPDTATSLNNLALLLASQGDDAAARPLYE 1306 Query: 384 SAL 386 AL Sbjct: 1307 RAL 1309 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 77/294 (26%), Gaps = 51/294 (17%) Query: 115 TFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYS---------LYFE 163 LL V L + Y A E L I R L Sbjct: 771 ALDERSAAQLLMVTAGLLYHQGDYAAARPLYERALAISE-RALGPDHPQTATSLNNLALL 829 Query: 164 SCRIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKK 215 GD +A+ +AL I PD P ++ +++ A + Sbjct: 830 LASQGDYAAARPLYERALAIRERALGPDHPDTAASLHNLALLLASQGDYAAARPLYERAL 889 Query: 216 K---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + + + + + + AI L + + Sbjct: 890 AIRERALGPDHPDTATSLDNLAYLLQQQGDYAAARPLYERALAIRERALGPDHPQTATSL 949 Query: 267 ---AKSLISQNKKRKAEVILEKIWKVNP------HPEIA------NIYTHLLSENTVGK- 310 A L SQ A + E+ ++ HP+ A + ++ + Sbjct: 950 HNLALLLASQGDYAAARPLYERALAISERALGPDHPDTATSLNNLALLLESQGDDAAARP 1009 Query: 311 ------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 R L + ++ SL ++++ G A A+ I R Sbjct: 1010 LYERALAIRERALGPDHPDTATSLHNLARLLYHQGDYAAARPLYERALAIYERA 1063 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 89/322 (27%), Gaps = 55/322 (17%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHT----FHNEYLVYLLEVQIALAE--RQYNIAHEKLE 144 L+ + + AR ++ + L+ L + Y A E Sbjct: 869 ALLLASQGDYAAARPLYERALAIRERALGPDHPDTATSLDNLAYLLQQQGDYAAARPLYE 928 Query: 145 MMLQIPATREFA---------VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWV 190 L I R +++L GD +A+ +AL IS PD P Sbjct: 929 RALAIRE-RALGPDHPQTATSLHNLALLLASQGDYAAARPLYERALAISERALGPDHPDT 987 Query: 191 TEAVVQQYVL---AKEWSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENAD 238 ++ +L + + A + + + + + Sbjct: 988 ATSLNNLALLLESQGDDAAARPLYERALAIRERALGPDHPDTATSLHNLARLLYHQGDYA 1047 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKVNP---- 291 + AI L + + A L SQ A ++E+ + Sbjct: 1048 AARPLYERALAIYERALGPDHPQTATSLNNLAGLLASQGDYAAARPLVERALAIRERALG 1107 Query: 292 --HPEIANIYTHL------LSENTVGKLKRALRLE----EINKESVE---SLVIVSKIAL 336 HP+ A T+L + + L + + + SL ++++ Sbjct: 1108 PDHPQTATSLTNLAGLLASQGDYAAARPLYERALAIYERALGPDHPQTATSLHNLARLLY 1167 Query: 337 EMGSIDQAHAKAMLAMKIAPRK 358 G A A+ I R Sbjct: 1168 HQGDYAAARPLYERALAIRERA 1189 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 88/318 (27%), Gaps = 56/318 (17%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHT----FHNEYLVYLLEVQIALAE--RQYNIAHEKLE 144 GL++ + + AR + + L L Y A E Sbjct: 1080 GLLA-SQGDYAAARPLVERALAIRERALGPDHPQTATSLTNLAGLLASQGDYAAARPLYE 1138 Query: 145 MMLQIPATREFA---------VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWV 190 L I R +++L GD +A+ +AL I PD P Sbjct: 1139 RALAIYE-RALGPDHPQTATSLHNLARLLYHQGDYAAARPLYERALAIRERALGPDHPDT 1197 Query: 191 TEAVVQQYVL---AKEWSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENAD 238 ++ L + + A + + + + + Sbjct: 1198 AASLHNLAGLLYHQGDDAAARPLYERALAIYERALGPDHPDTATSLHNLAGLLYHQGDYA 1257 Query: 239 KGDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 + AI L + + A L SQ A + E+ + Sbjct: 1258 AARPLYERALAIYERALGPDHPDTATSLNNLALLLASQGDDAAARPLYERALAIRERALG 1317 Query: 292 --HPEIANIYTHL------LSENTVGK--LKRALRLE--EINKESVESLVIV---SKIAL 336 HP+ A T+L ++ + +RAL + + + ++ + + + Sbjct: 1318 PDHPDTAASLTNLALLLASQGDDAAARPLFERALAIYERALGPDHPDTAASLNNLAGLLA 1377 Query: 337 EMGSIDQAHAKAMLAMKI 354 G A A++I Sbjct: 1378 SQGDYAAARPLFERALRI 1395 >gi|15602663|ref|NP_245735.1| hypothetical protein PM0798 [Pasteurella multocida subsp. multocida str. Pm70] gi|12721102|gb|AAK02882.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 395 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 62/193 (32%), Gaps = 41/193 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151 + A ++H + + + LL Q + Y+ A +++ P Sbjct: 91 GEVDRALRIHQALD--RSPDYTFEQKLLAKQ--QLAKDFMAVGFYDRAEMLYILLVDEPE 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 E A+ L + + A A K ISP + Q Y Sbjct: 147 FAENALQQLAVLYQKTKEWEKAINVAEKLAKISPQ--ENNIELAQYYCE----------- 193 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +A+SL +K + +LK+ N + ASI + LI Sbjct: 194 ------------------LAQSLSLEEKTQQERQKGLLVSALKVAPNCVRASILLGQLLI 235 Query: 272 SQNKKRKAEVILE 284 + + ++A + LE Sbjct: 236 QEKRYQQAVMTLE 248 >gi|87303254|ref|ZP_01086047.1| hypothetical protein WH5701_12388 [Synechococcus sp. WH 5701] gi|87282149|gb|EAQ74110.1| hypothetical protein WH5701_12388 [Synechococcus sp. WH 5701] Length = 783 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 74/225 (32%), Gaps = 10/225 (4%) Query: 132 AERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + A + ++ + ++ + E+ GD+ +A +AL+ SP Sbjct: 27 LAPDHLGARSAIALLERRRVSKPIDLSSLIQIAEEAYSQGDIRTALASFERALEQSPGQR 86 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + A + + ++ +A L + + L+ + + A+ Sbjct: 87 DLRAATARCHRELRQHKKAEAILAALLEEEPTHFSS----LLGMAELEDHRQQPAAAIRW 142 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSE 305 +L + A L+ + A+ +LE + +PH P + A H S Sbjct: 143 YRLALDQRPDHQALRATLALCLLRSGEWAAAQELLEHALRDSPHEPTLLVARRDLHAASG 202 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 L + +L ++ + + + ++ ++A Sbjct: 203 ELEQALALSQQLLAVDPATPWHHLSHVHLLRQLQRFEEALIALEA 247 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 7/155 (4%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQ---YNIAHEKLEMMLQIPATREFAVYSLYF 162 + S + L A R+ + A L +L+ T ++ + Sbjct: 69 RTALASFERALEQSPGQRDLRAATARCHRELRQHKKAEAILAALLEEEPTHFSSLLGMAE 128 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 +A R+ ALD PD + + + + EW+ A L +++ Sbjct: 129 LEDHRQQPAAAIRWYRLALDQRPDHQALRATLALCLLRSGEWAAAQELLEHALRDSP--- 185 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + LL+AR +A G++ + + + L + Sbjct: 186 -HEPTLLVARRDLHAASGELEQALALSQQLLAVDP 219 >gi|321469627|gb|EFX80606.1| hypothetical protein DAPPUDRAFT_303888 [Daphnia pulex] Length = 926 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%) Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G ++ + +L+ P + W+ A ++ L + A Sbjct: 537 SQGAFECSRAVYSHSLETFPAKKSIWLRAAHFERQ------HGTRDSLESLLQRAVAHCP 590 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L + + GD+ A+ + + NS + A K + +A +L Sbjct: 591 QAEVLWLMGAKSKWLAGDVPAARSILSLAFQANPNSEEIWLAAVKLESENWEYERARKLL 650 Query: 284 EKIWKVNPHPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 K P P + L + LK+ E + + ++ +I + + Sbjct: 651 AKARNSAPTPRVLMKSAKLEWHLGDLAEALKQLQTAIEQFPDYPKFYMMQGQIHVLQQRM 710 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSA 385 QA L + P ++LLLA+++++ N + + A Sbjct: 711 TQARESYNLGTRKCPTSVPLWLLLARLDESQ-GNMTRARSVLEKA 754 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 91/257 (35%), Gaps = 36/257 (14%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--- 223 GD+ +A+ + A +P++ + A V+ E+ RA L + + +A Sbjct: 606 AGDVPAARSILSLAFQANPNSEEIWLAAVKLESENWEYERARKLLAKARNSAPTPRVLMK 665 Query: 224 -----------NRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257 A+ + ++E + + M + + C Sbjct: 666 SAKLEWHLGDLAEALKQLQTAIEQFPDYPKFYMMQGQIHVLQQRMTQARESYNLGTRKCP 725 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR- 316 S+ + A+ SQ +A +LEK + N P+ + ++ + LK Sbjct: 726 TSVPLWLLLARLDESQGNMTRARSVLEKARQKN--PQNSQLWLEAIRLEWKTGLKDIASA 783 Query: 317 -LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHN 374 + + ++ S ++ S+ + + Q K++ A+K + L ++++ Sbjct: 784 MMAKALQDCPISGLLWSET-IFIVDRPQRKTKSVDALKKCEHDPHVLLAVSKLFWTERK- 841 Query: 375 TDKILYWTQSALHAMPD 391 T K W A+ PD Sbjct: 842 TQKCREWFNRAVKIDPD 858 >gi|224078337|ref|XP_002197944.1| PREDICTED: similar to U5 snRNP-associated 102 kDa protein [Taeniopygia guttata] Length = 938 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 576 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 633 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 634 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 693 Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + + LK C +SI + ++ Sbjct: 694 LCEEALKHYEDFPKLWMMKGQIEEQKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKV 753 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P++ L + + A L +E S ++ Sbjct: 754 GQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 811 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 812 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 869 Query: 391 D 391 D Sbjct: 870 D 870 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 285 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 341 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 342 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 393 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 394 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 446 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 447 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 492 >gi|83860015|ref|ZP_00953535.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633] gi|83852374|gb|EAP90228.1| TPR domain protein [Oceanicaulis alexandrii HTCC2633] Length = 649 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 15/235 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R+G A A KAL P P +T + + AI + + ++ Sbjct: 34 RRLGRPADALNLARKALRQFPGHPGLTLEAARSEAATGQLDAAIARMEALARARPDFPPA 93 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L R +G + + S + A+ LI K +AE +L Sbjct: 94 WRTLAELRERAGDAEG-ALEAAKQQAASAAQSPELLEAA-----RLIQDGKLGRAEALLR 147 Query: 285 KIWKVNPH-----PEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 K +P +A++ L + E++ L+RAL L + + + +++ Sbjct: 148 PYVKAHPTDVSGIRLLADVALRLGVFEDSRKLLERALELA---PDFHMARHDYANCLIKL 204 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 ++A + + P + +L + + + + + L PD Sbjct: 205 QRFEEAETQLDRLERAEPDRPSHAILKALLRVRTGHHQEACEIYARILKDNPDQA 259 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 65/203 (32%), Gaps = 10/203 (4%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A + + E LLE + + + A L ++ T Sbjct: 104 AGDAEGALEAAKQQAASAAQSPE----LLEAARLIQDGKLGRAEALLRPYVKAHPTDVSG 159 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L + R+G +++ +AL+++PD + + + A T L++ ++ Sbjct: 160 IRLLADVALRLGVFEDSRKLLERALELAPDFHMARHDYANCLIKLQRFEEAETQLDRLER 219 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + I ++L G + LK + + +L + ++ Sbjct: 220 AEPDRPSH----AILKALLRVRTGHHQEACEIYARILKDNPDQARIQLSYGHALKTIGQR 275 Query: 277 RKAEVILEKIWKVNPHPEIANIY 299 A P + Y Sbjct: 276 EDAVAAYRAAITAEPT--LGEAY 296 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 85/262 (32%), Gaps = 11/262 (4%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A ++ F + L + A Q + A ++E + + A + Sbjct: 37 GRPADALNLARKALRQFPGHPGLTLEAARSEAATGQLDAAIARMEALARARPDFPPAWRT 96 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NA 218 L R GD A A + + +P + EA + + + RA L K + Sbjct: 97 LAELRERAGDAEGALEAAKQQAASAAQSPELLEA--ARLIQDGKLGRAEALLRPYVKAHP 154 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + R + +A L + S +L+L + MA A LI + + Sbjct: 155 TDVSGIRLLADVALRLGVFED-----SRKLLERALELAPDFHMARHDYANCLIKLQRFEE 209 Query: 279 AEVIL---EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 AE L E+ P I + + + + R+ + N + + Sbjct: 210 AETQLDRLERAEPDRPSHAILKALLRVRTGHHQEACEIYARILKDNPDQARIQLSYGHAL 269 Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357 +G + A A A+ P Sbjct: 270 KTIGQREDAVAAYRAAITAEPT 291 >gi|332524931|ref|ZP_08401117.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2] gi|332108226|gb|EGJ09450.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2] Length = 925 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 78/269 (28%), Gaps = 11/269 (4%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-AQRYATKALD 182 LL +A+ ++ A E L+ + + L S +G A + Sbjct: 376 LLLASAQIAQGRHTRAAATAEQALRTQDS--APMRGLLGLSLAVGGRVPDALDALEASFK 433 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P A+ Q + A + RA L ++ + +A LL A GD Sbjct: 434 ADPKQLATGTALAQIRLQAGDTRRATQVLQTLLQH----HPKQAGLLNLLGSAKARGGDA 489 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK---VNPHPEIANIY 299 + ++L + + + A+ K A+ L++ P +A Sbjct: 490 AGARQAFEQALVVDPAFVSPQVQLARLDADAGKFDAAQQRLQQALAKDDKALEPTLAMAQ 549 Query: 300 THLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + ++I ++ + + + L G + A AP Sbjct: 550 LAERRGRLDDARRWYEKADDIAGPNVIDPALELVEFLLRQGQPEAAREAGKRLSNRAPEA 609 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALH 387 L+ + + A Sbjct: 610 VPVLIALARISLANDDEAGARTGLNRAST 638 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 91/295 (30%), Gaps = 12/295 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + AR+ V L ++ +++ A ++L+ L Sbjct: 484 ARGGDAAGARQAFEQALVVDPAFVSPQVQL--ARLDADAGKFDAAQQRLQQALAKDDKAL 541 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ + R G L+ A+R+ KA DI+ P+ +V+ + + A + Sbjct: 542 EPTLAMAQLAERRGRLDDARRWYEKADDIAGPNVIDPALELVEFLLRQGQPEAAREAGKR 601 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 A E +LIA + + D + + L D+ + A A + Sbjct: 602 LSNRAPEA----VPVLIALARISLANDDEAGARTGLNRASTLADHDVGALARIAVLQLQA 657 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVI 330 N + A+ L K P+ + KRA + N + + Sbjct: 658 NHPQGAQHTLTKALTERPNSLPLQALMVDAEIRLGELAAAEKRARTIATQNPKLAVGPSL 717 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL-AQIEQANSHNTDKILYWTQ 383 + +A G A A ++ P + LL A Q W Sbjct: 718 LGDVATARGQRAAAIDAYRTAHRLQPGTDTLLRLLRATAPQDPQGAQKLAEQWLA 772 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 62/228 (27%), Gaps = 24/228 (10%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L +A A Q A + ++ + + + D AQ+ A + L Sbjct: 717 LLGDVATARGQRAAAIDAYRTAHRLQPGTDTLLR--LLRATAPQDPQGAQKLAEQWLASH 774 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMI 243 P V + Y +W A K ++ + + + Sbjct: 775 PRDAVVRRVLADGYARLGQWPAARDAYQALLKLTPEDAEAWNNLAHVQL------RQKDG 828 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 A+ A +L L A + + KA L + +P Sbjct: 829 AALASAERALALKPGVPHIVGTAGWAAFHAGQTDKALQRLREARLRDP------------ 876 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 N + A L S E+ + + AL + +A L Sbjct: 877 -GNPTTRFYLATVLARSG-RSAEAREEL-QAALRSQNFAEAQDAQALL 921 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 64/185 (34%), Gaps = 9/185 (4%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 +A+ +L +++ + + I S N DK + L+ A++ Sbjct: 322 EKALPYLEAVQRSQPGSGAAKLVAQIQISQNNLDK-----AIESLEGYLRRNPADTQATL 376 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A + I+Q + +A E+ + P + + + L + + Sbjct: 377 LLASAQIAQGRHTRAAATAEQALRTQDSAPMRGLLGLSL-AVGGRVPDALDALEASFKAD 435 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + + + +++I L+ G +A ++ P++ L L +A + Sbjct: 436 PKQLATGTALAQIRLQAGDTRRATQVLQTLLQHHPKQAGLLNLLGSAKARGGDAAGARQA 495 Query: 382 TQSAL 386 + AL Sbjct: 496 FEQAL 500 >gi|261867397|ref|YP_003255319.1| HemY protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412729|gb|ACX82100.1| HemY protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 416 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 13/170 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R++ ++ + + +S V I + + S I +++ FF+ A L+++ Sbjct: 1 MVRVLFLMLLLLAGLIAGPYLSGKQGYVRIETASNIIEMS---ITTLVIFFVIALALVYS 57 Query: 61 V---SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 + F + +R K K GLM + + A K+ ++ Sbjct: 58 IEVAISRFFRLSNNTYSWFSRRKRAKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SD 115 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 L ++ + A A+ L I AT SL E R Sbjct: 116 EPVLNFIKAAEAAQQRGDEFSANRYL-----IEATEIAGSDSLILEIART 160 >gi|119505039|ref|ZP_01627115.1| TPR domain protein [marine gamma proteobacterium HTCC2080] gi|119459021|gb|EAW40120.1| TPR domain protein [marine gamma proteobacterium HTCC2080] Length = 403 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 111/355 (31%), Gaps = 60/355 (16%) Query: 59 FAVSR-----FFLSC----PAMLFH---MLHKRNYDKGYKALYTGL----------MSIA 96 + + R P+ + L + D A L +++ Sbjct: 18 WWLGRRGNRPLIWGSSAQPPSEYYRGLNFLLDGSQDNAIDAFTQALEVNAETFDTHIALG 77 Query: 97 A-----HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQI 149 + A ++H + + + L +L + ++ + A + L ++ Sbjct: 78 NVLRRRGEVERAIRVHQNLLARPSLPQTQLHLAHLELARDYISAGLLDRAEKLLIDLVAE 137 Query: 150 PAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 R A L D ++A A + ++ + L K A Sbjct: 138 SGNHRRVARRHLLEIYEAQRDWSAACDVAEE--------------LLPKRSLIKSADNAA 183 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + A ++ +GD ++L+ + A++ Sbjct: 184 DEV------GQPVGVLLAHYYCEQAELARVRGDYGEGRELLAKALRYDKVCVRATLSLGA 237 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-- 326 +S + ++ IL+ ++ P +A + T L+ E + L L + E Sbjct: 238 LELSAGQPEQSIKILKTVFDQGPE-YLAEV-TPLMRE-AMDSLGIRKNLRSYLEGCFERT 294 Query: 327 --SLVIVSKIALEMGSI--DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTD 376 + + ++ G+I D A L++K P + LL++ + + + + Sbjct: 295 PTTPLALAIAHELHGTIGNDAAKKFLRLSLKDKPSLRGVALLMSLHDSTEAGDDE 349 >gi|301160155|emb|CBW19675.1| putative polysaccharide biosynthesis protein subunit C [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323131976|gb|ADX19406.1| cellulose synthase subunit BcsC [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 1180 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLA--------------------------------RKMHSY 109 D ++A G+ ++ A A R + + Sbjct: 290 DPAFRARSQGIAAVNAGEGGKAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 349 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 350 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 410 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 469 Query: 214 KKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 470 SQRRSIDDIELSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 529 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 530 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 589 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 590 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIALTLAD 634 >gi|83415184|ref|NP_787057.2| transmembrane and TPR repeat-containing protein 1 isoform 2 [Homo sapiens] gi|269849473|sp|Q8IUR5|TMTC1_HUMAN RecName: Full=Transmembrane and TPR repeat-containing protein 1 gi|119617007|gb|EAW96601.1| hCG2009560, isoform CRA_d [Homo sapiens] Length = 774 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 382 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 438 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 439 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 498 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 499 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 558 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 559 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 614 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 615 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 673 Query: 389 MPDP 392 DP Sbjct: 674 PKDP 677 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 515 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 572 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 573 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 630 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 631 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 684 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 685 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 720 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 721 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 762 >gi|296115892|ref|ZP_06834516.1| cellulose synthase protein C [Gluconacetobacter hansenii ATCC 23769] gi|295977580|gb|EFG84334.1| cellulose synthase protein C [Gluconacetobacter hansenii ATCC 23769] Length = 1268 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 108/311 (34%), Gaps = 37/311 (11%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + + R++ + + + E L + AL+ + + A +Q A+ Sbjct: 279 DGEMRRRLATVEAARA--QAERLALVGAGYHALSHGELDQAESDFHNSMQSDPPHAEALE 336 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE------WS------- 205 L + R GDL SA+ + T+AL+++P + +A+ + W+ Sbjct: 337 GLGLVAQRRGDLKSARNFLTQALNLAPGNAGIRDALAGLDAPGGDPQLARLWALVAHHEY 396 Query: 206 -RAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A L +K + + + R +I +S + L+L + A+ Sbjct: 397 EEAWAMLPAVEKDHGRIVDTLRVRAIIEQSRHQLGD-----AEAAWRGVLRLVPGDMPAA 451 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEI 320 + L+ + K +AE + ++ K +P + + ++E KR + LE+ Sbjct: 452 ASLSDVLVEEGKIHEAEGWIARL-KAARYPGVTALESGVLGAMAEAETDPRKRIVLLEQA 510 Query: 321 NKESVES---LVIVSKIALEMGSIDQAHAKAM----LAMKIAPRKEIFLLLAQIEQANSH 373 +++ + + +++ G +A K+ + + A Sbjct: 511 LRDAPHNGWLRLHLAQAWWVQGQPTRARNLMAVLCDPLPKMNGDVQACFIFA----LQDQ 566 Query: 374 NTDKILYWTQS 384 + + Sbjct: 567 DMPRADALLAR 577 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 28/195 (14%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A +AL I PD + V + A L Sbjct: 69 GDDAHALHALQRALRIEPDNIEARLMLGAVQVHHGDLIAARATLQ--------------- 113 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 I ++ + D +A+ I + ++ A+++ + K +A + ++ Sbjct: 114 --ILQAQQGTDA--QVAALRGWIGQEPIDPG----ALANARAVADRGKPLQATLAYRTVF 165 Query: 288 K-VNPHPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKI-ALEMGSID 342 + +P PE Y +L+ + + ++R L I +E + +++ + S Sbjct: 166 RAAHPLPEQELEYDRVLAGSLLGYGEAIQRLRALGAIFPHDLEVRMALAQALSYRAASRP 225 Query: 343 QAHAKAMLAMKIAPR 357 A + Sbjct: 226 DAIEDMRVLATSPTT 240 >gi|15229253|ref|NP_187074.1| SEC (secret agent); transferase, transferring glycosyl groups [Arabidopsis thaliana] gi|75336082|sp|Q9M8Y0|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gi|6721161|gb|AAF26789.1|AC016829_13 putative O-linked GlcNAc transferase [Arabidopsis thaliana] gi|18139887|gb|AAL60196.1|AF441079_1 O-linked N-acetyl glucosamine transferase [Arabidopsis thaliana] gi|20259324|gb|AAM13988.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana] gi|21436429|gb|AAM51415.1| putative O-linked GlcNAc transferase [Arabidopsis thaliana] gi|110742062|dbj|BAE98963.1| O-linked GlcNAc transferase like protein [Arabidopsis thaliana] gi|332640535|gb|AEE74056.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] Length = 977 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 89/269 (33%), Gaps = 21/269 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + V Q++ + L L+ + E + P + Sbjct: 67 GDFKQALEHSNMVYQRNPLRTDNL-LLIGAIYYQLQEYDMCIARNEEALRIQP--QFAEC 123 Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y + GD + A RY A+++ P+ + Y+ S A Q Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALS 183 Query: 217 NAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + N L+ A+ L + +Y +E++++ +A A + Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIH-------EAYSCYLEAVRIQPTFAIAWSNLAGLFMES 236 Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +A ++ K+ P P+ + N+Y L + ++ S + Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKAL--GRPTEAIMCYQHALQMRPNSAMAF 294 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ I E G +D A A+ PR Sbjct: 295 GNIASIYYEQGQLDLAIRHYKQALSRDPR 323 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 14/186 (7%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L L++ Q + A+ ++I T A +L GDLN A +Y +A Sbjct: 195 LGNLMKAQ-----GLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEA 249 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P P + Y + AI + A+ + ++G Sbjct: 250 VKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNS----AMAFGNIASIYYEQG 305 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295 + + ++L + A +L + +A + + P HP+ + Sbjct: 306 QLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANL 365 Query: 296 ANIYTH 301 NIY Sbjct: 366 GNIYME 371 >gi|222423063|dbj|BAH19513.1| AT3G04240 [Arabidopsis thaliana] Length = 750 Score = 54.9 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 89/269 (33%), Gaps = 21/269 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + V Q++ + L L+ + E + P + Sbjct: 67 GDFKQALEHSNMVYQRNPLRTDNL-LLIGAIYYQLQEYDMCIARNEEALRIQP--QFAEC 123 Query: 158 YSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y + GD + A RY A+++ P+ + Y+ S A Q Sbjct: 124 YGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALS 183 Query: 217 NAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + N L+ A+ L + +Y +E++++ +A A + Sbjct: 184 LNPLLVDAHSNLGNLMKAQGLIH-------EAYSCYLEAVRIQPTFAIAWSNLAGLFMES 236 Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +A ++ K+ P P+ + N+Y L + ++ S + Sbjct: 237 GDLNRALQYYKEAVKLKPAFPDAYLNLGNVYKAL--GRPTEAIMCYQHALQMRPNSAMAF 294 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ I E G +D A A+ PR Sbjct: 295 GNIASIYYEQGQLDLAIRHYKQALSRDPR 323 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 14/186 (7%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L L++ Q + A+ ++I T A +L GDLN A +Y +A Sbjct: 195 LGNLMKAQ-----GLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEA 249 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P P + Y + AI + A+ + ++G Sbjct: 250 VKLKPAFPDAYLNLGNVYKALGRPTEAIMCYQHALQMRPNS----AMAFGNIASIYYEQG 305 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295 + + ++L + A +L + +A + + P HP+ + Sbjct: 306 QLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANL 365 Query: 296 ANIYTH 301 NIY Sbjct: 366 GNIYME 371 >gi|303251060|ref|ZP_07337246.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650070|gb|EFL80240.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 416 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + +S V I ++ S +++ + + Sbjct: 1 MFRVLFLMLLLLASLIFGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F ++ R + K + GLM ++ + A K+ S ++ +E Sbjct: 61 IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 ++ L++ + A A++ L + G N A A Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160 Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + + P A +++++ + + K++K +N IL Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210 >gi|221127660|ref|XP_002161502.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 984 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 97/280 (34%), Gaps = 17/280 (6%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAH 140 GY L L++ A ++ A + ++ L LL+ + A Sbjct: 120 GYINLAAALVA--AGDLEGAVQAYATALNYNPDLYCVRSDLGNLLKA-----LGRLEEAK 172 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 ++ A +L ++ A + KA+ I P+ + Sbjct: 173 ACYLKAIETQPNFAVAWSNLGCVFNAQSEIWLAIHHFEKAVQIDPNFLDAYINLGNVLKE 232 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A+ + RA+T + N AI+ + ++G + + +++L N Sbjct: 233 ARIFDRAVTAYLRALTINP----NHAIVHGNLACVYYEQGLIDLAVDTYKRAIELQPNFP 288 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTV--GKLKRALRL 317 A A +L Q K AE + ++ P H + N ++ E + ++ + Sbjct: 289 DAYCNLANALKEQGKVEDAEDCYDTALQLCPTHADSLNNLANIKREQGLIEDSIRLYCKA 348 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E+ E + ++ I + G + +A A++I P Sbjct: 349 LEVFPEFAAAHSNLASILQQQGKLHEALIHYKEAIRIHPT 388 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + Q H + L L I + + + + P A Sbjct: 302 GKVEDAEDCYDTALQLCPTHADSLNNL--ANIKREQGLIEDSIRLYCKALEVFPEF-AAA 358 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L+ A + +A+ I P + ++ AI ++ + Sbjct: 359 HSNLASILQQQGKLHEALIHYKEAIRIHPTFADAYSNMGNALKEMQDVEGAIQCYSRAIQ 418 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + D G++ + +LKL + A A L Sbjct: 419 INPAF----ADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPDAYCNLAHCL 468 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 66/217 (30%), Gaps = 26/217 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A + + LQ+ T ++ +L G + + R KAL++ P+ Sbjct: 295 ANALKEQGKVEDAEDCYDTALQLCPTHADSLNNLANIKREQGLIEDSIRLYCKALEVFPE 354 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS---LENADKGDMI 243 + + L++ + KE R A S + D+ Sbjct: 355 FAAAHSNLASILQQQGK-------LHEALIHYKEAIRIHPTFADAYSNMGNALKEMQDVE 407 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANI 298 + ++++ A A +A + K+ P P+ +A+ Sbjct: 408 GAIQCYSRAIQINPAFADAHSNLASVYKDSGNIAEAIQSYKTALKLKPDFPDAYCNLAHC 467 Query: 299 YTHLLSENTVG-KLKRA----------LRLEEINKES 324 + + ++K+ RL ++ Sbjct: 468 LQIICDWSGYDNRMKKLLAIVDEQLGKNRLPSVHPHH 504 >gi|182412316|ref|YP_001817382.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177839530|gb|ACB73782.1| TPR repeat-containing protein [Opitutus terrae PB90-1] Length = 586 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 56/327 (17%), Positives = 119/327 (36%), Gaps = 35/327 (10%) Query: 93 MSIAAHNIPLAR---KMHSYVSQQHTFHNEYLVYLLE-----------VQIALAERQYNI 138 + AA + A+ ++ ++ + ++ LLE Q AE++ ++ Sbjct: 216 LHAAAGDPVRAQQEQRLLERADRRLGMPDPWMEELLEHCYEPNRLQRAAQRFAAEKRLDL 275 Query: 139 AHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 A L + T A+ L S RI D A+ +AL PD P V A+ Sbjct: 276 AESLLRRATSLSPADPTPRSALAQLLVSSERIRD---ARTVLEQALVECPDEPMVPIALA 332 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + + + + W A L A D + + E+L+L Sbjct: 333 RVLCQEH---KPLEAVAIAQAALACWP-EHAGLHAAVGYAWRDARENETALAALREALRL 388 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGKLK 312 + A A L++ ++ A+V +++ + P +PE + L + + + Sbjct: 389 NPTLVEAQYNLAFCLMALRQREAAQVAVQRALTLRPDYPEALVMLGGLELDNGDVAAAQR 448 Query: 313 RALRLEEINKESVESLVIVSKI-------ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 L L E+ + S ++ + + A + ++A + ++++P+ L Sbjct: 449 HILALFELRPDEPGSRLLYAALHHELGNRARDERKFEEADRRYRAGLEVSPQFAPLLHEG 508 Query: 366 QIEQANSHNTDKILYWTQSALH-AMPD 391 + A +++ W + L A D Sbjct: 509 ALLAARRAQYGQVVEWLERYLRLAPRD 535 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 70/199 (35%), Gaps = 18/199 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + +A +AL ++P + + ++ A + + ++ A++ Sbjct: 374 ENETALAALREALRLNPTLVEAQYNLAFCLMALRQREAAQVAVQRALTLRPDYP--EALV 431 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286 ++ D GD+ A+ + +L + + + A + + E E+ Sbjct: 432 MLGGL--ELDNGDVAAAQRHILALFELRPDEPGSRLLYAALHHELGNRARDERKFEEADR 489 Query: 287 -WKVNPHPEIANIYTHLLSENTVGKLKRA---------LRLEEINKESVESLVIVSKIAL 336 ++ E++ + LL E + +RA R + +E+ +++++ Sbjct: 490 RYRAGL--EVSPQFAPLLHEGALLAARRAQYGQVVEWLERYLRLAPRDLEAYILLAEAYR 547 Query: 337 EMGSIDQAHAKAMLAMKIA 355 E+ + ++A Sbjct: 548 EIQRPELLERALERGSEMA 566 >gi|27469599|gb|AAH42083.1| Transmembrane and tetratricopeptide repeat containing 1 [Homo sapiens] Length = 774 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 382 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 438 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 439 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 498 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 499 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 558 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 559 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 614 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 615 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 673 Query: 389 MPDP 392 DP Sbjct: 674 PKDP 677 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 94/282 (33%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 515 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 572 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 573 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 630 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 631 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 684 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ +L ++N + ++ + Sbjct: 685 FTKGNQLREQNLLDKAFESY-------------------RLA-----VQLNPDQAQAWMN 720 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 721 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 762 >gi|188575020|ref|YP_001911949.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519472|gb|ACD57417.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 418 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 113/363 (31%), Gaps = 29/363 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56 M ++ ++L + +SH +V ++ G YR + L +L + Sbjct: 1 MRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLW 60 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 LL+ + + K KG L GL + A ++ S+ Sbjct: 61 LLWTLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEV 113 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYF----ESCRIGD 169 L V++A A A + + + T L E+ D Sbjct: 114 SGIALAS--AVRVADARGDEAAATALAQQLAERDPTAYALLQGERHLARQRPVEAINALD 171 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 +AQ + L + T A+ Q + + + Q ++ A L Sbjct: 172 SANAQPLPARGLLLR------THALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLA 225 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 L+ +D + + ++L+ C + A A L + A LE+ Sbjct: 226 EQTLLQASDANALAERWEALPKALRTCPAVVGAYAQRAAVLHWDD---AAVHSLEQALDA 282 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + +Y L E + A R +S L+ ++++A QA Sbjct: 283 QWDESLVRLYGVLPLEKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLH 342 Query: 350 LAM 352 A+ Sbjct: 343 RAI 345 >gi|126208481|ref|YP_001053706.1| HemY-like protein [Actinobacillus pleuropneumoniae L20] gi|126097273|gb|ABN74101.1| HemY-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 416 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + +S V I ++ S +++ + + Sbjct: 1 MFRVLFLMLLLLASLIFGPYLSGNQGYVRIETDTKVIEMSLVMLVVFFVIAMAVVYSIEV 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + F ++ R + K + GLM ++ + A K+ S ++ +E Sbjct: 61 IISRFCRLSKGSYNWFFNRKHKKAQQETLEGLMRMSEGDYSKAEKLFSKNAKHA---DEP 117 Query: 121 LVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 ++ L++ + A A++ L + G N A A Sbjct: 118 VLNLIKAAEAAQQGGDEFNANKY-----------------LIEAAELAGPNNVAVELART 160 Query: 180 ALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + + P A +++++ + + K++K +N IL Sbjct: 161 RILVQQNKLPAARSAIDSLIELAPRN---TEVLRLAINIYKDSKAYNALDGIL 210 >gi|188996284|ref|YP_001930535.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931351|gb|ACD65981.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 557 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 96/266 (36%), Gaps = 22/266 (8%) Query: 103 ARKMHSYVSQQHTFHNE--YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A+K Y+ + + + LL +I Y+ A E + +L+ A+ L Sbjct: 180 AQKAEEYLKKSLQIDKKYKPVWQLL-GEIYRQSGNYDKAIEIYKNILKDDPNNLEALNRL 238 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + D N+A K + ++P Y+ + + + L + + + Sbjct: 239 FQIYVDKDDFNNAAETIDKIIRLNPKDNDAILKKFLLYIKYGKSNEILQDLKKSSQENPD 298 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + ++ + E + D + E K ++ ++ + KA Sbjct: 299 NPFLK--FMLGMAYETLE--DYQNAKAIYEELYKQQPDNQELIDRLVSVYLNLKEYDKAL 354 Query: 281 VILEKIWKVNPHPEIANIYTHLLS----ENTVGKLKRALRLE----EINKESVESLVIVS 332 IL K++ NP Y LLS E+ G +KRAL L I + I + Sbjct: 355 EILNKLYVQNP-----KDYKILLSMADIEDKKGNIKRALELVKEAESIAPDDPTVHFIKA 409 Query: 333 KIALE-MGSIDQAHAKAMLAMKIAPR 357 I L+ +G+ +A ++++ P Sbjct: 410 -IYLDKLGNWQEAEKSLYKSLELRPD 434 >gi|254490577|ref|ZP_05103763.1| tetratricopeptide repeat domain protein [Methylophaga thiooxidans DMS010] gi|224464321|gb|EEF80584.1| tetratricopeptide repeat domain protein [Methylophaga thiooxydans DMS010] Length = 393 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 8/171 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIP------ATREFAVYSLYFESCRIGDLNSAQR 175 +L + + + A + ++ P T+ L + G L+ A++ Sbjct: 71 THLALANLFRRRGETDRAIRIHQNLIARPTLSSPQRTQALVELGL--DYMNAGVLDRAEQ 128 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + L SP + +++ Y K+W +AI + + K E Sbjct: 129 LFLELLQQSPSPDEAPKQLLRIYQQEKKWQQAIDMAKRITPDKKTNTNALIAQFYCELAE 188 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 D + + + + +N + AS+ K LI + RKA L+K+ Sbjct: 189 PLANKDHHQALNLLRSAQQYDNNCVRASLLEGKILIQIRQYRKAMRALQKV 239 >gi|167627541|ref|YP_001678041.1| hypothetical protein Fphi_1315 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597542|gb|ABZ87540.1| conserved hypothetical membrane protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 385 Score = 54.6 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 31/76 (40%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R+ + V+ L I + + + ++ + + + +++ LF + F Sbjct: 1 MIRIFKLIIVVVLATLIGIWATKNHGYIMLVMADKAIKVNLVAFVFVVFILLFVLVFGFR 60 Query: 61 VSRFFLSCPAMLFHML 76 V + P +LF+ Sbjct: 61 VIKLSFQLPYLLFNWF 76 >gi|204928563|ref|ZP_03219762.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321996|gb|EDZ07194.1| cellulose synthase operon protein C [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 1172 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 52/345 (15%), Positives = 98/345 (28%), Gaps = 60/345 (17%) Query: 82 DKGYKALYTGLMSIAAHNI--------------------------------PLARKMHSY 109 D ++A G+ ++ A AR + + Sbjct: 282 DPAFRARSQGIAAVNAGEGGNAIAQLQQAVSARQDDSEAVGALGQAYSQRGDRARAVAQF 341 Query: 110 VSQQHTFHN-------EYLVY-----LLEVQ--IALAERQYNIAHEKLEMMLQIPATREF 155 + E L+ LL Q AL A + + T + Sbjct: 342 EKALAMAPHSSSRDKWESLLKVNRYWLLIQQGDAALKANNLAQAERFYQQARAVDNTDSY 401 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQ 213 AV L + D +A+RY + L + + Y A I L+ Sbjct: 402 AVLGLGDVAMARKDNAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKAAAFIASLSA 461 Query: 214 KKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ + + L ++ +G + L L S+ + ++ L Sbjct: 462 SQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRRRLALDPGSVWVTYRLSRDLW 521 Query: 272 SQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK--LKRALRL--EEINKESVE 326 + +A+ + + + P+ PE Y LS + + L L + N E Sbjct: 522 QAGQHAQADAQMRSLAQQKPNDPEQVYAYGLYLSGSDRDRAALAHLNTLPTSQWNSNIQE 581 Query: 327 --SLV---IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + A + + L + P I L LA Sbjct: 582 LAGRLQSNQVLESANRLRDSGKEREAEALLRQQPPSTRIELTLAD 626 >gi|297691491|ref|XP_002823118.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like isoform 2 [Pongo abelii] Length = 882 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 490 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 546 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 547 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 667 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 722 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 723 LAQVLAMMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 781 Query: 389 MPDP 392 DP Sbjct: 782 PKDP 785 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 623 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 680 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 681 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAMMGQTKEAEK- 738 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 739 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 792 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 793 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 828 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 829 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 870 >gi|297691489|ref|XP_002823117.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like isoform 1 [Pongo abelii] Length = 944 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 552 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 608 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 609 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 668 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 669 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 728 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 729 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 784 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 785 LAQVLAMMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 843 Query: 389 MPDP 392 DP Sbjct: 844 PKDP 847 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 685 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 742 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 743 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAMMGQTKEAEK- 800 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 801 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 854 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 855 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 890 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 891 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 932 >gi|289192835|ref|YP_003458776.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] gi|288939285|gb|ADC70040.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] Length = 336 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 13/182 (7%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L + A E ++ L+ A++ L + D +A +Y K L+++PD Sbjct: 141 ALLKLNKPKKAMEYFKIALEKDKNNYKALFGLGEAYYNLNDEENAIKYFEKVLELNPDDK 200 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 E + Y +++ RAI + + E + L++ + + + Sbjct: 201 EALEYLGDIY-YEEDYERAINYYKKAL----ELKSDDINLILKIAYSYMELKKYKEALKY 255 Query: 249 AIESLKLCDN---SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYT 300 ++LKL + + I + KA EK+ ++NP+ + IA Y Sbjct: 256 FKKALKLNPDVFKLEEIFEFMGRIYIYLGEDEKAMEYFEKLKEINPYHDEIYEIIALTYE 315 Query: 301 HL 302 + Sbjct: 316 EV 317 >gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102] gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 532 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 91/280 (32%), Gaps = 11/280 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L+ M +Y N+ + + + + A + LQI A + Sbjct: 248 GKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQIDPNYVNAHCN 307 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G L+ A +AL + P+ + + S AI + + Sbjct: 308 LGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQIDP 367 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + ++L +G + + +L++ N A +L Q K +A Sbjct: 368 NY--VNAHCNLGKALHT--QGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEA 423 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 ++ +++P H + + R I+ ++ + Sbjct: 424 IAAYQRALRLDPNDADTHCNLGIALHD--QGKLSEAIAAYQRALLIDPNDADAHCNLGIA 481 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 G +++A A+ +A+++ P + +I + + Sbjct: 482 LKGQGKLEEAIAELEIAVRLNPNNTVIRNNLEIYRNEKNE 521 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 11/229 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + + A + LQI A +L G L+ A +AL + P+ Sbjct: 213 QGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHC 272 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + S AI + + + A + ++L +G + + + Sbjct: 273 NLGIALHDQGKLSEAIAAYQKALQIDPNY--VNAHCNLGKALHT--QGKLSEAMAAYQRA 328 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307 L++ N A +L Q K +A +K +++P H + Sbjct: 329 LRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALH--TQGKL 386 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + R ++ + + G + +A A A+++ P Sbjct: 387 SEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQRALRLDP 435 >gi|26989357|ref|NP_744782.1| cellulose synthase subunit BcsC [Pseudomonas putida KT2440] gi|24984215|gb|AAN68246.1|AE016458_11 cellulose synthase operon C protein, putative [Pseudomonas putida KT2440] Length = 1172 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 104/310 (33%), Gaps = 45/310 (14%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 L+ ++ Y L +S+A ++ A + + V + + + L+ V Sbjct: 371 RALYQQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVRRMAPDNESAVRGLMRVYQ 430 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---------ESCRIGDLNSAQRYATKA 180 A + + A L+ + + ++ E+ + D ++A +A Sbjct: 431 AQSPGK---AQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEALQREDWSTASHVLGQA 487 Query: 181 LDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 ++PD PW+ + ++ E A L Q + + L + + Sbjct: 488 SALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQPRDPATRYANGLFLESSDRDAL 547 Query: 238 DKGDMIASYHDAIESLKLCDNSIMAS--------------ICAAKSLISQNKKRKAEVIL 283 A+ESL+ + ++ + +A+ L +Q + +A +L Sbjct: 548 -----------ALESLRAVPQATWSADMHALEQRVQRRMTLASAQQLQAQGRSAEATALL 596 Query: 284 EKIW-KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 E + P+ + + E+ + L + ++ + V + A+ G Sbjct: 597 EAGLARGEGSPDDLMLLADWAAARGEHGKARSYYQRVLV-VQPGRPDARLGVMESAVAEG 655 Query: 340 SIDQAHAKAM 349 ++ QA Sbjct: 656 NLQQARHMLG 665 >gi|326430659|gb|EGD76229.1| PRP6 pre-mRNA processing factor 6 [Salpingoeca sp. ATCC 50818] Length = 926 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 30/299 (10%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCR 166 ++L+ + A A + AV Sbjct: 585 KAVKYCPQAETLWLMGAKSAWLGGNVPAARNILLHAFTAIPNNEDIWLAAV----KLESE 640 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW-----SRAITFLNQKKKNAKEW 221 + A+ +A A V EW A L K Sbjct: 641 NNEHQRARGLLERARR------EAGTARVWMKSARLEWVLGNLDAASEMLADAVKLHPTA 694 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L + R + + + + + +K C +SI I +A+ ++ + +A Sbjct: 695 PK----LWMMRGQISEQQDKVEDARQFYAQGVKNCPDSIPLWILSARLELAAGQATRARA 750 Query: 282 ILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 ILE+ NPH PE+ + + ++ A+ + + ++ S ++ S+ A+ M Sbjct: 751 ILERGRLKNPHCPELWLESVDIERQLGQPEVATAI-MAKALQDCPNSGLLWSE-AIFMEP 808 Query: 341 IDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD--PLWIS 396 Q K++ A+K + L +A++ ++ K W + PD W + Sbjct: 809 RPQRKTKSLDALKRCENDARVLLAVAKLLLSDRR-ITKARRWFNRTVKLDPDYGDAWAA 866 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 6/163 (3%) Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296 + G + +++K C + + AKS A IL + P + +I Sbjct: 572 EHGTRESLDEHLRKAVKYCPQAETLWLMGAKSAWLGGNVPAARNILLHAFTAIPNNEDIW 631 Query: 297 NIYTHLLSENTV-GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L SEN + + L + + +++ +G++D A A+K+ Sbjct: 632 LAAVKLESENNEHQRARGLLERARREAGTARVWMKSARLEWVLGNLDAASEMLADAVKLH 691 Query: 356 PRKEIFLLL-AQIEQANSHNTDKILYWTQSALHAMPD--PLWI 395 P ++ QI + + + + PD PLWI Sbjct: 692 PTAPKLWMMRGQISEQQDK-VEDARQFYAQGVKNCPDSIPLWI 733 >gi|167645819|ref|YP_001683482.1| sulfotransferase [Caulobacter sp. K31] gi|167348249|gb|ABZ70984.1| sulfotransferase [Caulobacter sp. K31] Length = 725 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 92/310 (29%), Gaps = 42/310 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GLM+ A N+ LA + +YL L ++ + A + + + Sbjct: 51 GLMAHAYGNLDLAIDHLRHACLAPRAPAQYLSNL--AEMCRQAGRLAEAEQAARRSVSMD 108 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 ++ +L G L + + + + PD + +A Sbjct: 109 SSLVAGWNNLGIVLQEAGKLEESLTCLERVVALQPDYAEAHNNLGNTLKRLGRLDQARAR 168 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 Q K A + A L S D G + A ++ A I AA Sbjct: 169 YEQALKLAPAY----AEALSNLSNLLNDLGLSDEALASARRAIDANPRLSDAYINAAAVE 224 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +++++ + W + +Y L + + RL +++ VE+ Sbjct: 225 VARDRYDEGLR-----WV-----DALLVYAPLHAGALGVRATILRRLGRLDEALVEARRA 274 Query: 331 VSKI-----AL---------------EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 ++ AL + + D+A A + A LL+ Sbjct: 275 LATAPDNGEALNTLGEVLQAQDKMDEALAAYDRAAQSLGFAPEKALVNRAILLM------ 328 Query: 371 NSHNTDKILY 380 +T+ Sbjct: 329 ERGDTEAAKA 338 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 80/221 (36%), Gaps = 16/221 (7%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G ++ A+R + L + P ++ A + ++A R A Sbjct: 23 AGQVDQAERLCQQVLALWPGQSDALH-LMGLMAHA---YGNLDLAIDHLRHACLAPRAPA 78 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + G + + A S+ + + + L K ++ LE++ Sbjct: 79 QYLSNLAEMCRQAGRLAEAEQAARRSVSMDSSLVAGWNNLGIVLQEAGKLEESLTCLERV 138 Query: 287 WKVNPHPEIANIYTHLLSENTVGKL-------KRALRLEEINKESVESLVIVSKIALEMG 339 + P+ A + +L NT+ +L R + ++ E+L +S + ++G Sbjct: 139 VALQ--PDYAEAHNNL--GNTLKRLGRLDQARARYEQALKLAPAYAEALSNLSNLLNDLG 194 Query: 340 SIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKIL 379 D+A A A A+ PR ++ A +E A + + Sbjct: 195 LSDEALASARRAIDANPRLSDAYINAAAVEVARDRYDEGLR 235 Score = 36.8 bits (84), Expect = 9.0, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 32/87 (36%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R+G L+ A A +AL +PD + + + A+ ++ ++ Sbjct: 259 RRLGRLDEALVEARRALATAPDNGEALNTLGEVLQAQDKMDEALAAYDRAAQSLGFAPEK 318 Query: 225 RAILLIARSLENADKGDMIASYHDAIE 251 + +E D A++ D +E Sbjct: 319 ALVNRAILLMERGDTEAAKAAFDDVLE 345 >gi|220932028|ref|YP_002508936.1| TPR repeat-containing protein [Halothermothrix orenii H 168] gi|219993338|gb|ACL69941.1| TPR repeat-containing protein [Halothermothrix orenii H 168] Length = 394 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 14/200 (7%) Query: 134 RQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + N+A E M + R +L D A + ++ I+PD + Sbjct: 188 GKVNLAINTYEKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKINPDFVAI 247 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + + Y L+ + A + + + + + + + Sbjct: 248 STKLGEAYYLSGNYELAREEFEKVVSINDKSYK----AYYYLGKIHEINHNEDKAIYYYK 303 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSE 305 ++LK A I I Q+K A + NP +P+ +A Y L E Sbjct: 304 QALKYNPEYASAYIALGDIYIRQDKPYLAISHYSTAIEKNPNYPDSHFHLAVTYYILEME 363 Query: 306 NTVGKLKRALRLEEINKESV 325 + + + +N Sbjct: 364 DAA--IAELKKTLHLNPNHR 381 >gi|289615482|emb|CBI57723.1| unnamed protein product [Sordaria macrospora] Length = 969 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 88/264 (33%), Gaps = 35/264 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E ++ A+ +A +PD+ + A V+ +A L ++NA Sbjct: 644 LAREKAADAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARELLKTARQNAP 703 Query: 220 E---------WNRNR-----AILLIARSLEN---------------ADKGDMIASYHDAI 250 + R + A+ L+ ++L D + Sbjct: 704 TDRVWMRSVAFERQQGDNEAALDLVQQALPLFPAKPKLWMIKGQIYEDLSQPGPAREAYS 763 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309 ++ +SI + ++ KA +L++ + P PE+ + E G Sbjct: 764 TGVRAVPSSIPLWLLYSRLEEKAGNVVKARSVLDRARQAVPKSPELWTELIRV--ERRAG 821 Query: 310 KLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-I 367 L +A L + +S ++ ++ L + Q + A+K I L+ A I Sbjct: 822 NLNQAKSLMAQALQQMPKSGLLWAERILNLEPRTQRKSLLAEAVKKVEDDPILLVTAARI 881 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 A D+ W + AL D Sbjct: 882 LWAERK-LDRAQNWFEKALLLDRD 904 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 72/232 (31%), Gaps = 8/232 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 S +A+ A+ + P++ + A + L + + + Sbjct: 578 RASINRDKFATARAIYAYAIRVFPNSKSLYTAAIDLERNHGSKEDLWHALEKAVEACPHY 637 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + + + E A + + + K +S + A K KA Sbjct: 638 E----VFWLMLAREKAADAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARE 693 Query: 282 ILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +L+ + P + ++ + L + + + +I +I ++ Sbjct: 694 LLKTARQNAPTDRVWMRSVAFERQQGDNEAALDLVQQALPLFPAKPKLWMIKGQIYEDLS 753 Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A ++ P ++LL +++E+ + N K A A+P Sbjct: 754 QPGPAREAYSTGVRAVPSSIPLWLLYSRLEEK-AGNVVKARSVLDRARQAVP 804 >gi|17552198|ref|NP_498398.1| LEThal family member (let-716) [Caenorhabditis elegans] gi|14573809|gb|AAB47599.3| Hypothetical protein C16A3.3 [Caenorhabditis elegans] Length = 1743 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 19/204 (9%) Query: 161 YFESCRIGDLNSAQRYATKAL-DISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKK 215 DL +A++ A +AL I+P + A + V + + + Sbjct: 1493 MSHFIEKSDLAAARKTAEEALGAINPTESDELLKIWTAYLNMEVAYGDAATVQKVFERAC 1552 Query: 216 KNAKEWNRNRAILLIARSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 KNA + ++ + I + E NA+ ++ + +L A+ L++QN Sbjct: 1553 KNANAYTVHKTLSKIYQKFEKNAEATQILEQMVKKFRANQLE-----VWTLLAEHLMTQN 1607 Query: 275 KKRKAEVILEKIWKVNP----HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVES 327 ++ A +L + K P H ++ + + L + G+ L + + + Sbjct: 1608 DQKAARELLPRALKSAPKAQQHVQLISKFAQLEFKHGDAERGR-TLLEGLVTAHPKKTDL 1666 Query: 328 LVIVSKIALEMGSIDQAHAKAMLA 351 ++ ++ L+ I+ A A Sbjct: 1667 WLVYAEAVLKHLGIEHARKVLERA 1690 >gi|120601596|ref|YP_965996.1| diguanylate cyclase [Desulfovibrio vulgaris DP4] gi|120561825|gb|ABM27569.1| diguanylate cyclase [Desulfovibrio vulgaris DP4] Length = 792 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 21/194 (10%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A E LQ A+Y+L +G+ A+++ K L +P + Sbjct: 606 GRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKHYRKCLKYAPGHVFALVR 665 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Q K +++A + N+ + ++ + + +G + ++L Sbjct: 666 LGQLAEGEKRYAQARQYFNKAARAGDSG----GLVHRNLARLSMRQGRPDEAREHLHDAL 721 Query: 254 KLCDNSIMASICAAKSLISQNK--------KRKAEVI---LEKIWKVNPHPEIANIYTHL 302 +A A+ + + R++ + L++ W E+A Sbjct: 722 LRNPQDAVALQLMARLYLDGGEDPAMAEALSRQSVALRPDLKQGWL-----ELARA-LDA 775 Query: 303 LSENTVGKLKRALR 316 + R Sbjct: 776 RGHVAEAREARLRA 789 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 5/155 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ARK + + H LV L Q+A E++Y A + + + Sbjct: 640 GETAEARKHYRKCLKYAPGHVFALVRL--GQLAEGEKRYAQARQYFNKAARAGDSGGLVH 697 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L S R G + A+ + AL +P + + + Y+ E A+ ++ Sbjct: 698 RNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYLDGGE-DPAMAEALSRQSV 756 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A + + L +AR+L+ +G + + + + Sbjct: 757 ALRPDLKQGWLELARALD--ARGHVAEAREARLRA 789 Score = 37.2 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 41/226 (18%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A AL ++ A + Q + + Sbjct: 572 GDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKP----GDPM 627 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L G+ + + LK + A + + ++ +KR A+ Sbjct: 628 ALYNLGTVCQSLGETAEARKHYRKCLKYAPGHVFALVRLGQL--AEGEKRYAQ------- 678 Query: 288 KVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 A Y + + ++ G + R ++++++ G D+A Sbjct: 679 --------ARQYFNKAARAGDSGGLVHR----------------NLARLSMRQGRPDEAR 714 Query: 346 AKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMP 390 A+ P+ + L L+A++ + + A+ Sbjct: 715 EHLHDALLRNPQDAVALQLMARL-YLDGGEDPAMAEALSRQSVALR 759 >gi|37526324|ref|NP_929668.1| hypothetical protein plu2428 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785755|emb|CAE14802.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 389 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 104/320 (32%), Gaps = 57/320 (17%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +++ R A L + G + A+ + ++ Sbjct: 83 GEVERAIRIHQSLMESASLTFDQRLLATQQLGRDYMSAGLYDRAENMFAQLVNEKDFQEN 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIAS--- 245 ++++ Y +W +AI + K+ K R + A +L+ D+ + Sbjct: 143 AFQSLLTIYQSTSDWKKAIDIAEKLVKSGKHDLREKIAHFYCELALQEMSGDDLDEAIGY 202 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIY 299 + A+++ K C SI + +++ + KA L+ + + + P + Y Sbjct: 203 LNKAVQADKNCAR---VSIMLGRLFMARQEYNKAADALKSVLEQDKQLVSEVLPILQECY 259 Query: 300 THLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 H + LKR + + + ++++ I + + A ++ P Sbjct: 260 QHQNQIDEWENFLKRCVEEDCGAT----AELLLADIIEQQKGHEVAQTYINHRLERHPTM 315 Query: 359 EI-FLLL----AQIEQANSHNTDKILYWTQSALHAM---PD---------PLWISD-DGY 400 + + L+ A+ E+ A ++ D P + G+ Sbjct: 316 RLFYRLMDYHLAEAEEG-------------RAKESIILLRDMVGEQIRTKPNYRCHKCGF 362 Query: 401 LSSV--WLPLSPISKTLCYF 418 S W P ++ Sbjct: 363 TSHSLYWH--CPSCRSWDSI 380 >gi|299133582|ref|ZP_07026776.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] gi|298591418|gb|EFI51619.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] Length = 718 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 14/194 (7%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 RA T ++ E +R L + +G + + + +L+L A+I Sbjct: 513 DRAATEFIAAQRANAERPESRTTLGNFLA----QRGQLQEAEAEYRAALRLSPQYATAAI 568 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLE 318 A + + + E++L +P H + L E + +L +A LE Sbjct: 569 NLADLYRQRGRDSEGEIVLHAALVSSPRDAALHQALGLTLIRLKRPEGALTELHQATELE 628 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDK 377 + + G ++A A+ P+ I L + Sbjct: 629 PYQPRYA---YVYAVALHSSGQYEEAMTVLKNALHNHPKDREILQALVSFSRGAGDAAAA 685 Query: 378 ILYWTQSALHAMPD 391 + Y + A PD Sbjct: 686 LSYAKKLATVGPPD 699 >gi|302811916|ref|XP_002987646.1| hypothetical protein SELMODRAFT_126445 [Selaginella moellendorffii] gi|300144538|gb|EFJ11221.1| hypothetical protein SELMODRAFT_126445 [Selaginella moellendorffii] Length = 938 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 93/303 (30%), Gaps = 46/303 (15%) Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 AL E+ + + E ++ +L+ P + E GD++ A+ T A Sbjct: 565 AALLEKGH-GSREAVDSLLERAVGCCPKAEVLWLLG-AKEKWLAGDIDGARAILTAAYVA 622 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P++ + A + ++E RA L + ++ R + + ++ + G + Sbjct: 623 IPESEEIWLAAFKLEFESREPERARILLAKVRERGGCSER----VWMKSAMVERELGKVA 678 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHL 302 E LK + + A + E+ + +P Sbjct: 679 EERRLLEEGLKRFPGFHKLWLMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAA 738 Query: 303 LSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E G++ +A L KE E + + G +A A A++ R Sbjct: 739 ELEEKGGRIAKARALLTTARLKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQECRRS 798 Query: 359 EIFLL----LA-----------QIEQANSHN---------------TDKILYWTQSALHA 388 I +A ++ + DK W + A+ A Sbjct: 799 GILWAASAEMAPRAQRKARSFDAVKNSEQDPFVVAVVGKFFWQDRKVDKARSWIKRAVAA 858 Query: 389 MPD 391 PD Sbjct: 859 APD 861 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 17/218 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L+ Q+ A E L+ PAT + + G + A+ T A Sbjct: 699 LMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAAELEEKGGRIAKARALLTTAR 758 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P + A ++ A +W A + + + R+ +L A S E A + Sbjct: 759 LKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQEC-----RRSGILWAASAEMAPRAQ 813 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A DA+++ + ++A + K K KA +++ V P+I + + Sbjct: 814 RKARSFDAVKNSEQDP-FVVAVV--GKFFWQDRKVDKARSWIKRA--VAAAPDIGDFWAV 868 Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKI 334 L +T + R + + E + VSK Sbjct: 869 LYRFEQGHGSTEAIEEVVERCKAAEPKHGEQWIRVSKA 906 >gi|261343662|ref|ZP_05971307.1| tetratricopeptide repeat protein [Providencia rustigianii DSM 4541] gi|282568045|gb|EFB73580.1| tetratricopeptide repeat protein [Providencia rustigianii DSM 4541] Length = 390 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 43/337 (12%), Positives = 103/337 (30%), Gaps = 55/337 (16%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S +F L + + Y+ A + + Sbjct: 84 GEVERAIRIHQSLVESAALSFEQRLLATQQLGRDYMTAGVYDRAENMFQQLTDEVD---- 139 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + +S ++++ Y L +W +AI + Sbjct: 140 -----FKQS-------------------------ALQSLLTIYQLTSDWGKAIETATKLV 169 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K E R + A + + D+ + + ++ N SI + I Q Sbjct: 170 KLGAEELREQIAHFYCELATQELASDDIDGALSLLNKGEQVDKNCARISIMKGRIFIEQA 229 Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 KA L++++ P + Y H + + E N ++ + Sbjct: 230 NYEKAINALKQVYSQDRELVSETLPLLYECYQHTGHSDDWE--AYLRQCVEGNSGAI-AE 286 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL-AQIEQANSHNTDKILYWTQSAL 386 + ++ I +E + + A + ++ P + + L+ + +A + L + + Sbjct: 287 LYLADIIVEKQNHEAAVSYINDQIQRHPTMRLFYRLMDYHLAEAEEGRAKESLILLRKMV 346 Query: 387 -HAMP-DPLWIS-DDGYLSSV--WLPLSPISKTLCYF 418 + P + G+ S W P ++ Sbjct: 347 GEQIRTKPDYRCLKCGFTSRALYWH--CPSCRSWDTI 381 >gi|320182592|gb|EFW57482.1| Cellulose synthase operon protein C [Shigella boydii ATCC 9905] Length = 1111 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 306 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 363 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 364 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 423 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 424 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 483 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 484 EQVYAYGLYLSGHNQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 540 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 541 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARTAYQNVLTR-EPTNADAI 594 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 595 LGLTEVDIAAGDKAAARSQLAKLPATDNTSLNTQRRVALAQAQLGDTAAAQQ 646 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 538 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARTAYQNVLTREPTNADAILGL 597 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 598 TEVDIAAGDKAAARSQLAKLPATDNTSLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 657 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 658 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 692 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 211 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 265 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 266 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 325 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 326 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 369 >gi|253995536|ref|YP_003047600.1| HemY domain-containing protein [Methylotenera mobilis JLW8] gi|253982215|gb|ACT47073.1| HemY domain protein [Methylotenera mobilis JLW8] Length = 140 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 1/127 (0%) Query: 3 RLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVS 62 R + F + +I + S+ V I + S L + +F Sbjct: 5 RFFWWAFTLLAIIFIVWLASNNQGYVLIIRSPYRIQISFNFFLVVFVLSVFGLHHCLRFL 64 Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYL 121 RF PA+ G AL G+ ++AA + A + + E L Sbjct: 65 RFLRHLPAIRRSKKEALRLKAGNTALLEGMHALAAGDFESAEASAKLAQELIQNSDLETL 124 Query: 122 VYLLEVQ 128 + L + Sbjct: 125 IQKLTAE 131 >gi|198434517|ref|XP_002131769.1| PREDICTED: similar to O-linked N-acetylglucosamine transferase [Ciona intestinalis] Length = 1042 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 101/300 (33%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLV 122 L H H GY L L + A ++ A + Q + L Sbjct: 113 EALDHYRHAVRLKPDFIDGYINLAAAL--VTAGDLEGAVHAYFSALQINPELYCVRSDLG 170 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 171 NLLKA-----LGRLEEAKACYLKAIETQTNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVK 225 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 226 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NHAVVHGNLACVYYEQGLV 281 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + K AE K ++ P H + N + Sbjct: 282 DLAIDTYKRAIELQPHFPDAYCNLANALKEKGKVGDAEECYNKALRLCPTHADSLNNLAN 341 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E + ++ A+ L E + ++ + + G + +A A++I+P Sbjct: 342 IKREQGL--IEEAIALYSKALEVFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRISPT 399 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 60/216 (27%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A E L++ T ++ +L G + A +KAL++ P+ Sbjct: 306 ANALKEKGKVGDAEECYNKALRLCPTHADSLNNLANIKREQGLIEEAIALYSKALEVFPE 365 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 366 FAAAHSNLASVLQQQGKLQEALLHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAI 421 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A A K+ P+ + Y +L Sbjct: 422 QCYTRAIQINPAFADAHSNLASVHKDSGSIPAAIQSYRTALKLK--PDFPDAYCNLAHCL 479 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 480 QIICDWSDYDERMKKLVSIVSDQLSKNRLPSVHPHH 515 >gi|148252588|ref|YP_001237173.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1] gi|146404761|gb|ABQ33267.1| putative TPR repeat containing protein [Bradyrhizobium sp. BTAi1] Length = 800 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 91/273 (33%), Gaps = 17/273 (6%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQI-- 149 + A L + S + L+ L + A L ML+ Sbjct: 523 AALAGQNKLEASVASLEEAHAAAPDAVRPATLLVAA--YLRSGRPEKAEALLTDMLKRRP 580 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + + + G + A+ + + P ++ + Y K ++ A + Sbjct: 581 DESALLLLMGQTQSAK--GRTDEAKTIFKRVITQQPKNEAAYRSLSELYANEKSFNEAAS 638 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + K + R ++++ + +GD + LK N+++A A Sbjct: 639 ILKEGLKENPDNLNLR----LSQASLSLARGDNDGAIAAYEAVLKDDPNALLAVNNLASL 694 Query: 270 LISQNKKR----KAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 L+ + + +A + E++ + P + + + NT +K + Sbjct: 695 LLDERTDKASLDRAVQLAERLKSSDLPQFQDTYAWAQVKRGNTAEAVKLLESVIARVPSF 754 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + +++ L MG QA+ + LA+ P Sbjct: 755 SAARYHLAQGYLAMGRAAQANEQLKLALGAEPD 787 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 78/200 (39%), Gaps = 11/200 (5%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 DL A+ +++ +P + + +A+ Q + K W+ A+ + + + Sbjct: 462 DLAQAETVLLESIARNPRSLPLLQALAQVRIARKNWTGALAVADVIRGAEDSAGIADQV- 520 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKIW 287 R+ A + + AS E+ +++ A++ A + + + KAE +L + Sbjct: 521 ---RAAALAGQNKLEASVASLEEAHAAAPDAVRPATLLVA-AYLRSGRPEKAEALLTDML 576 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQ 343 K P E A + +++ G+ A + + ++ + +S++ S ++ Sbjct: 577 KRRPD-ESALLLLMGQTQSAKGRTDEAKTIFKRVITQQPKNEAAYRSLSELYANEKSFNE 635 Query: 344 AHAKAMLAMKIAPRKEIFLL 363 A + +K P L Sbjct: 636 AASILKEGLKENPDNLNLRL 655 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 104/313 (33%), Gaps = 26/313 (8%) Query: 81 YDKG---YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 DKG Y AL ++ A ++ A + + + + L+ L Q+A + Sbjct: 137 EDKGRADYHALRAAVL-FKAGDLAGAVRDAEQTIRLEPGNFDALMVLASAQVAR--GDVD 193 Query: 138 IAHEKLEMM--LQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + + + TR A+ ++Y + + + + P E + Sbjct: 194 AALQMISQLPSASQDDTRVLALKVAIYGRKRDLVQTEATLK------KLVDSKPEFREQL 247 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 V YV + A L ++ L+ + A+ +K Sbjct: 248 VNLYVEQRRLDEAEKELRTAAADSSADVATNLRLVRFLASFR----SPAAAQEQLESRIK 303 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEIAN----IYTHLLSENTVG 309 + + A Q +A +LE + K P +A ++ NT Sbjct: 304 AGGDVFPYQMSLADLDYLQGNLDQATSLLESVVKTAAPDRALAAKNRLAQVYIRRGNTEM 363 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQI 367 K + E ++ + +L + + + L+ G +D A A A+ P+ LL+ A Sbjct: 364 ANKLVSEVLEKDRRNTGALKLRAAMRLDAGQVDGAIADLREALNNEPKSPELLLMFGAAF 423 Query: 368 EQANSHNTDKILY 380 E++ Y Sbjct: 424 ERSGKAELAARQY 436 >gi|320105829|ref|YP_004181419.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis SP1PR4] gi|319924350|gb|ADV81425.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus saanensis SP1PR4] Length = 764 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 103/312 (33%), Gaps = 20/312 (6%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146 L TG +++A A V + + L +A+ + A ++ + + Sbjct: 108 LDTGNLALAGGQPDAAEVQAKAVLAAQPNNADAYAML--ANVAIRKGDTPTALTQIGKAL 165 Query: 147 LQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 P A Y ++ L +Q KA+ + P + + + Sbjct: 166 AIDPNRAAFHATYG-MLQTLNPATLAQSQGELAKAVQLDPSNAGAHLGLAAILEKKGDVA 224 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A LN +A N + L A + + D+ A A E L S S Sbjct: 225 GAEQQLNAAV-SADPKNLQARVSLAALYMRSKDQPKAEAVLRKATEDLS---ESTQGSDL 280 Query: 266 AAKSLISQNKKRKAEVILEKIWK--VNPHPE---IANIYTHLL--SENTVGKLKRALRLE 318 QN+ +A E + HP + +Y H+L + + L Sbjct: 281 LRSYYAQQNQMDRA----ETAYADLTAKHPGSVPLKLVYAHILVGRGKIAQATEVSKELT 336 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + + +V+ + + L G +D+A++ A+K +P L A + + Sbjct: 337 KSKPKDPQVVVLNAMLMLNAGKVDEANSALQEALKDSPDNPTVRLWAGMTARAKGDIPAA 396 Query: 379 LYWTQSALHAMP 390 Q L A P Sbjct: 397 QQDFQQVLQAEP 408 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 43/343 (12%), Positives = 92/343 (26%), Gaps = 56/343 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 ++ + A + A + + V L A A+ A + + +LQ Sbjct: 350 AMLMLNAGKVDEAN--SALQEALKDSPDNPTVRLWAGMTARAKGDIPAAQQDFQQVLQAE 407 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATK------------------------------- 179 A L + GD ++ A Sbjct: 408 PANFGAQKGLAEIASSKGDFTLLRQIAESTIARYGNLPDGYLWRGTAEANEHDLDKAAAD 467 Query: 180 ---ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 AL P+ + Q + L Q ++ L + +L+ Sbjct: 468 FQMALTKDPNNSAGLFELAQIRIAQHRVDDGRKLLEQAVSSSANAQ----ALHLLTALDM 523 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 K + + + S +SQ+ A +K ++NP A Sbjct: 524 QAK-QPDKALARIQQLIGRFPQSGALYDELGAVQLSQHNGAGAIASAQKAMELNPSDAQA 582 Query: 297 -NIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 IY +L+ N + + + + + + ++ + G +A ++ Sbjct: 583 VKIYTQAQILTGNVGPAIAKWEQWIGAHPKDPQGYAVLGLLEESAGDPTKAMEYYKKTLE 642 Query: 354 IAPRKEIFL-----LLAQIEQANSHNTDKILYWTQSALHAMPD 391 + P++ L+A E + + A A Sbjct: 643 LQPQQPAASNNLAYLMA--EHGQNLDVA-----LTLAQTARRG 678 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 62/210 (29%), Gaps = 13/210 (6%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 ALY L ++ A + S ++ + Q + A K E Sbjct: 547 ALYDELGAVQLSQHNGAGAIASAQKAMELNPSDAQAVKIYTQAQILTGNVGPAIAKWEQW 606 Query: 147 L----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + + P L E GD A Y K L++ P P + + Sbjct: 607 IGAHPKDPQGYAVL--GLLEE--SAGDPTKAMEYYKKTLELQPQQPAASNNLAYLMAEHG 662 Query: 203 E-WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A+T ++ L KG ++ ++ KL N+ Sbjct: 663 QNLDVALTLAQTARRGLPNSASTDDTL----GWVYFRKGQYDSARSYLEDAAKLDPNNAS 718 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + N+K A+V L K + P Sbjct: 719 IHYHLGMTYSRLNRKPDAQVHLNKAITLAP 748 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 13/256 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 LA+ + +L I + A ++L + A S Sbjct: 187 ATLAQSQGELAKAVQLDPSNAGAHLGLAAILEKKGDVAGAEQQLNAAVSADPKNLQARVS 246 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKK 216 L R D A+ KA + ++ ++ + Y + RA T L K Sbjct: 247 LAALYMRSKDQPKAEAVLRKATEDLSESTQGSDLLRSYYAQQNQMDRAETAYADLTAKHP 306 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A +L+ R G + + + E K + A +++ K Sbjct: 307 GSVPLKLVYAHILVGR-------GKIAQATEVSKELTKSKPKDPQVVVLNAMLMLNAGKV 359 Query: 277 RKAEVILEKIWK---VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 +A L++ K NP + T + + ++ + + + +++ Sbjct: 360 DEANSALQEALKDSPDNPTVRLWAGMTARAKGDIPAAQQDFQQVLQAEPANFGAQKGLAE 419 Query: 334 IALEMGSIDQAHAKAM 349 IA G A Sbjct: 420 IASSKGDFTLLRQIAE 435 >gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424] gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424] Length = 632 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 79/233 (33%), Gaps = 11/233 (4%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A E + A +++I A L G L A A++I+P+ Sbjct: 35 AAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINPNYA 94 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 V + + AI N + + A + +++G + + Sbjct: 95 EVYNNLGVALYYQGKLEEAIAAYNTAIEINPNY----AEVYSNLGFALSNQGKLEEAIAA 150 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303 +++++ N A I +L +Q K +A K ++N P A +Y++L Sbjct: 151 YNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEIN--PNYAEVYSNLGFALYN 208 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + EIN + + G +++A A A++I P Sbjct: 209 QGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINP 261 >gi|332839885|ref|XP_003313873.1| PREDICTED: transmembrane and TPR repeat-containing protein 1 isoform 1 [Pan troglodytes] Length = 774 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 382 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 438 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 439 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 498 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 499 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 558 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 559 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 614 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 615 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 673 Query: 389 MPDP 392 DP Sbjct: 674 PKDP 677 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 515 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 572 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 573 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 630 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 631 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 684 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 685 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 720 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 721 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 762 >gi|294649575|ref|ZP_06726995.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292824562|gb|EFF83345.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 518 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 61/167 (36%), Gaps = 2/167 (1%) Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R+ + + R+L+ + D+ A+ A ++ + A + + ++ A Sbjct: 51 RSNSTTIKQRALDIALEYDDLQAALDIATHWVEQEPKDVPALFYLSHIALKTHEYELAAK 110 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340 L+KI ++P ++ I + E + L K + L +++ + + G Sbjct: 111 TLDKILNIDPTADLEQILAGIAPEQAEDREILLNALRASKEKNNPSILALIAGLEAQDGL 170 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 +QA A++ + F+L+ + + W A Sbjct: 171 YEQALKNINRALRKRSKSTSFILMKANLLMALKDQEATQKWLARASR 217 >gi|226330227|ref|ZP_03805745.1| hypothetical protein PROPEN_04140 [Proteus penneri ATCC 35198] gi|225201022|gb|EEG83376.1| hypothetical protein PROPEN_04140 [Proteus penneri ATCC 35198] Length = 389 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 42/340 (12%), Positives = 106/340 (31%), Gaps = 63/340 (18%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S +F L + +A Y+ A + ++ R+ Sbjct: 83 GEVERAIRIHQSLMESAALSFDQRLLAVQQLGRDYVAAGVYDRAENMFQQLIDEQEFRQS 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ ++++ Y L +W +AI + Sbjct: 143 AL----------------------------------QSLLAIYQLTSDWGKAIETAEKLV 168 Query: 216 KNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K + E + +L+ ++ ++ + ++ ++ SI + I+++ Sbjct: 169 KLGQHELKEQISHFYCELALQEMSSDNLDSALNLLQKAGQMDPFCARVSIMYGRIYIARD 228 Query: 275 KKRKA----EVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 K+KA ++E K P + + + + R +S Sbjct: 229 DKQKAIDVLMKVIEQDKEMVSETLPMLFECF-QAQGDTS-----RWEAYLRQCVDSNCGA 282 Query: 329 VIVSKIA--LEMGS-IDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQANSHNTDKILY 380 + +A +E I+ A ++ P + + L+ A+ E+ + + +L Sbjct: 283 IAELYLADIIEAKEGIEAAQLYINRQLERHPTMRLFYRLMRYHLAEAEEGRAKESLILLR 342 Query: 381 WTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCY 417 + P + +S W P ++ Sbjct: 343 YMV-GEQIRTKPDYRCHKCGFTSHALYWH--CPSCRSWDT 379 >gi|268317299|ref|YP_003291018.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262334833|gb|ACY48630.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] Length = 404 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 77/244 (31%), Gaps = 17/244 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A L++ +T A L R G A R+A +A+ ++P Sbjct: 149 AYEQLARDDSARAAYAQALRLDSTYAEAHAGLSRLLERAGRYEEALRHAEQAMTLAPARL 208 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKN-----AKEWNRNRAILLIAR---SLENADKG 240 V V ++ AI L ++ +N RA++ R + Sbjct: 209 DYRYRVGALLVQLGRFAEAIPLLQTVVQHWPGHDGAAYNLGRALIATGRTEAGQRYLARA 268 Query: 241 DMIASYHD----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + + A +L + A A+ L+ +A L+ + P +A Sbjct: 269 DSLQQLTERLLHARRRTELQPDDPDAWSAYARLLMEAGYLDQAYTALQTALTLAPG-NLA 327 Query: 297 ----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L +T G LK L + E + + +G A + Sbjct: 328 LLSNLATLQLAMGDTTGALKGLQLLVRADSSFAEGWFNLGVVYAMLGDTGAAREAWQRTL 387 Query: 353 KIAP 356 ++ P Sbjct: 388 RLNP 391 >gi|254283903|ref|ZP_04958871.1| sulfotransferase [gamma proteobacterium NOR51-B] gi|219680106|gb|EED36455.1| sulfotransferase [gamma proteobacterium NOR51-B] Length = 668 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 35/258 (13%) Query: 146 MLQIPAT-------REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 M P R A+ +L R GD + A+ L P P Sbjct: 1 MTTDPIAAMDSESERLAAIQNL----LRAGDRDKARNAVKAWLSDQPKHPEALYFYAVIQ 56 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + A+ L + K E +R + + R + G S + ++ Sbjct: 57 RTDGQPDSAMQTLAELLKIQPEHSRAVQELGHCQRQM-----GATALSLKYYQRATRMNA 111 Query: 258 NSIMA---SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I + + A + L +N + ++ + + P P +A + + + KR Sbjct: 112 SLIASWQGQLHALQKLGQRNGLNQIAEQIDYL-RALPPPLLAVM-------DLQARGKRL 163 Query: 315 ------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367 R + N +E + +++ IALEMG++D+A A KIAP + + L Q+ Sbjct: 164 QAEELCKRFMQKNPRHIEGMRLLAGIALEMGALDEAALLLTTAEKIAPANQRVQLDCVQL 223 Query: 368 EQANSHNTDKILYWTQSA 385 + +++ + + A Sbjct: 224 ARRQNNHDEARRRANKLA 241 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 93/279 (33%), Gaps = 18/279 (6%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L +Q L + A ++ L A+Y G +SA + + L Sbjct: 15 RLAAIQNLLRAGDRDKARNAVKAWLSDQPKHPEALYFYAVIQRTDGQPDSAMQTLAELLK 74 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA--RSLENADKG 240 I P+ + + + + + A++ K + R A L+ + L K Sbjct: 75 IQPEHSRAVQEL--GHCQRQMGATALS-----LKYYQRATRMNASLIASWQGQLHALQKL 127 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H----PEI 295 + E + + A L ++ K+ +AE + ++ + NP H + Sbjct: 128 GQRNGLNQIAEQIDYLRALPPP-LLAVMDLQARGKRLQAEELCKRFMQKNPRHIEGMRLL 186 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 A I + + + L E+I + + ++A + D+A +A Sbjct: 187 AGIALEMGALDEAALL--LTTAEKIAPANQRVQLDCVQLARRQNNHDEARRRANKLANSD 244 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393 P F LA IE + + L + L DP Sbjct: 245 PENLQFQSLAAIEALQVSDFEAALAGFERILEKQPNDPA 283 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 15/168 (8%) Query: 124 LLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL V A + A E + M + P + L + +G L+ A T A Sbjct: 150 LLAVMDLQARGKRLQAEELCKRFMQKNPR-HIEGMRLLAGIALEMGALDEAALLLTTAEK 208 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 I+P V VQ A N K N+ N L +L+ +D Sbjct: 209 IAPANQRVQLDCVQLARRQNNHDEARRRAN-KLANSDPENLQFQSLAAIEALQVSDFEAA 267 Query: 243 IASYHDAIESLKLCDNSIMASICA--------AKSLISQNKKRKAEVI 282 +A + +E A++ + ++ + N+ RKA + Sbjct: 268 LAGFERILEKQPND----PATLTSLGHTLKTIGRAEEAINRYRKATAV 311 >gi|94263967|ref|ZP_01287769.1| TPR repeat [delta proteobacterium MLMS-1] gi|93455639|gb|EAT05821.1| TPR repeat [delta proteobacterium MLMS-1] Length = 847 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 96/320 (30%), Gaps = 49/320 (15%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY 158 A ++++ Q L++ L + A +L P E + Sbjct: 132 GRAAGALNAFKRAQPLQTAAEWSALVDA--LLLSGSLHEAERIHRQLLAADPENSELQMR 189 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + +A+ K L PD V A+ A S + + Sbjct: 190 -LAAIFSSRQQIFAAEHIYRKLLAGQPDNEEVAAALQNLKKSAGRESEPSEAATEGRVER 248 Query: 219 K----------EWNRNRAIL--------LIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + E +A L L + + +GD+ + ++L L Sbjct: 249 EGREEMGGQQVELPPQQAALKPGEQARDLTGLAEKMVRRGDLAGAEKTTRQALALEPRFT 308 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 AS A L+++ + A+ +L ++ + ++T +L RA RL Sbjct: 309 PASFLLADILLTRGEFAAADQVLI---------QLIEEF----PDSTRARLTRA-RLAGW 354 Query: 321 NKESVESLVIVSKIALEMG-------SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 +K+ S + + L + A ++ ++ LL + + Sbjct: 355 SKDYPRS--LAAYDQLIAQYPDDPIFQWEAARVAFWAKREVEAQERYQRLL--VPSVDQS 410 Query: 374 NTDKILYWTQSALHAMPDPL 393 ++ W P P Sbjct: 411 P--RVRVWLAGETDLEPKPA 428 >gi|326912317|ref|XP_003202500.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Meleagris gallopavo] Length = 794 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 82/270 (30%), Gaps = 19/270 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LQ+ A+++L G A ++ D Sbjct: 438 LTKDVVEAKDYYRRALQLNPQHNRALFNLGNLLKSQGKKEEAVILLRDSIKYGSDFADAY 497 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + A +N E + L + D G + + Sbjct: 498 SSLASLLAEQERLKEAEEVYKAGIENCPESSD----LHNNYGVFLVDTGAPERAVSHYRQ 553 Query: 252 SLKLCDNSIMASICAAKSLISQNKKR-------KAEVILEKIWKVNPHPEIANIYTHLLS 304 ++ L +A + + S + + +A + K ++P + +Y + Sbjct: 554 AIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVSRKAEILSP---LGALYYNTGR 610 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLL 363 ++ R L + + E+ + ++++ MG +A + E + L Sbjct: 611 YEEALQVYREAAL--LQPSNKETRLALAQVLAMMGRTKEAEKMTNHILDEDVECLECYRL 668 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L+ I H K L AL DP Sbjct: 669 LSAIYSKQEH-YAKALEAIDKALQLKPKDP 697 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 14/165 (8%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L LL Q + A E + ++ ++ Y ++ G A + Sbjct: 499 SLASLLAEQ-----ERLKEAEEVYKAGIENCPESSDLHNNYGVFL--VDTGAPERAVSHY 551 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ +SP + + + + A + + K + +A +L Sbjct: 552 RQAIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVS-----RKAEILSPLGALYY 606 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + G + E+ L ++ + A+ L + ++AE + Sbjct: 607 NTGRYEEALQVYREAALLQPSNKETRLALAQVLAMMGRTKEAEKM 651 >gi|302697995|ref|XP_003038676.1| hypothetical protein SCHCODRAFT_64572 [Schizophyllum commune H4-8] gi|300112373|gb|EFJ03774.1| hypothetical protein SCHCODRAFT_64572 [Schizophyllum commune H4-8] Length = 920 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 105/330 (31%), Gaps = 51/330 (15%) Query: 99 NIPLARKMHSYVSQQHT--FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PA 151 + AR + L ++ A E + + + E L+ +L P Sbjct: 529 DGAEARGRVGTARAILAYALKVYPNIKDLWIRAAELE-KAHGSRESLDDILSRAVEHCPQ 587 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 T + E GD+ +A+ +A +P++ + A V+ E A L Sbjct: 588 TEVLWLMG-AKEKWLAGDVPAAREVLERAFIANPESEQIWLAAVKLEAENGELDVAKQLL 646 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI----------- 260 + + A + R D A+ ++LK Sbjct: 647 IRARDVAGTQRIWMKSAVFERQQGQLD-----AALETVSQALKKFPKFAKLYMIQGQIHA 701 Query: 261 -----MAS------------------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 A+ I A++ + NK KA +LEK VNP + Sbjct: 702 SQRRYPAARQAYAAGLKAVPKEPTLWILASRLEEADNKSIKARALLEKARMVNPGVDTLW 761 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G + L +E S ++ S +A+ + Q A+++ A+K Sbjct: 762 AEAVGVEERAGGAGQAKAMLARALQECPSSGLLWS-MAIWAEARPQRKARSVDAVKKTND 820 Query: 358 KE-IFLLLAQIEQANSHNTDKILYWTQSAL 386 + +A++ + +K W A+ Sbjct: 821 DSLVLCAIARLFWSERK-VEKAREWFGRAV 849 >gi|293372352|ref|ZP_06618737.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|298480252|ref|ZP_06998450.1| TPR-domain containing protein [Bacteroides sp. D22] gi|292632794|gb|EFF51387.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|298273533|gb|EFI15096.1| TPR-domain containing protein [Bacteroides sp. D22] Length = 320 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 85/231 (36%), Gaps = 10/231 (4%) Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + + A + E + L ++G+ A+ K + P Sbjct: 38 AQRMGRPDYAVKCFTEALAIQEEFETMGY--LSQLYIQMGETAKARELLEKMAAMEPHLT 95 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + +++ +A+ K +E N A+ + D + + Sbjct: 96 STFLTLANVCFIQEDY-QAMEEAANKAIAIEEGN---AVAHYLLGKARKGQNDDLMTIAH 151 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT- 307 +++ L D+ I A + A++L++ + ++ ++ + NP E A + + E+ Sbjct: 152 LTKAITLKDDFIEARLLRAEALLNLKQYKEMMEDIDAVLAQNPEEETAMLLRGKVKESNG 211 Query: 308 --VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + EIN + ++ + + ++ + + +A A+++ P Sbjct: 212 QGEEAEEDYKLVTEINPFNEQAYLYLGQLYINQKKLTEAIGLFDEAIELNP 262 >gi|209522682|ref|ZP_03271240.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209496731|gb|EDZ97028.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 1103 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 36/273 (13%), Positives = 85/273 (31%), Gaps = 28/273 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 I A + ++ + H E L + L Q N A + ++I Sbjct: 346 GKISSAIRAYNQALEIHPDFAEVHANL--ATMYLQNGQVNEAIAAYQKSIEIKPDLAAVH 403 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQK 214 ++L ++G+ +A AL++ PD + + E+ AI + Sbjct: 404 WNLGRVYQQLGNTEAAINSWKIALELKPDLVEA-DFHFELGNILARRGEYEPAIASYQRA 462 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 W A + R + + + +++ L + A+ Sbjct: 463 ISRKPNWAEPYANIGCLR----VQQDRLKEALDQLQKAIALSPKMPELYLHTARIFTKLR 518 Query: 275 KKRKA----EVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESV 325 + + A + ++E P + Y +L + + + ++ E Sbjct: 519 RHQDAINHYQKVIEL------QPNFPDAYANLANMQAILGQLPEAIANYQKTLQLKPEWA 572 Query: 326 ESLVIVSKIALEMGSID-QAHAKAMLAMKIAPR 357 E ++ ++ +A A A+++ P Sbjct: 573 EVYCRLA--HIQKQKEPKEAVANLEKALELKPD 603 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 95/267 (35%), Gaps = 50/267 (18%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G ++SA R +AL+I PD V + Y+ + + AI + + + A Sbjct: 345 QGKISSAIRAYNQALEIHPDFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDL----A 400 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-------SICAAKSLIS------- 272 + G+ A+ + +L+L + + A +I A + Sbjct: 401 AVHWNLGRVYQQLGNTEAAINSWKIALELKPDLVEADFHFELGNILARRGEYEPAIASYQ 460 Query: 273 ----------------------QNKKRKAEVILEKIWKVNPH-PEI----ANIYTHLLSE 305 Q++ ++A L+K ++P PE+ A I+T L Sbjct: 461 RAISRKPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSPKMPELYLHTARIFTKLRRH 520 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364 + ++ E+ ++ ++ + +G + +A A +++ P E++ L Sbjct: 521 --QDAINHYQKVIELQPNFPDAYANLANMQAILGQLPEAIANYQKTLQLKPEWAEVYCRL 578 Query: 365 AQIEQANSHNTDKILYWTQSALHAMPD 391 A I++ + AL PD Sbjct: 579 AHIQKQKEPKEAVAN--LEKALELKPD 603 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 16/237 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A + + E + L VQ + + + + + ++P Sbjct: 450 GEYEPAIASYQRAISRKPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSPKMPELYLH 509 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ + R D A + K +++ P+ P + + + AI + Sbjct: 510 TAR-IFTKLRRHQD---AINHYQKVIELQPNFPDAYANLANMQAILGQLPEAIANYQKTL 565 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + EW L + + + + ++L+L + A L Sbjct: 566 QLKPEWAEVYCRLA-----HIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 620 Query: 276 KRKAEVILEKIWKV--NPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 KA + ++ W+ P IA I+++ S L + LE I S+E+ Sbjct: 621 LGKARKVADRYWENCGKTLPVLCAIAYIFSYTQSGACEQALAKLEHLETICNNSMET 677 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 12/193 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R G+ A +A+ P+ + V A+ L + + Sbjct: 448 RRGEYEPAIASYQRAISRKPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSP--KMPE 505 Query: 226 AILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L AR + D I Y IE L N A A + +A + Sbjct: 506 LYLHTARIFTKLRRHQDAINHYQKVIE---LQPNFPDAYANLANMQAILGQLPEAIANYQ 562 Query: 285 KIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K ++ PE A +Y L + + + E+ + E+ + + + Sbjct: 563 KTLQLK--PEWAEVYCRLAHIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 620 Query: 341 IDQAHAKAMLAMK 353 + +A A + Sbjct: 621 LGKARKVADRYWE 633 >gi|237799804|ref|ZP_04588265.1| hypothetical protein POR16_13290 [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806349|ref|ZP_04593053.1| hypothetical protein POR16_37819 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022659|gb|EGI02716.1| hypothetical protein POR16_13290 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027462|gb|EGI07517.1| hypothetical protein POR16_37819 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 654 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 77/273 (28%), Gaps = 42/273 (15%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A + L L Q + + A + Sbjct: 150 DAQTAIRETEQA----LGPQPALTRRL--QAIQEQVAVDKAARGYK-------------- 189 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + GD +A A A+ P + +V + ++ A + + Sbjct: 190 -----ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALMAQGQYEEARSAATEALA-- 242 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 N N A LL R GD + D ++ L ++ A + + R+ Sbjct: 243 --LNGNDATLLAQRGQLRQRLGDQNGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPRE 297 Query: 279 AEVILEKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESL 328 A L++ P E+ Y + + + KR R + ++ + Sbjct: 298 ALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQAGLKPREVQDAAYTA 357 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + S+ A + + P +++F Sbjct: 358 MRTSEDAQAIAWFKRVLDYQRAGDLQMPAQQVF 390 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 25/210 (11%) Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 L L G ++A + A + +F + L V Sbjct: 167 ALTRRLQAIQEQVAVDKAARGYKALARGDNETA--VSEARDAVRSFPKQMAYRKLLVSAL 224 Query: 131 LAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 +A+ QY A + AT A + R+GD N A++ +AL + + Sbjct: 225 MAQGQYEEARSAATEALALNGNDAT-LLAQRGQLRQ--RLGDQNGARQDFAQALAVG-NL 280 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SLENADK 239 P +A + Y + A+ L Q + + A L +L+ + Sbjct: 281 PLREQASL--YAAMGQPREALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKR 338 Query: 240 GD------MIASYHDAIESLKLCDNSIMAS 263 D A +++ +++ + Sbjct: 339 VDRQAGLKPREVQDAAYTAMRTSEDAQAIA 368 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 108/330 (32%), Gaps = 39/330 (11%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--- 137 + A L+++A + K Q+ YL Q A + Sbjct: 62 RQRADAAQLRDLIALAERD-----KYRRDHPQRFPKARPKPGYLEGNQALRAYTNRDYED 116 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESC----RIGDLNSAQRYATKALDISPDAPWVTEA 193 A + Q P + + E+ R+ D +A R +AL P +A Sbjct: 117 SARHARNAIAQAP--KNLDYRMMLIEALQLQQRLDDAQTAIRETEQALGPQPALTRRLQA 174 Query: 194 VVQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL---ENADKGDMIASY 246 + +Q + A A++ R+ + R L +G + Sbjct: 175 IQEQVAVDKAARGYKALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALMAQGQYEEAR 234 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVN--PHPEIANIYTHL 302 A E+L L N A++ A + + Q + A + V P E A++Y + Sbjct: 235 SAATEALALNGN--DATLLAQRGQLRQRLGDQNGARQDFAQALAVGNLPLREQASLYAAM 292 Query: 303 -LSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-- 358 + +L++A E+ + V+ +S+ + G++D + + PR+ Sbjct: 293 GQPREALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGALDT-FKRVDRQAGLKPREVQ 351 Query: 359 -EIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + + + + W + L Sbjct: 352 DAAYTAM------RTSEDAQAIAWFKRVLD 375 >gi|308048523|ref|YP_003912089.1| doubled CXXCH domain protein [Ferrimonas balearica DSM 9799] gi|307630713|gb|ADN75015.1| doubled CXXCH domain protein [Ferrimonas balearica DSM 9799] Length = 760 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 92/292 (31%), Gaps = 14/292 (4%) Query: 38 RTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA 97 + V S + + + LS P+ L + + A+ T + Sbjct: 467 QQPAIVRASAVAALIDYGAPALSTLDAALSDPSALVRASAIPVFAQAPDAVRTARLIPLL 526 Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + LA + L L + Q + L+ + Q Sbjct: 527 DDPTLAVR----DEAVKALAGVPLAQLGQAQA----GYQAALEDYLQRLEQNAD--LPGN 576 Query: 158 Y-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L RIG A + AL++ P +V E + L+Q Sbjct: 577 RLNLAVVLTRIGQPQQAVAHYRAALEMDPRFLPARLNLVTLLSQMGETAEVSGLLDQGLA 636 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + +RA L ++L A+ G + A+ +LK + A +K Sbjct: 637 LSDVADADRAQLGYLKALALAESGQIEAALVWLDRTLKWQPTHLRGHYNRALIQDRLGRK 696 Query: 277 RKAEVILEKIWKVNPH-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESV 325 +A L++ + P P++ A++Y + N L L ++ + Sbjct: 697 EEALAALQQGLVLAPASPDLLYASVYLNATLGNLPQALSDLATLRQLRPDDP 748 >gi|260788069|ref|XP_002589073.1| hypothetical protein BRAFLDRAFT_120892 [Branchiostoma floridae] gi|229274247|gb|EEN45084.1| hypothetical protein BRAFLDRAFT_120892 [Branchiostoma floridae] Length = 945 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 55/306 (17%), Positives = 107/306 (34%), Gaps = 45/306 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E+LE +LQ P + GD+ +A++ + A Sbjct: 583 RAAYFEKNH-GTREQLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARKILSLAFQ 640 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-------NRAILLIARSLE 235 +P++ + A V+ E RA L + + +A + ++ + Sbjct: 641 ANPNSEEIWLAAVKLESENNEDERARRLLAKARASAPTARVFMKSVKLEWVLKETEKAKD 700 Query: 236 NAD----------------------KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 D +G A+ + LK C +SI + ++ Sbjct: 701 LIDEGLKHYSDFPKLWMMRGQILEQEGRTDAAREAYNQGLKKCPHSISLWLLLSQLEEKL 760 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRL-EEINKESVESLVIV 331 KA ILEK N P+ A ++ + E + A L +E + + Sbjct: 761 CNITKARAILEKSRLKN--PQCAELWLESVRLEWRASNRQIAQSLMARALQECPTAGRLW 818 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ A+ M + Q K++ A+K + L +A++ + +K W A+ P Sbjct: 819 AE-AIFMEARPQRKTKSVDALKRCEHDAHVLLAVARLFWSERK-VNKSREWFNRAVKIDP 876 Query: 391 DP--LW 394 D W Sbjct: 877 DQGDAW 882 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 75/210 (35%), Gaps = 17/210 (8%) Query: 168 GDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G + A+ AL + P + W A ++ L + A Sbjct: 558 GAIECARAIYAHALTVFPSKKSIWQRAAYFEKN------HGTREQLEALLQRAVAHCPKA 611 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L + + GD+ A+ + + NS + A K N+ +A +L K Sbjct: 612 EVLWLMGAKSKWLAGDVPAARKILSLAFQANPNSEEIWLAAVKLESENNEDERARRLLAK 671 Query: 286 IWKVNPHPEIANIYT-HLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGS 340 P A ++ + E + + ++A L + + + ++ +I + G Sbjct: 672 ARASAPT---ARVFMKSVKLEWVLKETEKAKDLIDEGLKHYSDFPKLWMMRGQILEQEGR 728 Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 D A +K P ++LLL+Q+E+ Sbjct: 729 TDAAREAYNQGLKKCPHSISLWLLLSQLEE 758 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 22/225 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ A+ D +P+ P A + + + A + K + ++ + Sbjct: 294 DVKKARLLLKSVRDTNPNHPPAWIASARLEEVTGKVQAARNII---MKGTEVCQKSEDVW 350 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L A L+ D G ++++ S+ I AA+ + + R + I K + Sbjct: 351 LEAIRLQPTDIG-----RAVVTQAVRQISGSVRLWIKAAEI---EEEMRAKKRIFRKALE 402 Query: 289 VNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P+ + L E+ L RA E +SVE + ++K+ + + A Sbjct: 403 HIPNSVRLWKAAVELEEPEDARIMLSRA---VECCPQSVELWLALAKL----ETYENARK 455 Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A +N + AL ++ Sbjct: 456 VLNKARENIPTDRQIWITAAKLEEAQKNNDNVNRI-VDRALQSLR 499 >gi|156360950|ref|XP_001625285.1| predicted protein [Nematostella vectensis] gi|156212111|gb|EDO33185.1| predicted protein [Nematostella vectensis] Length = 935 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 86/256 (33%), Gaps = 34/256 (13%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224 D+ SA+ A +P++ + A V+ E RA L + + NA Sbjct: 613 ANDIPSARSILALAFQANPNSEEIWLAAVKLESENNEDQRARKLLQRARMNACTARVMMK 672 Query: 225 ------------RAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257 A L+ +++ + ++ + +K C Sbjct: 673 SIKLEWVLGNIPEANKLLDEAVQKYPDFAKLWMMKGQLQEQEKNLPEAREAYKTGVKKCP 732 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALR 316 SI + ++ + KA +LE+ + NP PE+ + E G+ A Sbjct: 733 TSIPLWLLLSRLEEKTGQATKARSVLEQGRQRNPKSPELWLEAVRI--ETRGGRKDFART 790 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNT 375 L + + ++ A+ M Q +++ A+K + L +A++ + Sbjct: 791 LMAKAMQECPTAGVLWSEAIFMEPRPQRKTRSVDALKRCEHDAHVLLAVAKLFWSERK-V 849 Query: 376 DKILYWTQSALHAMPD 391 K W A+ PD Sbjct: 850 SKARDWFNRAVKLDPD 865 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 32/223 (14%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREF 155 NIP A K+ Q L ++ Q+ E+ A E + ++ T Sbjct: 681 GNIPEANKLLDEAVQ----KYPDFAKLWMMKGQLQEQEKNLPEAREAYKTGVKKCPTSIP 736 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 L + G A+ + +P +P + V+ A T + + Sbjct: 737 LWLLLSRLEEKTGQATKARSVLEQGRQRNPKSPELWLEAVRIETRGGRKDFARTLMAKAM 796 Query: 216 KNAKEWNR--------------------------NRAILLIARSLENADKGDMIASYHDA 249 + + A +L+A + + + + Sbjct: 797 QECPTAGVLWSEAIFMEPRPQRKTRSVDALKRCEHDAHVLLAVAKLFWSERKVSKARDWF 856 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++KL + A + + + + E + K +V PH Sbjct: 857 NRAVKLDPDFGDAWAYFYRFELQHGTEAQQESVSHKCVQVEPH 899 >gi|15606587|ref|NP_213967.1| hypothetical protein aq_1402 [Aquifex aeolicus VF5] gi|2983806|gb|AAC07363.1| putative protein [Aquifex aeolicus VF5] Length = 670 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 34/205 (16%) Query: 85 YKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 Y+A L +A N A ++ V + E + L+ + Y+ A+ Sbjct: 222 YRADLTQAGKLLAQGNPEEAIELAKKVLLSDPTNVEAM--LIIGDAYMELGDYSNAYSYY 279 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +M L A+ L + S + A YA + Sbjct: 280 KMALGFDKENLRAIKGLMYASLALKRYEEAYNYARE------------------------ 315 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 L + + R +A+ L ++ + + + +Y E+ KL + Sbjct: 316 -------LGRLGVENGDIERVKALYLAKKAEDFVKRKEYDKAYIYLKEAEKLAPDDPYVL 368 Query: 264 ICAAKSLISQNKKRKAEVILEKIWK 288 + + +A + +K Sbjct: 369 LLLGDIYFGRGDYTQAYKYYVEAYK 393 >gi|172061374|ref|YP_001809026.1| HemY domain-containing protein [Burkholderia ambifaria MC40-6] gi|171993891|gb|ACB64810.1| HemY domain protein [Burkholderia ambifaria MC40-6] Length = 395 Score = 54.6 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 115/409 (28%), Gaps = 45/409 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + ++ + + V V + + S + + + L Sbjct: 3 LRGIVWLAILFGIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVITIVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAARDALAVDAN---- 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 Q A + AH E + + + A+ A Sbjct: 119 -------QGAASLVAATAAHRMHEYTRRDD----------WLSKVDAPEWQDARLLAAAD 161 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + A + + A + ++ K W + E Sbjct: 162 MRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221 Query: 241 DMIASYHDAIESL----KLCDN--------SIM-------ASICAAKSLISQNKKRKAEV 281 + A E+L + + + AA+ L+ ++ +A Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPLERQSPRLADLAAELLVPLERRPEARR 281 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 I+E+ N + Y + + +++A ++ + + + L + ++ + Sbjct: 282 IVEEALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLW 341 Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K A + LA++ + ++ +SAL Sbjct: 342 GKAQSFLEAALKQADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|319945395|ref|ZP_08019656.1| tetratricopeptide repeat protein [Lautropia mirabilis ATCC 51599] gi|319741388|gb|EFV93814.1| tetratricopeptide repeat protein [Lautropia mirabilis ATCC 51599] Length = 634 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 115/306 (37%), Gaps = 41/306 (13%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----Q 148 ++ + LAR+ + + L V+ + Y A + L+ +L + Sbjct: 124 LAAQTGDARLARRATEIAIVTGSLSDALDSARLWVR---LDPTYPNARKALDTLLLANGR 180 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + L ++ + G L++A P + E ++ W+ A Sbjct: 181 VTEVEPALTRQL-TQARQAGTLDTAY-------------PQLQEKLLNLPDRRAAWALA- 225 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 ++ +A + + +A L+ R+ + G A+ +A+ + +L ++I A + + + Sbjct: 226 -----QRLSASDLDNIQARLM--RARLAHEAGQQQAATDEALAAQQLAPDNIEAVLASVQ 278 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKE 323 L S+ R+ +L + + HP+ A + SE + R++ + + Sbjct: 279 LLQSRPGGRQRAAVLLGNY-LQKHPDDLRALKAQGLLQIASEQNDAAIATLSRVQSLEPD 337 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-----IFLLLAQIEQANSHNTDKI 378 + +L ++++ + +A + + E FL L++I Q + + Sbjct: 338 NPATLYTLAQLHHQKHDYARATEALQRYVALPEDIERDNGNAFLFLSEIAQKQN-DQAGA 396 Query: 379 LYWTQS 384 + W + Sbjct: 397 IQWLER 402 >gi|313240003|emb|CBY32363.1| unnamed protein product [Oikopleura dioica] Length = 1054 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 7/226 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E + +Q +T A +L + GD+ A KA+ + Sbjct: 185 GRLEEAEECYQKAIQCNSTFAVAYSNLGCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFIN 244 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ + RA++ + N A++ + ++G + + ++ Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310 +L N A A +L + +AE E+ K++P H + N ++ E T Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ R + + + ++ I + G A A++I P Sbjct: 361 MELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYKQAIRIFP 406 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 47/160 (29%), Gaps = 11/160 (6%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +AL + P+ + A+ + K ++ + Sbjct: 331 EQALKLHPEHADSLNNLANIKREQNRTHEAMELYQRALKAKPDFP----AAHSNLASILQ 386 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 +G + +++++ A + + ++A + +N P A+ Sbjct: 387 QQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYQSAISIN--PNFAD 444 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332 +++L S NT ++ + E+ + Sbjct: 445 AFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARA 484 >gi|313226628|emb|CBY21773.1| unnamed protein product [Oikopleura dioica] Length = 1054 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 7/226 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E + +Q +T A +L + GD+ A KA+ + Sbjct: 185 GRLEEAEECYQKAIQCNSTFAVAYSNLGCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFIN 244 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ + RA++ + N A++ + ++G + + ++ Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310 +L N A A +L + +AE E+ K++P H + N ++ E T Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ R + + + ++ I + G A A++I P Sbjct: 361 MELYQRALKAKPDFPAAHSNLASILQQQGRHHDAIEHYKQAIRIFP 406 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 47/160 (29%), Gaps = 11/160 (6%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +AL + P+ + A+ + K ++ + Sbjct: 331 EQALKLHPEHADSLNNLANIKREQNRTHEAMELYQRALKAKPDFP----AAHSNLASILQ 386 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 +G + +++++ A + + ++A + +N P A+ Sbjct: 387 QQGRHHDAIEHYKQAIRIFPQFADAYSNMGNTYKEMARNQEAIQCYKSAISIN--PNFAD 444 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332 +++L S NT ++ + E+ + Sbjct: 445 AFSNLASLHKDCGNTEEAIQYFDFALRVRPNFPEAFCARA 484 >gi|261197553|ref|XP_002625179.1| DnaJ domain-containing protein [Ajellomyces dermatitidis SLH14081] gi|239595809|gb|EEQ78390.1| DnaJ domain-containing protein [Ajellomyces dermatitidis SLH14081] Length = 762 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 19/186 (10%) Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ + L A + ML+ + G+ A R+ Sbjct: 413 RLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDPDALLIRG--RLFYAQGENEQAIRHF 470 Query: 178 TKALDISPDAPWVT------EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225 AL++ PD+ + +++ A+++ AI + + + Sbjct: 471 KLALNLDPDSTQAVRYLRMVQKLLRMKDEGNAAFKARKYQEAIDVYTKALEVDPKNKDIN 530 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + LL R+ + + + D ++LKL + + A AK+ + +A +K Sbjct: 531 SKLLQNRAQAYLNLSNYDKAIEDCTDALKLDPSYVKAQRVRAKAYGASGNWEEAAREFKK 590 Query: 286 IWKVNP 291 I + NP Sbjct: 591 IAEANP 596 >gi|46362551|gb|AAH66556.1| C20orf14 homolog (H. sapiens) [Danio rerio] Length = 944 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ N E LE +LQ P + GD+ +A+ A Sbjct: 582 RAAYFEKN-NGTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 639 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 640 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVRLEWVLGNIEAAHE 699 Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + + LK C +S+ + ++ Sbjct: 700 LCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLEEKV 759 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP PE+ L + + A L +E S ++ Sbjct: 760 GQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 817 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + P Sbjct: 818 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEP 875 Query: 391 D 391 D Sbjct: 876 D 876 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 22/225 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ A+ + +P P A + + + A + K + ++ + Sbjct: 293 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSEDVW 349 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L A L+ D + + ++++ S+ I AA+ R + +L K + Sbjct: 350 LEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALE 401 Query: 289 -VNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 V+ + L E+ L RA E SVE + ++++ + + A Sbjct: 402 NVSKSVRLWKTAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENARR 454 Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 455 VLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 498 >gi|325295455|ref|YP_004281969.1| hypothetical protein Dester_1275 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065903|gb|ADY73910.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 597 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 106/296 (35%), Gaps = 30/296 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHEKLEMMLQIPA---- 151 N A + ++ + + YLLE A ++ + + + P Sbjct: 77 GNFEKAYRAIREAVKKDPKN---INYLLEAARFTANLKKLEDAEEFAKKALSIDPKNPKA 133 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + A S+ G+ A+RY + L +PD + Y+ K++ A L Sbjct: 134 LKLLAGISIIK-----GNKKEAERYYKRILSTAPDKS-TYIMLANLYINEKKYLEAQKLL 187 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K ++ + I + KG + + + +++KL N A + K + Sbjct: 188 TEALK---KYPSDFLINYFLGEVSFL-KGKINTARNYIEKAIKLNPNFESAYVLLGKIYL 243 Query: 272 SQNKKRKAEVILEKIWKVNPHPE----IANIY-THLLSENTVGKLKRALRLEEINKESVE 326 + +KAE LEK+ N P+ + I+ +L T L RL +++ ++ Sbjct: 244 KEKDYKKAEKFLEKVLDKN--PDNIYALKEIFIIYLKQNKTNEALNVINRLVKLDPYNL- 300 Query: 327 SLVI--VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ V+ EM + K+ P + + S N +K L Sbjct: 301 -RLLSWVAASLFEMKEYKKVIPLIERITKLNPDNPNVYFMLGLAYEMSGNYEKALE 355 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 39/94 (41%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A + L+ +LQI + + Y YF + R +L+ A++ A KAL P+ Sbjct: 442 AYFAEKLGKDKETEGYLKKLLQIEPSPDVYNYLAYFYANRGINLDEAEKLAEKALKAEPE 501 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 P + + ++ A +L + K ++ Sbjct: 502 NPAFLDTLGWVLYKKGDYKNACKYLEKALKLKQD 535 >gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405] gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360] gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20] gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405] gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360] gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20] gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313] Length = 745 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 110/342 (32%), Gaps = 34/342 (9%) Query: 41 PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHK---RNYDKGYKALYTGLMS-IA 96 IL + + + +F + + ++ + YDK +A M+ + Sbjct: 6 LLFILVLGVCLFTSCGNFVKTNIYFSAAESAFDSGKYEDAIKYYDKVIEADSGNAMAYLG 65 Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF 155 A + Y F + + A+ + E+ E L+ E Sbjct: 66 KGLALDA--LGKYEEALEFFDKAIEINKDLAKAYNAKGTTLASLERYEESLENFKKAAEL 123 Query: 156 A----------VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 Y L +G A +YA KAL ++P + + Sbjct: 124 KPKNSAYQNDVAYGL----NNLGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLD 179 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 AI ++ + + + +S+ G + + L++ + + A Sbjct: 180 EAIECYDKAIELSPTYTN----AYYNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITS 235 Query: 266 AAKSLISQNKKRKAEVILEKI---WKVNPHPEIANI---YTHLLSENTVGKLKRALRLEE 319 L K KA + + +P+P + Y +N + + +A++LE Sbjct: 236 KGYCLNELGKYEKAIECFDTAIEKYPKDPYPYVCKATSLYYLGKYDNALEECNKAIKLEY 295 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + S + +KI +E G I++A + IA ++ Sbjct: 296 TFPD---SYIWKAKILVEKGDIEEARKSCDEFLAIAEDASVY 334 >gi|253700327|ref|YP_003021516.1| hypothetical protein GM21_1704 [Geobacter sp. M21] gi|251775177|gb|ACT17758.1| TPR repeat-containing protein [Geobacter sp. M21] Length = 265 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 13/191 (6%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A K ++ + L + ++ A + ++ Sbjct: 55 ADDAIAALKKGLELAPEDLDGITAL-----GDVYFESGKHKDALGCYRKVTELQPKDCDG 109 Query: 157 VY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 L + + D A + KAL++ P + A+ Y E +AI ++ Sbjct: 110 YVSMGLVYNAMERADE--ALKSFQKALELDPKNVFALNAMGDLYYGLGENEKAIEAYHR- 166 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 E + A D D+ ++ H+ +E+++L + M+ + I ++ Sbjct: 167 ---GIEIDPADATARFNLGELYYDMDDLESAEHETLEAVRLDPDFTMSYLTLGNICIDED 223 Query: 275 KKRKAEVILEK 285 + ++A E Sbjct: 224 RTQEAIKYFES 234 >gi|47086729|ref|NP_997820.1| pre-mRNA-processing factor 6 [Danio rerio] gi|34784057|gb|AAH56710.1| C20orf14 homolog (H. sapiens) [Danio rerio] Length = 944 Score = 54.2 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 54/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ N E LE +LQ P + GD+ +A+ A Sbjct: 582 RAAYFEKN-NGTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 639 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 640 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVRLEWVLGNIEAAHE 699 Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + + LK C +S+ + ++ Sbjct: 700 LCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLEEKV 759 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP PE+ L + + A L +E S ++ Sbjct: 760 GQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 817 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + P Sbjct: 818 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEP 875 Query: 391 D 391 D Sbjct: 876 D 876 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 22/225 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ A+ + +P P A + + + A + K + ++ + Sbjct: 293 DIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSEDVW 349 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L A L+ D + + ++++ S+ I AA+ R + +L K + Sbjct: 350 LEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALE 401 Query: 289 -VNPHPEIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 V+ + L E+ L RA E SVE + ++++ + + A Sbjct: 402 NVSKSVRLWKTAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENARR 454 Query: 347 KAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 455 VLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 498 >gi|262373264|ref|ZP_06066543.1| conserved hypothetical protein [Acinetobacter junii SH205] gi|262313289|gb|EEY94374.1| conserved hypothetical protein [Acinetobacter junii SH205] Length = 572 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 2/167 (1%) Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R+ + + R+L+ + D+ A+ + A ++ + A + + ++ A Sbjct: 78 RSNSTTIKQRALDVALEYNDLQAALNIATHWVEQEPKDVPALFYLSHIALKTHEYELAAK 137 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340 L+KI ++P ++ I + EN + L K++ L +++ + + G Sbjct: 138 TLDKILNIDPTSDLEQILAGIAPENAQDREILLNALRASTEKDNPSILALIAGLEAQDGL 197 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 +QA A++ + F+L+ + + W A Sbjct: 198 YEQALKNINRALRKRSKSTSFILMKANLLMALQDDEATQKWFAKASR 244 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 101/317 (31%), Gaps = 53/317 (16%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G +A GL A NI A + S + LL + A +K Sbjct: 190 GLEA-QDGLYEQALKNINRALRKRSKSTSFILMK----ANLLMA----LQDD--EATQKW 238 Query: 144 EMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWV---------- 190 + E+ +I D +A + P+A Sbjct: 239 FAKASRKNKENLDIR--LAEARYYIKINDQQTALEKLEDVIKDHPNAEEALFIAGLTSID 296 Query: 191 -------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDM 242 + +V +K + A +L + + + +A L+ SL + +M Sbjct: 297 LKQYEKAEQYLVDLRNSSKYQNEAYYYLAINAQRKQHYETAKAYYRLVDGSLYIVSRRNM 356 Query: 243 I---ASYHDAIESLKLC-------DNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291 I ++L+ A A L N K+ A +L++ K P Sbjct: 357 IAIFEKQEQLNDALRFLTQERVNYPQHASFLYQAQADILKKMNNKKAALALLDEAIKNLP 416 Query: 292 H-PEIANIYTHLL---SENTVGKL-KRALRLEEINKESVESLVIVS-KIALEMGSIDQAH 345 PE+ IY +L KL K +L I S L + +AL+ + +A Sbjct: 417 DDPEL--IYAEVLLLDPFTDRDKLDKTLKQLLAIEPNSPTYLNAYAYTLALQNRRLKEAR 474 Query: 346 AKAMLAMKIAPRKEIFL 362 A LA++ AP + L Sbjct: 475 KYAELALEFAPEQASIL 491 >gi|34581593|ref|ZP_00143073.1| hypothetical protein [Rickettsia sibirica 246] gi|28262978|gb|EAA26482.1| unknown [Rickettsia sibirica 246] Length = 334 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 84/260 (32%), Gaps = 11/260 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ F + + V I + T+ F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGFTFIERFDSKVFINLYDYNIETTLFFSLILGLLLLISCFIVIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116 + P+ + ++ KR + AL +++ A + A +S + Sbjct: 61 FLILIIDLPSKIHNIFSKRKINHDRYAL---ILAFAEYIMNNKAKSASIARKNLSSEDLK 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ L+ + + ++ + +L A+ Y Sbjct: 118 DSQEFHNLILAVTEE---DVDRKIAYFQKLITSKEFVCYGSKNLAKLYYDKSFYEQAENY 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235 ATKA + + +++ Y W++ I N+ K + E A + + + Sbjct: 175 ATKAYNFNALDIDNLITLMRCYARLSLWTKFIFITNKLAKFHKYESMPEIAEYYLLAAKQ 234 Query: 236 NADKGDMIASYHDAIESLKL 255 + + + ++ L Sbjct: 235 EVESNNTANAIDYLATAIDL 254 >gi|294085101|ref|YP_003551861.1| putative TPR repeat-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664676|gb|ADE39777.1| putative TPR repeat protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 734 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 81/274 (29%), Gaps = 18/274 (6%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEY-LVYLLEVQIALAERQYNIAHEKL-EMML 147 L+++ + +A+ F L+ LL + + + A + + Sbjct: 18 QALIAL-YNQGEMAQTERQCRMALQEFPRSVTLLNLLGA-AFQTQGKLDFAASAFVKAIA 75 Query: 148 QIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 P + Y + + D +A+ KAL ++PD + + Sbjct: 76 LNPKDAQLHNNYGVVLLALSSFD--TARACFLKALKLTPDYVEAHNNLGNALRSLGQLDA 133 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+T N+ + + R + M A+ ++L + I A I Sbjct: 134 ALTRYNKAIAIQPTYGQ----AHYNRGVTLQQMQQMTAALASYEDALAVQPEFIEAHINR 189 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 K A E ++P H + IY + + Sbjct: 190 GVIFQQLGKADDAITSYELALTIDPDHAETHNNMGIIYAGTGDHERAQ--TYYEKALALK 247 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + VE + ++ + E G A A A+ Sbjct: 248 PDYVEGYINLATMLFETGHTAAAIAHLETALGYD 281 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 64/225 (28%), Gaps = 37/225 (16%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A E + P E ++ GD AQ Y KAL + PD Sbjct: 197 GKADDAITSYELALTIDPDHAET-HNNMGIIYAGTGDHERAQTYYEKALALKPDYVEGYI 255 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + AI L ++ N A+ L +GD++ + + Sbjct: 256 NLATMLFETGHTAAAIAHLETAL----GYDANDAMAHNLYGLLKKAQGDVVGALASYATA 311 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 + + PH I S L Sbjct: 312 IAQNPDF-----------------------------AEPH--INTGLALQQSGAHASALA 340 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 R +IN + E+ + E+G D A A A+ +AP Sbjct: 341 AFDRAIKINPDHAEAYNNKAVTLQELGRFDAALASYDQAITLAPD 385 >gi|307194475|gb|EFN76767.1| Pre-mRNA-processing factor 6 [Harpegnathos saltator] Length = 931 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 35/191 (18%) Query: 135 QYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E LE +LQ P + + GD+ +A+ + A +P++ Sbjct: 574 KTYGTRESLEALLQRAVAHCPKSEILWLMG-AKSKWLAGDVPAARGILSLAFQANPNSEE 632 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAILLIARSLE 235 + A V+ E+ RA L + + +A A+ L+ +LE Sbjct: 633 IWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALKNLDAALHLLKEALE 692 Query: 236 NADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 D G+ + +++K C +SI ++ +N+ KA Sbjct: 693 AFDDFPKLWLMKGQIEEQQGNADKALETYNQAIKKCPHSIPLWRLLSQLEHRRNQVTKAR 752 Query: 281 VILEKIWKVNP 291 +LEK NP Sbjct: 753 SVLEKARLKNP 763 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 335 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + +S++ S+ I AA KR + K Sbjct: 336 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETEVKAKR---RVFRKA 385 Query: 287 WKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SV+ + ++++ + D A Sbjct: 386 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468 >gi|302344515|ref|YP_003809044.1| hypothetical protein Deba_3097 [Desulfarculus baarsii DSM 2075] gi|301641128|gb|ADK86450.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM 2075] Length = 803 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 79/207 (38%), Gaps = 10/207 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + L+ A++ +A+ + P + +V+ + ++ A L + E Sbjct: 217 MKQNKLDQAEKTLREAIAMRPQEARLQLMLVELLMRRQKSDEAGKTLREIIARHPENESY 276 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 R ++ + G + +E++++ +SI SI A S+ + KA+ L+ Sbjct: 277 R----LSLARFYETTGQEKKAEETYLEAVRMAPDSIWPSILTATFYASRGQGHKAQAYLD 332 Query: 285 KIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + K+ P P A +L K+ ++ ++ +L + +I LE G Sbjct: 333 QAKKIAPDSPVPPTAMAELNLEQGRVELAQKQIKQVLARWPKNAAALTLQGRIQLEDGQA 392 Query: 342 DQAHAKAMLA---MKIAPRKEIFLLLA 365 QA A M +P + +A Sbjct: 393 QQAVASFTQVIGDMPESPEAYFYRAMA 419 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 104/318 (32%), Gaps = 51/318 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM----MLQIPATR 153 + LA+K V + + L L+ +I L + Q A M + P Sbjct: 356 GRVELAQKQIKQVLARWPKNAAALT--LQGRIQLEDGQAQQAVASFTQVIGDMPESPEAY 413 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--- 210 ++ +++ G+ AQ K + ++P+ + E ++AI Sbjct: 414 F--YRAMAYQAL--GERQLAQADVAKTISLAPENIRARFFMASLQAQGGEVTQAIGEVNE 469 Query: 211 ------------------------LNQKKKNAKEWNRNR---AILLIARSLENADKGDMI 243 L+Q + + R R A+ + D + Sbjct: 470 IIKQEPKNAEAMSMRGQLYMSQGNLSQAEADFNALTRLRPDMAVGYYLMGRLLETRKDPV 529 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298 + +L + + A + Q + ++A +E H +A++ Sbjct: 530 KAAAQYELALAKDPDYLPALRRVVFLDLQQGQAQRAVARVESQLAKAKRKDAVHTFLADV 589 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y L + + + + L IN E+ +++ ++ ++ G +D+A + + P Sbjct: 590 YQRL-GQTAISRQQYERALA-INPENTSAMLGLATLSRFDGDLDKASQLLDRVLVLEPTS 647 Query: 359 EIFLLLAQIEQANSHNTD 376 L+A + + H Sbjct: 648 ----LVALVSRGQLHEQA 661 >gi|239606806|gb|EEQ83793.1| DnaJ domain-containing protein [Ajellomyces dermatitidis ER-3] Length = 765 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 19/186 (10%) Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ + L A + ML+ + G+ A R+ Sbjct: 413 RLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDPDALLIRG--RLFYAQGENEQAIRHF 470 Query: 178 TKALDISPDAPWVT------EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225 AL++ PD+ + +++ A+++ AI + + + Sbjct: 471 KLALNLDPDSTQAVRYLRMVQKLLRMKDEGNAAFKARKYQEAIDVYTKALEVDPKNKDIN 530 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + LL R+ + + + D ++LKL + + A AK+ + +A +K Sbjct: 531 SKLLQNRAQAYLNLSNYDKAIEDCTDALKLDPSYVKAQRVRAKAYGASGNWEEAAREFKK 590 Query: 286 IWKVNP 291 I + NP Sbjct: 591 IAEANP 596 >gi|332084569|gb|EGI89763.1| cellulose synthase operon protein C [Shigella boydii 5216-82] Length = 1157 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHNQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARTAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNTSLNTQPRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 19/162 (11%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARTAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQ-RYAT------KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 GD +A+ + A +L+ P + + A N+ Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNTSLNTQPRVALA-------QAQLGDTAAAQQTFNK 696 Query: 214 --KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + A++L + A GD + +++ Sbjct: 697 LIPQAKSHPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|160872774|ref|ZP_02062906.1| methyltransferase domain family [Rickettsiella grylli] gi|159121573|gb|EDP46911.1| methyltransferase domain family [Rickettsiella grylli] Length = 581 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 83/240 (34%), Gaps = 23/240 (9%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + ++G+ A++ L I P A+ ++W AI ++ + + R Sbjct: 28 AQKLGNFTDAKKRYEHILSIQPTHAEAMHALGILASELQQWETAILWIQRALAIQPDSAR 87 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + + + + +L + A A N+ + A Sbjct: 88 ----FHLHLANGFKNTNQLKCALTHYQAALFFDPHYAEAHNNLAGLFYKNNQLKMAYQHC 143 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++ K+ P H + I+ + + + +L +++ S+++ ++ + E Sbjct: 144 QQAIKLKPNYLEAHINLGLIFLAQHKKEAA--ILQFKQLLKLHPHSIQAHWQLAALYWEE 201 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-----LLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +++ H + + P L L+ + E N +++ + AL DP Sbjct: 202 ENLENVHYHYQKILALDPYSVELLNNFAALMLKKE-----NVAAAIHYFKRAL--ALDPQ 254 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 98/240 (40%), Gaps = 15/240 (6%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + A ++ E +L I T A+++L + + +A + +AL I PD+ Sbjct: 28 AQKLGNFTDAKKRYEHILSIQPTHAEAMHALGILASELQQWETAILWIQRALAIQPDS-- 85 Query: 190 VTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A ++ + + + + A ++ + A + + +Y Sbjct: 86 ---ARFHLHLANGFKNTNQLKCALTHYQAALFFDPHYAEAHNNLAGLFYKNNQLKMAYQH 142 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLL 303 +++KL N + A I ++Q+KK A + +++ K++PH ++A +Y Sbjct: 143 CQQAIKLKPNYLEAHINLGLIFLAQHKKEAAILQFKQLLKLHPHSIQAHWQLAALY---W 199 Query: 304 SENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 E + + ++ ++ SVE L + + L+ ++ A A+ + P+ +I Sbjct: 200 EEENLENVHYHYQKILALDPYSVELLNNFAALMLKKENVAAAIHYFKRALALDPQHKIAR 259 >gi|327351273|gb|EGE80130.1| hypothetical protein BDDG_03071 [Ajellomyces dermatitidis ATCC 18188] Length = 765 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 19/186 (10%) Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ + L A + ML+ + G+ A R+ Sbjct: 413 RLMRAEAYLKMGNVNTLGDAQNIVMSMLRDNNQDPDALLIRG--RLFYAQGENEQAIRHF 470 Query: 178 TKALDISPDAPWVT------EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225 AL++ PD+ + +++ A+++ AI + + + Sbjct: 471 KLALNLDPDSTQAVRYLRMVQKLLRMKDEGNAAFKARKYQEAIDVYTKALEVDPKNKDIN 530 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + LL R+ + + + D ++LKL + + A AK+ + +A +K Sbjct: 531 SKLLQNRAQAYLNLSNYDKAIEDCTDALKLDPSYVKAQRVRAKAYGASGNWEEAAREFKK 590 Query: 286 IWKVNP 291 I + NP Sbjct: 591 IAEANP 596 >gi|228984698|ref|ZP_04144870.1| hypothetical protein bthur0001_13990 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774896|gb|EEM23290.1| hypothetical protein bthur0001_13990 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 434 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 241 --QELKELDSEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|150395286|ref|YP_001325753.1| TonB-dependent receptor [Sinorhizobium medicae WSM419] gi|150026801|gb|ABR58918.1| TonB-dependent receptor [Sinorhizobium medicae WSM419] Length = 1198 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 76/256 (29%), Gaps = 21/256 (8%) Query: 80 NYDKGYKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G A + + +IP A + +Q + L Q+A+ + Sbjct: 334 RDASGRYAGMAQAWTAGFREDIPAAIAVIKRAERQ-YPDDPTLPAA-RAQLAMLLDDRDE 391 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCR------IGDLNSAQRYATKALDISPDAPWVTE 192 + +E L I A+ E+ DL A +AL +P + + Sbjct: 392 LRDGVERALSIDPEDPTAL-----EARAHYRYHIDNDLEGALSDLNRALQTAPGSSSIWN 446 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ + A K A + + +++ D+ M + + + Sbjct: 447 ALGLVQGARGDNRAA----EAAFKQAIALDPLDPVSHANLAIQYLDEMRMAEAKREIDTA 502 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L + + +A + + + +A L NP A + ++ Sbjct: 503 LSVDPSFDVALVARGRYQMQNGDVDRAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIP 562 Query: 313 RALRL---EEINKESV 325 A L + ++ Sbjct: 563 AAQALDNADRLDPNDP 578 >gi|94971143|ref|YP_593191.1| TPR repeat-containing serine/threonin protein kinase [Candidatus Koribacter versatilis Ellin345] gi|94553193|gb|ABF43117.1| serine/threonine protein kinase with TPR repeats [Candidatus Koribacter versatilis Ellin345] Length = 769 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A++Y KAL ++PDA A+ + +++ A + + A + A L+ Sbjct: 556 ELAEKYGQKALQLAPDAADTHLAIGSIAAIKYDYNTAAREFRRATELAPDSG--YASDLL 613 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + +L D I + A ++L+L + A ++LI+Q + +A E++ +++ Sbjct: 614 SWALSYQIPPDPIGAEAAARKALRLQASIYPAYYHLGRALIAQGRYSEALESFEQMRRLS 673 Query: 291 P 291 P Sbjct: 674 P 674 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 53/169 (31%), Gaps = 9/169 (5%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMM 146 L G ++ ++ A + + + + Y LL A Sbjct: 577 LAIGSIAAIKYDYNTAAREFRRAT-ELAPDSGYASDLLSWALSYQIPPDPIGAEAAARKA 635 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L++ A+ A Y L G + A + +SP + Q Y+ E+ + Sbjct: 636 LRLQASIYPAYYHLGRALIAQGRYSEALESFEQMRRLSPTSNTAGLGFGQVYIAQGEYDK 695 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 AI L + + + I + A KGD + ++ L Sbjct: 696 AIEVLLK-------YPQANTINYYWLAAAYAAKGDNAKALATIQKAFDL 737 >gi|46581167|ref|YP_011975.1| TPR/GGDEF domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450588|gb|AAS97235.1| TPR/GGDEF domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 891 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 21/194 (10%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A E LQ A+Y+L +G+ A++ K L +P + Sbjct: 705 GRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVR 764 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Q K +++A + N+ + ++ + + +G + ++L Sbjct: 765 LGQLAEGEKRYAQARQYFNKAARAGDSG----GLVHRNLARLSMRQGRPDEAREHLHDAL 820 Query: 254 KLCDNSIMASICAAKSLISQNK--------KRKAEVI---LEKIWKVNPHPEIANIYTHL 302 +A A+ + + R++ + L++ W E+A Sbjct: 821 LRNPQDAVALQLMARLYLDGGEDPAMAEALSRQSVALRPDLKQGWL-----ELARA-LDA 874 Query: 303 LSENTVGKLKRALR 316 + R Sbjct: 875 RGHVAEAREARLRA 888 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 8/197 (4%) Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYK--ALYT-GLMSIAAHNIPLARKMHSYVSQQHT 115 V L + K ALY G + + ARK + + Sbjct: 697 LGVCMAGLGRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAP 756 Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 H LV L Q+A E++Y A + + + +L S R G + A+ Sbjct: 757 GHVFALVRL--GQLAEGEKRYAQARQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEARE 814 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + AL +P + + + Y+ E A+ ++ A + + L +AR+L+ Sbjct: 815 HLHDALLRNPQDAVALQLMARLYLDGGE-DPAMAEALSRQSVALRPDLKQGWLELARALD 873 Query: 236 NADKGDMIASYHDAIES 252 +G + + + + Sbjct: 874 --ARGHVAEAREARLRA 888 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 41/226 (18%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A AL ++ A + Q + + Sbjct: 671 GDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKP----GDPM 726 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L G+ + + LK + A + + ++ +KR A+ Sbjct: 727 ALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQL--AEGEKRYAQ------- 777 Query: 288 KVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 A Y + + ++ G + R ++++++ G D+A Sbjct: 778 --------ARQYFNKAARAGDSGGLVHR----------------NLARLSMRQGRPDEAR 813 Query: 346 AKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMP 390 A+ P+ + L L+A++ + + A+ Sbjct: 814 EHLHDALLRNPQDAVALQLMARL-YLDGGEDPAMAEALSRQSVALR 858 >gi|189463811|ref|ZP_03012596.1| hypothetical protein BACINT_00144 [Bacteroides intestinalis DSM 17393] gi|189438761|gb|EDV07746.1| hypothetical protein BACINT_00144 [Bacteroides intestinalis DSM 17393] Length = 340 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 90/233 (38%), Gaps = 14/233 (6%) Query: 130 ALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A + + A + + + T + L + L+ A + PD Sbjct: 60 AQRMGRPDYAIKCFTEALALQEDFETMSY----LSQVYIQTNALSEAHELLERMAKQEPD 115 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + L +++ +A+ QK +E N A L+ R+ + D G I S Sbjct: 116 HTSTFLTLANVCYLQEDY-QAMADAAQKAIEIEEGNAM-AHYLLGRAKQGMDDG--IMSI 171 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 +++ L D+ A + A++LI + ++A ++ I +P E A + + E Sbjct: 172 AHLTKAIVLKDDFTEARLLRAEALIKMQQYKEATEDIDAILSQDPDEEAALLLRGKVKET 231 Query: 307 TVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 T + + + E+N + ++ + + ++ + +A A A+++ P Sbjct: 232 TGQQEEAETDYRYVTELNPFNEQAFLCLGQLYIVQKKYPEAIALFDEAIELNP 284 >gi|328874364|gb|EGG22729.1| hypothetical protein DFA_04859 [Dictyostelium fasciculatum] Length = 541 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 29/253 (11%), Positives = 83/253 (32%), Gaps = 32/253 (12%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + A+K+ + L L L V+ + A + E ++++ Sbjct: 184 DYATAKKLLEQAVALDKDYLPALGSLGDLHVKT----GTLDRALKYYERVVELQPHNLNG 239 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L + + G +SA + + + + + ++ + + K Sbjct: 240 LLGLGHVALKQGSTDSAVKLYQRVVRLG-----------ASQAESLNYATGVDTNLMRLK 288 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + E+N + + + + G + ++K+ S+ A A + + Sbjct: 289 KSAEYNPIYSASIC-LANIHERHGRFDNALEAINTAIKIHPGSVYAHSICASIHLRNKEP 347 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVG--KLKRALRLEEI---------NKESV 325 KA ++ +V+P+ E A + ++ + + K ++ L + V Sbjct: 348 LKAIDTIDSALRVDPNNEFAKT---IRADALMDMNRFKESIGLYREVIANIMERDRPDEV 404 Query: 326 ESLVIVSKIALEM 338 + + + + Sbjct: 405 NTRIAILHNMIAA 417 Score = 43.4 bits (101), Expect = 0.079, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 75/233 (32%), Gaps = 29/233 (12%) Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L ++ G + ++A++ P P Y +++ +AI Sbjct: 104 LLHQASALVDQGSTEESISLLSEAIESCPADPRAYGLRADLYEHTRQYQQAI-------- 155 Query: 217 NAKEWNRNRAIL------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 ++ + +L L + + A D + +++ L + + A Sbjct: 156 --PDYRKVVELLPESIPALSSLADCYASLDDYATAKKLLEQAVALDKDYLPALGSLGDLH 213 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 + +A E++ ++ PH + + L +T +K R+ + ES Sbjct: 214 VKTGTLDRALKYYERVVELQPHNLNGLLGLGHVALKQGSTDSAVKLYQRVVRLGASQAES 273 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + G +D + + + P + LA I + + + + Sbjct: 274 ------LNYATG-VDTNLMRLKKSAEYNPIYSASICLANIHERHGRFDNALEA 319 >gi|229577290|ref|NP_001153341.1| O-glycosyltransferase [Nasonia vitripennis] Length = 1061 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 121 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 178 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L G++ A + K Sbjct: 179 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 230 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 231 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 286 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + +++L N A A +L + + +AE ++ P H + N Sbjct: 287 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNN 346 Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E +L LE E + ++ + + G +++A A++I Sbjct: 347 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 404 Query: 355 APR 357 P Sbjct: 405 QPT 407 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 256 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 315 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + A L + ++G + + +++L++ Sbjct: 316 ALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKREQGYIEEATRLYLKALEVF 371 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 372 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDVQGAL 429 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 430 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 475 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 321 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 377 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 378 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 437 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 438 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 487 >gi|197120668|ref|YP_002132619.1| hypothetical protein AnaeK_0248 [Anaeromyxobacter sp. K] gi|196170517|gb|ACG71490.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K] Length = 1256 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 98/306 (32%), Gaps = 18/306 (5%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 + R + L L + ++ R L Sbjct: 307 LEQRVKAARGPRAEAEARLELARVLAARQGGDVQERRAAAEARRAALLAPGWVEAQL--- 363 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + A E + +++E L + A+ +L E G +A R +A+ +P Sbjct: 364 EAAALEEDHGRRRQRIEAALAVAPEDPRALRALGQEELDQGRPQAAARLLERAVRAAPGW 423 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + A A L + + A+ ARS + + ++ Sbjct: 424 AAPRVELAEALSRAG--LEARGALLAEATASAFATVPSAVRAAARSARRLGRTEEASARS 481 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 + +L+ D A++ A+ L + A +LE+ +++P +++Y L + Sbjct: 482 RTLVALRFDDAQTRAAL--AQILADRGDVAGARALLEEALRLDP----SDVYQRLRLGDL 535 Query: 308 VGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + R + + ++ + L G + A A A+++ P+ Sbjct: 536 LAASGRGEEAERAYAAALALAPDEPDAWERRGRARLSQGRVKDAQADLQRALELRPQSPE 595 Query: 361 FLLLAQ 366 LL + Sbjct: 596 LKLLVR 601 >gi|94734310|emb|CAK04778.1| novel protein [Danio rerio] Length = 706 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 57/365 (15%), Positives = 113/365 (30%), Gaps = 49/365 (13%) Query: 27 DVSITWGNRLYRTSPFVILSILYFFLF----AWILLFAVSR-FFLSCPAMLFHMLHKRN- 80 V WG S V+L + + W+ A+ R + P + N Sbjct: 370 SVVSRWGAAALTVSMLVVLLLFSWKTVQQNEIWLSREALFRSGIQTLPHNAKVHYNYANF 429 Query: 81 -YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYN 137 DKG A + + + H L L L Q Sbjct: 430 LKDKGRN--------------QEAIYHYKTALRLYPRHASALNNLGTLTHQA-------E 468 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A L I A+++L G A+R +++ P ++ Sbjct: 469 EAEVYYRRALDINPQHNRALFNLGNLLKSQGKEEEAERMLKESIRFGPHFADAYSSLASL 528 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y A + +N E + L + D G + E+++L Sbjct: 529 YADQGHSKEANEIYTKGIENCPESSD----LHNNYGVFLVDTGRGDRAAFHYQEAVRLKP 584 Query: 258 NSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 +A + + L S N ++A ++ K+ + P + +Y + E + Sbjct: 585 AHYVAMVNLGRLLRSSNDNKEAELWYKRALQVVRKVDILTP---LGALYYNTGRYEEALE 641 Query: 310 KLKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + A L +S + + +++ +A+ S++ + K + E + LL+ I Sbjct: 642 VYREASTL---QPDSTDIWLALAQVLAMAGRSMEAEKMTLGIISKTSNCIECYRLLSAIY 698 Query: 369 QANSH 373 + Sbjct: 699 SKQGN 703 >gi|120555274|ref|YP_959625.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8] gi|120325123|gb|ABM19438.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8] Length = 585 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 65/225 (28%), Gaps = 26/225 (11%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + G+ A A + P + ++ Y K+ Sbjct: 150 MEQIMDQGEDADFDSLAAMAAGLPPAQ---QQELLALYSQ------------LAVKHPDN 194 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +I L+ + G + + L+ N A I L +KR+A Sbjct: 195 PELQYSIALLQK-----ITGTPTVALRQINQLLEQAPNFQPAIILKGDLLYQTGQKREAL 249 Query: 281 VILEKIWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L + P ++ +Y + RL + E+ + + +ALE Sbjct: 250 NYLTTNTRRFPANRQMGTLYGRMLINEGELQAAQDEFERLVKRYPETPGLRLSHALVALE 309 Query: 338 MGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQANSHNTDKILY 380 A + ++ + + L +IE+ + I + Sbjct: 310 NQQPALAREELTRLIEQGHHEDEASYYL-GRIEEDAGNTDQAIEH 353 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 39/272 (14%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L L+++ LAR+ + + +Q +E YL +I + A E + + Sbjct: 301 LSHALVALENQQPALAREELTRLIEQGHHEDEASYYL--GRIEEDAGNTDQAIEHYQSVQ 358 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---WVTEAVV--------- 195 + + ++ G+L+ A + + +PD W+ E + Sbjct: 359 RGNYFFPSLARASELQAQA-GELDQAIAHIQNLRERAPDHAEKFWLLEVNLLIDQERNEQ 417 Query: 196 ---------QQYVLAKEWSRAITFL----------NQKKKNAKEWNRNRAILLIARSLEN 236 ++Y E A L Q K E A+ L A Sbjct: 418 ALAAADAALERYPNNVELRYARAMLQDTMGEPAGAEQDLKTILELQPENAVALNALGYIL 477 Query: 237 ADKGDM-IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + D + ++L L + L Q + +A L + W+ P PE+ Sbjct: 478 TVRTDRLDEARGYIEKALALDPENPAILDSMGWILFRQGETNQALDFLARAWEAYPDPEV 537 Query: 296 ANIYTH---LLSENTVGKLKRALRLEEINKES 324 A Y + ++ L + N Sbjct: 538 AAHYGEVLWVTGNEEQARIIWEEGL-DQNPNH 568 >gi|242279894|ref|YP_002992023.1| hypothetical protein Desal_2428 [Desulfovibrio salexigens DSM 2638] gi|242122788|gb|ACS80484.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens DSM 2638] Length = 794 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 90/244 (36%), Gaps = 9/244 (3%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + + L QI L E + N+A + +++ A L G+ N A Sbjct: 368 PKDAEAHYLRGQIYLLEGRGNLAVSEFRQVVRDNPESAPAYVLLARAHLVNGETNIAIEN 427 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +A+++ P E ++ Y+ K+W +AI L + ++ + +L A Sbjct: 428 LKEAINLEPGYAPAREVLINTYLDRKDWHQAILELQRLREKRPD----DIQILAAIGDVY 483 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + KGD + E + +S + + A+ S K AE+ KV P +A Sbjct: 484 SIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARSLGKNSLAEMHYTAALKVAPD-SLA 542 Query: 297 NIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 I +L RL + ++ ++ K+ G+ + A A+ Sbjct: 543 AIQGKVDIFILQHKYTAATNFCERLLQKFPDNARIYELLGKVHAAWGNFEDAETNYSRAV 602 Query: 353 KIAP 356 +AP Sbjct: 603 TLAP 606 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 102/313 (32%), Gaps = 54/313 (17%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 N A ++ + V H E +L ++ +++++ + L+ L A+ Sbjct: 243 GNDTKAAELMAEVVHNH--PEEAEYRVLYSRVLNSQKKFVETEKVLKEGLTYQASSLAVR 300 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW------SRAITFL 211 SL G A R + + P+ ++ VV + LA + ++AI L Sbjct: 301 SSLAGLYMAQGRQEEAIRVLLDGVALDPEGTESSDYVVYRKQLATMYLDMNEPNKAIEQL 360 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + E N A R +G + + + ++ S A + A++ + Sbjct: 361 D----SVIELNPKDAEAHYLRGQIYLLEGRGNLAVSEFRQVVRDNPESAPAYVLLARAHL 416 Query: 272 SQNKKRKAEVILEKIWKVNP--HPE---IANIYTHLLS------ENTVGKLKR------- 313 + A L++ + P P + N Y E + KR Sbjct: 417 VNGETNIAIENLKEAINLEPGYAPAREVLINTYLDRKDWHQAILELQRLREKRPDDIQIL 476 Query: 314 -------------------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L E +S + ++++A +G A A+K+ Sbjct: 477 AAIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARSLGKNSLAEMHYTAALKV 536 Query: 355 APRKEIFLLLAQI 367 AP LA I Sbjct: 537 APDS-----LAAI 544 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 71/204 (34%), Gaps = 7/204 (3%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G+ A A D++P + + + Y+LA+E+ A + + + Sbjct: 69 ALENGNFQGAFVNFRYASDLAPASVEAKVELSKLYLLAREYDDAGDTARKAL--NLDASN 126 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L++ + A+ + +L + + + I Q KAE L Sbjct: 127 IEARLVL--ASVLAESRKFSEAQKMLEIALNEDPGNPDVYLSMSSVFIRQGNMEKAEDAL 184 Query: 284 EKIWKVNPH--PEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K P + + + +++ LK +L + + + V ++ MG+ Sbjct: 185 LDGLKRLPQNTSLLMKVVAFYRKNDDPDTALKYVEKLLQSSDADPRTKVFAAEFYSTMGN 244 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLL 364 +A + P + + +L Sbjct: 245 DTKAAELMAEVVHNHPEEAEYRVL 268 Score = 37.2 bits (85), Expect = 6.8, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 53/148 (35%), Gaps = 6/148 (4%) Query: 112 QQHTFHNEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 Q+ + +L + + N+A + + L + +G Sbjct: 463 QRLREKRPDDIQILAAIGDVYSIKGDKNLASRTYNELSEKFPDSPVGEMKLAELARSLGK 522 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A+ + T AL ++PD+ + V ++L +++ A F + + + R +L Sbjct: 523 NSLAEMHYTAALKVAPDSLAAIQGKVDIFILQHKYTAATNFCERLLQKFPDNARIYELL- 581 Query: 230 IARSLENADKGDMIASYHDAIESLKLCD 257 +A G+ + + ++ L Sbjct: 582 ---GKVHAAWGNFEDAETNYSRAVTLAP 606 >gi|284039246|ref|YP_003389176.1| hypothetical protein Slin_4396 [Spirosoma linguale DSM 74] gi|283818539|gb|ADB40377.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74] Length = 602 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 92/275 (33%), Gaps = 26/275 (9%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATR 153 + + + A + + LL ++ + +++Y A + E +L+ P Sbjct: 113 LKSGKVTEALPFAAKAHALDVDNK--FYSLLLAELYVKQKRYGEAEDLYEALLKKGPENA 170 Query: 154 EFAV----YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 E+ V L+ E + A K +T + Y+ + +AI Sbjct: 171 EYGVELAAIYLFNEK-----PDKALEAYNKVERELGLNEEITRQKQRIYLKQNKIEKAIE 225 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 K ++ + + L+ + + +LKL + A + A Sbjct: 226 EAE-KLVASEPSDPDY---LLEGAELLIANDRPDQAIGWIDRALKLSTDLPQAHVLLADI 281 Query: 270 LISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTV---GKLKRALRLEEI 320 + + L ++ NP+ E I + Y + NT L A L + Sbjct: 282 YRKKGDMDRVSKELNQV-LANPNLEAGLKARILSSYMGMTGSNTAAQQDALAMAQNLAKT 340 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++ V+++ + ++ G +A A ++ Sbjct: 341 SPNDPKTQVMLADLLMQQGKKAEARDTYAKAARLD 375 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 79/254 (31%), Gaps = 40/254 (15%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 L + + A + +LQ A YS + G + A +A KA + D + Sbjct: 78 YLMTDEPSKAITQFAKVLQKDPNNAAAQYSTASAYLKSGKVTEALPFAAKAHALDVDNKF 137 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + YV K + A K E N + L A L N + +Y+ Sbjct: 138 YSLLLAELYVKQKRYGEAEDLYEALLKKGPE-NAEYGVELAAIYLFNEKPDKALEAYNKV 196 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 L L + + + + QNK KA +E+ Sbjct: 197 ERELGLNEE---ITRQKQRIYLKQNKIEKA---IEEA----------------------- 227 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQ 366 +L + L+ +++ + DQA +A+ P+ + LLA Sbjct: 228 -----EKLVASEPSDPDYLLEGAELLIANDRPDQAIGWIDRALKLSTDLPQAHV--LLAD 280 Query: 367 IEQANSHNTDKILY 380 I + Sbjct: 281 IYRKKGDMDRVSKE 294 >gi|163783159|ref|ZP_02178153.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1] gi|159881493|gb|EDP75003.1| hypothetical protein HG1285_14084 [Hydrogenivirga sp. 128-5-R1-1] Length = 341 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 18/218 (8%) Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYAT------KALDISPDAPWVTEAVVQQYVL 200 + T+E LY A+ Y+ +A I+P P + A+ Y+ Sbjct: 18 AKQEQTKESEWRHLYDLGMSA---YYARNYSEAIARLYRAAKIAPKEPLIWNALGMTYME 74 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +E+ +A + + ++ L I L D I +A+ I Sbjct: 75 VEEYKKAEEAFKRALASNPNHAESKMNLGILY-LRMKDYRRAIKFLQEALSDETFDKKHI 133 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRAL 315 A A+ ++K L+K NP E+ + Y +L Sbjct: 134 -AFYYLARVYRELGDRKKYLEYLKKATAYNPMFLDAQLELGSAYMDDKRYEEAERL--YK 190 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 L N ++ + + ++K+ E G ++A L ++ Sbjct: 191 SLIANNFKTPDIYLSLAKVYYETGDYEKAKETVKLVLE 228 >gi|322783907|gb|EFZ11098.1| hypothetical protein SINV_13115 [Solenopsis invicta] Length = 393 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 34/200 (17%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224 GD+ +A+ + A +P++ + A V+ E+ RA L + + +A Sbjct: 72 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMK 131 Query: 225 ------------RAILLIARSLENADK---------------GDMIASYHDAIESLKLCD 257 A+ L+ +LE D G + + +++K C Sbjct: 132 SAKLEWALNNLDAALHLLKEALEAFDDFPKLWLMKGQIEEQQGYLDKAIDTYNQAIKKCP 191 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR--AL 315 +SI A+ +N+ KA +LEK N P+ A ++ + R A Sbjct: 192 HSIPLWRLLARLEHKKNQVTKARSVLEKARLKN--PKNAELWLEAIRNELKNGGARDMAN 249 Query: 316 RLEEIN-KESVESLVIVSKI 334 L +E S ++ ++ Sbjct: 250 TLMAKALQECPTSGLLWAEA 269 >gi|304415007|ref|ZP_07395801.1| tetratricopeptide repeat-containing hypothetical protein [Candidatus Regiella insecticola LSR1] gi|304283093|gb|EFL91512.1| tetratricopeptide repeat-containing hypothetical protein [Candidatus Regiella insecticola LSR1] Length = 389 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 93/253 (36%), Gaps = 19/253 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A +M+++ R A Y L + G + A+ + D Sbjct: 83 GEVDRAIRIHQMLIENTSLTFEQRLLASYQLGRDYMTAGLYDRAESMFIRLTDEHDFCIG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASYHD 248 + ++ Y KEW +A+ + K KE R A +LE + D+ + H Sbjct: 143 ALQQLLLIYQAMKEWLKAVEVAEKLIKLGKEEQRIEAAHFYCELALEAMNDDDVNKAQHL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 ++ + AS+ + I+ + KA L+++ + + P + Y HL Sbjct: 203 LKKAALVDKKCARASMMLGQVYIANGEWIKAVDSLQRVLQQDKDIVSEVLPLLQGCYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-F 361 + K R + N + + ++++++ + + A A ++ P + + Sbjct: 263 QQIDNWT--KFLHRCVKKNTGTA-AELMMAELIEQKEGRNVAQAYINKQLQQYPTMRLFY 319 Query: 362 LLL----AQIEQA 370 L+ A E+ Sbjct: 320 RLMDYHLADAEEG 332 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A A M ++ +H F L LL I A +++ A E E + + Sbjct: 120 AGLYDRAESMFIRLTDEHDFCIGALQQLLL--IYQAMKEWLKAVEVAEKLIKLGKEEQRI 177 Query: 153 REFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 Y L E+ D+N AQ KA + + + Q Y+ EW +A+ L Sbjct: 178 EAAHFYCELALEAMNDDDVNKAQHLLKKAALVDKKCARASMMLGQVYIANGEWIKAVDSL 237 Query: 212 NQKKKNAKE 220 + + K+ Sbjct: 238 QRVLQQDKD 246 >gi|283781318|ref|YP_003372073.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] gi|283439771|gb|ADB18213.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] Length = 829 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 17/226 (7%) Query: 141 EKLEMMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-V 195 E M + A +L G + A L +PD P + + Sbjct: 446 HSYEAMWTDATAKAPQNLRAERALMVWLASSGRALESVDRARSLLAKNPDMPERHLNLAI 505 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++ + A + K + N A ++ + + G + +SL++ Sbjct: 506 ALHLNNE---PAEAEVQAKLAIDQLPNSEDAFYILGCAYDKL--GKKREAETAFRKSLEI 560 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGK 310 + A+ L ++ K LE+ K++P H ++A Y L + T Sbjct: 561 LPTFVDANHTLGHLLAAEGKVSDGAEFLERAVKIHPLHEGALQDLAVAYDLL--DRTEES 618 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 RL ++N + + + + +G +D+A A+ ++ P Sbjct: 619 EATFRRLLKVNPQHRVARDSYALLLQRLGRLDEAVAQYEYLVEQDP 664 Score = 36.8 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 7/195 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 ++G A+ K+L+I P + + S FL + K Sbjct: 543 KLGKKREAETAFRKSLEILPTFVDANHTLGHLLAAEGKVSDGAEFLERAVKIHPL--HEG 600 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ +A + + D+ + + + LK+ +A A L + +A E Sbjct: 601 ALQDLAVAYDLLDRTEESEATFRRL--LKVNPQHRVARDSYALLLQRLGRLDEAVAQYEY 658 Query: 286 IWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + + +P P + + + ++ E+I + E ++++ G Sbjct: 659 LVEQDPGDVGPRMNLAIACAMQGDVPRGIELLHEAEQIEPGNAEVQANLAQMLRRAGRDQ 718 Query: 343 QAHAKAMLAMKIAPR 357 A A+ I P Sbjct: 719 LASTHFRRALAIRPT 733 >gi|37523145|ref|NP_926522.1| hypothetical protein gll3576 [Gloeobacter violaceus PCC 7421] gi|35214148|dbj|BAC91517.1| gll3576 [Gloeobacter violaceus PCC 7421] Length = 526 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 81/245 (33%), Gaps = 20/245 (8%) Query: 126 EVQIALA---------ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 Q A + + A + L A A ++L G+ A + Sbjct: 29 MAQAAELLDLGLVLHRQGRLAEAIVRYGQALDFQADYVEAHFALGLALQARGEGEEAIHH 88 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +A+++ A+ +++ A+ + E+ + L Sbjct: 89 FQRAIELRSYYTDAHFALGTALQEQRDFEGALGCYQRTLAIEPEYVKAHNNL----GAVQ 144 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + G++ + +L L + + A L + + +A + ++ +++ P+ A Sbjct: 145 RELGNLDDAIASYRRALALEPDYLEAHNNLGVVLRERGQLEEAALCFKRAFQLQ--PDFA 202 Query: 297 NIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 Y +L + + I + VE+ V ++ G D A + A Sbjct: 203 EAYYNLGLLLHSQQKLAEAISVYRTALIIKGDLVEARVNLAHALQASGQGDAAIEEHRRA 262 Query: 352 MKIAP 356 +++AP Sbjct: 263 VELAP 267 >gi|85091330|ref|XP_958849.1| hypothetical protein NCU04606 [Neurospora crassa OR74A] gi|28920237|gb|EAA29613.1| hypothetical protein NCU04606 [Neurospora crassa OR74A] gi|28950046|emb|CAD70801.1| probable pre-mRNA splicing factor prp1 [Neurospora crassa] Length = 917 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 35/264 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E ++ A+ +A +PD+ + A V+ +A L ++NA Sbjct: 592 LAREKAAEAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARELLKTARQNAP 651 Query: 220 E---------WNRNR-----AILLIARSLEN---------------ADKGDMIASYHDAI 250 + R + A+ L+ ++L+ D G + + Sbjct: 652 TDRVWMRSVAFERQQGVNEAALDLVQQALQLFPSKPKLWMMKGQIYEDLGQLGPAREAYS 711 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309 ++ +SI + ++ N KA +L++ + P PE+ + E G Sbjct: 712 TGVRAVPSSIPLWLLYSRLEEKANNVVKARSVLDRARQAVPKSPELWTELIRV--ERRAG 769 Query: 310 KLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-I 367 L +A L + +S ++ ++ L + Q + A+K I L+ A I Sbjct: 770 NLNQAKSLMAQALQQMPKSGLLWAERILNLEPRTQRKSLLAEAVKKVEDDPILLVTAARI 829 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 A D+ W + AL D Sbjct: 830 LWAERK-LDRAQNWFEKALLLDRD 852 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 82/235 (34%), Gaps = 14/235 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 S +A+ A+ + P++ + A + L + + + Sbjct: 526 RASINRDKFATARAIYAYAIRVFPNSKSLYTAAIDLERNHGSKEDLWHALEKAVEACPHY 585 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + + + E A + + + + K +S + A K KA Sbjct: 586 E----VFWLMLAREKAAEAGVDEARLVLARAFKQNPDSEDIWLAAVKLEADNGFIDKARE 641 Query: 282 ILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +L+ + P +A ++E + +++AL+L + ++ +I Sbjct: 642 LLKTARQNAPTDRVWMRSVAFERQQGVNEAALDLVQQALQLF---PSKPKLWMMKGQIYE 698 Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++G + A ++ P ++LL +++E+ ++N K A A+P Sbjct: 699 DLGQLGPAREAYSTGVRAVPSSIPLWLLYSRLEEK-ANNVVKARSVLDRARQAVP 752 >gi|330506685|ref|YP_004383113.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328927493|gb|AEB67295.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 705 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 28/252 (11%), Positives = 67/252 (26%), Gaps = 14/252 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGD 169 + + + + A E + + P+ R L C G+ Sbjct: 445 RALDIEPQNPDALMGLAEALHQKGRLEEARSYYEAAIAEEPSVR--GYRGLGNILCAQGE 502 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + AL P S A+ N+ E + Sbjct: 503 YGQSIPLFESALSQEPSDTESLMGKGLALAATGNSSGALQCFNEIVSLNPE----DSAAW 558 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R A G + ++ + +S + ++ ++ E ++ Sbjct: 559 SNRGSIFAALGRYDEARESLQKAAGISSSSADIWYNLGQVYRLMDRHNQSRQAFENATRL 618 Query: 290 NPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ ++ L + LK R ++ ++ + ++ G +A Sbjct: 619 S--PDDPVLWLELGLAQERTGEAKLALKSLQRAVVLDPKNEFAQYSLALALAGQGRFQEA 676 Query: 345 HAKAMLAMKIAP 356 ++I P Sbjct: 677 LQAFERVLEINP 688 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 86/279 (30%), Gaps = 47/279 (16%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Q + A E +L+ + L D +S+ + +AL I+P Sbjct: 230 GQVDRAEEDYYTVLEKNPEDFESWRGLGMVRYATEDYSSSLQAFDQALKINPHDIQTILG 289 Query: 194 VVQQYVLAKEWSRAITF------------------------LNQKKKNAKEWNRNRAI-- 227 + +S A+ L ++K+ K + R + Sbjct: 290 KGDLLLARGNFSSALESYSAALLLKKDNVSALYGKGLALSSLGREKEANKCYRRILELEP 349 Query: 228 ----LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L + + ++ + I + L + A + AK+ + +A Sbjct: 350 DNIIALQKIADDLLERNESIQAAEHYGLILGQDPKNARALLGMAKAQLDLGDLDQALQSY 409 Query: 284 E----------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 E W I LL N ++ R +I ++ ++L+ +++ Sbjct: 410 EELLGHDSNSSAAW-------IGRGEILLLQTNIDPAIESFNRALDIEPQNPDALMGLAE 462 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 + G +++A + A+ P + L I A Sbjct: 463 ALHQKGRLEEARSYYEAAIAEEPSVRGYRGLGNILCAQG 501 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 75/217 (34%), Gaps = 12/217 (5%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 +GY+ L G + A + + Q E L+ + A + A + Sbjct: 488 RGYRGL--GNILCAQGEYGQSIPLFESALSQEPSDTESLMG--KGLALAATGNSSGALQC 543 Query: 143 LEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 L + ++ F + G + A+ KA IS + + + Q Y L Sbjct: 544 FNEIVSLNPEDSAAWSNRGSIFAAL--GRYDEARESLQKAAGISSSSADIWYNLGQVYRL 601 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +++ + + + +L + L G+ + ++ L + Sbjct: 602 MDRHNQSRQAFENATRLSPD----DPVLWLELGLAQERTGEAKLALKSLQRAVVLDPKNE 657 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 A A +L Q + ++A E++ ++NP ++A Sbjct: 658 FAQYSLALALAGQGRFQEALQAFERVLEINPKNDLAK 694 >gi|94311190|ref|YP_584400.1| cellulose synthase operon C-like protein [Cupriavidus metallidurans CH34] gi|93355042|gb|ABF09131.1| cellulose synthase subunit C [Cupriavidus metallidurans CH34] Length = 1267 Score = 54.2 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 12/172 (6%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + +++ A L E + L+ + GD + A + L Sbjct: 709 DRRIAEGDFNGARDTLYA----VPEAQQRDRRWLLELADLREAHGDFKGAADAARQVLAT 764 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVG 309 + A + A+ + +A I+ + P +I A +T L E+ Sbjct: 765 DPHDASAQLTLARQYERMGRTDEALDIVRTVLAEAPEDDIDTRLSVARRFTALRREDEAD 824 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + L+ + V +IA G + A A+ + R+ + Sbjct: 825 AV--VDALDARFPNRADITVQRGRIAQSRGDYNDAAEIYRTALGLEQRESVL 874 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 62/389 (15%), Positives = 118/389 (30%), Gaps = 70/389 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 D Y+A GL + + A Q+ E + L V+ L E +++ A E Sbjct: 285 DPAYQARQRGLAQLERGQLSEADIALQKAYQKRRNDAEVVGGLGLVR--LREGRHDEARE 342 Query: 142 KL-EMMLQIPATR---------EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 P+ + + V S ++ + G A+ A KAL P Sbjct: 343 LFARAQQLDPSNKWRSLMATATFWGVISKARDANKQGKPAEAEALARKALAQQPGNDSAE 402 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIAS----- 245 + + + + A L + + R+++ + + + D + + Sbjct: 403 GILADALIAQNKDAEAEALLRKMLARPKPDMGALRSLVELLQKEHRDAEIDPLIASVEPR 462 Query: 246 ---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + +++ S+ A+ L++Q K+ A LE ++ P Sbjct: 463 MKGSESEMRAMRADLLSV-----RAERLLAQQKRSPAIANLEASVRLQP--------DDA 509 Query: 303 LSENTVGKLKRALRLEEI----------NKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + T+ +L R L L + + E + + ID A Sbjct: 510 WTRFTLARLYRDLGLPALGRTVMDDGLKAAPTSEMRYATALYLNSVDDIDAATTVLAAVP 569 Query: 353 KIAPRKEI-----------FLLLAQIEQANSHNTDKILYWTQSA-LHAMPDPL------- 393 + + L A++ A H+ + A A DP Sbjct: 570 DAERSEGMRNLGHNLAAQRLLREARLRVAEGHDDE-ARALLHQAEQEAQNDPHMLASIGR 628 Query: 394 -WISDDG-----YLSSVWLPLSPISKTLC 416 WI+ +L S WL P L Sbjct: 629 EWIALGEPETGLHLVSDWLAAHPEDPHLD 657 >gi|323495046|ref|ZP_08100135.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546] gi|323310703|gb|EGA63878.1| tetratricopeptide repeat protein [Vibrio brasiliensis LMG 20546] Length = 389 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 92/287 (32%), Gaps = 51/287 (17%) Query: 98 HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + + + + +A + A + E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGFLDRAEKIFEQLVDEPDHREA 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + +V Y +EWS+AI + + Sbjct: 143 AL----------------------------------QQLVAIYQQTREWSKAINYASLLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K ++ R +++ +G+ + + +L + ASI K + Sbjct: 169 KMGRKRMRTSIGHFWCELAMQEKAEGNHAQAMQNFKRALAEDPKCVRASIALGKLYLDNE 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 R +E + + P +A Y HL E+ + R + S E Sbjct: 229 DYRSTIKYMEMVLDQDSDFVSEVLPTLAECYHHLGQEDELLNFLR-QCIVNKAGVSAE-- 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370 ++++++ + + A + P + L+ A+ E+ Sbjct: 286 LMLAQLVAQHDGVGAAQELLTRQLVKNPTMKGFYRLMDYHLAEAEEG 332 >gi|289209659|ref|YP_003461725.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp. K90mix] gi|288945290|gb|ADC72989.1| PEP-CTERM system TPR-repeat lipoprotein [Thioalkalivibrio sp. K90mix] Length = 935 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 90/296 (30%), Gaps = 14/296 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 N A ++ + Y L Q+ + + + A L E + + P E Sbjct: 326 GNWSQAERL--LERHHALGPANAMSYRLLAQLRIEQGRTQEARRILAEALSERPDLIEAL 383 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L GD +S +AL D P + E + V + + + L++ Sbjct: 384 GDQLAALYIGEGDTDSGIEVLREALANRADRPELQEMLGIALVRHGDHEQGMALLHRVAS 443 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + + + +L + + + +L+ + Sbjct: 444 ESADVR----LADYSVALAHIRDEQYEQALEATQRLRDKDPENPQGFNLMGAALLGLGEI 499 Query: 277 RKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A +I ++ + HP+ + + N + L+E + S + + Sbjct: 500 HEARLIYQEGLSL--HPDNSTLALNLSSLEVRQGNLETAREILEDLQERDPGHPTSAIRL 557 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + + G ++ A++ P + L+ Q + + A Sbjct: 558 ATLHFQQGEMEAGKRWLQDAIEAHPDRIEPYLMLARAQNQQEDHAAARSTLEKARE 613 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 76/237 (32%), Gaps = 19/237 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATRE 154 A + AR++ V ++ ++ Q + A E E L + R+ Sbjct: 700 AGEVDEARQVFEPVVERA----PEAAQVIAQQAWFDAQAGELEKAIEGYERALGRESRRD 755 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + V Y R G +A L P+ + + A + A+ Sbjct: 756 WLVEK-YQAQQRAGHSEAALETLKGWLQEHPEDAASRHLLGSAQINAGHEAEALDTYETV 814 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + R ++ + + A + D + A +++L + L+ Sbjct: 815 LE-----QRPNDVIALNNAAWLARETDNPRAREYARRAVELAPDQPAILDTLGVVLLEGG 869 Query: 275 KKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVE 326 A L++ ++++P P+ +A Y S T L E +++ E Sbjct: 870 DTESALETLQRAYRMSPQAPDIGFHLAQAYQA--SGETEQARALLTELLEAHEDFPE 924 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 88/275 (32%), Gaps = 23/275 (8%) Query: 89 YTGLMSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ A + + H L L + + A + E ++ Sbjct: 660 ARNLAALGETEQAVTALRQTLSIDSSHMSARMVLTRHLS-----LAGEVDEARQVFEPVV 714 Query: 148 QI-PATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P + + ++ + G+L A +AL W+ E Q A Sbjct: 715 ERAPEAAQV----IAQQAWFDAQAGELEKAIEGYERALGRESRRDWLVE-KYQAQQRAGH 769 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A+ L + E +R +L A+ + G + L+ N ++A Sbjct: 770 SEAALETLKGWLQEHPEDAASRHLLGSAQ----INAGHEAEALDTYETVLEQRPNDVIAL 825 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGKLKRALRLEEI 320 AA + R A + ++ P P I + L +T L+ R + Sbjct: 826 NNAAWLARETDNPR-AREYARRAVELAPDQPAILDTLGVVLLEGGDTESALETLQRAYRM 884 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++ + +++ G +QA A ++ Sbjct: 885 SPQAPDIGFHLAQAYQASGETEQARALLTELLEAH 919 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 48/343 (13%), Positives = 101/343 (29%), Gaps = 47/343 (13%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLE 144 AL + + N+ AR++ + ++ H + L L Q E + +E Sbjct: 520 ALNLSSLEVRQGNLETAREILEDLQERDPGHPTSAIRLATLHFQQGEMEAGKRWLQDAIE 579 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L + D +A+ KA + P+ V +V ++ Sbjct: 580 AHPDRIEPYLM----LARAQNQQEDHAAARSTLEKAREHHPNDTRVLGLLVDLQEREGDF 635 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A L + + A L ++ A G+ + ++L + + + A + Sbjct: 636 AGAAQTLG----HLAVLRPDAAELRFRQARNLAALGETEQAVTALRQTLSIDSSHMSARM 691 Query: 265 CAAKSLISQNKKRKAEVILE---------------KIWKVNPHPEIANIY----THLLSE 305 + L + +A + E + W E+ L E Sbjct: 692 VLTRHLSLAGEVDEARQVFEPVVERAPEAAQVIAQQAWFDAQAGELEKAIEGYERALGRE 751 Query: 306 NTVGKL--------------KRALRLEEINKESVE---SLVIVSKIALEMGSIDQAHAKA 348 + L L+ +E E S ++ + G +A Sbjct: 752 SRRDWLVEKYQAQQRAGHSEAALETLKGWLQEHPEDAASRHLLGSAQINAGHEAEALDTY 811 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 ++ P I L A + + + + + A+ PD Sbjct: 812 ETVLEQRPNDVIALNNAAWLARET-DNPRAREYARRAVELAPD 853 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 24/271 (8%) Query: 131 LAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS--P 185 + +Y A + LQ P R L + R A R+ +AL++ P Sbjct: 52 MDAGEYAAATIEYRNALQHNADPEIR--GRLGLAY--LRDQQPEPAVRHLQRALEMGADP 107 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + A + + L S AI + ++ R LL RSL GD A Sbjct: 108 NVYALPLARL-LFTLGG--SGAIAEIPEADALEGEDAAR----LLAYRSLAAYQAGDASA 160 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299 + ++ D+ + + +S +A + + + + PE + + Sbjct: 161 GSDYLEAAREVQDDLVEIQLARGYQAMSDGDAEQAMNMTDAALETD--PEFSPAWSLKGD 218 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + LK R E+ +++ + + +E+ D+A A AP Sbjct: 219 LERVQGDPEAALKAFSRAVELRPDAIAERLKRGLMHVELEQFDEARADGKFLKDGAPNHP 278 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 L + + + + + AL A Sbjct: 279 GGHFLLGLIEFETGEPLQARPHLEEALAASA 309 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 44/373 (11%), Positives = 92/373 (24%), Gaps = 85/373 (22%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 +GY+A+ + A M + + L+ + + A + Sbjct: 181 ARGYQAMSD-------GDAEQAMNMTDAALETDPEFSPAWS--LKGDLERVQGDPEAALK 231 Query: 142 KLEMMLQI--PATREFAVYSLY-------FESCRI------------------------- 167 +++ A E L E+ Sbjct: 232 AFSRAVELRPDAIAERLKRGLMHVELEQFDEARADGKFLKDGAPNHPGGHFLLGLIEFET 291 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ A+ + +AL S + + + WS+A L + A+ Sbjct: 292 GEPLQARPHLEEALAASANYRLAMPYLAAIQLEEGNWSQAERLLERHHALGPA----NAM 347 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKI 286 + ++G + E+L + I A A I + +L + Sbjct: 348 SYRLLAQLRIEQGRTQEARRILAEALSERPDLIEALGDQLAALYIGEGDTDSGIEVLREA 407 Query: 287 WKVNP-HPEIAN------------------------------------IYTHLLSENTVG 309 PE+ H+ E Sbjct: 408 LANRADRPELQEMLGIALVRHGDHEQGMALLHRVASESADVRLADYSVALAHIRDEQYEQ 467 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 L+ RL + + E+ + ++ L +G I +A + + P L + Sbjct: 468 ALEATQRLRDKDPENPQGFNLMGAALLGLGEIHEARLIYQEGLSLHPDNSTLALNLSSLE 527 Query: 370 ANSHNTDKILYWT 382 N + Sbjct: 528 VRQGNLETAREIL 540 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 91/330 (27%), Gaps = 45/330 (13%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREF 155 + ++ + H E YL+ + + + A LE + TR Sbjct: 565 GEMEAGKRWLQDAIEAHPDRIEP--YLMLARAQNQQEDHAAARSTLEKAREHHPNDTRVL 622 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L R GD A + + PDA + + E +A+T L Q Sbjct: 623 GL--LVDLQEREGDFAGAAQTLGHLAVLRPDAAELRFRQARNLAALGETEQAVTALRQTL 680 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 R +L SL G++ + ++ + A + Sbjct: 681 SIDSSHMSARMVLTRHLSL----AGEVDEARQVFEPVVERAPEAAQVIAQQAWFDAQAGE 736 Query: 276 KRKAEVILEKIWKVNPHPE-IANIY-THLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 KA E+ + + Y + ++ L+ + + E S ++ Sbjct: 737 LEKAIEGYERALGRESRRDWLVEKYQAQQRAGHSEAALETLKGWLQEHPEDAASRHLLGS 796 Query: 334 IALEMG---------------------------------SIDQAHAKAMLAMKIAPRKEI 360 + G +A A A+++AP + Sbjct: 797 AQINAGHEAEALDTYETVLEQRPNDVIALNNAAWLARETDNPRAREYARRAVELAPDQPA 856 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMP 390 L + +T+ L Q A P Sbjct: 857 ILDTLGVVLLEGGDTESALETLQRAYRMSP 886 >gi|290475309|ref|YP_003468197.1| hypothetical protein XBJ1_2298 [Xenorhabdus bovienii SS-2004] gi|289174630|emb|CBJ81424.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004] Length = 389 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 101/316 (31%), Gaps = 49/316 (15%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +++ R A+ L + G + A+ + +D + Sbjct: 83 GEVERAIRIHQSLMESASLTFEQRLLAIQQLGRDYMAAGVYDRAENMFIQLVDEADFCEN 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIAS--- 245 +++ Y +W++AI + K K R A +L+ + Sbjct: 143 AFNSLLSIYQSTSDWNKAIDVSEKLVKLGKHHFREEIAHFYCELALQYMGSDASTEAVGY 202 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 + A ++ K C SI + I+Q + KA +L++ I L+SE Sbjct: 203 LNKAAQADKNCAR---VSIMFGRIYIAQKEYTKAAELLKR---------ILEQDKQLVSE 250 Query: 306 NTVGKLKRALRLEEINKESVESLV---------IVSKIALE-----MGSIDQAHAKAMLA 351 + + L + E E+ V ++++ L D A Sbjct: 251 SLPMLEECYQNLSQ--PEEWEAFVQCCVEEKCGAIAELYLADIIEKKEGRDIAQNYINRQ 308 Query: 352 MKIAPRKEI-FLLL----AQIEQANSHNTDKILYWTQSALHAMP-DPLWISD-DGYLSSV 404 ++ P + + L+ A E+ + + +L + P + G+ S Sbjct: 309 LERHPTMRLFYRLMDYHLADAEEGRAKESLLLLR--NMVGEQIRTKPDYRCHKCGFTSRS 366 Query: 405 --WLPLSPISKTLCYF 418 W P ++ Sbjct: 367 LYWH--CPSCRSWDTI 380 >gi|147774593|emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera] Length = 1023 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 17/242 (7%) Query: 129 IALAERQYNIAHEKLEMMLQ-----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + E L+ +L+ P + E GD+ +A+ +A Sbjct: 654 AAQLE-KSHGTRESLDALLRKAVTYRPQAEVLWLMG-AKEKWLAGDVPAARAILQEAYAA 711 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P++ + A + E RA L + ++ ++ R L G+ Sbjct: 712 IPNSEEIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVEREL-----GNTG 766 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTH 301 E LKL + + + KA+ + K P P + +H Sbjct: 767 EERRLLGEGLKLFPSFFKLWLMLGQLEERFGNFEKAKEAYDSGLKHCPSCIP-LWLSLSH 825 Query: 302 LLSE-NTVGKLKRALRLEE-INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + N + K + L + N ++ E + + G+ +A A++ P Sbjct: 826 LEEKMNGLSKXRAVLTMARKKNPQNPELWLAAVRAESRHGNKKEADILMAKALQECPTSG 885 Query: 360 IF 361 I Sbjct: 886 IL 887 >gi|218672595|ref|ZP_03522264.1| TPR repeat-containing protein [Rhizobium etli GR56] Length = 374 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 80/246 (32%), Gaps = 11/246 (4%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAV 157 P A ++Q + L + ++A E ++ L A Sbjct: 95 PRAAIEIIKKAEQRYPDDPTLPAV-RAELAELTDDREQMKEAIDRSLSLDPDHPMALSAR 153 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + DL+ A +A+ ++P A ++ A + K Sbjct: 154 AG--YRATYESDLDGALADLNRAIALAPGASGTLNSLGLLQSSR----DANGEAEKAFKK 207 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A E + +L ++ D+ M + H+ ++ L + +A + + + ++ Sbjct: 208 AIELDPQDPLLHANLAILYLDQARMKEAKHEIDTAIALDPSFDLALLARGRYYLQAGERD 267 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIAL 336 KA L NP + +L L+ N+ + + ++ + A+ Sbjct: 268 KALADLLAASTANPAHSQSQFMLAAAHYEKGDRLPSEQALDNANRLDDDDPVISSFRTAI 327 Query: 337 EMGSID 342 ++ D Sbjct: 328 DIDDYD 333 >gi|254422478|ref|ZP_05036196.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] gi|196189967|gb|EDX84931.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] Length = 408 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 74/255 (29%), Gaps = 16/255 (6%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A + ++ I A L R+ + + A+ +A+ I+P Sbjct: 159 AHSLFMDEAFEQAADTYRELIDISPREADAYIGLGGALLRLEEYDDARSAYERAVAIAPG 218 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 EA+ Y+ + A++ L + + + NRA + + + + ++ Sbjct: 219 NAQAYEAIGLLYLTQGNYDAALSPLERARS----IDTNRASVHANLARIWLAQDNDSQAF 274 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LL 303 ++ L + + L + A E+ + NP A L Sbjct: 275 DSLQRAVALNPRDSDSQYFLGEILRKRGDINSALNHYEQAVEHNPRLLQAQAALGELLLE 334 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + + +L E + GS + A + + L Sbjct: 335 RQQYLRAVLAYRQLTRAFPEDAGVRYNLGLALWGQGSKNSALEEL---------QRSLQL 385 Query: 364 LAQIEQANSHNTDKI 378 E + Sbjct: 386 YRDQENGEGADRAAA 400 >gi|78223606|ref|YP_385353.1| tetratricopeptide TPR_4 [Geobacter metallireducens GS-15] gi|78194861|gb|ABB32628.1| Tetratricopeptide TPR_4 [Geobacter metallireducens GS-15] Length = 267 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 66/196 (33%), Gaps = 11/196 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD A + ++ PD + + + A+ + K A + Sbjct: 17 EAGDYTGAAAQFRECVEREPDNAEGYFYLGEALSEEGKLQDALKEYEKGLKLAPD----D 72 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L A + G + + L ++ A + S + +KA EK Sbjct: 73 LDALTAVGDIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNSLERTQKAIKAFEK 132 Query: 286 IWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +++P + + + L + + E++ + + + ++ ++G Sbjct: 133 ALEIDPANVFAYNGLGDAWYGLDEHEKA--IAAFQKGIELDPDDAAAHFNLGELYYDLGE 190 Query: 341 IDQAHAKAMLAMKIAP 356 D+A + + A+++ P Sbjct: 191 HDEAEHECLEAVRLDP 206 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 75/232 (32%), Gaps = 23/232 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y A + ++ + L G L A + K L ++PD Sbjct: 18 AGDYTGAAAQFRECVEREPDNAEGYFYLGEALSEEGKLQDALKEYEKGLKLAPDDLDALT 77 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 AV ++ A+ + A + + + A + I + ++ AI++ Sbjct: 78 AVGDIKFELGQYKEALAAYQRVV--ALDPDNSDAHVNIGLVYNSLERT------QKAIKA 129 Query: 253 LKLCDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLL 303 + A++ A + ++ KA +K +++P H + +Y L Sbjct: 130 FEKALEIDPANVFAYNGLGDAWYGLDEHEKAIAAFQKGIELDPDDAAAHFNLGELYYDLG 189 Query: 304 SENTVGKLKRALRLEEINKESVE--SLVIVSKIALEMGSIDQAHAKAMLAMK 353 + LE + + S + + + ++ + A L ++ Sbjct: 190 EHDEAEH----ECLEAVRLDPAFSMSYLTLGSLYMDNERVKDAIRYLELYLR 237 >gi|148264105|ref|YP_001230811.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146397605|gb|ABQ26238.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 573 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 15/169 (8%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + +VL ++ A++ L E + A L + + + ++KL Sbjct: 54 RIHVLEGDFDGALSLLQAAV----EADPKSAFLRKSIAQVYLQMNRFQDALESCQTAIKL 109 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HPEIANIYTHLLSENTV 308 + A I A L+ + ++A +K +++P H +A Y + Sbjct: 110 DPGFVEAQILAGNILVGLQRDKEAIPYYKKALEIDPSKEDIYLH--LAIAY--VKGFEYE 165 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L ++N +S + K +M A A+++ P Sbjct: 166 EAVNTLKVLLKVNPDSAIGYYYLGKTYDQMKLSKDAANYYKKAVELKPD 214 >gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif Length = 125 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 34/87 (39%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + Y+ A E + L++ A Y+L + GD + A Y KAL++ P+ Sbjct: 18 AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKK 215 + Y ++ AI + + Sbjct: 78 EAWYNLGNAYYKQGDYDEAIEYYQKAL 104 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 2/97 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + + + E L + Y+ A E + L++ A Sbjct: 23 GDYDEAIEYYQKALELDPNNAEAWYNL--GNAYYKQGDYDEAIEYYQKALELDPNNAEAW 80 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y+L + GD + A Y KAL++ P+ + + Sbjct: 81 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNL 117 >gi|149636068|ref|XP_001507659.1| PREDICTED: similar to PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Ornithorhynchus anatinus] Length = 1026 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 102/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 664 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 721 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 722 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 781 Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + + LK C +S + ++ Sbjct: 782 LCEEALKHYEDFPKLWMMKGQIEEQEELIEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 841 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P++ L + + A L +E S ++ Sbjct: 842 GQLTRARAILEKSRLKNPKNPDLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 899 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 900 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 957 Query: 391 D 391 D Sbjct: 958 D 958 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 373 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 429 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 430 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 481 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 482 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 534 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 535 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 580 >gi|282164280|ref|YP_003356665.1| hypothetical protein MCP_1610 [Methanocella paludicola SANAE] gi|282156594|dbj|BAI61682.1| hypothetical protein [Methanocella paludicola SANAE] Length = 388 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 84/252 (33%), Gaps = 24/252 (9%) Query: 116 FHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + + + + L + A R F + + + + Sbjct: 135 LPDHAVAHFKLAEAWLMTGNGDEASRELERAARFAPDDLDIRFF-LRHI---ARFNKAPD 190 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 + A A++ + + + + ++ + + + K A + R L +A Sbjct: 191 EVLKDARMAVEKNANDAGAHDRLGTLLLMMDDMKSGRAEVERAVKLAPDKEEYR--LDLA 248 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L + +G A+ + +L+L + A + + A + K+ P Sbjct: 249 YALSSFYEG---AALREVKAALRLAPRWLEAWLFLGAFYADLRRLGDAINAYRQALKIYP 305 Query: 292 -----HPEIANIYTHLLSENTVGKLKRAL--RLEEINKESVESLVIVSKIALEMGSIDQA 344 H + + Y + + R E+N ++ E+ +++ + L G D+A Sbjct: 306 DNDLLHYLLGDAYFKAFN----ARNARIEMETAVELNPDNYEARRVLAGLYLVQGLKDKA 361 Query: 345 HAKAMLAMKIAP 356 + + +++ P Sbjct: 362 IEQYEVLVEMEP 373 >gi|313680127|ref|YP_004057866.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus profundus DSM 14977] gi|313152842|gb|ADR36693.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus profundus DSM 14977] Length = 364 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 83/206 (40%), Gaps = 16/206 (7%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L ++ G+L+ A+ +AL I+PD V + Q Y+ + A+ L Q Sbjct: 155 RGLVYQYK--GELDKAEAAFKQALAIAPDDAVVRYNLAQVYLSQGKLDEALDMLAQ---- 208 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A L + A KG ++ + ++ +L + + + + K Sbjct: 209 GVALDPASAQLQLLYGKVLAVKGRLVEAEQALAKATELAPLNASTWLNLGQVYYLEKKFA 268 Query: 278 KAEVILEKIWKVNP--HPE----IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVI 330 +A L+K +++P PE + + ++ L +A++L ++ + Sbjct: 269 EAIDTLDKAIELDPLGFPEAYFYLGRSHLEAGHVDDARLNLTKAIKLA---PDNADYHYW 325 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 +++ + G D A + A+++AP Sbjct: 326 LARALIAAGENDAARTELERALELAP 351 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 53/312 (16%), Positives = 106/312 (33%), Gaps = 62/312 (19%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YLL + + +Y+ A L+ +A+Y L ++ +A +A+ Sbjct: 38 AYLLVGDVYYSSGEYDAAMIAFRRALEKEPNNVYALYGLGRTQLKMHQFTAAIENLKRAI 97 Query: 182 DI----SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSL 234 I +P + +A +Y+ A++ + A FL+Q + + R L Sbjct: 98 AIDGSYAPLYVALAQAYTDRYLYAEDKTAAEKFLDQALLILDDARTIDPNYHAIYNQRGL 157 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP- 293 KG++ + ++L + + + A+ +SQ K +A +L + ++P Sbjct: 158 VYQYKGELDKAEAAFKQALAIAPDDAVVRYNLAQVYLSQGKLDEALDMLAQGVALDPASA 217 Query: 294 EIANIYTHLLS-----ENTVGKLKRALRLEEINKES------------------------ 324 ++ +Y +L+ L +A L +N + Sbjct: 218 QLQLLYGKVLAVKGRLVEAEQALAKATELAPLNASTWLNLGQVYYLEKKFAEAIDTLDKA 277 Query: 325 --------VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 E+ + + LE G +D A A+K+AP + Sbjct: 278 IELDPLGFPEAYFYLGRSHLEAGHVDDARLNLTKAIKLAP-----------------DNA 320 Query: 377 KILYWTQSALHA 388 YW AL A Sbjct: 321 DYHYWLARALIA 332 >gi|83313118|ref|YP_423382.1| methyltransferase [Magnetospirillum magneticum AMB-1] gi|82947959|dbj|BAE52823.1| Predicted methyltransferase [Magnetospirillum magneticum AMB-1] Length = 540 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 90/269 (33%), Gaps = 6/269 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + A +++ A Y L + G A + T+A+ P Sbjct: 16 RAMAAWDDGNAAEARRLARSIVESKPDFGGAHYLLGLIALAQGQARRAAEHLTQAVAADP 75 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A+ + ++ AI L+ + ++E + A +A L + + Sbjct: 76 NQSVPRLALGRALEALDNYNSAI--LHYRAILSREPDHAEANARLAELLGRLGRNK-AEA 132 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 A ++K+ A L +A +LE+ ++ P +A L+ Sbjct: 133 LEHARRAVKVAPRHPEALCTLGTLLHQTGDHAEAARMLERSLEIRPDWAVALNNYGLVLG 192 Query: 306 NTVGKLKRALRL---EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + + L E+ ++ + ++ MG +D+A A A KI R Sbjct: 193 SLGQYERAVAVLSGAAELRRDHAGTRANLAAALRGMGRLDEARLHAERATKINSRDMAGW 252 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPD 391 L + + + + A+ A PD Sbjct: 253 LELGLVRKALGMPEAAAAAFERAVTAAPD 281 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 88/274 (32%), Gaps = 12/274 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+++A A + + N+ + L + A YN A +L Sbjct: 51 GLIALAQGQARRAAEHLTQAVAAD--PNQSVPRLALGRALEALDNYNSAILHYRAILSRE 108 Query: 151 ATREFAVYSLYFESCRIGDLNS-AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A L R+G + A +A +A+ ++P P + + + A Sbjct: 109 PDHAEANARLAELLGRLGRNKAEALEHARRAVKVAPRHPEALCTLGTLLHQTGDHAEAAR 168 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + + +W A+ L L G + + +L + A + Sbjct: 169 MLERSLEIRPDW----AVALNNYGLVLGSLGQYERAVAVLSGAAELRRDHAGTRANLAAA 224 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI----YTHLLSENTVGKLKRALRLEEINKESV 325 L + +A + E+ K+N ++A R +SV Sbjct: 225 LRGMGRLDEARLHAERATKIN-SRDMAGWLELGLVRKALGMPEAAAAAFERAVTAAPDSV 283 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + +++ L +G ++A +++ P Sbjct: 284 HAHYCLAEARLVLGEKNRAAKSFRRCLELDPEDR 317 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 63/169 (37%), Gaps = 8/169 (4%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R++ D G+ + A ++ + A ++Q + R+A L + Sbjct: 13 AFGRAMAAWDDGNAAEARRLARSIVESKPDFGGAHYLLGLIALAQGQARRAAEHLTQAVA 72 Query: 289 VNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG-SIDQA 344 +P+ P +A +N + + + E+ ++++ +G + +A Sbjct: 73 ADPNQSVPRLALGRALEALDNYNSAILHYRAILSREPDHAEANARLAELLGRLGRNKAEA 132 Query: 345 HAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A A+K+APR + + L + + + + + +L PD Sbjct: 133 LEHARRAVKVAPRHPEALCTLGTLL--HQTGDHAEAARMLERSLEIRPD 179 >gi|94266280|ref|ZP_01289985.1| TPR repeat:Response regulator receiver [delta proteobacterium MLMS-1] gi|93453131|gb|EAT03602.1| TPR repeat:Response regulator receiver [delta proteobacterium MLMS-1] Length = 393 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 63/205 (30%), Gaps = 11/205 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A E +Q + ++L + + + + A Y +A++ISP Sbjct: 193 GDIAKAQSCFEKAIQRNRLDVTSYHALGQIAFKRNNTDKAISYFARAMEISPRHTDRALQ 252 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + A L ++ N + + G + E + Sbjct: 253 FAKLLLKKNQTQEAEKVLKLVLRHK----VNDIDFKEQVAEQALAGGLYTLAVKALREVV 308 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTV 308 K + +L+ + + +LE P E+A Y + Sbjct: 309 KADPERSYLNKKIGTALVQVGEYNEGTRLLETAAAKTPQDVELLLELARAYMAMRMPIRA 368 Query: 309 GKLKRALRLEEINKESVESLVIVSK 333 K A + I+ E+ E+ I+ + Sbjct: 369 D--KWAATVIRIDPENAEAREILKE 391 >gi|218202567|gb|EEC84994.1| hypothetical protein OsI_32276 [Oryza sativa Indica Group] Length = 1173 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 25/233 (10%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKK 216 ++ + D +A++ + S EA++ + + A L K Sbjct: 3 RG-ASQAQQRKDAEAAEQLDRLMREASSPRKEAREALLLDRSRRHDEAIARVDELAAKHP 61 Query: 217 NAKEWNRNRAILL---IARSLENAD----KGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + +L +R++ D + + I++ +L N + ++ A + Sbjct: 62 ESAAVAHLAGLLHYHATSRAMAAKDRQGVEAHCNTARDFYIKAKRLAPNCVEIAVRLALA 121 Query: 270 LISQNKKRKAEVILEKIWKVNPHP-EIAN---IYTHLLS-ENTVGKLKRALRLEEINKES 324 + +AE +E+ P P + A Y + L ++ ++++A R+ + Sbjct: 122 RLRCFNDGEAEPEIERA-LAIPFPTDPAENNVAYDNALGTTSSRDRVEKARRVALARRPE 180 Query: 325 VESLVIV------SKIALEMGSIDQAHAKAMLAMKIA---PR-KEIFLLLAQI 367 + S V + L+ D A ++A P L+ A I Sbjct: 181 ILSYVRNRSIPGDVRAVLDYADSDGVAKAVKPAKEVALRYPYSARAHLIYAYI 233 >gi|154343499|ref|XP_001567695.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065027|emb|CAM43139.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 2412 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 77/239 (32%), Gaps = 11/239 (4%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--- 217 Y E C D S + + + + A++ + ++ A + +K+ Sbjct: 1105 YLERCAAEDAESHREASARVVTAFMRGAAARSALLSRAETMSSYNDARAMQEKDEKHVAM 1164 Query: 218 -AKEWNRNRAILLIAR-----SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + N A + E A+ + + A E+ + + A Sbjct: 1165 TTDDDNGEDTYAASAEVPGQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERA 1224 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 ++ R+AE + + P + + + +L+RA RL S + Sbjct: 1225 ELDRLRRAERLASEAPTSAPRRPL-TAEQLVTERAELDRLRRAERLASEAPTSAPRRPLT 1283 Query: 332 SK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 ++ +A E +D+ LA + L A+ A D++ + A A Sbjct: 1284 AEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAP 1342 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 81/258 (31%), Gaps = 15/258 (5%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + + ++P L E + L A+R A++A +P P Sbjct: 1164 MTTDDDNGEDTYAASAEVPGQ-------LAAERAELDRLRRAERLASEAPTSAPRRPLTA 1216 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 E + + RA A R + E A+ + + A E Sbjct: 1217 EQLAAERAELDRLRRAERL----ASEAPTSAPRRPLTAEQLVTERAELDRLRRAERLASE 1272 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK 310 + + + A ++ R+AE + + P P A +E + + Sbjct: 1273 APTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAE--LDR 1330 Query: 311 LKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 L+RA RL S + ++ +A E +D+ LA + L A+ Sbjct: 1331 LRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLA 1390 Query: 370 ANSHNTDKILYWTQSALH 387 A D++ + A Sbjct: 1391 AERAELDRLRRAERLASE 1408 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 72/232 (31%), Gaps = 10/232 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVS-QQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQ 148 G ++ + R+ S + L L + A +R E Sbjct: 1183 GQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTS 1242 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P A L E + L A+R A++A +P P E + + RA Sbjct: 1243 APRRPLTAEQ-LVTERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAELDRLRRAE 1301 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 A R + + E A+ + + A E+ + + A Sbjct: 1302 RL----ASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAA 1357 Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEE 319 ++ R+AE + + P P A +E + +L+RA RL Sbjct: 1358 ERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAE--LDRLRRAERLAS 1407 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 64/203 (31%), Gaps = 14/203 (6%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + + ++P L E + L A+R A++A +P P Sbjct: 1714 MTTDDDNGEDTYAASAEVPGQ-------LVTERAELDRLRRAERLASEAPTSAPRRPLTA 1766 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 E + + RA A R + + E A+ + + A E Sbjct: 1767 EQLAAERAELDRLRRAERL----ASEAPTSAPRRPLTAEQLAAERAELDRLRRAERLASE 1822 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310 + + + A ++ R+AE + + P P A +E + + Sbjct: 1823 APTSAPRRPLTAEQLAAERAELDRLRRAERLASEAPTSAPRRPLTAEQLAAERAE--LDR 1880 Query: 311 LKRALRLEEINKESVESLVIVSK 333 L+RA RL S + ++ Sbjct: 1881 LRRAERLASEAPTSAPRRPLTAE 1903 >gi|254446689|ref|ZP_05060164.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235] gi|198256114|gb|EDY80423.1| Tetratricopeptide repeat family [Verrucomicrobiae bacterium DG1235] Length = 1065 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 92/265 (34%), Gaps = 9/265 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 I A+K++ V + E L+ IA + + Y+ A L ML++ A Y Sbjct: 281 IEDAKKLNLEVLKLD--PMEPTALRLKGVIAASSKDYDAAISILTSMLELYPQDVKANYQ 338 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L A+ +P + + ++S AI L N Sbjct: 339 LALAYIANNQKTKAKAPLEFVGANAPGSIETAILLASLQSEEGDFSGAIITLRNLVANRP 398 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E + + +L A + + G+ A+ E +++ S + + + + +A Sbjct: 399 ESSEAKLLLAEAYNRQ----GNYDAALALYEEIDSQAESTPDISYLSGITQLRSRNRDEA 454 Query: 280 EVILEKIWKVNP-HPEIAN--IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 E K NP H + L + L+R ++ ++ VI ++I Sbjct: 455 RRAFESALKSNPLHLQSVEQLTALDLSERSYESALQRISDSLQLAPDTSILHVIKAQILN 514 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361 MG D+A A+++ I Sbjct: 515 AMGRRDEAEDSFKQAIELDSENRIA 539 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 70/218 (32%), Gaps = 7/218 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + L SA+ KAL+++P+ + + A L + + + Sbjct: 173 IKRQALTSAETRLNKALELNPEFGPAYSGKFTIAMSQGQLEAATEALEKAAEYTPKRTGI 232 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 RA + G + + I + A+ N+ A+ + Sbjct: 233 RAAYADHIAKRL---GKPDEALAYLEALNDEIPDFIPIATRLAELYAQANRIEDAKKLNL 289 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE---INKESVESLVIVSKIALEMGSI 341 ++ K++P A +++ ++ L + + V++ ++ + Sbjct: 290 EVLKLDPMEPTALRLKGVIAASSKDYDAAISILTSMLELYPQDVKANYQLALAYIANNQK 349 Query: 342 DQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 +A A AP E +LLA ++ + I Sbjct: 350 TKAKAPLEFVGANAPGSIETAILLASLQSEEGDFSGAI 387 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 105/280 (37%), Gaps = 17/280 (6%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESC-RIGDLNSAQRYATK 179 +L + E ++ A L + P + E + L E+ R G+ ++A + Sbjct: 369 TAILLASLQSEEGDFSGAIITLRNLVANRPESSEAKL--LLAEAYNRQGNYDAALALYEE 426 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + P ++ + ++ A K+ + + +L+ +++ Sbjct: 427 IDSQAESTPDISYLSGITQLRSRNRDEARRAFESALKSNPL---HLQSVEQLTALDLSER 483 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----PHPE 294 ++ +SL+L ++ + + A+ L + ++ +AE ++ +++ H Sbjct: 484 SYE-SALQRISDSLQLAPDTSILHVIKAQILNAMGRRDEAEDSFKQAIELDSENRIAHTL 542 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ Y L + L+ + E N E + +L ++ + + +A + + Sbjct: 543 LSRFYLSLNRTDEA--LEHLNIILENNPEDITTLTSLASLYEAERNYKEARESYGKILNL 600 Query: 355 APRKEIFL-LLAQIEQANSHNTDKILYWTQSALH-AMPDP 392 AP+ L LA + TDK L +SA A P Sbjct: 601 APQNLAALNNLAYLISIEDGPTDKALELAESARKVAPTSP 640 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 4/133 (3%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATK 179 L L + AER Y A E +L + A+ +L Y S G + A A Sbjct: 574 LTSL--ASLYEAERNYKEARESYGKILNLAPQNLAALNNLAYLISIEDGPTDKALELAES 631 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENAD 238 A ++P +P+ + + KE+ RA L + N + + +L D Sbjct: 632 ARKVAPTSPFTADTLGWILYQRKEFVRAKALLLDSLSRLTDNAEVNYHVGAASYALGEID 691 Query: 239 KGDMIASYHDAIE 251 A E Sbjct: 692 DAQRTLRVATAGE 704 >gi|197120108|ref|YP_002140535.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089468|gb|ACH40739.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 1005 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 58/218 (26%), Gaps = 35/218 (16%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 AE A +L +L G A+R +AL++ P Sbjct: 540 RANALRAEGDLAGAVALYRCLLARLPACAEIHNNLGLALQDQGLDPEAERSFRRALELKP 599 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D + V E A+ F + + ++ A + + L+ ++ + Sbjct: 600 DLADAQNNLGTLLVARGEHDEALPFFERALELRGDY--LPAYVNLGSCLQVLEE--PERA 655 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++ L A I + Y L+ Sbjct: 656 VELYRRAIALEPGFFKARI-----------------------------NLGTAYQDLMQP 686 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ L E+ E E+ ++ L +G Sbjct: 687 EKA--IETYRELLELAPEHPEAHWNLALSLLSVGDFKW 722 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 81/224 (36%), Gaps = 21/224 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 AL+E + +A + +L+ + L + R GDL A + ++A + P++ Sbjct: 10 ALSENRAELAQDICHDLLRAEPENVELLTLVGLL--AYRRGDLEEALQAFSRAAFLQPES 67 Query: 188 PWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + V V L A+ + E+ R L A G+ + Sbjct: 68 AELRNNVGVAYQDLDCH-DSAVLHFREALSLRGEYPEARCNLATA----LLHLGEAEEAI 122 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 + +++ A +L Q + A +K +++P AN+ T + Sbjct: 123 RNYCDAIAAAPGYADAYHLLGNALRRQGEWEGAVQCYQKALELDP----ANLKTLVNLGG 178 Query: 307 TVGKLKRA-------LRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ L R R I+ + V++ ++ + L G+ + Sbjct: 179 SLFTLNRFDEAIAAQRRALSIDPDHVDAHWNLALVLLTTGNYQE 222 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 59/203 (29%), Gaps = 42/203 (20%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ----------YNIAH 140 GL++ ++ A + S + L+ + A ++ A Sbjct: 41 GLLAYRRGDLEEALQAFSRAA------------FLQPESAELRNNVGVAYQDLDCHDSAV 88 Query: 141 EKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTE 192 ++ Y E+ +G+ A R A+ +P Sbjct: 89 LHFRE--------ALSLRGEYPEARCNLATALLHLGEAEEAIRNYCDAIAAAPGYADAYH 140 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + EW A+ + + + + ++ + SL ++ D + + Sbjct: 141 LLGNALRRQGEWEGAVQCYQKALE--LDPANLKTLVNLGGSLFTLNRFDEAIAAQ--RRA 196 Query: 253 LKLCDNSIMASICAAKSLISQNK 275 L + + + A A L++ Sbjct: 197 LSIDPDHVDAHWNLALVLLTTGN 219 >gi|308499240|ref|XP_003111806.1| CRE-LET-716 protein [Caenorhabditis remanei] gi|308239715|gb|EFO83667.1| CRE-LET-716 protein [Caenorhabditis remanei] Length = 1758 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 90/240 (37%), Gaps = 33/240 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALD-ISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQK 214 L+ E DL +A++ A +AL+ I+P + A + V + + + Sbjct: 1510 LFVEK---SDLTAARKTAEEALEAINPTESEELLKMWTAFLNMEVAYGDSTTVEKVFQRA 1566 Query: 215 KKNAKEWNRNRAILLIARSLE-NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 KNA + ++ + I + E NA+ ++ + KL A+ L++Q Sbjct: 1567 CKNANAYTIHKTLAKIHQKFEKNAEATQILEQMVKKFRANKLE-----VWTLLAEHLMTQ 1621 Query: 274 NKKRKAEVILEKIWKVNP----HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVE 326 ++ A +L + K P H ++ + + L + G+ L + + + Sbjct: 1622 KDQKAARDLLPRALKSAPNAQQHIQLISKFAQLEFKFGDAERGR-TLLEGLVTAHPKKTD 1680 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAM-------KIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++ + AL+ I+ A A K+ P + +L + ++ + + Sbjct: 1681 LWLVYADAALKHLGIEHARKILERACNLEMSVHKMRPLYKKWLEM----ESKHGDAAAVQ 1736 >gi|224008947|ref|XP_002293432.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970832|gb|EED89168.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 734 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 93/280 (33%), Gaps = 29/280 (10%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISP------ 185 + +A + E + T +VY L +G++ A+ + L + Sbjct: 307 QGNIAVAKQLYEDGVNANCTDASSVYHGLAKLHISLGEIEDARNVLQRGLSLFRPKGNSN 366 Query: 186 ------DAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + ++ + ++ A LNQ + R+ + LL+ ++L + Sbjct: 367 FVQRNENVAFLAHTLAMIELNCNNNA-KAAKEILNQGLWH----RRSSSPLLLGKALVES 421 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296 G+ + +++K + A + R A+ + E K P H + Sbjct: 422 RLGNEYGARDMFEQAIKADPDHAQAWQAFGVMEMRAGNYRSAKTLFECGLKNRPTHGALW 481 Query: 297 NIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y L E+ G + A L E V + + L G + A A+ Sbjct: 482 QAYGTL--ESRTGNMSNARLLFAAGIEKCPEHVPLYQAWACLELRDGDVITARRLIGEAL 539 Query: 353 KIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 R +L+ A+IE+ N + + + PD Sbjct: 540 TRDKRNGSGWLVAAKIEEKM-KNHGLVGLILRRGIECAPD 578 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 69/225 (30%), Gaps = 22/225 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+G+ A+ +A+ PD +A + A + A T KN Sbjct: 422 RLGNEYGARDMFEQAIKADPDHAQAWQAFGVMEMRAGNYRSAKTLFECGLKNRPT----H 477 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L A + G+M + ++ C + A + A ++ + Sbjct: 478 GALWQAYGTLESRTGNMSNARLLFAAGIEKCPEHVPLYQAWACLELRDGDVITARRLIGE 537 Query: 286 I----------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 W V A I + + VG + R E + E ++ Sbjct: 538 ALTRDKRNGSGWLVA-----AKIEEKMKNHGLVGLILRRG--IECAPDDTELYQALADHE 590 Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKIL 379 + G ID A ++I P ++ LA++E + Sbjct: 591 ISRGKIDSARELLEKGIEINPLHAPLYHSLAELEARVFNLEGLSR 635 >gi|332519513|ref|ZP_08395980.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix algicola 5H-3-7-4] gi|332045361|gb|EGI81554.1| Tetratricopeptide TPR_1 repeat-containing protein [Lacinutrix algicola 5H-3-7-4] Length = 455 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 87/231 (37%), Gaps = 33/231 (14%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPWVT 191 Y+ A L+ L+I + + L Y + G A + KA+ PD W Sbjct: 58 NYDKAVVALQKCLEIDDSESILYFELGKNYNKLKNFGAAEDALK---KAVSKDPDNEWYL 114 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----ARSLENADKGDMIASY 246 + + + Y K++ +AI + Q K ++ + A + + +L+ D+ D Sbjct: 115 DELYEAYAQQKDYDKAIKTVKQLVKFHPDYKEDLASIYVRTKDYKSALKVLDELDEELGI 174 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLL 303 D+ + L+ + + +K+ LE NP E +A I+ + Sbjct: 175 SDSRDRLRN------------QIYNATGRKKAQIRNLEDRVDKNPDAEKNYLALIFRYSE 222 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + + A +L EIN ES ++ L + +A A++ Sbjct: 223 NNDKEKAFETAKKLLEINP---ESQLV----HLALYKFYLDDNQAEKAIES 266 >gi|326931987|ref|XP_003212104.1| PREDICTED: pre-mRNA-processing factor 6-like [Meleagris gallopavo] Length = 994 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 104/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 632 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 689 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 690 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 749 Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + + LK C +SI + ++ Sbjct: 750 LCEEALKHYEDFPKLWMMKGQIEEQKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKV 809 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIV 331 + +A ILEK N P+ A+++ + LK + + +E S ++ Sbjct: 810 GQLTRARAILEKSRLKN--PKNADLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 867 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 868 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 925 Query: 391 D 391 D Sbjct: 926 D 926 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 341 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 397 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 398 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 449 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 450 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 502 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 503 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 548 >gi|326503324|dbj|BAJ99287.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 941 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 21/227 (9%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A+ +P A + A + ++A + + ++ A Sbjct: 284 GDRKKAEMLMENITTTNPSHAPGWIARARLLESAGKLAQARKVI----ADGCKYCPRSAE 339 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + + N D + +++ S+ AA + +KR + K Sbjct: 340 VWLEAARLN---PDPTVAKALLAQAVSHLPESVPLWTAAANLETDRQRKR---RVYRKAL 393 Query: 288 KVNPH-PEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + P+ P + L E+ LKRA E + E + ++K+ + + A Sbjct: 394 EHIPNSPMLWRAAVELEEPEDARVMLKRA---VECVPHNTEMWLALAKL----ETYENAK 446 Query: 346 AKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + P K I++ AQ+E+A + N + + ++ + D Sbjct: 447 KVLNKARETIPTDKAIWITAAQLEEA-NGNESLVRKVIKKSVKTLAD 492 Score = 43.4 bits (101), Expect = 0.088, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 21/276 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG----DLNSAQRYATK 179 L+ + + A L+ + +Y + ++ + A+ K Sbjct: 608 LMAAKEKWLQGNIQDARRI----LEEASGSIQGSEQIYLAAVKLEKENDEFERARSLLQK 663 Query: 180 ALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A + A W+ A++++ + + E R L++ + ++++ L + R + Sbjct: 664 ARKNASTARVWMKSALLEREIGSTE--RERELLDEALQQFNKFDK----LWMMRGQHSER 717 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP-HPEIA 296 G + + L C NSI +C ++ Q KA +LEK NP E+ Sbjct: 718 AGRPDEARTTYQQGLAQCKNSIPLWLCLSRLEEKQPGGASKARAVLEKARLTNPKQQELW 777 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM-KIA 355 H+ EN G K A+ L + + + +A+++ + Q A+++ A+ + Sbjct: 778 LESIHV--ENRAGNKKMAMTLLAKALQECSTSGKLWALAIDLENTPQKKARSVDALARCG 835 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + L ++ +K W ++ Sbjct: 836 HDPFVLVALGKLFWGQRK-IEKARTWFNRSVTEPNG 870 >gi|110760723|ref|XP_623820.2| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 2 [Apis mellifera] Length = 1095 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 156 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 213 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L G++ A + K Sbjct: 214 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 265 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 266 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 321 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + +++L N A A +L + + +AE ++ P H + N Sbjct: 322 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNN 381 Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E +L LE E + ++ + + G +++A A++I Sbjct: 382 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 439 Query: 355 APR 357 P Sbjct: 440 QPT 442 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 356 GQVVEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 412 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 413 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 472 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 473 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 522 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 83/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 291 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 350 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + + A L + ++G + + +++L++ Sbjct: 351 ALKEKGQVVEAEDCYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 406 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 407 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 464 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 465 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 510 >gi|330993284|ref|ZP_08317220.1| Cellulose synthase 1 operon protein C [Gluconacetobacter sp. SXCC-1] gi|329759686|gb|EGG76194.1| Cellulose synthase 1 operon protein C [Gluconacetobacter sp. SXCC-1] Length = 1324 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 89/288 (30%), Gaps = 24/288 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--E 154 + A + + V + L+ L ++ +A+ + A + L + AT+ E Sbjct: 419 TGQMGAAEQEYQSVLARDPNSQLALMGL--ARVEMAQGKTAEARQLLSRVGSQYATQVGE 476 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 V L + + D +A+ +P PWV + + + A + Sbjct: 477 IEVTGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDMAEANRVMQPI 536 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS-ICAAKSLIS 272 N +A +L N + + L + A A + I Sbjct: 537 LSNPVTAQDRQAGILFTYGSGNDAMTRRLLA--------GLSPEDYSPAIHAIATEMEIK 588 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 Q+ + ++ NP P I + + T + L + + + + + Sbjct: 589 QDLASRLSMV------ANPVPLIREALSP--PDPTGARGVAVADLFRQRGDMIHARMALR 640 Query: 333 KIALEMGSI--DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + DQ A A MKI+ LLA + + Sbjct: 641 IASTRTLDLSADQRLAYATEYMKISNPVAAARLLAPLGDGSGTGAGNA 688 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 78/270 (28%), Gaps = 69/270 (25%) Query: 133 ERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A + + LQI L S R GD A+RY +A+ P Sbjct: 305 AGRIAAAEQSFQSALQINSHDADSLGGMGLV--SMRQGDAAEARRYFQEAMAADPKTADR 362 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + ++ +++ L+ A + A + + Sbjct: 363 WRPALAGMEISGDYAAVRQ------------------LIAAHQYDAAKQRLSALARQSG- 403 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 A++ A + + A E+ ++ Sbjct: 404 -------QFTGATLMLADLQRTTGQMGAA----EQEYQS--------------------- 431 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK----EIFLLLAQ 366 L + S +L+ ++++ + G +A + E+ L+A Sbjct: 432 -----VLAR-DPNSQLALMGLARVEMAQGKTAEARQLLSRVGSQYATQVGEIEVTGLMAA 485 Query: 367 IEQANSHNTDKILYWTQSAL-HAMPDPLWI 395 + + ++ + + + A+ A DP W+ Sbjct: 486 --ASQTSDSARKVSILREAMAQAPRDP-WV 512 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 114/352 (32%), Gaps = 57/352 (16%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 TGLM+ A+ ARK+ + V + + A+ ++ +L Sbjct: 480 TGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDMAEANRVMQPILSN 539 Query: 150 PAT---REFAV---YSLYFESCRI--------GDLNSAQR-YATKA-------------- 180 P T R+ + Y ++ D + A AT+ Sbjct: 540 PVTAQDRQAGILFTYGSGNDAMTRRLLAGLSPEDYSPAIHAIATEMEIKQDLASRLSMVA 599 Query: 181 -------LDISPDAPWVTE--AVVQQYVLAKEWSRAITFL------------NQKKKNAK 219 +SP P AV + + A L +Q+ A Sbjct: 600 NPVPLIREALSPPDPTGARGVAVADLFRQRGDMIHARMALRIASTRTLDLSADQRLAYAT 659 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIM-ASICAAKSLISQNKKR 277 E+ + + AR L G + + + E ++ M ++ + L + + Sbjct: 660 EYMKISNPVAAARLLAPLGDGSGTGAGNALLPEQVQTLQQLRMGIAVAQSDLLNQRGDQA 719 Query: 278 KAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +A L + +P P++A + + L+ L + N + +++ + Sbjct: 720 QAYDHLAPALQADPEATSPKLALARLYNGQGKSGKALEIDLAVLRHNPQDLDARQAAVQA 779 Query: 335 ALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 A+ G A AM ++ +P +L +A +QA+ H I + A Sbjct: 780 AVNSGRKSLATRLAMDGVQESPMDARAWLAMAVADQADGHGHRTISD-LRRA 830 >gi|300870179|ref|YP_003785050.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687878|gb|ADK30549.1| TPR domain protein [Brachyspira pilosicoli 95/1000] Length = 631 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 97/297 (32%), Gaps = 40/297 (13%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 N +A+ + + H+ L L I L + N A + + + + A Y Sbjct: 66 NYTMAQTLIDDAYRYHSKDYRVLERKLT--IELLNNKNNEARTTINQIKALDSKNYLANY 123 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + S R+G +A +A+ I+ T A+ + + + A+ N KN Sbjct: 124 AEGVLSERVGYYKTAMSLYERAMIINRTRSEATVALAYLKLANGDRNAALDLFNLNVKNN 183 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 A + G+ AS ++ +L N A I A ++ ++ Sbjct: 184 P----RMAESYYNLANYYYITGNYNASLNEIKNALYYYTNYNDAKILQANVYMALDRYND 239 Query: 279 AEVILE-----------KIW-------KVNPHPEIANI---YTHLLSENTVGKLKRALRL 317 A ILE K + + N P N Y + E+ +G+L L Sbjct: 240 AIAILEYLPESSFRDDTKNYYIGNVYERANNFPSAKNAYINYLRVKPEDELGRLAYERVL 299 Query: 318 EEINKESVESLVIVSKIAL----------EMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 N ++ + AL + ++ A +K+ P L+ Sbjct: 300 FNTNPQADYERD---RAALYYANKASYYTRLADKVRSQAYLKHMLKLNPANTYARLM 353 >gi|20090471|ref|NP_616546.1| TPR domain-containing protein [Methanosarcina acetivorans C2A] gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A] Length = 1885 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 49/299 (16%), Positives = 89/299 (29%), Gaps = 36/299 (12%) Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALA 132 + YD+ +A LM +A+ S + + E + Q L Sbjct: 1413 FSQERYDEALEAFEQALMESP---YEVAKIEESEIEKSKISDPELEDAWTKIGLAQ--LK 1467 Query: 133 ERQYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISP 185 R+Y A + E +L+ T + L A KAL+++P Sbjct: 1468 TRRYEDAFDTFEKILEKNPTDADVWYLSGLVMRGL-------DQNEEAVEVFEKALELNP 1520 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 E + + A E +L +R++ + D + Sbjct: 1521 ALTAALEQKGLGLLALCRYEEARDAFGSALALNPE----NVDILYSRAVASYKLLDFEEA 1576 Query: 246 YHDAIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IAN 297 D L A + I +A L+ + + P H + +A Sbjct: 1577 SKDLERLLLFAPGFPDYTKACYMLGIASIELQDYERALQALDLVLEREPAHRDALYNMAL 1636 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +L + +L E + E ESL + LE+ + +A A P Sbjct: 1637 VLFNLEEYEEAART--FEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNP 1693 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 17/195 (8%) Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + V K + +AI N+ K+ + A+ +L + + Sbjct: 7 EAFQRGLDL-VKRKRYEKAINTFNKIL--DKDPDHKEALFHRGLAL--LETEKTQEALDS 61 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA----NIYTHLL 303 ++L+L + A + + +A E + +P PEI + + Sbjct: 62 FNDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAFAEM- 120 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-- 361 E + + E+ E + + +A + ++A A++I+PR Sbjct: 121 -ERAEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWY 179 Query: 362 ---LLLAQIEQANSH 373 L+LA+IE+ + Sbjct: 180 AKGLILAKIEKYENA 194 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 11/156 (7%) Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292 L + + E LK + A SL+ + A LEK+ ++P + Sbjct: 557 LLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDY 616 Query: 293 PEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P++A + L+ +L N E +E K+A+E+G + A Sbjct: 617 PDLAYSLGVALMELGELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEK 676 Query: 351 AMKIAPRKE--------IFLLLAQIEQANSHNTDKI 378 + P L + + E A + I Sbjct: 677 VLLEKPGSREAWYRKGLALLNMERFEDAVKAFDEVI 712 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 88/277 (31%), Gaps = 25/277 (9%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148 G+ SI + A + V ++ H + L + + +Y A E +L+ Sbjct: 1601 GIASIELQDYERALQALDLVLEREPAHRDALYNM--ALVLFNLEEYEEAARTFEQLLEAS 1658 Query: 149 --IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW----VTEAVVQQYVLAK 202 P + L + DL A + KA +P +++ + Sbjct: 1659 PEDPES--LNYLGLCL--LELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQ- 1713 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 ++ + ++ + + E A+ + + + LK N+I A Sbjct: 1714 ---ESLGYFDRILEISPE--NYDAMNYKGVAFCMLE--QYREALKSFDNVLKKDPNNIKA 1766 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-H-PEIANIYTHL-LSENTVGKLKRALRLEE 319 Q A ++ +NP H P + + L + + LK +L Sbjct: 1767 VYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLR 1826 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 I + +++ + ++ +A + I P Sbjct: 1827 IKPQDPQAMNYRGVLLGKLEKYGEAIKAFDEVLSIYP 1863 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 63/230 (27%), Gaps = 41/230 (17%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + A +AL+ISP A +++ A+ + + Sbjct: 151 AGKAERYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALECFDFLIREKP---- 206 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L + L A+ G + + LK + A L ++ AE + Sbjct: 207 KDTAALEQKCLILANLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTI 266 Query: 284 EKIWKVNP-HPEIA-----------------NIYTHLLSENTV----------------- 308 K+ K+NP H E + + + Sbjct: 267 SKVLKLNPGHREAWFRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEV 326 Query: 309 --GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L+ + E + E + L++ + +A ++ P Sbjct: 327 YEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDP 376 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 1/120 (0%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A +Y A E +L+ A+Y+ R+G +A Y K + +SPD P + Sbjct: 560 FASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDL 619 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ + E +A+ K + ++E + + ++ + Sbjct: 620 AYSLGVALMELGELEKALETFE-KLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVL 678 >gi|197102526|ref|NP_001127296.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Pongo abelii] gi|55727502|emb|CAH90506.1| hypothetical protein [Pongo abelii] Length = 471 Score = 53.8 bits (128), Expect = 6e-05, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 164 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 165 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 219 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 220 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 275 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 276 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 335 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 336 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 393 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 52/176 (29%), Gaps = 6/176 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 300 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 359 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 360 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 415 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 ++++ A A +A K+ P+ + Y +L Sbjct: 416 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNL 469 Score = 37.2 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 74/224 (33%), Gaps = 28/224 (12%) Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAV--VQQYVLAK 202 P R + L + R GD +A+R+ + PD V + + Sbjct: 12 TEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRL 71 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S + L K+ N A ++G + + +L+L + I Sbjct: 72 DGSAHFSTLAIKQ------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDG 125 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 I A +L++ A + N P++ + + + LK RLEE Sbjct: 126 YINLAAALVAAGDMEGAVQAYVSALQYN--PDL-----YCVRSDLGNLLKALGRLEEAKA 178 Query: 323 ---ESVESL--VIVSKIAL-----EMGSIDQAHAKAMLAMKIAP 356 +++E+ V+ L G I A A+ + P Sbjct: 179 CYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDP 222 >gi|261821898|ref|YP_003260004.1| tetratricopeptide repeat protein [Pectobacterium wasabiae WPP163] gi|261605911|gb|ACX88397.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium wasabiae WPP163] Length = 389 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 77/248 (31%), Gaps = 25/248 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + + + R AV L + G + A+ + S Sbjct: 83 GEVDRAIRIHQALTESASLTFEQRLLAVQQLGRDYMVAGLYDRAEEIFNQLVDEEDFRRS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++Q + +W AI + K K+ R A +L D+ Sbjct: 143 -----ALQQLLQIHQATSDWQTAIDVAEKLVKMGKDQLRVDIAHFYCELALLAMGSDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIAN 297 + + ASI + ++Q +A L K P + Sbjct: 198 KALTLLKKGATADKQCARASIMMGRIYMAQQDHSRAVEALRQVLDQDKELVSETLPMLQE 257 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y HL + + R E N + + ++++ I + + A A ++ P Sbjct: 258 CYQHL--DKLLDWANFLKRCVEENTGAT-AELMLADILEKEEGAEVAQAYINRQLQRHPT 314 Query: 358 KEIF-LLL 364 +F L+ Sbjct: 315 MRVFHRLM 322 >gi|88704018|ref|ZP_01101733.1| TPR domain protein [Congregibacter litoralis KT71] gi|88701845|gb|EAQ98949.1| TPR domain protein [Congregibacter litoralis KT71] Length = 928 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 83/263 (31%), Gaps = 47/263 (17%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +A+ I LAR+ + + ++ + AL + + A E E +L Sbjct: 448 LASDRIDLAREAVAGYQSESPDDTRPQIF--AARFALQTGERDKAREIFESVLVKEPGNI 505 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A L + +++ A+++ L+ P + ++ L ++ Sbjct: 506 NANGGLAIMALNERNIDEARQHFYSILEFHPTNV---QTLMNLATLEEQ----------- 551 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 G+ A ++ ++ + A+ I Q Sbjct: 552 ------------------------AGNTDAMLDALNRAMSADPQALPPRLALARYEIIQE 587 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 RKAE +L+ + + + H +A + T + ++ + SL Sbjct: 588 NPRKAEALLDTVREHHTNSFELHQLLAAAFMASRQ--TTQAVTSGRQMLRLRPNDPASLA 645 Query: 330 IVSKIALEMGSIDQAHAKAMLAM 352 V+++ G + A A + Sbjct: 646 YVARLEQNDGQLGAAREHAERVL 668 Score = 36.5 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 91/298 (30%), Gaps = 43/298 (14%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 N+ A + + + + L + L +LQ+ A+ Sbjct: 315 GNLATAERQLIKLVAEQPSNVPA--RLQLASVYLQRNDALATERVAREILQLEEKNIAAM 372 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216 L G+ +++ + + PD+ + +L + + I L + Sbjct: 373 RLLALALVAQGEYVESEQLYQQLATLKPDSVEDRTGLGATQLLLGDTASGIVELEKALAM 432 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + K ++ + + D + + I AA+ + ++ Sbjct: 433 DPKNAQLRERLIGAYLASDRID-----LAREAVAGYQSESPDDTRPQIFAARFALQTGER 487 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 KA I E + P ++ + ++ +AL Sbjct: 488 DKAREIFESVLVKEP-------------------------------GNINANGGLAIMAL 516 Query: 337 EMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +ID+A ++ P + + LA +E+ + NTD +L A+ A DP Sbjct: 517 NERNIDEARQHFYSILEFHPTNVQTLMNLATLEE-QAGNTDAMLDALNRAMSA--DPQ 571 >gi|315187290|gb|EFU21046.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 918 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 33/238 (13%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G L G++++ A++ S + E L L I E + A E Sbjct: 46 GVHLLS-GMIALRQDRNEEAKEAFSKALELGGEEAEALNNL--GVIYRKEGDHRKAIEYF 102 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L R +Y+L G A+ KAL+ P + Y Sbjct: 103 RKALAADPDRPDILYNLANACKDAGLFEEAEAAYRKALEHDPHLVSAYNNLATLYQQRGA 162 Query: 204 WSRAITFLNQKKKNAKE-----------------WNRNRAILLIARSLEN---------- 236 +A+ L + + + RA L A Sbjct: 163 LGKAVAVLEKGLTADPDHPTLLYNLGVLYQREGRYEEARASLHRALQKRPGWVEALNNLG 222 Query: 237 ---ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +G A+ E+L L A+ L + R+A + ++ P Sbjct: 223 IVEQSRGHHEAALACFREALTLDPLHAAAANNMGSILALLGRYREAFDWFVQALRIQP 280 >gi|149920119|ref|ZP_01908592.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] gi|149819062|gb|EDM78499.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] Length = 1773 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 29/273 (10%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL ++ + A E L L+ P R + ++ + G L+ A+ + Sbjct: 883 LLIARLRE-AGEDERAEELLRERLEQAADGPEERAEMLVTMARMREQAGALDEAEARVRE 941 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL++ + + + A+ L + + + + L A Sbjct: 942 ALELHDGSSAGWALLRDILEQRERPLEALEALVRAAQTSTDPGEKVRGLFAAAKKWATAL 1001 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + E + L + A+ + L+ + +A PH E Sbjct: 1002 SKPERALPLLRELVALDPHHEEATALFTELLVDRGDLGEAL----------PHAERWVTQ 1051 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 N RA L + AL D+A +A + PR Sbjct: 1052 LRAGDPNNREANARAHALA-------------GRCALAAHDKDKARELLRVAKEFDPRNR 1098 Query: 360 -IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + LA +E + + + + A+ A Sbjct: 1099 EVARALADLELESENWDAALKAYQGLAMQASQG 1131 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 3/123 (2%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKE 220 + D + A+ A + P V A+ + ++ W A+ L + + Sbjct: 1074 ALAAHDKDKARELLRVAKEFDPRNREVARALADLELESENWDAALKAYQGLAMQASQGEG 1133 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R +A L + L G++ ++ +L L A+ + + K+ +A+ Sbjct: 1134 EVRTQAELYLRMGLARRGLGELAKAHQMIDRALDLDPGFGDAARLLVELADAPAKQVEAQ 1193 Query: 281 VIL 283 L Sbjct: 1194 KRL 1196 >gi|125606531|gb|EAZ45567.1| hypothetical protein OsJ_30228 [Oryza sativa Japonica Group] Length = 1243 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 63/177 (35%), Gaps = 15/177 (8%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKK 216 ++ + D +A++ + S EA++ + + A L K Sbjct: 3 RG-ASQAQQRKDAEAAEQLDRLMREASSPRKEAREALLLDRSRRHDEAIARVDELAAKHP 61 Query: 217 NAKEWNRNRAILL---IARSLENAD----KGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + +L +R++ D + + I++ +L N + ++ A + Sbjct: 62 ESAAVAHLAGLLHYHATSRAMAAKDRQGVEAHCNTARDFYIKAKRLAPNCVEIAVRLALA 121 Query: 270 LISQNKKRKAEVILEKIWKVNPHP-EIAN---IYTHLLS-ENTVGKLKRALRLEEIN 321 + +AE +E+ P P + A Y + L ++ ++++A R+ Sbjct: 122 RLRCFNDGEAEPEIERA-LAIPFPTDPAENNVAYDNALGTTSSRDRVEKARRVALAR 177 >gi|311694783|gb|ADP97656.1| TPR repeat protein [marine bacterium HP15] Length = 891 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 86/233 (36%), Gaps = 11/233 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 G+ A +A++ PD +V + + S + L++ E Sbjct: 373 IDKGERREAYATLARAIEARPDDTELLAMHGMVALSLEDTK-SEGVASLSRALSLNPENV 431 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK---RKA 279 R R L +G + + + + + LI + + R+ Sbjct: 432 RLRLALANYY----EGQGMPEQALGQLRIAFANKPDDWPTTAAYVRLLIREGQTGELREL 487 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + LE + N ++ + + +T +K+ L + N ES+E + ++++ E G Sbjct: 488 QQSLENGYPENRSAQLLAAISLAGTGDTEEAIKKLEGLRDTNPESIEVNITLAQLYQEAG 547 Query: 340 SIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +A ++ A + P+ + A++ AN N + WT+S A P+ Sbjct: 548 QPAKAVNSFVAAAKQTEPKLPLLFRAARLHAANHQNESAVEDWTKSVSQAEPE 600 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 100/292 (34%), Gaps = 21/292 (7%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCR-IGDL 170 + L + + + ++ A E L L T E + + R GD Sbjct: 110 RLDQQPGEIALPLAESYIGQGKHLSARETLA--LADLETPEEKGRGAVVQGGALRLAGDY 167 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +A KAL T +++ Y+ +A++ + E + ++L Sbjct: 168 QAAIEQFEKALAEGWQVEKATAGILKTYLHLNNPQKAVSEADSYLAEYPESS--EVLMLK 225 Query: 231 ARSLENADKGDM-IASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAE---VI 282 R+L ++ + + + A+ +L D + ++ L Q + +A+ + Sbjct: 226 GRALYTLNRLEPAVEALTAAVGALPNSDFFLPVRRQTLTLLSRVLTEQGRVTEAQVYNRV 285 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 L + + + + + + + L ++N ++ + + + L+ G + Sbjct: 286 LAENTDSDLENQAKSAISAIKEGRFDEASETLQDLLQLNPDNERIALTLGALNLQQGRLQ 345 Query: 343 QAHAKAML--AMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + +P + I +A+I++ A+ A PD Sbjct: 346 EGLDLLSQNIDPETSPTRFIRLTTMARIDKGERREAYAT---LARAIEARPD 394 >gi|160900453|ref|YP_001566035.1| type IV pilus biogenesis/stability protein PilW [Delftia acidovorans SPH-1] gi|160366037|gb|ABX37650.1| type IV pilus biogenesis/stability protein PilW [Delftia acidovorans SPH-1] Length = 295 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 83/240 (34%), Gaps = 8/240 (3%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATRE 154 + N + + + L + ++A E + + P++ Sbjct: 53 GSGNASSVSNASMASAAEADPRRRASIRLELAASYFQAGRIDVALEEVNQALAADPSS-- 110 Query: 155 FAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 Y L R D + A KA+ + P + K++++A +L++ Sbjct: 111 ADGYGLLALIYMRNQDWDQADASLRKAMSLRPQDGDLQHNYGWLLCQRKQYAQAQEWLDK 170 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 R + + A+ L G + + ++ +L + + + + ++ Sbjct: 171 ALAQPGYLERPKTWM--AKGLCLQQAGLLAEAQQALLKGYELDPANPVIAYHLSNVMLQG 228 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVS 332 ++A+ + ++ +P +++ + E + + +L ++++ ES ++ Sbjct: 229 GDAKRAQFYIRRL-NSSPQSNAESLWLGIKIERALQQSAAMRQLADQLHQRFPESRQWLA 287 >gi|149192370|ref|ZP_01870572.1| hypothetical protein VSAK1_00010 [Vibrio shilonii AK1] gi|148833789|gb|EDL50824.1| hypothetical protein VSAK1_00010 [Vibrio shilonii AK1] Length = 389 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 92/287 (32%), Gaps = 51/287 (17%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFVQLVDEPEHREA 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ ++ Y EW +AI + + Sbjct: 143 AL----------------------------------TQLLAIYQQTSEWHKAIEYATALQ 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K K+ +N A ++ G+ + + ++L + ASI K + Sbjct: 169 KMGKKRVKNSIAHFWCELAMIEKADGNTNKAIQNFKKALAVDPRCARASISLGKLYLEDE 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 K LE + + P +A Y HL E + + RA +E+ S E Sbjct: 229 DYAKTVSYLESVLEQDKDFISEVLPTLAECYHHLGQEQGLVEFLRA-SIEKGAGVSAE-- 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370 ++++++ + A A + +P + L+ A E+ Sbjct: 286 LMLAQLVANHEGTEAAQALLTRQLVRSPTMKGFYRLMDYHLANAEEG 332 >gi|307111439|gb|EFN59673.1| hypothetical protein CHLNCDRAFT_133184 [Chlorella variabilis] Length = 1558 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 6/154 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G L+ A+ +AL P V +A + A L + + + Sbjct: 1373 GHLSRARPLFQQALRQEPSNTHVLQAWGVAEARHGDAGEARRLL----RRCTDADPECRA 1428 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 A + + GD+ A+ L+L S+ A + + + A +L++ Sbjct: 1429 AWHAWARLEEEAGDVGAARQLYRTVLRLRPGSVPALSALGRLERRAGQMQAAHQLLQEAL 1488 Query: 288 KVNPH--PEIANIYTHLLSENTVGKLKRALRLEE 319 +PH P +A + L ++ + +R + Sbjct: 1489 AADPHHAPSVAEMAALLEAQGKPAQAQRMSKRVR 1522 >gi|115452075|ref|NP_001049638.1| Os03g0263900 [Oryza sativa Japonica Group] gi|108707321|gb|ABF95116.1| calcium-binding EF hand family protein, putative, expressed [Oryza sativa Japonica Group] gi|113548109|dbj|BAF11552.1| Os03g0263900 [Oryza sativa Japonica Group] Length = 848 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 15/224 (6%) Query: 173 AQRYATKALDISPD----APWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A +A ++ P + + ++ AKE + L + + Sbjct: 293 ALSSFRRACELQPTDVRPHFRAGNCLYALGRHSEAKE--EYLLALEAAEAGGSQSADILP 350 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + +G ++ + E+ LC + A +L + R AE LE+ Sbjct: 351 QIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEA 410 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H ++ + H + ++ ++ + ++ V++L + + ++ G Sbjct: 411 IFLKPDYADAHCDLGSA-LHAIGDDDRA-VQEFQKAIDLKPGHVDALYNLGGLNMDAGRF 468 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +A + I P L + +++ + A Sbjct: 469 VRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 512 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 9/165 (5%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--MLQIP 150 +++ A + L H + + + LL +Y A + LE L+ Sbjct: 358 IAMEAEGMVLGACEHYREAAILCPSHARALKLLGS-ALFGVGEYRAAEKALEEAIFLKPD 416 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + GD + A + KA+D+ P + + A + RA Sbjct: 417 YADAHCDLGSALHAI--GDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEM 474 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + N RA L +++ +G+ + E+ K+ Sbjct: 475 YTRVLSIRP--NHWRAQL--NKAVALLGQGESEEAKKALKEAFKM 515 >gi|303276779|ref|XP_003057683.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545] gi|226460340|gb|EEH57634.1| PAF1 complex protein Ctr9 [Micromonas pusilla CCMP1545] Length = 782 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 88/271 (32%), Gaps = 15/271 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + + + V L + + A E +Q+ T A Sbjct: 184 GQFAEALQWYRRALRSQGAAAPAGVRLGIGACQYQL-GNFEGARLAFERTIQLEPTNVDA 242 Query: 157 VYSLYFESCRIGDLNSA----QRYATKALDISPDAPWVTEAVVQQYVLAKEWS-RAITFL 211 + L + + +A +A + P P + + ++ A + + +AI L Sbjct: 243 LVGLASLADAKTNYVAAVKRGLELLERAFTLDPHHPGAQVELAKHFLYAGDDNLQAIEQL 302 Query: 212 NQKKKNAKE-----WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + R RA + R+ + +G++ + + ++ + + Sbjct: 303 TETLIRGGADAIGSTPRLRAQAAMTRAKAHHSRGELQRAQGLYQAAAQMDETFHEPNFGL 362 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLS--ENTVGKLKRALRLEEINKE 323 A+ +++ + A E+ + P+ E+ +Y H ++ + E + Sbjct: 363 AQVALTRGDNKAALTYAERAYAAFPNSVEVQRVYGHCRRIADDAAAMNGGGGKAVEADPY 422 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ + L + A A A++I Sbjct: 423 DYDAQIEHGDALLAAREYEAALAAYEGAVEI 453 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 97/309 (31%), Gaps = 40/309 (12%) Query: 125 LEVQIAL-------AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L Q A+ + + A + Q+ T + L + GD +A YA Sbjct: 320 LRAQAAMTRAKAHHSRGELQRAQGLYQAAAQMDETFHEPNFGLAQVALTRGDNKAALTYA 379 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A P++ V V + + A+ K A ++ + I L Sbjct: 380 ERAYAAFPNSVEVQR-VYGHCRRIADDAAAMNGGGGKAVEADPYDYDAQIEHGDALLAAR 438 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + +A+Y A+E L + + SL++ KA H + Sbjct: 439 EYEAALAAYEGAVEILNNGGKKADGTSTISSSLLNNVGVLKAMTK-----GAAGHEDTRA 493 Query: 298 IYTHLLS----------------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ L + + K ++ +++++ E G I Sbjct: 494 VFLAALEAAAKEEGGKGEKGEALDEPAERRKATGARLQVA-------FNLARLSEEKGDI 546 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPLWISDDGY 400 + A A+ + +P LL A N + + AL DP ++ G+ Sbjct: 547 EDATARYDDLLVASPEMTECLLRKAAMAAKRENFAAAEQFARKALETKPDDPDAMASVGH 606 Query: 401 L---SSVWL 406 + S W Sbjct: 607 VLMKQSRWS 615 >gi|307946654|ref|ZP_07661989.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4] gi|307770318|gb|EFO29544.1| putative TPR repeat-containing protein [Roseibium sp. TrichSKD4] Length = 627 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 94/265 (35%), Gaps = 27/265 (10%) Query: 136 YNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + A + PAT + L + G+ AQR + L P+ + Sbjct: 2 RSAAQKA------KPATTLDKLREGLTLQG--AGEYEKAQRIYKQILKKQPNNKDALHLL 53 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 Y RAI F+ + K A L AR+ + + +++ Sbjct: 54 GVSYRQLGFPKRAIEFITKAIKLDPNQGSFYANL--ARAKSDLPNIPADEILELSEKAIT 111 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV--GKL 311 L + A A +L ++ +AE +L+K+ ++ PH PEI Y LL E L Sbjct: 112 LDSSLPEAHNLRALALKKLDRNEEAEELLKKLVELYPHNPEINRNYGVLLREQKRFEEAL 171 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-----IFLLLAQ 366 + VE++V +S+ E+ D A + +A+K P I L+ Sbjct: 172 DFFITAMRFQPNEVETIVEISRCRTELKQHDVAEKELFIALKRNPNNGKLKHEIARLMFS 231 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 + + AL A+ D Sbjct: 232 VSRVAEG--------LPYALDAVRD 248 >gi|227111825|ref|ZP_03825481.1| hypothetical protein PcarbP_02612 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 389 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 86/279 (30%), Gaps = 51/279 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H +++ + E LL VQ +A Y+ A E ++ R Sbjct: 83 GEVDRAIRIHQALTESASLTFEQ--RLLAVQQLGRDYMAAGLYDRAEESFNQLVDEEDFR 140 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ + ++Q + +W AI + Sbjct: 141 RSAL----------------------------------QQLLQIHQATSDWPTAIEVAEK 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L D+ + + ASI + ++ Sbjct: 167 LVKMGKDQLRVDIAHFYCELALLAMGSDDLDKALTLLKKGATADSQCARASIMMGRIYMA 226 Query: 273 QNKKRKAE----VILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 Q +A +LE K P + Y HL + + R E N + Sbjct: 227 QQDYSRAVESLRQVLEQDKELVSETLPMLQECYQHL--DKPLDWENFLRRCVEENTGAT- 283 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 + ++++ I + A A ++ P +F L+ Sbjct: 284 AELMLADILEREEGAEVAQAYINRQLQRHPTMRVFHRLM 322 >gi|197118892|ref|YP_002139319.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197088252|gb|ACH39523.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 265 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 63/191 (32%), Gaps = 13/191 (6%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A K ++ + L + ++ A + ++ Sbjct: 55 ADDAIAALKKGLELAPEDLDGITAL-----GDVYFESGKHKDALGCYRKVTELQPKECDG 109 Query: 157 VY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 L + + A + KAL++ P + A+ Y E +AI ++ Sbjct: 110 YVSMGLVYNAMER--TEDALKSFQKALELDPKNVFALNAMGDLYYGLGENEKAIEAYHK- 166 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 E + A D D+ ++ + +E+++L + M+ + I Q+ Sbjct: 167 ---GIEIDPADATARFNLGELYYDMDDLESAERETLEAVRLDPDFTMSYLTLGNICIDQD 223 Query: 275 KKRKAEVILEK 285 + ++A E Sbjct: 224 RTQEAIKYFES 234 >gi|209549954|ref|YP_002281871.1| hypothetical protein Rleg2_2370 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535710|gb|ACI55645.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 1272 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 73/264 (27%), Gaps = 41/264 (15%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATR-EFAVYSLYFESCRIG 168 + F ++ + + Q+A E + + P A + Y + Sbjct: 389 DAEKRFPDDPTLPAIRAQLAQLIDDRAQMQEAVNRALSLDPNHPIALAARASYK-ASYES 447 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+N A +A++++P A ++ A A + + Sbjct: 448 DINGALADLNRAIELAPGASGSLNSMGLLQSAR----DANGEAEAAFLRAVALDPQDPVP 503 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++ D+ M + + +L + +A + + + ++ KA L Sbjct: 504 HANLAILYLDQSRMKEAKREIDAALAADPSFDIALLARGRYYLQTGERDKALEDLLAA-- 561 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI---DQAH 345 N +S ++++ E G +QA Sbjct: 562 -----------------------------STANPAHSQSQLMLAAAHYEKGDRIPSEQAV 592 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQ 369 A K P F I+ Sbjct: 593 DNADRLDKNDPVISSFRTAVDIDD 616 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 94/326 (28%), Gaps = 60/326 (18%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML------ 147 S A + ++ T + V L++ IA AE++Y+ A L Sbjct: 274 SAFDGRQVAAETLQEVRRRKLTTLQKARVDLIDATIAGAEKRYDEAARLFAAALPHLDPA 333 Query: 148 ---------------------QIPATREFAVYSLYFESCRIG---DLNSAQRYATKALDI 183 + P + Y ++ G + ++ A Sbjct: 334 RRNMAQYGGYFARSLADPAHVEKPPSSAVGPYGAIMQAYTAGFLKNPRASVDLIKDAEKR 393 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDM 242 PD P + + + + A + N I L AR+ A + D+ Sbjct: 394 FPDDP----TLPAIRAQLAQLIDDRAQMQEAVNRALSLDPNHPIALAARASYKASYESDI 449 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---------PHP 293 + D +++L + + S+ R A E + PH Sbjct: 450 NGALADLNRAIELAPG----ASGSLNSMGLLQSARDANGEAEAAFLRAVALDPQDPVPHA 505 Query: 294 EIANIYTHLLSENTVGKLKRALR-----LEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +A +Y ++K A R L + +L+ + L+ G D+A Sbjct: 506 NLAILYLD------QSRMKEAKREIDAALAA-DPSFDIALLARGRYYLQTGERDKALEDL 558 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHN 374 + A P L+ + Sbjct: 559 LAASTANPAHSQSQLMLAAAHYEKGD 584 >gi|220915380|ref|YP_002490684.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953234|gb|ACL63618.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 1256 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 86/246 (34%), Gaps = 15/246 (6%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + A E + +++E L A+ +L E G +A R +A+ +P Sbjct: 364 EAAALEEDHGRRRQRIEAALAAAPEDSRALRALGQEELDQGRPQAAARLLERAVRAAPGW 423 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + A A L + + A+ ARS + + ++ Sbjct: 424 AAPRVELAEALSRAG--LEARGALLAEATASAFATVPSAVRAAARSARRLGRTEEASARS 481 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 + +L+ D A++ A+ L + A +LE+ +++P ++ Y L + Sbjct: 482 RTLVALRFDDAQTRAAL--AQILADRGDVAGARALLEEALRLDP----SDAYQRLRLGDL 535 Query: 308 VGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + R + + ++ + L G + A A A+++ P+ Sbjct: 536 LAASGRGEEAERAYAAALALAPDEPDAWERRGRARLSQGRVKDAQADLQRALELRPQSPE 595 Query: 361 FLLLAQ 366 LL + Sbjct: 596 LKLLVR 601 >gi|28564906|gb|AAO32537.1| TOM70 [Naumovia castellii] Length = 625 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 69/202 (34%), Gaps = 8/202 (3%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQIP 150 +++ + + +++ Y + + + L VY Q+ + Y A + E ++ Sbjct: 376 YLALISADKSTSQEYSKYFDKALELNPDSLSVYYHRGQLYFITQDYPKAKVEFEKAKELD 435 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T F L + R D + Q+ + P P V + +++ AI Sbjct: 436 ETNIFPYIQLACLAYRENDFDRCQKLFDETRQKFPTYPEVPTFYAEILADKGDFALAIKQ 495 Query: 211 ------LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 L + +KN + + + ++ + ++ ++ S A + Sbjct: 496 YDIATRLEKAQKNIHVGIAPLVGKATVLARQP-NLLNLKEATQLMEKACEIDPRSEQAIV 554 Query: 265 CAAKSLISQNKKRKAEVILEKI 286 A+ + + A + EK Sbjct: 555 GLAQLKLQNEEVDLAIELFEKA 576 >gi|222624615|gb|EEE58747.1| hypothetical protein OsJ_10236 [Oryza sativa Japonica Group] Length = 827 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 15/224 (6%) Query: 173 AQRYATKALDISPD----APWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A +A ++ P + + ++ AKE + L + + Sbjct: 272 ALSSFRRACELQPTDVRPHFRAGNCLYALGRHSEAKE--EYLLALEAAEAGGSQSADILP 329 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + +G ++ + E+ LC + A +L + R AE LE+ Sbjct: 330 QIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEA 389 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H ++ + H + ++ ++ + ++ V++L + + ++ G Sbjct: 390 IFLKPDYADAHCDLGSA-LHAIGDDDRA-VQEFQKAIDLKPGHVDALYNLGGLNMDAGRF 447 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +A + I P L + +++ + A Sbjct: 448 VRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 491 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 9/165 (5%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--MLQIP 150 +++ A + L H + + + LL +Y A + LE L+ Sbjct: 337 IAMEAEGMVLGACEHYREAAILCPSHARALKLLGS-ALFGVGEYRAAEKALEEAIFLKPD 395 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + GD + A + KA+D+ P + + A + RA Sbjct: 396 YADAHCDLGSALHAI--GDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEM 453 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + N RA L +++ +G+ + E+ K+ Sbjct: 454 YTRVLSIRP--NHWRAQL--NKAVALLGQGESEEAKKALKEAFKM 494 >gi|218779730|ref|YP_002431048.1| hypothetical protein Dalk_1883 [Desulfatibacillum alkenivorans AK-01] gi|218761114|gb|ACL03580.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 663 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 73/236 (30%), Gaps = 23/236 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G L+ A + +A I PD P + Q A ++++A + A Sbjct: 421 QGKLDEAVEHFRQASAIQPDYPEAWNNLSQAAFAAGDYAQAKALAEKALSLDPV----NA 476 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + D + + + A++ AK L ++ KA V E Sbjct: 477 LGRWNAGMACMRLNDRHCALKHFALATASDPDWGRANLMLAKLLAAKGHPEKARVFFENA 536 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 V P H A + L L R ++ ++ L ++ G Sbjct: 537 LAVMPESLEVHLVFAQVLEDL--GEYRQALGVYDRALLLDSDNPAVLYGKAQALFHAGYR 594 Query: 342 DQAHAKAMLAMKIAP------RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + A + AP +LLA + + + + AL A PD Sbjct: 595 TEGAALMKILTVSAPDNPGVNYNYGLMLLA------LGDGARAQAYLEKALAAKPD 644 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 67/252 (26%), Gaps = 10/252 (3%) Query: 35 RLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAM-LFHMLHKRNYDKGYKALYT-GL 92 LYR P ++ + +L L + Y+A G Sbjct: 359 WLYRRRPVFAAALSGMIVAGLCVLTWNQALLFKDSQTLWERTLEINPHS--YQAHNDLGA 416 Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + + A + S L Q A A Y A E L + Sbjct: 417 ILAGQGKLDEAVEHFRQASA-IQPDYPEAWNNLS-QAAFAAGDYAQAKALAEKALSLDPV 474 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 ++ R+ D + A ++ A PD + + +A F Sbjct: 475 NALGRWNAGMACMRLNDRHCALKHFALATASDPDWGRANLMLAKLLAAKGHPEKARVFFE 534 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 E + + D G+ + +L L ++ A++L Sbjct: 535 NALAVMPESLEVHLVF----AQVLEDLGEYRQALGVYDRALLLDSDNPAVLYGKAQALFH 590 Query: 273 QNKKRKAEVILE 284 + + +++ Sbjct: 591 AGYRTEGAALMK 602 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 73/244 (29%), Gaps = 15/244 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---W 189 + + + A E I A +L + GD A+ A KAL + P W Sbjct: 421 QGKLDEAVEHFRQASAIQPDYPEAWNNLSQAAFAAGDYAQAKALAEKALSLDPVNALGRW 480 Query: 190 -VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A ++ + A+ + +W R +L + A KG + Sbjct: 481 NAGMACMRL----NDRHCALKHFALATASDPDWGRANLML----AKLLAAKGHPEKARVF 532 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW---KVNPHPEIANIYTHLLSE 305 +L + S+ + A+ L + R+A + ++ NP + Sbjct: 533 FENALAVMPESLEVHLVFAQVLEDLGEYRQALGVYDRALLLDSDNPAVLYGKAQALFHAG 592 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 L ++ + L +G +A A A+ P Sbjct: 593 YRTEGAALMKILTVSAPDNPGVNYNYGLMLLALGDGARAQAYLEKALAAKPDFSEAQKAL 652 Query: 366 QIEQ 369 +I + Sbjct: 653 EIAR 656 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 28/99 (28%), Gaps = 6/99 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATREFA 156 A + Y + V + Q ++++ P Sbjct: 558 GEYRQA--LGVYDRALLLDSDNPAVLYGKAQALFHAGYRTEGAALMKILTVSAPDNPGVN 615 Query: 157 V-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y L + GD AQ Y KAL PD +A+ Sbjct: 616 YNYGLMLLAL--GDGARAQAYLEKALAAKPDFSEAQKAL 652 >gi|159468965|ref|XP_001692638.1| splicing factor, component of the U4/U6-U5 snRNP complex [Chlamydomonas reinhardtii] gi|158277891|gb|EDP03657.1| splicing factor, component of the U4/U6-U5 snRNP complex [Chlamydomonas reinhardtii] Length = 947 Score = 53.8 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 103/310 (33%), Gaps = 17/310 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148 ++ + A +++L+ + A + A L Sbjct: 577 RAAAALEKAHGSRAALDELLKRAVTFCPQSEVLWLMAAKEAWLGGDVDGARAILARAFAS 636 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKA----LDISPDAPWVTEAVVQQYVLAKEW 204 P + + + E + A+ KA W+ A+V++ + + Sbjct: 637 NPDSEAIWLAAFKVEFEN-NEPERARALLAKARENEAANGYPRVWMKSALVEREL--GDG 693 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++ L + + + + L++ + G A+ L C +SI Sbjct: 694 AKERALLEEGIRRFPAFEKF--YLMLGQLEARPGGGGAEAARAAYRAGLARCPDSIPLWR 751 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALR-LEEINK 322 AA+ +A +LE+ N P+ A ++ + +E G K A L + + Sbjct: 752 SAARLEEEAGNVARARALLEQARLKN--PKSAELWLAAIRTEQRAGNEKAADTALAKALQ 809 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYW 381 + S + ++ A+ M KA A+K + +AQ+ A+ +K W Sbjct: 810 DCPTSGPLWAE-AISMAPRPARKTKATDALKRCDNDPHVVAAVAQLFWADRK-VEKARSW 867 Query: 382 TQSALHAMPD 391 A+ PD Sbjct: 868 FNRAVTLNPD 877 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 95/307 (30%), Gaps = 43/307 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + L L A + + +IP +V L+ + Sbjct: 354 AKALLARGVAQLPESTKLWMAAAKLEADDTAKARVLRKALERIP----TSVR-LWKAAVE 408 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---------- 216 + + A+ ++A++ P A + A+ + + A LN +K Sbjct: 409 LAAEDDARILLSRAVECCPQAVELWLALARLET----YENARKVLNNARKAVPTEPAIWV 464 Query: 217 --------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + + I+ ++L++ ++ I+ + C+ S + A+ Sbjct: 465 TAAKLEEAHGADQDTVDKIV--GKALKSLSANGVVIHRDAWIKEAENCERSSPPQLVTAR 522 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +++ V+P A + G ++ A L + S Sbjct: 523 AIVR----------CVAGLGVDPVDLEATLVADAEEAAKRGAVETARALYAQALATFPSQ 572 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQANSHNTDKILYWTQS 384 + + A + + A +K A P+ E+ L+A E + D Sbjct: 573 AQIWRAAAALEKAHGSRAALDELLKRAVTFCPQSEVLWLMAAKEAWLGGDVDGARAILAR 632 Query: 385 ALHAMPD 391 A + PD Sbjct: 633 AFASNPD 639 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 4/124 (3%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E+ + G + +A+ +AL P + A + L++ K A + Sbjct: 548 EAAKRGAVETARALYAQALATFPSQAQIWRAAAALEKAHG----SRAALDELLKRAVTFC 603 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +L + + E GD+ + + +S + A K N+ +A + Sbjct: 604 PQSEVLWLMAAKEAWLGGDVDGARAILARAFASNPDSEAIWLAAFKVEFENNEPERARAL 663 Query: 283 LEKI 286 L K Sbjct: 664 LAKA 667 >gi|89093771|ref|ZP_01166717.1| hemY protein [Oceanospirillum sp. MED92] gi|89081901|gb|EAR61127.1| hemY protein [Oceanospirillum sp. MED92] Length = 417 Score = 53.4 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 132/386 (34%), Gaps = 36/386 (9%) Query: 25 PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKG 84 P V I + N TS +V+L L A+ ++ + A L RN Sbjct: 26 PGYVLIAYNNTTVETSLWVLLIALVLAFVAFHIVVNLFTHTKLPTARLKAWKDGRNQQIS 85 Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKL 143 + GL S++ N A+K + +++ L+ L + A + + L Sbjct: 86 RRKTLKGLTSLSEGNWAQAQKQLAQAAERSDL---PLINYLAAARAAHEQNNEQATDDLL 142 Query: 144 -EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + P S G L + ++P +V + + Y+ Sbjct: 143 QKARSTTPEAEVTVAISQAEIQLSRGQLEPCLATLLRLRTLAPKNTYVMKLLKDIYLRLN 202 Query: 203 EWSRAITFL-----NQKKKNAK--EWNRNRAILLIARSLENA--DKGDMIASYHDAIESL 253 +W + + +Q K+ + E +R L+ SL+N + D Sbjct: 203 DWQQLSKLIPILRKHQALKDDELSELSRQCYSKLLDESLQNLPVETSDEERLKTLGRTWH 262 Query: 254 KLCDNSIMA--------SICAAKSLISQNKKRKAEV----ILEKIWKVNPHPEIANIYTH 301 L A + L+S + +AE ++++ W + +Y Sbjct: 263 DL-----PAEQTRDGDLVQRYTELLVSLGAESRAEQNLRDLIKRNWDEK----LVTLYGR 313 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + EN +L A + + ES L+ + +++L QA ++ I P E Sbjct: 314 VNGENAKKQLDNARGWLKSHAESPALLLTLGRLSLRNEHWGQAVKYFEQSLDIEPNSETL 373 Query: 362 LLLAQIEQANSHNTDKILYWTQSALH 387 LA++ + + + ++ Q L+ Sbjct: 374 AELARLLR-HLGDGERAQTLLQQNLN 398 >gi|270295832|ref|ZP_06202032.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273236|gb|EFA19098.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 319 Score = 53.4 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 10/272 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+ + A K + E + YL Q+ + + AH+ LE M +I Sbjct: 33 DGMRAQRMGRTDYAIKCFTEALA-IQEDFETMGYL--AQVYTQTNELDEAHKLLERMTEI 89 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 SL D + A KA++I + + + I Sbjct: 90 EPEHTSTYLSLANVCYMQEDYPAMAGAAKKAIEIEEGNAMAHYLLGKADNGQGDGIMCIA 149 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + ++ R + R+ + D L A + K Sbjct: 150 HLTKAIVLKDDFIEAR----LLRAEALVQMQQYKEAMEDIDTILAQDPEDESAILLRGKI 205 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVE 326 + K KAE +K+ ++NP E A +Y ++ ++ E+N E Sbjct: 206 EEATGNKEKAESSYQKVTELNPFNEQAFLYLGQLYITQNKLAEAIELFTEATELNPNFAE 265 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + L G + + +++ P++ Sbjct: 266 AYHERGRAKLLNGDKEGSAEDMKKGLELNPKE 297 >gi|241661899|ref|YP_002980259.1| tetratricopeptide repeat-containing protein [Ralstonia pickettii 12D] gi|240863926|gb|ACS61587.1| Tetratricopeptide domain protein [Ralstonia pickettii 12D] Length = 645 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 22/208 (10%) Query: 191 TEAVVQQY---VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +A++Q + + + A+ L + + + R L +AR+ D + Sbjct: 196 ADALLQLQQQMSKSSDPAGAVGALQR--IASHDMQRPETHLALARAK--VAAKDTAGALT 251 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302 + +LKL A+I AA+ L + + A L K P H +A +Y + Sbjct: 252 ELDTALKLRPGYEDAAILAAE-LRADSDPDAAITGLRSFLKAAPASIDGHLALARMYL-V 309 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKE 359 ++ + + L++I + + + L+ D A A +P Sbjct: 310 RNQQDKARAE-FETLKKIAPNDARITLALGLLNLQQRQYDDAERYLKEYVTATAKSPTLS 368 Query: 360 ---IFLLLAQIEQANSHNTDKILYWTQS 384 + LAQ+ + + L W Sbjct: 369 PEPGYQGLAQLAE-EKRDYAGALGWVDK 395 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 90/272 (33%), Gaps = 8/272 (2%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + + + + +L +++L A+ + Q FA + Sbjct: 86 RVALNEDIMYRVLASEVSLQRGLVEPAYRTYLALAQDTRDPRFAQRATEIAFLTRS-PAQ 144 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A A +++SP + + V +WS L + R A+L + + Sbjct: 145 AMTAARLWVELSPTSMPARQVQQLLLVATGQWSEVEPMLQAQLNKVSPGQRADALLQLQQ 204 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291 + + I S + + A A++ ++ A L+ K+ P Sbjct: 205 QMSKSSDPAGAVGALQRIASHDMQ---RPETHLALARAKVAAKDTAGALTELDTALKLRP 261 Query: 292 -HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + + A + L +++ + + S++ + ++++ L D+A A+ Sbjct: 262 GYEDAAILAAELRADSDPDAAITGLRSFLKAAPASIDGHLALARMYLVRNQQDKARAEFE 321 Query: 350 LAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 KIAP I L L + D Y Sbjct: 322 TLKKIAPNDARITLALGLLNLQQRQYDDAERY 353 >gi|55670588|pdb|1W3B|A Chain A, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. gi|55670589|pdb|1W3B|B Chain B, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha Length = 388 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 85 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 142 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 143 NLLKA-----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 197 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 198 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLACVYYEQGLI 253 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L + A A +L + +AE ++ P H + N + Sbjct: 254 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLAN 313 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A+RL E + ++ + + G + +A A++I+P Sbjct: 314 IKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT 371 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 40/252 (15%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNR 223 G L A + AL + PD + V A + A+ + + + Sbjct: 78 KERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCV 137 Query: 224 NRAILLIARSLENADKGDMI-----------------------------ASYHDAIESLK 254 + + ++L ++ + H +++ Sbjct: 138 RSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 197 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENTV 308 L N + A I L +A + ++P H +A +Y L + + Sbjct: 198 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAI 257 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 +RA+ L ++ ++ E GS+ +A A+++ P + LA I Sbjct: 258 DTYRRAIEL---QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANI 314 Query: 368 EQANSHNTDKIL 379 ++ + + + Sbjct: 315 KREQGNIEEAVR 326 >gi|71276208|ref|ZP_00652487.1| TPR repeat [Xylella fastidiosa Dixon] gi|71900467|ref|ZP_00682598.1| TPR repeat [Xylella fastidiosa Ann-1] gi|170730700|ref|YP_001776133.1| tetratricopeptide repeat protein [Xylella fastidiosa M12] gi|71162969|gb|EAO12692.1| TPR repeat [Xylella fastidiosa Dixon] gi|71729773|gb|EAO31873.1| TPR repeat [Xylella fastidiosa Ann-1] gi|167965493|gb|ACA12503.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 392 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 50/389 (12%), Positives = 112/389 (28%), Gaps = 44/389 (11%) Query: 60 AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107 F A L + R G+ + GL + + A ++ Sbjct: 7 WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 66 Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163 + + ++ L +L + + + A + + + P + FA+ +L + Sbjct: 67 AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 121 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222 + G L+ A+ T+ I AP ++ Y ++W +AI + + + Sbjct: 122 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVATGEPMG 181 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + A + + + + S+ A I + A Sbjct: 182 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRAGIIEGRIEADLGHHEAAVRA 241 Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333 E+ + +P P + Y + + A E + + +++ Sbjct: 242 WERAARHDPEYLPEIIPALLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 295 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391 + QA +K P L + A+ + LY + + + Sbjct: 296 LIESQEGSAQARGYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 355 Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417 P + G + W P K Sbjct: 356 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 382 >gi|332992390|gb|AEF02445.1| hypothetical protein ambt_04475 [Alteromonas sp. SN2] Length = 937 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 85/263 (32%), Gaps = 22/263 (8%) Query: 107 HSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYS 159 + E L+ Q+ +A +Q A E +++ P + Sbjct: 330 TAAKDFSAYLQKEPEDLQAVLMLSQVYMATQQDKQALLLLERYQEPLMENPDSALM---- 385 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L R A+R + PD + ++ + +A++ L + Sbjct: 386 LGDLFIRQKKSFKAERLLRNLEEKYPDEGKLQLFKIKLMAARGKQEQALSILQENL---- 441 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 A L SL N + A KL + A LI Q + A Sbjct: 442 PKYTQNAGFLFTYSLMNLQAERFEPALEGANLLNKLFPDEAEVYNLKAGILIRQGQLEAA 501 Query: 280 EVILEKIWKVNPH--PE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + +EK + NP P +A + L + + L L ++ + E+L++ + Sbjct: 502 KENIEKALEQNPTLFPAKFNLAATESRLGNVDESNVL--VEELLILSPQHSETLMLKAFN 559 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 + G ++ A + + + P Sbjct: 560 MTKQGYVEPAKQIYLDVLTLDPS 582 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 105/277 (37%), Gaps = 30/277 (10%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL SIA N L + + + L+ Q+A + + A L+ L Sbjct: 173 GLASIALQNEELVEANQLIQNAISIEPENAISWRLKGQLAYRQGDKDAATANLQKALTFN 232 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ +L D ++A+ + + ++ +P+ P ++ ++ +++ AI Sbjct: 233 RNDPIALRNLVDLYLEAKDYDTAKLFVDEIIEDTPNDPLA--ILLNSWLQSRDNKEAID- 289 Query: 211 LNQKKKNAKEWNRN--------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 N+K K ++ + +LL L N +M + D L+ + A Sbjct: 290 -NKKLKELNDFMAQLDPELITSQPMLLYISGLTNFFNNNMETAAKDFSAYLQKEPEDLQA 348 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP---HPE----IANIYTHLLSENTVGKLKRAL 315 + ++ ++ + ++A ++LE+ P +P+ + +++ +L Sbjct: 349 VLMLSQVYMATQQDKQALLLLER--YQEPLMENPDSALMLGDLFIRQKKSFKAERL--LR 404 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 LEE + E + + KI L A K A+ Sbjct: 405 NLEEKYPD--EGKLQLFKIKLMA-----ARGKQEQAL 434 >gi|88705969|ref|ZP_01103677.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88699683|gb|EAQ96794.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 389 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 78/253 (30%), Gaps = 33/253 (13%) Query: 194 VVQQYVLAKEWSRAITFL--------------NQKKKNAKEWNRNRAILLIARSLENADK 239 +V+ Y EW RAI + + + A +LE A++ Sbjct: 135 LVEIYRSESEWQRAIDEAKALLPKRSLLGGEAQAPQLSGQPIPVQLAHFYCELALEVAEE 194 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHP 293 G + E+L+ AS+ + + R A ++E + P Sbjct: 195 GRSDDARAMLQEALRSDPACARASLELGRIEGAAGNHRPAIEALTRVVEQHAEFLPEAIP 254 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI--DQAHAKAMLA 351 + Y L E+ + L E + ++++ D AH Sbjct: 255 ALRECYAALGEEDALS-----AYLRRCLDEHPSTPLMIAVADDIRRDEGNDAAHEFLAHR 309 Query: 352 MKIAPRKEIFLLLAQIEQ----ANSHNTDKILYWTQSALHAMPDPLWISD-DGYLSSVWL 406 + AP L L +I+Q ++ +L L + P + D G+ + L Sbjct: 310 LAEAPSLRGLLRLIRIQQEDKPGTPGDSLAMLGVLLDRLIEVR-PAYRCDHCGFSARHLL 368 Query: 407 PLSPISKTLCYFE 419 P K F Sbjct: 369 WFCPGCKYWGTFR 381 >gi|30261614|ref|NP_843991.1| TPR domain-containing protein [Bacillus anthracis str. Ames] gi|47526814|ref|YP_018163.1| TPR domain-containing protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49184446|ref|YP_027698.1| TPR domain-containing protein [Bacillus anthracis str. Sterne] gi|65318884|ref|ZP_00391843.1| COG0457: FOG: TPR repeat [Bacillus anthracis str. A2012] gi|165869318|ref|ZP_02213977.1| TPR domain protein [Bacillus anthracis str. A0488] gi|167633410|ref|ZP_02391735.1| TPR domain protein [Bacillus anthracis str. A0442] gi|167639113|ref|ZP_02397386.1| TPR domain protein [Bacillus anthracis str. A0193] gi|170686154|ref|ZP_02877376.1| TPR domain protein [Bacillus anthracis str. A0465] gi|170706452|ref|ZP_02896912.1| TPR domain protein [Bacillus anthracis str. A0389] gi|177650519|ref|ZP_02933486.1| TPR domain protein [Bacillus anthracis str. A0174] gi|190568687|ref|ZP_03021592.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I] gi|227815634|ref|YP_002815643.1| TPR domain protein [Bacillus anthracis str. CDC 684] gi|229604256|ref|YP_002866022.1| TPR domain protein [Bacillus anthracis str. A0248] gi|254683106|ref|ZP_05146967.1| TPR domain protein [Bacillus anthracis str. CNEVA-9066] gi|254734455|ref|ZP_05192167.1| TPR domain protein [Bacillus anthracis str. Western North America USA6153] gi|254740866|ref|ZP_05198554.1| TPR domain protein [Bacillus anthracis str. Kruger B] gi|254755104|ref|ZP_05207138.1| TPR domain protein [Bacillus anthracis str. Vollum] gi|254759641|ref|ZP_05211665.1| TPR domain protein [Bacillus anthracis str. Australia 94] gi|30255842|gb|AAP25477.1| tetratricopeptide repeat protein [Bacillus anthracis str. Ames] gi|47501962|gb|AAT30638.1| TPR domain protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49178373|gb|AAT53749.1| TPR domain protein [Bacillus anthracis str. Sterne] gi|164714758|gb|EDR20276.1| TPR domain protein [Bacillus anthracis str. A0488] gi|167512903|gb|EDR88276.1| TPR domain protein [Bacillus anthracis str. A0193] gi|167531448|gb|EDR94126.1| TPR domain protein [Bacillus anthracis str. A0442] gi|170128550|gb|EDS97417.1| TPR domain protein [Bacillus anthracis str. A0389] gi|170669851|gb|EDT20592.1| TPR domain protein [Bacillus anthracis str. A0465] gi|172083663|gb|EDT68723.1| TPR domain protein [Bacillus anthracis str. A0174] gi|190560287|gb|EDV14267.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I] gi|227007196|gb|ACP16939.1| tetratricopeptide repeat protein [Bacillus anthracis str. CDC 684] gi|229268664|gb|ACQ50301.1| TPR domain protein [Bacillus anthracis str. A0248] Length = 420 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|319793868|ref|YP_004155508.1| cellulose synthase operon c domain protein [Variovorax paradoxus EPS] gi|315596331|gb|ADU37397.1| cellulose synthase operon C domain protein [Variovorax paradoxus EPS] Length = 1449 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 18/227 (7%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD +A++ +AL D P + + + + A L + + + Sbjct: 301 ALDRGDPATAEQRFQQALRTKADDPEALGGLGLVRLRQERFGEAQELLERAARGSGGSKW 360 Query: 224 NRAI------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 N A+ L+ ++ +K D + ++++ + + A + + Sbjct: 361 NSALQSATYWSLVGQARAAREKNDARGAQSLLERAVRIDPRESVGQVALADLRAAAGELP 420 Query: 278 KAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKR------ALRLEEINKESVE 326 +AE +++ + P + +Y + L R A +L + VE Sbjct: 421 QAEQGYKRVLESKPSDTQALRGLIAVYGRQGRADEALALARQLTPEQASQLSGLRDIQVE 480 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANS 372 ++ + G A AM AP L LA I + Sbjct: 481 QARAKARQQADAGDAPGAQRTLEDAMLAAPDSPWVRLDLANIYRRQG 527 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 99/328 (30%), Gaps = 33/328 (10%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 LY ++ ++ ++ ++ + S + V L E AL A ++ + L Sbjct: 259 LYQDYLASNPNDAAVSARLETLTSGKTAAAASPGVPLGEGFRALDRGDPATAEQRFQQAL 318 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW---VTEAVV-----QQYV 199 + A A+ L R AQ +A S + W + A Q Sbjct: 319 RTKADDPEALGGLGLVRLRQERFGEAQELLERAARGSGGSKWNSALQSATYWSLVGQARA 378 Query: 200 LAK--EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + A + L + + + + L R+ A + K Sbjct: 379 AREKNDARGAQSLLERAVRIDPRESVGQVALADLRAAAGE--------LPQAEQGYKRVL 430 Query: 258 NSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNPH--------PEI------ANIYTHL 302 S + A + LI+ ++ +A+ L ++ P +I A Sbjct: 431 ESKPSDTQALRGLIAVYGRQGRADEALALARQLTPEQASQLSGLRDIQVEQARAKARQQA 490 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + + G + +S + ++ I G + +A + P L Sbjct: 491 DAGDAPGAQRTLEDAMLAAPDSPWVRLDLANIYRRQGLVAEARGVMEGLLMSQPDMPDAL 550 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMP 390 + + + S + + + + A Sbjct: 551 YASALLASESGDAAGGIQYLERIPAASR 578 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 17/200 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEM-----MLQIPA 151 + P A M + + N + LL + L +Q L M Sbjct: 641 GDAPRALAMSRQLLAR--SPNPGIGDRLLYASVLLKTKQDVELSAVLRQLQPAGMTAAQR 698 Query: 152 TREFAVYSLYFE----SCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + ++ + + R G+L +A L PD P A+ + Y A++ ++ Sbjct: 699 SDFDSLRIAFALRQTDALREAGNLEAAYNAMAPVLAERPDDPRAMAALARLYSAARDETQ 758 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ + + + A + + + + + +LK + A Sbjct: 759 ALALYQRVLQRSPTDLDALL----AAAASASALRQHSEAENYVMAALKQAPDQSRVLAAA 814 Query: 267 AKSLISQNKKRKAEVILEKI 286 + + RKAE L Sbjct: 815 GRVYRNAGDSRKAEQYLRAA 834 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 107/354 (30%), Gaps = 70/354 (19%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + P A++ + + V L I + A +E +L A Sbjct: 492 AGDAPGAQR--TLEDAMLAAPDSPWVRLDLANIYRRQGLVAEARGVMEGLLMSQPDMPDA 549 Query: 157 VYSLYFESCRIGDLNSAQRYATK---------ALDISPDAPWVTEAVVQQYVLA--KEWS 205 +Y+ + GD +Y + + W + LA + Sbjct: 550 LYASALLASESGDAAGGIQYLERIPAASRTRDMAALQRRL-WAQSQAQRAQALARQGQVD 608 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-------- 257 A L Q A + A L + A+ GD + + + L Sbjct: 609 AARQVLGQA--EAALSSDMPAELWGQLAGAYAEIGDAPRALAMSRQLLARSPNPGIGDRL 666 Query: 258 --------------------NSIMASICAAK-----------SLISQNKKRKAEVILEKI 286 A + AA+ +L + R+A LE Sbjct: 667 LYASVLLKTKQDVELSAVLRQLQPAGMTAAQRSDFDSLRIAFALRQTDALREAGN-LEAA 725 Query: 287 WKV-NP----HPE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + P P+ +A +Y+ E L R+ + + +++L+ + Sbjct: 726 YNAMAPVLAERPDDPRAMAALARLYSAARDETQA--LALYQRVLQRSPTDLDALLAAAAS 783 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 A + +A M A+K AP + L A N+ ++ K + ++A+ A Sbjct: 784 ASALRQHSEAENYVMAALKQAPDQSRVLAAAGRVYRNAGDSRKAEQYLRAAVDA 837 >gi|85716815|ref|ZP_01047781.1| Tetratricopeptide [Nitrobacter sp. Nb-311A] gi|85696313|gb|EAQ34205.1| Tetratricopeptide [Nitrobacter sp. Nb-311A] Length = 736 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 12/243 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D+ A+ +A P + ++ Q + K W+ A + K + + Sbjct: 454 QRRDDVTHAEHVLIEASGRYPQNLQLLSSLAQIKLSQKNWTGAAAVADAVGKLGEGRVLS 513 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 I R+L A +G + S ++ + ++ + + + Q K KA +L+ Sbjct: 514 DQI----RALALAGQGKVDESIAALEDAHQAAPTALQPVVSLVSAYVKQGKPEKAASLLQ 569 Query: 285 KIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +I +PE + I L V ++ S E +S + + Sbjct: 570 EI--SQKYPENSQILVLLGKVQLGQNKDVDAIQSFKNATAKQPNSPEGYAALSDLYIRQK 627 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399 + D A + +K P LL Q + D + +S L A P+ ++ + Sbjct: 628 NYDAAESVLQAGLKQMPADLNLQLLYAGLQILKGDHDAAISQYESILRARPNAA-VAVNN 686 Query: 400 YLS 402 +S Sbjct: 687 LVS 689 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 60/183 (32%), Gaps = 10/183 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + +++ P + + V A+ + K++ A L ++L Sbjct: 91 RRIVELDPSDLDARLKLARIMVSGGAVDGALKVIEVAKEDKPS-----AALHALKALILL 145 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--- 294 D + +A + ++ ++ A A + + + +LE + V P E Sbjct: 146 KTNDSAGAVREAQRAFEIDPTNVDAVSLLASKKLFEGDADGSLKLLESL-AVAPQDETRI 204 Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + + + + R+ +N + + ++ + D+A + + Sbjct: 205 SLLRMQAYARKGDLAKAEELLRRIISLNPKEPSYQSQLIQLLIAQRRFDEAEKELRTRVS 264 Query: 354 IAP 356 P Sbjct: 265 ANP 267 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 81/237 (34%), Gaps = 14/237 (5%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L +I ++ + A + +E+ + P+ A+ +L + D A R A +A Sbjct: 103 ARLKLARIMVSGGAVDGALKVIEVAKEDKPSAALHALKALIL--LKTNDSAGAVREAQRA 160 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 +I P + + + + ++ L ++ R + + A + KG Sbjct: 161 FEIDPTNVDAVSLLASKKLFEGDADGSLKLLESLAVAPQDETRISLLRMQAYAR----KG 216 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EI 295 D+ + + L + LI+Q + +AE L NPH ++ Sbjct: 217 DLAKAEELLRRIISLNPKEPSYQSQLIQLLIAQRRFDEAEKELRTRVSANPHDSKIALDL 276 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + L + + +L ++ + + + ++++ + A Sbjct: 277 VR-FLSLAKGPEAARTE-LDKLIKVGGDVFDYEMALAQLDVSQNKSTDAIQSLQKLA 331 >gi|253702417|ref|YP_003023606.1| hypothetical protein GM21_3831 [Geobacter sp. M21] gi|251777267|gb|ACT19848.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21] Length = 1034 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 58/218 (26%), Gaps = 35/218 (16%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + A +L+ +L G A++ +AL++ P Sbjct: 569 RANALRAAGELPGAVALYRRLLERLPACAEIHNNLGLALQDQGLDTEAEQSFRRALELKP 628 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + V E A+ F + + + + A + L+ ++ + Sbjct: 629 ELADAHNNLGTLLVARGEHEGALPFFEKALELREGY--LPAYANLGSCLQVLEE--PERA 684 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++ L A I + + KA + Sbjct: 685 VELYRRAIALDPGFFEARINLGTAYQDLMQPEKAIEV----------------------- 721 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 L E+ E E+ ++ L +G + Sbjct: 722 --------YRELLELAPEHPEAHWNLALSLLSVGDFKR 751 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 62/207 (29%), Gaps = 24/207 (11%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL++ N+ A + S + E + ++ A Sbjct: 40 DGLLAYRRGNLEEALQAFSRAAFLQPESAELRNNV--GVAYQDLNCHDSAALHFRE---- 93 Query: 150 PATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 ++ Y E+ +GD A R A+ +P + Sbjct: 94 ----ALSLRGEYPEARCNLATALLHLGDAEEAIRNYCDAIAAAPGYADAYHLLGNALRRQ 149 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 EW A+ + + + + ++ + SL ++ D + +L + + + Sbjct: 150 GEWEGAVQCYQKALE--LDPQNLKTLVNLGGSLFTLNRFDEAIAAQ--RRALSIDPDHVD 205 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWK 288 A A L++ ++ E W+ Sbjct: 206 AHWNLALVLLTTGNYQEGFR--EYQWR 230 >gi|166710178|ref|ZP_02241385.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 421 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 113/361 (31%), Gaps = 31/361 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G YR + L +L + LL+ Sbjct: 7 VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWDKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYF----ESCRIGDLNS 172 L V++A A A + + T L E+ D + Sbjct: 120 ALAS--AVRVADARGDEAAATALAQQLAVRDPTAYALLQGERHLARQRPVEAINALDSAN 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ + L + T A+ Q + + + Q + ++ A L Sbjct: 178 AQPLPARGLLLR------THALTQIGRADEAYGQLGALRQQAVLSPDAYSALEATLAEQT 231 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP 291 L+ +D + + ++L+ C + A + AA E L+ W + Sbjct: 232 LLQASDANALAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDES- 290 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +Y L E + A R +S L+ ++++A QA A Sbjct: 291 ---LVRLYGVLPLEKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347 Query: 352 M 352 + Sbjct: 348 I 348 >gi|298531121|ref|ZP_07018522.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509144|gb|EFI33049.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1016 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 24/206 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + L + L + + A + E + A+ L + G+ + A + KA Sbjct: 311 ILLPGARAYLQKGRLEDAQKLFEKASGHENLKVQALPGLARVEMKRGNPDKAVYFLEKAA 370 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + + P + Q + + + K + +L + A +G+ Sbjct: 371 ALDENNPEPFILLSQTRGKPLQ-----EHVEKVLKEETDP-----AVLTHLAQALAGQGE 420 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +L A A+ S+ R + + EI ++ Sbjct: 421 FELAAEVYDSALAHDPGFFEAGAGLAEVYGSKG--RYSASL-----------EILDMMLE 467 Query: 302 LLSENTVGKLKRALRLEEINKESVES 327 E+ L RA L +++ ES Sbjct: 468 EFPESYKLLLTRARVLA-WSRQYAES 492 >gi|219847542|ref|YP_002461975.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219541801|gb|ACL23539.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] Length = 1112 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 88/317 (27%), Gaps = 38/317 (11%) Query: 85 YKALYTGLM-----SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 Y+ L + AA + + + + L IA A Sbjct: 785 YQLLARAYLIGNRLEAAAQEALQTLQRTANRNDPEAVNARVNALLTLADIARRRNDSAAA 844 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI------SPDAPWVTEA 193 + +L + A L + G A Y A+ + + W+ E+ Sbjct: 845 EDYYRQVLAVDPQSIAAHIGLGELAGEQGQWGIALGYFETAVALPGGDTNATAQFWLGES 904 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 ++ + + +RA T + + + L+ + G A+ ++L Sbjct: 905 LL----RSGQLARARTAYQRALELQPIYPE----ALLGLAQTQHALGQADAALQTVEQAL 956 Query: 254 KLCDNSIMASICAAKSLISQNKKRKA-----------EVILEKIWKVNPHPEIANIYTHL 302 N A + K L + +A + I E ++ + Sbjct: 957 HQRSNYAEAHLFRGKLLQEAGRFAEARAAYDAAIGTNDRIAESFYR--------RALLAI 1008 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + ++ R + E+ + + G I+ A A+ + P + Sbjct: 1009 RDNDYDQAIRDLNRTVTLQPNFPEAYYWLGRAYYTQGRIENAQQAIERAITLNPDYSEAI 1068 Query: 363 LLAQIEQANSHNTDKIL 379 + + + N Sbjct: 1069 FYSGLIAEDRANVAAAR 1085 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 80/244 (32%), Gaps = 15/244 (6%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 ALA A L+ A +L + GD +A + A A SP Sbjct: 555 ALARNDRERAVTAFRSALERNNRFFPAHVALARLAEADGDWPAAIEHWRALVAWQESPYT 614 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V A + ++ A L A I + D G + Sbjct: 615 A-VNLARALRRSGVSGFAEAERIL-------VPLATTSAEAAIELARLYNDAGYPKEAAA 666 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 +++L L S +A+ ++ I + +AE L + A + L E Sbjct: 667 VYLDALTLDPRSTVAAFELGETYIRLGELTEAERRLRDAITFDERNLDARLRLAELYEGP 726 Query: 308 VGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFL 362 + + RA+ I + L+ + + AL + + A A+++ P + Sbjct: 727 LNQPNRAIDQYRIALGQGVNDLNQLIAIGQAALNVNTATVAIQALERALQLNPDSVTTYQ 786 Query: 363 LLAQ 366 LLA+ Sbjct: 787 LLAR 790 >gi|319761487|ref|YP_004125424.1| pep-cterm system tpr-repeat lipoprotein [Alicycliphilus denitrificans BC] gi|317116048|gb|ADU98536.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus denitrificans BC] Length = 926 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 85/273 (31%), Gaps = 19/273 (6%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ + L S + + L+ L ER+ A + ++++ + Sbjct: 416 LASGKGDAALGELRSIAASDEGVVADMALIN-----ALLQERKVEEALKAIDLLEKKRPA 470 Query: 153 REFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + D A++ +AL+I P + K A Sbjct: 471 DVLPVFLRGRALLLKQ--DTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + K + +L+ R+ AD+ ++ A++ I + Sbjct: 529 IEAAIKRDPGNVQAYMVLMELRAANGADRAELAGILRKAVDGAPSSP--IPRQLLV-DHY 585 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325 + + ++A + ++ P+ A ++ L + L R+ + +S Sbjct: 586 LRGGETKEALAVAQQAVAAL--PDNAQLFDALGRAQSANGEHNQALASFNRMAALQPQSP 643 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + ++ L G A A++I P Sbjct: 644 VPYLRMAGANLIAGDRTAAGQSWRKALEIDPTA 676 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 55/397 (13%), Positives = 121/397 (30%), Gaps = 26/397 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREF 155 + A+ + + L+ + + + + A L + + Sbjct: 146 GDEAKAQGSLGEALKAKADYAPALIE--QARSKVRGGDVDGALAGLGQIPRQSPVGAEAL 203 Query: 156 AVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + + S R D ++A AL++ P A+V+ + + + A L Sbjct: 204 KLRGDILLHSKR--DADAAMAAYRDALEVKPSYVEGQAAIVELLISQGKTTAAAESLQAL 261 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 +K A R L +++ KGD A+ + +++ S A A + + Sbjct: 262 EKAAP----GRPQTLYLQAMLAYTKGDFKAAQESVQKLVRMAPESARALELAGMTDLQLG 317 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES------- 327 +AE L K ++NP + +L R + ++ Sbjct: 318 ANAQAEASLAKALQLNP----GLAMARRGLVTSYMRLGRLDKAIATLPSDIDGNDRDPGM 373 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 L + + + G +D+A A ++ P + + S D L + Sbjct: 374 LGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALGELR--SI 431 Query: 388 AMPDPLWISDDGYLSS--VWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPA 445 A D ++D +++ + K + E K P + A Sbjct: 432 AASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLKQDTAGA 491 Query: 446 DDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIR 482 + P+ ++ +++ P D R Sbjct: 492 RKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 93/321 (28%), Gaps = 47/321 (14%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + AL + HN LA S+ + YL L A + Sbjct: 612 FDALGRAQSANGEHNQALA----SFNRMAALQPQSPVPYLRMAGANLIAGDRTAAGQSWR 667 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L+I T A L + A + P + ++ K W Sbjct: 668 KALEIDPTALEAQQGLVRLAMADRKSGDALAMSRTVQKQRPKEAAGYALEGEIHMAEKAW 727 Query: 205 SRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +AI K + + R +L+ A AD+ A ++ + Sbjct: 728 DKAIDVFRVGLKQVPASGELAVRLHEVLVTAGKKSEADRLAAEWQRSHAKDAT--FPLYL 785 Query: 261 MASICAAKSLIS---------QNKKRKAEVILEKIW------------------KVNP-H 292 AAK L + A + W + P Sbjct: 786 GTRALAAKDLPESLRQYERAVALQPNNAIALNNMAWIKGQLGRDGALADAERANALAPNQ 845 Query: 293 PEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 P + + LL + + RA R+ ++ + +E + ++KI ++ G D A A Sbjct: 846 PAFMDTWAMLL--SAASQHARAVDLQKRVVQLRPQQLEFKLNLAKIYIKAGQKDAAKAVL 903 Query: 349 MLAMKIAPRKEIFLLLAQIEQ 369 R F A++E+ Sbjct: 904 DELAAAGAR---FPAQAEVEE 921 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 120/330 (36%), Gaps = 40/330 (12%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAV 157 S + + L+ +A + + A E ++ ++++ + R + Sbjct: 249 GKTTAAAESLQALEKAAPGRPQTLYLQAMLAYTKGDFKAAQESVQKLVRMAPESARALEL 308 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL------ 211 + ++G A+ KAL ++P +V Y+ +AI L Sbjct: 309 AGMTD--LQLGANAQAEASLAKALQLNPGLAMARRGLVTSYMRLGRLDKAIATLPSDIDG 366 Query: 212 ---------------------NQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247 ++ ++ +R N A++ + ++ + G A+ Sbjct: 367 NDRDPGMLGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALG 426 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLS 304 + + S+ D ++A + +L+ + K +A ++ + K P P LL Sbjct: 427 E-LRSIAASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLK 485 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363 ++T G K R EI+ + +++ + D A A+ A+K P + +++ Sbjct: 486 QDTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARARIEAAIKRDPGNVQAYMV 545 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L ++ AN + ++ + A+ A P Sbjct: 546 LMELRAANGADRAELAGILRKAVDGAPSSP 575 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 89/274 (32%), Gaps = 17/274 (6%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIP 150 + +I + + A + + ++ + Q L+ A +L+ + P Sbjct: 1 MTAITSRTLVPAAALTVALLMSACGRDDPDALVASAQDYLSRNDAPAAIIQLKNALQSRP 60 Query: 151 ATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + + L ++ GD A+ KA D+ V + + ++++S+ Sbjct: 61 DSAKA--RLLLGQALLDTGDAQGAETEFRKAQDLGVPPAEVVPQLALALLRSRQYSK--- 115 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + +A L ++ +GD + E+LK + A I A+S Sbjct: 116 ITSDYAGQQLADAQAQASLQTTLAIAWQRQGDEAKAQGSLGEALKAKADYAPALIEQARS 175 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-------NTVGKLKRALRLEEINK 322 + A L +I + +P + L + + + E+ Sbjct: 176 KVRGGDVDGALAGLGQIPRQSP---VGAEALKLRGDILLHSKRDADAAMAAYRDALEVKP 232 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 VE + ++ + G A K AP Sbjct: 233 SYVEGQAAIVELLISQGKTTAAAESLQALEKAAP 266 >gi|271500232|ref|YP_003333257.1| tetratricopeptide domain-containing protein [Dickeya dadantii Ech586] gi|270343787|gb|ACZ76552.1| tetratricopeptide domain protein [Dickeya dadantii Ech586] Length = 389 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 92/290 (31%), Gaps = 54/290 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H +++ + E LL VQ + Y+ A E + ++ R Sbjct: 83 GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMVAGLYDRAEEIFKQLVDEEDFR 140 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ + ++Q + +W AI + Sbjct: 141 VSAL----------------------------------QQLLQIHQSTSDWPNAIDTAEK 166 Query: 214 KKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K + A ++L+ D+ + ++ SI + ++ Sbjct: 167 LVKLGKTQFRSEIAHFYCEQALQAMGSDDLDKALAMLKKASAADSQCARVSIMLGRIYMA 226 Query: 273 QNKKRKAEVILEKIWK------VNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESV 325 Q +A +L+++ + P + Y HL E L+R E S Sbjct: 227 QQNYTQAVTLLQQVLEQDTELVSETLPMLQECYRHLQQPEGWAAFLRRC---VEEKSGST 283 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373 + ++++ + + S + A ++ P +F L + +A Sbjct: 284 -ADLMMADVLEQYESTESAQTYVTRQLQRHPTMRVFHRLIDYHLREAEDG 332 >gi|209525407|ref|ZP_03273947.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209494087|gb|EDZ94402.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 370 Score = 53.4 bits (127), Expect = 8e-05, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 120/352 (34%), Gaps = 22/352 (6%) Query: 36 LYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSI 95 +++T+ ++ ++L ++ AV++ P +L + N ++ L G + Sbjct: 1 MFKTTKLLVSNVLLAIAATVFVVPAVAQ----PPQILAQATSQANINQLNDLLQKGRDLV 56 Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + N+ A ++ Q + + L VQ + A + + + Sbjct: 57 NSGNMDEALNVYLQAVQLDSSDAKIYSALAYVQA--LRGDFEAAAKFYRDAITLDPQNAD 114 Query: 156 AVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 Y L Y + +AQ Y +A + D + +++ AI Sbjct: 115 FYYGLGYTLARLQDYPAAAQAY-RRATQLQRDNINAHLGLAASLFRQQDYRGAIQAYQAA 173 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 A E N A + + +G+ S ++++L N + + + Q Sbjct: 174 L--ALEPNSWEAN--ASMGMAWLRQGNASQSLQFLQQAMELAPNQPNIYLKLGIAYLEQG 229 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + A ++ +++P +I I+ L EN G ++ + + + V + + Sbjct: 230 DRTAALDAFQEAARLSPFNGEIQFQIGEIFR--LQENFEGAMQAYQQALAMEPDLVAANM 287 Query: 330 IVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + +I L + A +A P +L LA E+ Sbjct: 288 AIGEIQLRLRDYIGAIVSFRRAADRFADQPSVHYYLGLALKERGGREPQAIA 339 >gi|296105261|ref|YP_003615407.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059720|gb|ADF64458.1| cellulose synthase subunit BcsC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 1160 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 77/209 (36%), Gaps = 17/209 (8%) Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL Q AL A + I + +AV L + D ++A+RY +AL Sbjct: 354 LLIQQGDAALKANNPAQAERYYQQARTIDNSDSYAVLGLGDAAAARKDNDAAERYYRQAL 413 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAKEWNRNRAIL---LIARSLE 235 + + Y +A I L+ ++ + + + R++ L A++ + Sbjct: 414 RMDSGNSNAVRGLANIYRAQSP-EKASQFIQSLSASQRRSID-DIERSLTNEQLSAQAEQ 471 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE 294 ++G + L L + + ++ L S ++ +A+ ++ ++ P P+ Sbjct: 472 LENQGKYAQAAEVQRRRLALSPGDVWITYRLSRDLYSAGQRSQADTLMRQLASQKPTDPD 531 Query: 295 IANIYTHLL----SENTVGKLKRALRLEE 319 +Y + L ++ L L Sbjct: 532 --QVYANGLYLSGNDQDRAALAHLETLPR 558 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 43/158 (27%), Gaps = 8/158 (5%) Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R ++ + + L A + A +LQ E A+ L Sbjct: 585 RDSGKEQEAENLLRQQPASTRIDLTLADWAQQRGDLSAAKTAYSGVLQREPQNEDAILGL 644 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWSRAITFLNQ--KK 215 GD ++A+ K P + + + A N + Sbjct: 645 TEIYSAQGDKDAARAELAKLPATQNGQPLSLNMQRRIAMAQAGLGDSAAAEKTFNSIIPQ 704 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 ++ + A++L + G + +++ Sbjct: 705 AKSQPASMENALVLRDAARFQTQNGQPQQALETYKDAM 742 Score = 36.5 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 106/333 (31%), Gaps = 29/333 (8%) Query: 69 PAMLFHMLHKRN---YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LV 122 PA + Y L G + A + A + + + + ++ L Sbjct: 368 PAQAERYYQQARTIDNSDSYAVLGLGDAAAARKDNDAAERYYRQALRMDSGNSNAVRGLA 427 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATK 179 + Q Q+ + + R L ++ + G A + Sbjct: 428 NIYRAQSPEKASQFIQSLSASQRRSIDDIERSLTNEQLSAQAEQLENQGKYAQAAEVQRR 487 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L +SP W+T + + A + S+A L ++ + K + ++ N Sbjct: 488 RLALSPGDVWITYRLSRDLYSAGQRSQA-DTLMRQLASQKPTDPDQVYANGLYLSGNDQD 546 Query: 240 GDMIASYHDAIESL------KLCDNSIMASIC-AAKSLISQNKKRKAEVILEKIWKVNPH 292 +A S +L D + A L K+++AE +L + P Sbjct: 547 RAALAHLETLPRSQWNGNIQELADRLQSNQVLDTANRLRDSGKEQEAENLL----RQQPA 602 Query: 293 P---EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 ++ + + + K + L+ ++ ++++ +++I G D A A+ Sbjct: 603 STRIDLTLADWAQQRGDLSAAKTAYSGVLQR-EPQNEDAILGLTEIYSAQGDKDAARAEL 661 Query: 349 MLAMKIAPRKEIFLLL---AQIEQANSHNTDKI 378 + + L + + QA ++ Sbjct: 662 AKLPATQNGQPLSLNMQRRIAMAQAGLGDSAAA 694 >gi|237756217|ref|ZP_04584781.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691627|gb|EEP60671.1| Tetratricopeptide repeat family protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 964 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 66/168 (39%), Gaps = 12/168 (7%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL +I + + + + E + + + L + GD + A Y + Sbjct: 777 LSKLLLAEIYEKQNDLDNSIKIYEELKENDDVKFK----LAKILLQKGDYDKALTYFKEL 832 Query: 181 LDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L+ P ++ + + Y L + A+++L K++ N N A + +K Sbjct: 833 LEKHPEKVNEISFYIGKTYYLMNDKKDAVSYLENGTKSS---NYNDAAVSYYLLGMIYNK 889 Query: 240 GDMIASYHDAIESLKLCDNSIMASIC----AAKSLISQNKKRKAEVIL 283 + + + + + L +S + AAK L+ K+++A +L Sbjct: 890 ENPNKALNYFLNGIYLYPSSKDITAKSRIEAAKILLKAEKRKEASCLL 937 >gi|125543209|gb|EAY89348.1| hypothetical protein OsI_10852 [Oryza sativa Indica Group] Length = 848 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 15/224 (6%) Query: 173 AQRYATKALDISPD----APWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A +A ++ P + + ++ AKE + L + + Sbjct: 293 ALSSFRRACELQPTDVRPHFRAGNCLYALGRHSEAKE--EYLLALEAAEAGGSQSADILP 350 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + +G ++ + E+ LC + A +L + R AE LE+ Sbjct: 351 QIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEA 410 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H ++ + H + ++ ++ + ++ V++L + + ++ G Sbjct: 411 IFLKPDYADAHCDLGSA-LHAIGDDDRA-VQEFQKAIDLKPGHVDALYNLGGLNMDAGRF 468 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +A + I P L + +++ + A Sbjct: 469 VRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 512 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 5/163 (3%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ A + L H + + + LL +Y A + LE + + Sbjct: 358 IAMEAEGMVLGACEHYREAAILCPSHARALKLLGS-ALFGVGEYRAAEKALEEAIFLKPD 416 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A L IGD + A + KA+D+ P + + A + RA Sbjct: 417 YADAHCDLGSALHAIGDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYT 476 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + N RA L +++ +G+ + E+ K+ Sbjct: 477 RVLSIRP--NHWRAQL--NKAVALLGQGESEEAKKALKEAFKM 515 >gi|227329221|ref|ZP_03833245.1| hypothetical protein PcarcW_18557 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 389 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 86/279 (30%), Gaps = 51/279 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H +++ + E LL VQ +A Y+ A E ++ R Sbjct: 83 GEVDRAIRIHQALTESASLTFEQ--RLLAVQQLGRDYMAAGLYDRAEESFNQLVDEEDFR 140 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ + ++Q + +W AI + Sbjct: 141 RSAL----------------------------------QQLLQIHQATSDWPTAIDVAEK 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L D+ + + ASI + ++ Sbjct: 167 LVKMGKDQLRVDIAHFYCELALLAMGSDDLDKALTLLKKGATADSQCARASIMMGRIYMA 226 Query: 273 QNKKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 Q +A L K P + Y HL + + R E N + Sbjct: 227 QQDYSRAVEALRQVLDQDKELVSETLPMLQECYQHL--DKPLDWANFLRRCVEENTGATA 284 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 L++V + E G+ + A A ++ P +F L+ Sbjct: 285 ELMLVDILEREEGA-EVAQAYINRQLQRHPTMRVFHRLM 322 >gi|115372553|ref|ZP_01459861.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|115370515|gb|EAU69442.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] Length = 1238 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 12/226 (5%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A A +A SP V ++ + + FL K + R R L Sbjct: 348 TATVEAERAARASPK--DVGLQLLAAANHRDDLNLRRHFLEAALKVEPDSLRVREKL--- 402 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++ ++ +S A + A++ + +A ++E+ ++ P Sbjct: 403 -AEHELERDHPERVLELLQPLVESAQDSASARLVLARAYEALGVSARANTLVEETFRRAP 461 Query: 292 H-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + P + A + + E L R + + S +++ +MG +D+A + Sbjct: 462 NVPRVVRAAVASSRKLERQQEVLDRLRVALALRFDDTASRNLLAAQLADMGRVDEAAREY 521 Query: 349 MLAMKIAPRKEIFLL-LAQIEQANSH-NTDKILYWTQSALHAMPDP 392 + + P + LA++ +N + K + AL A +P Sbjct: 522 SQLLALNPFDNAARVRLAELRASNGKLDAAKANFAEARAL-APDEP 566 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 1/108 (0%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 V+ F + LL Q+A R A E +++ P V L G Sbjct: 488 RVALALRFDDTASRNLLAAQLADMGRVDEAAREYSQLLALNPFDNAARVR-LAELRASNG 546 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L++A+ +A ++PD P V E + + A A+ + Sbjct: 547 KLDAAKANFAEARALAPDEPEVYEREGRALMSAGHRDEALAAFARSLA 594 >gi|170698737|ref|ZP_02889802.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria IOP40-10] gi|170136362|gb|EDT04625.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria IOP40-10] Length = 754 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 26/270 (9%) Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 +++ A E + + T + +C++G + +A+ + D Sbjct: 18 AGRFDDARVLYEAIRRDEPDQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 ++ + AI + A + A D GD A+ Sbjct: 73 VYLNN-LGNMLRAHGRLDDAIGAYRRAIALAPGY----AEAHSNLGNALRDAGDADAAML 127 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN------IYTH 301 ++L L + +L + + A EK ++P A + Sbjct: 128 SCAQALALRPDYAPGFNNLGNALQDKGELDAAVRAYEKAIALDPGYAQARFNQGNVLRAQ 187 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 ++ + + A+ L + + + + E ++ A A A + +F Sbjct: 188 RRPDDAIACYREAIAL---QPDLHAAHHALGVLLFERDDLEAAIASLTRAAESGEADCLF 244 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391 L A +E+A + + AL A PD Sbjct: 245 HLAAALERAGDLDGTVAS--LRRALVAAPD 272 >gi|16273142|ref|NP_439379.1| tetratricopeptide repeat protein [Haemophilus influenzae Rd KW20] gi|148827067|ref|YP_001291820.1| tetratricopeptide repeat protein [Haemophilus influenzae PittGG] gi|260581142|ref|ZP_05848962.1| conserved hypothetical protein [Haemophilus influenzae RdAW] gi|1175681|sp|P44130|Y1223_HAEIN RecName: Full=Uncharacterized protein HI_1223; Flags: Precursor gi|1574154|gb|AAC22876.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|148718309|gb|ABQ99436.1| hypothetical protein CGSHiGG_01890 [Haemophilus influenzae PittGG] gi|260092170|gb|EEW76113.1| conserved hypothetical protein [Haemophilus influenzae RdAW] Length = 396 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + ++K+ E A AK + P IF + QI+ A Sbjct: 292 ELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339 >gi|94311679|ref|YP_584889.1| HemY-like protein [Cupriavidus metallidurans CH34] gi|93355531|gb|ABF09620.1| uncharacterized enzyme of heme biosynthesis [Cupriavidus metallidurans CH34] Length = 396 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 51/388 (13%), Positives = 121/388 (31%), Gaps = 15/388 (3%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +RL+ + V+ + + +V + + S + L++L F + + Sbjct: 1 MRLLFWVAVLFGGAVGLALFTQFNQSNVVLFYPPYRVEMSLNLTLALLLLAFFIVWTVLS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P + K A+ + ++ A AR + Q Sbjct: 61 TFRHLSEMPKRAAAYRERSRMSKAQAAMRESIENLFAG--RFARAERAAHEAQAWPEQAQ 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ + A ++ + + P + + S+ D A + Sbjct: 119 TAALVGARAAHRMQESER-RDAWMAQVTDPEREQARLVSMAELLVDARDAEGALATIAQL 177 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENAD 238 + V ++ + K WS + +K L + ++ Sbjct: 178 QEKGGRQIHVQRIALRAHQHLKNWSEVLRLARSLEKRNALHPVLALRLKQMAVEAMLEER 237 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + D A +H +++ + A+ S +K+ +A I+E+ KVN + Sbjct: 238 RHDAEALFHFWRSLTADERHAVRIAELGARYFSSLDKQNEARRIVEEALKVNWDSRLVQR 297 Query: 299 YTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + ++++A + + + + + L +A + +K A R Sbjct: 298 YADCAEPGKALPQIQQAEKWLVDHPTDADLYYTLGVLCLGEQLWGKAQSNFERTLKYADR 357 Query: 358 -------KEIFLLLAQI-EQANSHNTDK 377 L LA++ E+ + + Sbjct: 358 DAQRRICIRAHLALARLFEETDRAEDAQ 385 >gi|229010927|ref|ZP_04168123.1| hypothetical protein bmyco0001_13810 [Bacillus mycoides DSM 2048] gi|229058255|ref|ZP_04196643.1| hypothetical protein bcere0026_13700 [Bacillus cereus AH603] gi|229132427|ref|ZP_04261281.1| hypothetical protein bcere0014_13630 [Bacillus cereus BDRD-ST196] gi|229166466|ref|ZP_04294222.1| hypothetical protein bcere0007_14380 [Bacillus cereus AH621] gi|228617040|gb|EEK74109.1| hypothetical protein bcere0007_14380 [Bacillus cereus AH621] gi|228651133|gb|EEL07114.1| hypothetical protein bcere0014_13630 [Bacillus cereus BDRD-ST196] gi|228720119|gb|EEL71703.1| hypothetical protein bcere0026_13700 [Bacillus cereus AH603] gi|228750327|gb|EEM00157.1| hypothetical protein bmyco0001_13810 [Bacillus mycoides DSM 2048] Length = 436 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 137 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 195 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 196 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 250 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 251 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 310 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340 +K L + LK A L+E K E L+ V + A++ G Sbjct: 311 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 355 Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 356 QLLWDLAFAKKQLEMYSDALKHYESAYT 383 >gi|149919802|ref|ZP_01908279.1| zinc finger/thioredoxin putative [Plesiocystis pacifica SIR-1] gi|149819409|gb|EDM78840.1| zinc finger/thioredoxin putative [Plesiocystis pacifica SIR-1] Length = 1419 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 91/305 (29%), Gaps = 36/305 (11%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+ + P ++ S + E + +E LA A K + P Sbjct: 721 LLHLRYGPDPERLQIASTALASYQGRPEPFIARIEGLGLLANGDTAGALAKFGG--EDPR 778 Query: 152 TREFAVYSLYFE--SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 ++ LY GD+ A+ A L + P+ V++ + A + Sbjct: 779 SQ------LYRAWVQLETGDVEGARATAEAVLTLRPEDRAAQLVVLEARLAANS-DDGLA 831 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC---- 265 L + A + R +L+ + + E E++ + A + Sbjct: 832 ALRKAANEAPDQLSLREVLMRSTAAEGLLA-----------EAVAAGKDLRPAVVSDGHK 880 Query: 266 ------AAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALR 316 A+ Q +A +LE+ + I + L + N Sbjct: 881 AELLRQRAQLSRRQGNIIEAVRLLEQALATDAGLLAARIDRVMIWLENANLPAAKAEVDV 940 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 LE+ E + + ++ L G +A + + A E + A+ + Sbjct: 941 LEQERPEDPAIIKLAARRDLAEGEFVRALERIGALGERA-DAEAMTIAAEAHALEKRVDE 999 Query: 377 KILYW 381 W Sbjct: 1000 ARQAW 1004 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 7/165 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKA 180 +LL + L + Y A +++ E V+ ++ G + A+ + KA Sbjct: 1199 AHLLLGRALLVQGDYVEALTEIQQAQTTEGDTEVEVW--LGQALEYNGRVPDAKGHYRKA 1256 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ D + + Y +AI L ++ ++ +A L + D G Sbjct: 1257 LELDGDNRMAAALLGRLYAYDGAARKAIELLTPVVADSDDYP----YAHLALGLAHRDLG 1312 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + D ++ +L N A + L +N+ A L+ Sbjct: 1313 KREQAIADFRKAHELDPNLFEAYYQEGRMLNDRNQHSAAAKALQA 1357 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 84/272 (30%), Gaps = 43/272 (15%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 LY + + ++ AR V + +LE ++A A Sbjct: 781 LYRAWVQLETGDVEGARATAEAVLTLRPEDRAAQLVVLEARLAANSDDGLAAL------- 833 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 KA + +PD + E +++ + A Sbjct: 834 ------------------------------RKAANEAPDQLSLREVLMRSTAAEGLLAEA 863 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + + A + ++A LL R+ + +G++I + ++L + A I Sbjct: 864 VAA-GKDLRPAVVSDGHKAELLRQRAQLSRRQGNIIEAVRLLEQALATDAGLLAARIDRV 922 Query: 268 KSLISQNKKRKAEV---ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 + A+ +LE+ +P L V L+R L E Sbjct: 923 MIWLENANLPAAKAEVDVLEQERPEDPAIIKLAARRDLAEGEFVRALERIGALGERA--D 980 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E++ I ++ +D+A A + P Sbjct: 981 AEAMTIAAEAHALEKRVDEARQAWAQARTLDP 1012 >gi|222149839|ref|YP_002550796.1| TPR repeat protein [Agrobacterium vitis S4] gi|221736821|gb|ACM37784.1| TPR repeat protein [Agrobacterium vitis S4] Length = 503 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 4/169 (2%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L++ + A +L+ + A+ L GDL + +AL Sbjct: 10 RLIQAFQLHKAGMLDEAIAHYRAILEEEPDQVDALRLLASAERSRGDLAQSLSLYARALR 69 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P+ + + A A+ + + A + A + +AD D Sbjct: 70 LAPEESDIWYNLGNALGEAGRKPDALEAYQRAAQLAPD----NAACHANIGVTHADLDDY 125 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A+ ++L L + +A +L + A +L K ++ P Sbjct: 126 PAAITAYRQALALDPQNRIALHNLGNALSELGEAEAAMALLSKALEIYP 174 >gi|157960199|ref|YP_001500233.1| HemY domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845199|gb|ABV85698.1| HemY domain protein [Shewanella pealeana ATCC 700345] Length = 389 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 69/414 (16%), Positives = 140/414 (33%), Gaps = 49/414 (11%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL--- 57 M+R + Y +I L +C + + + G+ TS F + L F L Sbjct: 1 MVRALVYLVIILLGLCISPFLVGSKGYLYLAIGDYQVETSIFFAVIALIIFYSLLQLVEF 60 Query: 58 -LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115 + + LS + K G +++A + A K M + Sbjct: 61 VVVWLLNMVLSSRYLPERWRKKAARKHTLL----GALALAEEDWLAAEKAMAKGAEK--- 113 Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFA---VYSLYFESCRIGDL 170 + LL A + + A ++ Q+ + L + GDL Sbjct: 114 -GEIPALNLLAAARAAHHQDNHQARDEYLAKAQLEPLAAKAVGTTRTRYLLQQ----GDL 168 Query: 171 NSAQRYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWN 222 +A+ + ++P P V + ++ Y ++W +A+ L ++K+ A + Sbjct: 169 IAAR---EELDKLNPTSKSKLP-VLKLAIELYQAQQDW-QALKLLLPIVSKKQILADDAL 223 Query: 223 RNRAI---LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + ++ L + A++ ++ +H + + I A L +K +A Sbjct: 224 QALSLKTNLALLTQAAKANEQELEKCWHWLSRAERKQAEYI---ALYAIGLSRFERKDEA 280 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +L K K + P I +L+ V K+ L LE + +V+ ++K+ + Sbjct: 281 VKMLLKQVKTSASPSIFKAVAEVLTPADVEAKKQLLALETQFENNVDYQTCLAKLYQQNH 340 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 QA A + K LA ++ AL + + Sbjct: 341 DYHQAKIWWQKACYLQDDKNSLHALADAQEHLGE--------LNRALQSRRNAA 386 >gi|157375432|ref|YP_001474032.1| hypothetical protein Ssed_2295 [Shewanella sediminis HAW-EB3] gi|157317806|gb|ABV36904.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 386 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 109/383 (28%), Gaps = 73/383 (19%) Query: 93 MSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IP 150 ++ R H S + +Y L L + + A + ML Sbjct: 11 IAAGYGWYMGRRSVRHKQSSDRKKLSRDYFTGL----NFLLSNESDKAVDLFISMLDVDD 66 Query: 151 AT--------REFAVYS-----------------LYFESCRI------GDLNSAQRY--A 177 T F L E I D +A Y A Sbjct: 67 DTIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPSLATEQRDIAMMELGKDYLAAGFYDRA 126 Query: 178 TKALDI---SPDAPWVTEA-VVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIAR 232 + D E ++ Y + KEW +AI + K+K N A Sbjct: 127 EEIFQNLVKQDDHSEAAETHLIDIYQVTKEWQKAINIIKSLKRKRQLVLKHNTAHFYCEL 186 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWK 288 + E AD G + AI K A + A+ + Q + K + +LE Sbjct: 187 ANEEADSGGQLKLLQAAI---KQDPQCGRAILTLAQKYLDQGELIKCKDMLYKLLEA--D 241 Query: 289 VNPHPEIANIYTHLLSENTV-----GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 V P+ E+ L+ L++ SV + +++ +E G Sbjct: 242 VELIPDALATCRQAYHESNDSTGYCDFLR--QALQQGAGASV--AITLAQHLIEQGETQA 297 Query: 344 AHAKAMLAMKIAPRKEIF-----LLLAQIEQANSHNTDKILYWTQSALHAMPDPLWIS-D 397 A + + P + F + + Q E + + +L P + + Sbjct: 298 AEKLVLDGLYRHPTMKSFQHLMQMQMLQAEDGQAKESLTMLEKLVQQQIKFR-PGYRCSE 356 Query: 398 DGYLSSV--WLPLSPISKTLCYF 418 G+ S W P K+ Sbjct: 357 CGFPSHSLYWH--CPSCKSWGSI 377 >gi|123444244|ref|YP_001008212.1| cellulose synthase subunit BcsC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122091205|emb|CAL14088.1| Probable BcsC protein involved in cellulose synthesis [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 1161 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138 GL A + A ++ + + L+ LL E AL + Sbjct: 314 GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKAGNTAL 373 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + QI + +A+ L + D +A+++ +AL + P + Y Sbjct: 374 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 433 Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A+ +LN Q+ K N + +L ++ A + + ++ Sbjct: 434 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAEMLAAQQQWHQAAEKYRQAQ 492 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 K+ N + + A++L +A+ Sbjct: 493 KMAPNDVWITYRLAQALAQDGHLAQADA 520 Score = 36.5 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 25/203 (12%), Positives = 50/203 (24%), Gaps = 15/203 (7%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 L +A + Q+ L + + A L Sbjct: 550 SQALAHLATLPAAQWNDNIRELDQRLKLDQ----VLTLARQLRENGDESGAITALRQQPA 605 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 L + GD + A + P P ++ Y+ S A Sbjct: 606 NTQIDLT----LADWALERGDYSEALAGYQRIRAREPQNPDARLGEIEAYIAEGRLSDAR 661 Query: 209 TFLNQKKKNAKEW---NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 L + + + R + + D+ A + K + A + Sbjct: 662 QHLQTEPLTGEGASLNTQRRVANAWSGVGDPQKAADIFQRLKPA--AAKGAPSQDNALVF 719 Query: 266 A--AKSLISQNKKRKAEVILEKI 286 A+ SQ + A+ ++ Sbjct: 720 RDSARLAQSQGQPVAAQDDFKQA 742 >gi|310819105|ref|YP_003951463.1| hypothetical protein STAUR_1832 [Stigmatella aurantiaca DW4/3-1] gi|309392177|gb|ADO69636.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 1222 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 12/226 (5%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A A +A SP V ++ + + FL K + R R L Sbjct: 332 TATVEAERAARASPK--DVGLQLLAAANHRDDLNLRRHFLEAALKVEPDSLRVREKL--- 386 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++ ++ +S A + A++ + +A ++E+ ++ P Sbjct: 387 -AEHELERDHPERVLELLQPLVESAQDSASARLVLARAYEALGVSARANTLVEETFRRAP 445 Query: 292 H-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + P + A + + E L R + + S +++ +MG +D+A + Sbjct: 446 NVPRVVRAAVASSRKLERQQEVLDRLRVALALRFDDTASRNLLAAQLADMGRVDEAAREY 505 Query: 349 MLAMKIAPRKEIFLL-LAQIEQANSH-NTDKILYWTQSALHAMPDP 392 + + P + LA++ +N + K + AL A +P Sbjct: 506 SQLLALNPFDNAARVRLAELRASNGKLDAAKANFAEARAL-APDEP 550 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 1/108 (0%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 V+ F + LL Q+A R A E +++ P V L G Sbjct: 472 RVALALRFDDTASRNLLAAQLADMGRVDEAAREYSQLLALNPFDNAARVR-LAELRASNG 530 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L++A+ +A ++PD P V E + + A A+ + Sbjct: 531 KLDAAKANFAEARALAPDEPEVYEREGRALMSAGHRDEALAAFARSLA 578 >gi|254723694|ref|ZP_05185480.1| TPR domain protein [Bacillus anthracis str. A1055] Length = 420 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLSEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|193669389|ref|XP_001951091.1| PREDICTED: pre-mRNA-processing factor 6-like [Acyrthosiphon pisum] Length = 930 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 37/211 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + + LE +LQ P + + GD+ +A+ + A Sbjct: 568 RAAYFEKNH-GTRDSLETLLQKAVAHCPKSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 625 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--------------RAIL 228 +P++ + A V+ E+ RA L++ + +A A+ Sbjct: 626 ANPNSEEIWLAAVKLESENSEFDRARRLLSKARASAPTPRVMMKSAKLEWCLNNLDTALQ 685 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 ++ +L +GD+ ++ +LK C +SI I A+ + Sbjct: 686 ILEEALVKFPDYAKLWLMKGQIEEQQGDVDRAHETFNSALKKCPSSIPLWIWLARLDERR 745 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLL 303 KA +LEK NPH PE+ + Sbjct: 746 KMLTKARSVLEKGRLKNPHNPELWLEAIRIE 776 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + ++ + Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKIQAARNVIMKGCEDNPKSEDLW- 335 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++++ S+ I AA KRK + K Sbjct: 336 -------LEAARLQPPETAKAVIAQAVRHIPTSVRIWIKAADLESETKGKRK---VYRKA 385 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SV+ + ++++ + + A Sbjct: 386 LEHIPNSVRLWKAAIELEDPEDARILLSRA---VECCPTSVDLWLALARL----ETYENA 438 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468 >gi|153840542|ref|ZP_01993209.1| HemY protein [Vibrio parahaemolyticus AQ3810] gi|149745796|gb|EDM56926.1| HemY protein [Vibrio parahaemolyticus AQ3810] Length = 311 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 91/291 (31%), Gaps = 14/291 (4%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G++ + + A K + + H L YL+ + A + + + Sbjct: 8 EGIIKLLEGDWKGAEKKVTRWANHH--DMPLLCYLVASEAAQGQGDKAK-RDHYLALASQ 64 Query: 150 PATREFAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 AV + R + +A P+ V + Y+ K W Sbjct: 65 QENAHLAVELTR--AKQFIRDNEFEAAFDTLQSLKGQYPNNSIVLNLLKTTYMQLKLWQP 122 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-----SLKLCDNSIM 261 I + Q K +A L+ + I + K+ ++ + Sbjct: 123 LIDLMPQLAKAKLVTEEEQAELIQKAQCGLLHEVAQQQGSEGLISHWNSLARKVKQDTHL 182 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 + A+ LI++ +A +L++ K P PE+ + L + + + + Sbjct: 183 IACF-ARDLIARKADTEAFTVLKEALKKQPEPELYQLLPDLNLPDIHPVVVFLEGVVKKE 241 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 ++ + ++ QA +A+K+ + LA + + Sbjct: 242 ADNAAAHSALAHFYFRQEKWQQAQEHFEIALKLRSDVSDYAFLADTLEKQN 292 >gi|228914194|ref|ZP_04077810.1| hypothetical protein bthur0012_14270 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845398|gb|EEM90433.1| hypothetical protein bthur0012_14270 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 434 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|85080749|ref|XP_956598.1| hypothetical protein NCU00213 [Neurospora crassa OR74A] gi|28917668|gb|EAA27362.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 820 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 95/289 (32%), Gaps = 30/289 (10%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-------FAVYS 159 +Y+S + + V + + Y A + + + I TR ++ Sbjct: 513 AAYMSLPRSHQDTPWVLAQMGRTQYEQANYAEAEKYFKRLRVIAPTRLEDMEVYSTVLWH 572 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E+ A + +D D+P A+ + LA + +A+ + + Sbjct: 573 LKKETELS-------FLAHEMIDSVWDSPEAWCALGNAWSLAYDHEQALRCFKRATQLDP 625 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ A + E+ + + + ++ A + KA Sbjct: 626 KF----AYAYTLQGHEHVENEEYDKALTAYRHAIAADKRHYNAYYGIGRVYEKLGNYDKA 681 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVS 332 ++P A+ + + + K+ + E+ + + + + Sbjct: 682 LSHYHAASVIHP----AHAVLICCIGSVLHRQKQFKQALPYFTKATELAPRAPDVRLKKA 737 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 + L+MG + A + M+ +AP R ++ LL ++ + + + Sbjct: 738 RALLQMGQLKAAQTELMILKDLAPDRAQVHFLLGKLSKTLHDKKSAVRH 786 >gi|307546941|ref|YP_003899420.1| hypothetical protein [Halomonas elongata DSM 2581] gi|307218965|emb|CBV44235.1| TPR domain protein [Halomonas elongata DSM 2581] Length = 1351 Score = 53.4 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 23/208 (11%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 LY ++A+ + PD+ + +A+ + A+ L++ Sbjct: 45 GLYEGKRLAEAESAARAMTER----YPDSAFAWKALGTTLLEDGRVEEALEHLHRAV--- 97 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + N + + L + + +GD + +++L + A A+ L S K + Sbjct: 98 -DINASDPLSLTSLAAVYYRQGDHDQAVRYQRRAVELQPDYAPAQYRLAEMLQSAGKHVQ 156 Query: 279 AEVILEKIWKVNPHPEIA-NIYTHLLSENTV--------GKLKRALRLEEINKESVESLV 329 A LE K E+ + + + ++ L +LE Sbjct: 157 A---LEHASKAR---ELGYDAFRSGVLVGSLLYQTKYFSQALDIYKQLERDYPGHAPIYN 210 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + ++G A + A++ P Sbjct: 211 NLGNLYKDIGQYQLAESYYQRALEERPD 238 Score = 36.5 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 16/204 (7%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 AR M LLE + + A E L + I A+ ++ SL Sbjct: 57 SAARAMTERYPDSAFAWKALGTTLLE------DGRVEEALEHLHRAVDINASDPLSLTSL 110 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 R GD + A RY +A+++ PD + + A + +A+ ++ ++ + Sbjct: 111 AAVYYRQGDHDQAVRYQRRAVELQPDYAPAQYRLAEMLQSAGKHVQALEHASKARELGYD 170 Query: 221 WNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 R+ ++ L+ ++ + D+ + + + Sbjct: 171 AFRSGVLVGSLLYQTKYFSQALDIYKQLE------RDYPGHAPIYNNLGNLYKDIGQYQL 224 Query: 279 AEVILEKIWKVNPHPEIANIYTHL 302 AE ++ + P+ Y+++ Sbjct: 225 AESYYQRALEER--PDYVMAYSNI 246 >gi|148547360|ref|YP_001267462.1| cellulose synthase subunit BcsC [Pseudomonas putida F1] gi|148511418|gb|ABQ78278.1| cellulose synthase operon C domain protein [Pseudomonas putida F1] Length = 1172 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 102/296 (34%), Gaps = 25/296 (8%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 L+ ++ Y L +S+A ++ A + + V + + + L+ V Sbjct: 371 RALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVRRMAPDNESAVRGLMRVYQ 430 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---------ESCRIGDLNSAQRYATKA 180 A + + A L+ + + ++ E+ + D ++A +A Sbjct: 431 AQSPGK---AQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEALQREDWSTASHVLGQA 487 Query: 181 LDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 ++PD PW+ + ++ E A L Q + + L + + Sbjct: 488 SALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQPRDPATRYAHGLFLESSDRDAL 547 Query: 238 D----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK----V 289 + A++ + +L+ M ++ +A+ L +Q + +A +LE Sbjct: 548 ALDSLRAVPQATWSADMHALEQRVQRRM-TLASAQQLQAQGRGAEATALLEAGLARGEGS 606 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + + + E+ + L ++ + V + A+ G++ QA Sbjct: 607 SDDLMLLADWAAARGEHGKARSYYQRVLVA-QPGRPDARLGVMESAVAEGNLQQAR 661 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 89/261 (34%), Gaps = 6/261 (2%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + AL + A Q E+A+ L S GD+ +A+R + Sbjct: 353 ALLKKAEQALEAKDVRGARALYRQARQQRPKDEYALLGLADVSLAEGDVAAAERQYLQVR 412 Query: 182 DISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL--ENA 237 ++PD +++ Y + + L +++ R L R E Sbjct: 413 RMAPDNESAVRGLMRVYQAQSPGKAQAYLDSLPPRQQAQFASLRRSLELARLRQQGDEAL 472 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + D + H ++ L + A SL Q + +A+ ++ + P + A Sbjct: 473 QREDWSTASHVLGQASALAPDEPWLVYQLANSLRHQGRTGEADAAFARLVQHQP-RDPAT 531 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y H L + + AL ++ S + + + A A+ + A Sbjct: 532 RYAHGLFLESSDRDALALDSLRAVPQATWSADMHALEQRVQRRMTLASAQQLQAQGRGA- 590 Query: 358 KEIFLLLAQIEQANSHNTDKI 378 + LL A + + + D + Sbjct: 591 EATALLEAGLARGEGSSDDLM 611 >gi|116751468|ref|YP_848155.1| sporulation domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700532|gb|ABK19720.1| Sporulation domain protein [Syntrophobacter fumaroxidans MPOB] Length = 538 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 76/243 (31%), Gaps = 18/243 (7%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 LA A + L Q +Y + A Y KAL PD P V Sbjct: 46 LAAGDSIQAVKYLTAAEQKTPKDPTLLYYIGVAYSGRNMHAEALSYYQKALAEKPDYPEV 105 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 A+ Y ++ +A + + A + L KGD A+ Sbjct: 106 YNAMGVLYAGRGQYDQAQAAFQKVLASPFYETPQFARYNLG--LVYEKKGDQQAALQQYQ 163 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-----LLSE 305 E+ +L ++ A L +Q + +A+ E + P++A + H + Sbjct: 164 EAARLQPTHALSHHRTAMILEAQGRAGEAQK--EFAMALQYSPDLAEAHMHYGILCFGTG 221 Query: 306 NTVGKLKRALRLEEINKESVES--------LVIVSK-IALEMGSIDQAHAKAMLAMKIAP 356 + + R+ + +VE+ + ++ A + + + P Sbjct: 222 DFDTAVHSFARVIRLMPNTVEADEARKYLDRIAAAQDAASRSMPFHPPERRVRMEVIPQP 281 Query: 357 RKE 359 + Sbjct: 282 DER 284 >gi|330823351|ref|YP_004386654.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus denitrificans K601] gi|329308723|gb|AEB83138.1| PEP-CTERM system TPR-repeat lipoprotein [Alicycliphilus denitrificans K601] Length = 926 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 85/273 (31%), Gaps = 19/273 (6%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ + L S + + L+ L ER+ A + ++++ + Sbjct: 416 LASGKGDAALGELRSIAASDEGVVADMALIN-----ALLQERKVEEALKAIDLLEKKRPA 470 Query: 153 REFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + D A++ +AL+I P + K A Sbjct: 471 DVLPVFLRGRALLLKQ--DTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + K + +L+ R+ AD+ ++ A++ I + Sbjct: 529 IEAAIKRDPGNVQAYMVLMELRAANGADRAELAGILRKAVDGAPSSP--IPRQLLV-DHY 585 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325 + + ++A + ++ P+ A ++ L + L R+ + +S Sbjct: 586 LRGGETKEALAVAQQAVAAL--PDNAQLFDALGRAQSANGEHNQALASFNRMAALQPQSP 643 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + ++ L G A A++I P Sbjct: 644 VPYLRMAGANLIAGDRTAAGQSWRKALEIDPTA 676 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 92/321 (28%), Gaps = 47/321 (14%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + AL + HN LA Q + YL L A + Sbjct: 612 FDALGRAQSANGEHNQALASFNRMAALQ----PQSPVPYLRMAGANLIAGDRTAAGQSWR 667 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L+I T A L + A + P + +V K W Sbjct: 668 KALEIDPTALEAQQGLVRLAMADRKSGDALAMSRTVQKQRPKEAAGYALEGEIHVADKAW 727 Query: 205 SRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +AI K + + R +L+ A AD+ A ++ + Sbjct: 728 DKAIDVFRAGLKQVPASGELAVRLHEVLVTAGKKSEADRLATEWQRSHAKDAT--FPLYL 785 Query: 261 MASICAAKSLIS---------QNKKRKAEVILEKIW------------------KVNP-H 292 AAK L + A + W + P Sbjct: 786 GTRALAAKDLPESLRQYERAVALQPNNAIALNNMAWIKGQLGRDGALADAERANALAPNQ 845 Query: 293 PEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 P + + LL + + RA R+ ++ + +E + ++KI ++ G D A A Sbjct: 846 PAFMDTWAMLL--SAASQHARAVDLQKRVVQLRPQQLEFKLNLAKIYIKAGQKDAAKAVL 903 Query: 349 MLAMKIAPRKEIFLLLAQIEQ 369 R F A++E+ Sbjct: 904 DELAAAGAR---FPAQAEVEE 921 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 56/399 (14%), Positives = 121/399 (30%), Gaps = 30/399 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA- 156 + A+ + + L+ + + + + A + QIP Sbjct: 146 GDEAKAQGSLDEALKAKADYAPALIE--QARSKVRGGDVDGALAG---LGQIPRQSSVGA 200 Query: 157 ----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + D ++A AL++ P A+V+ + + + A L Sbjct: 201 EALKLRGDILLHNKR-DADAAMAAYRDALEVKPSYVEGQAAIVELLIFQGKTTAAAESLQ 259 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 +K A R L +++ KGD A+ + + +++ S A A + + Sbjct: 260 ALEKAAP----GRPQTLYLQAMLAYTKGDFKAAQENVQKLVRMAPESARALELAGMTDLQ 315 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES----- 327 +AE L K ++NP T +L R + ++ Sbjct: 316 LGANAQAEASLAKALQLNP----GLAMARRGLVTTYMRLGRLDKAIATLPSDIDGNDRDP 371 Query: 328 --LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 L + + + G +D+A A ++ P + + S D L + Sbjct: 372 GMLGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALGELR-- 429 Query: 386 LHAMPDPLWISDDGYLSS--VWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAY 443 A D ++D +++ + K + E K P + Sbjct: 430 SIAASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLKQDTA 489 Query: 444 PADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIR 482 A + P+ ++ +++ P D R Sbjct: 490 GARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARAR 528 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 51/330 (15%), Positives = 120/330 (36%), Gaps = 40/330 (12%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAV 157 S + + L+ +A + + A E ++ ++++ + R + Sbjct: 249 GKTTAAAESLQALEKAAPGRPQTLYLQAMLAYTKGDFKAAQENVQKLVRMAPESARALEL 308 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL------ 211 + ++G A+ KAL ++P +V Y+ +AI L Sbjct: 309 AGMTD--LQLGANAQAEASLAKALQLNPGLAMARRGLVTTYMRLGRLDKAIATLPSDIDG 366 Query: 212 ---------------------NQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYH 247 ++ ++ +R N A++ + ++ + G A+ Sbjct: 367 NDRDPGMLGLAGQAYMLQGDVDRAQRYFARASRLVPNDAVMRTSLAVSHLASGKGDAALG 426 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLS 304 + + S+ D ++A + +L+ + K +A ++ + K P P LL Sbjct: 427 E-LRSIAASDEGVVADMALINALLQERKVEEALKAIDLLEKKRPADVLPVFLRGRALLLK 485 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLL 363 ++T G K R EI+ + +++ + D A A+ A+K P + +++ Sbjct: 486 QDTAGARKAMERALEIDPGYFPAAGVLAVLDNAEKRPDDARARIEAAIKRDPGNVQAYMV 545 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 L ++ AN + ++ + A+ A P Sbjct: 546 LMELRAANGADRAELAGILRKAVDGAPSSP 575 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 89/274 (32%), Gaps = 17/274 (6%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIP 150 + +I + + A + + ++ + Q L+ A +L+ + P Sbjct: 1 MTAITSRTLVPAAALTVALLMSACGRDDPDALVASAQDYLSRNDAPAAIIQLKNALQSRP 60 Query: 151 ATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + + L ++ GD A+ KA D+ V + + ++++S+ + Sbjct: 61 DSAKA--RLLLGQALLDTGDAQGAETEFRKAQDLGVPPAEVVPQLALALLRSRQYSKITS 118 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 ++ + A L ++ +GD + E+LK + A I A+S Sbjct: 119 DYAGQRLADAQAQ---ANLQTTLAIAWQRQGDEAKAQGSLDEALKAKADYAPALIEQARS 175 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-------NTVGKLKRALRLEEINK 322 + A L +I + + + L + + + E+ Sbjct: 176 KVRGGDVDGALAGLGQIPRQS---SVGAEALKLRGDILLHNKRDADAAMAAYRDALEVKP 232 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 VE + ++ + G A K AP Sbjct: 233 SYVEGQAAIVELLIFQGKTTAAAESLQALEKAAP 266 >gi|328777929|ref|XP_003249419.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform 1 [Apis mellifera] Length = 1065 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 103/303 (33%), Gaps = 31/303 (10%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 126 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 183 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L G++ A + K Sbjct: 184 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 235 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 236 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 291 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + +++L N A A +L + + +AE ++ P H + N Sbjct: 292 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEDCYNTALRLCPSHADSLNN 351 Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E +L LE E + ++ + + G +++A A++I Sbjct: 352 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRI 409 Query: 355 APR 357 P Sbjct: 410 QPT 412 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 326 GQVVEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 382 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 383 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 442 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 443 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 492 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 83/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 261 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 320 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + + A L + ++G + + +++L++ Sbjct: 321 ALKEKGQVVEAEDCYNTALRLCP----SHADSLNNLANIKREQGYIEEATRLYLKALEVF 376 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 377 PEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 434 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 435 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 480 >gi|318607908|emb|CBY29406.1| cellulose synthase operon protein C [Yersinia enterocolitica subsp. palearctica Y11] Length = 901 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138 GL A + A ++ + + L+ LL E AL + Sbjct: 47 GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTAL 106 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + QI + +A+ L + D +A+++ +AL + P + Y Sbjct: 107 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 166 Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A+ +LN Q+ K N + +L ++ A + + ++ Sbjct: 167 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAETLAAQQQWHQAAEKYRQAQ 225 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 K+ N + + A++L +A+ Sbjct: 226 KMAPNDVWITYRLAQALAQDGHLAQADA 253 >gi|171057456|ref|YP_001789805.1| HemY domain-containing protein [Leptothrix cholodnii SP-6] gi|170774901|gb|ACB33040.1| HemY domain protein [Leptothrix cholodnii SP-6] Length = 415 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 53/396 (13%), Positives = 99/396 (25%), Gaps = 30/396 (7%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 + VSI W S + +L A + + P +R Sbjct: 21 LGANDGVVSIYWSPWRVDLSLNFFVLLLLASGAAVYIAVGSINRLVGLPERARLWRLQRR 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE--------YLVYLLEVQIA-L 131 AL L + + A K + E L +LL Sbjct: 81 ERAAQMALRESLGLLFSGRYSRAHKAAQRALEIRALTTELTADVEFGALAHLLAASSLHR 140 Query: 132 AERQYNIAHEKLEM--MLQIP--ATREF-AVYSLYFE-SCRIGDLNSA-QRYATKALDIS 184 + + + ML P T L E + D + A ++ A ++ Sbjct: 141 LQDRTRRDEQLGRALGMLGAPALPTPVAEGARLLATEWAIDDRDPDRAFEQLAQLPAGVA 200 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 +Q L+++ A+ K+ +L + ++E D Sbjct: 201 RRTQ-ALRLRLQAARLSRQPLEALKTARLLAKHQGFAPVAAHGILRSLAIEVLDTARDAD 259 Query: 245 SYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIAN 297 L D + AA + L W+ + Sbjct: 260 QLRRIWLQLDPADRRDPVVTARAASLAAELDAVTDGRGWLRPHWEHIHQLGERERAAVLR 319 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356 + +L L + + E +A +A A Sbjct: 320 AFVDVLPGLPADWLPLLEDAVAAQPQDAPLAYAAGRAMAERQLWGRARRLLEVAASNASA 379 Query: 357 ----RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R++ + L QI + D+ + A +A Sbjct: 380 ELGLRQDAWRWLGQIADQE-GDEDQAQRCYRKAANA 414 >gi|52076018|dbj|BAD46471.1| hypothetical protein [Oryza sativa Japonica Group] Length = 1119 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 63/177 (35%), Gaps = 15/177 (8%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKK 216 ++ + D +A++ + S EA++ + + A L K Sbjct: 3 RG-ASQAQQRKDAEAAEQLDRLMREASSPRKEAREALLLDRSRRHDEAIARVDELAAKHP 61 Query: 217 NAKEWNRNRAILL---IARSLENAD----KGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + +L +R++ D + + I++ +L N + ++ A + Sbjct: 62 ESAAVAHLAGLLHYHATSRAMAAKDRQGVEAHCNTARDFYIKAKRLAPNCVEIAVRLALA 121 Query: 270 LISQNKKRKAEVILEKIWKVNPHP-EIAN---IYTHLLS-ENTVGKLKRALRLEEIN 321 + +AE +E+ P P + A Y + L ++ ++++A R+ Sbjct: 122 RLRCFNDGEAEPEIERA-LAIPFPTDPAENNVAYDNALGTTSSRDRVEKARRVALAR 177 >gi|74316213|ref|YP_313953.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC 25259] gi|74055708|gb|AAZ96148.1| TPR repeat [Thiobacillus denitrificans ATCC 25259] Length = 931 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 87/254 (34%), Gaps = 10/254 (3%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + ALA A + LE L++ R L D A +KA+ I P+ Sbjct: 177 RCALATGDAAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNN 236 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +++V +V A + RA +L +K A + R + + + Sbjct: 237 LDALQSLVAIHVKAGDTQRAREYLAVIRKLAPKSTR----AHYLEASIAYSEKKFAEANA 292 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 E+LK+ + + + + A S + ++AE ++ P + Sbjct: 293 AIQEALKVSPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKS 352 Query: 308 VGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIF 361 K + L + L + + + G+ QA A A+ + P Sbjct: 353 KQFDKALVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQ 412 Query: 362 LLLAQIEQANSHNT 375 L L+Q+ N+ + Sbjct: 413 LGLSQLAAGNTQDA 426 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 89/256 (34%), Gaps = 41/256 (16%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + + + Q ++ L Q L + A E L A AV SL Sbjct: 458 RALAALATLQKKGDASAKIHHLAGQAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQL 517 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 ++A+ +AL ++ Sbjct: 518 DVAENKADAARMRLERALAQ--------------------------------------DK 539 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 NR ++A S A G AS ++ + +I I + +++N+ +KA + Sbjct: 540 NRVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELVRHYLARNEGQKALALA 599 Query: 284 EKIWKVNP-HPEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + + NP HP N+ L ++ RL ++S E V ++++ L G Sbjct: 600 NEAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRETRQSPEGFVRLAQVQLADGK 659 Query: 341 IDQAHAKAMLAMKIAP 356 +D+A + A+++AP Sbjct: 660 LDEARRNLLHALELAP 675 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 81/301 (26%), Gaps = 14/301 (4%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 SIA A + + +L A A Y A + L Sbjct: 279 SIAYSEKKFAEANAAIQEALKVSPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGH 338 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV--QQYVLAKEWSRAITFL 211 + L + + A T A ++P + + + S+A Sbjct: 339 AEGLKMLATTQIKSKQFDKA--LVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALF 396 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + R L G+ + + ++ + S ++ A L Sbjct: 397 ERALALEPGNVTIR----TQLGLSQLAAGNTQDAIDELTDASQHSSGSQADTLLAVAYLS 452 Query: 272 SQNKKRK--AEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 ++ R A L+K + H Y ++ + L + Sbjct: 453 RKDYDRALAALATLQKKGDASAKIHHLAGQAYLG-KNDKLAARRNFEQALAADAAFFP-A 510 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + ++++ + D A + A+ + +L A + + W + A Sbjct: 511 VASLAQLDVAENKADAARMRLERALAQDKNRVAAMLALSRMAARNGQEQASIDWLEKAAR 570 Query: 388 A 388 A Sbjct: 571 A 571 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 95/280 (33%), Gaps = 21/280 (7%) Query: 122 VYLLEVQIALAERQYNIA----HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 + L + L +R+ A + + P T + L + GD A+ + Sbjct: 137 ILQLRGEALLNQRKLEEACNLFQQSYDASPGNPPT----YWGLSRCALATGDAAKARDWL 192 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +AL + + + K+ ++A+ ++ K E N A L + + Sbjct: 193 ERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVK--IEPNNLDA--LQSLVAIHV 248 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H-PE- 294 GD + KL S A A S+ K +A +++ KV+P H P Sbjct: 249 KAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKVSPDHVPSL 308 Query: 295 -IANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +A + H L + KR L E L +++ ++ D+A Sbjct: 309 MLAGMSAHALGSYQEAETYFKRFLLRV---PGHAEGLKMLATTQIKSKQFDKALVTLAPF 365 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + R L LA Q + N + + AL P Sbjct: 366 LAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPG 405 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 52/421 (12%), Positives = 113/421 (26%), Gaps = 47/421 (11%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 ++A + AR H ++ + LA + A ++I Sbjct: 179 ALATGDAAKAR--DWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNN 236 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ SL + GD A+ Y ++P + K+++ A + + Sbjct: 237 LDALQSLVAIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQE 296 Query: 214 KKKNAKEWNRNRAIL-LIARSLENADK-------------GDMIASYHDAIESLK----- 254 K + + + + + A +L + + G A +K Sbjct: 297 ALKVSPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFD 356 Query: 255 -----LCDNSIMAS------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 L A ++ ++ +A + E+ + P L Sbjct: 357 KALVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQLGLS 416 Query: 304 SENTVGKLKRALRL--EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L + ++ +++ L D+A A K Sbjct: 417 QLAAGNTQDAIDELTDASQHSSGSQADTLLAVAYLSRKDYDRALAALATLQKKGDASAKI 476 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWK 421 LA ++ + AL A + + P L E K Sbjct: 477 HHLAGQAYLGKNDKLAARRNFEQALAAD-------------AAFFPAVASLAQLDVAENK 523 Query: 422 IPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI 481 + + + A A + N ++ + ++K + + I P + Sbjct: 524 ADAARMRLERALAQDKNRVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELV 583 Query: 482 R 482 R Sbjct: 584 R 584 >gi|119510182|ref|ZP_01629320.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414] gi|119465132|gb|EAW46031.1| hypothetical protein N9414_10368 [Nodularia spumigena CCY9414] Length = 304 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 62/209 (29%), Gaps = 16/209 (7%) Query: 88 LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 L GL +I A + A + + + + L L Q A + Sbjct: 47 LNQGLQAIQAGRLQDAIAAFQQATQLDPNLATAHYNLGLALR-QTGKL---KPAADAFYQ 102 Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 P + E L A Y +A+++ P + + + Sbjct: 103 ATQADPQFAPAFANLGGALLEGSN---LQQASDYLERAIELDPKLGFAHYNLGLVRQQQQ 159 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 +W RAI + + +K L + +G + + +++K A Sbjct: 160 DWERAIASFKKAMEYSKNAPEPPYHLGTSY----LQQGKVNQARDAFFQAIKNNPQYPEA 215 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291 +Q + ++A K + NP Sbjct: 216 HYNLGMIWFNQGQLKEALAAFRKSAEANP 244 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 56/181 (30%), Gaps = 13/181 (7%) Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + W+ + + AI Q + A L G Sbjct: 38 YSLPTSTTWLNQGLQAIQA--GRLQDAIAAFQQATQLDPNL----ATAHYNLGLALRQTG 91 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEI 295 + + ++ + A +L+ + ++A LE+ +++P H + Sbjct: 92 KLKPAADAFYQATQADPQFAPAFANLGGALLEGSNLQQASDYLERAIELDPKLGFAHYNL 151 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++ + + E +K + E + L+ G ++QA A+K Sbjct: 152 GLV--RQQQQDWERAIASFKKAMEYSKNAPEPPYHLGTSYLQQGKVNQARDAFFQAIKNN 209 Query: 356 P 356 P Sbjct: 210 P 210 >gi|39997085|ref|NP_953036.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39983975|gb|AAR35363.1| TPR domain protein [Geobacter sulfurreducens PCA] Length = 864 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 91/286 (31%), Gaps = 32/286 (11%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 H + + D+ L GL + L M A+ Sbjct: 411 HYMRQHRSDRALATLKEGLTGT-KGDASLYNTM----------------------AAIMF 447 Query: 134 RQYNIAHE-KLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A K M + +L GDL+ A ++ + P Sbjct: 448 NERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDGAIAEYSRMVQEYPHNLRAI 507 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + L S A+ + + + + ++ + + KG++ + + Sbjct: 508 LGLASLSELKGRESDALAWYTKARDTGEYAG------YLSLAGYHEKKGNLDKALAVLDD 561 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGK 310 ++K + A + + L++Q K + A + + + P +A + + + + Sbjct: 562 AVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKA 621 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ A R + + I++ + E G + +A + ++ P Sbjct: 622 IEEARRAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEP 667 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 77/235 (32%), Gaps = 7/235 (2%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A +Y A ++ +L+ ++ V L + A A K L +P Sbjct: 34 AKAYQALGKYEQAEKEYLKVLKQNPSKTDIVLELAKLYNSQRKPDQAVEQAGKYLQSNPG 93 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + E + Y L + A + KE R A L +A L + Sbjct: 94 SAEALEVLGLGYALKGMPAEAERNFLLALE--KEPRRTSAKLQLAVLLMEQKSSREKEAR 151 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----L 302 E L ++ A A +S + +A I K+ + P + A +Y L Sbjct: 152 ALIDEILTADPGNVKAHNLLASYELSLGNREQALEIYRKVAALTPG-DPAPLYRQGVILL 210 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 K A L + + E + IA + + A ++KIAP Sbjct: 211 EKGEMDKAEKTAETLVQKFPQKSEGARLKGLIAYQRKNYADAITALQTSVKIAPS 265 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 98/303 (32%), Gaps = 44/303 (14%) Query: 69 PAMLFHMLHKRN----YDKGYKAL-----------YTGL---MSIAAHNIPLARKMHSYV 110 P + K KG A+ GL ++ A+ + Sbjct: 567 PRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAPEQGLALKVAAFVQMKESAKAIEEAR 626 Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + + + A ++++ L+ A L R G+ Sbjct: 627 RAVTLKPGAAFGHSILASVYAEQGDLPRAIQEVKAGLRAEPGNIGAAMQLGEYLGRSGNT 686 Query: 171 NSAQRYATKALDISPDAP---WVTEAVVQQYVLAKEW-SRAITFLNQKKKNAKEWNRNRA 226 +A L +P+ + +++ +E ++ L + + A N Sbjct: 687 AAAMAQYEAVLRNNPNHAPALFAQGMLLEMGGKKREAVTKYRQTLEKAESFAPALNN--- 743 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + G + A+ +LK + + +L+ + +A ILEK+ Sbjct: 744 -LAFLYAEGY---GPREEALRMALTALKQEPANAAIADTYGYALVKNGRAGEAVKILEKV 799 Query: 287 WKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEI--NKESVES---LVIVSKIAL 336 K+ P +P +A Y +T + + A L+E + ES +++++++ Sbjct: 800 VKLMPSNPAVRYHLALAYR-----DTGDRARAATTLQEALNQGDFPESGQARIMLAELSG 854 Query: 337 EMG 339 G Sbjct: 855 AAG 857 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 10/229 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G + A+ T A+ ++P+ + Y+ RA+ L K + Sbjct: 379 LSKGRVREAESDFTTAVRVAPEMLNSRLVLAFHYMRQHRSDRALATL----KEGLTGTKG 434 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + ++ + + K + A A S A Sbjct: 435 DASLYNTMAAIMFNERKPAEAVKYLNMARKSDPAFLPARFNLATYHASTGDLDGAIAEYS 494 Query: 285 KIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ + PH + L L + + + ++ + G++ Sbjct: 495 RMVQEYPHNLRAILGLASLSELKGRESDALAWYTK--ARDTGEYAGYLSLAGYHEKKGNL 552 Query: 342 DQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDKILYWTQSALHAM 389 D+A A A+K PR ++ +I A D I +T A Sbjct: 553 DKALAVLDDAVKAKPRAAEAFVMKGRILLAQKKGKDAIRVFTDLESIAP 601 >gi|319776108|ref|YP_004138596.1| hypothetical protein HICON_14570 [Haemophilus influenzae F3047] gi|329123272|ref|ZP_08251840.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus aegyptius ATCC 11116] gi|317450699|emb|CBY86919.1| conserved hypothetical protein [Haemophilus influenzae F3047] gi|327471481|gb|EGF16929.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus aegyptius ATCC 11116] Length = 396 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + ++K+ E A AK + P IF + QI+ A Sbjct: 292 ELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339 >gi|257094833|ref|YP_003168474.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047357|gb|ACV36545.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 929 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 94/311 (30%), Gaps = 19/311 (6%) Query: 92 LMSIAA------HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 ++++A + A + + + L + LA+ ++A LE Sbjct: 375 MLALAGQVFMQNGQVDKAGTYFAKAAALDPKNTGKRTSL--AMVNLAKGDSDVAFRDLEQ 432 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + + +L + + + A + PD P + ++ + Sbjct: 433 VAAADTGNRADL-ALIAAHLQRREFDQALKAIASLEKKQPDNPLTHNLRGTALLGKRDMA 491 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A ++ + A L + + + + L SI A + Sbjct: 492 GARKSFDKAVALNPAYFPAAANL----ANLDLAEKKPDEARKRFEAVLAKDPKSIQALLA 547 Query: 266 AAKSLISQNK-KRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEIN 321 A+ + ++ K NP P +A I +L L A Sbjct: 548 LAQMRAKAGGSTEEVASLINKAVTANPTELAPRLALIGLYLGKNEVKSALSAAQDAVAAL 607 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 + E L ++ G +QA A + P + +L +A++E A + Sbjct: 608 PDKPEILDAAGRVQQAAGDFNQALATYGKLAALKPDSQLAYLRMAEVEVAAKNKDG-ARQ 666 Query: 381 WTQSALHAMPD 391 Q AL PD Sbjct: 667 SLQKALKVKPD 677 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 81/268 (30%), Gaps = 34/268 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 L++ + + + S + + L + L L +R A + + + + Sbjct: 445 ALIAAHLQRREFDQALKAIASLEKKQPDNPLTHNLRGTALLGKRDMAGARKSFDKAVALN 504 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A +L + A++ L P + A+ Q A + + Sbjct: 505 PAYFPAAANLANLDLAEKKPDEARKRFEAVLAKDPKSIQALLALAQMRAKAGGSTEEVAS 564 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L K A + LI L + +++ DA+ +L + L Sbjct: 565 LINKAVTANPTELAPRLALIGLYLGKNEVKSALSAAQDAVAALPDKP----------EIL 614 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + + ++A + L +L + +S + + Sbjct: 615 DAAGRVQQAA------------------------GDFNQALATYGKLAALKPDSQLAYLR 650 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++++ + + D A A+K+ P Sbjct: 651 MAEVEVAAKNKDGARQSLQKALKVKPDS 678 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 41/339 (12%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A+ GL++ L + + + N L +A ++ Y +A E + M Sbjct: 242 AIIRGLLA----EGKLDEAVKQLDAMKKVSANHPQTQYLRAMVAYQQKNYPVAREAVLQM 297 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L+ + + + A+ Y KAL +P+ ++ Y+ + + Sbjct: 298 LKAAPESPYGLQLAGLIEYELKAYPQAEAYLQKALPRTPELGIARRVLIASYLRDGQPGK 357 Query: 207 AITFLN----------------------QKKKNAKEWNRNRAILL--------IARSLEN 236 A+ + + + +A L + ++ N Sbjct: 358 AMNVIEPVLDKIDKDSNMLALAGQVFMQNGQVDKAGTYFAKAAALDPKNTGKRTSLAMVN 417 Query: 237 ADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP--H 292 KGD ++ D + + N ++ AA + ++ KA LEK NP H Sbjct: 418 LAKGDSDVAFRDLEQVAAADTGNRADLALIAAHLQRREFDQALKAIASLEKKQPDNPLTH 477 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + + K + +N + ++ + L D+A + + Sbjct: 478 -NLRGTALLGKRDMAGAR-KSFDKAVALNPAYFPAAANLANLDLAEKKPDEARKRFEAVL 535 Query: 353 KIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 P + L LAQ+ +T+++ A+ A P Sbjct: 536 AKDPKSIQALLALAQMRAKAGGSTEEVASLINKAVTANP 574 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 88/292 (30%), Gaps = 35/292 (11%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 AA + A + ++ + L YL ++ +A + + A + L+ L++ Sbjct: 623 AAGDFNQALATYGKLAALK--PDSQLAYLRMAEVEVAAKNKDGARQSLQKALKVKPDSLE 680 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A + G L A A P K W+ A++ Sbjct: 681 AQRGIIMLDLDAGRLTDALTVARDVQKQRPKEAIGYIFEGDAQASKKAWAEAVSAYRAGL 740 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL----KLCDNSIMAS------IC 265 K+A A L L + G+ ++ + ++ Sbjct: 741 KSAPADGGELAPKLHWALLAGGNAGEADKFAETWLKDHPKDGRFRLYLAESASGRKDYAG 800 Query: 266 AAKSLIS------------------QNKKR--KAEVILEKIWKVNP-HPEIANIYTHLL- 303 AA+ + + + KA EK K+ P P + + LL Sbjct: 801 AARQYRALLETQANNPAVLNNLAWVAGQLKDPKAIEYAEKANKLAPNQPALMDTLATLLV 860 Query: 304 -SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +T L R E ++ + +K ++ G ++A + K+ Sbjct: 861 DKGDTARGLDLFKRALETAPQAAAIRLNYAKALIKAGQKNEAKNELEQIAKL 912 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 102/312 (32%), Gaps = 46/312 (14%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIG-DLNSAQRYA 177 L + LA+ + A +L+ + + P E L ++ G D A+ Sbjct: 32 PEAMLASAREYLAKHDHKAAAIQLKNALQKNPELAEA--RFLLGKALLDGSDPTGAEIEF 89 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +AL+ A VT + + ++ + + I + + ++ E RA L A Sbjct: 90 RRALEFKYPADQVTPLLARSMLMRGQADKVIKEFGKAELSSPEA---RADLQTALGQAYL 146 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----------KIW 287 + + +L A + A+ + A +L+ + W Sbjct: 147 MQSKPDLAEAAFAAALLAQPGYPSALMGQARMKAGRGDLPGAVALLDVSLEKSPKLYEAW 206 Query: 288 KV-----NPHPEIANIYT-----------HLLSENTVGK-----------LKRALRLEEI 320 ++ + A +L + + + + +K+ ++++ Sbjct: 207 QLKGDLLAAQGDSAGAMVAYRKGLEIKPDNLSAHSAIIRGLLAEGKLDEAVKQLDAMKKV 266 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++ + + +A + + A + +K AP L LA + + + Sbjct: 267 SANHPQTQYLRAMVAYQQKNYPVAREAVLQMLKAAPESPYGLQLAGLIEYELKAYPQAEA 326 Query: 381 WTQSALHAMPDP 392 + Q AL P Sbjct: 327 YLQKAL--PRTP 336 >gi|254498586|ref|ZP_05111306.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254352177|gb|EET10992.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 564 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 75/238 (31%), Gaps = 47/238 (19%) Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA----TREFAVYSLYFESCRIGDLNSAQRYA 177 L Q E A E + Q P + +Y ++ DLN A Y Sbjct: 8 LFAQAYKLHHEGHLPQAISIYEQILAQDPKHLNSLHFLGL--VYAQA---NDLNKAILYL 62 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 TKA +SP + + Y +++W +AI + ++ + L +L+N Sbjct: 63 TKAQTLSPTDATLLNNLANAYKKSQQWDKAIDGYLHAIQLRPDYAQAHNNLATVYALQN- 121 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + + H +++ + A+ L+ QN + A Sbjct: 122 ---NYPKALHHYTKAVHAEPDF-SAAHFNLGLLLLQNNQLDAAKT--------------- 162 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + +N E+ + + LE ++D+A ++ Sbjct: 163 ---------------QFNNVVALNPYHTEAYFYLGVLHLEGNALDEAEQAFQHVLEQD 205 >gi|47222947|emb|CAF99103.1| unnamed protein product [Tetraodon nigroviridis] Length = 1037 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 104/308 (33%), Gaps = 28/308 (9%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 85 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 142 Query: 123 YLLEVQIALAERQYNIAH--------EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 LL+ L E + A ++ A +L G++ A Sbjct: 143 NLLKALGRLEEAKPAAATSLTKSKNMACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAI 202 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + KA+ + P+ + A+ + RA+ + + N A++ + Sbjct: 203 HHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSP----NHAVVHGNLAC 258 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP 293 ++G + + +++L + A A +L + +AE ++ P H Sbjct: 259 VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHA 318 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAM 349 + N ++ E G ++ A++L E + ++ + + G + +A Sbjct: 319 DSLNNLANIKRE--QGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 376 Query: 350 LAMKIAPR 357 A++I+P Sbjct: 377 EAIRISPT 384 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P P + S A N + A L + Sbjct: 274 RRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPT----HADSLNNLANIKR 329 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G++ + ++L++ A A L Q K ++A + ++ +++P A+ Sbjct: 330 EQGNIEEAIQLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FAD 387 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 388 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 447 Query: 353 KIAPR 357 K+ P Sbjct: 448 KLKPD 452 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 44/331 (13%), Positives = 100/331 (30%), Gaps = 76/331 (22%) Query: 133 ERQYNIAHEKLEMM-LQIPA-TREFAVYS------------LYFES--------CRIGDL 170 + A + Q P T A L E+ G L Sbjct: 24 SGDFEAAERHCMQLWRQEPDNTAMLATRDDFFYTLAIKQNPLLAEAYSNLGNVYKERGQL 83 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILL 229 A + AL + PD + V A + A+ + + + + Sbjct: 84 QEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGN 143 Query: 230 IARSLENADKGDMIASYHD--------AIESLKLCDNSIMA------------------- 262 + ++L ++ A+ +++++ N +A Sbjct: 144 LLKALGRLEEAKPAAATSLTKSKNMACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIH 203 Query: 263 ----SICA----AKSLISQNKKRKAEVILEKIWK-------VNP-----HPEIANIYTH- 301 ++ + I+ K I ++ ++P H +A +Y Sbjct: 204 HFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHAVVHGNLACVYYEQ 263 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360 L + + +RA+ L ++ ++ E G++ +A A+++ P + Sbjct: 264 GLIDLAIDTYRRAIEL---QPHFPDAYCNLANALKEKGNVSEAEECYNTALRLCPTHADS 320 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LA I++ N ++ + + AL P+ Sbjct: 321 LNNLANIKR-EQGNIEEAIQLYRKALEVFPE 350 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A E L++ T ++ +L G++ A + KAL++ P+ Sbjct: 291 ANALKEKGNVSEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAIQLYRKALEVFPE 350 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 351 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 406 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 407 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 464 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 465 QIVCDWTDYDERMKKLVTIVADQLDKNRLPSVHPHH 500 >gi|283851848|ref|ZP_06369125.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] gi|283572764|gb|EFC20747.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] Length = 865 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 100/302 (33%), Gaps = 20/302 (6%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GYK L GLM + A+ + ++ E + Q +A +L Sbjct: 279 GYKLL--GLMDLTRG--TTAQAVTNFERALRLRP-ESETHFFLAQAYERNGNLELAISEL 333 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +L A L + ++ + A + L PD+ + Y+ K+ Sbjct: 334 RQVLDASPRHLKARQMLANMNLKMDRTDEAIDELQRVLTYHPDSYEDKLLLGDLYLSRKD 393 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 +++++ F + A + + L D G + + +++ + A Sbjct: 394 FAKSLAFYEA----IPDGVEQSATAHLKKGLIFGDTGKPEQAEAELRQTIGQSPEFLEAR 449 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRL 317 I Q + +A +LE P H A I+ ++ V L++A L Sbjct: 450 IALVALYKQQQRLDEAASVLEAPGLSQPDVAQAHTIRAAIFLQQGRTDEAVALLEKAKTL 509 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNT 375 N + ++K + ++A + + P+ L A +E + + Sbjct: 510 ---NPKLATPYYTLAKFYSQRMEPEKAMDQYRQLLIQQPQSPSAHTALAAALEARGNFDE 566 Query: 376 DK 377 + Sbjct: 567 AQ 568 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 70/231 (30%), Gaps = 35/231 (15%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G + A KA ++P + + Y E +A+ Q + Sbjct: 491 LQQGRTDEAVALLEKAKTLNPKLATPYYTLAKFYSQRMEPEKAMDQYRQLLIQQPQSPSA 550 Query: 225 RAILLIA-RSLENADKGD----MIASYHDAIESLKLC----------------------- 256 L A + N D+ A+ A L+L Sbjct: 551 HTALAAALEARGNFDEAQQHLEQAAASKQADAYLRLAGFLARRNKIDLAEQTLGQCLKEN 610 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL- 315 SI A + ++ ++ + K+ L + ++ IA L E + +A Sbjct: 611 SKSIPALVTLSRLQLAAGDETKSLATLRDVAAIDQKAAIAE---RLRRETAAKRWDQAEA 667 Query: 316 ---RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + E+ + + ++ + L+ + A A+++ P L Sbjct: 668 EATKFIELAPAAAGGYITLASVKLQREDVPGAERLLRQALEVEPASIGARL 718 >gi|15893707|ref|NP_347056.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|15023269|gb|AAK78396.1|AE007556_6 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|325507829|gb|ADZ19465.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018] Length = 376 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 86/268 (32%), Gaps = 48/268 (17%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 ++++A E + L+ + ++ + A Y ++L I+P+ + Sbjct: 21 LVDKHDLAIEYFKKSLEYKKDDFGVLINIAANYTVLKQYEKAIEYYERSLKIAPNDEFAM 80 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + L +++ A + KN K+ L + + G+ + + Sbjct: 81 SEIGNLLFLKEDFKGAAKQFDNIVKNNKDNK----TALYNKGISLERAGEYLEAIECYDL 136 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +KL + + A A+ K ++A Y + Sbjct: 137 LIKLDNKYMDAYYSKARVQEEIGKHKEAIS----------------TYIAI--------- 171 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI------FLLLA 365 + K+ E + +S I +G D+A +++ P + + L+L Sbjct: 172 ------ANLKKDDGEPYLRISSIYNRIGFYDKALIYIEKLLEVDP-ERVIGYVDKALILI 224 Query: 366 QIEQANSHNTDKILYWTQSALHAM-PDP 392 E+ + L W A+ DP Sbjct: 225 STER-----YNDALEWINRAIKMENRDP 247 >gi|223934537|ref|ZP_03626458.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223897000|gb|EEF63440.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 718 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 61/381 (16%), Positives = 121/381 (31%), Gaps = 59/381 (15%) Query: 8 FFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFA-------WILLFA 60 FV+ + + + + + W L P + L + A I LF Sbjct: 353 VFVLGMSAAAVVW-GRKQRYLFVGWFWFLGTMVPVIGLVQVGIQAMADRYSYIPHIGLFI 411 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAA-----------HNIPLARKMHSY 109 V P ML L T + IA + + Sbjct: 412 VLA--WGVPEMLASW----KQRMEVLVLTTTMALIACLALTLNQEKYWCDSVTLFTHATR 465 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---- 165 V++ + L + L+ Q + + A + ++I Y E+ Sbjct: 466 VTKNNYLAYNNLGHWLDNQ-----GKPDEALANYQKSIEINPN--------YDEAQNNIG 512 Query: 166 ----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G A Y +L ++P+ V + Y + AI K + Sbjct: 513 YVLAKKGKPEEAIPYYFSSLRLNPNRAEVHNNLGNAYADLGKLDEAIREYQAALKINTNY 572 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A + A KGD+ + ++++L ++ + Q K A + Sbjct: 573 ----AEAYNGIGISLAKKGDLAGATRWLSDAIRLNPKNVSSHSNLGNVYAMQGKFDLAAI 628 Query: 282 ILEKIWKVNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 + + K NP H +AN+ + + +G+ + AL+L+ ++ E+ + Sbjct: 629 EYKLVLKQNPDDALTHNNLANLLSEQGKLDEAIGEYRSALKLKA---DNPEANYNLGLAL 685 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 L D+A A+++ P Sbjct: 686 LRQNKRDEARQHFNEALRLRP 706 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 5/82 (6%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + L LL Q + + A + L++ A A Y+L R + Sbjct: 639 DDALTHNNLANLLSEQ-----GKLDEAIGEYRSALKLKADNPEANYNLGLALLRQNKRDE 693 Query: 173 AQRYATKALDISPDAPWVTEAV 194 A+++ +AL + P+ P + Sbjct: 694 ARQHFNEALRLRPNYPEAQRQL 715 >gi|78187472|ref|YP_375515.1| TPR repeat-containing protein [Chlorobium luteolum DSM 273] gi|78167374|gb|ABB24472.1| TPR repeat [Chlorobium luteolum DSM 273] Length = 586 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 102/370 (27%), Gaps = 57/370 (15%) Query: 69 PAMLFHMLHKRNYDKGYKAL--YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126 P + AL T ++ + AR + + L L Sbjct: 74 PGAIKGYHELLRRQPLNAALYFSTAKAFLSLGELDSARVYAERCAALSPSNRHALGLL-- 131 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++ A + A + + + + L E A + L + P Sbjct: 132 ADVSHAMGEPKRAVQLYGKLAHMDPGNTELLTWLAMEHLAAEQPAEALSVFQRVLSLDPG 191 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 V+ + + + AI L + K R R L GD + Sbjct: 192 NETARSHVLLLQIRMQRYPEAIASLREMTKGGNGDERLRLTL----GGLYLRTGDYADAA 247 Query: 247 HDAIESLKLCDNSIMASIC--------------AAKSLISQNKKRKA------------- 279 E++ I A + + L + R A Sbjct: 248 STFREAIDASPGFIPAWLALFEVSVRSKDMMSFRSDLLSFYDTLRPALPKKLELTRFYLS 307 Query: 280 EVILEKIWKV----------NPHPEIANI-----YTHLLSENTVGKLKRALR---LEEIN 321 E + + ++++ HPE A + + +++ G L+ L++ N Sbjct: 308 ESVSDSLYRIPSRIMLDETCRRHPESAEALMLRGWARMRADDLGGALRDFRAAVPLDQKN 367 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILY 380 + ES + L A + A + P + + F +L S + + Sbjct: 368 SDLRES---LVSALLVSRQFSAAQRVVLRARRDFPSERLRFQILEGYVLYESGKARQAVP 424 Query: 381 WTQSALHAMP 390 + AL + Sbjct: 425 LLEQALRSRR 434 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 46/162 (28%), Gaps = 8/162 (4%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + A S E L A + A + +L+ Sbjct: 38 SGPARKAEMAARSDSLDAVMERE----FLRASFLDARGDHPGAIKGYHELLRRQPLNAAL 93 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +S +G+L+SA+ YA + +SP + E RA+ L K Sbjct: 94 YFSTAKAFLSLGELDSARVYAERCAALSPSNRHALGLLADVSHAMGEPKRAVQ-LYGKLA 152 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + N LL ++E+ + L L Sbjct: 153 HMDPGNTE---LLTWLAMEHLAAEQPAEALSVFQRVLSLDPG 191 >gi|118477072|ref|YP_894223.1| TPR repeat-containing protein [Bacillus thuringiensis str. Al Hakam] gi|229183813|ref|ZP_04311030.1| hypothetical protein bcere0004_13810 [Bacillus cereus BGSC 6E1] gi|118416297|gb|ABK84716.1| TPR-repeat-containing protein [Bacillus thuringiensis str. Al Hakam] gi|228599662|gb|EEK57265.1| hypothetical protein bcere0004_13810 [Bacillus cereus BGSC 6E1] Length = 434 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKIDELSVPFYVELANIAAKL 298 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|228926649|ref|ZP_04089718.1| hypothetical protein bthur0010_13650 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228945218|ref|ZP_04107574.1| hypothetical protein bthur0007_13810 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229090580|ref|ZP_04221815.1| hypothetical protein bcere0021_14050 [Bacillus cereus Rock3-42] gi|229121161|ref|ZP_04250398.1| hypothetical protein bcere0016_14670 [Bacillus cereus 95/8201] gi|228662280|gb|EEL17883.1| hypothetical protein bcere0016_14670 [Bacillus cereus 95/8201] gi|228692783|gb|EEL46507.1| hypothetical protein bcere0021_14050 [Bacillus cereus Rock3-42] gi|228814453|gb|EEM60718.1| hypothetical protein bthur0007_13810 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228833025|gb|EEM78593.1| hypothetical protein bthur0010_13650 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 434 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|71898753|ref|ZP_00680922.1| heat shock protein [Xylella fastidiosa Ann-1] gi|71731518|gb|EAO33580.1| heat shock protein [Xylella fastidiosa Ann-1] Length = 392 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 50/389 (12%), Positives = 113/389 (29%), Gaps = 44/389 (11%) Query: 60 AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107 F A L + R G+ + GL + + A ++ Sbjct: 7 WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 66 Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163 + + ++ L +L + + + A + + + P + FA+ +L + Sbjct: 67 AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 121 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222 + G L+ A+ T+ I AP ++ Y ++W +AI + + + Sbjct: 122 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVVTGEPMG 181 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + A + + + + + S+ A I + A Sbjct: 182 KLIAQFECELADRSRASNQHDRALEAVSRAYQADATSVRAGIIEGRIEADLGHHEAAVRA 241 Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333 E+ + +P P + Y + + A E + + +++ Sbjct: 242 WERAARHDPEYLPEIIPSLLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 295 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391 + QA +K P L + A+ + LY + + + Sbjct: 296 LIESQEGPAQARVYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 355 Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417 P + G + W P K Sbjct: 356 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 382 >gi|168007614|ref|XP_001756503.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692542|gb|EDQ78899.1| predicted protein [Physcomitrella patens subsp. patens] Length = 809 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 20/223 (8%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAIL- 228 A A+ + P V + A T + + +E + IL Sbjct: 251 EQALISFQLAVQLKPQDVRAHFLVGNSLYSLGRYEEARTSYQKALEAGEENAQEWQGILP 310 Query: 229 --LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + +G ++ + E+ L A +L + R A+ LE+ Sbjct: 311 QVHVNLGIALEGEGMLMCACDHYREAAILNPRHYRALKLLGSALFGLGEYRAAQKCLEEA 370 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H ++ + H L ++ L+ + ++N V++L + + + G Sbjct: 371 LVLKPDYTDAHCDLGSA-LHALHDDEQAILE-FQKTIDLNPNHVDALYNLGGLLKDSGRY 428 Query: 342 DQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKI 378 ++A +++ PR LL ++ K Sbjct: 429 ERAAEMYAKVIQLRPRDWRAQLNRAVSLLGA---GEQEDSRKA 468 >gi|74316214|ref|YP_313954.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC 25259] gi|74055709|gb|AAZ96149.1| conserve hypothetical protein containing TPR repeat [Thiobacillus denitrificans ATCC 25259] Length = 927 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 81/260 (31%), Gaps = 7/260 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + S + + LV+ L ++ A E L++ A +L Sbjct: 454 AALASIAALEKKEGANPLVWNYRGAAYLGKQDKVRARASFEEALKLDRGFFPAAANLAQL 513 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + +A++ L P A+ + + + + +L + + Sbjct: 514 DLQEKRPAAARQRFESILAADPKHLGAMLALAELALRSGDEKTHTRWLEKAAAAHPQAQE 573 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 R +A KG A E++ L +S A + ++ A Sbjct: 574 PR----LALGSHLLRKGSAAQGLTVAREAVNLAPDSPAALELLGSAQLALGDSANALASY 629 Query: 284 EKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K+ + P P Y ++++ G + + + ++ +++ +I +E Sbjct: 630 RKLVERQPDQAAPLAKLAYAQWVAKDAAGARRSLQAALQREPDFRDAQLLLGRIEIEAER 689 Query: 341 IDQAHAKAMLAMKIAPRKEI 360 + A+ A P + Sbjct: 690 FEAAYRIARRMQAQKPEQAA 709 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 54/196 (27%), Gaps = 11/196 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G A L I+P P A+ + + A ++ + + Sbjct: 211 ASGKSAEATATYRDILRIAPRHPNARLALAGIALAENRLAEARKEVDGALA----FTPSS 266 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 R+L + +G + LK + A + + AE K Sbjct: 267 LQAHYLRALIDFKEGKTERARDGLAAVLKSAPEFLPALQLGGTVEYALGNLQTAEAHFNK 326 Query: 286 IWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + + PH +A + + + N + +L + +IAL Sbjct: 327 VVQAAPHDPYAVRLLAATQLRMGRFDDAART--IGVALRRNADDPAALTVAGEIALAKRD 384 Query: 341 IDQAHAKAMLAMKIAP 356 QA A P Sbjct: 385 FAQAARYFEDAASRDP 400 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 85/269 (31%), Gaps = 7/269 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A A +L+ L A + L DL +A++ +A + Sbjct: 35 QAKKMAAAGDDKSAIIQLKNALAADEDDAEARFELGKLYLARLDLAAAEKEFRRAREAGY 94 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 A + + + + + R + L + + L R+ G + Sbjct: 95 PAAAANVMIARALLGQRAFQRLLDELPAPSGKSDDA----LALHALRATAELGLGRKDDA 150 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL- 303 ++ + + A+ + K A +++ +++P H + + LL Sbjct: 151 RKTLAQAQADAPRNAEVQLALAQLAAADGKPADAMKAVDEALQIDPAHRDSLLLKGDLLY 210 Query: 304 -SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 S + + I + + ++ IAL + +A + A+ P Sbjct: 211 ASGKSAEATATYRDILRIAPRHPNARLALAGIALAENRLAEARKEVDGALAFTPSSLQAH 270 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPD 391 L + T++ + L + P+ Sbjct: 271 YLRALIDFKEGKTERARDGLAAVLKSAPE 299 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 90/303 (29%), Gaps = 18/303 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G + + AR + L Q+ L E++ A ++ E +L Sbjct: 476 RGAAYLGKQDKVRARASFEEALKLDRGFFPAAANL--AQLDLQEKRPAAARQRFESILAA 533 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A+ +L + R GD + R+ KA P A A+ + S A Sbjct: 534 DPKHLGAMLALAELALRSGDEKTHTRWLEKAAAAHPQAQEPRLALGSHLLRKG--SAAQG 591 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 ++ + A+ L+ + GD + + ++ + A + Sbjct: 592 LTVAREAVNLAPDSPAALELLGSA--QLALGDSANALASYRKLVERQPDQAAPLAKLAYA 649 Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 A L+ + P + I ++ R R++ E Sbjct: 650 QWVAKDAAGARRSLQAALQREPDFRDAQLLLGRIEIEAERFEAAYRIAR--RMQAQKPEQ 707 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380 V+ A A A A IAP +L+ +++A +IL Sbjct: 708 AAGFVLEGDTAFVQKDFPAALAAFEHAHAIAPSSATLARQHRVLSALQRAPEG-EKRILA 766 Query: 381 WTQ 383 W Sbjct: 767 WLS 769 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 88/285 (30%), Gaps = 8/285 (2%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 ++ + +IALA+R + A E L +GD Sbjct: 361 ALRRNADDPAALTVAGEIALAKRDFAQAARYFEDAASRDPGNAAIRTELGISRLGLGD-E 419 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A A + ++ + K++ A+ + +K ++ Sbjct: 420 RALADLRTAAGMEGAGSRAHTFLILDGLKRKQFDAALASIAALEKK----EGANPLVWNY 475 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 R K D + + E+LKL A+ A+ + + + A E I +P Sbjct: 476 RGAAYLGKQDKVRARASFEEALKLDRGFFPAAANLAQLDLQEKRPAAARQRFESILAADP 535 Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +A L S + + + + ++ E + + L GS Q A Sbjct: 536 KHLGAMLALAELALRSGDEKTHTRWLEKAAAAHPQAQEPRLALGSHLLRKGSAAQGLTVA 595 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 A+ +AP L L Q ++ L + + PD Sbjct: 596 REAVNLAPDSPAALELLGSAQLALGDSANALASYRKLVERQPDQA 640 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 79/266 (29%), Gaps = 42/266 (15%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G A +A++++PD+P E + + + + A+ + + + Sbjct: 583 LRKGSAAQGLTVAREAVNLAPDSPAALELLGSAQLALGDSANALASYRKLVERQPD---- 638 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A L + D + +L+ + A + + I + A I Sbjct: 639 QAAPLAKLAYAQWVAKDAAGARRSLQAALQREPDFRDAQLLLGRIEIEAERFEAAYRIAR 698 Query: 285 KIWKVNP--------------------------------HPEIANIYTHLLSENTVGKL- 311 ++ P P A + + + + Sbjct: 699 RMQAQKPEQAAGFVLEGDTAFVQKDFPAALAAFEHAHAIAPSSATLARQHRVLSALQRAP 758 Query: 312 ---KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 KR L + + + +++++ ++ A ++ K AP + L Sbjct: 759 EGEKRILAWLSTHADDAPARLLLAESLIKRHEYAAAARHYLVLHKKAPDDLVVLNNLAWA 818 Query: 369 QANSHNTDKILYWTQSALH-AMPDPL 393 S + + L + AL DP Sbjct: 819 LHQSKD-ARALGYATRALKLRPEDPA 843 >gi|223935536|ref|ZP_03627453.1| TPR repeat-containing protein [bacterium Ellin514] gi|223895946|gb|EEF62390.1| TPR repeat-containing protein [bacterium Ellin514] Length = 1072 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 91/292 (31%), Gaps = 21/292 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATR 153 A+ + + + + + A + L + P + Sbjct: 311 GKGDSAKALAEFEKTVRLYPQSPQAFYHLALAQMVANDSPKALGSLKQALALNRSYPEAQ 370 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + R GDLNSA T+ + P + + Y ++ A+ +Q Sbjct: 371 LLS----AEIYIRSGDLNSAVALLTQLVRQQPRLVQAQLLLAEAYRARGNYAEALGIYDQ 426 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 +++ + + A L + + L + +++ A I Sbjct: 427 LRQS---FPHEPQYVYKA-GLTFIQMNKKEEAQKAFEKVLVMSPDNLPALEQIVNLDIQA 482 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVES 327 KA +L+K PE+ + + ++ V LKRA+ L N + + Sbjct: 483 QDYSKALSLLDKEMANEKIVPELCVLQARIFESQKATQKAVAALKRAIEL---NPQMRIA 539 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 +++++ +E +QA M P+ L++ + N Sbjct: 540 YFLLARLYMESKQNEQAITNLQEVMVKNPKDTSALMMIGTIRDQEKNFAAAR 591 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 96/272 (35%), Gaps = 18/272 (6%) Query: 133 ERQYNIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATK-ALDISPDAP 188 + A E + L I A+ +L+ + + A + A A SP Sbjct: 176 QNNLKGAEEAINRALDIDKKFGPAYLALANLHLIKNEVKEAEQALKAAADNASAHSPRR- 234 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V A+ + E + L +K +A+ A S + D+ + Sbjct: 235 -VRYALFKIQ--HGEMEQGKVLLKAIVQKTPDNLPAWQALAETALSEKQFDE-----AMA 286 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLS 304 + L + ++ + + KA EK ++ P A +++ Sbjct: 287 IIDKVLIRDPENFDFLQLHGRTYLGKGDSAKALAEFEKTVRLYPQSPQAFYHLALAQMVA 346 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 ++ L + +N+ E+ ++ ++I + G ++ A A ++ PR + LL Sbjct: 347 NDSPKALGSLKQALALNRSYPEAQLLSAEIYIRSGDLNSAVALLTQLVRQQPRLVQAQLL 406 Query: 364 LAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395 LA+ +A + + + + Q +P ++ Sbjct: 407 LAEAYRARGNYAEALGIYDQLRQSFPHEPQYV 438 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 86/243 (35%), Gaps = 14/243 (5%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L YL ++ +A E+M+ P+T + + L+ ++ +A +A Sbjct: 611 LAYLYSEHFNQLDKALEMARRARELMVYDPSTADTLGWILFKKAQ----YAAALTLNREA 666 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENAD 238 D P P + V Y + + A +L + + ++ + ++ L +++ Sbjct: 667 ADKLPGEPEIQFHVGMGYYMLGKEESARLYLQRALQLKSDFFGHEEASLRLSILAIDPKS 726 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---- 294 GD + S + + +A A +KA +K K +P Sbjct: 727 GGDDVQSKLEKRIA--DQPEDEVALCRLAGIYERTGAFQKAADAYQKALKTSPDNAKVMA 784 Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A +Y+ L+ L+ A ++ E + + IA + + A + Sbjct: 785 SLALLYSDHLNNQQKA-LELAKNAHSLSPEDADISGALGHIAFLSRDYKWSLSLLQEADQ 843 Query: 354 IAP 356 +P Sbjct: 844 KSP 846 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 68/201 (33%), Gaps = 12/201 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 LYF + R+ + +Y L+ P + ++E + L + Sbjct: 104 LYFSAGRMKEAQEEVKYV---LEKRPQDQDAPMLLADLASTSQEVEQTRQALQKLLAAGG 160 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + +A S + ++ + +L + A + A + +N+ ++A Sbjct: 161 ----YKPACEVAISTLLIKQNNLKGAEEAINRALDIDKKFGPAYLALANLHLIKNEVKEA 216 Query: 280 EVILEKIW----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 E L+ +P ++ E GK+ + + +++ + +++ A Sbjct: 217 EQALKAAADNASAHSPRRVRYALFKIQHGEMEQGKV-LLKAIVQKTPDNLPAWQALAETA 275 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 L D+A A + P Sbjct: 276 LSEKQFDEAMAIIDKVLIRDP 296 >gi|209523075|ref|ZP_03271632.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209496662|gb|EDZ96960.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 672 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 85/274 (31%), Gaps = 24/274 (8%) Query: 136 YNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + + + P + +L G A Y +A+ PD+ Sbjct: 91 WQDAVQAYDVALRLNPD--LVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQPDSFKAYYL 148 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++WS A + E N + + A +G+ + ++ Sbjct: 149 LGNALSGLEKWSAA----ETAYQRGAELNPQCDRIHVDLGNMLAQQGNWQPAIAAYQTAI 204 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENT 307 K+ + +A S + KA + +K ++NP H + + + Sbjct: 205 KINPKNELAYHKLGNSWFRLQEPEKAISVYKKAMEINPLTPWSHLPLGRSLLEVGKVQEA 264 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA----HAKAMLAMKIAP--RKEIF 361 + RA E+N S + + QA + P K ++ Sbjct: 265 IAICFRA---VELNPNSYWAYENLGDALSRNRRFSQAIPIYLQALQKVPEDRPGVSKSLY 321 Query: 362 LLLA-QIEQANSHNTDKILYWTQSALHAMPDPLW 394 L I + + + DK W ++ PD W Sbjct: 322 RQLGYAIREQSQADVDKASQWLSEMINHPPDHNW 355 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 84/263 (31%), Gaps = 45/263 (17%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 E + A L+ +L + G+ A T AL+I PD V Sbjct: 20 EGKLEEAIACCNFALERQPYWPDGYKTLGLAYQKQGNFEQALIAYTNALEIKPDFAEVYG 79 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW------------------------------- 221 + Y K W A+ + + + Sbjct: 80 NLGSLYAEHKLWQDAVQAYDVALRLNPDLVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQ 139 Query: 222 -NRNRAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + +A L+ +L +K +Y E CD + L Q + A Sbjct: 140 PDSFKAYYLLGNALSGLEKWSAAETAYQRGAELNPQCDR---IHVDLGNMLAQQGNWQPA 196 Query: 280 EVILEKIWKVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 + K+NP E+A + + E + K+A+ EIN + S + + + Sbjct: 197 IAAYQTAIKINPKNELAYHKLGNSWFRLQEPEKAISVYKKAM---EINPLTPWSHLPLGR 253 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 LE+G + +A A A+++ P Sbjct: 254 SLLEVGKVQEAIAICFRAVELNP 276 >gi|153874560|ref|ZP_02002733.1| heat shock protein [Beggiatoa sp. PS] gi|152068976|gb|EDN67267.1| heat shock protein [Beggiatoa sp. PS] Length = 386 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 66/163 (40%), Gaps = 5/163 (3%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + N A + ++ P R A++ L + G L+ A+ + + + Sbjct: 81 GEVNRAIRIHQNLMARQSLEPQQRSLAMFELGEDYQSAGLLDRAESLFQELVTSNTHQVL 140 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +++ Y +W +AI + + + + A ++ + +G+ A+ Sbjct: 141 ALRQLLEIYQQEHDWEKAIRTAQKLHHASNEPLSPVIAQYYCEQAQDYIAQGNSHAAQQT 200 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++LK N + AS+ + + Q+ +KA + +++ + NP Sbjct: 201 IQQALKTDSNCVRASLLEGQLALEQDNPKKAIIAFKRVEEQNP 243 >gi|307719874|ref|YP_003875406.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306533599|gb|ADN03133.1| TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 839 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 7/179 (3%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G L G++++ A++ + + E L L I E + A E Sbjct: 46 GVHLLS-GMIALRQDRNEEAKEAFTKALELGGEEAEALNNL--GVIYRKEGDHRKAIEYF 102 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L R +Y+L G A+ KAL+ P + Y Sbjct: 103 RKALAADPDRPDILYNLANACKDAGLFEEAEAAYRKALEHDPHLVSAYNNLATLYQQRGA 162 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 +A+ L + + LL + +G + +L+ + A Sbjct: 163 IDKAVAVLEKGLTADPD----HPTLLYNLGVLYQREGRYEEARASFHRALQKRPGWVEA 217 >gi|311234841|gb|ADP87695.1| diguanylate cyclase [Desulfovibrio vulgaris RCH1] Length = 808 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 21/194 (10%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A E LQ A+Y+L +G+ A++ K L +P + Sbjct: 622 GRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVR 681 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Q K +++A + N+ + ++ + + +G + ++L Sbjct: 682 LGQLAEGEKRYAQARQYFNKAARAGDSG----GLVHRNLARLSMRQGRPDEAREHLHDAL 737 Query: 254 KLCDNSIMASICAAKSLISQNK--------KRKAEVI---LEKIWKVNPHPEIANIYTHL 302 +A A+ + + R++ + L++ W E+A Sbjct: 738 LRNPQDAVALQLMARLYLDGGEDPAMAEALSRQSVALRPDLKQGWL-----ELARA-LDA 791 Query: 303 LSENTVGKLKRALR 316 + R Sbjct: 792 RGHVAEAREARLRA 805 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 5/155 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ARK + + H LV L Q+A E++Y A + + + Sbjct: 656 GETAEARKQYRKCLKYAPGHVFALVRL--GQLAEGEKRYAQARQYFNKAARAGDSGGLVH 713 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L S R G + A+ + AL +P + + + Y+ E A+ ++ Sbjct: 714 RNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYLDGGE-DPAMAEALSRQSV 772 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A + + L +AR+L+ +G + + + + Sbjct: 773 ALRPDLKQGWLELARALD--ARGHVAEAREARLRA 805 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 41/226 (18%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A AL ++ A + Q + + Sbjct: 588 GDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKP----GDPM 643 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L G+ + + LK + A + + ++ +KR A+ Sbjct: 644 ALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQL--AEGEKRYAQ------- 694 Query: 288 KVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 A Y + + ++ G + R ++++++ G D+A Sbjct: 695 --------ARQYFNKAARAGDSGGLVHR----------------NLARLSMRQGRPDEAR 730 Query: 346 AKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMP 390 A+ P+ + L L+A++ + + A+ Sbjct: 731 EHLHDALLRNPQDAVALQLMARL-YLDGGEDPAMAEALSRQSVALR 775 >gi|315185862|gb|EFU19627.1| restriction endonuclease [Spirochaeta thermophila DSM 6578] Length = 456 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 42/337 (12%), Positives = 98/337 (29%), Gaps = 53/337 (15%) Query: 40 SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99 + ++L + IL + + LS P +R + +A+ Sbjct: 3 ALPLLLPAAIVLIGLVILAVYFNLYVLSDPEK----KAERKKRRDRQAI----------- 47 Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATR---- 153 + + + ++ + ++++ A + +++ + T+ Sbjct: 48 ------LKKAQRRLAQNPRDPEALVVLAEAYFEDQEWEKALKLYQVLAEGVTDRTKVDEY 101 Query: 154 -EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + R+G A + A + P+A V + L + A+ L+ Sbjct: 102 EVQVRRGVC--AFRLGRHEEAYQAFAVAYSLKPEAFEVRFHMGALEYLRGAYEHAVKLLS 159 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 E R L SL G + L + A L + Sbjct: 160 AAAAQQPEHPETRRYL----SLALHRSGKYKEALPSIRAILNEMPDDKELLFAYADCLAN 215 Query: 273 QNKKRKAEVI-----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-- 325 +K +A I +++ W + L + + +RA++ EI Sbjct: 216 LGQKEQALSIFTHLRVDEQWGPQ------ACFRAGLINLGLHRYERAIKDLEIGVRHRGM 269 Query: 326 ------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E +++ + I +A + P Sbjct: 270 DNQLRLEMEYRLAQAYIHQKEIRKAVEHLRAVQRTNP 306 >gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE] gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 348 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 17/265 (6%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPATREF-A 156 ++ A K ++ + H + ++ L LA + A + M + P + E A Sbjct: 74 DLDNAVKEYNETLRLKPDHLDAMLNL--ANAYLAMGNADDALGLFKDMIAKNPESAEVFA 131 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + G L+ A+ KA+ P + + Y+ E AI ++ + Sbjct: 132 SFGVALA--SAGYLDDAEEMLKKAIAKDPRSFDGHLFLAGVYMDKGEVDDAI----KEYR 185 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A + + ++KG + + ++ L + A A L QN+ Sbjct: 186 IAATISPEEPSVFYNWGFALSEKGLTMDAIEKYQIAVHLDPGFVEARYNLASMLAKQNRL 245 Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A L++ K +P H + IYT E T + +++ + + + Sbjct: 246 DEAITELKETIKADPSFADAHNMLGVIYTA--KEFTRAAINELEEAVKLDPDFAVAYNNL 303 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356 + D+A A+KI P Sbjct: 304 GMVYYGQEQYDEAIKVFEQALKIDP 328 >gi|218780050|ref|YP_002431368.1| hypothetical protein Dalk_2207 [Desulfatibacillum alkenivorans AK-01] gi|218761434|gb|ACL03900.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 661 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 105/341 (30%), Gaps = 43/341 (12%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL+ + A + ++ N+ L A +Y+ A + ++ Sbjct: 221 LTMGLIYSKEGDHYAAVEQYTKAMVLDPGSNQALGR--RALAYAAAGEYDKALADAQKVV 278 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + Y L + + A TKAL+I+P+ P + L ++ A Sbjct: 279 ADDPDKALGYYYLGSIYTQRNEPEKAYESYTKALEITPNEPALYLGQAHAARLKGDYDLA 338 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----S 263 + ++ + L R G + D +++++L S+ Sbjct: 339 LKNADEAIALFPGKDS----LYFERGNIYEIMGQKPKALEDYLKAVELNPQSVQGHFRLG 394 Query: 264 ICAAKSLISQNKKRKAEVILE--------KIWKVNPHPEIA---------NIYTHLLSEN 306 + A+SL +Q ++E W+ + + L S++ Sbjct: 395 VNYAQSLANQKAYEHFSKVIEVNENHVMAYAWRAVINARLGKKAEGVSDSEKAVALKSDS 454 Query: 307 TV----------------GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + +++ + ++N E + + K +++ A Sbjct: 455 PLVLYFTGTAYGLLKMPEAAIRQLDKAVQLNPEYALAYMERGKAHMQLRQYRAAVRDLEK 514 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A++ P L A + K + W L PD Sbjct: 515 AVQYNPDLCGAYLQAAYAARYMGDDLKTVDWLSQYLDCKPD 555 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 71/260 (27%), Gaps = 13/260 (5%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---R 166 + + ++ + A + R A Y + Sbjct: 71 SAAAKLSPDNAVLLFQRGGAYARTGDHEQAVQDFTQ-AINMIARFPAAY--VQRAKSYAA 127 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 +GD A+ A+ + PD W + + +A+ + + + + A Sbjct: 128 LGDYEKARADFDAAIALLPDQAWPYREIAGFCSQQGNYGQALVYYLKALEIEPD----NA 183 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L+ AD G + + K S + + A K Sbjct: 184 ALMCLMGKAQADAGYPEKGIQTCLNAAKSDPQSAEPYLTMGLIYSKEGDHYAAVEQYTKA 243 Query: 287 WKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++P A + + L A ++ + + + I + ++ Sbjct: 244 MVLDPGSNQALGRRALAYAAAGEYDKALADAQKVVADDPDKALGYYYLGSIYTQRNEPEK 303 Query: 344 AHAKAMLAMKIAPRKEIFLL 363 A+ A++I P + L Sbjct: 304 AYESYTKALEITPNEPALYL 323 >gi|188501624|gb|ACD54747.1| tetratricopeptide 2-like protein [Adineta vaga] Length = 855 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 99/308 (32%), Gaps = 51/308 (16%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQI 149 +S+ + + P R++ + ++ + L LL Q++ A E +L Sbjct: 401 LSLTSDDDPRLRQLTDCIREEIFPKKDPWYQLGELLIKM-----GQFDEAQHVYESLLST 455 Query: 150 PATR--EFA--VYSLYFESCRIGDLNSAQRYATKALDI-----SPDAPWVTEAVVQQYVL 200 R E L + GD SA ++ K L+I S ++P T + L Sbjct: 456 KEVRQRELGDIYRQLSRVKEQQGDYESAVAFSEKGLEIVKKSFSSNSPEQTTFYIDLGSL 515 Query: 201 A---KEWSRAI----TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAI 250 +S+A+ L +++ + + I G + A Sbjct: 516 NKKMGVYSKALTYYEKALEIQQQTLPPDHSDLPITYNYIGSIYEKMGQYSKALSFHEKAY 575 Query: 251 ESLKLC-----DNSIMASICAAKSLISQNKKRKAEVILEKIWKVN----P--HPEIANIY 299 E K+ N + + KA E+ +++ P HP +A Y Sbjct: 576 EIQKISRSTNSSNFATTNSYIGFVYEKMGEYSKALSSHERAYEIQKVNVPSNHPSLATAY 635 Query: 300 THLLS-----ENTVGKLKRALR--------LEEINKESVESLVIVSKIALEMGSIDQAHA 346 ++L S + L + L + + S + + M +A + Sbjct: 636 SNLGSVYEKMGDYPKALSYYEKALSIQQKSLLSNHPDLAASYNNIGSVYENMNEYSKALS 695 Query: 347 KAMLAMKI 354 A++I Sbjct: 696 YEEKALQI 703 >gi|300864445|ref|ZP_07109316.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506] gi|300337589|emb|CBN54464.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506] Length = 1129 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 65/229 (28%), Gaps = 18/229 (7%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFA---VYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + + A + ++L G + A + +A+ + PD Sbjct: 430 QKQGKSAEAIAYFQK-TSDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQRAIAVKPDW 488 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + AI + + + L + +G + Sbjct: 489 AEAYANIGSARMQQGNLEEAIQYYRKAIAIKPQLE----ALHFNIANALLHQGKYEEAIS 544 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI--WKVNPHPEIANIYTHL--- 302 + E++K + A + Q K +A ++ +K P+ A +Y + Sbjct: 545 NYQEAIKHKPDWPDAIANMGNAFSMQGKLEEAIATYQQALVYK----PDWAEVYCRMGHI 600 Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + + + E+N E+ + + ++ A A Sbjct: 601 QKQDRPGESIGYFEKAIELNPYFSEAHQQLCDLLSHSSNLAGARKVADK 649 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 60/165 (36%), Gaps = 5/165 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 L E + + A + + + + A ++ + G+L A +Y KA+ I P Sbjct: 462 ANTLLTEGKRDEAIQSYQRAIAVKPDWAEAYANIGSARMQQGNLEEAIQYYRKAIAIKPQ 521 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + ++ AI+ + K+ +W AI + + +G + + Sbjct: 522 LEALHFNIANALLHQGKYEEAISNYQEAIKHKPDWP--DAIANMGNAFSM--QGKLEEAI 577 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++L + Q++ ++ EK ++NP Sbjct: 578 ATYQQALVYKPDWAEVYCRMGHIQ-KQDRPGESIGYFEKAIELNP 621 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 15/198 (7%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G+ A AL I PD + + AI Q + + RA Sbjct: 330 QGNFREAIASCQLALKIRPDFIQAYVTLGNALQGQGKMDAAIRAYEQALEFEPNYAEVRA 389 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + G + + +++ L + K Q K +A +K Sbjct: 390 NIGSMY----FKMGHLEKAIVYYQQAIALKPDLAGVYWNLGKVFQKQGKSAEAIAYFQKT 445 Query: 287 WKVNPHP-------EIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 +NPH +AN + + +RA + + E+ + ++ Sbjct: 446 SDINPHVVGADFHFNLANTLLTEGKRDEAIQSYQRA---IAVKPDWAEAYANIGSARMQQ 502 Query: 339 GSIDQAHAKAMLAMKIAP 356 G++++A A+ I P Sbjct: 503 GNLEEAIQYYRKAIAIKP 520 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 35/129 (27%), Gaps = 5/129 (3%) Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + + A + ++ P E + + Y KA++++P Sbjct: 566 AFSMQGKLEEAIATYQQALVYKPDWAEVYCR--MGHIQKQDRPGESIGYFEKAIELNPYF 623 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + + + A ++ + E + A G + Sbjct: 624 SEAHQQLCDLLSHSSNLAGARKVADKYCEYCGE--SVPVMSATAYVFSYLQSGVSELALQ 681 Query: 248 DAIESLKLC 256 IE KL Sbjct: 682 KLIEIEKLS 690 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 72/197 (36%), Gaps = 11/197 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G L++A KA+ + + + + + Y+L + AI K ++ Sbjct: 23 KEAGKLDAAADNYQKAISFNVEDAEIHRKLAEVYILKGQLDSAIASCKFALKVKPDF--A 80 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + + + ++ +M + H ++L++ N A + +A + Sbjct: 81 PAYLTMGNAFHSQEQLEM--AIHAYSQALEIDPNFAEAHANLGSMYYKLGRLDEAANSYQ 138 Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K N P +A++ L E+ + + + + + +++ + Sbjct: 139 KALANN--PNLASVLLMLGNILQQQEDLGAAIACYQKSLVLQPGLLRNYYKLAEALTKSN 196 Query: 340 SIDQAHAKAMLAMKIAP 356 ++D A + +++ P Sbjct: 197 NVDAAISCYQKVLQLQP 213 >gi|56750548|ref|YP_171249.1| hypothetical protein syc0539_c [Synechococcus elongatus PCC 6301] gi|81299815|ref|YP_400023.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942] gi|56685507|dbj|BAD78729.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168696|gb|ABB57036.1| TPR repeat [Synechococcus elongatus PCC 7942] Length = 359 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 13/225 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y A E L++ R A L R G+L A + + P+ Sbjct: 120 GEYAAAERYYEQSLRLDNKRAEAYRGLATVQQRRGNLVGAINTYQRWQQLEPNNWQPRNE 179 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + Y+ ++++ A+ L + A A + ++ + A+ S+ Sbjct: 180 MGKIYLQQRQFTNALQVLQAATRLAP----READIYSNLAIAQLGLNNPRAALTSLQSSI 235 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHL---LSENT 307 L + + A + + A + +++N A YT + + T Sbjct: 236 SLDPRNPRTLLKAGDIYLVLGDREAANRNYRRAFELN--RNSAKTLDRYTQILLDQGDAT 293 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + L + + + + + L G +A + A Sbjct: 294 LATVYLRDAL-RLEPRNPDFHLRLGLAYLARGLKPEARSSLNQAA 337 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 94/277 (33%), Gaps = 22/277 (7%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI-ALAERQYNIAHEKLE-- 144 L G+M + + A S Q N L LL+ A+ +R++ A + Sbjct: 9 LAIGVMVLGS----PAIVSVSAQPAQAAVPNPELSRLLDAGSEAVKQRRWAEALGLYQQA 64 Query: 145 MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 ++ R + LY E +GD A +A+ + Y E Sbjct: 65 QLIDGQDARIASAIGYLYTE---LGDFRQAALSFERAIAMDSQTAAFAFGAATAYANLGE 121 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 ++ A + Q + + RA + +G+++ + + +L N+ Sbjct: 122 YAAAERYYEQSLR----LDNKRAEAYRGLATVQQRRGNLVGAINTYQRWQQLEPNNWQPR 177 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLE 318 K + Q + A +L+ ++ P A+IY L N L Sbjct: 178 NEMGKIYLQQRQFTNALQVLQAATRLAPRE--ADIYSNLAIAQLGLNNPRAALTSLQSSI 235 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ + +L+ I L +G + A+ A ++ Sbjct: 236 SLDPRNPRTLLKAGDIYLVLGDREAANRNYRRAFELN 272 >gi|83816032|ref|YP_445721.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83757426|gb|ABC45539.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855] Length = 665 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 88/320 (27%), Gaps = 45/320 (14%) Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQ 135 R Y A + A+ A+ + + H L+ ++ A + Sbjct: 370 RRARSMYDA------ATASSPPDTAQLRAAAGVLRDVLHQSPDTEAALSLQAELYQAWGR 423 Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A +E +L P V R A A + + P + Sbjct: 424 PEEAGRAMERLLDLTPRAPGRWVR-TAQTYQRAHLYARAAGVAEEGFLLFPGHMPLARTA 482 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIES 252 + + ++A + A+L L + G + + Sbjct: 483 AFARLRTGDPAKARRHFQDALSLLGDSTGAAAEAVLHAGLGLAKSRLGRPREADDALKNA 542 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L A+SL Q+ + L++ L Sbjct: 543 RALAPQHPQVVRLYARSLARQDDR------LDQA------------------------LD 572 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQAN 371 A + E +S + + ++ ++ A +A+ P + L +E A Sbjct: 573 LAEQAVENAPDSPSAHRALGQVQFRRDELEAARRHLRIALDAGGPSATLLERLGDVEAAL 632 Query: 372 SHNTDKILYWTQSALHAMPD 391 ++T YW Q AL PD Sbjct: 633 GNDTAAQTYW-QRALDRNPD 651 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 30/100 (30%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A E L+ + +L G L++A YA +A P Sbjct: 138 GDYEEAISHFEAALEQVPEAPVLLLALADAHEAQGALSTALFYARRAQTQGSPRPSPYRR 197 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + + A + + A+ Q + N ++ Sbjct: 198 LAEMQRAAGDPAAALRTYQQLLDHVPNANDAHRARAAIQA 237 >gi|251792149|ref|YP_003006869.1| hypothetical protein NT05HA_0353 [Aggregatibacter aphrophilus NJ8700] gi|247533536|gb|ACS96782.1| tetratricopeptide domain protein [Aggregatibacter aphrophilus NJ8700] Length = 396 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 36/189 (19%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + +A ++ A +M+ P Sbjct: 91 GEVDRALRIHQALDNSPNYTFEQKLLAKQQLARDFMAVGFFDRAEHLYILMVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL AV+ Q W +AI + Sbjct: 147 --------------------FAEGALQ--------QLAVIYQKTKE--WKKAINAAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + NR ++N +++LK+ N + AS+ A I Q + Sbjct: 177 KISPNSNRIELAHYYCEYVQNLPDESKEEPKQILLQALKVSPNCVRASMMLADLYIKQKE 236 Query: 276 KRKAEVILE 284 + A ILE Sbjct: 237 YKSAVDILE 245 >gi|89899516|ref|YP_521987.1| hypothetical protein Rfer_0705 [Rhodoferax ferrireducens T118] gi|89344253|gb|ABD68456.1| Tetratricopeptide TPR_2 [Rhodoferax ferrireducens T118] Length = 924 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 10/253 (3%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + ++ L + LA+ + A + E L I AV SL + Sbjct: 464 EKKQPDKPFAAQLRARTLLAKNDVSGARKSFERALVIDPHYFPAVVSLAAIDLADKKPEA 523 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A++ LD P A+ + A + L A + +LLI Sbjct: 524 AKKRFEAVLDKDPKNGQAWLALAELASRAGASKDEVAKLIGSAVAANPTDVKSRLLLIDF 583 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-- 290 L D +++ D + ++ + A ++ + + +A K+ + Sbjct: 584 DLRQRDFKAAVSAAQDGVATVPDSPELLDA---LGRTQQAAGEPNQAIASYTKLAALQPL 640 Query: 291 ---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 PH +A + HL +NT L R EI + +E+ + +AL+ + A Sbjct: 641 SVLPHMRLAEV--HLAGKNTEAALASLRRALEIKPDLLEAQRALIALALDSKKPEDALTM 698 Query: 348 AMLAMKIAPRKEI 360 A + P + Sbjct: 699 ARSVQQQRPEEAA 711 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 70/194 (36%), Gaps = 9/194 (4%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GDL A+ Y KA SP ++ +++ A L + Sbjct: 384 GDLKKAEDYFAKAAQQSPQDGRKRTSLALTRLVSGATDGAFDELQT-IAASDTGTSADLA 442 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ + + + + K + A+ A++L+++N A E+ Sbjct: 443 LIS----VHLKRQEFDQALKAIDGLEKKQPDKPFAAQLRARTLLAKNDVSGARKSFERAL 498 Query: 288 KVNPH--PEIAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS-IDQ 343 ++PH P + + L + KR + + + ++ ++ + ++++A G+ D+ Sbjct: 499 VIDPHYFPAVVSLAAIDLADKKPEAAKKRFEAVLDKDPKNGQAWLALAELASRAGASKDE 558 Query: 344 AHAKAMLAMKIAPR 357 A+ P Sbjct: 559 VAKLIGSAVAANPT 572 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 100/320 (31%), Gaps = 46/320 (14%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESC-RIGDLNSAQ 174 +++ L + +A+ A +++ + P E L + GD A+ Sbjct: 25 NDKPEAMLSSAKDYMAKNDNKAAVIQIKNALQSNPDLPEA--RYLLGSALLDTGDPAGAE 82 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KALD+ V + + + +A + K +A L I+ + Sbjct: 83 LELRKALDLKHPQDAVVPQLAKALLAQG---KARKVTEEFAKTELGAASAKASLQISLTS 139 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--- 291 A +G+ + +L A + A+ Q + +A + E++ +P Sbjct: 140 AYAMQGEREQAQASLQAALLADPGFAPALLVQARQKAGQREFDQALALTEEVLAKSPRST 199 Query: 292 ---------------HPEIANIY----THLLSENTVGKL----------------KRALR 316 P+ A + + ++ ++ Sbjct: 200 EAWVFKGDLLLHVKNQPDEALAAYRKALEIKPDFMPAQVSVITLLLQQGKLVETQQQIEH 259 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 L++ ++ + ++ A + A +++ P+ L LA + + + Sbjct: 260 LKKTAARHPQTQFLEAQWAYQKKDFKLARQLLQQVLQLVPKSAQGLQLAGLVELQLNALP 319 Query: 377 KILYWTQSALHAMPDPLWIS 396 + A+ P+ W++ Sbjct: 320 AAQDYLSRAVQGAPE-SWLA 338 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 27/272 (9%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------IPATR 153 A+ +++ + H + + + ++ L A + Q T Sbjct: 350 GQAAQALNALLPGLSQEHVDPNLLSVAGEVYLLNGDLKKAEDYFAKAAQQSPQDGRKRTS 409 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--- 210 G + Q A S A++ ++ +E+ +A+ Sbjct: 410 LALTR--LVSGATDGAFDELQTIAASDTGTS-----ADLALISVHLKRQEFDQALKAIDG 462 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L +K+ + + RA L+A K D+ + +L + + A + A Sbjct: 463 LEKKQPDKPFAAQLRARTLLA-------KNDVSGARKSFERALVIDPHYFPAVVSLAAID 515 Query: 271 ISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKL-KRALRLEEINKESVE 326 ++ K A+ E + +P +A + + ++ K N V+ Sbjct: 516 LADKKPEAAKKRFEAVLDKDPKNGQAWLALAELASRAGASKDEVAKLIGSAVAANPTDVK 575 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 S +++ L A + A + P Sbjct: 576 SRLLLIDFDLRQRDFKAAVSAAQDGVATVPDS 607 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 59/154 (38%), Gaps = 7/154 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +AA A K S ++ +L++L ALA + Y A + ++++ Sbjct: 754 VAAGQGAEADKFSSSWQKEQPKDGAFLLHL--GDAALARKDYASAEKNYAAVVKLQPNSA 811 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A +L + S ++ A +A KA ++P+ P + + E+++A+ N+ Sbjct: 812 LAYNNLAWVSGKLN-KEGAVGFAEKANALAPNQPAFMDTLAVLLSDKGEYAKAVALQNKA 870 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A+ + + + G + + Sbjct: 871 LALQP----QNALFKLNLAKIHIKGGKKDLARKE 900 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 89/295 (30%), Gaps = 35/295 (11%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LE Q A ++ + +A + L+ +LQ+ + ++ L +AQ Y ++ Sbjct: 268 PQTQFLEAQWAYQKKDFKLARQLLQQVLQLVPKSAQGLQLAGLVELQLNALPAAQDYLSR 327 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ +P++ A+V Y+ A + ++A+ LL Sbjct: 328 AVQGAPESWLARRALVISYMRAGQAAQAL----NALLPGLSQEHVDPNLLSVAGEVYLLN 383 Query: 240 GDMIASYHDAIESLKLCDN---------SIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 GD+ + ++ + A + + A Sbjct: 384 GDLKKAEDYFAKAAQQSPQDGRKRTSLALTRLVSGATDGAFDELQTIAASDTGTSA---- 439 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++A I HL + LK LE+ + + + ++ L + A Sbjct: 440 ---DLALISVHLKRQEFDQALKAIDGLEKKQPDKPFAAQLRARTLLAKNDVSGARKSFER 496 Query: 351 AMKIAP-RKEIFLLLAQI--------------EQANSHNTDKILYWTQSALHAMP 390 A+ I P + LA I E + W A A Sbjct: 497 ALVIDPHYFPAVVSLAAIDLADKKPEAAKKRFEAVLDKDPKNGQAWLALAELASR 551 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 91/309 (29%), Gaps = 55/309 (17%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 A + + L+ L + A + N A + + L Sbjct: 591 KAAVSAAQDGVATVPDSPELLDAL-GRTQQAAGEPNQAIASYTKLAALQPLSVLPHMRLA 649 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-------------------------- 195 + +A +AL+I PD A++ Sbjct: 650 EVHLAGKNTEAALASLRRALEIKPDLLEAQRALIALALDSKKPEDALTMARSVQQQRPEE 709 Query: 196 --------QQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLIARSLENADKGDMIA 244 + K W RAIT K+ K + A L+ A ADK Sbjct: 710 AAGYALEGDIHASQKSWDRAITVYRGGLKHVKAPELAIKLHAALVAAGQGAEADKFSSSW 769 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IY 299 + L + + +++ AE + K+ P+ +A + Sbjct: 770 QKEQPKDGAFL--------LHLGDAALARKDYASAEKNYAAVVKLQPNSALAYNNLAWVS 821 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L E VG ++A L + ++ + + G +A A A+ + P+ Sbjct: 822 GKLNKEGAVGFAEKANALA---PNQPAFMDTLAVLLSDKGEYAKAVALQNKALALQPQNA 878 Query: 360 IFLL-LAQI 367 +F L LA+I Sbjct: 879 LFKLNLAKI 887 >gi|291565616|dbj|BAI87888.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 2281 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 86/255 (33%), Gaps = 42/255 (16%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR--------------- 206 + + G + A + ++++PD W + + ++W Sbjct: 14 NQLLQQGKIQEAVAEYRRGIELTPDLSWHHYYLGEALTQLEDWEGAVQAYRQAISLGSNY 73 Query: 207 ------------------AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 AI LNQ + ++ + L + ++L + G+ A+ Sbjct: 74 LCYYRLGVALVKLELWDEAIATLNQGLELKPDYYKF--YLPLGQALVHQQHGE--AAIEA 129 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSE 305 +++ L ++ L Q + +A L++ P ++ + + Sbjct: 130 YGKAVALKPGVAEFNLQLGHLLRRQGRFTEAVGYLQQAADFQGDDPQLQLGLGVALVEAG 189 Query: 306 NTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL- 363 + + R E+ + E+ + K+ G D+A A + +I P+ + L Sbjct: 190 TDLQRAEASLRRSLELQPDQGEAYFYLGKLEGLRGRWDEALAMYRRSWEINPQVGEWGLA 249 Query: 364 LAQIEQANSHNTDKI 378 LA+ + ++ + Sbjct: 250 LAEALEKLGRWSEAV 264 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 46/283 (16%), Positives = 93/283 (32%), Gaps = 26/283 (9%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKL 143 Y L L+ + + + N L +LL Q ++ A L Sbjct: 110 YLPLGQALVHQQHGEAAIEAYGKAVALKPGVAEFNLQLGHLLRRQ-----GRFTEAVGYL 164 Query: 144 EMMLQ----IPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + P + L G DL A+ ++L++ PD + + Sbjct: 165 QQAADFQGDDPQLQL----GLGVALVEAGTDLQRAEASLRRSLELQPDQGEAYFYLGKLE 220 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 L W A+ + + + L +A +LE G + + + Sbjct: 221 GLRGRWDEALAMYRRSWEINPQVGEWG--LALAEALEKL--GRWSEAVDQYRQVVLELGE 276 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKV---NP--HPEIANIYTHLLSENTVGKLKR 313 S AS+ ++L+ + +A V L + K+ P H A + L +++ Sbjct: 277 SGEASLGLGRALVQLERPVEAVVELRRAVKLGVDRPEVHRLWAGVLVEL--GRWPDVVEQ 334 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L E + + ++ + +G +A A+ ++AP Sbjct: 335 WQWLLERYPGAADMRRRLALALMGLGRWPEAAAQWGEYWRVAP 377 >gi|183222246|ref|YP_001840242.1| TPR repeat-containing signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912298|ref|YP_001963853.1| TPR repeat-containing lipoprotein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776974|gb|ABZ95275.1| TPR-repeat-containing lipoprotein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780668|gb|ABZ98966.1| TPR-repeat-containing protein; putative signal peptide [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 1197 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 100/308 (32%), Gaps = 57/308 (18%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 N A S+ + +L Q L + + E + + + T A Sbjct: 243 NYTEATAEFKKASELQPQNGSVWSFLGNAQ--LLNGKLKESEESFKKSISLSDTNANAYV 300 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW--------------VTEAVVQQY------ 198 L + + + + + +AL P V +A + Sbjct: 301 GLCNVLIQTHNYSDCLKTSKQALQKIPKNAEIRNKQGICEWKWGEVKKATLSFQDSSSWD 360 Query: 199 --------------VLAKEWSRAITFLNQKK---KNAKEWNRNRAILL-----IARSLEN 236 + + + A+ L + + K KE R IL IA Sbjct: 361 PNFMEPKMNLAYVLIDSGRYDEALDVLKKAETHPKAKKEDIRKAKILAESQKFIASGDSF 420 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKV-NPHPE 294 +G ++ + +++ + A A ++ + ++ +KAE + +++ N +P Sbjct: 421 LRQGKRKQAFDEYGKAMGVNPE-NPAVQNAYGRAYFAFSEYKKAEGSYLEAYRLDNTNPG 479 Query: 295 ----IANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +A +Y E+ K +K+ L + S + + +IA + D+A + Sbjct: 480 ALQGLARVYAK-TGESKKEKEFIKKLETLSATDP---FSAITLGRIAEDASKWDEAESIY 535 Query: 349 MLAMKIAP 356 M K P Sbjct: 536 MGLKKKFP 543 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 8/172 (4%) Query: 95 IAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 IA+ + L + V + A +Y A ++ Sbjct: 414 IASGDSFLRQGKRKQAFDEYGKAMGVNPENPAVQNAYGRAYFAFSEYKKAEGSYLEAYRL 473 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T A+ L + G+ + + K +S P+ + + A +W A + Sbjct: 474 DNTNPGALQGLARVYAKTGESKKEKEFIKKLETLSATDPFSAITLGRIAEDASKWDEAES 533 Query: 210 F---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 L +K N + + L R++E K + + +S K + Sbjct: 534 IYMGLKKKFPNNEAVDYRLGSLYYKRAVEENSKENYTKANEFIQKSKKYTKD 585 >gi|328865344|gb|EGG13730.1| DNAJ heat shock N-terminal domain-containing protein [Dictyostelium fasciculatum] Length = 539 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 87/264 (32%), Gaps = 30/264 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATK 179 +L+ ++ + + Y A + +LQ V L ++ SA ++ Sbjct: 160 SNILKGKLLIENKHYGKAQNLMSQLLQDDQMNPELLYVRGLAL--YYSNNMASAAQHFKN 217 Query: 180 ALDISPDAPWVTEAV-----VQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAI 227 +L PD A+ ++ A ++ +A ++ + +++ A Sbjct: 218 SLVYDPDFSDSRVALKKLNNLEAKKKAGNEAFVAKDYEKAYELFSEALEIDPKFDTLNAQ 277 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + R+ + D ++L+L N + A A+ + Q A LEK Sbjct: 278 IYNNRAATAVQLNKTREAIDDCTKALELDPNYVKAMTRRAQLYMKQEMYEDAVRDLEKA- 336 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 L E+ + + K + + + +A + +D A Sbjct: 337 -------------KGLDESDDIRRNLKEAKIALKKAARKDYYKILGVAKDCNEVDIKKAY 383 Query: 348 AMLAMKIAPRKEIFLLLAQIEQAN 371 LA++ P K + A+ A Sbjct: 384 RKLALQYHPDKNSTIPEAEKAHAE 407 >gi|317492357|ref|ZP_07950786.1| TPR repeat-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919696|gb|EFV41026.1| TPR repeat-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 389 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 89/287 (31%), Gaps = 51/287 (17%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S TF L + +A Y+ A E ++ + Sbjct: 83 GEVDRAIRIHQALMESASLTFDQRLLAVQQLGRDYMAAGLYDRAEEMFNQLVDEQDFKVS 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ L Y +W +AI + Sbjct: 143 ALQQLLI----------------------------------IYQATSDWQKAIDVAEKLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K K+ R A SL+ D+ ++ N S+ + I+++ Sbjct: 169 KQGKDQQRIEIAHFYCELSLQAMGSDDLERGMALLKKAASADKNCARVSVMLGRIYIAKD 228 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSE------NTVGKLKRALRLEEINKESVESL 328 + KA L ++ + ++ + ++ + + R E N + + Sbjct: 229 EPAKAVEALSQVLDQD--KDLVSEVLPMMHDCYQQLNQPEQWVAFLRRCVEENTGAA-AE 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQA 370 ++++++ + I+ A ++ P + L+ A+ E+ Sbjct: 286 LMLAEVLEQNEGIEAAQVYVGRQLQRHPTMRTFYRLMDYHLAEAEEG 332 >gi|206974986|ref|ZP_03235901.1| TPR domain protein [Bacillus cereus H3081.97] gi|229155184|ref|ZP_04283296.1| hypothetical protein bcere0010_13770 [Bacillus cereus ATCC 4342] gi|229195820|ref|ZP_04322579.1| hypothetical protein bcere0001_13830 [Bacillus cereus m1293] gi|206747005|gb|EDZ58397.1| TPR domain protein [Bacillus cereus H3081.97] gi|228587593|gb|EEK45652.1| hypothetical protein bcere0001_13830 [Bacillus cereus m1293] gi|228628311|gb|EEK85026.1| hypothetical protein bcere0010_13770 [Bacillus cereus ATCC 4342] Length = 434 Score = 53.0 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|289665019|ref|ZP_06486600.1| tetratricopeptide repeat family protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 690 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 63/198 (31%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + +PD + + + A+ ++ E Sbjct: 6 LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPALALDSIDTALMLTPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ + L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + + L R E + L + L+ Sbjct: 122 LSRTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 182 EHFAFAERAFERVIELNP 199 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 85/291 (29%), Gaps = 14/291 (4%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + S + + ++LL LA R + A L + + A Sbjct: 46 GQPALALDSIDTALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVM 105 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + GDL+ A+R + A ++P+ P + VV+ + RA++ L + + Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLALDGVVEMRRGQSD--RALSLLTRAAEQ 163 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A +L + K + ++L I A+ Q + Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGIALRAFIAQLAQRQGRLD 219 Query: 278 KAEV----ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A +LE+ P L + +L + Sbjct: 220 DALAAMQGVLEQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLT 279 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 +G++D A A+ + L LA I W Sbjct: 280 AWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 7/163 (4%) Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291 L+ + + A E + + A A +L Q + A ++ + P Sbjct: 6 LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPALALDSIDTALMLTPED 65 Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 H A + R ++ + V+ + +A+ G +D+A + Sbjct: 66 ADLHLLRAGALLATRDLSAAD--AALSRTTALDPNQFNAYVMQAHLAVARGDLDEAERLS 123 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A ++AP L L + + +D+ L A +PD Sbjct: 124 RTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPD 166 >gi|183221734|ref|YP_001839730.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167780156|gb|ABZ98454.1| Putative protein with TPR repeats [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 372 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 5/158 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + ++ A E + FA+Y L D +A Y K L+ PD + Sbjct: 206 KDFDKAILYYERAKDLDPKNFFALYGLAESYRGKKDFKTAITYWEKILESDPDNKLIINR 265 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + +A+ N+ + ++ L+ ++ GD+ + + L Sbjct: 266 YADSLRGLGNYDKALECFNKILASGDDY-----FALLGKAAALRLIGDLEKAEEIYLGLL 320 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 N ++ + KK +A +LE + K NP Sbjct: 321 SKSPNDPRPALELSDLWDIMGKKPQAIKLLEDLAKKNP 358 >gi|23013697|ref|ZP_00053564.1| COG3914: Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Magnetospirillum magnetotacticum MS-1] Length = 659 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 11/178 (6%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSA 173 + + L + + + A + ++ A + + G + A Sbjct: 4 DPALLLQRAEALHNQGRVEEADRLYQDLITQAPQSPEAAKALTNRG--VIAQGGGRTDEA 61 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 +AL + P + W+ A + K + + A + + Sbjct: 62 LDLHGRALALVPGLAEGWCNRGDLFSDLGRWNEAQADFARAAKLSPQL--LPAWFNLGNA 119 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 G+ A+ +L+L + + A+ L + + ++A +E ++ P Sbjct: 120 RLQL--GEAAAAEVCYRRALELAPHLPVIHAQLARCLDALGRAQEAADAMEAASRLAP 175 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 60/203 (29%), Gaps = 7/203 (3%) Query: 86 KALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 KAL G+++ A +H E + ++N A Sbjct: 43 KALTNRGVIAQGGGRTDEALDLHGRALALVPGLAEGWCN--RGDLFSDLGRWNEAQADFA 100 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 ++ A ++L ++G+ +A+ +AL+++P P + + + Sbjct: 101 RAAKLSPQLLPAWFNLGNARLQLGEAAAAEVCYRRALELAPHLPVIHAQLARCLDALGRA 160 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A + + A R L G + A+ ++ L A Sbjct: 161 QEAADAMEAASRLAPGDWRM----LTDLGALQQQAGRITAAKESLRSAISLNPAHASAHY 216 Query: 265 CAAKSLISQNKKRKAEVILEKIW 287 + + +A + W Sbjct: 217 NLGNVFYGEGRATEACACWQAAW 239 >gi|332974869|gb|EGK11783.1| tetratricopeptide (TPR) domain protein [Kingella kingae ATCC 23330] Length = 391 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 106/353 (30%), Gaps = 58/353 (16%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----RE 154 N A + S V+Q +E + L ++ + + A + +L P T RE Sbjct: 57 NKTAAARYLSEVAQMQNNAHE--LNLSLGKLYRQHGKNDKAIALHKALLDSPDTVNEKRE 114 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLN 212 +Y L + G ++ A++ L + A E ++ Y ++W +AI Sbjct: 115 RVLYELGLDYKSAGLVDRAEQTF---LGLQSSNMAKQANEWLLNIYQQDRDWEKAIATAQ 171 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + A G++ A+ +L A+I Sbjct: 172 LLAHDEQTYQFEIAQFYCEIGQNQFFHGNLNAAQEAMQAALLANPKCTRANILLGDIHQK 231 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKL--------------KRAL 315 + R A I K N Y ++ E + L K Sbjct: 232 EGNYRSAIDAYTAIEKQN------YAYLTMVGEKLYDAYEALGEAQAGLDVLIGYAKAFP 285 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQA 370 +++ +N +SL++ + A+ A+ ++ P ++ L + + Sbjct: 286 QIDFLNVIYDKSLLLHGEA--------VANETALDLIRSKPDLNGMYRLIGLSMPDLNSQ 337 Query: 371 NSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV-----WLPLSPISKTLCYF 418 + D + L W+ + W P F Sbjct: 338 WKADADMMRGVLNRQLQ----KTWMYRCQHCHFKSQVYFWH--CPACNKWETF 384 >gi|16550822|dbj|BAB71057.1| unnamed protein product [Homo sapiens] Length = 645 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 253 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 309 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 310 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 369 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 370 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 429 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 430 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 485 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 486 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 544 Query: 389 MPDP 392 DP Sbjct: 545 PKDP 548 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 386 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 443 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 444 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 501 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 502 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 555 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 556 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 591 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 592 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 633 >gi|17547074|ref|NP_520476.1| protein porphyrin biosynthesis [Ralstonia solanacearum GMI1000] gi|17429375|emb|CAD16062.1| putative protein porphyrin biosynthesis [Ralstonia solanacearum GMI1000] Length = 397 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 118/400 (29%), Gaps = 18/400 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S +L+ L LL Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLASLVLVFVVLHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + + AL + S+ A A ++ Sbjct: 61 LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQA--WEPQRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E A + ++ L ++ D + A Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236 + ++ + K W+ + +K + A L + +L Sbjct: 176 QLQAQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHSVLAARLKQMACETLLQ 235 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D A E S + AA + +A+ I+E + + + Sbjct: 236 ERRHDTDALNDFWRELTTEERRSPRIASQAALYFAQLGRTDEAKRIVEDALRAHWDGRLI 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + +++A + + + + + + +A + A+K A Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLAQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355 Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R L LAQ+ + + ++ QSAL A Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRQEEAQRHFRQSALLA 395 >gi|115376717|ref|ZP_01463944.1| adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1] gi|115366266|gb|EAU65274.1| adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1] Length = 475 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 87/239 (36%), Gaps = 9/239 (3%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E V + Q Y K + L+ A A Y+L + R G + A+ + Sbjct: 61 EDAVKAFDAQKKAKAFDYPSLDRKFKAALEADANIAEADYNLGVIAERQGKKDEAKTWYQ 120 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 AL P +E + + A+ K + ++RA L + Sbjct: 121 SALKKKPSLRQASENLAVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL----AEIYRQ 176 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297 GD + + +L S A +S + + + A+++ + K++ + PE+ + Sbjct: 177 TGDHDRAMEFSRAALMREPQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHH 236 Query: 298 IYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + +L+ R E ++ V S ++++++ALE A ++ Sbjct: 237 TIGLILQQEGDADGARLQ-FKRALETREDYVPSHIVLAQLALEAEDYPGAEEHLRRILQ 294 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 79/232 (34%), Gaps = 10/232 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 +M+ +I A ++ V +++ + L +I ++ A E L Sbjct: 137 AVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL--AEIYRQTGDHDRAMEFSRAALMRE 194 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ + L A+ A +AL + + P + + + A Sbjct: 195 PQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHHTIGLILQQEGDADGARLQ 254 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + +++ + +L +LE D +++ A + + Sbjct: 255 FKRALETREDYVPSHIVLA-QLALEAEDYPGAEEHLRRILQAGAKS---AAAHVNLGIAY 310 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEI 320 Q + KA + K++ P++A IY + ++ +RA+ L + Sbjct: 311 KGQGQYDKAMQEYDAAEKLD--PKVAAIYLNRAVILHQAKDAPERAVELYKK 360 >gi|284052765|ref|ZP_06382975.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira platensis str. Paraca] gi|291565858|dbj|BAI88130.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 370 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 120/352 (34%), Gaps = 22/352 (6%) Query: 36 LYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSI 95 +++T+ ++ ++L ++ AV++ P +L + N ++ L G + Sbjct: 1 MFKTTKLLVSNVLLAIAATVFVVPAVAQ----PPQILAQATSQANINELNDLLQKGRDLV 56 Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + N+ A ++ Q + + L VQ + A + + + Sbjct: 57 NSGNMDEALNVYLQAVQLESSDAKIYSALAYVQA--LRGDFEAAAKFYRDAITLDPQNAD 114 Query: 156 AVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 Y L Y + +AQ Y +A + D + +++ AI Sbjct: 115 FYYGLGYTLARLQDYPAAAQAY-RRATQLQRDNINAHLGLAASLFRQQDYRGAIEAYQTA 173 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 A E N A + + +G+ S ++++L N + + + Q Sbjct: 174 L--ALEPNNWEANASLGMA--WLRQGNASQSLQFLQQAMELAPNQPNIYLKLGIAYLEQG 229 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + A ++ +++P +I I+ L EN G ++ + + + V + + Sbjct: 230 DRTAALDAFQEAARLSPFNGEIQFQIGEIFR--LQENFEGAMQAYQQALAMEPDLVAANM 287 Query: 330 IVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + +I L + A +A P +L LA E+ Sbjct: 288 AIGEIQLRLRDYIGAIVSFRRAADRFADQPSVHYYLGLALKERGGREPQAIA 339 >gi|196039128|ref|ZP_03106435.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99] gi|301053156|ref|YP_003791367.1| TPR-repeat-containing protein [Bacillus anthracis CI] gi|196030273|gb|EDX68873.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99] gi|300375325|gb|ADK04229.1| TPR-repeat-containing protein [Bacillus cereus biovar anthracis str. CI] Length = 420 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|90021079|ref|YP_526906.1| hypothetical protein Sde_1432 [Saccharophagus degradans 2-40] gi|89950679|gb|ABD80694.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40] Length = 259 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 4/159 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L + A L+ A L G++ +A++ KAL D Sbjct: 46 TYLQKGDRENALRAFSKALETDKKSAEANQGLALVHQLNGEVEAAEKSFQKALKGRADFS 105 Query: 189 WVTEAVV--QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + + A ++ +R A+ + L + GD + + Sbjct: 106 MAGVELSYGRFLFEQERYKEAKEHFEMASQDLTFQSRANALYFVG--LTSQKIGDEVRAL 163 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L L A+I A+ ++ A+ L++ Sbjct: 164 AAFQHALNLNPRLAPAAIELAEYSFAERDYASAKKYLDQ 202 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 4/119 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---RE 154 + A K + + V L + + +Y A E E M T R Sbjct: 85 GEVEAAEKSFQKALKGRADFSMAGVELSYGRFLFEQERYKEAKEHFE-MASQDLTFQSRA 143 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+Y + S +IGD A AL+++P + + ++++ A +L+Q Sbjct: 144 NALYFVGLTSQKIGDEVRALAAFQHALNLNPRLAPAAIELAEYSFAERDYASAKKYLDQ 202 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 67/200 (33%), Gaps = 23/200 (11%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y+ + A+ ++ E ++ A +L + G++ A+ ++LK Sbjct: 47 YLQKGDRENALRAFSKAL----ETDKKSAEANQGLALVHQLNGEVEAAEKSFQKALKGRA 102 Query: 258 NSIMASI--CAAKSLISQNKKRKAEVILEKIWKVNPHPEI-------ANIYTHLLS---E 305 + MA + + L Q + ++A+ E + ++ A + L S Sbjct: 103 DFSMAGVELSYGRFLFEQERYKEAKEHFEMASQ-----DLTFQSRANALYFVGLTSQKIG 157 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLL 363 + V L +N + + +++ + A ++ R+ L Sbjct: 158 DEVRALAAFQHALNLNPRLAPAAIELAEYSFAERDYASAKKYLDQFVRSNNRQTPRSLWL 217 Query: 364 LAQIEQANSHNTDKILYWTQ 383 +IE+ + + Y Sbjct: 218 GIRIERIFGNKDKEASYALA 237 >gi|308275079|emb|CBX31678.1| hypothetical protein N47_E51900 [uncultured Desulfobacterium sp.] Length = 801 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 65/190 (34%), Gaps = 9/190 (4%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 AE Y A + E L + A+ + L+ A K + ISP Sbjct: 524 AENNYKEAVKYFEKSLSVNPDYFPAMNMIIKIKLNEKKLDEALARCFKQVGISPKNT-AF 582 Query: 192 EAVV-QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ Q YVL K+ A + +L+A + +G + + Sbjct: 583 RLMLGQLYVLKKDPEAARNSFETALTINPDSRE----VLMAYANFEMSQGAIDQAILKYE 638 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENT 307 + ++ +I A + +K+ I E++ K P +A+ Y + E T Sbjct: 639 KLRSNNPDNPGYAILTAGLYEKKGDIKKSRQIYEEVLKKYPGHILASNNLAYYYAEYEPT 698 Query: 308 VGKLKRALRL 317 L +A L Sbjct: 699 KENLDKAESL 708 Score = 44.2 bits (103), Expect = 0.055, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 25/261 (9%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + IA + + +L T A + L R ++ A+ L +PD Sbjct: 422 LNGEPAIAEDIYKKLLVQNDTLRSARFGLANIYQRTNKIDMAKEQMQIILKKNPDDIEAL 481 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHD 248 + +L+K +AI++ + K+ N ++ A + + + Sbjct: 482 VMMGDLEILSKNQRKAISYYEEVIKHDPGSVTANYKMGVMHAA-------ENNYKEAVKY 534 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILE--------KIWKVNPHPEIANIY 299 +SL + + A K +++ K +A + +++ + +Y Sbjct: 535 FEKSLSVNPDYFPAMNMIIKIKLNEKKLDEALARCFKQVGISPKNTAFRLM----LGQLY 590 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + IN +S E L+ + + G+IDQA K P Sbjct: 591 V-LKKDPEAAR-NSFETALTINPDSREVLMAYANFEMSQGAIDQAILKYEKLRSNNPDNP 648 Query: 360 IFLLLAQIEQANSHNTDKILY 380 + +L + K Sbjct: 649 GYAILTAGLYEKKGDIKKSRQ 669 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 56/147 (38%), Gaps = 8/147 (5%) Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + D I + + +L++ A I + RKA K +++ PE+ + Sbjct: 45 ENSDYIKAGLEFKNALQIDPKFAQAYYMLGMIEIKATEFRKAFGDFSKAVELD--PELLD 102 Query: 298 IYTHLLSENTVGKLK-----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + KLK + + + ++L++ + + + G + ++ + Sbjct: 103 AQIQLGNIYLLAKLKDKANEKLELVISKKPDYPDALLLKAGLLMADGKLTESETVLKQII 162 Query: 353 KIAP-RKEIFLLLAQIEQANSHNTDKI 378 P ++E + +LA I++ Sbjct: 163 NSNPKKEEAYFMLAAIKRIQKDIAGVA 189 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 14/199 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+M A +N A K + + + ++++++ + +A + + P Sbjct: 519 GVMHAAENNYKEAVKYFEKSLSVNPDYFPAMNMIIKIKLNEKKLDEALAR-CFKQVGISP 577 Query: 151 A-TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 T + LY D +A+ AL I+PD+ V A + +AI Sbjct: 578 KNTAFRLMLGQLYVLKK---DPEAARNSFETALTINPDSREVLMAYANFEMSQGAIDQAI 634 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----SI 264 +K ++ N AIL KGD+ S E LK I+A + Sbjct: 635 -LKYEKLRSNNPDNPGYAILTAGL---YEKKGDIKKSRQIYEEVLKKYPGHILASNNLAY 690 Query: 265 CAAKSLISQNKKRKAEVIL 283 A+ ++ KAE ++ Sbjct: 691 YYAEYEPTKENLDKAESLI 709 >gi|329850849|ref|ZP_08265694.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] gi|328841164|gb|EGF90735.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] Length = 612 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 70/264 (26%), Gaps = 13/264 (4%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREF 155 N A K + LV L + + ++ ++ Sbjct: 12 TGNPVFAPKPSVTAIALGAENAVPLVGAGLVDPASQILGDSASSESLKRLISSTDRIKQI 71 Query: 156 AVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 L E+ + GD A KAL + + + A + AIT Sbjct: 72 DTLILLKEALVMFKRGDWIRGGELALKALHVDEKSAQAWHVLAIAREKAGDLKTAITCFE 131 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + E A + + + L N A A L Sbjct: 132 TALRISPE----DAYIANDLGRLAFRLSLNDLAQKFFLHFLASFPNHPEAMNNLASVLRE 187 Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIY---THLLSENTVGKLKRALRLEEINKESVESL 328 +N A +L+ +P P++ N + + + L + + + Sbjct: 188 KNDLDGAIEVLQTAIAAHPEDPQLWNAIGTVVNARGDTETAGVFYQEAL-KFDPDHCHGN 246 Query: 329 VIVSKIALEMGSIDQAHAKAMLAM 352 + +G D+A A+ Sbjct: 247 YNYGNVLTSLGRFDEARRYFDHAL 270 >gi|119617004|gb|EAW96598.1| hCG2009560, isoform CRA_a [Homo sapiens] Length = 618 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 226 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 282 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 283 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 342 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 343 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 402 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 403 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 458 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 459 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 517 Query: 389 MPDP 392 DP Sbjct: 518 PKDP 521 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 359 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 416 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 417 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 474 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 475 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 528 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 529 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 564 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 565 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 606 >gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101] gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101] Length = 1737 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 33/282 (11%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 G ++AA + A ++ + + + L +L A ++ A + Sbjct: 18 QGQQAVAAGQLEKAVTLYKKTIELNPNLALYQQNLGDVL----AKI-GKWEEAATVYQKA 72 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 +++ T + Y+L + G L A ++A+ I+P+ + ++ V Sbjct: 73 IELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYISLGSALVQKGLLYE 132 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 AI + E +I + +G + +++++ Sbjct: 133 AIANFQKAISLEPES----SIAHQNLGVALEKQGQIEEGIICYRKAIEIDPGFWEGYQKL 188 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR----------ALR 316 +L Q + +A I K ++ P A +Y H T+ KL+R A++ Sbjct: 189 GIALTKQGEFHQAAKIYLKACQII--PNSATVYHHY--GETLAKLRRWDEAIAAYRQAIK 244 Query: 317 LEEINK--ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LE + V+ K ++A + A+KI P Sbjct: 245 LEANSPVIYHQFGYVLTQK-----QQWEEAISAYRQAIKIKP 281 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 29/236 (12%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYS----LYFESCRIGDLNSAQRYATKALDISPDAPWV 190 +++ A +++ A +Y + + + A +A+ I P++P V Sbjct: 231 RWDEAIAAYRQAIKLEANSPV-IYHQFGYVLTQKQQ---WEEAISAYRQAIKIKPNSPDV 286 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMIASYHDA 249 + + W A+ +K + N +L + + I +Y A Sbjct: 287 YHHLGDALTQQQNWEEAVGA-YRKVTELQP-NSPEVYHYFGYALSQLQQWEEAIVAYRKA 344 Query: 250 IESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 E + + +LI + A V L + ++N P +A Y L Sbjct: 345 SELQPNSPD-----VHHQLGHALIELKQNDWAVVELRQAVELN--PNLAEAYRDL--GRA 395 Query: 308 VGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +K+ E+N E + K D+A A+K+ P Sbjct: 396 LSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQWDEAIVNYGHALKLNP 451 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 79/215 (36%), Gaps = 19/215 (8%) Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A L I + A A++++P+ V + + Y K+W AI Sbjct: 388 AYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQWDEAIVNYGHAL 447 Query: 216 K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLIS 272 K N K + + L + D D I SY AIE A I +L Sbjct: 448 KLNPKLPEVHHNLALTLVQQQKFD--DAIVSYGQAIE-----LGINTAEIHHQLGHTLSK 500 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV------GKLKRALRLEEINKESVE 326 + +A + + ++N P A +Y H+L E+ + + +++ +S + Sbjct: 501 LKRWDEAVISYRQAAEIN--PNSAAVY-HVLGESLAQLEKWDEAVAAYTKASQLHPKSAD 557 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + ++ +G D+A A+++ P F Sbjct: 558 VRYHIGEVMSRLGRWDEAVEAYGKAVELRPSSAKF 592 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 64/197 (32%), Gaps = 13/197 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + D A +A++++P+ + + K+W AI + Sbjct: 365 LKQNDW--AVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEV 422 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-----KRKA 279 L A + + + + +LKL A +L+ Q K Sbjct: 423 YGYLGKAYASQK----QWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYG 478 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + I I H ++ + + L + + + EIN S ++ + ++ Sbjct: 479 QAIELGINTAEIHHQLGHTLSKLKRWDEA--VISYRQAAEINPNSAAVYHVLGESLAQLE 536 Query: 340 SIDQAHAKAMLAMKIAP 356 D+A A A ++ P Sbjct: 537 KWDEAVAAYTKASQLHP 553 >gi|49477257|ref|YP_035735.1| TPR repeat-containing protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328813|gb|AAT59459.1| TPR-repeat-containing protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 420 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|326511269|dbj|BAJ87648.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 842 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 11/193 (5%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257 + A + A+ N A +L + +G ++ + E+ LC Sbjct: 316 GRHAEAKEEFLLALEAAEAGNSQSADILPQIHVNLGIAMEAEGMVLGACEHYREAAILCP 375 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 + A +L + R AE LE+ + P H ++ + H + ++ ++ Sbjct: 376 SHARALKLLGSALFGVGEYRAAEKALEEAIFLKPDYADAHCDLGSA-LHAVGDDDRA-VE 433 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 + ++ V++L + + ++ G +A + I P L + Sbjct: 434 EFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQ 493 Query: 373 HNTDKILYWTQSA 385 +++ + A Sbjct: 494 GESEEAKKALKEA 506 >gi|326510261|dbj|BAJ87347.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 842 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 11/193 (5%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257 + A + A+ N A +L + +G ++ + E+ LC Sbjct: 316 GRHAEAKEEFLLALEAAEAGNSQSADILPQIHVNLGIAMEAEGMVLGACEHYREAAILCP 375 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 + A +L + R AE LE+ + P H ++ + H + ++ ++ Sbjct: 376 SHARALKLLGSALFGVGEYRAAEKALEEAIFLKPDYADAHCDLGSA-LHAVGDDDRA-VE 433 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 + ++ V++L + + ++ G +A + I P L + Sbjct: 434 EFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQ 493 Query: 373 HNTDKILYWTQSA 385 +++ + A Sbjct: 494 GESEEAKKALKEA 506 >gi|316973197|gb|EFV56817.1| putative tetratricopeptide repeat-containing domain protein [Trichinella spiralis] Length = 556 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 43/137 (31%), Gaps = 8/137 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E G +A K LD+ EA+V ++ + A + L+ Sbjct: 325 LMSE---RGSTETAVSLLRKTLDMDRTRFEAYEALVNMFLKNGNLNEAESTLHNCMNALG 381 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 A +L + + +LKL N + A A I A Sbjct: 382 ----GTAPVLALCAKVLLNNNHEQQGMQTLNHALKLAPNYLPAICTLADYYIKNYDYELA 437 Query: 280 EVILEKIWKVNP-HPEI 295 E L V P HPE+ Sbjct: 438 EAKLTTAMSVYPSHPEL 454 >gi|115380381|ref|ZP_01467379.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310822651|ref|YP_003955009.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115362616|gb|EAU61853.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309395723|gb|ADO73182.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1] Length = 622 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 5/184 (2%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 AR E YL+ Q L R + A + +E + L Sbjct: 138 ARARLHLRRAMALRPQEPEAYLILAQSYLETRDPDEAVKVVEALAAALPGESSGYRRLGL 197 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 GD + A+R +A + P + + Y S A L++ + + + Sbjct: 198 ALAERGDRSRAERLLARATERDPGDVEAWVTLARLYEAGGRLSHAEEALSRSLER--DAD 255 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +L R +Y D + SL ++ A + ++ + A + Sbjct: 256 NRDVLLSAGRLALKLGSATRARAYFDRLLSLSNDPEL---TVKVAFAFLASRETAAAAEV 312 Query: 283 LEKI 286 L+ Sbjct: 313 LDMA 316 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 9/171 (5%) Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LL E A G++ + + +++ A + ++L+ + +A + L + Sbjct: 88 YLLTQLGEEYARLGELAKAERELRRAVERSPQYYPAHVMLGRTLLEGKRYARARLHLRRA 147 Query: 287 WKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P PE +A Y + +K L + E G Sbjct: 148 MALRPQEPEAYLILAQSYLETR--DPDEAVKVVEALAAALPGESSGYRRLGLALAERGDR 205 Query: 342 DQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +A A + P E ++ LA++ +A +L D Sbjct: 206 SRAERLLARATERDPGDVEAWVTLARLYEA-GGRLSHAEEALSRSLERDAD 255 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 76/241 (31%), Gaps = 9/241 (3%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 N YL+ L + A + A +L ++ A L A+ + Sbjct: 85 GNPYLLTQLGEEYARL-GELAKAERELRRAVERSPQYYPAHVMLGRTLLEGKRYARARLH 143 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +A+ + P P + Q Y+ ++ A+ + + L +A + Sbjct: 144 LRRAMALRPQEPEAYLILAQSYLETRDPDEAVKVVEALAAALPGESSGYRRLGLALA--- 200 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE- 294 ++GD + + + + A + A+ + + AE L + + + + + Sbjct: 201 -ERGDRSRAERLLARATERDPGDVEAWVTLARLYEAGGRLSHAEEALSRSLERDADNRDV 259 Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ L + RL + E V V+ L A +A + Sbjct: 260 LLSAGRLALKLGSATRARAYFDRLLSL-SNDPELTVKVAFAFLASRETAAAAEVLDMARR 318 Query: 354 I 354 Sbjct: 319 S 319 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 93/291 (31%), Gaps = 45/291 (15%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 ++ S++ + L+ ++ ++ A ++L + L + + L E R Sbjct: 40 NARESEERYSSPASYAHFLQSRLMHHTGEHRAAVDELRLALATNEGNPYLLTQLGEEYAR 99 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 +G+L A+R +A++ SP ++ A L + K + R R Sbjct: 100 LGELAKAERELRRAVERSP-----------------QYYPAHVMLGRTLLEGKRYARARL 142 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L ++ L A + A+S + +A ++E + Sbjct: 143 HL---------------------RRAMALRPQEPEAYLILAQSYLETRDPDEAVKVVEAL 181 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P + + + +L R E + VE+ V ++++ G + Sbjct: 182 AAALPGESSGYRRLGLALAERGDRSRAERL--LARATERDPGDVEAWVTLARLYEAGGRL 239 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 A +++ LL A + + + L DP Sbjct: 240 SHAEEALSRSLERDADNRDVLLSAGRLALKLGSATRARAYFDRLLSLSNDP 290 >gi|328949628|ref|YP_004366963.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] gi|328449952|gb|AEB10853.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] Length = 504 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 17/176 (9%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q E A E+ L A+ L G A+ Y + ++P Sbjct: 30 QALYQEGDLESAAATCELALTADERFVPALKLLARIHLDRGQPKEAEAYLERLTALTPTD 89 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR------SLENADKGD 241 P V V + + + A+T L +++ W + +A+ + R +L+ A + Sbjct: 90 PEVGVLVARHRLAVGRPAEALTLLADRREAEALWLKGQALAALGRYPEALEALQAAWEAG 149 Query: 242 MIASYHDAI----------ESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKI 286 + + DA E+L + + ++ + L++ + A +LE Sbjct: 150 EVRARLDAARVYERLGRPTEALAVLPEAGPEVAVLRGRLLLAAGELDAAARVLEDT 205 >gi|326666512|ref|XP_001922025.3| PREDICTED: transmembrane and TPR repeat-containing protein 1 [Danio rerio] Length = 872 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 115/369 (31%), Gaps = 49/369 (13%) Query: 27 DVSITWGNRLYRTSPFVILSILYFFLF----AWILLFAVSR-FFLSCPAMLFHMLHKRN- 80 V WG S V+L + + W+ A+ R + P + N Sbjct: 429 SVVSRWGAAALTVSMLVVLLLFSWKTVQQNEIWLSREALFRSGIQTLPHNAKVHYNYANF 488 Query: 81 -YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYN 137 DKG A + + + H L L L Q Sbjct: 489 LKDKGRN--------------QEAIYHYKTALRLYPRHASALNNLGTLTHQA-------E 527 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A L I A+++L G A+R +++ P ++ Sbjct: 528 EAEVYYRRALDINPQHNRALFNLGNLLKSQGKEEEAERMLKESIRFGPHFADAYSSLASL 587 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y A + +N E + L + D G + E+++L Sbjct: 588 YADQGHSKEANEIYTKGIENCPESSD----LHNNYGVFLVDTGRGDRAAFHYQEAVRLKP 643 Query: 258 NSIMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 +A + + L S N ++A ++ K+ + P + +Y + E + Sbjct: 644 AHYVAMVNLGRLLRSSNDNKEAELWYKRALQVVRKVDILTP---LGALYYNTGRYEEALE 700 Query: 310 KLKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + A L +S + + +++ +A+ S + + K + E + LL+ I Sbjct: 701 VYREASTL---QPDSTDIWLALAQVLAMAGRSTEAEKMTLGIISKTSNCIECYRLLSAIY 757 Query: 369 QANSHNTDK 377 ++T+ Sbjct: 758 SKQGNHTEA 766 >gi|228932907|ref|ZP_04095772.1| hypothetical protein bthur0009_13780 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826710|gb|EEM72479.1| hypothetical protein bthur0009_13780 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 434 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 298 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|66768248|ref|YP_243010.1| tetratricopeptide repeat protein [Xanthomonas campestris pv. campestris str. 8004] gi|188991384|ref|YP_001903394.1| tetratricopeptide repeat protein [Xanthomonas campestris pv. campestris str. B100] gi|66573580|gb|AAY48990.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733144|emb|CAP51342.1| putative peptide glycosyltransferase [Xanthomonas campestris pv. campestris] Length = 392 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 90/303 (29%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI + ++ + + + + G + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGVGKPDEALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + Y + Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L + A + L + + +P + G + W P K Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|33152754|ref|NP_874107.1| HemY protein [Haemophilus ducreyi 35000HP] gi|33148978|gb|AAP96496.1| HemY protein [Haemophilus ducreyi 35000HP] Length = 413 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 45/142 (31%), Gaps = 2/142 (1%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ ++ + + ++ V I +++ S +++ + ++ Sbjct: 1 MFRVLFLMLLLLAGLVAGPYLAGSQGYVRIETDSKVIEMSLVMLVVFFIMAMSMVYIIEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + R + + GLM + A K+ S ++ + Sbjct: 61 TIIRFFRLSKGSYSWFFHRKQKQAQQETLEGLMKFREGDYSKAEKLFSKNAKHA--GSPI 118 Query: 121 LVYLLEVQIALAERQYNIAHEK 142 L + + A A++ Sbjct: 119 LNLIKAAEAAQQRGDEFNANKY 140 Score = 45.7 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 184 SPDAPWVTEAVVQQYV--LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + ++ + ++S+A ++ K+A + LI + +GD Sbjct: 78 HRKQKQAQQETLEGLMKFREGDYSKAEKLFSKNAKHAGSP----ILNLIKAAEAAQQRGD 133 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + IE+ +L NS++ + AK L+ QNK A ++ + ++ P Sbjct: 134 EFNANKYLIEASQLSPNSVVVELTRAKILVQQNKLPAARSAIDSLIELAP 183 >gi|310822887|ref|YP_003955245.1| adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1] gi|309395959|gb|ADO73418.1| Adventurous gliding protein T [Stigmatella aurantiaca DW4/3-1] Length = 474 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 87/239 (36%), Gaps = 9/239 (3%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E V + Q Y K + L+ A A Y+L + R G + A+ + Sbjct: 60 EDAVKAFDAQKKAKAFDYPSLDRKFKAALEADANIAEADYNLGVIAERQGKKDEAKTWYQ 119 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 AL P +E + + A+ K + ++RA L + Sbjct: 120 SALKKKPSLRQASENLAVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL----AEIYRQ 175 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297 GD + + +L S A +S + + + A+++ + K++ + PE+ + Sbjct: 176 TGDHDRAMEFSRAALMREPQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHH 235 Query: 298 IYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + +L+ R E ++ V S ++++++ALE A ++ Sbjct: 236 TIGLILQQEGDADGARLQ-FKRALETREDYVPSHIVLAQLALEAEDYPGAEEHLRRILQ 293 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 79/232 (34%), Gaps = 10/232 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 +M+ +I A ++ V +++ + L +I ++ A E L Sbjct: 136 AVMAQNNGDIGGAVALYQDVLKRYPDDAQSRARL--AEIYRQTGDHDRAMEFSRAALMRE 193 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ + L A+ A +AL + + P + + + A Sbjct: 194 PQSTTALKVMMRSYLDRKQLAMAKLVALRALKLDENDPELHHTIGLILQQEGDADGARLQ 253 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + +++ + +L +LE D +++ A + + Sbjct: 254 FKRALETREDYVPSHIVLA-QLALEAEDYPGAEEHLRRILQAGAKS---AAAHVNLGIAY 309 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEI 320 Q + KA + K++ P++A IY + ++ +RA+ L + Sbjct: 310 KGQGQYDKAMQEYDAAEKLD--PKVAAIYLNRAVILHQAKDAPERAVELYKK 359 >gi|229096110|ref|ZP_04227083.1| hypothetical protein bcere0020_13580 [Bacillus cereus Rock3-29] gi|228687070|gb|EEL40975.1| hypothetical protein bcere0020_13580 [Bacillus cereus Rock3-29] Length = 434 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 33/268 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKELMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + ++ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELAVPFYVELASIAAKLGKVAEAEEVL 308 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340 +K L + LK A L+ K E L+ V + A++ G Sbjct: 309 QKA-------------LELDPGHLGAILKYAYILKGQEK--YEELITVVERAIDSGEPDT 353 Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 354 QLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|227113872|ref|ZP_03827528.1| cellulose synthase subunit BcsC [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 1526 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 115/327 (35%), Gaps = 44/327 (13%) Query: 91 GLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEYLVY-------LLEVQIALAERQYNI 138 GL+ + A + A + + + V++ ++ E L+ + E AL + Sbjct: 681 GLVYLRAGDRVKALAQFQKALQADVNRLNSGKWEGLIKSTQYWTTIAEGDNALKANNLPL 740 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + Q+ T +A+ L + + +AQ +AL + P +V Y Sbjct: 741 ARQKYQQARQMDNTNPYALIGLGDVAVASQNDTAAQPLYQQALHLEPGNDNALRGLVGIY 800 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI------ARSLENADKGDMIASYHDAIES 252 +A+T+LN +++ + + ++ + A++ + ++ Sbjct: 801 QRQSP-EKALTYLNS-LSRSQQNTMRDTLTALQLNILKQQADQLAEQQQWTQAEEKYRQA 858 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-- 310 + N I + A++L + ++A+ ++++ V P + Y + L ++ + Sbjct: 859 NQQDPNDIWFAYRYAQTLRQLGQMQQADSVVQRATAVPPA-DAQKNYVYSLYLSSTNRDE 917 Query: 311 --LKRALRLEEINKESV----------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L L ++ + ++ + G A A Sbjct: 918 QALAHLNTLSAAQWSDDMRDLSQRLTIQTTLAKAEAMRDAGDESAAIAFLRQQPANT--- 974 Query: 359 EIFLLLAQ--IEQAN----SHNTDKIL 379 I LLLA + + + +I Sbjct: 975 RIDLLLADWALARGEYATALADYQRIR 1001 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 37/245 (15%) Query: 144 EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + ML P TR + SL + G ++ AL +P+ P + AV Y+ Sbjct: 265 QKMLADPTYQTR---LRSLA-QGESRGGNSAMLNELNNALAATPNTPELIGAVALVYLRE 320 Query: 202 KEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + +A+ + + + R ++ + KGD +A+++ L N Sbjct: 321 GDRKKALEQFQKALQVDMSRLHSGRWEGLIQNTQDWTTIAKGD------NALKANNLALN 374 Query: 259 SIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR- 313 + + A ++ ++ +P + L + + R Sbjct: 375 WLRLLPLLLVTAPQAYSAE--------------TTSPEQFLMEQ-VRLGEASNKDDIVRQ 419 Query: 314 -ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 RLE IN ++ E + ++AL G QA + +AP ++ A+I A + Sbjct: 420 SLHRLELINPDNPEVIAARLRLALRQGDQAQARQQLDKLKAVAPDSALYR-QAEITLALT 478 Query: 373 HNTDK 377 T + Sbjct: 479 QETAR 483 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 6/134 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + + A L L + G+ +A + Sbjct: 946 TTLAKAEAMRDAGDESAAIAFLRQQPANTRIDLL----LADWALARGEYATALADYQRIR 1001 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKG 240 P P + ++ A LNQ + A N R + +++ N K Sbjct: 1002 TREPQNPDAQLGEIDAFIAQGRQDDARQRLNQLPAQAADTLNAQRHVANAWQAVGNPQKS 1061 Query: 241 DMIASYHDAIESLK 254 I++ K Sbjct: 1062 -TALFRQLKIDAQK 1074 >gi|197335049|ref|YP_002156578.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11] gi|197316539|gb|ACH65986.1| tetratricopeptide repeat family protein [Vibrio fischeri MJ11] Length = 389 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 94/294 (31%), Gaps = 51/294 (17%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A K+H + + T + + + + A + E +L+ P R Sbjct: 83 GEVDRAIKIHQNLIARPNLTIDQRNIALQQLAKDYMVSGILDRAEKIFEQLLEEPDHR-- 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A + +V + +EW +AI F N Sbjct: 141 -----------------------EAALLQ---------LVAIHQQTREWEQAIQFANSLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + ++ + A +++ + + + ++L + + ASI AK L+ ++ Sbjct: 169 RMGRKKLKLDIAHYYCELAMQELADENSNKAKQNLKKALSSDNQCVRASIMMAKLLMEED 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVES 327 + A V LE + + P +A Y L E + LK + + S E Sbjct: 229 NYKGALVHLESVLDQDIDFVSEALPLLAECYEKLDREGALLQFLK--EAISKGAGASAE- 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILY 380 +++S + + + A + P + L+ + + Sbjct: 286 -LMLSNLIAKHEGVALAQGYMTKQLLKNPTMKGFYRLMGY--HTDEAEDGRAKA 336 >gi|154491758|ref|ZP_02031384.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC 43184] gi|154087999|gb|EDN87044.1| hypothetical protein PARMER_01374 [Parabacteroides merdae ATCC 43184] Length = 999 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 23/181 (12%) Query: 122 VYLLE---VQIAL---AERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNS 172 LE + A + Y A E + + + P R+ A + + + G Sbjct: 797 TKFLEESVARTAEIEYLSKDYPAALESFKRLQIVAENPENRQAARLGIMRCALQTGQQKD 856 Query: 173 AQRYATKAL---DISPDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-I 227 A A + L +SP+ + Y+ K+ ++A+ L + K+ + + A Sbjct: 857 ALLAADELLKEPKLSPELEAEARYVRAKAYIAQKQANKALADLKELSKDTRTVHGAEAKY 916 Query: 228 LLIARSLENADKGDMIASYHDAIESLK-----LCDNSIMASICAAKSLISQNKKRKAEVI 282 LL + D + + IE+ L I A I Q +A Sbjct: 917 LLAQLYYDTNDDKNAEKVLMNFIENGTPHQYWLARGFI----LLADIYIRQGDDFQARQY 972 Query: 283 L 283 L Sbjct: 973 L 973 >gi|197120109|ref|YP_002140536.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089469|gb|ACH40740.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 1450 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 18/187 (9%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD------- 238 D+PW + + +W + + + A S A+ Sbjct: 877 DSPWYPTLRLFRQKQQGDWEEVVARVKEALARKASPASVSPQAFPAESRAQAEIWNNRGC 936 Query: 239 ----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 +G + + +++ L + + A SL + + +A W + P Sbjct: 937 AEDGEGCHLEAVESYRKAIALSPDFMPAHYNLGNSLFALGRSGEAAESYR--WALALDPA 994 Query: 295 IANIY----THLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + + L ++ V L R + + +E+ + ++ E G +D+A A Sbjct: 995 LPQGWHNLALALKAQGAVDEALHALRRAVRVAPDYLEARHTLGQLHHERGELDEAMASFR 1054 Query: 350 LAMKIAP 356 + P Sbjct: 1055 ENLSRDP 1061 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 6/159 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E L + ++L G ++ A +A+ ++PD Sbjct: 976 GRSGEAAESYRWALALDPALPQGWHNLALALKAQGAVDEALHALRRAVRVAPDYLEARHT 1035 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIES 252 + Q + E A+ + + A+ + + L ++ + ++ Sbjct: 1036 LGQLHHERGELDEAMASFRENLSRDPGYLPSWNAMGISLQVLGLLEE-----AVDCYQKA 1090 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 L L + + A + S +A+ EK+ +++P Sbjct: 1091 LALKPDYLHALNNLGTASRSLGLLAQAKSCYEKVLELDP 1129 >gi|206601977|gb|EDZ38459.1| Probable TPR-domain containing protein [Leptospirillum sp. Group II '5-way CG'] Length = 1076 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 11/254 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 LAE + N A + + +L+I Y L + G + + +A ++P Sbjct: 46 YLAEGKLNEAVIEFQNLLKINPKSAIGHYDLGQAYRKKGWIIESVIQDREATKLAPLMLP 105 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+ + + + +WS A + K + N L + + G + D Sbjct: 106 AHLALAEYAINSGQWSPAKEEIAAILK--IDPNNAEGYALAGQRMLGL--GREKEADQDL 161 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSEN 306 +L + A + Q KA E+ + N P + T L Sbjct: 162 KHALSIEPGFARALVALGDLKRKQGHPAKARSYYEQALQAN--PSLGRALTGLGMLAQSE 219 Query: 307 TVGKLKR--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +L R + + + ++ S ++ + G + +A + + + + + Sbjct: 220 NNAELAREEFQKSLKADPYNLRSRIVYANFLASGGHLHKAISALEVISAKKADVRVPVKI 279 Query: 365 AQIEQANSHNTDKI 378 A+ E N I Sbjct: 280 AEYETLLGANQKAI 293 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 101/349 (28%), Gaps = 58/349 (16%) Query: 96 AAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 A + LA K S L + + Q A +L +L+ P Sbjct: 581 ALGEVLLAEKQRDAANKAFHSALIFNPENPAAILEVSKSEILSGQGQEALTRLSALLKSP 640 Query: 151 -----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ++ L E + GD A++ A + P P ++ + W Sbjct: 641 LAKDRKAEVEWLWGLANE--QSGDPAKAEKALVLATTLDPQNPGYHASLGDFWADRSRWE 698 Query: 206 RAIT-------------FLNQKK-------KNAKEWNRNRAILLIAR------------- 232 A L KK + R R ++ +A Sbjct: 699 DARKEYRKSLSLQSNNPVLEMKKEWLSVQSSRKPDPGRIRKVIALAETYRASHPSDISAT 758 Query: 233 ---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + L ++ A + A L+SQ K KA+ + + Sbjct: 759 MLEAQGELLLKKPEKALPLFDAILSSHPDNTGARLGKAGILLSQGKTEKAKNL--ATMIL 816 Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 HP+ + + + + R +L + + + ++ + + + L++ +A Sbjct: 817 ADHPDNLAANLLMTRIDQKNNDFTDEADRLEKLHQKHPDWIQPSLTLVAVDLKLKRFREA 876 Query: 345 HAKAMLAMKIAPR---KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + A + + P A+++ A+ + L A Sbjct: 877 ESIADSILTVQPDLYNARFLKAQAELDMADYRGALRNLSILAKANKKPA 925 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 14/233 (6%) Query: 102 LARKMHSYV---SQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 LA + ++ + + L + L + A + +L A Sbjct: 485 LANRQSREALLTAKAYLKDHPDNTNVRLFLANLYLRSGKLPQARRTYKTILTTDPKNLPA 544 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 V SL + + A+ +AL +SPD + A+ + + K+ A + Sbjct: 545 VLSLASIAMTQKNYPEAESDFRRALTLSPDNSGLYSALGEVLLAEKQRDAANKAFHSALI 604 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NK 275 E AIL +++S + +G + A+ L + Q Sbjct: 605 FNPE--NPAAILEVSKSEILSGQGQEALTRLSALLKSPLAKDRKAEVEWLWGLANEQSGD 662 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINK 322 KAE L ++P H + + + E+ + +++L L+ N Sbjct: 663 PAKAEKALVLATTLDPQNPGYHASLGDFWADRSRWEDARKEYRKSLSLQSNNP 715 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 97/269 (36%), Gaps = 23/269 (8%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRY 176 ++ + +I L E + A + LE + +P Y L + + + A Sbjct: 340 PPILKIGAARIELFEGKPREASKVLESLANVPD--LPPTYPLTQSQVALALNRPDQAISI 397 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 T AL SP + ++ + K+W A+T +N E L A + Sbjct: 398 LTHALARSPGNIDLQLSLADARMRLKQWKPALTLINTVLSEHPE-------NLPAIQRKG 450 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294 G + + +SL++ + R+A + K + + HP+ Sbjct: 451 FLLGKTSGASVQIGFLKHEASSLPRVEPLYLQSLLANRQSREAL-LTAKAYLKD-HPDNT 508 Query: 295 -----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +AN+Y L S + + + +++ +++ ++ IA+ + +A + Sbjct: 509 NVRLFLANLY--LRSGKLPQARRTYKTILTTDPKNLPAVLSLASIAMTQKNYPEAESDFR 566 Query: 350 LAMKIAPRKE-IFLLLAQIEQANSHNTDK 377 A+ ++P ++ L ++ A Sbjct: 567 RALTLSPDNSGLYSALGEVLLAEKQRDAA 595 >gi|88797081|ref|ZP_01112671.1| TPR repeat protein [Reinekea sp. MED297] gi|88779950|gb|EAR11135.1| TPR repeat protein [Reinekea sp. MED297] Length = 852 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 90/302 (29%), Gaps = 45/302 (14%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYAT 178 L + + + A ++ +A Y ++ GDL +A+ Sbjct: 224 TLELLADTLTRQGKPDEAL-IYSRAIRDANPEAYAARQQYLDALNAASLGDLATARSTFE 282 Query: 179 KALDISPDAPWVT----------------EAVVQ------------------QYVLAKEW 204 L+ P+ EA++ + Sbjct: 283 DILNQFPNNRQAALLLGLLRLEEGNIDEGEALLSQNIEAETAPVNIIRATALAQAEQGKP 342 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 +A+ L + + LL + +G+ A ++L L + Sbjct: 343 KQALAVLEKALLARPD----DPTLLSLYGVIALSQGEEQAGIRSITKALTLSPQQTRLHL 398 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINK 322 A+ ++ A ++ NP P L + ++ L Sbjct: 399 LLAQHYEETDQIDLALGHYRSAFEKNPADWPTTGAYLVLLTNADSTDTSGVMDTLATQYS 458 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDKILYW 381 + V++L +++ G++DQA ++ ++I P + L+ A++ + + YW Sbjct: 459 DQVDALWLMAMTHYRQGNLDQAQSRLNQLLEIDPHRTDALIAKARLLSQEGNARAAVPYW 518 Query: 382 TQ 383 Sbjct: 519 LS 520 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 98/302 (32%), Gaps = 35/302 (11%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSLY 161 + + ++ + L IAL++ + + + + P TR + L Sbjct: 344 QALAVLEKALLARPDDPTLLSLYGVIALSQGEEQAGIRSITKALTLSPQQTRLHLL--LA 401 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNA 218 ++ A + A + +P A W T V+ + + S + L + + Sbjct: 402 QHYEETDQIDLALGHYRSAFEKNP-ADWPTTGAYLVLLTNADSTDTSGVMDTLATQYSDQ 460 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + L ++ + +G++ + + L++ + A I A+ L + R Sbjct: 461 VDA-------LWLMAMTHYRQGNLDQAQSRLNQLLEIDPHRTDALIAKARLLSQEGNARA 513 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV----SKI 334 A + VNP A + + + L + ++ + + ++ Sbjct: 514 AVPYWLSVLNVNPENRTALNELVRIQSRQLSSQELINWLVAQQQSYPQAAIALRSVSVEL 573 Query: 335 ALEMGSIDQAHAKAMLAM-KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 A+ G +DQA A + P + A + + A+ A D Sbjct: 574 AVNEGRLDQAKQIAQPDLHSEDPYAR--RIRANLLRGE-------------AIVAANDLQ 618 Query: 394 WI 395 W Sbjct: 619 WT 620 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 4/114 (3%) Query: 110 VSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + N+ +++ +L +++A E L A+ +L + R Sbjct: 723 AAANLLLDNQPNSVSAHMVLASHSLNNGDHDVAVNHYETALTFSPELVPALNNLAWLK-R 781 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 D A A KA +++P++ V + L E +AI+ L++ + Sbjct: 782 DADPERALSLAKKAANLAPESASVLDTYGWLLHLNGESEQAISVLDRALALEPD 835 >gi|118100678|ref|XP_417426.2| PREDICTED: similar to PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Gallus gallus] Length = 941 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 103/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 696 Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + + + + + LK C +SI + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPHSIPLWLLLSRLEEKV 756 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIV 331 + +A ILEK N P+ A+++ + LK + + +E S ++ Sbjct: 757 GQLTRARAILEKSRLKN--PKNADLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|325578220|ref|ZP_08148355.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus parainfluenzae ATCC 33392] gi|325159956|gb|EGC72085.1| lipopolysaccharide N-acetylglucosaminyltransferase [Haemophilus parainfluenzae ATCC 33392] Length = 392 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 60/200 (30%), Gaps = 44/200 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151 + A ++H + + + E LL Q + Y+ A +M+ P Sbjct: 91 GEVDRALRIHQALDRSPNYSFEQ--KLLAKQ--QLAKDFMAVGFYDRAEALYIIMVDEPE 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 E A+ L + + A A K ISP Sbjct: 147 FAENALQQLLVIYQKTKEWKKAVNIAEKLAKISPK------------------------- 181 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 E + A SL + ++ ++L + S+ AS+ A + Sbjct: 182 --------ENDVELAQCYCEYSLSGELES-VVEKRSILQKALNVSPTSVRASMLLADLEM 232 Query: 272 SQNKKRKAEVILEKIWKVNP 291 + R+A LE I NP Sbjct: 233 ADKNYRQAIHFLENILNQNP 252 >gi|30248607|ref|NP_840677.1| putative protein porphyrin biosynthesis [Nitrosomonas europaea ATCC 19718] gi|30180202|emb|CAD84504.1| putative protein porphyrin biosynthesis [Nitrosomonas europaea ATCC 19718] Length = 389 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 60/370 (16%), Positives = 120/370 (32%), Gaps = 32/370 (8%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 V T + + LFA+IL +A+ R + K Sbjct: 24 NTGSVLFTVPPYKVELAFNTF---VLILLFAFILFYALLRALSGLSGL--------RSRK 72 Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 + +GL + + + + + + +L +A + Sbjct: 73 VEQLTRSGLKAFF---ETRYDRAVALAEKAARLADRQTIKVLNAVVAARSAHQQRNYALR 129 Query: 144 EMMLQIPATREFAVYSLYFESC--------RIGDLNSAQRYATKALDISPDAPWVTEAVV 195 + +L + + A +L + R GD +A + +L + ++ Sbjct: 130 DRLLAVAREQAPAGRALALIAEAELLLDEGRHGDALAALQ----SLYSTGGLQSTAVLLL 185 Query: 196 QQYVL--AKEWSRAITFLNQKKKNAKEWNRNRAILLIARS-LENADK-GDMIASYHDAIE 251 + A W + L + N +R L R+ LEN K IAS Sbjct: 186 ELKARQMAGNWDAVLE-LTKVLVNRPAVDRTLIDELRFRAHLENIRKNAKDIASLRKYWG 244 Query: 252 SLKLCDNS-IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 SL + ++ AA++LI A+ I+E P+PE+ +Y S + Sbjct: 245 SLSYREKLDGRLAVAAARALIFLGDNATAQKIIENGLDAQPYPELVTLYADCKSGVVSWQ 304 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 ++RA + L+ + ++ +A + ++ I P + L LAQ+ + Sbjct: 305 IQRAESWLAKYPNNAGLLLTLGRLCTYGELWGKAQSYLEASLSIEPGYPVHLALAQLFEK 364 Query: 371 NSHNTDKILY 380 + Sbjct: 365 LGKQEAASEH 374 >gi|307131408|ref|YP_003883424.1| hypothetical protein Dda3937_04037 [Dickeya dadantii 3937] gi|306528937|gb|ADM98867.1| conserved protein [Dickeya dadantii 3937] Length = 389 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 95/290 (32%), Gaps = 54/290 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H +++ + E LL VQ + Y+ A E + ++ R Sbjct: 83 GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMVAGLYDRAEEIFKQLVDEEDFR 140 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ + ++Q + +W AI + Sbjct: 141 VSAL----------------------------------QQLLQIHQSTSDWPNAIDTAEK 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K R+ A +SL+ D+ + ++ + SI + ++ Sbjct: 167 LVKLGKTQLRSEIAHFYCEQSLQAMGSDDLDKAMTMLKKASAADNQCARVSIMLGRIYMA 226 Query: 273 QNKKRKAEVILEKIWK------VNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESV 325 Q +A +LE++ + P + Y HL EN L+R E S Sbjct: 227 QQNYAQAVAVLEQVLQQDMELVSETLPMLQECYRHLQQPENWAAFLRRC---VEEKSGST 283 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373 + ++++ + + S + A ++ P +F L + +A Sbjct: 284 -ADLMMADVLEQYESTESAQTYVTRQLQRYPTMRVFHRLIDYHLREAEDG 332 >gi|196233636|ref|ZP_03132477.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196222306|gb|EDY16835.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 752 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 80/230 (34%), Gaps = 13/230 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A +L + A++ L + R G A +AL+ +P Sbjct: 19 AGRLPEAEALYRQILNAQPGQPDALHLLGVVAHRSGRPEIAVELIQQALNAAPQHVAAHF 78 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + A + + ++ + L A + +G + + Sbjct: 79 NLGNALSELGRMEEAADAFGRATELQPDYAQAHHNLGSALAK----RGRFDEAIAAFQRA 134 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSEN 306 ++L + A +L +Q ++ +A ++ + P H + NI+ + Sbjct: 135 IELKPDYASAYNNLGLALKAQARRDEALAAFQQAIALQPDHAEAHFNLGNIFREWARPQE 194 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +RA EIN + ++L + + G +D+A A A++I P Sbjct: 195 AMTAFRRA---LEINPDYADALNNLGITLADAGRLDEAIACYRRALQINP 241 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 88/246 (35%), Gaps = 12/246 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++LL V +A + IA E ++ L A ++L +G + A Sbjct: 38 GQPDALHLLGV-VAHRSGRPEIAVELIQQALNAAPQHVAAHFNLGNALSELGRMEEAADA 96 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +A ++ PD + + AI + + ++ A + +L+ Sbjct: 97 FGRATELQPDYAQAHHNLGSALAKRGRFDEAIAAFQRAIELKPDYAS--AYNNLGLALKA 154 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D + +++ L + A + ++A + ++N P+ A Sbjct: 155 QARRD--EALAAFQQAIALQPDHAEAHFNLGNIFREWARPQEAMTAFRRALEIN--PDYA 210 Query: 297 NIYTHL-LSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +L ++ G+L A R +IN E+ + E+ +D+A A Sbjct: 211 DALNNLGITLADAGRLDEAIACYRRALQINPAGAETNTNLGNALFELQRLDEAAAAFRAV 270 Query: 352 MKIAPR 357 +++ P Sbjct: 271 IELKPD 276 >gi|196046645|ref|ZP_03113869.1| TPR domain protein [Bacillus cereus 03BB108] gi|218902730|ref|YP_002450564.1| TPR domain protein [Bacillus cereus AH820] gi|225863482|ref|YP_002748860.1| TPR domain protein [Bacillus cereus 03BB102] gi|196022578|gb|EDX61261.1| TPR domain protein [Bacillus cereus 03BB108] gi|218538116|gb|ACK90514.1| TPR domain protein [Bacillus cereus AH820] gi|225789815|gb|ACO30032.1| tetratricopeptide repeat protein [Bacillus cereus 03BB102] Length = 420 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|58583709|ref|YP_202725.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625517|ref|YP_452889.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58428303|gb|AAW77340.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369457|dbj|BAE70615.1| porphyrin biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 421 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 113/361 (31%), Gaps = 31/361 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G YR + L +L + LL+ Sbjct: 7 VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYF----ESCRIGDLNS 172 L V++A A A + + + T L E+ D + Sbjct: 120 ALAS--AVRVADARGDEAAATALAQQLAERDPTAYALLQGERHLARQRPVEAINALDSAN 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ + L + T A+ Q + + + Q ++ A L Sbjct: 178 AQPLPARGLLLR------THALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLAEQT 231 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP 291 L+ +D + + ++L+ C + A + AA E L+ W + Sbjct: 232 LLQASDANALAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDES- 290 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +Y L E + A R +S L+ ++++A QA A Sbjct: 291 ---LVRLYGVLPLEKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347 Query: 352 M 352 + Sbjct: 348 I 348 >gi|163939435|ref|YP_001644319.1| TPR repeat-containing protein [Bacillus weihenstephanensis KBAB4] gi|163861632|gb|ABY42691.1| Tetratricopeptide TPR_2 repeat protein [Bacillus weihenstephanensis KBAB4] Length = 420 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 294 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340 +K L + LK A L+E K E L+ V + A++ G Sbjct: 295 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 339 Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 340 QLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|283853011|ref|ZP_06370269.1| response regulator receiver protein [Desulfovibrio sp. FW1012B] gi|283571621|gb|EFC19623.1| response regulator receiver protein [Desulfovibrio sp. FW1012B] Length = 455 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 92/288 (31%), Gaps = 22/288 (7%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +A+ ++ A ++ + +LL +AL + + A + + Sbjct: 170 VASGDLEQAERVT--AKAFEIKPDSLKCHLLMGDVALKKGDHPAAEKHYLAAARAEKLYI 227 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + L G+L+ Y T+ +SP + + Y+ + +A F + Sbjct: 228 EPLKKLVDLCRESGELDKRLAYMTRLDTLSPLNFERKVDIGEAYLAKGDNEKAKVFFEEA 287 Query: 215 KKNAKEWNRNRAILLIARSLENADK---GDMIASYHDAIESLKLCDNSIMASIC-----A 266 ++ R + ++ +E A K D + E+++ +S+ S Sbjct: 288 RR---VVTRVASDMVSESLMEIARKIGDKDQDMALRFVTEAIEAKGDSLGISDLWMFNNR 344 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKL--KRALRLE 318 L Q +A K ++P + + Y +T + K Sbjct: 345 GILLRRQGLWAEAVENYRKALTISP-RDGGLLYNLGVAYADGKQYDTAVRYFEKALEADP 403 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + K++ ++ + +A A+ + P E + + Sbjct: 404 SLVKQAPSVGYNIATAHHRCRDLPEARRFLQAALDLDPGYEAARRMLE 451 >gi|242239140|ref|YP_002987321.1| tetratricopeptide repeat protein [Dickeya dadantii Ech703] gi|242131197|gb|ACS85499.1| Tetratricopeptide domain protein [Dickeya dadantii Ech703] Length = 389 Score = 52.6 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 91/298 (30%), Gaps = 53/298 (17%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H +++ + E LL VQ + Y+ A + ++ R Sbjct: 83 GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMTAGLYDRAEGIFKQLVDEDEFR 140 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + ++Q + +W AI + Sbjct: 141 -VG---------------------------------ALQQLLQIHQSTSDWPNAIDTAEK 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A ++L+ DM + ++ + SI + L++ Sbjct: 167 LVKLGKDQLRAEIAHFYCEQALQAMGSDDMDKAMGLLKKAAAADEQCARVSIMVGRILMA 226 Query: 273 QNKKRKAEVILE------KIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKESV 325 Q + +A +LE K + P + Y +L E + L+R E S Sbjct: 227 QQQYERAVGVLEQVLEQDKEFVSETLPMLRECYQYLQQPEGWIAFLRRC---VEEKSGST 283 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 + ++++ ++ S + A ++ P +F L + Sbjct: 284 -ADLMMADTLEQLDSAEAAQMYVTRQLQRHPTMRVFHRLIDY-HLRDAEDGRAKESLA 339 >gi|332163410|ref|YP_004299987.1| cellulose synthase subunit BcsC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667640|gb|ADZ44284.1| cellulose synthase subunit BcsC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 1168 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138 GL A + A ++ + + L+ LL E AL + Sbjct: 314 GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTAL 373 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + QI + +A+ L + D +A+++ +AL + P + Y Sbjct: 374 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 433 Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A+ +LN Q+ K N + +L ++ A + + ++ Sbjct: 434 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAETLAAQQQWHQAAEKYRQAQ 492 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 K+ N + + A++L +A+ Sbjct: 493 KMAPNDVWITYRLAQALAQDGHLAQADA 520 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 60/160 (37%), Gaps = 17/160 (10%) Query: 144 EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + ML P R + G +A +AL SP+ P + A+ Y A Sbjct: 266 QAMLADPTYQARLSGL-----AKVDSGSGVAAIPALKQALAASPNDPEILGALGLAYARA 320 Query: 202 KEWSRAITFLNQKKKNAKEW----------NRNRAILLIARSLENADKGDMIASYHDAIE 251 + ++A+ Q +K+ K+ NR LL + G+ + + Sbjct: 321 GDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTALAQQKYQQ 380 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++ + A I ++++ + AE ++ +++P Sbjct: 381 ARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDP 420 >gi|255562045|ref|XP_002522031.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] gi|223538835|gb|EEF40435.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] Length = 979 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 88/258 (34%), Gaps = 23/258 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A N A + + V ++ + L LL + E + P R Sbjct: 68 AGNYKQALEHSNTVYERSPLRTDNL-LLLGAIYYQLHDYDMCIEKNEEALRLEP--RFAE 124 Query: 157 VYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y + GD++ A RY A+++ P+ + Y+ + A Q Sbjct: 125 CYGNMANAWKEKGDIDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLNEAAQCCRQAL 184 Query: 216 KNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + N L+ A+ L + +Y +E+L++ +A A + Sbjct: 185 ALNPLLVDAHSNLGNLMKAQGL-------VQEAYSCYLEALRIQPTFAIAWSNLAGLFLE 237 Query: 273 QNKKRKAEVILEKIWKVNPH-PE----IANIYTHL-LSENTVGKLKRALRLEEINKESVE 326 +A ++ K+ P P+ + N+Y L + + + +RA + Sbjct: 238 SGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVCYQRA---VQTRPNYAV 294 Query: 327 SLVIVSKIALEMGSIDQA 344 + ++ E G +D A Sbjct: 295 AFGNLASTYYERGQLDLA 312 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 70/220 (31%), Gaps = 17/220 (7%) Query: 98 HNIPLARKMHSYVSQQHTF---HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A + + + L L++ Q A+ L+I T Sbjct: 171 GRLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQ-----GLVQEAYSCYLEALRIQPTFA 225 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A +L GDLN A +Y +A+ + P P + Y AI + Sbjct: 226 IAWSNLAGLFLESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYRALGMPQEAIVCYQRA 285 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + A+ + ++G + + H +++ + A +L Sbjct: 286 VQTRPNY----AVAFGNLASTYYERGQLDLAIHHYKQAIACDGRFLEAYNNLGNALKDVG 341 Query: 275 KKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVG 309 + +A + + P HP+ + NIY +T Sbjct: 342 RVEEAIQCYNQCLALQPSHPQALTNLGNIYMEWNMASTAA 381 >gi|253700213|ref|YP_003021402.1| hypothetical protein GM21_1589 [Geobacter sp. M21] gi|251775063|gb|ACT17644.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21] Length = 572 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 62/170 (36%), Gaps = 11/170 (6%) Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ + + A+ L Q + A L A + + + ++ + Sbjct: 52 ALARLRAGEGDQDAALALLRQAMASDPGA----AYLHTAAAQYLLQQHKPEEALAESQAA 107 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-----LLSENT 307 +K+ + A + + L++ ++++A +K+ +++P E +Y H L S Sbjct: 108 IKIDPTFLQAQLLSGNILMTMQREKEAIPYYKKVMELDPTKE--EVYLHVAIYYLKSFEY 165 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L + +S ++K +M +A A+ + P Sbjct: 166 EQAVDTLKGLVKAAPDSALGYYYLAKTYEQMRLPREALGYYKKALDLKPD 215 >gi|331649352|ref|ZP_08350438.1| cellulose synthase operon protein C [Escherichia coli M605] gi|330909587|gb|EGH38101.1| cellulose synthase operon protein C [Escherichia coli AA86] gi|331041850|gb|EGI13994.1| cellulose synthase operon protein C [Escherichia coli M605] Length = 1157 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 90/269 (33%), Gaps = 15/269 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVIGLGDVAMARKDYPAAERYYQQTLRMDS 416 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ I L+ ++ + + + L ++ ++G Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ KA+ ++ + + P+ PE Y Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSKADTLMRNLAQQKPNDPEQVYAYG 536 Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351 LS + + L L + N E + + V + A + + + Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQVLETANRLRENGKEAEAEAML 596 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + P I L LA Q + Sbjct: 597 RQQPPSSRIDLTLADWAQ-QRRDYTAARA 624 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVIGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSKADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPMQALETYKDAM 738 >gi|154150715|ref|YP_001404333.1| TPR repeat-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8] Length = 4079 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 34/278 (12%) Query: 99 NIPLARKMHSYVSQQHTFH----NEYL---VYLLEVQIALAERQYNIAHE----KLEMML 147 + ++ + H F E + + + A +++ A E + Sbjct: 2936 DGRAWARLGQFEDAIHLFDIALGKEPGNGEILFEKAKALAALGRHDEAQEIFRLAFTQLT 2995 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + L + A AL +SPD P + E + A + A Sbjct: 2996 DNYEPAY--LRGLSLLALER--YEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGA 3051 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + + A L R+L ++ D + D + L L +AS Sbjct: 3052 VAAFDHAISLLPDDPG--AYLERGRALAALNRNDEAVASFD--QVLALEPADPVASFERG 3107 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK----LKRALRLEEINK 322 ++L K A L+ +P HP +Y S + + + RL Sbjct: 3108 RALYYAAKYEHAVEALDTTLSSDPRHP--GALYFRAASLAALERYAEAAESFERLLVYTP 3165 Query: 323 ES----VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E+ E +++++ D+A A + + P Sbjct: 3166 ENADAWYEQGCVLARL----RHYDEAIAAFDHVLNLVP 3199 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 14/203 (6%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 R G+ +A K L I P++ + ++ ++ AI N+ Sbjct: 3654 LIHLERTGEALAAI---EKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALA---- 3706 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 NR A + A KG + +L++ + A ++L + ++A Sbjct: 3707 INRQFAEAHYYKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEAL 3766 Query: 281 VILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++ NP A Y L + + + R E+N ++ ++ Sbjct: 3767 AAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIR--SFDRALEVNPSCFQAHYWKARTL 3824 Query: 336 LEMGSIDQAHAKAMLAMKIAPRK 358 + GS D A + A+ I P + Sbjct: 3825 YDEGSYDAAITEYDRAIAIKPDR 3847 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 84/277 (30%), Gaps = 39/277 (14%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGD 169 + + L+ A+ Y + + P + E A+ +G Sbjct: 1459 AALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLH-NLGQ 1517 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A A KA++I PD + ++ L+ A + R Sbjct: 1518 DEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVEALDHAL--AGDPKNARVNYQ 1575 Query: 230 IARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R+ + + + I++Y A+++ + I A + ++L+ ++ R A Sbjct: 1576 KGRAFDGLGQYENAISAYDAALQAQ---PDCIPARMHKGEALLFISRFRDAT-------- 1624 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 K ++ + ++ E+ + +++ +G + Sbjct: 1625 -----------------------KEFGKILTEHPDNAEAWIKMARARFSLGDYTEVIEAC 1661 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 A++ LL + Q ++ + A Sbjct: 1662 DHALRFNADSAEALLYRGLAQYELGRYEEAVESLARA 1698 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A ++ A + + A Y +G A R L P Sbjct: 3514 KGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHP 3573 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 A + + AIT ++ ++ A L + N ++ + + Sbjct: 3574 SCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYP--EAWLYRGIAEANLEEFE--EA 3629 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 +L ++ A + ++LI + +A +EK+ + PE A+ + Sbjct: 3630 LDCYNHALAQNESYATALLNKGRALIHLERTGEALAAIEKVLTIQ--PESADAFYYKGRA 3687 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 HL + R IN++ E+ G ++A A A++I Sbjct: 3688 HLNRRQDDDAIDAFNRALAINRQFAEAHYYKGTALARKGQYEEAVAAFDAALRI 3741 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 19/255 (7%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAV-YSLYFES 164 ++ ++ + R Y +A + L + P + + Sbjct: 2271 SAFDRALTLGPETAVIQYYRGRALAEMRDYGVALDALNRAIGLDPENSFTWLAKGSVLLA 2330 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G +A +AL + P A + + L AI + + Sbjct: 2331 QKDG--AAAVAAFDQALVLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEG 2388 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L + + +++ A +L + K KA Sbjct: 2389 S----FKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFT 2444 Query: 285 KIWKVNP-------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + +P H +A Y L + L +L E ++ E+L ++ + Sbjct: 2445 HALEHDPSLSDALFHTGLA--YAALSRYSPA--LSAFDKLLESGPQNAEALFQKGRMLAK 2500 Query: 338 MGSIDQAHAKAMLAM 352 +G D+A A ++ Sbjct: 2501 LGRPDEALAVLETSL 2515 Score = 36.8 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 18/222 (8%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R G + A ++A+ P + + E +A+T + + + Sbjct: 2806 RAGKNDEAVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRAL--DLDTSFGD 2863 Query: 226 AILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + +LE K D I +Y + + + A + + A E Sbjct: 2864 AAYYLGLALERVGKFTDAITAYDRMVAAR---PDHSDAWYHRGIASERLGRDNDAVQAYE 2920 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS 340 K ++ PH + ++ + +G+ + A+ L +I + E L +K +G Sbjct: 2921 KARQIEPH-NLPLLFADGRAWARLGQFEDAIHLFDIALGKEPGNGEILFEKAKALAALGR 2979 Query: 341 IDQAHAKAMLAMK------IAPRKEIFLLLAQIEQANSHNTD 376 D+A LA LLA +E+ + Sbjct: 2980 HDEAQEIFRLAFTQLTDNYEPAYLRGLSLLA-LERYEDADMA 3020 >gi|91789511|ref|YP_550463.1| putative porphyrin biosynthesis-like protein [Polaromonas sp. JS666] gi|91698736|gb|ABE45565.1| putative porphyrin biosynthesis related protein [Polaromonas sp. JS666] Length = 429 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 53/398 (13%), Positives = 105/398 (26%), Gaps = 54/398 (13%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + + + V+I W S +++ +L F Sbjct: 1 MRAALWLVALFGVAVAVALFAGNNQAVVTIFWPPHRLDVSFNLMVLVLAGFFMLLYGALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + P ++ Y +L L ++ A A K E Sbjct: 61 AVSALFALPLEARRWRAQQKERAMYGSLMDSLANLLAGRYIRAAKSAQNA-----LVQEK 115 Query: 121 LVYLLEVQIALAERQ---YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 + LL Q A + L +L + + +L + ++ N+AQR+A Sbjct: 116 SLGLLTDQTGHATGHSASRSTQLRSLAHLLVAESAQSLQNRALRDQHLQLALQNAAQRHA 175 Query: 178 TKALD--ISPDAPWV-----TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + + A W A ++ + A L + K + +L + Sbjct: 176 QEVREGVQLRAARWALEDRDAGAALEWLTQLPQ-GAARRTLALRMKLRATRQVKQTLLAL 234 Query: 231 ----------------------ARSLENADKGDMIASYHDA----IESLKLCDNSIMASI 264 +LE + A A ES + ++ + Sbjct: 235 DTARLLAKHRAFSQAAAQSIVRGLALELLNDAHDPAQLQQAWFSLDESERAMPELVVHA- 293 Query: 265 CAAKSLISQNKKRKAEVILEKIWKV--NPHPEIANIYT--------HLLSENTVGKLKRA 314 A++ + A L ++W P EI + L L R Sbjct: 294 -ASRLMALHGDAGLARTWLLQVWDRMMEPRSEIGDNLRIKLITGLEAGLDSLDAAWLARI 352 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + L +A A Sbjct: 353 EAAQLSRPRDANLQYLAGMACLNRQLWGKARQLLSQAA 390 >gi|74007678|ref|XP_858808.1| PREDICTED: similar to O-linked GlcNAc transferase isoform 1 isoform 8 [Canis familiaris] Length = 1048 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 52/308 (16%), Positives = 109/308 (35%), Gaps = 28/308 (9%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 + H H GY L L++ A ++ A + + Q L Sbjct: 96 EAIEHYRHALRLKPDFIDGYINLAAALVA--AGDMEGAVQAYVSALQYNPDLYCVRSDLG 153 Query: 123 YLLEVQIALAERQ--YNIAHEKLEMM---LQIPATR---EFAVYSLYFESCRIGDLNSAQ 174 LL+ L E + Y A + M L+ T+ A +L G++ A Sbjct: 154 NLLKALGRLEEAKPPYATALHMMRNMACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAI 213 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + KA+ + P+ + A+ + RA+ + + N A++ + Sbjct: 214 HHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NHAVVHGNLAC 269 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP 293 ++G + + +++L + A A +L + +AE ++ P H Sbjct: 270 VYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA 329 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAM 349 + N ++ E G ++ A+RL E + ++ + + G + +A Sbjct: 330 DSLNNLANIKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYK 387 Query: 350 LAMKIAPR 357 A++I+P Sbjct: 388 EAIRISPT 395 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P P + Sbjct: 244 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLAN 303 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + A L + ++G++ + ++L++ Sbjct: 304 ALKEKGSVAEAEDCYNTALRLCPT----HADSLNNLANIKREQGNIEEAVRLYRKALEVF 359 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K ++A + ++ +++P A+ Y+++ + ++ G L Sbjct: 360 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FADAYSNMGNTLKEMQDVQGAL 417 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A A+K+ P Sbjct: 418 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 463 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 82/265 (30%), Gaps = 53/265 (20%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNR 223 G L A + AL + PD + V A + A+ + + + Sbjct: 89 KERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCV 148 Query: 224 NRAILLIARSLENADKGDMIASYHD--------AIESLKLCDNSIMA------------- 262 + + ++L ++ + +++++ N +A Sbjct: 149 RSDLGNLLKALGRLEEAKPPYATALHMMRNMACYLKAIETQPNFAVAWSNLGCVFNAQGE 208 Query: 263 ----------SICA----AKSLISQNKKRKAEVILEKIWKV-------NP-----HPEIA 296 ++ + I+ K I ++ +P H +A Sbjct: 209 IWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLA 268 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 +Y L + + +RA+ L ++ ++ E GS+ +A A+++ Sbjct: 269 CVYYEQGLIDLAIDTYRRAIEL---QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 325 Query: 356 PR-KEIFLLLAQIEQANSHNTDKIL 379 P + LA I++ + + + Sbjct: 326 PTHADSLNNLANIKREQGNIEEAVR 350 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 302 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 361 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 362 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 417 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 418 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 475 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 476 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 511 >gi|218961725|ref|YP_001741500.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730382|emb|CAO81294.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 552 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 63/174 (36%), Gaps = 13/174 (7%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + W T K + N+ + +L N G+ + + + +L L + Sbjct: 151 AREQRWKTLETTFIAKLDDVVSNEVNKIYNI---ALNNYANGNYAEAEKNLVFALGLNPD 207 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSEN--TVGKLKRAL 315 A Q K +A LE + NP H + I + + T +L Sbjct: 208 LKDAYYYLGSVYYKQGKLEQAIQNLELNLEKNPQHTQTLAILIDIYEKTNQTNKRLNAME 267 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP------RKEIFLL 363 +L IN E+ E + ++ + E +I +A A+++ P + FLL Sbjct: 268 KLATIN-ENEELWLTIANLYSEQNNIAKAEEALQKALELNPNYIEAKTRLAFLL 320 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 82/224 (36%), Gaps = 38/224 (16%) Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A K AL ++PD + Y + +AI L + + + AIL+ Sbjct: 194 AEKNLVFALGLNPDLKDAYYYLGSVYYKQGKLEQAIQNLELNLEKNPQHTQTLAILI--- 250 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + +K + +A+E L + + + A QN KAE L+K ++NP+ Sbjct: 251 --DIYEKTNQTNKRLNAMEKLATINENEELWLTIANLYSEQNNIAKAEEALQKALELNPN 308 Query: 293 PEIANIYTHLLSENTVGKLK-------RALR----LEEINKESVESLVIVSKIALE---M 338 Y +L R LE I + E+ ++ +++A Sbjct: 309 ------YIE-----AKTRLAFLLYDHNRFEEAIPYLEAIFDKYPENELVSTRLANAYQKA 357 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLA----QIEQANSHNTDKI 378 +D A AK +K P+ + L A +++ + + + Sbjct: 358 NRLDDAIAKYENTIKNNPQNTMAYLSAVNLYRLKATQTSDPAAV 401 >gi|238793251|ref|ZP_04636878.1| Cellulose synthase protein C [Yersinia intermedia ATCC 29909] gi|238727419|gb|EEQ18946.1| Cellulose synthase protein C [Yersinia intermedia ATCC 29909] Length = 1146 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 78/208 (37%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLL----------EVQIALAERQYNI 138 GL + + A ++ + + ++ + L+ E AL + Sbjct: 300 GLAYARSGDRAQALRLFEQAQKSDKDGLKSDKWISLIKTNRYWLLNDEGDKALKAGNTGV 359 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + I + +A+ L + D +A++Y +AL + P + Y Sbjct: 360 AQQKYQQARHIDGSDSYALIGLADVAVARHDDKTAEQYYQQALRLDPSNDSAVRGLSNIY 419 Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A+++LN Q+ K + + +L ++ A + + ++L Sbjct: 420 QRESP-QKALSYLNSLPRSQQAKMRDTLDSLQIDMLKQQAENLAAQQQWRQAAEKYRQAL 478 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 K+ + + + A++L ++ +A+ Sbjct: 479 KMAPDDVWITYRLAQALAQEDHLAEADA 506 >gi|145589279|ref|YP_001155876.1| sulfotransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047685|gb|ABP34312.1| sulfotransferase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1764 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 11/199 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D NSA + + + I+PD + V AI L + + + Sbjct: 1217 ARAEKDKNSAIEWYQRVISIAPDYLESLSNLGAVLVELDRADEAIPILQKALSLNESYP- 1275 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + + D+ D+ + L+L A+ Q++ +AE +L Sbjct: 1276 -EALCNLGLARLKRDEIDI--AGRLLERCLQLRPGYPEGLTGLARIFNEQDRLPEAEQLL 1332 Query: 284 EKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 K P ++A IYT L + L + L I +S ++ + ++LE Sbjct: 1333 LTALKNAPDKVDARCQLAAIYTELGKASAAEALYQ-EALV-IEPDSADAFTGLGNLSLEA 1390 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G+I+ A A+++ P Sbjct: 1391 GNIELAEEYLNNAIQLQPD 1409 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 23/168 (13%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENA--------DKGDMIASYHDAIESLKLCDNS 259 I F + K+ + RA+ L L++ + D ++ + + + Sbjct: 1181 IAFYDNKEFVKAKSCHERALALAPNMLQSLNNMGSIARAEKDKNSAIEWYQRVISIAPDY 1240 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR------ 313 + + L+ ++ +A IL+K +N Y L + +LKR Sbjct: 1241 LESLSNLGAVLVELDRADEAIPILQKALSLN------ESYPEALCNLGLARLKRDEIDIA 1294 Query: 314 ---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 R ++ E L +++I E + +A + A+K AP K Sbjct: 1295 GRLLERCLQLRPGYPEGLTGLARIFNEQDRLPEAEQLLLTALKNAPDK 1342 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 29/93 (31%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + Y A + L++ + +L + G+ + A KA +++P Sbjct: 155 AYTDAKDYTKAVAAYKKALKLNPKHGLSWNNLGSALEQSGNKDEALEAYIKAAELNPQHS 214 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + Y +A T K++ Sbjct: 215 EAQNNLGAIYSEQGLLEKARTGFEAAIDAKKDF 247 >gi|256810144|ref|YP_003127513.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86] gi|256793344|gb|ACV24013.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86] Length = 312 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 83/236 (35%), Gaps = 13/236 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES----CRIGDLNSAQRYATKALDISP 185 AL Y + ++ ML + + LY E ++G A + KAL+++P Sbjct: 15 ALENHDYERSLNLMDEMLNVEGLSSKEISELYAEKGKLLRKMGKNEEALKAYDKALELNP 74 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + A + E N + + + G + Sbjct: 75 NYILAYLYKGILLIHLGRLEEAERVFLK----LHELNPSDLVCKYIIAYVLKRLGKYSEA 130 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----TH 301 + ++ + +A + K L + K +KA EK ++NP + +Y Sbjct: 131 QKIFDDVVERHPQAFIAWLMKGKLLHREGKLKKALECFEKALEINPK-DYELLYHKGEIL 189 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L L+ L E N + SL+ + +I + +G I +A A+K+ P Sbjct: 190 LKLGKYCEALECFKVLHEKNDRDISSLMHIIEILVLLGRISEAREYVEKALKLNPD 245 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 77/211 (36%), Gaps = 13/211 (6%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV-YLLEVQIALAERQYNIAHEKLEMM 146 LY G++ I + A ++ + H + LV + + +Y+ A + + + Sbjct: 81 LYKGILLIHLGRLEEAERVF---LKLHELNPSDLVCKYIIAYVLKRLGKYSEAQKIFDDV 137 Query: 147 LQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 ++ A L R G L A KAL+I+P + + + ++ Sbjct: 138 VERHPQAFIAW--LMKGKLLHREGKLKKALECFEKALEINPKDYELLYHKGEILLKLGKY 195 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A+ K + K +++ I L G + + ++LKL + M Sbjct: 196 CEALECF--KVLHEKNDRDISSLMHIIEILVLL--GRISEAREYVEKALKLNPDDPMIYF 251 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-PE 294 L + +A +K ++NP+ P+ Sbjct: 252 FYGIILNKLGRYEEAIKYFDKALELNPNFPD 282 >gi|134096050|ref|YP_001101125.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans] gi|133739953|emb|CAL63004.1| Conserved hypothetical protein; putative exported protein; putative TPR repeat domain [Herminiimonas arsenicoxydans] Length = 602 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 103/267 (38%), Gaps = 11/267 (4%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--EFAVYS--LYFESCRIGDLNSAQRY 176 L LL ++A + +A + M++ TR A + + + G+ SA R Sbjct: 75 LFKLLRAELAYQRGDWQLA--YVTMLVSAQETRDPRLARRAAEIALSVKQTGEALSAVRL 132 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + ++P + + + VL + + A ++ + + + R +L++ Sbjct: 133 WRE---LAPHSDEANQFYLGLVVLGENLAEAKPIFTERLQEVRP--QARGLLILQIQRLL 187 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D A++ E N + I ++ ++N ++ + +K ++ P EIA Sbjct: 188 VRTKDKNAAFTLLEELTAPYQNLVETHIALSQGAFAKNDLARSRMESKKALEIKPDLEIA 247 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + N+V L+ + N +S + + +K ++ ++QA + + +K P Sbjct: 248 VLMLAQATPNSVDALRTLTAFLDKNPKSRDVRIAYAKTLIDDKQLEQARKQFEILLKDQP 307 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQ 383 L I A ++ + + Sbjct: 308 DDLTILYATGILAAQMNDREGAEKYLT 334 >gi|225872746|ref|YP_002754203.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] gi|225794526|gb|ACO34616.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] Length = 708 Score = 52.6 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 88/254 (34%), Gaps = 26/254 (10%) Query: 137 NIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + + + + + P ++ + LYF++ RI D A A + + +PD + + Sbjct: 85 KASQQYHQALAEDPDSKYLKSHLAELYFQTGRIKDAIVA---AQEEVKSNPDDLEAHKLL 141 Query: 195 VQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAIL------LIARSLENADKGDMI 243 Q Y+ ++ A LN E+ + A+ I A M Sbjct: 142 AQIYLQSISNDQQDNQMAQQMLNLAI---GEYQKITALEPGKIPDHIMLGRLYAANHQMD 198 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIY 299 + + ++ ++ +S + A+ Q KA L+ + + P + Y Sbjct: 199 KAEAEFQKAYQIDPSSEETILSVARFYSEQGDNAKAIATLKSVTAADQTPRIEYALGLSY 258 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + R +++ ++ E ++K DQA + P Sbjct: 259 DQLK--EPTKAIAAYQRALQLDPDNPEIEKPLAKDLFAAHQFDQALQVYQDLVSSEPNNG 316 Query: 360 -IFLLLAQIEQANS 372 +L ++ IE+ + Sbjct: 317 KAYLRISDIERHDG 330 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 12/180 (6%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A+ KA I P + +V + Y + ++AI L + A+ L Sbjct: 198 DKAEAEFQKAYQIDPSSEETILSVARFYSEQGDNAKAIATLKSVTAADQTPRIEYALGLS 257 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 L+ + IA+Y A++ L ++ AK L + ++ +A + + + Sbjct: 258 YDQLK--EPTKAIAAYQRALQ---LDPDNPEIEKPLAKDLFAAHQFDQALQVYQDLVSSE 312 Query: 291 PHPEIANIYTHLLSENTVG-KLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P Y + + ++A ++ + I +SVE +A +G ++A Sbjct: 313 --PNNGKAYLRISDIERHDGRFQQAYDNLMKAKAITPDSVEIAYDQGLLADALGHFEEAE 370 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 97/284 (34%), Gaps = 36/284 (12%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + + A L+ + T Y+L ++ + A +AL Sbjct: 217 TILSVARFYSEQGDNAKAIATLKSVTAADQTPRI-EYALGLSYDQLKEPTKAIAAYQRAL 275 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + PD P + + + + A ++ +A+ + E N +A L I+ + G Sbjct: 276 QLDPDNPEIEKPLAKDLFAAHQFDQALQVYQD--LVSSEPNNGKAYLRISDIERH--DGR 331 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------- 294 +Y + +++ + +S+ + + +AE I +K+ ++ HP Sbjct: 332 FQQAYDNLMKAKAITPDSVEIAYDQGLLADALGHFEEAEGIFKKLVAISDHPSNIYSPDE 391 Query: 295 ----------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE----MGS 340 +A++Y + + ++ + + E + ++ Sbjct: 392 KSDRYLFLDRLASVYREQNKVDQA--IAVYEKMALLGHDYAERAY---QSEVDTYGSAHQ 446 Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQ 383 +A A A++ P + + LLLA + K+ + Sbjct: 447 YAKAEGAAQEAVQKMPNDQAMKLLLA----GEMADNGKVQDALK 486 >gi|254521591|ref|ZP_05133646.1| porphyrin biosynthesis protein [Stenotrophomonas sp. SKA14] gi|219719182|gb|EED37707.1| porphyrin biosynthesis protein [Stenotrophomonas sp. SKA14] Length = 431 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 129/394 (32%), Gaps = 20/394 (5%) Query: 4 LIRYFFVISLVICSFIIVS----HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 L+ +++ + + + + +V + +G Y ++ + + + LL+ Sbjct: 7 LVVLLLAVAIGVVAAQWLGADDLNRFGEVILRYGGYDYHSNLPKVALLAVIAVLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 ++ + +G L GL + A K+ ++ Sbjct: 67 SLIAAPF-------RAWGRYRRKQGRVRLIDGLQAYEHGQWQRAEKLLDGAAKDPEVSAV 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178 L V+ A A L+ + + AT + + + + + D +A A Sbjct: 120 ALAN--AVRSAQARADGPAGEALLQRLGESDATLQALLRAEQLLARELPVDAINALDVAA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P W+ + Q A E + L Q K + + L A++L A Sbjct: 178 -IQPLPPRGLWLRTEALAQAGRAHEAYGQLGALRQSKVLPTDASSELEARLAAQALLEAA 236 Query: 239 KGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + +A+ +A ++L+ + + A A ++ N A + LE+ E+ Sbjct: 237 DVNALAAQWEATPKALRPTPDVVGAYASRA---VALNWDEPALLALEQALDQRWDDELVA 293 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +Y L +E + R ++ S + ++AL D A A A+ Sbjct: 294 LYGRLPAERLATRQANLQRWGNVHDGSAALRLAQGRVALAQQQWDAADAFLHEAIASGAG 353 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L ++ A +AL Sbjct: 354 APAWEALGEL-FAQRGEHALAAQCLANALRLQRG 386 >gi|320103772|ref|YP_004179363.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319751054|gb|ADV62814.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 1585 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 93/294 (31%), Gaps = 18/294 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA- 156 I +++ L + +L + A KL+ + + Sbjct: 205 GGIRTVKRLVFAERAAKKDLRNPLFLKEGARASLLLGRREQAEAKLKQLTPDQGPEKNGE 264 Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPW---VTEAVVQQYVLAKEWSRAITF 210 + + + + + A A + PD A+++ + + + I Sbjct: 265 AAYLMGICR-ALTKNTEEAQRLLAQ-AYRLQPDLIEAYAAHAALLRGQMSDEAFHSPIER 322 Query: 211 --LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + + N RA + R+ D + A D ++ +L N A Sbjct: 323 RPLEEVLERVIRANPGRAQAYLVRASFGVDAAQIAA---DLRKAAQLAPNDPEVVFALAA 379 Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALRLEEINKESV 325 L + + +A + ++ P HP ++ T LL +T + R + + V Sbjct: 380 LLQREGRTEEAIERVRPVFDAQPDHPVLSRALTGLLLSRGDTDEAVAVFRRHLDAAPDLV 439 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKI 378 E + + ++ L + +D+ + L AQ+ A + I Sbjct: 440 EDRLAMGELLLGLERLDEVRTLLEQWPESKLLAARKSFLQAQLLVAERKFGEAI 493 Score = 37.2 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 68/227 (29%), Gaps = 26/227 (11%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A A + P L R G A D PD P Sbjct: 353 AAQIAADLRKAAQL---APNDPEVVFA----LAALLQREGRTEEAIERVRPVFDAQPDHP 405 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ A+ + + A+ + A + + + L ++ Sbjct: 406 VLSRALTGLLLSRGDTDEAVAVFRRHLDAAPDL-VEDRLAMGELLLGLERLDEVRTLLEQ 464 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ES L S A+ L+++ K +A +LE + L ++ V Sbjct: 465 WPESKLLAAR---KSFLQAQLLVAERKFGEAIDLLET-----------QVLPELSNDKPV 510 Query: 309 GKLKRALRLEEINK--ESVESLVIVSKIALEMG-SIDQAHAKAMLAM 352 ++ A L ++ E + + A+ + D A A+ LA+ Sbjct: 511 A-MRAAQLLASCHEALGHPEDQLKALRQAIALNPEADSARAQLGLAL 556 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 9/160 (5%) Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQN---------KKRKAEVILEKIWKVNP 291 + + ++ +L + I A A L Q ++R E +LE++ + NP Sbjct: 278 NTEEAQRLLAQAYRLQPDLIEAYAAHAALLRGQMSDEAFHSPIERRPLEEVLERVIRANP 337 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 A + + + ++ E + ++ + G ++A + Sbjct: 338 GRAQAYLVRASFGVDAAQIAADLRKAAQLAPNDPEVVFALAALLQREGRTEEAIERVRPV 397 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 P + + +TD+ + + L A PD Sbjct: 398 FDAQPDHPVLSRALTGLLLSRGDTDEAVAVFRRHLDAAPD 437 >gi|312968146|ref|ZP_07782356.1| cellulose synthase operon protein C [Escherichia coli 2362-75] gi|312286971|gb|EFR14881.1| cellulose synthase operon protein C [Escherichia coli 2362-75] Length = 1026 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 221 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 278 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 279 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 338 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 339 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 398 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 399 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 455 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 456 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLAR-EPTNADAI 509 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 510 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 561 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 453 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLAREPTNADAILGL 512 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 513 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 572 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 573 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 607 >gi|307173081|gb|EFN64211.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Camponotus floridanus] Length = 1092 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 104/314 (33%), Gaps = 45/314 (14%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 146 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 203 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L G++ A + K Sbjct: 204 NLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 255 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 256 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 311 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE---- 294 G + + +++L N A A +L + + +AE ++ P H + Sbjct: 312 GLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNN 371 Query: 295 IANIYTHLLSENTVGKLKR-------ALRLEEIN----KESVESLVIVSKIALEMGSIDQ 343 + Y + +KR A RL E + ++ + + G +++ Sbjct: 372 LVQTYAV-----STANIKREQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNE 426 Query: 344 AHAKAMLAMKIAPR 357 A A++I P Sbjct: 427 ALMHYKEAIRIQPT 440 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 85/230 (36%), Gaps = 11/230 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 281 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 340 Query: 197 QYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + A N + +A N ++ + ++G + + +++ Sbjct: 341 ALKEKGQVVEAEECYNTALRLCPTHADSLNNLVQTYAVSTANIKREQGYIEEATRLYLKA 400 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENT 307 L++ A A L Q K +A + ++ ++ P A+ Y+++ + ++ Sbjct: 401 LEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FADAYSNMGNTLKEMQDI 458 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 G L+ R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 459 QGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 508 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 55/180 (30%), Gaps = 12/180 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLL------EVQIALAERQYNIAHEKL-EMMLQIP 150 + A + ++ + H + L L+ I + A + + P Sbjct: 346 GQVVEAEECYNTALRLCPTHADSLNNLVQTYAVSTANIKREQGYIEEATRLYLKALEVFP 405 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A +L + G LN A + +A+ I P + ++ A+ Sbjct: 406 EF-AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQC 464 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + A + + D G++ + +LKL + A A L Sbjct: 465 YTRAIQINPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 520 >gi|284050200|ref|ZP_06380410.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] gi|291569007|dbj|BAI91279.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 596 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 79/235 (33%), Gaps = 21/235 (8%) Query: 133 ERQYNIAHEKLE-MMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + A + + P ++ + R D A A+ + P+ Sbjct: 69 AGRLEEAIGAYQQAIKLNPEDSWSYNSLG--GIFIKLERWED---AVPVCQHAIQLDPNF 123 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W + Q ++W A + + + + +L ++ + Sbjct: 124 FWAYNNLGQALSQQEQWEDAASVYQKASQINSTF--FWTYNNWGEALIQLERW--SEAVT 179 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302 +++++ N A +L + +A + +K ++NP H +A+ +L Sbjct: 180 VYQKAIEIDPNFCWAYNHLGDALRHLKRWSEAVPVYQKAAEINPNFFWTHSNLADTLVYL 239 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + ++N S ++ ++K ++ ID+A A +++ P Sbjct: 240 KRFDQAIPV--YQSAIKLNANSPQTYYKLAKCLQKVKRIDEAIASFQKVLELKPD 292 >gi|301094298|ref|XP_002896255.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase, putative [Phytophthora infestans T30-4] gi|262109650|gb|EEY67702.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase, putative [Phytophthora infestans T30-4] Length = 977 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 83/258 (32%), Gaps = 18/258 (6%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 KM + + + L L +VQ + A +++ + A +L Sbjct: 162 KMAIMLDPRLVDAHSNLGNLYKVQ-----GRLVDAKHCYAQAIRVKPSFAIAWSNLAGLL 216 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G L++A + +A+ ++PD + + AI + + Sbjct: 217 KDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSALQIRPNF--- 273 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 AI + D G M + H +++L N A +L +A Sbjct: 274 -AIAHGNLASCYYDAGQMELAIHTFRHAIQLEPNFPDAYNNLGNALRECGHLEQAVTCYR 332 Query: 285 KIWKVNP-HPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++ P HP + Y +L + L + + + + + E Sbjct: 333 TALQLKPDHP---HAYNNLGNALKDKGLVKEALHCYTTAARLLPQFAAAHSNIGSVLKEQ 389 Query: 339 GSIDQAHAKAMLAMKIAP 356 G +DQA A A+ I P Sbjct: 390 GKLDQALAHYQQAITIDP 407 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 59/195 (30%), Gaps = 11/195 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G A A+ + P + Y + A Q + + AI Sbjct: 152 GQTEEAVETYKMAIMLDPRLVDAHSNLGNLYKVQGRLVDAKHCYAQAIRVKPSF----AI 207 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + D G + A+ E+++L + A +L + +A + Sbjct: 208 AWSNLAGLLKDDGQLDAAVEHYREAIRLAPDFADAYSNLGNALKESGRVDEAIQAYKSAL 267 Query: 288 KVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++ P H +A+ Y + ++ ++ + E G ++ Sbjct: 268 QIRPNFAIAHGNLASCYYDAGQMELA--IHTFRHAIQLEPNFPDAYNNLGNALRECGHLE 325 Query: 343 QAHAKAMLAMKIAPR 357 QA A+++ P Sbjct: 326 QAVTCYRTALQLKPD 340 >gi|229102222|ref|ZP_04232931.1| hypothetical protein bcere0019_13830 [Bacillus cereus Rock3-28] gi|228681123|gb|EEL35291.1| hypothetical protein bcere0019_13830 [Bacillus cereus Rock3-28] Length = 434 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 33/268 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKELMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEGQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + ++ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELAVPFYVELASIAAKLGKVAEAEEVL 308 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340 +K L + LK A L+ K E L+ V + A++ G Sbjct: 309 QKA-------------LELDPGHLGAILKYAYILKGQEK--YEELITVVERAIDSGEPDT 353 Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 354 QLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|115716503|ref|XP_001201557.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] gi|115772610|ref|XP_788963.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] Length = 1258 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 6/172 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 QI + + Q++ A + Q P T + +Y+L + + A R+ +AL+I P Sbjct: 906 AQIMVKKDQFDEAESLYQKATQLEPPTPDL-LYNLAIIAIQKEQETKAHRHFDEALEIDP 964 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 ++ Y+ + A + ++ K E + L +L D D A Sbjct: 965 QHR-ISLFRSALYIHESG-NAARRTIAIKRLKKLLEIDPPSVQLYSTLALIFMDDEDTSA 1022 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 + H ++L++ + A AK + + +A+ LE + K +P H EI Sbjct: 1023 ALHYYQKALEIRPSDYQALFNTAKIHFEEERPLRAKAYLETLLKHHPNHTEI 1074 >gi|302344317|ref|YP_003808846.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] gi|301640930|gb|ADK86252.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] Length = 412 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 85/264 (32%), Gaps = 16/264 (6%) Query: 104 RKMHSYVSQQHTFHNEY-LVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSL 160 R + +S++ +E L ++ + A ++ A E L+ T A+ L Sbjct: 122 RVVDEMLSKRIDPQHEQFLAHMEAARQAERRKKSAEAIEAYRQALELFEDETAMMALARL 181 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 R GD + A + L +PDA + Y A+ + A+ Sbjct: 182 LR---RAGDEDGATKLLFATLRANPDALKAYLELAMIYRGQSRLEDALKVMQAALGAAER 238 Query: 221 WNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 +A L + + ++ + + + +L Q Sbjct: 239 LKHGGLTKASLYYYMGEIELQLKHLQKALGHFDLAMGELPDDVEMASNIGDALAGQGHYA 298 Query: 278 KAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVS 332 ++E +K +++ P +A++Y H L + + L ++ Sbjct: 299 ESEQYYQKALELD--PSLAHVYNRLGIAHRRQGKHDMALNLYRKALAFHPNDEHLLYNMA 356 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 ++ E+ A A++I P Sbjct: 357 RVHWELAEYQLASEVLTKALEINP 380 >gi|196033346|ref|ZP_03100758.1| TPR domain protein [Bacillus cereus W] gi|195993780|gb|EDX57736.1| TPR domain protein [Bacillus cereus W] Length = 420 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 86/278 (30%), Gaps = 53/278 (19%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 K +AE +L+K L + LK A L+E K E L+ V + Sbjct: 285 GKIAEAEEVLQKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVE 329 Query: 334 IALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 A++ G D A AK L M + + Sbjct: 330 RAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|149924911|ref|ZP_01913243.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1] gi|149814221|gb|EDM73832.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1] Length = 735 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 36/107 (33%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L + A A + A +L+ A+ L+ + GD A YA +A+ Sbjct: 625 LLRSARRAYASGRRKAAERLYTQVLRDHPRDLDALVGLHRINFDSGDYQDALDYAERAVK 684 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 I P + + +++ A T Q R R LL Sbjct: 685 IRPRQGRLRIFAGDACMKVRDYGCARTHYEQAAALNHARARQRLELL 731 >gi|162451193|ref|YP_001613560.1| TPR repeat-containing protein [Sorangium cellulosum 'So ce 56'] gi|161161775|emb|CAN93080.1| tetratricopeptide repeat protein [Sorangium cellulosum 'So ce 56'] Length = 2081 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 25/206 (12%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +ALD+ P + ++Q Y +W R + L + + + +R L + Sbjct: 1563 EEALDLEPQNHVLLHKLLQLYQRTGQWERMVDCLQRIAELEPQPDRKSRYLYTMAQIYRD 1622 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP---- 293 D + ++L L +S+ A K L +Q + ++ LE+ ++ H Sbjct: 1623 KLDDPARAVELFNDTLDLNPHSLEAFERINKILTAQKEWKQ----LERAYRKMLHRVAGK 1678 Query: 294 -----------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + IY L + T ++ + E +I++++ + D Sbjct: 1679 GNTDLEYSLWHALGLIYRDRLGDRTAA-VETFRMASRLKPEDATEHLILAELYEQSEQFD 1737 Query: 343 QAHAKAM-----LAMKIAPRKEIFLL 363 A + MKI P K ++ L Sbjct: 1738 LATGEFQAMVKIDPMKIDPYKRLYRL 1763 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 90/240 (37%), Gaps = 25/240 (10%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 DL++A+ + ++I P EA+ + Y ++W I ++ A++ + + Sbjct: 1122 DLSAARL--EQVVEIDPSHEPALEALERCYRRLRQWHDLINTYDRHINAAEDRQKKIELW 1179 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + + D+ + + + + D I A AK Q+ KA +E + + Sbjct: 1180 SHTAKVYAEEIEDLDRAIDAYLNIVDIQDTHIPALEALAKLYEKQDNSAKA---IEYMTR 1236 Query: 289 VNPHPEIA-------NIYTHL---LSENTVGKLK---RALRLEEINKESVESLVIVSKIA 335 V ++ +Y + L E +++ R +++ V +L + IA Sbjct: 1237 VA---DLTADGKQRVEMYFRIGRQLDEKLGERVQAQERFEMALDLDPSHVPTLAALRVIA 1293 Query: 336 LEMGSIDQAHAKA--MLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWTQSALHAMPD 391 ++ D+A APR + LL L ++ + + AL + PD Sbjct: 1294 IDAADWDRAARYLDQEQMNTDAPRAKARLLVELGKLRDDMLGEHALAVQAYEMALQSDPD 1353 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 80/233 (34%), Gaps = 18/233 (7%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + + R+ D+ A + LD+ + P A+ Y +WS L + A + Sbjct: 533 HLLADRLNDVQGAVETWKRVLDLRGEDPEALGALSNLYERVGQWSELCDVLERHYDIAID 592 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR--- 277 A+LL L + G +S D L + ++ A A +N+ Sbjct: 593 DESRVAVLLRRAKLFHEQLGRDDSSLDDYQRVLDIDYANLEALYAIAAIWRLRNEPEQIV 652 Query: 278 --------KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 +A +L + + E+ Y H+L + + +L E++ + E + Sbjct: 653 SSLHQTVDRARDVLPAENVIALYRELGTTYQHVLGQ-AYDAIDAWRKLLEVDPKDFE-AM 710 Query: 330 IVSKIALEMGSI-----DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + L D +A A + +L +AQI + D+ Sbjct: 711 AALENLLRAEGRWVEVVDVKMGRAAAYESPADKVREYLEVAQIWEHQVEEKDR 763 >gi|160890825|ref|ZP_02071828.1| hypothetical protein BACUNI_03270 [Bacteroides uniformis ATCC 8492] gi|317479742|ref|ZP_07938864.1| tetratricopeptide [Bacteroides sp. 4_1_36] gi|156859824|gb|EDO53255.1| hypothetical protein BACUNI_03270 [Bacteroides uniformis ATCC 8492] gi|316904112|gb|EFV25944.1| tetratricopeptide [Bacteroides sp. 4_1_36] Length = 319 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 10/272 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+ + A K + E + YL Q+ + + AH+ LE M +I Sbjct: 33 DGMRAQRMGRTDYAIKCFTEALA-IQEDFETMGYL--AQVYTQTSELDEAHKLLERMTEI 89 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 SL D + A KA++I + + + I Sbjct: 90 EPEHISTYLSLANVCYMQEDYPAMAGAAKKAIEIEEGNAMAHYLLGKADNGQGDGIMCIA 149 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + ++ R + R+ + D L A + K Sbjct: 150 HLTKAIVLKDDFIEAR----LLRAEALVQMQQYKEAMEDIDTILAQDPEDESAILLRGKI 205 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVE 326 + K KAE +K+ ++NP E A +Y ++ ++ E+N E Sbjct: 206 EEATGDKEKAESSYQKVTELNPFNEQAFLYLGQLYITQNKLAEAIELFTEATELNPNFAE 265 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + L G + + +++ P++ Sbjct: 266 AYHERGRAKLLNGDKEGSAEDMKKGLELNPKE 297 >gi|148237608|ref|NP_001088513.1| interferon-induced protein with tetratricopeptide repeats 1 [Xenopus laevis] gi|54311460|gb|AAH84851.1| LOC495383 protein [Xenopus laevis] Length = 462 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 20/200 (10%) Query: 171 NSAQRYATKALDISPDAPWVTE--AVVQQYVLAKEWS-------RAITFLNQKKKNAKEW 221 A+ + KAL++ P P + A V + ++ + L + + Sbjct: 156 ERAKEWFEKALELDPHNPELNSGYATVMYRLENQDNRFYANNNCECLELLKRAVTLNEND 215 Query: 222 NRNRAILLI-ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +A+L + L ++G+ I +A+ + I AAK + K A Sbjct: 216 SVIKALLALKYHYLGRGEEGETI--MEEALRQTPDSPDLI---RHAAKFYRREGKIDYAI 270 Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 IL+K + P H EI Y ++ ++ + K V++ + ++K+ Sbjct: 271 TILKKALEKTPTSCHLHYEIGLCYEQKMNMFVSLATSHFEKVLQYKKRFVDAYIHLAKMY 330 Query: 336 LEMGSIDQAHAKAMLAMKIA 355 ++ +A + + Sbjct: 331 VKQNQFKKAEDTFQKGLNLE 350 >gi|300692627|ref|YP_003753622.1| hypothetical protein RPSI07_3009 [Ralstonia solanacearum PSI07] gi|299079687|emb|CBJ52364.2| conserved exported protein of unknown function (TPR-like) [Ralstonia solanacearum PSI07] Length = 641 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 22/215 (10%) Query: 191 TEAVVQQY---VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 EA++Q + + + A++ L + + + R L +AR+ A D + Sbjct: 192 AEAILQLQQQMSKSNDPAGAVSALQRLTVH--DMQRPETHLALARAKVVAK--DNAGALS 247 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302 + +LKL A+I AA+ L + N A L K P H +A +Y + Sbjct: 248 ELDTALKLRPGYEDAAILAAE-LRADNNPDAAIAGLRTFLKAAPASIDGHLALARMYL-V 305 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-- 360 ++N + + L +I + + + L+ D A + A + Sbjct: 306 SNQNDQARAE-FEALRKIAPNDPRIPLALGLLNLQQRQYDAAERYLKEYVAQAAKSPSLS 364 Query: 361 ----FLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + LAQ+ + + + W A Sbjct: 365 PEPGYQGLAQVAE-ERRDYAGAIAWLDKIAGASNG 398 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 53/142 (37%), Gaps = 5/142 (3%) Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + A ++L S+ A +++ + + E +L+ + A Sbjct: 138 PAQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 197 Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L S + G + RL + + E+ + +++ + A ++ A+K+ P Sbjct: 198 LQQQMSKSNDPAGAVSALQRLTVHDMQRPETHLALARAKVVAKDNAGALSELDTALKLRP 257 Query: 357 RKEIFLLLAQIEQANSHNTDKI 378 E +LA +A+++ I Sbjct: 258 GYEDAAILAAELRADNNPDAAI 279 >gi|303316892|ref|XP_003068448.1| tetratricopeptide repeat containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240108129|gb|EER26303.1| tetratricopeptide repeat containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 727 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 16/166 (9%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------E 192 A L Q P Y + GD A ++ +AL + PD+ + Sbjct: 415 AMSLLRENSQDPDALFLRGRLFYLQ----GDNEQAIKHFKRALSLDPDSTETVKYLRMVQ 470 Query: 193 AVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 +++ A+ + AI + + LL R+ + + + + Sbjct: 471 KLLRHKDEGNAAFKARRYREAIKLYTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAI 530 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++L+L A AK+ KA L+ I + NPH Sbjct: 531 EDCTKALELDPTYSKAKRVRAKAYGGTGDWEKALNELKSIAESNPH 576 >gi|85858278|ref|YP_460480.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85721369|gb|ABC76312.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] Length = 649 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 63/202 (31%), Gaps = 14/202 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 LY + + + A + A L +SP + K+ + A+ L ++ Sbjct: 119 LYLAARQ---PDKALKKAETVLQLSPGNEDALLLKAAALIALKDSADALAILRDMRQRG- 174 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R L + + + + + + +++ + A K +A Sbjct: 175 ---VKRPELFLLLASSHLQNNSIKEAQDALNTGIADNPKAVILYLTLADLYTRDKKIDEA 231 Query: 280 EVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 L+K+ + P +A +Y H+ + + + + E + V Sbjct: 232 AATLQKVIALEPKNSRYRLTLAGLYWHVGQNDKA--VATLQEVVAAEPANEEGRLQVGGF 289 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 + G A + ++ P Sbjct: 290 YIARGRFADAERELKAGIQAIP 311 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 70/218 (32%), Gaps = 19/218 (8%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + LY+ +G + A + + P V Y+ ++ A L Sbjct: 250 LTLAGLYWH---VGQNDKAVATLQEVVAAEPANEEGRLQVGGFYIARGRFADAERELKAG 306 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-----AAKS 269 + + + R A S + G + E L L ++ I A+ Sbjct: 307 IQAIPKSFKLR----FALSDLYLNTGMPDRAISLLNECLALEKDAGNPQILQTKNALARI 362 Query: 270 LISQNKKRKAEVILEKIWKVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 +++ + ++A ++++ K N H LL + G + + + Sbjct: 363 HLARQEVKEASRYVDEVIKENSKDVDAH--FTKGNIALLKRDGAGAVAEFRTVTSERPQL 420 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + + +++ + + A A+K PR L Sbjct: 421 IPGHIRLAEAHMLNKEYNLASDTLEKALKANPRSAPLL 458 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 14/213 (6%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MML 147 G +++ + A V+ + + L + + ++YN+A + LE + Sbjct: 392 TKGNIALLKRDGAGAVAEFRTVTSERPQLIPGHIRL--AEAHMLNKEYNLASDTLEKALK 449 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE---- 203 P + L + SA + + +P + Q Y + Sbjct: 450 ANPRSAPLLSAPLVQVYMKQKKYESALALLEERIQQNPGDAFALNLRGQVYNAQGDELKA 509 Query: 204 ---WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNS 259 + +A+ + + E L S + GD+ + A ++ + +N Sbjct: 510 AESYRQAMAVYEKVLQKQPENWVAANDLAFLLSEYGSKPGDLDRALALARKAYGRNAEN- 568 Query: 260 IMASI-CAAKSLISQNKKRKAEVILEKIWKVNP 291 A + + R+AE ++ K P Sbjct: 569 -PAVLDTLGWIYYKKGDYRQAEALIVKAINKAP 600 >gi|332184481|gb|AEE26735.1| hypothetical protein FN3523_1432 [Francisella cf. novicida 3523] Length = 385 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 84/266 (31%), Gaps = 33/266 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I ++Y + + ++ + + + I + LF +L Sbjct: 1 MIKVFKLIIAVALATLVGIWATNYHGYIMLVLADKTIKMNLVAFVFIAFILLFILVLCIR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDKGYKALYTGLMSIAAHNIPLARKM---HSYVSQQ 113 + R P +LF +++ + I N L +K H Sbjct: 61 IVRSAFKFPYLLFSWVIGLFSVDKHERFTDLVAD----ITLENNRLVKKFSIGHIMRLTP 116 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSLYF-ESCRIGDLN 171 + L L V A + + L+ + T + F VY LY + Sbjct: 117 RHLKDYILFRKLNVIAA--TKDIKELEKALKHIDSKTITYKFFEVYKLYLVQKLSEAQTK 174 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A P+ + + + + A+ L + A Sbjct: 175 IAVMLEKNDPRFMPNIVNLAG---DIALADGDDTFALKILEK---------------YDA 216 Query: 232 RSLENADKGDMIASYHDAIESLKLCD 257 E+ ++ +I + A ++ KL D Sbjct: 217 YLKEDLEENLIILALTAAKDANKLAD 242 >gi|326433006|gb|EGD78576.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 828 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 41/341 (12%), Positives = 94/341 (27%), Gaps = 73/341 (21%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPAT 152 ++AA AR+ H + +V +++ A E +L T Sbjct: 254 AVAAVEAMRARREHKTEAFAQLCGQVGVVL-------NTFGEHDQAIAYYETALLIYRRT 306 Query: 153 REFAVYS---------LYFESCRIGDLNSAQRYATKALDIS--------PDAPWVTEAVV 195 L R G + A ++ KAL I P + Sbjct: 307 E--GKKGENVATLHNNLGIACRRKGAYDKAIQHYKKALAIRVEVLGEKHPTTAETHNNLG 364 Query: 196 QQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + ++ AI ++ + + + N + + KG+ + + Sbjct: 365 ELHRHKGDYDSAIECYSRANEVFVETLGDKDSNTGMTYGNLGIAYLSKGEYDKAIEFIEK 424 Query: 252 SLKLCDNSI----MASICAAK----SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 +L + + + + + + KA EK IY Sbjct: 425 ALAIMVEILGDKHPNTAMTLGNLGIAYLEKGDHDKATDQFEKA---------LAIYLEAF 475 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--------KIA 355 + + + ++ + + +E D+A A+ + Sbjct: 476 GD--------------KHPATADTYTNLGNVYVEQRDFDRAVEYLEKALAIRVEAFGENH 521 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSAL---HAMPDPL 393 P + L + + + ++ + + AL A P Sbjct: 522 PSTAMALENIGLLHGDRGDKEQASAYVERALGVFEATLGPD 562 >gi|229115066|ref|ZP_04244476.1| hypothetical protein bcere0017_13610 [Bacillus cereus Rock1-3] gi|228668206|gb|EEL23638.1| hypothetical protein bcere0017_13610 [Bacillus cereus Rock1-3] Length = 420 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 89/268 (33%), Gaps = 33/268 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 121 QKLLKAKELMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + ++ + A K +AE +L Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELAVPFYVELASIAAKLGKVAEAEEVL 294 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340 +K L + LK A L+ K E L+ V + A++ G Sbjct: 295 QKA-------------LELDPGHLGAILKYAYILKGQEK--YEELITVVERAIDSGEPDT 339 Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 340 QLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|300117453|ref|ZP_07055243.1| TPR domain protein [Bacillus cereus SJ1] gi|298725288|gb|EFI65940.1| TPR domain protein [Bacillus cereus SJ1] Length = 420 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 90/281 (32%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A+AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAYAKKQLEMYSDALKHYESAYT 367 >gi|165923888|ref|ZP_02219720.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii RSA 334] gi|165916673|gb|EDR35277.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii RSA 334] Length = 561 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 31/261 (11%), Positives = 76/261 (29%), Gaps = 41/261 (15%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A E +L+ + A++ ++ + A Y +AL + P Sbjct: 15 QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLCRNDEALHYIDRALLLEPQNATFQN 74 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A +Q + ++ A + + + ++ Sbjct: 75 SRGNILSQHGKLVEATIAYDQAIQLQPDY----ATAYNNIANCFFRQKKFDNAKKAYQKA 130 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIY-------- 299 + L + A A+ LI +A L++ ++ H ++A++Y Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSK 190 Query: 300 --------THLLSENTVGK----------------LKRALRLEEINKESVESLVIVSKIA 335 L EN + + +N E + ++ Sbjct: 191 AITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY 250 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 L+ G +A + ++ P Sbjct: 251 LQRGDHKEALIHYLRQLEKKP 271 >gi|42780720|ref|NP_977967.1| TPR domain-containing protein [Bacillus cereus ATCC 10987] gi|47565981|ref|ZP_00237019.1| TPR domain protein [Bacillus cereus G9241] gi|52143829|ref|YP_082999.1| TPR repeat-containing protein [Bacillus cereus E33L] gi|222095248|ref|YP_002529308.1| tpr-repeat-containing protein [Bacillus cereus Q1] gi|42736640|gb|AAS40575.1| TPR domain protein [Bacillus cereus ATCC 10987] gi|47556898|gb|EAL15228.1| TPR domain protein [Bacillus cereus G9241] gi|51977298|gb|AAU18848.1| TPR-repeat-containing protein [Bacillus cereus E33L] gi|221239306|gb|ACM12016.1| TPR-repeat-containing protein [Bacillus cereus Q1] gi|324325635|gb|ADY20895.1| TPR-repeat-containing protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 420 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY E +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|302343194|ref|YP_003807723.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus baarsii DSM 2075] gi|301639807|gb|ADK85129.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Desulfarculus baarsii DSM 2075] Length = 467 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 26/280 (9%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 +G +AL L ++ + A K + + + V + A Sbjct: 161 RGRRALMAALENLVVGDFESAEKNITEARGYNPHDEATMFMQSIVDGVNSGGLRKEAAVT 220 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 F + GD+ A++ KA P Sbjct: 221 F---------------GDGFLAMLEGDVAQAEKLFGKAAADDPRLWQARLFEANMMAGQG 265 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 +A L + A ++ ++ + +G M + +LK N A Sbjct: 266 RGDQARALLEALVAQKPDV----AEAHLSLAMMSMGEGKMGQGKQELERALKANPNMAQA 321 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRL 317 + + + +AE + +P + ++ IY HL + Sbjct: 322 LYQMGQVAVYEGDAGRAEGYFKAAIAADPYYEEAYNDLGLIYAHL--GRVADAEASFNKA 379 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E N + + + + ++A + A+ I P Sbjct: 380 LEFNPTFFPAHIGLGNLYGRERQFNKAVDEFNKALTIDPT 419 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 16/179 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146 L +MS+ + + N Q+A+ E A + + Sbjct: 289 LSLAMMSM--GEGKMGQGKQELERALKANPNMAQALYQMGQVAVYEGDAGRAEGYFKAAI 346 Query: 147 LQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 P E + +Y R+ D ++ KAL+ +P + Y + Sbjct: 347 AADPYYEEAYNDLGL--IYAHLGRVADAEAS---FNKALEFNPTFFPAHIGLGNLYGRER 401 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 ++++A+ N+ + A +L + A ++ L + Sbjct: 402 QFNKAVDEFNKALTIDPTF----APAYYNAALAYVAMDMWADAIRYADKAASLGMDIPP 456 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 59/193 (30%), Gaps = 10/193 (5%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 M AR + + Q + +L +++ E + ++LE L+ Sbjct: 260 MMAGQGRGDQARALLEALVAQK--PDVAEAHLSLAMMSMGEGKMGQGKQELERALKANPN 317 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A+Y + + GD A+ Y A+ P + Y + A N Sbjct: 318 MAQALYQMGQVAVYEGDAGRAEGYFKAAIAADPYYEEAYNDLGLIYAHLGRVADAEASFN 377 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L E + + ++L + A AA + ++ Sbjct: 378 KALEFNPTFFPAHIGLGNLYGRERQFN----KAVDEFNKALTIDPTFAPAYYNAALAYVA 433 Query: 273 ----QNKKRKAEV 281 + R A+ Sbjct: 434 MDMWADAIRYADK 446 >gi|149178802|ref|ZP_01857383.1| TPR repeat [Planctomyces maris DSM 8797] gi|148842343|gb|EDL56725.1| TPR repeat [Planctomyces maris DSM 8797] Length = 591 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 91/244 (37%), Gaps = 7/244 (2%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 +E V L + + A + +L A + A Y L + GDL+ + R Sbjct: 2 DEVQVQLKAALAHHQAGELDQAATIYQHVLDTNARQWEARYYLGTLQLQRGDLDQSIRTF 61 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + + + P+ P V + Y A +W A Q + + R Sbjct: 62 LQVVQLQPELPDVHNNLGVAYHAAGKWQEAGQSFEQAIRLNPHYER----AYFNLGSLFE 117 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIA 296 +G + ++ L ++ A +L S + +AE I ++ P +++ Sbjct: 118 SRGVFSEAVKCYQKAHDLSPGNLDTHQKLADALKSAGEWARAEDIYRELLVAKPGDFDLS 177 Query: 297 --NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 Y +L + + +I+ + + LV +S + +G+ID A A ++++ Sbjct: 178 MKLAYVLVLQRQYQEAIMLYESMLKISPDHYQILVSLSYVYEAVGNIDAAIEAAERSIQV 237 Query: 355 APRK 358 AP + Sbjct: 238 APTQ 241 Score = 37.2 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 46/151 (30%), Gaps = 6/151 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + ++ A + +L ++ Y + A L ISP Sbjct: 147 ADALKSAGEWARAEDIYRELLVAKPGDFDLSMKLAYVLVLQR-QYQEAIMLYESMLKISP 205 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D + ++ Y AI + + A + + + + K D+ + Sbjct: 206 DHYQILVSLSYVYEAVGNIDAAIEAAERSIQVAPT--QPEGYNNLGNAFKL--KHDLENA 261 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + +++ L + MA A + + Q Sbjct: 262 SENFRKAISLRPDFAMAEFNLATTRMLQGNL 292 >gi|153207820|ref|ZP_01946420.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii 'MSU Goat Q177'] gi|212218831|ref|YP_002305618.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuK_Q154] gi|120576372|gb|EAX32996.1| tetratricopeptide repeat protein/methyltransferase [Coxiella burnetii 'MSU Goat Q177'] gi|212013093|gb|ACJ20473.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuK_Q154] Length = 561 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 31/261 (11%), Positives = 76/261 (29%), Gaps = 41/261 (15%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A E +L+ + A++ ++ + A Y +AL + P Sbjct: 15 QGSLKNALENYHKVLEDDPKQTAALHGAGIALSQLCRNDEALHYIDRALLLEPQNATFQN 74 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A +Q + ++ A + + + ++ Sbjct: 75 SRGNILSQHGKLVEATIAYDQAIQLQPDY----ATAYNNIANCFFRQKKFDNAKKAYQKA 130 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIY-------- 299 + L + A A+ LI +A L++ ++ H ++A++Y Sbjct: 131 IALKPHFANAHFNYARLLIELENYHQAIAELKRTVAMSSHHSAAFSQLAHVYMYLGDFSK 190 Query: 300 --------THLLSENTVGK----------------LKRALRLEEINKESVESLVIVSKIA 335 L EN + + +N E + ++ Sbjct: 191 AITYYEKRLALEPENADAQYDCGLAHLKDNQFQKAIDYFTNALLLNPEHPDCHYSLATAY 250 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 L+ G +A + ++ P Sbjct: 251 LQRGDHKEALIHYLRQLEKKP 271 >gi|300721441|ref|YP_003710716.1| protoheme IX synthesis protein [Xenorhabdus nematophila ATCC 19061] gi|297627933|emb|CBJ88479.1| protein in late step of protoheme IX synthesis with TPR-like domain [Xenorhabdus nematophila ATCC 19061] Length = 401 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 122/374 (32%), Gaps = 16/374 (4%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHM-LHKR 79 +S + V I + TS ++ + F I + R Sbjct: 21 MSGHQGYVLIQTDSNNITTSITAVVIMFLLLQFLLIFIGWCYRRLKRTSTSTHSWIFGGF 80 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 ++ L+ +A + + H + YLL + A Y Sbjct: 81 KRNRARSQTRQALLKLAEGDFK--QVEHLMTRNADHAEYPVVNYLLAAEAAQQRGDYFHT 138 Query: 140 HEKLEMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 ++ +E ++ + V S G++++A+ K L+ +P P V + Y Sbjct: 139 NQYIERAAEVADKDQLPVDISRVRIQLAQGEIHAARNGVDKLLNHAPRHPEVLRLAERAY 198 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS------LENADKGDMIASYHDAIES 252 L+ + I L K AK ++ + + ++ A+KG + Sbjct: 199 SLSGAYQALIDVLPSMIK-AKLYDEEKIHAIRQQAYVGLMNQVFAEKGCTGLKAWWKDQG 257 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 K+ + ++ + A+ LI+ N A+ I+ K + + HL + + K Sbjct: 258 RKIRQDIVLQVVM-AEHLIACNDHDTAQQIILDGLKQQYDERLLLLIPHLKANDAEAIQK 316 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ----IE 368 L + + + + ++AL G A A A+ P + LA ++ Sbjct: 317 NLTHLLKQHGATPLLNSTMGQVALRHGEWANAEAAFKAALAQRPDAHDYAWLADALDKLQ 376 Query: 369 QANSHNTDKILYWT 382 + + + Sbjct: 377 KHEEATQTRSKGFM 390 >gi|71895939|ref|NP_001025642.1| PRP6 pre-mRNA processing factor 6 homolog [Xenopus (Silurana) tropicalis] gi|60550964|gb|AAH91611.1| MGC97740 protein [Xenopus (Silurana) tropicalis] Length = 972 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 103/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 610 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 667 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 668 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAQD 727 Query: 229 LIARSL--------------ENADKGDMIA-SYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + ++G+ I + + LK C +S + ++ Sbjct: 728 LCEEALRHYEDFPKLWMMKGQIEEQGEQIEKARDAYNQGLKKCLHSTPLWLLLSRLEEKV 787 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP PE+ L E G A L +E S ++ Sbjct: 788 GQLTRARAILEKSRLKNPKTPELWLESVRL--EFRAGLKNIANTLMAKALQECPNSGILW 845 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 846 AE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 903 Query: 391 D 391 D Sbjct: 904 D 904 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 319 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 375 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 376 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DLRAKKRVLRKA 427 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E +VE + ++++ + + A Sbjct: 428 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTNVELWLALARL----ETYENA 480 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 481 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 526 >gi|50120884|ref|YP_050051.1| tetratricopeptide repeat protein [Pectobacterium atrosepticum SCRI1043] gi|49611410|emb|CAG74858.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 389 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 15/243 (6%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + + + R AV L + G + A+ + +D Sbjct: 83 GEVDRAIRIHQALTESASLTFEQRLLAVQQLGRDYMAAGLYDRAEEIFNQLVDEEDFRRS 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++Q + +W AI + K K+ R A +L D+ + Sbjct: 143 ALQQLLQIHQATSDWLTAIDVAEKLVKMGKDELRVDIAHFYCELALLAMGSDDLDKALTF 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIANIYTHL 302 + + ASI + ++Q +A L K P + Y HL Sbjct: 203 LKKGASADNQCARASIMMGRIYMAQQDYSRAVEALRQVLDQDKELVSETLPMLQECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF- 361 NT+ R E N + + ++++ I + A ++ P +F Sbjct: 263 --GNTLDWAHFLKRCVEENTGAT-AELMLADILEREEGAEVAQVYINRQLQRHPTMRVFH 319 Query: 362 LLL 364 L+ Sbjct: 320 RLM 322 >gi|114320095|ref|YP_741778.1| tetratricopeptide repeat protein [Alkalilimnicola ehrlichii MLHE-1] gi|114226489|gb|ABI56288.1| Tetratricopeptide TPR_2 repeat protein [Alkalilimnicola ehrlichii MLHE-1] Length = 389 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 98/306 (32%), Gaps = 27/306 (8%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R +A+ L + R G L+ A+ + +D++ Sbjct: 83 GEVDRAIRIHQNLIARPALSRQQRTYALLELGEDYMRAGLLDRAETLFEEVIDLNHHVEP 142 Query: 190 VTEAVVQQYVLAKEWSRAI-TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y KEW +AI L +K +A+ + A + E GD+ + Sbjct: 143 ALRQLLAIYQQEKEWDQAIGAALRLEKVSAQNLHPQVAHFYCEMAGEAWAAGDLSRARTL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 +L + ASI A R+A + ++ P A + + + Sbjct: 203 YKRALTHDPRCVRASIQAGHLARQMGHARQAVRLYRQV------PTQAPEFVGEVLDGLY 256 Query: 309 GKLKRALRLEEINKESVESLVIVSKI----ALEMGSI-------DQAHAKAMLAMKIAPR 357 L+ +L E ++ L+ K AL + A ++ P Sbjct: 257 QALESLGQLHRY-PEFLDQLLATGKAPVAVALAKVEWLRAEAGHEAAMRWLAEHLEAQPS 315 Query: 358 KEIFLLLAQIEQANS----HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK 413 L L ++ + L+ T AL G+ + P K Sbjct: 316 VRGLLRLVEMSDGAPPVAEGPVEAALHRTLRALLEARAQYLCGQCGFTARTLFWQCPGCK 375 Query: 414 TLCYFE 419 + Sbjct: 376 SWGSIR 381 >gi|255010914|ref|ZP_05283040.1| TPR repeat-containing protein [Bacteroides fragilis 3_1_12] Length = 289 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 8/167 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + L I L + + A+ ++M + T + + Y R D A+ + Sbjct: 111 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 168 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L+I P + ++ ++ LNQ E A+L +AR+ D Sbjct: 169 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPE----DAVLYVARADVERDM 224 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L NS+ A + + Q KK +A+ EK Sbjct: 225 KHEDLALVDLDEAIRLAPNSVDAYLLRGDIYLDQKKKSQAKADFEKA 271 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 63/180 (35%), Gaps = 15/180 (8%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++A L Q + + N + A+L L G + +L + ++ + Sbjct: 55 AQAEDLLKQALR-LEPKNPHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILL 113 Query: 265 CAAKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALR 316 A + Q + KA + +K + + Y + L + +L R Sbjct: 114 NRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQR 168 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375 L EI+ ++ + ++ + + G ++ + P +++ A +E+ H Sbjct: 169 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPEDAVLYVARADVERDMKHED 228 >gi|168008775|ref|XP_001757082.1| Paf1 complex protein [Physcomitrella patens subsp. patens] gi|162691953|gb|EDQ78313.1| Paf1 complex protein [Physcomitrella patens subsp. patens] Length = 999 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 15/193 (7%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREF 155 LA H + Q ++ + Y++A L+ P Sbjct: 272 EAALAATDHVLIKAQSYYN--------LARSYHTREDYDMAARYYRASTAELKNPKDFIL 323 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y L ++GD +A K L++ PD +AV +A+ + Sbjct: 324 PYYGLGQVHLKLGDWKAALASFEKVLELYPDNCETLKAVGHILGHQGRKEKALEHFKKAT 383 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQ 273 + A L + L ++D + S+ A LK + ++ + Sbjct: 384 RMNP--KDVDAWLEMGELLVSSDFAAALDSFQTAHTLLKRSQEVVPLALLNNIGVLHFEK 441 Query: 274 NKKRKAEVILEKI 286 ++ A ++ Sbjct: 442 DELESARKAYKQA 454 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 29/268 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + R Y +E ++ + Q+ +A+ + A E +++L A+ Sbjct: 107 DEHFIRATQYYNKASRIDQDEASTWVGKGQLLVAKGELEQAQEVFKIVLDGQRDNVAALL 166 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 G A + KAL I P P + V+Q + + + + Sbjct: 167 GQACVQFNSGRFQEALKLYKKALQIHPQCPASAFDRVLQL-----DGNNVEALVGSGIID 221 Query: 218 --AKEWNRNRAILLIARSLENADKGDMIASYHDA-----IESLKLCDNSIMASICAAKSL 270 + + NR +A L + +A H A ++ + + A++ A Sbjct: 222 LNSGDENRVQAGLEKMLAAFEIYPYCSMALNHLACHYFFLDQHPMVEQLTEAALAATDH- 280 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-ESLV 329 +L K + +A Y + + RA E N + Sbjct: 281 -----------VLIKA---QSYYNLARSYHTREDYDMAARYYRASTAELKNPKDFILPYY 326 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ L++G A A +++ P Sbjct: 327 GLGQVHLKLGDWKAALASFEKVLELYPD 354 >gi|73997220|ref|XP_543747.2| PREDICTED: similar to ARG99 protein isoform 2 [Canis familiaris] Length = 865 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 91/307 (29%), Gaps = 52/307 (16%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL ++P Sbjct: 473 ANFLKDQGRNREAISHYRTALRLYPRHASALNNLGTLTR---DAAEAKMYYQRALQLNPQ 529 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L + E+ + L + + Sbjct: 530 HNRALFNLGNLLKSQEKKEEAITLLKDSIQYGPEFADAYSSLASLLAEQERFKEAEEIYQ 589 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++ L + +A + + S Sbjct: 590 AGIKNCPDSSDLHNNYGVFLVDTGSPEKAVAHYQQAIALSPSHHVAMVNLGRLYRSLGDN 649 Query: 277 -------RKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESL 328 ++A + K ++P + +Y + E + + A + E Sbjct: 650 SAAEEWYKRALQVARKAEILSP---LGALYYNTGRYEEALQIYREA---AALQPSQRELR 703 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI-EQANSHNTDKILYWTQSAL 386 + ++++ MG +A + E + LL+ I + H+ K L AL Sbjct: 704 LALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQEHHD--KALDVIDKAL 761 Query: 387 H-AMPDP 392 DP Sbjct: 762 QLKPKDP 768 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 35/284 (12%), Positives = 90/284 (31%), Gaps = 39/284 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + + A + H+ +V L ++ + + A E + LQ+ Sbjct: 606 GVFLVDTGSPEKAVAHYQQAIALSPSHHVAMVNL--GRLYRSLGDNSAAEEWYKRALQVA 663 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + Sbjct: 664 RKAEI-LSPLGALYYNTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQ------T 716 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAK 268 +K + L R L + + ++L+L + ++ Sbjct: 717 KEAEKMTNHIVSEETGCLECYRLLSAIYSKQEHHDKALDVIDKALQLKPK-DPKVV--SE 773 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 ++ + + + +L+K ++ E+N + ++ Sbjct: 774 LFFTKGNQLREQNLLDKAFES------------------------YKAAVELNPDQAQAW 809 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + + I G+ A A A+++ P ++ LA++++ Sbjct: 810 MNMGGIQHIKGNYVSARAYYERALQLVPDSKLLQENLAKLDRLE 853 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 102/282 (36%), Gaps = 23/282 (8%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L LL Q ++ A E + ++ ++ Y ++ G A + Sbjct: 570 SLASLLAEQ-----ERFKEAEEIYQAGIKNCPDSSDLHNNYGVFL--VDTGSPEKAVAHY 622 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ +SP + + Y + S A + + + A +A +L Sbjct: 623 QQAIALSPSHHVAMVNLGRLYRSLGDNSAAEEWYKRALQVA-----RKAEILSPLGALYY 677 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-----ILEKIWKVNPH 292 + G + E+ L + + A+ L + ++AE + E+ + + Sbjct: 678 NTGRYEEALQIYREAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECY 737 Query: 293 PEIANIYTHLLSEN-TVGKLKRALRLEEINKESV-ESLVIVSKIALEMGSIDQAHAKAML 350 ++ IY+ + + + +AL+L+ + + V E E +D+A Sbjct: 738 RLLSAIYSKQEHHDKALDVIDKALQLKPKDPKVVSELFFTKGNQLREQNLLDKAFESYKA 797 Query: 351 AMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A+++ P + ++ + I+ N + + AL +PD Sbjct: 798 AVELNPDQAQAWMNMGGIQHIK-GNYVSARAYYERALQLVPD 838 >gi|222056573|ref|YP_002538935.1| hypothetical protein [Geobacter sp. FRC-32] gi|221565862|gb|ACM21834.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 264 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 71/222 (31%), Gaps = 12/222 (5%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GY L L A + ++ E L I Q+ A Sbjct: 41 GYFYLGEAL--AETGKQAEAIESIKAGLKRAPEDIEAWTSL--GDILFESGQHKEAIAAY 96 Query: 144 EMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + ++++ L + S D A + KAL++ P + A+ Y Sbjct: 97 KKVIELRPAEADGYVSLGLVYNSLERADD--ALQAFNKALELDPHNVFALNALGDLYYGL 154 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 +AI + + N A D GD+ ++ + +E+++L N M Sbjct: 155 GNNDQAIE----AYRKGIALDPNDAAARFNLGDLFYDLGDLESAEKETLEAVRLDPNFTM 210 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + + I Q + +A E K P+ A + + Sbjct: 211 SYLTLGNICIDQERLAEATKYFELYLKKEKSPQAAEMIAEVK 252 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 19/193 (9%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A E+ +A + K E + + +L A+ G + LK Sbjct: 17 EAGEYGKA--SVEFKACTEVEPDNAEGYFYLGEAL--AETGKQAEAIESIKAGLKRAPED 72 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRA 314 I A L + ++A +K+ ++ P + +Y L E L+ Sbjct: 73 IEAWTSLGDILFESGQHKEAIAAYKKVIELRPAEADGYVSLGLVYNSL--ERADDALQAF 130 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--------LAQ 366 + E++ +V +L + + +G+ DQA + + P L Sbjct: 131 NKALELDPHNVFALNALGDLYYGLGNNDQAIEAYRKGIALDPNDAAARFNLGDLFYDLGD 190 Query: 367 IEQANSHNTDKIL 379 +E A + + Sbjct: 191 LESAEKETLEAVR 203 >gi|228996733|ref|ZP_04156370.1| hypothetical protein bmyco0003_13190 [Bacillus mycoides Rock3-17] gi|229004399|ref|ZP_04162155.1| hypothetical protein bmyco0002_13540 [Bacillus mycoides Rock1-4] gi|228756853|gb|EEM06142.1| hypothetical protein bmyco0002_13540 [Bacillus mycoides Rock1-4] gi|228763052|gb|EEM11962.1| hypothetical protein bmyco0003_13190 [Bacillus mycoides Rock3-17] Length = 420 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 90/277 (32%), Gaps = 51/277 (18%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + E ++ ++ ++ + A + +L A+ L Sbjct: 121 QKLLKAKEMMPEEPVITFGLAELYSSKGEEQKAIAYYQSLLSDHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVV------QQYVLAKEWSRAITFLNQKKKN 217 IG+ A Y + L+ D + + W K Sbjct: 180 LSAIGNWEEAITYYEEGLEEQKDIHSLFGYAFTLYQGEEYQRSIGAW-----------KE 228 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 KE + A L + + +G + SY E +K+ + S+ + A K Sbjct: 229 LKELDPEYASLYMYLAKCYEREGMLQESYETLHEGIKIDELSVPLYVELANIAAKIGKLA 288 Query: 278 KAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +AE +L+K +++P H + I Y ++L E E E L++V + Sbjct: 289 EAEELLQKALQIDPGH--LGAILKYAYILKEQ----------------EKYEELIVVVEN 330 Query: 335 ALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 A++ G D A AK L M + + Sbjct: 331 AMDSGEQDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|325116704|emb|CBZ52257.1| putative U5 snRNP-associated 102 kDa protein [Neospora caninum Liverpool] Length = 1114 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 53/343 (15%), Positives = 112/343 (32%), Gaps = 49/343 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 ++A ++ AR +++ + + L L A E ++ A +++ + Sbjct: 614 ALARGSVATARALYTCAI-ERLKTKKSLWLAL----ADLETKHGTAEHLEKLLQKAVLCC 668 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + L + GD+ +A++ +A + + ++ A V+ E+ RA Sbjct: 669 PQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLERENNEFLRARK 727 Query: 210 FLNQKKKN--------------AKEWNRNRAILLIARSLENADKG--------------- 240 L + + + + + + AI L +L+ + Sbjct: 728 ILKRTRAHVNTQKVWMQSVQLERQVGDYDAAIALCEEALQKHPECAKLWMIGGQLHREHP 787 Query: 241 ---DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296 + + +C S+ +CA Q K A ILEK NP +PE+ Sbjct: 788 TKKNDETAAEVFQRGTVVCPRSVPVWLCAVDCQREQGKWSVARAILEKAKLRNPKNPELW 847 Query: 297 NIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + E G + A + E S ++ ++ Q H K Sbjct: 848 HAAIQIEVE--AGNKQMAQHVASKAVQECPSSGLVWAEAIFLEEKSAQTHKAVDALTKCE 905 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396 + L +A++ K W ++ A W + Sbjct: 906 NDVHLVLAVARLFWREGK-ISKARKWLNRSVTLDASFGDAWAA 947 >gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] Length = 412 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 107/293 (36%), Gaps = 32/293 (10%) Query: 118 NEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + +YLL + A E ++ A + + ++I + ++ F +IG+ A Sbjct: 95 DPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNNMAFSYSQIGEYEKAVE 154 Query: 176 YATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 KALD+ PD P W +A+ A + A+ + K + A + Sbjct: 155 AYGKALDLKPDYPNAWYGKAL--NLSQAGRYEEAVDAYDIVLKENSNYKEAWA----GKG 208 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + G+ + ++L++ + A L S ++A EK +++P Sbjct: 209 IALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDPEN 268 Query: 294 EIANIYTHLLSE-NTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + + ++ + + + + + EIN E+ + ++ D+A Sbjct: 269 D--DAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 326 Query: 349 MLAMKIAP-----RKEIFLLLAQIEQANSH----------NTDKILYWTQSAL 386 A+++ P + +LAQ+++ + + W A+ Sbjct: 327 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAV 379 >gi|256830344|ref|YP_003159072.1| hypothetical protein Dbac_2579 [Desulfomicrobium baculatum DSM 4028] gi|256579520|gb|ACU90656.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum DSM 4028] Length = 786 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 9/231 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G + A+ + + P+ + + + + W A + E Sbjct: 35 EEAGRFSEARVEGRNVIKLDPNHVGAHLLLARCALKEQNWREAFGNFQRAV----ELEPA 90 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ GD + A + L L S+ + A +++ + +A L+ Sbjct: 91 NTEALLGVGRLYLLSGDTNQAEAHAGQVLALDPQSVDGLLLRAGAMLRAKRFEEAGRQLD 150 Query: 285 KIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ +P E +A H L + +S + +A +M Sbjct: 151 LVFAKDPANEDALLALSVIHSEQGRNSDALAVIGKGIGKKPDSRPLHFRAASLAADMEDY 210 Query: 342 DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + ++ P + +LLA + + N ++ + L A P Sbjct: 211 AAAEQHLLKLKELDPANRGVQILLAALYERMGQN-GRVEGILRELLAAEPG 260 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 45/393 (11%), Positives = 107/393 (27%), Gaps = 19/393 (4%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF---E 163 + Q + L L + L + + L + + + Sbjct: 280 DALAVAQEGEPSPKL-RLASAAVLLTVGRADEGEAALVALAGDKEAGPAGIEARLRMSEI 338 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 R GD + A + L ++P A + ++L + A+ L +A + Sbjct: 339 KLRRGDRDGALAEVDEVLRLNPADARAHAARGRIFMLQDRFEEALAELRIALHDAPD--- 395 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + + G+ ++ L +++ + A + A +L Sbjct: 396 -DMAVAVLMARAQFALGNTLSGVEALRNFLLKKPDAVPVRLELAAHHQRAGEPDAALAVL 454 Query: 284 EKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P +A E+ + + N+ +L+ + + Sbjct: 455 QGGENGGRMPAQLMLAMGDIEARREHFDAAEIYYRQAAQENEAHAPALLRLGSMHGGRKD 514 Query: 341 IDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399 D A + +P + +E A + + + + DPL G Sbjct: 515 WDAARRTFDELLLASPDAHGGAEGVVAVELAAGRGEAALAWAAERSASRPSDPLAADLQG 574 Query: 400 YLSSVWLPLSPISKTL-----CYFEWKIPTK--SPEYISSENINFSLEMAYPADDLQSML 452 + + K EW +P+ + Y S+ + ++ A Sbjct: 575 RTALRLGNVDEAEKAFREAQRRAPEWSVPSARLAGLYASTGRKDTAVAECRAALAKNPDS 634 Query: 453 NNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPD 485 ++ ++ R PD Sbjct: 635 VPEGLLLGQLLQLGGETAEAEAIFRKLLARHPD 667 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 87/290 (30%), Gaps = 16/290 (5%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 A + +Q++ H L+ L + + ++ A + +L + Sbjct: 483 AAEIYYRQAAQENEAHAPALLRLGSMHGGR--KDWDAARRTFDELLLASPDAHGGAEGVV 540 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 G +A +A + P P + + + A + ++ A EW Sbjct: 541 AVELAAGRGEAALAWAAERSASRPSDPLAADLQGRTALRLGNVDEAEKAFREAQRRAPEW 600 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A L + G + + +L +S+ + + L + +AE Sbjct: 601 SVPSARLAGLYAS----TGRKDTAVAECRAALAKNPDSVPEGLLLGQLLQLGGETAEAEA 656 Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSEN-TVGKLKRALRLEEINK--ESVESLVIVSK 333 I K + HP++ Y + + T +L AL L +L V Sbjct: 657 IFRK--LLARHPDLLPAANNLAYLLVSHDAPTTEQLSEALALATRASAGGDPSALDTVGW 714 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 + +G D A A + P A+ T + Sbjct: 715 VHYRLGDKDAALQFLRKAHESLPEDPAVTYHLARVLADLGQTGEARELLT 764 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 58/206 (28%), Gaps = 19/206 (9%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--- 149 ++ LA S+ ++ L L+ + AL + A + + Sbjct: 544 LAAGRGEAALAWAAERSASR----PSDPLAADLQGRTALRLGNVDEAEKAFREAQRRAPE 599 Query: 150 ---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 P+ R +Y G ++A AL +PD+ + Q L E + Sbjct: 600 WSVPSARLAGLY------ASTGRKDTAVAECRAALAKNPDSVPEGLLLGQLLQLGGETAE 653 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI-C 265 A + + A +A L + D + + +++ Sbjct: 654 AEAIFRKLLARHPDL--LPAANNLAYLLVSHDAPTTEQLSEALALATRASAGGDPSALDT 711 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291 K A L K + P Sbjct: 712 VGWVHYRLGDKDAALQFLRKAHESLP 737 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 3/146 (2%) Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A L+ + G + + +KL N + A + A+ + + R+A ++ ++ Sbjct: 29 ANGLKFEEAGRFSEARVEGRNVIKLDPNHVGAHLLLARCALKEQNWREAFGNFQRAVELE 88 Query: 291 PH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P + +LLS +T A ++ ++ +SV+ L++ + L ++A + Sbjct: 89 PANTEALLGVGRLYLLSGDTNQAEAHAGQVLALDPQSVDGLLLRAGAMLRAKRFEEAGRQ 148 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSH 373 L P E LL + + Sbjct: 149 LDLVFAKDPANEDALLALSVIHSEQG 174 >gi|253688744|ref|YP_003017934.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755322|gb|ACT13398.1| Tetratricopeptide TPR_2 repeat protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 389 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 15/243 (6%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + + + R AV L + G + A+ + +D Sbjct: 83 GEVDRAIRIHQALTESASLTFEQRLLAVQQLGRDYMAAGLYDRAEESFNQLVDEEDFRRS 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++Q Y +W AI + K K+ R A +L D+ + Sbjct: 143 ALQQLLQIYQATSDWPAAIDAAEKLVKMGKDQLRVDIAHFYCELALLAMGSDDLDKALTL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIANIYTHL 302 + + ASI + ++Q +A L K P + Y HL Sbjct: 203 LKKGAAADNQCARASIMMGRIYMAQQDYSRAVEALRQVLDQDKELVSETLPMLQECYQHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF- 361 + + R E N + + ++++ I + A A ++ P +F Sbjct: 263 --DKPLDWENFLKRCVEENTGAT-AELMLADILEREEGAEVAQAYINRQLQRHPTMRVFH 319 Query: 362 LLL 364 L+ Sbjct: 320 RLM 322 >gi|15606922|ref|NP_214303.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5] gi|2984175|gb|AAC07708.1| hypothetical protein aq_1896 [Aquifex aeolicus VF5] Length = 342 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 8/157 (5%) Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSL-YFESCRIGDLNSAQRYATKALDISP 185 A A R Y+ A + + P R + L Y E+ + A+ KAL I+P Sbjct: 34 AAFAARNYSEAIANFHKALRANPDEPRIWNALGLAYMEAK---EYKKAEESFKKALSINP 90 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + Y + A+ +L + + ++ A + K D+ Sbjct: 91 NYSEARKNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEA--FYYLAKVYEAKQDLKNY 148 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +++ N + A + A++ + K +AE I Sbjct: 149 VRYLEKAVAYNPNFVQAQLELAQAYENLGKYEEAEKI 185 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 53/154 (34%), Gaps = 13/154 (8%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A+ +S AI ++ + + R + A L + + + ++L + N Sbjct: 37 AARNYSEAIANFHKALRANPDEPR----IWNALGLAYMEAKEYKKAEESFKKALSINPNY 92 Query: 260 IMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPE---IANIYTHLLSENTVGKLK 312 A + +A L++ + H +A +Y ++ ++ Sbjct: 93 SEARKNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEAFYYLAKVYEA--KQDLKNYVR 150 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + N V++ + +++ +G ++A Sbjct: 151 YLEKAVAYNPNFVQAQLELAQAYENLGKYEEAEK 184 >gi|5052534|gb|AAD38597.1|AF145622_1 BcDNA.GH04245 [Drosophila melanogaster] Length = 1011 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 271 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 330 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + N A L + ++G + + +++L++ Sbjct: 331 ALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKREQGYIEEATRLYLKALEVF 386 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 + A A L Q K ++A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 387 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 444 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 445 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 490 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 37/306 (12%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY---- 120 L + GY L L++ AR M S V Sbjct: 136 EALDNYRRAVRLKPDFIDGYINLAAALVA--------ARDMESAVQAYITALQYNPDLYC 187 Query: 121 ----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L LL+ + A ++ A +L G++ A + Sbjct: 188 VRSDLGNLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHH 242 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 KA+ + P+ + A+ + RA+ + + N A++ + Sbjct: 243 FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 298 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEI 295 ++G + + +++L N A A +L + + ++AE ++ + H + Sbjct: 299 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS 358 Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 N ++ E +L LE + + ++ + + G + +A A Sbjct: 359 LNNLANIKREQGYIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEA 416 Query: 352 MKIAPR 357 ++I P Sbjct: 417 IRIQPT 422 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + + H + L L I + A L++ A Sbjct: 336 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPDFAAAH 393 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I P + ++ S A+ + + Sbjct: 394 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 453 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 454 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502 >gi|17647755|ref|NP_523620.1| super sex combs, isoform B [Drosophila melanogaster] gi|24585827|ref|NP_724406.1| super sex combs, isoform A [Drosophila melanogaster] gi|24585829|ref|NP_724407.1| super sex combs, isoform C [Drosophila melanogaster] gi|6942068|gb|AAF32311.1|AF217788_1 O-glycosyltransferase [Drosophila melanogaster] gi|7302245|gb|AAF57338.1| super sex combs, isoform B [Drosophila melanogaster] gi|10728167|gb|AAG22338.1| super sex combs, isoform A [Drosophila melanogaster] gi|10728168|gb|AAG22339.1| super sex combs, isoform C [Drosophila melanogaster] gi|189182206|gb|ACD81879.1| SD06381p [Drosophila melanogaster] Length = 1059 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 271 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 330 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + N A L + ++G + + +++L++ Sbjct: 331 ALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKREQGYIEEATRLYLKALEVF 386 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 + A A L Q K ++A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 387 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 444 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 445 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 490 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 97/306 (31%), Gaps = 37/306 (12%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY---- 120 L + GY L L++ AR M S V Sbjct: 136 EALDNYRRAVRLKPDFIDGYINLAAALVA--------ARDMESAVQAYITALQYNPDLYC 187 Query: 121 ----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L LL+ + A ++ A +L G++ A + Sbjct: 188 VRSDLGNLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHH 242 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 KA+ + P+ + A+ + RA+ + + N A++ + Sbjct: 243 FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 298 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEI 295 ++G + + +++L N A A +L + + ++AE ++ + H + Sbjct: 299 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADS 358 Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 N ++ E +L LE + + ++ + + G + +A A Sbjct: 359 LNNLANIKREQGYIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEA 416 Query: 352 MKIAPR 357 ++I P Sbjct: 417 IRIQPT 422 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + + H + L L I + A L++ A Sbjct: 336 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPDFAAAH 393 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I P + ++ S A+ + + Sbjct: 394 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 453 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 454 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 502 >gi|323179519|gb|EFZ65086.1| cellulose synthase operon protein C [Escherichia coli 1180] Length = 1157 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|253702418|ref|YP_003023607.1| hypothetical protein GM21_3832 [Geobacter sp. M21] gi|251777268|gb|ACT19849.1| TPR repeat-containing protein [Geobacter sp. M21] Length = 688 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 20/188 (10%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD------- 238 D+PW + + A EW + + + L A + A+ Sbjct: 115 DSPWYPTLRLFRQRQAGEWEEVVARVKEALAREASPASVSPQALHADARGEAEIWNNRGC 174 Query: 239 ----KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--- 291 G + + E++ L + + A SL + + +A ++P Sbjct: 175 AEAAAGRHLEAVESYREAIALAPDLMPAHYNLGNSLYALGRIAEAAESYRWALALDPALP 234 Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 H + + + L+RALR+ + +E+ ++ E G +D+A A Sbjct: 235 QGWHNLSLALKAQGALDEALHALRRALRIA---PDYLEARHTQGELHHERGELDEAQACF 291 Query: 349 MLAMKIAP 356 + P Sbjct: 292 RENLSRDP 299 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 55/198 (27%), Gaps = 15/198 (7%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G AA A + + L A + A E L + Sbjct: 172 RGCAEAAAGRHLEAVESYREAIALAPDLMPAHYNL--GNSLYALGRIAEAAESYRWALAL 229 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 ++L G L+ A +AL I+PD + + E A Sbjct: 230 DPALPQGWHNLSLALKAQGALDEALHALRRALRIAPDYLEARHTQGELHHERGELDEAQA 289 Query: 210 FLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + A+ + + ++ + ++L L + + Sbjct: 290 CFRENLSRDPGYLPSWNALGISLQLQGLLEE-----AVDCYQKALALKPDYL-------H 337 Query: 269 SLISQNKKRKAEVILEKI 286 +L + ++ +LE+ Sbjct: 338 ALNNLGTASRSLGLLEQA 355 >gi|313680431|ref|YP_004058170.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus profundus DSM 14977] gi|313153146|gb|ADR36997.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus profundus DSM 14977] Length = 362 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 85/262 (32%), Gaps = 31/262 (11%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-----QIPATREFAVYSLYFESCRIG 168 +E V+ + QI + A + + L PA A+ +L F + + G Sbjct: 61 KLEPDEPEVWRVLAQIYTTTGWWIRAEKAWKRYLVLAGESNPAPLAEALRALGFLAYQRG 120 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE-------WSRA-------ITFLNQK 214 D+ +A Y +AL + P++ + + Y+ + W A + Sbjct: 121 DVKAALDYFEQALVLEPESEEALAWLGRIYLELGDGIRAAEYWRLAAKVNPSPRNTYFAE 180 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + A+ + + GD + + L + A A+S + Sbjct: 181 QAEKMAQYGSEAVKAFYQGYAAWEAGDYPTAIQQFETAAGLAPDWSEAHRWLARSYMDAG 240 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +A EK+ + +P A + L E L A + Sbjct: 241 MPARAIPHWEKVIALEGNPADARHFLKLAREAAGVGLSAADAFFK------------GVA 288 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 A E G +++A A++ P Sbjct: 289 AYEAGRLEEAEHWFARAVEADP 310 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 76/251 (30%), Gaps = 41/251 (16%) Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKG 240 + PD P V + Q Y W RA + A E N A L A +G Sbjct: 61 KLEPDEPEVWRVLAQIYTTTGWWIRAEKAWKRYLVLAGESNPAPLAEALRALGFLAYQRG 120 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------- 293 D+ A+ ++L L S A + + +A KVNP P Sbjct: 121 DVKAALDYFEQALVLEPESEEALAWLGRIYLELGDGIRAAEYWRLAAKVNPSPRNTYFAE 180 Query: 294 --------------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 Y + + +++ + + E+ +++ ++ G Sbjct: 181 QAEKMAQYGSEAVKAFYQGYAAWEAGDYPTAIQQFETAAGLAPDWSEAHRWLARSYMDAG 240 Query: 340 SIDQAHAKAML--AMKIAP-RKEIFLLLAQIEQA----------------NSHNTDKILY 380 +A A++ P FL LA+ + ++ + Sbjct: 241 MPARAIPHWEKVIALEGNPADARHFLKLAREAAGVGLSAADAFFKGVAAYEAGRLEEAEH 300 Query: 381 WTQSALHAMPD 391 W A+ A P+ Sbjct: 301 WFARAVEADPE 311 >gi|108758601|ref|YP_633027.1| adventurous gliding motility protein AglT [Myxococcus xanthus DK 1622] gi|108462481|gb|ABF87666.1| adventurous gliding motility protein AglT [Myxococcus xanthus DK 1622] Length = 478 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 7/224 (3%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y K + L+ A Y+L + R G L A+ + AL P +E + Sbjct: 75 DYPSLERKFQSALEADGNLAEADYNLGVLAERQGKLTEARNHYKTALTKKPSLRQASENL 134 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 A + A+ + + + ++RA L + +GD + +L Sbjct: 135 AVMEQNAGNVAGAVALYQEVLQRYPDDAQSRARL----AEIFRQQGDHTKAMDLTRAALM 190 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPEI--ANIYTHLLSENTVGKL 311 S A +S + + + A+++ L + PE+ A L + Sbjct: 191 RDPQSTTALKVMIRSYLDRKQLAMAKLVALRGVKLDAADPELHHAVGLILLQEGDVDDAR 250 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + E+ ++ V S V ++++AL + A ++ Sbjct: 251 LSFKKALEVREDYVPSHVELAQLALAAENYPTAEQHLRRILQAD 294 >gi|323944499|gb|EGB40571.1| cellulose synthase operon protein C [Escherichia coli H120] Length = 1157 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 105/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + +M + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVMET---ANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|323526980|ref|YP_004229133.1| tetratricopeptide repeat-containing protein [Burkholderia sp. CCGE1001] gi|323383982|gb|ADX56073.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp. CCGE1001] Length = 627 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 30/276 (10%), Positives = 77/276 (27%), Gaps = 12/276 (4%) Query: 72 LFHMLHKRNYDKGYKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 + ++ R D + L L ++ + +A+ ++ + + Sbjct: 70 VRRAVNLRPQDAALQLNLGNALKALGQIDEAIAQFRNALTLAPSF----PMAHYNLGNAY 125 Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A ++ A + L++ + +L +G A + L++ P Sbjct: 126 AAAGRHEDAADAFRRSLRLQPDDASSHNNLGNALHALGRHEEAIASFRRTLELRPGHAGA 185 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + AI + + G + Sbjct: 186 LNNMGMSLNALGRADEAIPCFEAALAAEPRF----VAAHFNLANTFDATGRHAQAVASFE 241 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENT 307 +L L N A +L + + +A LE+ ++P +A + H Sbjct: 242 AALALQPNLPPAIFGMGNALAALGRHTEAIPYLERSVGLDPQFALAWLCLGSAHQGLGAH 301 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 L+ + + + + + + L +G + Sbjct: 302 ATALRAFDQALRLQPDLASAHMNRALAWLALGDFAR 337 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 6/157 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A E L A ++L G A AL + P+ P Sbjct: 197 GRADEAIPCFEAALAAEPRFVAAHFNLANTFDATGRHAQAVASFEAALALQPNLPPAIFG 256 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI +L + + A L + + + G + ++L Sbjct: 257 MGNALAALGRHTEAIPYLERSV--GLDPQFALAWLCLGSAHQGL--GAHATALRAFDQAL 312 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 +L + A + A + ++ + + E W++ Sbjct: 313 RLQPDLASAHMNRALAWLALGDFARG--LPEYEWRLQ 347 >gi|228990635|ref|ZP_04150600.1| hypothetical protein bpmyx0001_13970 [Bacillus pseudomycoides DSM 12442] gi|228769161|gb|EEM17759.1| hypothetical protein bpmyx0001_13970 [Bacillus pseudomycoides DSM 12442] Length = 420 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 88/275 (32%), Gaps = 47/275 (17%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + E ++ ++ ++ + A + +L A+ L Sbjct: 121 QKLLKAKEMMPEEPVITFGLAELYSSKGEEQKAIAYYQSLLSDHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVV------QQYVLAKEWSRAITFLNQKKKN 217 IG+ A Y + L+ D + + W K Sbjct: 180 LSAIGNWEEAITYYEEGLEEQKDIHSLFGYAFTLYQGEEYQRSIGAW-----------KE 228 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 KE + A L + + +G + SY E +K+ + S+ + A K Sbjct: 229 LKELDPEYASLYMYLAKCYEKEGMLQESYETLHEGIKIDELSVPLYVELANIAAKIGKLA 288 Query: 278 KAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +AE +L+K +++P H Y ++L E E E L++V + A+ Sbjct: 289 EAEELLQKALQIDPGHLGTILKYAYILKEQ----------------EKYEELIVVVENAM 332 Query: 337 EMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 + G D A AK L M + + Sbjct: 333 DSGEQDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|189426401|ref|YP_001953578.1| hypothetical protein Glov_3352 [Geobacter lovleyi SZ] gi|189422660|gb|ACD97058.1| TPR repeat-containing protein [Geobacter lovleyi SZ] Length = 404 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 53/176 (30%), Gaps = 18/176 (10%) Query: 118 NEYLVYLLEVQ--IALAERQYNIAHEKLEMMLQIPATR------EFAVYSLYFESCRIGD 169 L Q + A + +M L++ T+ VY G Sbjct: 57 QPDLTEAYTYQGDAYARLGKRKEAIDAYKMSLKVDKTQDTVYTTLAGVY------IDNGQ 110 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A++ + + + Q +++ A ++ E Sbjct: 111 KSEAEKVLKDGIKQNNQNTLAYYMLGQLQAQNGDYTSAEANF--RQVIKLEPKDGNGYYA 168 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +L +K D + ++ L + A + ++ +K KA+ I++ Sbjct: 169 LGMALNGQEKYD--EAVEALQKATDLKADFSPALLELGRAYAGLGEKDKAQEIVDT 222 >gi|325916180|ref|ZP_08178464.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC 35937] gi|325537600|gb|EGD09312.1| Tfp pilus assembly protein PilF [Xanthomonas vesicatoria ATCC 35937] Length = 690 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 67/222 (30%), Gaps = 10/222 (4%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKE 220 ++ R + A A + +PD + + + A+ + ++ Sbjct: 6 LQALRRNAADDAVALAREWASTAPDNAAAHRWLGLSLQQQGQPALALASIETALALTPED 65 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + + + + N D S A L N A + A +++ AE Sbjct: 66 ADLHLLRAGLLLATRNLSAADAALSRSTA-----LDPNQFNAYVMQAHLAVARGDLDDAE 120 Query: 281 VILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + ++ P HP++ + L + L R E + + + L+ Sbjct: 121 RLSRTAARLAPEHPQLLAVDGVVELRRGQSDRALSLLTRAAEQLPDDPRVMFALGFAYLQ 180 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378 A +++ P +AQ+ Q D + Sbjct: 181 KEHFAFAERAFERVVELNPPGTALRAFIAQLAQRQGRLDDAV 222 >gi|86141096|ref|ZP_01059655.1| hypothetical protein MED217_18130 [Leeuwenhoekiella blandensis MED217] gi|85833038|gb|EAQ51487.1| hypothetical protein MED217_18130 [Leeuwenhoekiella blandensis MED217] Length = 448 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 70/207 (33%), Gaps = 25/207 (12%) Query: 160 LYFESCRIGDLNSAQRYAT----KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 LYFE + + A KAL + P+ + EA+ + Y +++ +AI + Sbjct: 76 LYFEKAKNLAALGQVQEAENNYLKALQLKPNQRDIMEALYEVYYARQDFEKAIDLVQDLA 135 Query: 216 KNAKEWNRNRAIL-----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K + + A + +++ D+ D ++ A + Sbjct: 136 KFDIRYKEDLARIYVRQGAFEKAIAVLDELDEALGKDAYRNQIREQ-----ALALSGGDY 190 Query: 271 ISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVES 327 L NP E + IY + T + A +L +IN + E Sbjct: 191 QE--------KRLLSAIAENPQNEKNYLNLIYVYSEQGKTQQAYQTAQKLLKINPNADEV 242 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + K LE ++QA MK Sbjct: 243 HLALYKFNLEQKEVEQAFKSLERVMKS 269 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 18/187 (9%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDL 170 + + Q L + + P + +Y E G Sbjct: 166 DEALGKDAYRNQIREQALALSGGDYQEKRLLSAIAENPQNEKNYLNLIYVYSE---QGKT 222 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAIL- 228 A + A K L I+P+A V A+ + + KE +A L + K++K E ++L Sbjct: 223 QQAYQTAQKLLKINPNADEVHLALYKFNLEQKEVEQAFKSLERVMKSSKIEAKAKHSVLN 282 Query: 229 ----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + R+ E + + + E+ + + + N K KA E Sbjct: 283 DFLIFVDRNPEYEPELEQAIALFSETEATDVNEEL-------GAYYLKNNDKTKALSYYE 335 Query: 285 KIWKVNP 291 ++ NP Sbjct: 336 AAYQKNP 342 >gi|300865159|ref|ZP_07109983.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506] gi|300336849|emb|CBN55133.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506] Length = 1093 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 70/232 (30%), Gaps = 31/232 (13%) Query: 131 LAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAP 188 E + A + P + E+ ++G + A A+++ PD Sbjct: 11 QEEGKLEDAIAAYCRAIELNPDISW--YHHHLGEALSKLGRCDEASIAFRHAIELKPDFA 68 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W + +EW +I + + E + L + + + + Sbjct: 69 WSYHHLGDALAQQQEWEESIAAFRKAIELNPEHFGSYVGLGNSLAK--------LGQLDE 120 Query: 249 AIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 AI + + + I A L K + H ++ Sbjct: 121 AIAAYRRASELNPDAEWIHYA---------------LAKALQQRTHSDVVEAIASYRQMI 165 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E ++ L ++ ++ E + + ++ G +++A A ++ P Sbjct: 166 ELNPDNVEAYQNLLQLQSDNWELWLQLGNTLVQQGKLEEAIAAYRRLIEHNP 217 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 9/172 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G L A +A++++PD W + + A + ++ Sbjct: 8 KQLQEEGKLEDAIAAYCRAIELNPDISWYHHHLGEALSKLGRCDEASIAFRHAIELKPDF 67 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L A + + + + IA++ AIE L + + SL + +A Sbjct: 68 AWSYHHLGDALA-QQQEWEESIAAFRKAIE---LNPEHFGSYVGLGNSLAKLGQLDEAIA 123 Query: 282 ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + ++NP H +A + V + ++ E+N ++VE+ Sbjct: 124 AYRRASELNPDAEWIHYALAKALQQRTHSDVVEAIASYRQMIELNPDNVEAY 175 >gi|229043364|ref|ZP_04191081.1| hypothetical protein bcere0027_14130 [Bacillus cereus AH676] gi|228725945|gb|EEL77185.1| hypothetical protein bcere0027_14130 [Bacillus cereus AH676] Length = 434 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ +AI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQKAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|119505623|ref|ZP_01627694.1| TPR domain protein [marine gamma proteobacterium HTCC2080] gi|119458566|gb|EAW39670.1| TPR domain protein [marine gamma proteobacterium HTCC2080] Length = 604 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 76/244 (31%), Gaps = 10/244 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q + + A + +L T A+ + +G ++ A Y +P+ Sbjct: 149 AQASQQLGEQEQALGLFQSVLDGDPTNTVALNGMGISLKTLGYIDDAVNYLQAGAQQAPE 208 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 +P + + A A+ ++ + + L + SY Sbjct: 209 SPELYTNLASALAQADREDEAVAAYSRALELSPYDVDLHDWFNGY--LGVIAHPQYLDSY 266 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLL 303 A+E +++ + A+ L+ + +A+ +LE P E Y + Sbjct: 267 RGALEQQ---PDNVGLATALARKLLLSGRGPEAQSVLEAARSAGGDRPSLETDLSYVYRE 323 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS-IDQAHAKAMLAMKIAP-RKEIF 361 L A + + + ++ + G +A ++ P + ++ Sbjct: 324 QGFFSEALVSARSAARLAPQHPDVQRELATALMASGEGYGEALEILDTLLRSYPVDQGLW 383 Query: 362 LLLA 365 L A Sbjct: 384 ALCA 387 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 25/203 (12%), Positives = 62/203 (30%), Gaps = 36/203 (17%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + + G A D+ A + + + + + A Sbjct: 13 LAAQKLKAGAPEEALAVLEPQRDLCAHAADFWQLLALAHKGMGDSAAAEAAFTSSIAIDP 72 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + + + RSL A+ + ++L L + + A I A++L+ N+ A Sbjct: 73 QPHVLTNLANLHRSLRQAE-----TALAYYDQALALAPDHLPAQINRARALLDLNRYSDA 127 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +L + + N + + + +++ + ++G Sbjct: 128 ------------------------------RLA-FQTILQANPDHRNATLGLAQASQQLG 156 Query: 340 SIDQAHAKAMLAMKIAPRKEIFL 362 +QA + P + L Sbjct: 157 EQEQALGLFQSVLDGDPTNTVAL 179 >gi|302878329|ref|YP_003846893.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella capsiferriformans ES-2] gi|302581118|gb|ADL55129.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella capsiferriformans ES-2] Length = 1646 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 84/283 (29%), Gaps = 15/283 (5%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 Y Y L LM+ A + A K + + + L I + A Sbjct: 266 RYAAAYSNLANTLMASA--ELAEAEKCCRRALEINPGAADAHSTL--GHIFEKQGDLAAA 321 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LQI + L G L+ A +AL PD + Sbjct: 322 EASFRRALQINPDSAADLSHLGSVLKAQGRLDEADICYRRALQFKPDYADAHYNLATLLK 381 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A Q + ++ + + + + E+++L + Sbjct: 382 EQGRPDEAENSYRQALRFNPDF----VYAYYNVANVLLSQSRLTEAESGYREAIRLKPDF 437 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRA 314 A L + + +AE + ++ P+ A +++L + ++ Sbjct: 438 AEAHNNLGIVLRALGRPAEAEASYLEAIRIQ--PDYAEAHSNLGITLHELGRSSDAVRSI 495 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + I+ E+ + + L +G +A A A++ P Sbjct: 496 NQALLISPMLAEAHCNLGNVLLGLGRQAEAQASYRRALQCDPD 538 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 78/229 (34%), Gaps = 11/229 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A +QI A +L +L A++ +AL+I+P A Sbjct: 248 GRASEAEACYRRAIQINPRYAAAYSNLANTLMASAELAEAEKCCRRALEINPGAADAHST 307 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + + A + + + A L +G + + +L Sbjct: 308 LGHIFEKQGDLAAAEASFRRALQINPDS----AADLSHLGSVLKAQGRLDEADICYRRAL 363 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLK 312 + + A A L Q + +AE + + N P+ Y ++ + + +L Sbjct: 364 QFKPDYADAHYNLATLLKEQGRPDEAENSYRQALRFN--PDFVYAYYNVANVLLSQSRLT 421 Query: 313 RALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 A + + E+ + + +G +A A + A++I P Sbjct: 422 EAESGYREAIRLKPDFAEAHNNLGIVLRALGRPAEAEASYLEAIRIQPD 470 >gi|218665177|ref|YP_002427136.1| TPR domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517390|gb|ACK77976.1| TPR domain protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 603 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 110/391 (28%), Gaps = 39/391 (9%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYA 177 E L YLL + A +RQ +A + ++ ++ GD A + A Sbjct: 83 EQLYYLLVAEFATVQRQPQLAIPAWQKAAKLAPEPNVLRR--ATQAIARFGDFQDALQLA 140 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + +P + + + + +A+ L + + + + + Sbjct: 141 RRWRQAAPGSAEADQFEAALLLTTGQDEQALQLLQATLARFPDDPK----VTLQFAELLV 196 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292 G + S A + + + + A LEK + P Sbjct: 197 THGRSGEARRLLSALADKDPKSAAAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAA 256 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +A + L+ + E+ + ++ + L+MG + QA+ Sbjct: 257 ISLAEALQAVQG--PAAALRSIQSFTASHPEATLARQYLAALYLQMGGLTQAYRLYQDMA 314 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYL---SSVWLPL 408 + P LL + + + + A + A P+ + G L W Sbjct: 315 RQNPDDPDILLSLGLMDIDRKDWKRAESVLLRARNLAPQSPVPVYYLGRLYEAQDRWA-- 372 Query: 409 SPISKTLCYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 +W S P Y + E + +E D P ++ Sbjct: 373 -------EALQWYQRIHSGPLYPAVELRSARVEYLLGHHDKAIDKLRALAAAHPQDAQIP 425 Query: 468 SFEDSTIHPL-----------DPHIRQPDDP 487 E + D R P+ P Sbjct: 426 LLEAGLLQDSGHLPQALQVINDALQRMPEQP 456 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 90/301 (29%), Gaps = 44/301 (14%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A ++ + F ++ V L ++ + + A L + Sbjct: 162 LTTGQDEQALQLLQATLAR--FPDDPKVTLQFAELLVTHGRSGEARRLLSALADKDPKSA 219 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A Y+L A + KAL I PD ++ + + + A+ + Sbjct: 220 AAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAAISLAEALQAVQGPAAALRSIQSF 279 Query: 215 KKNAKEWNRNRAIL------------------------------LIARSLENADKGDMIA 244 + E R L L++ L + D+ D Sbjct: 280 TASHPEATLARQYLAALYLQMGGLTQAYRLYQDMARQNPDDPDILLSLGLMDIDRKDWKR 339 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-------KVNPHPEIAN 297 + + + L S + + +Q++ +A W + P E+ + Sbjct: 340 AESVLLRARNLAPQSPVPVYYLGRLYEAQDRWAEALQ-----WYQRIHSGPLYPAVELRS 394 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L + + + L + + + ++ + + + G + QA A++ P Sbjct: 395 ARVEYLLGHHDKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPE 454 Query: 358 K 358 + Sbjct: 455 Q 455 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 76/275 (27%), Gaps = 14/275 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L A+ + M + L D A+ +A + Sbjct: 293 LAALYLQMGG-LTQAYRLYQDMARQNPDDPDILLSLGLMD--IDRKDWKRAESVLLRARN 349 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P +P + + Y W+ A+ Q+ + + + + + G Sbjct: 350 LAPQSPVPVYYLGRLYEAQDRWAEALQ-WYQRIHSGPLYP----AVELRSARVEYLLGHH 404 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + + A L +A ++ + P P + Sbjct: 405 DKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPEQPSLWYAQGA 464 Query: 302 LLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAPRK 358 + + + K + + ++ + +E + +A A+ ++P Sbjct: 465 IYEQLKDYPAMEKAMRTVIHLAPNHAQAYNFIGYSLVERHSDLAEAQKLLTKALSLSPDN 524 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 L + D+ L + Q A A+PD Sbjct: 525 PEILDSVGWLYHARGDNDRALGYLQRAHAALPDEA 559 >gi|56963669|ref|YP_175400.1| hypothetical protein ABC1904 [Bacillus clausii KSM-K16] gi|56909912|dbj|BAD64439.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 427 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 69/187 (36%), Gaps = 19/187 (10%) Query: 127 VQIALAERQYNIAHEKLEM-MLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + AE++Y A E L M A A LY + D A++Y +A+ Sbjct: 252 ARAYEAEKRYEEAFETLAAGMRMDEFNDALPLLAGKLLYKQ----QDFVGAEQYLRQAIA 307 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P + + + + + + +AK + A+L+ +L + + Sbjct: 308 LNPTNTEALQTLAAFLREQERFDELLELVE----HAKSYGETDALLVWYEALAHKELEYY 363 Query: 243 IASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANI 298 + E + + + L+ + ++ KA + +K + +P +++ + Sbjct: 364 ETAREKYKEAYIAFHEDADFLSE---YGHFLLEEGERNKAVELFQKALQQSPERSDLSEL 420 Query: 299 YTHLLSE 305 L +E Sbjct: 421 LDELQAE 427 >gi|324502359|gb|ADY41039.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Ascaris suum] Length = 1100 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 102/284 (35%), Gaps = 25/284 (8%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEVQIALAERQYNI 138 GY L L++ ++ A + +Y+S + L LL+ + Sbjct: 170 GYINLAAALVA--GGDLEQA--VSAYLSALQYNPDLYCVRSDLGNLLKAM-----GRLEE 220 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A ++ A +L G++ A + KA+ + P+ + Sbjct: 221 AKVCYLKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVL 280 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ + RA+ + A N A++ + ++G + + ++++L N Sbjct: 281 KEARIFDRAVAAYLRALNLAG----NHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPN 336 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317 A A +L + +AE + P H + N ++ E GK++ A RL Sbjct: 337 FPDAYCNLANALKEKGLVEEAEKAYNTALALCPTHADSQNNLANIKRE--QGKIEEATRL 394 Query: 318 E----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 EI E + ++ I + G + A A++IAP Sbjct: 395 YLKALEIYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT 438 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 19/208 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A K ++ H + L I + + A L+I A Sbjct: 352 GLVEEAEKAYNTALALCPTHADSQNNL--ANIKREQGKIEEATRLYLKALEIYPEFAAAH 409 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I+P + + A+ + + Sbjct: 410 SNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCYTRAIQI 469 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI------ 271 + A + + D G++ + +LKL + A A L Sbjct: 470 NPGF----ADAHSNLASIHKDSGNIPEAIQSYSTALKLKPDFPDAFCNLAHCLQIICDWT 525 Query: 272 -SQNKKRKAEVILEKIWK------VNPH 292 N+ RK I+E+ + V+PH Sbjct: 526 DYDNRMRKLVAIVEEQLEKKRLPSVHPH 553 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 79/226 (34%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A KA+++ P+ P + Sbjct: 287 DRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLAN 346 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 A N ++ L + ++G + + +++L++ Sbjct: 347 ALKEKGLVEEAEKAYNTALALCPTHADSQNNL----ANIKREQGKIEEATRLYLKALEIY 402 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K + A ++ ++ P A+ Y+++ + + G L Sbjct: 403 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT--FADAYSNMGNTLKEMGDIGGAL 460 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 461 QCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYSTALKLKPD 506 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ + N +V+ + + ++A + +++ A +L Sbjct: 288 RAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIELQPNFPDAYCNLANA 347 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A++ AL + P + + A + + E+ Sbjct: 348 LKEKGLVEEAEKAYNTALALCPTHADSQNNLANIKREQGKIEEATRLYLKALEIYPEF-- 405 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + + E++++ A +L A Sbjct: 406 --AAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDIGGALQCY 463 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N ++ ++ + ++ ++ Sbjct: 464 TRAIQINPGFADAHSNLASI--HKDSGNIPEAIQSYSTALKLKPDFPDAFCNLA 515 >gi|302340757|ref|YP_003805963.1| hypothetical protein Spirs_4296 [Spirochaeta smaragdinae DSM 11293] gi|301637942|gb|ADK83369.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM 11293] Length = 463 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 42/333 (12%), Positives = 104/333 (31%), Gaps = 46/333 (13%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y+++ + L++ A + ++ + + LL + ++ + + A E L+ Sbjct: 40 YESISSLLVA---GKPEEA--LEAFEKAYANDPDSFETALLRSGLLVSIGKTDEAKEALK 94 Query: 145 MMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 L+ P + G+ N + ++ +PD A+ + Y+ Sbjct: 95 TALEKEPDNPDALFTG----ALIAGLDGERNQEKALLESVVEKAPDHGRALAALGELYME 150 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAI--LLIARSLENADK------------------- 239 KE+ +A + + + RA L+ R + + Sbjct: 151 DKEYDKAEDSFEKSIEAEPDNFVARAGYGNLLLRQKKYEESVEQLDKAVEAFPNYPFSYV 210 Query: 240 ---------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 GD + D ++++L I K + + + +A+ K++ Sbjct: 211 DRGKAKAGLGDTQDAITDLSKAIELDPEHYWHYIDRGKLYLYRGEIERAKADFTSAKKID 270 Query: 291 PHPEIANIYTHLLSENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P ++ +Y ++ + G L E + + + A A Sbjct: 271 PDYFLSYVYLAGINSDEKNWSGALANYKATMERRPDYYYAYEPAATAAFLSEDYTWAAEM 330 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 A + P + + L+ I + + Sbjct: 331 YQKAYENEPDEHGYALMHGISLFEAGKEQEAKA 363 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 46/116 (39%), Gaps = 3/116 (2%) Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++AE ++ ++ P+ I+++ E L+ + + +S E+ ++ S + Sbjct: 24 TKEAEKAVQPEVEIPPYESISSLLVAGKPEEA---LEAFEKAYANDPDSFETALLRSGLL 80 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + +G D+A A++ P L + ++ +S + PD Sbjct: 81 VSIGKTDEAKEALKTALEKEPDNPDALFTGALIAGLDGERNQEKALLESVVEKAPD 136 >gi|294507615|ref|YP_003571673.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] gi|294343942|emb|CBH24720.1| Conserved hypothetical protein containing TPR domain [Salinibacter ruber M8] Length = 681 Score = 52.2 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 88/320 (27%), Gaps = 45/320 (14%) Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQ 135 R Y A + A+ A+ + + H L+ ++ A + Sbjct: 386 RRARSMYDA------ATASSPPDTAQLRAAAGVLRDVLHQSPDTEAALSLQAELYQAWGR 439 Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A +E +L P V R A A + + P + Sbjct: 440 PEEAGRAMERLLDLTPRAPGRWVR-TAQTYQRAHLYARAAGVAEEGFLLFPGHMPLARTA 498 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIASYHDAIES 252 + + ++A + A+L L + G + + Sbjct: 499 AFARLRTGDPAKARRHFQDALSLLGDSTGAAAEAVLHAGLGLAKSRLGRPREADDALKNA 558 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L A+SL Q+ + L++ L Sbjct: 559 RALAPQHPQVVRLYARSLAHQDDR------LDQA------------------------LD 588 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQAN 371 A + E +S + + ++ ++ A +A+ P + L +E A Sbjct: 589 LAEQAVENAPDSPSAHRALGQVQFRRDELEAARRHLRIALDAGGPSATLLERLGDVEAAL 648 Query: 372 SHNTDKILYWTQSALHAMPD 391 ++T YW Q AL PD Sbjct: 649 GNDTAAQTYW-QRALDRNPD 667 Score = 37.2 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 4/115 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A E L+ + +L G L++A YA +A P Sbjct: 154 GDYEEAISHFEAALEQVPEAPVLLLALADAHEAQGALSTALFYARRAQTQGSPRPSPYRR 213 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + A + + A+ Q + N AR+ AD G + Sbjct: 214 LAEMQRAAGDPAAALRTYQQLLDHVPNANDAHR----ARAAIQADLGRTKGAIQS 264 >gi|307578327|gb|ADN62296.1| tetratricopeptide repeat protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 398 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 49/389 (12%), Positives = 112/389 (28%), Gaps = 44/389 (11%) Query: 60 AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107 F A L + R G+ + GL + + A ++ Sbjct: 13 WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 72 Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163 + + ++ L +L + + + A + + + P + FA+ +L + Sbjct: 73 AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 127 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222 + G L+ A+ T+ I AP ++ Y ++W +AI + + + Sbjct: 128 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVVTGEPMG 187 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + A + + + + S+ + I + A Sbjct: 188 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRSGIIEGRIEADLGHHEAAVRA 247 Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333 E+ + +P P + Y + + A E + + +++ Sbjct: 248 WERAARHDPEYLPEIIPSLLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 301 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391 + QA +K P L + A+ + LY + + + Sbjct: 302 LIESQEGPAQARVYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 361 Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417 P + G + W P K Sbjct: 362 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 388 >gi|193784770|dbj|BAG53923.1| unnamed protein product [Homo sapiens] Length = 531 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 46/304 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L++ A+ +L + D A+ Y +AL + P Sbjct: 139 ANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTR---DTAEAKMYYQRALQLHPQ 195 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE----------- 235 + ++ AIT L K E+ + L + + Sbjct: 196 HNRALFNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 255 Query: 236 -------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D G + +++KL + +A + + S + Sbjct: 256 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 315 Query: 277 RKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 AE ++ +V H P A Y E + + A + E + Sbjct: 316 SMAEEWYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEA---AALQPSQRELRLA 371 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALH-A 388 ++++ MG +A + E + LL+ I N DK L AL Sbjct: 372 LAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQ-ENHDKALDAIDKALQLK 430 Query: 389 MPDP 392 DP Sbjct: 431 PKDP 434 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 92/282 (32%), Gaps = 35/282 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ + A + + H+ +V L ++ + + ++A E + LQ+ Sbjct: 272 GVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNL--GRLYRSLGENSMAEEWYKRALQVA 329 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E + L G A + +A + P + A+ Q + + A Sbjct: 330 HKAEI-LSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEK- 387 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + LL A + + + + A++ I ++ Sbjct: 388 MTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVI------SELF 441 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ + + + +L+K ++ ++N + ++ + Sbjct: 442 FTKGNQLREQNLLDKAFES------------------------YRVAVQLNPDQAQAWMN 477 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + I G A A A+++ P ++ LA++++ Sbjct: 478 MGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLE 519 >gi|34498130|ref|NP_902345.1| cellulose synthase subunit C [Chromobacterium violaceum ATCC 12472] gi|34103985|gb|AAQ60345.1| cellulose synthase, subunit C [Chromobacterium violaceum ATCC 12472] Length = 1270 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 27/267 (10%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV 194 A EK+ + P + ++ + D SA+ A + L+ + A+ Sbjct: 543 AALEKIPEASRTPGMAALQRRAWLKQTLALADAESARGEGWRARRRLEEAEARLAGDGAL 602 Query: 195 VQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIAR-------SLENADKGDMI 243 + A + RA T + + A + + Sbjct: 603 LADVARAWQRMGDPDRARTLMRDACLAQPTADNELAYAGLLLDQKRLAEAEPALAALARN 662 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302 A + L D ++ A+ + + R+A+ IL + P +P + Sbjct: 663 GQRLSAGQRQTLKDLLAGQALIRAEQARAAGQPRQADDILRQAALAAPDNPRLLRALAE- 721 Query: 303 LSENTVGKLK----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + G+ R ++ + E+ + + + G + A + A L + P + Sbjct: 722 -GDMASGRWDAARGRLDKILAARPDDDEARLALLDADIGAGRLGAARSGADLLSQPKPGR 780 Query: 359 ------EIFLLLAQIEQANSHNTDKIL 379 + +A + A+ +++ Sbjct: 781 DADFMLRVLSRMAALGDADRVDSELAR 807 >gi|323138833|ref|ZP_08073896.1| ATP synthase F0, A subunit [Methylocystis sp. ATCC 49242] gi|322395875|gb|EFX98413.1| ATP synthase F0, A subunit [Methylocystis sp. ATCC 49242] Length = 525 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 5/188 (2%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 ++ R + Y L L + A +Q++ A +L I T+ Sbjct: 117 ALFYDKGARERAITDYTQALAFQPRFVLALLRRAEAFRAGKQWDAAIADYRRVLDIDPTQ 176 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A GD++ A T+A+ +P + + + E A+ ++ Sbjct: 177 VEAYVGRGDAYLAKGDVDRALSDVTEAIGRAPKSAELYWKRGTLFRSKGELDNALRDFSE 236 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + E + R R+ +G++ + D +L++ A I A+ +L Sbjct: 237 AIQLNPELLQARV----DRADMYRAQGNLPLARQDLEAALRVDPEFRPA-IEASATLSKL 291 Query: 274 NKKRKAEV 281 + +KA Sbjct: 292 VEAQKAVR 299 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 16/227 (7%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 + + ++ L G AA ++ A +H + Sbjct: 61 GSIIAGRRESKSNRIAAYLNRGEAYRAAGDLDRA-----IADVEHALQLDPKSAQAYADR 115 Query: 130 ALA---ERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDIS 184 A + A + + P + E+ R G ++A + LDI Sbjct: 116 AALFYDKGARERAITDYTQALAFQPRFVLALLR--RAEAFRAGKQWDAAIADYRRVLDID 173 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P Y+ + RA++ + + A + A L R KG++ Sbjct: 174 PTQVEAYVGRGDAYLAKGDVDRALSDVTEAIGRAPKS----AELYWKRGTLFRSKGELDN 229 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + D E+++L + A + A +Q A LE +V+P Sbjct: 230 ALRDFSEAIQLNPELLQARVDRADMYRAQGNLPLARQDLEAALRVDP 276 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 11/200 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GDL+ A AL + P +A + L + A A + Sbjct: 86 RAAGDLDRAIADVEHALQLDPK---SAQAYADRAALFYD-KGARERAITDYTQALAFQPR 141 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L+ R+ A+ D L + + A + + +++ +A + Sbjct: 142 FVLALLRRAEAFRAGKQWDAAIADYRRVLDIDPTQVEAYVGRGDAYLAKGDVDRALSDVT 201 Query: 285 KIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + P+ A +Y L+ ++N E +++ V + + G Sbjct: 202 EAIGRA--PKSAELYWKRGTLFRSKGELDNALRDFSEAIQLNPELLQARVDRADMYRAQG 259 Query: 340 SIDQAHAKAMLAMKIAPRKE 359 ++ A A+++ P Sbjct: 260 NLPLARQDLEAALRVDPEFR 279 >gi|269139428|ref|YP_003296129.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202] gi|267985089|gb|ACY84918.1| hypothetical protein ETAE_2083 [Edwardsiella tarda EIB202] gi|304559324|gb|ADM41988.1| predicted periplasmic heat shock protein YciM precursor [Edwardsiella tarda FL6-60] Length = 389 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 85/260 (32%), Gaps = 19/260 (7%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ ++ +D + Sbjct: 83 GEVDRAIRIHQSLMESASLSFEQRLLAVQQLGRDYMAAGLYDRAEEMFSQLVDEADFRVS 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W +AI + + K+ R A +L+ D+ + Sbjct: 143 ALQQLLLIHQATSDWHKAIDAAEKLVRLGKDQQRGEIAHFYCELALQAMGSDDLDRAQSL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIANIYTHL 302 ++ SI + + + KA +LE K + P + Y L Sbjct: 203 LKKAAAADKGCARVSIMRGRVFQALGEPAKAVAAFSQVLEQDKAFVSEVLPLMETCYQAL 262 Query: 303 -LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS-IDQAHAKAMLAMKIAPRKEI 360 E L+R +++++ S ++ +E ++ A ++ P + Sbjct: 263 GQPEPWHDFLRRC-----VDEDAGASAELMLGQVIEAQEGLEAAQVYVSRQLQRHPTMRV 317 Query: 361 FLLLAQIEQANSHNTDKILY 380 F L A + Sbjct: 318 FHRLIDYHLAE-AEDGRARE 336 >gi|58581806|ref|YP_200822.1| tetratricopeptide repeat protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623710|ref|YP_451082.1| hypothetical protein XOO_2053 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576637|ref|YP_001913566.1| tetratricopeptide repeat protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426400|gb|AAW75437.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367650|dbj|BAE68808.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521089|gb|ACD59034.1| heat shock protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 392 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 91/303 (30%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI + ++ + + + + N G + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEQVTGEPMGKLISQFECELADRNRGLGKTDDALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + Y + Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GDISG------ARNFLSEMTEHYRGIAPVLALTQLIEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L + A + L + + +P + G + W P K Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|332859016|ref|XP_001152053.2| PREDICTED: pre-mRNA-processing factor 6 isoform 3 [Pan troglodytes] Length = 939 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 577 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 634 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 635 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 694 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 695 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 754 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 755 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 812 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 813 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 870 Query: 391 D 391 D Sbjct: 871 D 871 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 286 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 342 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 343 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 394 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 395 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 447 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 448 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 493 >gi|332262339|ref|XP_003280218.1| PREDICTED: pre-mRNA-processing factor 6 isoform 1 [Nomascus leucogenys] Length = 941 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMERAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|323934090|gb|EGB30532.1| cellulose synthase operon protein C [Escherichia coli E1520] Length = 1109 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 304 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 361 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 362 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 421 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 422 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 481 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 482 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNNNIQELVNRLQSDQV---LETANRLRES 538 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 539 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 592 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 593 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 644 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 536 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 595 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 596 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 655 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 656 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 690 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 209 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 263 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 264 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 323 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 324 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 367 >gi|189067252|dbj|BAG36962.1| unnamed protein product [Homo sapiens] Length = 941 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARTMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|40807485|ref|NP_036601.2| pre-mRNA-processing factor 6 [Homo sapiens] gi|24212088|sp|O94906|PRP6_HUMAN RecName: Full=Pre-mRNA-processing factor 6; AltName: Full=PRP6 homolog; AltName: Full=U5 snRNP-associated 102 kDa protein; Short=U5-102 kDa protein gi|7658291|gb|AAF66128.1|AF221842_1 U5 snRNP-associated 102 kDa protein [Homo sapiens] gi|4164166|dbj|BAA37140.1| unnamed protein product [Homo sapiens] gi|12804511|gb|AAH01666.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo sapiens] gi|55664585|emb|CAH71582.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo sapiens] gi|55958583|emb|CAC16610.2| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo sapiens] gi|56203967|emb|CAI21906.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Homo sapiens] gi|119595580|gb|EAW75174.1| chromosome 20 open reading frame 14, isoform CRA_a [Homo sapiens] gi|261858980|dbj|BAI46012.1| PRP6 pre-mRNA processing factor 6 homolog [synthetic construct] Length = 941 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L] gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Lyngbya majuscula 3L] Length = 421 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 65/210 (30%), Gaps = 31/210 (14%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + R GDLN A KAL+I+P+ + A+ Q + Sbjct: 8 RGI--DKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQALQI 65 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E + R L GD + DA + LK+ N A + + Sbjct: 66 NSESIE----VYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQ 121 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI--- 334 A ++ A +Y + KL LE IN+ + ++ + + Sbjct: 122 AAIASFKQA---------AQLYL-----DQQDKLNCRRCLESINQIQQQQILALGRAQTN 167 Query: 335 -----ALEMGSIDQAHAKAML---AMKIAP 356 A+ + + +++ P Sbjct: 168 DFCHQAINKVNTGKYREALEDFNWLLEVDP 197 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 78/264 (29%), Gaps = 39/264 (14%) Query: 126 EVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A LQI + + L + GD A A + L I Sbjct: 42 RAMARFDLGDQQGALADYTQALQINSESIEVYFGRGLARLAL--GDATGAIEDANQILKI 99 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK------KKNAKEWNR---------NRAIL 228 +P+ P + Y + AI Q +++ R + IL Sbjct: 100 NPNQPAACKLQGSAYRKLGDNQAAIASFKQAAQLYLDQQDKLNCRRCLESINQIQQQQIL 159 Query: 229 LIARS---------LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + R+ + + G + D L++ + A R+A Sbjct: 160 ALGRAQTNDFCHQAINKVNTGKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRA 219 Query: 280 EVILEKIWKVNP-------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 L + ++NP H + + + G + +L + N E+ + L+ Sbjct: 220 IQDLGQAMELNPQDAQVRYHRGL----VRIELGDYRGAIDDLTKLLQSNPENRDVLIHRG 275 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 ++MG QA + + P Sbjct: 276 NAYIQMGDYRQAIEDYSRVITLKP 299 >gi|300922355|ref|ZP_07138477.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|301326679|ref|ZP_07220003.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] gi|300421295|gb|EFK04606.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|300846654|gb|EFK74414.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] Length = 1157 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|229172256|ref|ZP_04299820.1| hypothetical protein bcere0006_13700 [Bacillus cereus MM3] gi|228611244|gb|EEK68502.1| hypothetical protein bcere0006_13700 [Bacillus cereus MM3] Length = 420 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITHYESLLAEHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 294 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340 +K L + LK A L+E K E L+ V + A++ G Sbjct: 295 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 339 Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 340 QLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|218702295|ref|YP_002409924.1| cellulose synthase subunit BcsC [Escherichia coli IAI39] gi|218372281|emb|CAR20144.1| cellulose synthase subunit [Escherichia coli IAI39] Length = 1157 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A G+ + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGEPTQALETYKDAM 738 >gi|256020877|ref|ZP_05434742.1| cellulose synthase subunit BcsC [Shigella sp. D9] gi|332282091|ref|ZP_08394504.1| cellulose synthase subunit [Shigella sp. D9] gi|332104443|gb|EGJ07789.1| cellulose synthase subunit [Shigella sp. D9] Length = 1157 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIHELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|193061654|ref|ZP_03042751.1| cellulose synthase operon protein C [Escherichia coli E22] gi|194428684|ref|ZP_03061221.1| cellulose synthase operon protein C [Escherichia coli B171] gi|218556081|ref|YP_002388994.1| cellulose synthase subunit BcsC [Escherichia coli IAI1] gi|300907574|ref|ZP_07125210.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|301306689|ref|ZP_07212746.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|192932444|gb|EDV85041.1| cellulose synthase operon protein C [Escherichia coli E22] gi|194413267|gb|EDX29552.1| cellulose synthase operon protein C [Escherichia coli B171] gi|218362849|emb|CAR00479.1| cellulose synthase subunit [Escherichia coli IAI1] gi|300400691|gb|EFJ84229.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|300838082|gb|EFK65842.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|315254055|gb|EFU34023.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1] gi|320198343|gb|EFW72946.1| Cellulose synthase operon protein C [Escherichia coli EC4100B] gi|323160574|gb|EFZ46515.1| cellulose synthase operon protein C [Escherichia coli E128010] Length = 1157 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|15639938|ref|NP_219391.1| hypothetical protein TP0954 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026177|ref|YP_001933949.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum SS14] gi|3323274|gb|AAC65909.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018752|gb|ACD71370.1| hypothetical protein TPASS_0954 [Treponema pallidum subsp. pallidum SS14] gi|291060309|gb|ADD73044.1| putative tetratricopeptide repeat protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 478 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 50/297 (16%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRI 167 + YL L+ + A E E + Q T V Y + Sbjct: 74 RAEKRIQYLYLSTLISA------GKLTHAQELAEKLGQDGPTASETVQLWYAHAMIAQAK 127 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 D+ ++Y K L P W ++ ++++A+ ++ + R Sbjct: 128 RDVRKKKQYVEKILAQDPHDLWALTERGYDFLSVNDYAQAVQAFSRALRVEPRAQDARV- 186 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +G M + + L+ A A+ N+ +A LE++ Sbjct: 187 ---GLGKVYYLQGKMQEAEAQYRQVLQDTPEHERALAECARVKAETNRVLEAIRDLERVV 243 Query: 288 KVNPH-P----EI------------------------ANIY-THLLSENTVGKLKRALRL 317 +++PH P ++ A+ Y H+ +L RA + Sbjct: 244 QLDPHDPAYWTDLGTYLSQAGKKERAAAAFERAVALSADAYFAHIYLGGIYDELGRAEKA 303 Query: 318 -------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ + S + + E ++A A+ AP + L+ + Sbjct: 304 IEHYQRAVQLYPKYHFSFESLGVLFWEQQRWEEAREAFATALTYAPTNISYALMTAL 360 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 77/235 (32%), Gaps = 15/235 (6%) Query: 178 TKALDIS---PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 +A + P+ + + + + + W A+ + + L ++ + Sbjct: 32 ERAQLLKSENPNIRFAAQ--LSGLLEKQRWEEALQLFDT-LSPEHRAEKRIQYLYLSTLI 88 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + ++ A ++ RK + +EKI +PH + Sbjct: 89 SAGKLTHAQELAEKLGQDGPTASETVQLWYAHAMIAQAKRDVRKKKQYVEKILAQDPH-D 147 Query: 295 IANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + + Y L + ++ R + + ++ V + K+ G + +A A+ Sbjct: 148 LWALTERGYDFLSVNDYAQAVQAFSRALRVEPRAQDARVGLGKVYYLQGKMQEAEAQYRQ 207 Query: 351 AMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL-WISDDGYLS 402 ++ P + A+++ + + I + + DP W YLS Sbjct: 208 VLQDTPEHERALAECARVKAETNRVLEAIRD-LERVVQLDPHDPAYWTDLGTYLS 261 >gi|260857634|ref|YP_003231525.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368] gi|260870256|ref|YP_003236658.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128] gi|257756283|dbj|BAI27785.1| cellulose synthase subunit [Escherichia coli O26:H11 str. 11368] gi|257766612|dbj|BAI38107.1| cellulose synthase subunit [Escherichia coli O111:H- str. 11128] gi|323154038|gb|EFZ40244.1| cellulose synthase operon protein C [Escherichia coli EPECa14] Length = 1140 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398 >gi|316971980|gb|EFV55688.1| Pre-mRNA-processing factor 6 [Trichinella spiralis] Length = 953 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 16/262 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-WVT 191 + NI + AV + A+ KA D +P A W+ Sbjct: 637 QGSRNILARAFQANPNSEDIWLAAV----KLESENSEYERARLLLKKARDTAPTARIWMK 692 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A ++ + + A+ + Q + E + ++ + KGD+ ++ E Sbjct: 693 SAKLEWCLNELD--EALDLIKQGVEMYPESEKLWMMVGQLYAS----KGDVESARKAYAE 746 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310 LK C I I AA+ Q+ +A +LEK NP +P + + G+ Sbjct: 747 GLKHCSGCIAMWILAAQFEEEQDCFIRARALLEKARLKNPKNPSLWLAAIRIEQRGGFGE 806 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQ 369 L + + + ++ ++ A+++ S +K++ A++ + L ++++ Sbjct: 807 AALNLLARALQ-DCPNAGLLWAE-AIQIESRPARKSKSVDALRKCEHDPHVLLAVSKLFW 864 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 + +K W + PD Sbjct: 865 SERK-VNKAREWFNRTVKVEPD 885 >gi|52425528|ref|YP_088665.1| hypothetical protein MS1473 [Mannheimia succiniciproducens MBEL55E] gi|52307580|gb|AAU38080.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 398 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 84/264 (31%), Gaps = 58/264 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151 + A ++H + + + E LL Q + + + A M++ P Sbjct: 91 GEVDRALRIHQNLDRSSYYTFEQ--KLLAKQ--QLAKDFMSVGFFDRAETLYIMLVDEPE 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 +A AL AV+ Q +W +AI Sbjct: 147 ------------------------FAEGALQ--------QLAVIYQKTK--DWKKAINVA 172 Query: 212 NQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + K + +E N A + ++ ++L + + + AS+ L Sbjct: 173 EKLAKISPQEDNIELAQYYCEYARTLGEESKE-QPKEILQQALTVSPSCVRASMLLGDFL 231 Query: 271 ISQNKKRKAEVILE------KIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEEINKE 323 I + + KA +LE + P++ Y HL + L RA + + N Sbjct: 232 IQEEQYAKAVPVLENVLTQNASYVGEVLPQLKECYQHLNQLDNFELFLIRANQEYKHN-- 289 Query: 324 SVESLVIVSKIALEMGSIDQAHAK 347 S V ++ L +A A+ Sbjct: 290 ---SSVALALADLIAEQDGRAAAQ 310 >gi|191165276|ref|ZP_03027119.1| cellulose synthase operon protein C [Escherichia coli B7A] gi|300815254|ref|ZP_07095479.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|309796168|ref|ZP_07690579.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|331679608|ref|ZP_08380278.1| cellulose synthase operon protein C [Escherichia coli H591] gi|190904678|gb|EDV64384.1| cellulose synthase operon protein C [Escherichia coli B7A] gi|300532146|gb|EFK53208.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|308120229|gb|EFO57491.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|331072780|gb|EGI44105.1| cellulose synthase operon protein C [Escherichia coli H591] Length = 1157 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|168701390|ref|ZP_02733667.1| TPR domain protein [Gemmata obscuriglobus UQM 2246] Length = 675 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 15/273 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 + + + ++ A + + H L L I + A L Sbjct: 10 RAVAAHRSGSLDEAEHGYRQLLTATPNHPPALTNL--AAIVAQRGDADEAERLYLESLGA 67 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAI 208 + ++L R G A + AL +SPDAP + W R++ Sbjct: 68 DPDQLNTHFNLANLYRRTGRSADAIPHYEDALRLSPDAP-AVLVNLGLAAGDVGNWPRSV 126 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + + L+ +L A G + E++ + Sbjct: 127 ECFARAVTVNPDVP--EGLTLLGDAL--ARCGRRAEAIGAFREAVARFPDQPRGYCHLGL 182 Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKE 323 L + + +A +LEK ++ +PE + Y + + + RA E+ Sbjct: 183 HLAATGEHEQAVEVLEKAVELRADYPEAQNALGVAYEAVGRADEAQRAYRAA--VELRDG 240 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + E G + +A A A+ +AP Sbjct: 241 FADAWANLGTSLGEQGRVGEAVAALRKALDLAP 273 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 6/195 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY 158 A + Y + V + A + + E + P E + Sbjct: 86 GRSADAIPHYEDALRLSPDAPAVLVNLGLAAGDVGNWPRSVECFARAVTVNPDVPE-GLT 144 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L R G A +A+ PD P + E +A+ L + + Sbjct: 145 LLGDALARCGRRAEAIGAFREAVARFPDQPRGYCHLGLHLAATGEHEQAVEVLEKAVELR 204 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ + L +A G + +++L D A SL Q + + Sbjct: 205 ADYPEAQNALGVAY----EAVGRADEAQRAYRAAVELRDGFADAWANLGTSLGEQGRVGE 260 Query: 279 AEVILEKIWKVNPHP 293 A L K + P+P Sbjct: 261 AVAALRKALDLAPNP 275 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 7/134 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L R++ G + + H + L N A A + + +AE + + Sbjct: 7 LFQRAVAAHRSGSLDEAEHGYRQLLTATPNHPPALTNLAAIVAQRGDADEAERLYLESLG 66 Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +P H +AN+Y + + + ++ ++ LV + A ++G+ + Sbjct: 67 ADPDQLNTHFNLANLYR--RTGRSADAIPHYEDALRLSPDAPAVLVNLGLAAGDVGNWPR 124 Query: 344 AHAKAMLAMKIAPR 357 + A+ + P Sbjct: 125 SVECFARAVTVNPD 138 >gi|119477999|ref|ZP_01618099.1| TPR domain protein [marine gamma proteobacterium HTCC2143] gi|119448912|gb|EAW30154.1| TPR domain protein [marine gamma proteobacterium HTCC2143] Length = 747 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 86/268 (32%), Gaps = 45/268 (16%) Query: 117 HNEYLVYLLEVQIALAERQYN------IAHEKLEMMLQIPATREFAVYSL--YFESCR-- 166 ++ ++ QY A LE P R A+ L R Sbjct: 464 NDAAQTVMVRASALQMLGQYQHQYGINTAITLLES--PDPLVRLAALRVLNGMTLQQRMT 521 Query: 167 -----IGDL------NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + D +A+ A L S A + ++ RAI + Sbjct: 522 TLWPMLEDPVLAVRIEAARLLAGVGLRGSMRAALSPD-------RQQQLDRAIKEYIESV 574 Query: 216 KNAKEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K+ + + ++ ++L AD+ A+Y A+ L + I A + A +Q Sbjct: 575 KSNADAPSGQLQLGVLYQALGRADEAK--AAYEHALV---LEPDFIPAMLNLADWYRAQG 629 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESL 328 + ++A L+K +V P + I +Y L + L++A L + Sbjct: 630 QDQRALPQLQKALRVLPDNIDANYAIGLLYIRLKNLGLATESLQKAASLA---PDISHYS 686 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + E G + A + P Sbjct: 687 YVYAVALFESGKREWAITSLKQTLNRHP 714 >gi|150397854|ref|YP_001328321.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae WSM419] gi|150029369|gb|ABR61486.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae WSM419] Length = 634 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 74/227 (32%), Gaps = 37/227 (16%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNRAIL 228 A+R KA+++ P+ + + ++W + L+ K A + N A Sbjct: 367 ARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLKSILDMSAK-ALALDPNLAEA 425 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 +R L G + + ++L L + A++ + L +Q + ++A E+ Sbjct: 426 HASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFFERA-- 483 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES-LVIVSKIALEMGSIDQAH-- 345 + S++ + + + + + E A Sbjct: 484 -----------AEIRSDD------------YFSPIHLMGCHLSLGR---EAERQRWARIG 517 Query: 346 -AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +A A++ P + A+ ++ W AL PD Sbjct: 518 IERATRALERNPENASPAHRGALALAHMGEAERAKEWVSRALATDPD 564 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 23/167 (13%) Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI------S 184 + Q A + + P+ E +Y + + G A + +A +I S Sbjct: 436 DGQTEEASREFRQALALDPSLYEANLYYGRFLFAQ--GRFQEAIGFFERAAEIRSDDYFS 493 Query: 185 PDAPWVTEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 P + + + W+R A L + +NA +R +L A Sbjct: 494 PIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHR--------GALALAHM 545 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 G+ + +L + ++A AA + +A +LE + Sbjct: 546 GEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALELLETV 592 >gi|320038307|gb|EFW20243.1| DnaJ and TPR domain-containing protein [Coccidioides posadasii str. Silveira] Length = 535 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 16/166 (9%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------E 192 A L Q P Y + GD A ++ +AL + PD+ + Sbjct: 246 AMSLLRENSQDPDALFLRGRLFYLQ----GDNEQAIKHFKRALSLDPDSTETVKYLRMVQ 301 Query: 193 AVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 +++ A+ + AI + + LL R+ + + + + Sbjct: 302 KLLRHKDEGNAAFKARRYREAIKLYTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAI 361 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++L+L A AK+ KA L+ I + NPH Sbjct: 362 EDCTKALELDPTYSKAKRVRAKAYGGTGDWEKALNELKSIAESNPH 407 >gi|110643777|ref|YP_671507.1| cellulose synthase subunit BcsC [Escherichia coli 536] gi|110345369|gb|ABG71606.1| hypothetical protein YhjL [Escherichia coli 536] Length = 1157 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQTAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|94971753|ref|YP_593801.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553803|gb|ABF43727.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 718 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 76/267 (28%), Gaps = 17/267 (6%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A + A K++ V + + E L L L QI + A + +L + Sbjct: 42 AGRLQPAAKIYEQVLRGDPNNVEALHSLSILASQI----GETATAERLMRQVLSLQPEHV 97 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+ +L G A K + + P + + + +AI + Sbjct: 98 GALSNLGITLQSQGRQEDAIACYEKVIALRPHHAEAHNNLGNLRLAQGDLEQAIASYQRA 157 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ A +G+ + ++ A L Sbjct: 158 LDLKPDY----ADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMG 213 Query: 275 KKRKAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + A E+ +P + + ++ + + VE+ Sbjct: 214 ETSAAIEAFERAIALRAEYADPLNNLGVALQEQGRMSAA--VEHYHQAIALRPADVEAHF 271 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356 + E+ D+A A A++I P Sbjct: 272 NLGSALQELHRTDEAIAAYQSALEIQP 298 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 15/198 (7%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 +IA + +A + H H + L L Q A + L + Sbjct: 116 AIACYEKVIALRPH------HAEAHNNLGNLRLAQ-----GDLEQAIASYQRALDLKPDY 164 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A Y+L R G+ A+ +A+ P+ P + E S AI + Sbjct: 165 ADAHYNLGNAYQRRGNWTQARESYRRAVASRPEFPEAQNNLGVVLREMGETSAAIEAFER 224 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 E+ A L + ++G M A+ +++ L + A +L Sbjct: 225 AIALRAEY----ADPLNNLGVALQEQGRMSAAVEHYHQAIALRPADVEAHFNLGSALQEL 280 Query: 274 NKKRKAEVILEKIWKVNP 291 ++ +A + ++ P Sbjct: 281 HRTDEAIAAYQSALEIQP 298 >gi|158320436|ref|YP_001512943.1| TPR repeat-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140635|gb|ABW18947.1| TPR repeat-containing protein [Alkaliphilus oremlandii OhILAs] Length = 312 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 64/187 (34%), Gaps = 10/187 (5%) Query: 109 YVSQQHT-FHNEYLVYLLEVQIALAE---RQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 Y+ H NE + LLE IAL + A E +L+I Y L Sbjct: 31 YMKAYHCRGGNEDIDLLLE--IALLQDELNNEEAAKEFYTKILEIDGNEARGHYGLGTIY 88 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD + A Y KA+++ P + Y + RAI QK Sbjct: 89 DNQGDFSKAIEYYKKAIELDPYYEEAYFFLANAYDEIGDKDRAIE-YYQKTIEINPLEFW 147 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + + E D+ + + ++L + + A L Q +K +A E Sbjct: 148 -AYVNLGSIYEELDRNKESLAMME--KALDIEPTNFKALFNMGVILNKQGEKLEAIQYYE 204 Query: 285 KIWKVNP 291 + NP Sbjct: 205 AAIEENP 211 >gi|327272790|ref|XP_003221167.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like [Anolis carolinensis] Length = 917 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 67/194 (34%), Gaps = 24/194 (12%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A+ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARVAPNHLNVYINLANLIRANDSRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA----EVILE------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 L+ NK +A LE +W +A +Y L + LK R Sbjct: 572 LLLKMNKPLQAKEAYLRALELDRTNADLWYN-----LAIVYIELK--DPTEALKNFNRAL 624 Query: 319 EINKES----VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH 373 E+N S +++ + + +A + + +K P + L + + Sbjct: 625 ELNPNHKLALFNSALLMQESG-DARLRPEARKRLLDYVKEEPQDANGYFNLGMLAMDDKK 683 Query: 374 NTDKILYWTQSALH 387 + + W + A+ Sbjct: 684 D-AEAETWMKKAIK 696 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 7/150 (4%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVVQ 196 A E L++ T Y+L + D A + +AL+++P+ A++ Sbjct: 582 AKEAYLRALELDRTNADLWYNLAIVYIELKDPTEALKNFNRALELNPNHKLALFNSALLM 641 Query: 197 QYVLAKEWS-RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q A L K A + D + +++KL Sbjct: 642 QESGDARLRPEARKRLLDYVKEEP----QDANGYFNLGMLAMDDKKDAEAETWMKKAIKL 697 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285 A A K+ KA +LE+ Sbjct: 698 QAGFRSALFNLALLYSQTAKELKALPVLEE 727 >gi|229084624|ref|ZP_04216893.1| hypothetical protein bcere0022_12570 [Bacillus cereus Rock3-44] gi|228698700|gb|EEL51416.1| hypothetical protein bcere0022_12570 [Bacillus cereus Rock3-44] Length = 420 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 88/277 (31%), Gaps = 51/277 (18%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + E ++ ++ ++ + A + +L A+ L Sbjct: 121 QKLLKAKEMMPEEPVITFGLAELYSSKGEEQKAIAYYQALLSDHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVV------QQYVLAKEWSRAITFLNQKKKN 217 IG+ A Y + L D + + W K Sbjct: 180 LSAIGNWEEAITYYEEGLAEQKDIHSLFGYAFTLYQGEEYQRSIGAW-----------KE 228 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 KE + A L + + +G + SY E +K+ + S+ + A K Sbjct: 229 LKELDPEYASLYMYLAKCYEKEGMLQESYETLHEGIKIDELSVPLYVELANIAAKIGKLT 288 Query: 278 KAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +AE +L+K +++P H + I Y ++L E E E L+ V + Sbjct: 289 EAEELLQKALQLDPGH--LGAILKYAYILKEQ----------------EKYEELIAVVEN 330 Query: 335 ALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 A++ G D A AK L M + + Sbjct: 331 AMDSGEQDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|50085935|ref|YP_047445.1| putative signal peptide [Acinetobacter sp. ADP1] gi|49531911|emb|CAG69623.1| conserved hypothetical protein; putative signal peptide [Acinetobacter sp. ADP1] Length = 567 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 63/163 (38%), Gaps = 2/163 (1%) Query: 231 ARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R+L+ + D+ A+ A + + A A + ++ + A L+KI + Sbjct: 81 QRALDIALEYNDLKAALDIATHWVVQEPEDVPAMFYLAHIALRAHEYKLAANTLDKILNI 140 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +P+ ++ I + E+ + L KE+ LV+++ + + G + A Sbjct: 141 DPNADLEQILAGIAPESKEDRENLLETLKTSKEKENPSILVMIAGLEAQNGHLQDALINT 200 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A++ P+ F+L+ ++ + W + D Sbjct: 201 NRALRKRPKVTGFILMKANLLIGLNDIEGAQKWYAKSSKRHRD 243 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 30/302 (9%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 L KR G+ + L+ I ++I A+K ++ S++H + + + L E + + Sbjct: 202 RALRKRPKVTGFILMKANLL-IGLNDIEGAQKWYAKSSKRHRDNLD--IRLAEARFLIRH 258 Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + +A +KLE +++ + A L S + A++Y +D+ A + Sbjct: 259 NESELALKKLEDIIKTWPDAEDAKFIA--GL--TSIDLKQYEKAEQY---LVDLRYSAKY 311 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +A V A+ + + + + +R L+ +G++ + Sbjct: 312 QNDAYYYLAVNAER-KQHFETAKAYYRLVDGSLYVVSRRNLVSI----FEKQGNLNDALR 366 Query: 248 DAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK-VNPHPEIANIYTHLL-- 303 + A A+ L K+ A +L++ K ++ PE+ IY +L Sbjct: 367 FLTQERVNYPQHASFLYQAQAEILKKTGNKKAALRLLDEAIKNISDDPEL--IYAEVLLL 424 Query: 304 -SENTVGKLKR-ALRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + KL R +L I S L + +AL+ +D+A A LA++ AP + Sbjct: 425 DPFSDRDKLDRTLKQLLLIEPNSPTYLNAYAYTLALQNRRLDEARQYAELALEYAPEQAS 484 Query: 361 FL 362 L Sbjct: 485 IL 486 >gi|317486414|ref|ZP_07945241.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] gi|316922324|gb|EFV43583.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] Length = 589 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 88/270 (32%), Gaps = 13/270 (4%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRI 167 V T N ++ + R+ + A LE ++ ++ L E+ Sbjct: 94 AVKLLLTLENRPQPFIDAAAWLMLNRETSEARSLLEQAVKRVPGD-LGLHLLLAETWLEQ 152 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A + + PD+ V + + YV + A + + + A Sbjct: 153 GDNEQALKILKEYRKQRPDSELVQQELGILYVKTGHFKDADKVFSALPQRLRTSFVRYAH 212 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + +++ + A A+ L + + +A I + Sbjct: 213 -----AQALVGLKQPHRAIQQLRLAVQESPEFVDAWFELARLLEADRQFSEANEIYNSLI 267 Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + +P +P+I + + GK ++AL + + + + L+ +A A Sbjct: 268 EQDPDNPDIWI--RMVEGQIRAGKGQKALDYALNGPATYGYKLTAATLFLDARMYPEAEA 325 Query: 347 KAMLAMKIAPRK--EIFLLLAQIEQANSHN 374 + +K P E+ LA I + Sbjct: 326 -LLDGLKSDPNAPDEVHFYLAAIAYEYHKD 354 >gi|293412960|ref|ZP_06655628.1| cellulose synthase operon protein C [Escherichia coli B354] gi|291468607|gb|EFF11100.1| cellulose synthase operon protein C [Escherichia coli B354] Length = 1161 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 356 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 413 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 414 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 473 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 474 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 533 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 534 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 590 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 591 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 644 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 645 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 696 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 588 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 647 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 648 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 707 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 708 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 742 >gi|262376647|ref|ZP_06069875.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262308357|gb|EEY89492.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 570 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 10/221 (4%) Query: 171 NSAQRYATKALDISPDAPWV--TEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAI 227 ++A YA +A+ + + + + A + A+ K+ + RA+ Sbjct: 28 STAHLYAAEAVYHANQNYDAIKQSMMAEFAIAAHDIPTALHNYTVLAIKSNSTSVKQRAL 87 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + D+ A+ + + + A + + ++ A LEKI Sbjct: 88 NVA------LEHDDLQAALDISTHWVVQEPQDVPALFYLSHIALKAHEYELAAETLEKIL 141 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSIDQAHA 346 +++ ++ I + E T + L K++ LV+V+ + + G ++QA Sbjct: 142 QIDDSADLEEILAGISPEGTEDRSYLIQALSTTKAKDNPSILVLVAGLEAQNGQLEQALN 201 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 A+K P ++L+ +T L W + + Sbjct: 202 TVNRALKKRPNATGYILMKANLLNALGDTQATLQWYEKSSR 242 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 57/166 (34%), Gaps = 11/166 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPW---VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 R+ + +A R +A PD P ++ + + ++ L + + N+ + Sbjct: 395 RMQNKKAAIRLLEEASKNLPDDPELVYSQVLLLDPHQDRVKLDELLSTLLKIEPNSPTYL 454 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A L ++ + + ++L+ QN A + Sbjct: 455 NAYAYTLAMQNRRLEE------ARRYVEQALEYAPEQASILDTYGYICYLQNDFATAADV 508 Query: 283 LEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVE 326 L K +++NP+ +I Y + + + +L++ + E Sbjct: 509 LYKAYQLNPNVKIGVRYARSLYMKGDLQHFHQVLQQLQQNHPNDPE 554 >gi|288573874|ref|ZP_06392231.1| Tetratricopeptide TPR_2 repeat protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569615|gb|EFC91172.1| Tetratricopeptide TPR_2 repeat protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 382 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299 + A E++ A + A KSL + K +A LEK + PE+A Y Sbjct: 223 AELSAKEAVVFDPGFAEAWLLAGKSLFMRGKDYEATDYLEKAVDLR--PELAEPYFLIGQ 280 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + ++ + + V + ++ LE +D A A+++ Sbjct: 281 AYKNRGRLEDAMEYFSLAISKDPGYQGAYVAMGQMLLEAAQLDLARKVLARAVELDGTDP 340 Query: 360 IFLLLAQIEQANSHNTDKILY 380 L A + + Sbjct: 341 GARFLLGTAMALDGDDEGARG 361 >gi|229029298|ref|ZP_04185388.1| hypothetical protein bcere0028_13940 [Bacillus cereus AH1271] gi|228732046|gb|EEL82938.1| hypothetical protein bcere0028_13940 [Bacillus cereus AH1271] Length = 428 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 90/268 (33%), Gaps = 33/268 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 129 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITHYESLLVEHKVMGGVVIALR-LAET 187 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 188 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 242 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 243 EYASLYMYLAKSYEKEGMLQESYETLQEGIKVDELSVPFYVELANIAAKLGKIAEAEEVL 302 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--- 340 +K L + LK A L+E K E L+ V + A++ G Sbjct: 303 QKA-------------LELDPGHLGAILKYAYILKEQEK--YEELIAVVERAIDSGEPDT 347 Query: 341 ---IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 348 QLLWDLAFAKKQLEMYSDALKHYESAYT 375 >gi|298485614|ref|ZP_07003694.1| Cellulose synthase operon protein C [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159857|gb|EFI00898.1| Cellulose synthase operon protein C [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 1230 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 90/295 (30%), Gaps = 60/295 (20%) Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156 A + ++ N L L + + A+ Q A L + + P R Sbjct: 266 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 324 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213 L + G L++AQ + L P ++ + A+ L+ Sbjct: 325 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 381 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + R +A+ + +GD+ A+ +++K +++ A+ + Sbjct: 382 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 441 Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298 ++ KA V+++++ K P P++ + Sbjct: 442 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 501 Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + L RL+ + S E + ++ ++ G Sbjct: 502 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGE 556 >gi|293651727|pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3 Length = 125 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 34/87 (39%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + Y+ A E + L++ A Y+L + GD + A Y KAL++ P+ Sbjct: 18 AYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNA 77 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKK 215 + Y ++ AI + + Sbjct: 78 EAWYNLGNAYYKQGDYDEAIEYYQKAL 104 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 2/97 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + + + + E L + Y+ A E + L++ A Sbjct: 23 GDYDEAIEYYQKALELYPNNAEAWYNL--GNAYYKQGDYDEAIEYYQKALELYPNNAEAW 80 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y+L + GD + A Y KAL++ P+ + + Sbjct: 81 YNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNL 117 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 4/93 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + GD + A Y KAL++ P+ + Y ++ AI + + + N Sbjct: 21 KQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE--LYPNNAE 78 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A + + +GD + ++L+L N Sbjct: 79 AWYNLGNA--YYKQGDYDEAIEYYQKALELYPN 109 >gi|260598133|ref|YP_003210704.1| tetratricopeptide repeat protein [Cronobacter turicensis z3032] gi|260217310|emb|CBA31285.1| Uncharacterized protein yciM [Cronobacter turicensis z3032] Length = 381 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 89/277 (32%), Gaps = 47/277 (16%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + ++ T Sbjct: 75 GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFNQLV--DETDF- 131 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 RIG + ++Q Y +W +AI + Sbjct: 132 ----------RIG---------------------ALQQLLQIYQATSDWQKAIDAAERLV 160 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE R A +L+ DM + + NS SI + +++ Sbjct: 161 KLGKEHQRVEIAHFYCELALQAMSNEDMDRAMSLLKKGAAADRNSARVSIMMGRIFMTRG 220 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS------ENTVGKLKRALRLEEINKESVESL 328 A +LEK+ ++ E+ + +L + R E N E+ Sbjct: 221 DYAHAVEMLEKV--ISQDRELVSETLEMLQVCYQQLGKPAEWAEFLKRCVEENTG-AEAE 277 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 ++++++ + D A ++ P +F L+ Sbjct: 278 LMLAQVLEQREGADSAQVYITRQLQRHPTMRVFHRLM 314 >gi|190574011|ref|YP_001971856.1| tetratricopeptide repeat-containing protein [Stenotrophomonas maltophilia K279a] gi|190011933|emb|CAQ45554.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 392 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 94/299 (31%), Gaps = 19/299 (6%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ A R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVNRHDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ Y ++W +AI + + + + + G + + Sbjct: 148 ALKHLIGIYQAERDWEKAIDNATRFEDVTGEPMGKLIGQFECELAERFRGAGKLEEARAA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306 + + S+ A I + A E+ +P PE+ + + Sbjct: 208 IARAYQADAMSVRAGIIEGRLETDAGNPEAAVRAFERAASNDPEYLPELLPAL--MQNYR 265 Query: 307 TVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 VG L A E + + ++++ E + A A +K P Sbjct: 266 KVGDLAGARAFLSEMTEHYRGIAPVLALTRLMEEQEGVAPARAYLGRQLKDRPSVRGESA 325 Query: 364 LAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTLCY 417 L + A ++ L+ + + +P + G + W P K Sbjct: 326 LIDLTLAEGADSTATLHDLKHITDQLLVRNPAYRCTRCGFGARTHHWQ--CPSCKEWGT 382 >gi|190572225|ref|YP_001970070.1| putative TPR repeat-containing protein [Stenotrophomonas maltophilia K279a] gi|190010147|emb|CAQ43755.1| putative TPR repeat protein [Stenotrophomonas maltophilia K279a] Length = 689 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 58/203 (28%), Gaps = 7/203 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A + A P + A+ L Q + A + Sbjct: 6 IQALRQNQADQAVQLAQAWTRDEPGQANAHRWLALALQQQGNAEEAMEALQQALRLAPD- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + + + + + L NS A + A I +N +A+ Sbjct: 65 ---DAQLHLQHAGLLLALRQFEGADEALVRTTGLDPNSFSAYLMQAHLAIGRNDFDEAQR 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 I +V P HPE+ I L + L + + L + L Sbjct: 122 ISTLAARVEPDHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGK 181 Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361 + A +++ P Sbjct: 182 DMLAFAEQSFRRVLELNPSLSSL 204 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 80/228 (35%), Gaps = 7/228 (3%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL + Q + A + + + + A L + G+ A +AL ++PD Sbjct: 8 ALRQNQADQAVQLAQAWTRDEPGQANAHRWLALALQQQGNAEEAMEALQQALRLAPDDAQ 67 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++ A L + + N A L+ ++ + D + + Sbjct: 68 LHLQHAGLLLALRQFEGADEALVR--TTGLDPNSFSAYLM--QAHLAIGRNDFDEAQRIS 123 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI-ANIYTHLLSEN 306 + ++ + + + +A +L K P + A + +L + Sbjct: 124 TLAARVEPDHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDM 183 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + R+ E+N +V ++AL G++ A +A++ Sbjct: 184 LAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVPAAAEAMQVALQQ 231 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 85/269 (31%), Gaps = 41/269 (15%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQ------------------------------QHTFHNE 119 G++++ + A + S S+ + N Sbjct: 140 DGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDMLAFAEQSFRRVLELNP 199 Query: 120 YLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176 L L L VQ+AL + A E +++ LQ P ++ L E S R G A Y Sbjct: 200 SLSSLHGLVVQLALRQGNVPAAAEAMQVALQQPEMDVPSMRRLAGELSLRNGQPLQALDY 259 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 L+ P+ V + ++ + A L+ ++ + L ++E Sbjct: 260 LLPLLETQPEDRQVLQLLLMSWQRLGREDEARARLDAVL---DTDDQLHDVWLARLAIEQ 316 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + ++ + A + + +AE I E+I + P Sbjct: 317 VGSESAVTAVERWMAAM---PAHLPALEARLRLHDMAGEHAQAEAIAERIVSLEPGRVSG 373 Query: 297 NIYT--HLLSENTVGKLKRALRLEEINKE 323 LL + + R L E+ E Sbjct: 374 ETRLVEGLLQRDPAAAVARVQALIELAPE 402 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 7/163 (4%) Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291 ++ + + A + A A +L Q +A L++ ++ P Sbjct: 6 IQALRQNQADQAVQLAQAWTRDEPGQANAHRWLALALQQQGNAEEAMEALQQALRLAPDD 65 Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 H + A + L + +R ++ S + ++ + +A+ D+A + Sbjct: 66 AQLHLQHAGLLLALRQFEGAD--EALVRTTGLDPNSFSAYLMQAHLAIGRNDFDEAQRIS 123 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LA ++ P L + + + D+ L +A A+PD Sbjct: 124 TLAARVEPDHPELLTIDGMVALRRGDADRALALLSAASKALPD 166 >gi|182415012|ref|YP_001820078.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177842226|gb|ACB76478.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 645 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 67/205 (32%), Gaps = 10/205 (4%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + A + L + PD P + + + ++A+ + + + Sbjct: 433 ARSPERREEAIAAYREVLRLKPDHPDAHHGLGLELARLGDKAQAMAEYERAIELRPTYAE 492 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVI 282 L + + D IA A+ ++ A A L+ ++ +A Sbjct: 493 AHHRLGVELARLGGRDQDAIAHLEAAL---RVKPGLAEAHANLADLLLKTPDRLPEAMAH 549 Query: 283 LEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 E+ +P H I + +HL + R I S+++ ++ + Sbjct: 550 YEEALHFDPTLAWVHCRIGFVLSHL-PGRQHEAISRYETALRIEPNSIDAHNGLAIAYIM 608 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362 MG D A + ++I P +E Sbjct: 609 MGRADAARREWETVVRIDPSQESAR 633 >gi|4103604|gb|AAD01798.1| putative mitochondrial outer membrane protein import receptor [Homo sapiens] Length = 941 Score = 51.9 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 637 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 696 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|119595583|gb|EAW75177.1| chromosome 20 open reading frame 14, isoform CRA_d [Homo sapiens] Length = 845 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 483 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 540 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 541 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 600 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 601 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 660 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 661 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 718 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 719 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 776 Query: 391 D 391 D Sbjct: 777 D 777 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 192 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 248 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 249 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 300 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 301 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 353 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 354 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 399 >gi|160896312|ref|YP_001561894.1| TPR repeat-containing protein [Delftia acidovorans SPH-1] gi|160361896|gb|ABX33509.1| TPR repeat-containing protein [Delftia acidovorans SPH-1] Length = 647 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 11/193 (5%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 V W A + N A LL+ + + ++++++ N Sbjct: 40 VAQGRWDEAAQLYEKAI----LANSADASLLVGLGFSHLQAVRPKQALATLLQAIRVLPN 95 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313 S A A K+ I+ + A ++ VNP +P+I + L ++ Sbjct: 96 SQDAWFLAGKAQIALGLEEDAAKSWRRLLAVNPDFLPVYPDILQLLVRL--GCAQEAMEI 153 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 AL+ E + E + + + + + A + A+KI P L + S Sbjct: 154 ALKAAERVPDCFEYQLYHANLLVHAHQTEAAIPYYLQALKINPNSADVLANLGVACRQSG 213 Query: 374 NTDKILYWTQSAL 386 + ++ L +++ A+ Sbjct: 214 DLERALNYSRQAM 226 >gi|242041483|ref|XP_002468136.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor] gi|241921990|gb|EER95134.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor] Length = 843 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 19/226 (8%) Query: 173 AQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A +A ++ P + ++ A + A+ A + Sbjct: 288 ALASFRRACELQPTDVRPHFRAGNCLYAL----GRYAEAKEEYLLALEAAEAGGSQSADI 343 Query: 229 LIA----RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L + +G ++ + E+ LC + A +L + R AE LE Sbjct: 344 LPQIHVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALE 403 Query: 285 KIW-----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + + H ++ + H + E+ ++ ++ V++L + + ++ G Sbjct: 404 EAIFLKEDYADAHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAG 461 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +A + I P L + +++ + A Sbjct: 462 RFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 507 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 37/203 (18%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + E+ G + A + +A + P + + E+ A L + Sbjct: 352 GIAMEA--EGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLK 409 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 +++ A + +L G+ + + ++ L + A + + + Sbjct: 410 EDY--ADAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 465 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A A +YT +L I + + + L Sbjct: 466 A----------------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQ 494 Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361 G ++A A K+ R E++ Sbjct: 495 GESEEAKKALKEAFKMTQRVEVY 517 >gi|59712363|ref|YP_205139.1| hypothetical protein VF_1756 [Vibrio fischeri ES114] gi|59480464|gb|AAW86251.1| conserved protein [Vibrio fischeri ES114] Length = 389 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 93/294 (31%), Gaps = 51/294 (17%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A K+H + + T + + + + A + E +L+ P R Sbjct: 83 GEVDRAIKIHQNLIARPNLTIDQRNIALQQLAKDYMVSGILDRAEKIFEQLLEEPDHR-- 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A + +V + +EW +AI F N Sbjct: 141 -----------------------EAALLQ---------LVAIHQQTREWEQAIQFANSLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + ++ + A +++ ++ + + ++L + + ASI AK L+ + Sbjct: 169 RMGRKKLKLDIAHYYCELAMQELADENLNKAKQNLKKALSSDNQCVRASIMMAKLLMEEE 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENT-VGKLKRALRLEEINKESVES 327 + A LE + + P +A Y L E + LK + + S E Sbjct: 229 NYKSALAHLESVLDQDIDFVSEALPLLAECYEKLDREGALLQFLK--EAISKGAGASAE- 285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILY 380 +++S + + + A + P + L+ + + Sbjct: 286 -LMLSNLIAKHEGVALAQGYMTKQLLKNPTMKGFYRLMGY--HTDEAEDGRAKA 336 >gi|212633293|ref|YP_002309818.1| HemY protein [Shewanella piezotolerans WP3] gi|212554777|gb|ACJ27231.1| HemY [Shewanella piezotolerans WP3] Length = 388 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 71/416 (17%), Positives = 137/416 (32%), Gaps = 53/416 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL--- 57 M+R++ Y +I L ++ + + G+ TS + L F L Sbjct: 1 MVRVLVYLGIILLGFFISPFLAGNKGYLYLAVGDYQVETSIVFAVIALVIFYSLLQLAEF 60 Query: 58 -LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115 + V L + K G +++A + A K M + Sbjct: 61 VIVWVLNLILGSRLLPEKWRKKAARKHTLM----GALALAEEDWAAAEKAMVKGADKGEI 116 Query: 116 FHNEYLVYLLEVQIAL--AERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169 L Q A R +A +LE + TR + G+ Sbjct: 117 PALNLLAAARAAQHQNNIAARDEYLAKAELEPLATKAVSTTRTRYL---------LQQGE 167 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKE----- 220 L A+ K S V + V Y ++W +A+ + ++K+ A + Sbjct: 168 LALAREELDKLNPTSKSKAPVIKLAVDLYKAQQDW-QALKLILPIASKKQIMADDIFKKL 226 Query: 221 -WNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + N A+L A S + +K S + ++ + + A L N+K Sbjct: 227 TFETNIALLKNAASTNEQELEKCWHWLSRSERKQAEYIAE--------YAIGLNRYNQKE 278 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 ++ +L+K K +P I + +L+ + V K+ L LE +++V+ V ++K+ + Sbjct: 279 QSIKLLQKQLKTSPSKAIFEALSQVLTPSDVEAKKQLLALEANFEDNVDYQVCLAKLYHQ 338 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 A A + LA +++ AL + Sbjct: 339 NHDYHNAKIWWQKACYLQDDISNLHALADVQEHQGE--------LNRALQTRRNAA 386 >gi|189188548|ref|XP_001930613.1| DNAJ domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972219|gb|EDU39718.1| DNAJ domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 728 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 80/247 (32%), Gaps = 24/247 (9%) Query: 88 LYTGLMSIAAHNI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 L G + N L + +S + + +L +I A+ + + A + Sbjct: 373 LMRGEAHLRMGNANALGEAQNVAMSLLRYNNQDPDALVLRGRILYAQGENDKAVQHFRQA 432 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L D +A +Y + A A + Sbjct: 433 LNCDP-----------------DFKTAVKYLRMVQKLDRLKSEGNAAF-----KAGRFQE 470 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 AI +Q + +L R+L ++ + + D ++L+L + A Sbjct: 471 AIDTYSQALAVDPSNKSTNSKILQNRALCHSRQKSWKQAIADCEKALELDPSYTKARKTR 530 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 AK+L +A L+ I + NP P IA E K K ++ I K++ Sbjct: 531 AKALGENGNWEEAVRDLKAIAEENPSEPGIAKEIRDAEMELKKSKRKDYYKILGIQKDAT 590 Query: 326 ESLVIVS 332 E+ + + Sbjct: 591 ETEIKKA 597 >gi|310822131|ref|YP_003954489.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395203|gb|ADO72662.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 837 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 34/297 (11%) Query: 98 HNIPLARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 ++ +A+ + Q N+Y ++ L Q L + A + A Sbjct: 173 GDVAIAKFQRYLAQRPQKLAVNDYQIHELIGQGHLMRKDVAAARASFQQAQAGRPESVTA 232 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L G A ++ P A E + + ++ + + A Q Sbjct: 233 QMGLASVLEMEGKDEEALALVEGLVERFPQAKEPKERLGRMFLRSGNVAGAE---TQALA 289 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 K A LL+ + + + + L++ + A I +K+L +Q + Sbjct: 290 LVKLEATPAARLLLGE--VRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRN 347 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLV 329 +A LE + + N+ + + R RL E+ + V Sbjct: 348 EEAIKYLEAALEA----DGGNLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHV 403 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 ++ G DQA A+++ P + W AL Sbjct: 404 LLGADHFATGQWDQAIEDYANALRVEP-----------------DHAGAQQWLAHAL 443 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 30/307 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-----LAERQYNIAHEKLEMMLQIPAT 152 + LA+K + E ++ QIA A+ + A + LE L+ Sbjct: 304 GEVRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRNEEAIKYLEAALEADGG 363 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 SL + R G A + ++++P + + +W +AI Sbjct: 364 NLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHVLLGADHFATGQWDQAIEDYA 423 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--- 269 + + + L A + + D DA+ L+ + ++ A + Sbjct: 424 NALRVEPDHAGAQQWLAHALAHRARGRADTNR-LDDAVRDLRRAYDLERSAAMARRLGAA 482 Query: 270 LISQNKKRKAEVILEKI-------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 L+ Q +A +LE+ W+ + Y HL N L+ ++ E+ + Sbjct: 483 LLEQRAFAQARPVLEQAVTLEGSTWREH----WMLGYAHLGEGNAEAALRAFIQAEKRTE 538 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI----------FLLLAQIEQANS 372 E + + AL + + + P K LL + + + Sbjct: 539 EPADLADVSVGAALAEVELGRVDDAVERLSEPGPSKAARQLAEANLPLMLLRRALTRLET 598 Query: 373 HNTDKIL 379 + + Sbjct: 599 ADVENAR 605 >gi|307314342|ref|ZP_07593949.1| cellulose synthase operon C domain protein [Escherichia coli W] gi|306906057|gb|EFN36577.1| cellulose synthase operon C domain protein [Escherichia coli W] gi|315062809|gb|ADT77136.1| cellulose synthase subunit [Escherichia coli W] gi|323376603|gb|ADX48871.1| cellulose synthase operon C domain protein [Escherichia coli KO11] Length = 1157 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 >gi|229138312|ref|ZP_04266907.1| hypothetical protein bcere0013_14330 [Bacillus cereus BDRD-ST26] gi|228645204|gb|EEL01441.1| hypothetical protein bcere0013_14330 [Bacillus cereus BDRD-ST26] Length = 434 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 189 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 190 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 240 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY + +K+ + S+ + A Sbjct: 241 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHKGIKVDELSVPFYVELANIAAKL 298 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 299 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 340 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 341 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|209886816|ref|YP_002290673.1| tetratricopeptide repeat domain protein [Oligotropha carboxidovorans OM5] gi|209875012|gb|ACI94808.1| tetratricopeptide repeat domain protein [Oligotropha carboxidovorans OM5] Length = 429 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 104/314 (33%), Gaps = 21/314 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHEKLEM--- 145 G ++ + LA ++ Q+ F ++ LL + A + + A + Sbjct: 43 GFVAKDRGDFTLAIRLFDEALQRGLFSDKQRGLLLYSRGVSNEALGRRDRALSDFDAAIA 102 Query: 146 -MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + + P+ + + R A + A ++P P V + Y + Sbjct: 103 LLPEFPSAYL--YRGIIWGDERE--YQRALQDFLTASKLNPGDPLVFNNLGNVYEKLGDL 158 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 RAI + ++ A R+ K D + D +++ L A + Sbjct: 159 DRAIENYGLAIRLRSDY----APAYYNRARTYVLKQDEERAIADYDKAIALQPTYEDAYV 214 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----IYTHLLSENTVGKLKRALRLEEI 320 A + + A L+ ++NP ++A +L E L R + Sbjct: 215 NRAVLYFFRRDIKSALADLDTAIRLNP-RDVAALSNRASVNLAIEKYAEALSDFDRALTV 273 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + + + + + L G++D A+++ P ++ I + + +D Sbjct: 274 DPGNAATYLGRGRAHLFSGAVDDGIEDFKTAVRLRPSNPYPVIWLHIARVHRGESD--RE 331 Query: 381 WTQSALHAMPDPLW 394 ++ + A W Sbjct: 332 EFEANVKAAKGEAW 345 >gi|125624131|ref|YP_001032614.1| hypothetical protein llmg_1310 [Lactococcus lactis subsp. cremoris MG1363] gi|124492939|emb|CAL97902.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070905|gb|ADJ60305.1| hypothetical protein LLNZ_06775 [Lactococcus lactis subsp. cremoris NZ9000] Length = 418 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 88/265 (33%), Gaps = 44/265 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 I ++K++ + +H +YL+ L +IA + A L + A+ Sbjct: 46 GFIDESQKIYDQIMSEHPESTDYLINL--AEIAEDNGNLDEALNYLYQIPVDDENYIAAL 103 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + GD +A +A ++S D+P +T A+ + Y ++S AIT K Sbjct: 104 VKIADLYQYEGDFETAISKLEEARELS-DSPLITFALAESYFEQGDYSAAITE-YAKL-- 159 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 R IL + GD Sbjct: 160 -----SERKILHETKISIYQRIGDS---------------------------YAQLGNFE 187 Query: 278 KAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A LEK ++ + PE IA +Y + +E + RLE+++ E + + ++ Sbjct: 188 NAISFLEKSFEFDEKPETLYKIALLYGEIHNETRA--IANFKRLEKMDVEFLNYELAYAQ 245 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358 + A A + P Sbjct: 246 TLEANQEFEAALEMAQKGLNKNPNA 270 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 23/198 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154 + A + + + + + L + + Y+ A + + + T+ Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 S+Y RIGD + A L+ S + E + + +L E I Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSFEFDEKPETLYKIALLYGE----IHNE 219 Query: 212 NQKKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + N K + L +A + + A+ A + L N++ A+K Sbjct: 220 TRAIANFKRLEKMDVEFLNYELAYAQTLEANQEFEAALEMAQKGLNKNPNAVPLLHFASK 279 Query: 269 SLISQNKKRKAEVILEKI 286 K AE L Sbjct: 280 ISFKLKDKAAAERYLMDA 297 >gi|254450665|ref|ZP_05064102.1| sulfotransferase [Octadecabacter antarcticus 238] gi|198265071|gb|EDY89341.1| sulfotransferase [Octadecabacter antarcticus 238] Length = 545 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 22/197 (11%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + +Y A + +L+ A+ + + + +A Y KAL +P P + Sbjct: 36 QRDGKYLEAERIYQTVLRTEPRNAQALNLMGTLAIEANETKTALDYFRKALRGAPRDPII 95 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + K+ +A +L + + + A+ + ++ G + + Sbjct: 96 NNNMGNLLLRLKQNEKARQYLLKALQAKPNF--VEALCNLGKAHRLLLNG--VEAERLLR 151 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------------------H 292 ++L S+MA A LI + A + E + +P Sbjct: 152 KALDFKPTSLMARQNLADLLIDNGQADAAADMFESLLSEDPGNLEALVGLAASRKFKTDA 211 Query: 293 PEIANIYTHLLSENTVG 309 PE+ I + ++T Sbjct: 212 PELGLILHRIKEQDTPD 228 >gi|89095046|ref|ZP_01167974.1| Tetratricopeptide [Oceanospirillum sp. MED92] gi|89080678|gb|EAR59922.1| Tetratricopeptide [Oceanospirillum sp. MED92] Length = 789 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 81/225 (36%), Gaps = 5/225 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y AH + LQI A+Y + + D RY + +++ PD A Sbjct: 41 GDYEAAHIEFRNALQINPNHVEALYEVTKVFEQKKDWAKIHRYLERVIELQPDHVDALVA 100 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++ +A+ + + A + R S+ GD +A+ESL Sbjct: 101 IGGIELTAQQLDKALERSEKAMRVAPGSAKVR----SFHSVVLFKLGDAEGGVREALESL 156 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTHLLSENTVGKLK 312 K+ +I A + A + A L + K N ++ + +N G + Sbjct: 157 KIDPENIDAILLLASERLKAGDSLGALDYLNEADKQDNILVQLMKVRAFNEQKNLAGATQ 216 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L + + + + ++K L G ++A A+ P Sbjct: 217 TFEELIKQYPQDEKYYLALAKQFLLFGEREKADQVLQRALTDLPD 261 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 100/271 (36%), Gaps = 15/271 (5%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A N+ + V + E +V L Q ++ + A L +L+ + Sbjct: 346 AGNLSSGDQYVKQVLVLDKSNQEAIV--LNAQRSMVKGDLAKAISTLREVLRDNPSSSVI 403 Query: 157 VYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L ++ G + A + ++A ++ + E+ + + +++++ + + + Sbjct: 404 L-GLLGQAHEAQGKIELALDHYSQAYEVDSGNKLILESYAKILLSQRQYTKLESVIEKYL 462 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A+ + A+ K + D I+ L + + A +L+ Q + Sbjct: 463 HLNP--RDINALKISAQVKLTLRKWGEAQAIADRIDKLNIEAD--EAEQIRGAALLGQKR 518 Query: 276 KRKAEVILEKIWKVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ E+ ++ + P + Y + + + E + ++ E+L + Sbjct: 519 NLESIEAFERAYEASQSKVKPMRALVGSYVAAKQIDNA--VSFLKSVLEKDTDNREALSL 576 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 ++++ + ++A + M P++ F Sbjct: 577 LAQVYFLIDKREEAEKLLVEGMNNYPKEGTF 607 >gi|313148721|ref|ZP_07810914.1| TPR-repeat-containing protein [Bacteroides fragilis 3_1_12] gi|313137488|gb|EFR54848.1| TPR-repeat-containing protein [Bacteroides fragilis 3_1_12] Length = 278 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 8/167 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + L I L + + A+ ++M + T + + Y R D A+ + Sbjct: 100 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 157 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L+I P + ++ ++ LNQ E A+L +AR+ D Sbjct: 158 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPE----DAVLYVARADVERDM 213 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L NS+ A + + Q KK +A+ EK Sbjct: 214 KHEDLALVDLDEAIRLAPNSVDAYLLRGDIYLDQKKKSQAKADFEKA 260 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 63/180 (35%), Gaps = 15/180 (8%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++A L Q + + N + A+L L G + +L + ++ + Sbjct: 44 AQAEDLLKQALR-LEPKNPHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILL 102 Query: 265 CAAKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALR 316 A + Q + KA + +K + + Y + L + +L R Sbjct: 103 NRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQR 157 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375 L EI+ ++ + ++ + + G ++ + P +++ A +E+ H Sbjct: 158 LLEIDPKNYNGRLGLATLEQKEGKFRESLDLLNQLLVEFPEDAVLYVARADVERDMKHED 217 >gi|88703968|ref|ZP_01101683.1| TPR domain protein [Congregibacter litoralis KT71] gi|88701795|gb|EAQ98899.1| TPR domain protein [Congregibacter litoralis KT71] Length = 923 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 88/296 (29%), Gaps = 42/296 (14%) Query: 89 YTGLMSIA-----AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHE 141 L+++ A ++ K ++ L+E + + A Sbjct: 403 TENLVALGSQQIVAGDLDAGLKQLEDALAGDPDNSLARERLIEARLVAQDLDGALEEASR 462 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 +E ++ +TR + + ++A+ +AL P + + VL Sbjct: 463 YVE--VEPDSTRALIFRGRVL--LQRQNTDAAREDFEEALRRDPASVPARGGLAAIAVLG 518 Query: 202 KEWSRAITFLNQKKKNAK-----------EWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ A + + + R ++ + + L A + + A Sbjct: 519 QDLEGAQSEFEKSLEANPGNLQSSLNLAVVLERRGELVEMEQVLSAAVEANPTAVAPRVA 578 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKVNPHPEIANIYTHLLSEN 306 + K + A A + L + R+ A L + + E+A + Sbjct: 579 LARKAMMDKQPA--IAIELLSVEEIARQKDVGALQTLTGAYVLAEQAELAQL-------- 628 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 A L E+ L + ++ + A + A+++AP Sbjct: 629 ------SAKELLELRPNDPMVLALSARADVLSQDFASAREQLESALEMAPNVSALR 678 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 98/303 (32%), Gaps = 47/303 (15%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFA 156 + A + + + + L +R A E L+ +++ R ++ Sbjct: 146 DEAKAALQRALAAGEADDNYIAFTQALV--SLQVDRDQETAQESLQSIVERDPKHARAWS 203 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L + + D +A+ Y KA +P +V+ V + A L++ + Sbjct: 204 LLGLL--AWQNRDFVAAEEYYEKAAAANPYRVGDRIQLVETQVRLGKADVASANLSKLET 261 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + R R+ D+G+ + + L + ++ A + A + NK Sbjct: 262 QLRNYPAIR----FLRAQLLFDEGNYEGAIDLFNQILSVSPDNPGALLLAGNANARINKL 317 Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR------------------ 313 A LE+ ++ P ++A + + +L R Sbjct: 318 PIARRHLERFLELQPGSTQAALQLAQVNALMGEPGRTEELARSLLEREADNQTALTLLAN 377 Query: 314 --------------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 +L ++ ES E+LV + + G +D + A+ P Sbjct: 378 ALAAQGMHAESAQVFKQLADLRPESTENLVALGSQQIVAGDLDAGLKQLEDALAGDPDNS 437 Query: 360 IFL 362 + Sbjct: 438 LAR 440 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 84/238 (35%), Gaps = 7/238 (2%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L Q+ + E +L+ A + A+ L G + + + D+ Sbjct: 339 LQLAQVNALMGEPGRTEELARSLLEREADNQTALTLLANALAAQGMHAESAQVFKQLADL 398 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P++ A+ Q ++A + + L + + R L+ AR D+ Sbjct: 399 RPESTENLVALGSQQIVAGDLDAGLKQLEDALAGDPDNSLARERLIEAR----LVAQDLD 454 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYT 300 + +A +++ +S A I + L+ + A E+ + +P A Sbjct: 455 GALEEASRYVEVEPDSTRALIFRGRVLLQRQNTDAAREDFEEALRRDPASVPARGGLAAI 514 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +L ++ G + E N +++S + ++ + G + + A++ P Sbjct: 515 AVLGQDLEGAQSEFEKSLEANPGNLQSSLNLAVVLERRGELVEMEQVLSAAVEANPTA 572 >gi|323452442|gb|EGB08316.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens] Length = 1151 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 82/269 (30%), Gaps = 21/269 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIP---ATR 153 + A++++ + L L + A E E +L P TR Sbjct: 142 GDPRGAKRLYLKAIALKPRFTDAYNNL--ASAHLHLGETREALETYEAALLVDPSLAETR 199 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 L G + A+ +AL +P+ A+ Y A + + Sbjct: 200 C----HLGHLHRAAGRRDVAEHCYAEALACAPNLAAAWCALAAIYKERGRLDDAAAYYRE 255 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + L ++G + A+ + +++L +A A + Sbjct: 256 AIRRKPSAFDAHSNL----GNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNLASCYFEK 311 Query: 274 NKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +A I + P+ P+ + N + + R + + + Sbjct: 312 GDLERAIRIFRVALDIEPNFPDACNNLGNALRE--HGDLEEAIACYRRALLLRPDHAHAH 369 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + G +++A A+ +APR Sbjct: 370 NNLGNAMKDKGLVNEAIQCYATAVGLAPR 398 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 94/308 (30%), Gaps = 17/308 (5%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + AA +A H Y N + I + + A ++ Sbjct: 203 GHLHRAAGRRDVAE--HCYAEALACAPNLAAAWCALAAIYKERGRLDDAAAYYREAIRRK 260 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + A +L G +++A +A++++P + Y + RAI Sbjct: 261 PSAFDAHSNLGNVLKEQGKVDAAIAEYARAIELNPGFAVAHGNLASCYFEKGDLERAIRI 320 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + +L + GD+ + +L L + A ++ Sbjct: 321 FRVALDIEPNFP--DACNNLGNAL--REHGDLEEAIACYRRALLLRPDHAHAHNNLGNAM 376 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325 + +A + P A +++L L ++ + Sbjct: 377 KDKGLVNEAIQCYATAVGLA--PRFAAAHSNLGLVLKERGTVDDALAHYREAIAVDPQFA 434 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFL-LLAQIEQANSHNTDKILYWTQ 383 ++ + ++G +D A A+K+ P + L A + H Y + Sbjct: 435 DAYSNMGNAYKDLGRLDDAIRCYGEALKLRPDFADACSNLAAAYKDGGRHAEAVACY--R 492 Query: 384 SALHAMPD 391 AL PD Sbjct: 493 RALELKPD 500 >gi|215488807|ref|YP_002331238.1| cellulose synthase subunit BcsC [Escherichia coli O127:H6 str. E2348/69] gi|215266879|emb|CAS11320.1| cellulose synthase subunit [Escherichia coli O127:H6 str. E2348/69] Length = 1157 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLAR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLAREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 >gi|124024089|ref|YP_001018396.1| hypothetical protein P9303_23981 [Prochlorococcus marinus str. MIT 9303] gi|123964375|gb|ABM79131.1| Hypothetical protein P9303_23981 [Prochlorococcus marinus str. MIT 9303] Length = 587 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 76/249 (30%), Gaps = 32/249 (12%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR 153 + A ++ ++ + L +I Q+ A + L+ P T Sbjct: 48 GQLQQAVELIQASIREDESNPIPFFNL--GKILAIAGQHENAVGVFQESLKRNQQIPETW 105 Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + R G A+R AL ++P + E A L Sbjct: 106 FC-----FANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR 160 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + E L+ + ++G+ + +++++ + A L Sbjct: 161 RALASNPE----DINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFEDAYFNLGLLLKE 216 Query: 273 -QNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-KLKRALR-----LE 318 + K +KA I K +V P+ Y +L++ +L A L Sbjct: 217 VEGKVEEASVFFQKAIAIYRKAIEVK--PDSGQAYVNLVTVLNKDGRLDEARVAIECLLS 274 Query: 319 EINKESVES 327 + +S Sbjct: 275 LKPPDDRQS 283 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 5/164 (3%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q R + A + +L + A++ L G L A ++ Sbjct: 9 QAYQ-GRDLDDAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESN 67 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P + + +A + A+ + K ++ A +L + G + Sbjct: 68 PIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIP--ETWFCFANAL--REIGKTEEAKR 123 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L+L A+ L + +AE +L + NP Sbjct: 124 AYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNP 167 >gi|301025865|ref|ZP_07189353.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] gi|300395794|gb|EFJ79332.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] Length = 1157 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYKNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYKNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|258592532|emb|CBE68841.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 2960 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 78/206 (37%), Gaps = 22/206 (10%) Query: 169 DLNSAQRY-----ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 D +A A++A + S P A+ + ++ + A T L + +A + Sbjct: 1591 DRIAALTLEVYNAASRACEASAPTPNTARAMNDRSEVSSRYETA-TILRYQSVSADSGDV 1649 Query: 224 NRAILLIA-------RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +++ A ++ ++ +GD A+ ++++L + + L+ Sbjct: 1650 QTSLVRSANVIEQIRQAEQHLAQGDPPAAAQALSQAVQLAPHDPELIVAHGNVLLQLGDV 1709 Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVI 330 A K + P H +A +Y H+ E ++R N +++L + Sbjct: 1710 EAARREFVKATVLAPDYPAAHLNLAAVYLHMGRGEEAEASIRRV---LAANSADIDALKL 1766 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ L+ +A + ++ AP Sbjct: 1767 LGRLCLDSARYTEAVESYLTVLRHAP 1792 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 51/131 (38%), Gaps = 9/131 (6%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ ++ +GD A+ ++++L + + L+ A K + P Sbjct: 690 QAEQHLAQGDPPAAAQALSQAVQLAPHDPELIVAHGNVLLQLGDVEAARREFVKATVLAP 749 Query: 292 -----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 H +A +Y H+ E ++R N +++L ++ ++ L+ +A Sbjct: 750 DYPAAHLNLAAVYLHMGRGEEAEASIRRV---LAANSADIDALKLLGRLCLDSARYTEAV 806 Query: 346 AKAMLAMKIAP 356 + ++ AP Sbjct: 807 ESYLTVLRHAP 817 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 7/170 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +Q++ + A L+Q + A + L++A GD+ A+ + +++ L Sbjct: 692 EQHLAQGDPPAAAQALSQAVQLAP----HDPELIVAHGNVLLQLGDVEAARREFVKATVL 747 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTV--GKLK 312 + A + A + + +AE + ++ N + + L ++ ++ Sbjct: 748 APDYPAAHLNLAAVYLHMGRGEEAEASIRRVLAANSADIDALKLLGRLCLDSARYTEAVE 807 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 L + VE+L+IV E+G DQA A + + P + Sbjct: 808 SYLTVLRHAPHDVETLLIVGNCYAEIGRFDQARAFYRKVLSLEPSNAVAT 857 >gi|260846319|ref|YP_003224097.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009] gi|257761466|dbj|BAI32963.1| cellulose synthase subunit [Escherichia coli O103:H2 str. 12009] Length = 1140 Score = 51.9 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721 Score = 36.8 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398 >gi|320536700|ref|ZP_08036711.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] gi|320146462|gb|EFW38067.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] Length = 576 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 6/132 (4%) Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLL 303 H + KL S++ + K Q KAE W++ P +P Sbjct: 171 LHRIQAAQKLMPESVLPAFLLGKYFELQGSSSKAETAYRLAWEIAPSCYPAGIQYDRFAA 230 Query: 304 SENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + + KR +L + +++E ++ ++I L++ +D A + +K P L Sbjct: 231 AGGNTEQAKRIGNQLLQRFPDNIEIFLLQAEIYLKLKDLDSAEPYIIEVLKRRPENTAAL 290 Query: 363 LL---AQIEQAN 371 LL IE+ Sbjct: 291 LLRIQILIERKE 302 >gi|293416975|ref|ZP_06659612.1| cellulose synthase operon protein C [Escherichia coli B185] gi|291431551|gb|EFF04536.1| cellulose synthase operon protein C [Escherichia coli B185] Length = 1157 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKSAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNA 218 GD ++A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKSAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKVIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 37.2 bits (85), Expect = 6.8, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|254250922|ref|ZP_04944240.1| hypothetical protein BDAG_00087 [Burkholderia dolosa AUO158] gi|124893531|gb|EAY67411.1| hypothetical protein BDAG_00087 [Burkholderia dolosa AUO158] Length = 765 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 79/261 (30%), Gaps = 28/261 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYA 177 L + + A E + + AT + +C++G + Sbjct: 22 RLNTALAHHQAGRLDDARVLYEAIRRDAPDHPDATHFLGL-----LACQLGQFPAGLALM 76 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ + D ++ AI + A + A Sbjct: 77 ERAIALRADPVYLNNFG-NMLRAHGRLDDAIAAYRRATALAPGY----AEAHSNLGNALR 131 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D D A+ +L L + A +L + + A +K ++ P A+ Sbjct: 132 DARDPDAAMLSCAHALALRPDYAPAYNNLGNALQDKGELDAAARAYDKAIALD--PAYAD 189 Query: 298 IY--------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ + + +RA+ L + + + + E G +D A A Sbjct: 190 ACFNQGNVFRAQGRLDDAIARYRRAIGL---QPQLHAAHHALGVLLFERGELDAAIASLR 246 Query: 350 LAMKIAPRKEIFLLLAQIEQA 370 A + +F L A +++A Sbjct: 247 CAAQSGEVDSLFNLAAALDRA 267 >gi|293453834|ref|ZP_06664253.1| cellulose synthase operon protein C [Escherichia coli B088] gi|291321960|gb|EFE61391.1| cellulose synthase operon protein C [Escherichia coli B088] Length = 1161 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 105/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 356 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 413 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 414 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 473 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 474 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 533 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + +M + A L Sbjct: 534 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVMET---ANRLRES 590 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 591 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 644 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 645 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 696 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 588 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 647 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 648 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 707 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 708 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 742 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 261 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 315 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 316 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 375 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 376 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 419 >gi|291286013|ref|YP_003502829.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus DSM 12809] gi|290883173|gb|ADD66873.1| Tetratricopeptide TPR_2 repeat protein [Denitrovibrio acetiphilus DSM 12809] Length = 533 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 90/240 (37%), Gaps = 18/240 (7%) Query: 127 VQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 +A +Y A E + YSL + G+ +A+++ + L I P Sbjct: 277 ANMAFERNEYAKAEEYFARAFEIDKDIQTA--YSLAIMAESAGETATAKKWYQEILTIRP 334 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D ++ + Y+ E A+T + + ++ + +R + + D G+ S Sbjct: 335 DFVEASKRLAIIYLKDGEPEEALTAVQKVGDIYQDVDYHRIV-----AQAYNDMGEHKKS 389 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYT 300 ++K + + A +L Q ++ AE +++ K P + +Y Sbjct: 390 IEVLTAAVKENPAEVKLYLDLALALDKQGDRKDAENVIKSGMKYFPDDASLLNFLGYVYA 449 Query: 301 H--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + + RAL+ N E L ++ + + G +A A+K+AP + Sbjct: 450 EQGVNLSDAEEMISRALK---QNPEEPAYLDSMAWVYYQQGKYQKAFDYQKRALKMAPDE 506 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 81/252 (32%), Gaps = 48/252 (19%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E+ IG A + +A IS D + EA + + AK+++ AI + K Sbjct: 111 MTETENIG---KAYKLYRQAYKISGDVIYA-EAEARAHASAKDFNSAIKIYSDLINIEKV 166 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + + R+ G + D I + L N I AS A I KA Sbjct: 167 SDY-----YVQRARYFEKLGLSKEALDDYISASDLDSNFI-ASAKLADHYIETGDNDKAI 220 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVI--------- 330 V L+K+ + + K + A L +I K E E Sbjct: 221 VYLKKV-------------IDASPDMVLAKFRLAQILSKIGKTEEAEGYFTAILDFLNES 267 Query: 331 --------VSKIALEMGSIDQAHAKAMLAMKIA---PRKEIFLLLAQIEQANSHNTDKIL 379 ++ +A E +A A +I ++A+ ++ T Sbjct: 268 EKIYVLKSLANMAFERNEYAKAEEYFARAFEIDKDIQTAYSLAIMAE----SAGETATAK 323 Query: 380 YWTQSALHAMPD 391 W Q L PD Sbjct: 324 KWYQEILTIRPD 335 >gi|307718566|ref|YP_003874098.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM 6192] gi|306532291|gb|ADN01825.1| hypothetical protein STHERM_c08780 [Spirochaeta thermophila DSM 6192] Length = 305 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 71/193 (36%), Gaps = 3/193 (1%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 +R + +Y + + + + +Y+ A LE +L+ + Sbjct: 42 EGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYDRAEALLEGLLERDPVNTMVLS 101 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L + GD ++A+ + +AL++SP + + + + + A+++ + + + Sbjct: 102 TLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARLRMEEGDVDEALSYAGEAYEIS 161 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + I R + +A A+ S + A A++ + + Sbjct: 162 PDKKEVLLLYAILRLESAPTDEEAVALGETALSSYPKDPYLLRA---LARAYEATQRYAD 218 Query: 279 AEVILEKIWKVNP 291 A +L + NP Sbjct: 219 ALTLLSTLTAANP 231 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 9/158 (5%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + D+GD + ++L+ ++ A++ I + +AE +LE Sbjct: 29 AEAYFSLGNAYYDEGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYDRAEALLEG 88 Query: 286 IWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + + +P +A ++ + +RAL L V L ++++ +E G Sbjct: 89 LLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELS---PGDVTILYNLARLRMEEG 145 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 +D+A + A A +I+P K+ LLL I + S TD+ Sbjct: 146 DVDEALSYAGEAYEISPDKKEVLLLYAILRLESAPTDE 183 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 68/237 (28%), Gaps = 41/237 (17%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----------------EWN 222 A PD ++ Y ++SRA+ Q + + E++ Sbjct: 21 ASSPRPDLAEAYFSLGNAYYDEGDFSRAVEAYTQALRFSPHTPRIEYNLARTYIRMGEYD 80 Query: 223 RNRAIL-------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 R A+L L + KGD + +L+L + A+ Sbjct: 81 RAEALLEGLLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARL 140 Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTV---GKLKRALRLEEINKESV 325 + + +A + ++++P E+ +Y L E+ + + Sbjct: 141 RMEEGDVDEALSYAGEAYEISPDKKEVLLLYAILRLESAPTDEEAVALGETALSSYPKDP 200 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI------EQANSHNT 375 L +++ A P + F L A++ E + Sbjct: 201 YLLRALARAYEATQRYADALTLLSTLTAANPEDPDAFFLRARLRLLYAGEVKEGLDD 257 >gi|254500721|ref|ZP_05112872.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii DFL-11] gi|222436792|gb|EEE43471.1| tetratricopeptide repeat domain protein [Labrenzia alexandrii DFL-11] Length = 616 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G ++A LD+SP P +++ + + A T L++ + Sbjct: 2 AGRNDNAALLYESILDVSPGHPEALSGLIETRLANGDLEGAQTLLSK----STAVTGQDP 57 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + + + +L L A++ A+ L S +AE +L + Sbjct: 58 GFLTLAAKISIISQKPDDAEKLVERALALDPYHAQAALLKAEFLASAGALSEAEDLLNTV 117 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 4/171 (2%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 LL+ + + + A + L + + + G Sbjct: 82 RALALDPYHAQAALLKAEFLASAGALSEAEDLLNTVRSRNTGDTDILLGISRLYYAYGLF 141 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A A +AL +PD ++ V Q + +A +F + KE ++ Sbjct: 142 SPALMIAQEALSNAPDDSNLSAFVGQILTALGDHGKATSFFEAA--HLKEPTNPE--FML 197 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A + A G + A + L + + A + K + + +A Sbjct: 198 ALANNAAAIGQSSEALRIAGRAKALFPDLMPAWLSYIKIKAERGEALEALR 248 Score = 36.8 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 2/127 (1%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 QI A + A E T + +L + IG + A R A +A + PD Sbjct: 166 GQILTALGDHGKATSFFEAAHLKEPTNPEFMLALANNAAAIGQSSEALRIAGRAKALFPD 225 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++ E A+ K AK+ R A L + + A + + Sbjct: 226 LMPAWLSYIKIKAERGEALEALREFAPVAKGAKD--RMDATLTLGTAYRLAGEPEKAIQL 283 Query: 247 HDAIESL 253 + + + Sbjct: 284 LEPLMAN 290 >gi|17231874|ref|NP_488422.1| hypothetical protein all4382 [Nostoc sp. PCC 7120] gi|17133518|dbj|BAB76081.1| all4382 [Nostoc sp. PCC 7120] Length = 311 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 63/209 (30%), Gaps = 16/209 (7%) Query: 88 LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 L GL +I A + A + + + L L Q + A Sbjct: 49 LNQGLQAIQAGRLQDAIAAFQSAIQLDPNLAAAHYNLGLALR-QTGQLQ---PAADAFYR 104 Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 P + E +L A Y +AL++ P + + + Sbjct: 105 ATQSDPNFALAFANLGGSLLE---GNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQ 161 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 W AI + + +K L + +G + + + +++K+ A Sbjct: 162 NWEGAIASFQKAVELSKNAPEPHYYL----GISYLQQGKLNEAKNAFNQAIKINPRYSEA 217 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291 L +Q + ++A K + NP Sbjct: 218 YYNLGVVLFNQGQPQEALTAFRKSAEANP 246 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 11/164 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + A AI + A L G + + + + N Sbjct: 56 IQAGRLQDAIAAFQSAIQLDPNL----AAAHYNLGLALRQTGQLQPAADAFYRATQSDPN 111 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313 +A SL+ N ++A L++ ++ P H + + +N G + Sbjct: 112 FALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLV--RQQQQNWEGAIAS 169 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E++K + E + L+ G +++A A+KI PR Sbjct: 170 FQKAVELSKNAPEPHYYLGISYLQQGKLNEAKNAFNQAIKINPR 213 >gi|332969682|gb|EGK08698.1| cell division protein FtsH [Desmospora sp. 8437] Length = 455 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 +E+LK + AA+ LI + + +LE+I + P+ ++ + Sbjct: 28 AVLEALKFSPENHPLKRHAAQLLIQAGRHEEGIRLLEEILEKESEPDTVHLLAQAWYDQG 87 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + K L+ + + + ++ +KIAL + +A + A++ P Sbjct: 88 QFR-KAEACLQRTGEPTPQMRMLAAKIALALEDAQEAADRYQEALEEDPS 136 >gi|218683091|ref|ZP_03530692.1| hypothetical protein RetlC8_30431 [Rhizobium etli CIAT 894] Length = 462 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 73/237 (30%), Gaps = 24/237 (10%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 L++ AT A +L R+G++ A + +AL + P+ P Sbjct: 204 IAGAVEEELRCYRKALELRATYPEAHNNLGILLKRLGNVVEAAEHYREALRLWPNYPEGH 263 Query: 192 -------EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + V + AI + + + A LL D + Sbjct: 264 YNYAILLQEVGDISCAETHYRDAIRL----RPDFVDARLRYAGLL-------EANDDPVE 312 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTH 301 ++ E L+L A+ L AE + + P+ A Y Sbjct: 313 THCQYREVLRLRPGFAEANNNYGVFLERMGDTADAEAHYVRA--LEHQPDYAEAHYNYAM 370 Query: 302 LLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 LL + + K VE+ ++ + E G + A + A+++ P Sbjct: 371 LLEPGDLRRAKEEYRAAIRARPNYVEAHNNLAVLLHENGDLPAAERHYLAALQLKPD 427 >gi|330988918|gb|EGH87021.1| cellulose synthase operon protein C [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1298 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 90/295 (30%), Gaps = 60/295 (20%) Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156 A + ++ N L L + + A+ Q A L + + P R Sbjct: 334 RATRQPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213 L + G L++AQ + L P ++ + A+ L+ Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + R +A+ + +GD+ A+ +++K +++ A+ + Sbjct: 450 GEQAKLGDSGRFKALRSAQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509 Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298 ++ KA V+++++ K P P++ + Sbjct: 510 TDEAPKAHVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569 Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + L RL+ + S E + ++ ++ G Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGE 624 Score = 36.8 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 89/289 (30%), Gaps = 61/289 (21%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL + A E L+I A A+ L + L A++ T+A A W Sbjct: 285 ALERNDHAAAEEAFAARLKIKADDVDALGGLGVVRQQQNRLPEAEQLLTRATRQPGGARW 344 Query: 190 ------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNR 223 + +A + +A L Q ++ + + Sbjct: 345 KNALENVQLWTSLQQAR-DLQA-KGQTGKAQALLAQAQRENPDNIDVRLTLADVQVQAGQ 402 Query: 224 NRAILLIARSLENADKGDM---------IASYHDAIESLKLCDNSIMA------------ 262 A R + + +G+ +A A E+L+L D Sbjct: 403 LDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSPGEQAKLGDSGRFK 462 Query: 263 ---SICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRA 314 S A+ + R A+ L+ K +P ++A +Y L ++ Sbjct: 463 ALRSAQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLY--LKTDEAPKAHVLI 520 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMKIAPRKEIF 361 L + ++++L + +++EMG A + + P + Sbjct: 521 DELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569 >gi|330721300|gb|EGG99385.1| hypothetical protein imdm_1171 [gamma proteobacterium IMCC2047] Length = 925 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 38/267 (14%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + +A AL + P+ Q YV ++ AI L+ Sbjct: 172 GLARIAMFEKAYETAAPLLENALKLEPNNFDALITQSQLYVAQQQPQAAIKPLDHALSLD 231 Query: 219 KEWNRNRA------------------------------ILLIARSLENADKGDMIASYHD 248 R + + +G A+ Sbjct: 232 PFLQSARVMRSELYVRTNQLDKARKDANTLLEQNPNNGLAHFILARLLLSEGKYKAAQTA 291 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303 + ++L+ +M S +Q +A+ LEK P IA +Y L Sbjct: 292 SEKALRAIPEHLMTHFILGASHYAQGNFERAQFYLEKFVAAQPSHLIANRLMGAVYLQLK 351 Query: 304 S-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + V L ++ N + + L ++ + L+ G ++ LA++I P E Sbjct: 352 DANSAVQLLDGFVQ--RTNTKDAQLLNLLGRAYLQAGDYNRGTEMLNLALEIDPAIENTR 409 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAM 389 I Q S + + + ++A+ Sbjct: 410 TQLAIGQIASGDINSAISELENAVTRP 436 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 108/318 (33%), Gaps = 45/318 (14%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A ++ Q+ + L+ LL + L YN E L + L+I E Sbjct: 352 DANSAVQLLDGFVQRTNTKDAQLLNLL-GRAYLQAGDYNRGTEMLNLALEIDPAIENTRT 410 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKN 217 L GD+NSA A+ PDA T ++ Y+ +++ A +++ Sbjct: 411 QLAIGQIASGDINSAISELENAVT-RPDATEQTNIMLILSYLNQQQYDNAFAAIDKAIAQ 469 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM---------------- 261 + L +++ ++ + A+ ++L + D I Sbjct: 470 YPKSP----AFLNLKAIAYENQQNTEAAREAYQQALAIDDQFIPALLALAKLEARNKQFD 525 Query: 262 AS------------------ICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYT 300 A+ + A+ N + LEK NP P + Sbjct: 526 AAKAHINNALKINKNHLQSHLLMAQIAGLNNNPKALVSSLEKARDGNPSAYQPVSLLVNY 585 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 +L + + V + A R + SL ++++++L D+A + + + + Sbjct: 586 YLQTNDLVKARREASRFYTAQGRNAGSLSLMARVSLAANEADKARSYLLEIIDSNEQDIN 645 Query: 361 FLL-LAQIEQANSHNTDK 377 L LAQ+E D Sbjct: 646 HRLQLAQLEINEKQYDDA 663 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 22/261 (8%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + +L+ A + L G +AQ + KAL P+ + Sbjct: 252 DKARKDANTLLEQNPNNGLAHFILARLLLSEGKYKAAQTASEKALRAIPEHLMTHFILGA 311 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + + RA +L + + L+ R + G + DA +++L Sbjct: 312 SHYAQGNFERAQFYLEKFVAAQP------SHLIANRLM-----GAVYLQLKDANSAVQLL 360 Query: 257 DNSIMAS--------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 D + + ++ + + +L +++P E + + Sbjct: 361 DGFVQRTNTKDAQLLNLLGRAYLQAGDYNRGTEMLNLALEIDPAIENTRTQLAIGQIASG 420 Query: 309 GKLKRALRLEEI--NKESVE-SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 LE ++ E + +++ L D A A A+ P+ FL L Sbjct: 421 DINSAISELENAVTRPDATEQTNIMLILSYLNQQQYDNAFAAIDKAIAQYPKSPAFLNLK 480 Query: 366 QIEQANSHNTDKILYWTQSAL 386 I N NT+ Q AL Sbjct: 481 AIAYENQQNTEAAREAYQQAL 501 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 3/134 (2%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + + + + +LKL N+ A I ++ ++Q + + A L+ Sbjct: 167 AYANVGLARIAMFEKAYETAAPLLENALKLEPNNFDALITQSQLYVAQQQPQAAIKPLDH 226 Query: 286 IWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++P + A + ++ + K A L E N + + I++++ L G Sbjct: 227 ALSLDPFLQSARVMRSELYVRTNQLDKARKDANTLLEQNPNNGLAHFILARLLLSEGKYK 286 Query: 343 QAHAKAMLAMKIAP 356 A + A++ P Sbjct: 287 AAQTASEKALRAIP 300 >gi|29169143|gb|AAO66317.1| adventurous gliding protein T [Myxococcus xanthus] Length = 478 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 7/224 (3%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y K + L+ A Y+L + R G L A+ + AL P +E + Sbjct: 75 DYPSLERKFQSALEADGNLAEADYNLGVLAERQGKLTEARNHYKTALTKKPSLRQASENL 134 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 A + A+ + + + ++RA L + +GD + +L Sbjct: 135 AVMEQNAGNVAGAVALYQEVLQRYPDDAQSRARL----AEIFRQQGDHTKAMDLTRAALM 190 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPEI--ANIYTHLLSENTVGKL 311 S A +S + + + A+++ L + PE+ A L + Sbjct: 191 RDPQSTTALKVMIRSYLDRKQLAMAKLVALRGVKLDAADPELHHAVGLILLQEGDVDDAR 250 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + E+ ++ V S V ++++AL + A ++ Sbjct: 251 LSFKKALEVREDYVPSHVELAQLALAAENYPTAEQHLRRILQAD 294 >gi|268317298|ref|YP_003291017.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262334832|gb|ACY48629.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] Length = 402 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 89/274 (32%), Gaps = 26/274 (9%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-YSLY 161 A+ + S +E +Y L+ ++ Q++ A + +LQ + ++L Sbjct: 53 AQALALADSAARYDSDEPAIYFLQGRLYAEMAQFDRAEAAYQEVLQRDP-NFRGIWHNLA 111 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 R A K L P AP +A+ + Y A Q + + Sbjct: 112 NLKARQHRFREAIALYQKELQRYPGAP-TWQAMARAYRELGVVDSAAYAYRQALQLDSTY 170 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-- 279 I + D+G + A + L ++ + + L+ + +A Sbjct: 171 ----VPAYIGMTQLLDDEGRFAEALTYAQRAQALDPDNPETNYLLGELLMKNGRFAEALP 226 Query: 280 --EVILEK-IWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEIN-------------K 322 + ++E W H + + E L+R +L E+N Sbjct: 227 YLQRVVEAWPWHAGAHYSLGQALLRVGRREEGEAALQRYEQLRELNAQVQMLEEAVRTTP 286 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + + G ++A +A+ ++P Sbjct: 287 DNPYAFAALGAALRRSGRYEEALRAYTIALFLSP 320 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 82/246 (33%), Gaps = 15/246 (6%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A LQ+ +T A + G A YA +A + P Sbjct: 143 MARAYRELGVVDSAAYAYRQALQLDSTYVPAYIGMTQLLDDEGRFAEALTYAQRAQALDP 202 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAILLIARSLENADKG 240 D P + + + ++ A+ +L + + ++ +A+L + R E Sbjct: 203 DNPETNYLLGELLMKNGRFAEALPYLQRVVEAWPWHAGAHYSLGQALLRVGRREEGEAAL 262 Query: 241 DMIASYHDAI-------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292 + E+++ ++ A +L + +A ++P + Sbjct: 263 QRYEQLRELNAQVQMLEEAVRTTPDNPYAFAALGAALRRSGRYEEALRAYTIALFLSPGN 322 Query: 293 PEIAN--IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 PEI N + + +T+ ++ R + + +++ + + + G A Sbjct: 323 PEILNNLAALYFVQGDTLAAMQTYRRALQADSTFIDAWLNLGVLHALRGERAAAAYAWRQ 382 Query: 351 AMKIAP 356 ++ P Sbjct: 383 VLRYDP 388 >gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413] gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 605 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 80/302 (26%), Gaps = 57/302 (18%) Query: 126 EVQIALAER-------QYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRY 176 + Q Y A + + P V +GD SA Sbjct: 282 DAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVR--ANIHRHLGDYPSALAD 339 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + L + P+ ++ AIT NQ + A R++ + Sbjct: 340 GNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNI----AEAYYGRAIAH 395 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D+I + D S+++ + A + + A + +N +++ Sbjct: 396 EALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINT--QLS 453 Query: 297 NIY-----------------------THLLSENTVGKLKRALRLEEI------------- 320 Y L E+ RA + Sbjct: 454 EAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADYTQS 513 Query: 321 ---NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTD 376 N E + L +G +++A A A+K P +LL A I + Sbjct: 514 IAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRADILRNRGDYQA 573 Query: 377 KI 378 I Sbjct: 574 AI 575 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 6/135 (4%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAKEWNRN 224 D +A +AL I+P Y+ ++ +AI + A N + Sbjct: 86 DFTAAIADYDQALQINPTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINED 145 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A R L N+D G+ + D ++L+ A + R+A E Sbjct: 146 IANAYYYRGLHNSDHGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHE 205 Query: 285 KIWKVNPHPEIANIY 299 + +++ P +A Y Sbjct: 206 RAVQLD--PNLAEAY 218 >gi|326387363|ref|ZP_08208972.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208019|gb|EGD58827.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] Length = 502 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 87/288 (30%), Gaps = 12/288 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + ++ A ++ + + IA + Q + A TR Sbjct: 163 LEGGDLDEADRV--LAIMRRLGPGRLDTLMTAGLIAQHKGQLDQASAAFRQAADRFRTRP 220 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + +L + G ++ A YA KA + +P P V VV+ EW + L Sbjct: 221 EPIVALADIADMQGHVDVAAGYAAKANERAPGDPQVEALVVRVAAEKGEWQKVRDIL--- 277 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ R +A + G + ++L L + A + A+S ++ Sbjct: 278 -APREDSLDVRTFEGLAYGEALLNLGRPEQARAIYAKALLLSPQNPYARLMLAESQLAAG 336 Query: 275 KKRKAEVILE----KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A + + ++A S+ G L ++ S S Sbjct: 337 ASADALRTVRPLADSVLAGQRELDLAVRAAQAASDPVAGAYAARLHSPQLAVNSALSGRA 396 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 ++ AL E+ +A+ E + + I Sbjct: 397 MA--ALARRDWPAVIEAYRAIPGYDNDAEVLKRMAEAETGLGRHDEAI 442 >gi|323182682|gb|EFZ68084.1| cellulose synthase operon protein C [Escherichia coli 1357] Length = 1157 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|193068462|ref|ZP_03049424.1| cellulose synthase operon protein C [Escherichia coli E110019] gi|192958113|gb|EDV88554.1| cellulose synthase operon protein C [Escherichia coli E110019] Length = 1157 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|166712375|ref|ZP_02243582.1| hypothetical protein Xoryp_13205 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 392 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 90/303 (29%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI + ++ + + + + N G + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEQVTGEPMGKLISQFECELADRNRGLGKTDDALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + S+ A I + + A E+ + +P P + Y + Sbjct: 208 IARAYHADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GDISG------ARNFLSEMTEHYRGIAPVLALTQLIEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L + A + L + + +P + G + W P K Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|78224407|ref|YP_386154.1| TPR repeat-containing protein [Geobacter metallireducens GS-15] gi|78195662|gb|ABB33429.1| TPR repeat protein [Geobacter metallireducens GS-15] Length = 643 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 91/277 (32%), Gaps = 47/277 (16%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E L+ L E Q A + A + ++++ Y+L R G ++ A Sbjct: 302 EALMRLAEAQTA--AGFDDEAITSYKELIRLKLGTGDTHYNLGVLYERKGLIDEAVVEYK 359 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 +A+ SPD + Y L + +AI + K N +L + + Sbjct: 360 QAIHSSPDNGDARRRLADIYALRGSYPQAIEQYRELLKKGD----NNPVLHLKLARALLG 415 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----------------- 281 + + ++LK+ +++ A A N+ +AE Sbjct: 416 AKNPKEAMASYQDALKIAPDNLEARRELAALYRKGNQNEEAEKQYKEILRIKKDDAEARN 475 Query: 282 -----------------ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319 +L+ ++ P H ++ IY + + + E Sbjct: 476 ILTALYVKSKKYDELITLLKDGVELAPNDPASHYKLGLIYEFKKDYDAAE--QEYKKAVE 533 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + +SL + +I L+ G I +A A K P Sbjct: 534 LKGDHAKSLNALGRIYLKTGKISEAKGALEAAKKADP 570 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 4/188 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + Y N +++L + L + A + L+I A L Sbjct: 387 QAIEQYRELLKKGDNNPVLHLKLARALLGAKNPKEAMASYQDALKIAPDNLEARRELAAL 446 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + A++ + L I D + YV +K++ IT L K+ E Sbjct: 447 YRKGNQNEEAEKQYKEILRIKKDDAEARNILTALYVKSKKYDELITLL----KDGVELAP 502 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N L K D A+ + ++++L + + + + K +A+ L Sbjct: 503 NDPASHYKLGLIYEFKKDYDAAEQEYKKAVELKGDHAKSLNALGRIYLKTGKISEAKGAL 562 Query: 284 EKIWKVNP 291 E K +P Sbjct: 563 EAAKKADP 570 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 70/254 (27%), Gaps = 68/254 (26%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 V L + R G + A + +AL + P P + + A+ L + Sbjct: 69 VRGL--RAERAGRHDEAIKDYREALRLEPAFPRAQGNLGLALLAKGSHDDAVVELTRAIS 126 Query: 217 NAKEWNRNRAILL-----------------------------IARSLENADKGDMIASYH 247 + + + + + + + G + + Sbjct: 127 SDPDPGYHHGLAMIFGQRKIYSLALYHYAEAAKGLPADPVIPTELAALYREMGKVSDAEK 186 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302 ++L L + A + A +++ + +A L++ +P +A Y Sbjct: 187 QYRKALSLSPSHEEARVGLASLYMAEGRTDRAIEELKQAQIASPGNKEVSSLLAEAYEKK 246 Query: 303 LSENTVG----------------KLKRALRLEEI----------------NKESVESLVI 330 +L+R L + + E+L+ Sbjct: 247 GDRQAADYQSLLAGKQRGVLSDERLRRGDELMQAKEYAKAAEEFKAALREKPDWPEALMR 306 Query: 331 VSKIALEMGSIDQA 344 +++ G D+A Sbjct: 307 LAEAQTAAGFDDEA 320 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 98/306 (32%), Gaps = 40/306 (13%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 Y + ++ + + + A ++ L + + E A L G Sbjct: 154 YAEAAKGLPADPVIPTELAALYREMGKVSDAEKQYRKALSLSPSHEEARVGLASLYMAEG 213 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA--ITFLNQKKKNAKEWNRNRA 226 + A +A SP V+ + + Y + A + L K++ R R Sbjct: 214 RTDRAIEELKQAQIASPGNKEVSSLLAEAYEKKGDRQAADYQSLLAGKQRGVLSDERLRR 273 Query: 227 ILLIARSLE-----------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS--- 272 + ++ E +K D + E+ +I + K LI Sbjct: 274 GDELMQAKEYAKAAEEFKAALREKPDWPEALMRLAEAQTAA-GFDDEAITSYKELIRLKL 332 Query: 273 -QNKK---------RKA---EVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLK 312 RK E ++E ++ P+ +A+IY L + ++ Sbjct: 333 GTGDTHYNLGVLYERKGLIDEAVVEYKQAIHSSPDNGDARRRLADIYA--LRGSYPQAIE 390 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + L + + + +++ L + +A A A+KIAP LA + + Sbjct: 391 QYRELLKKGDNNPVLHLKLARALLGAKNPKEAMASYQDALKIAPDNLEARRELAALYRKG 450 Query: 372 SHNTDK 377 + N + Sbjct: 451 NQNEEA 456 >gi|260582651|ref|ZP_05850440.1| tetratricopeptide domain-containing protein [Haemophilus influenzae NT127] gi|260094323|gb|EEW78222.1| tetratricopeptide domain-containing protein [Haemophilus influenzae NT127] Length = 396 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALLVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVKILENVLDQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + ++K+ E A AK + P IF + QI+ A Sbjct: 292 ELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339 >gi|190572244|ref|YP_001970089.1| putative transmembrane HemY porphyrin biosynthesis protein [Stenotrophomonas maltophilia K279a] gi|190010166|emb|CAQ43774.1| putative transmembrane HemY porphyrin biosynthesis protein [Stenotrophomonas maltophilia K279a] Length = 431 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 129/394 (32%), Gaps = 20/394 (5%) Query: 4 LIRYFFVISLVICSFIIVS----HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 L+ +++ + + + + +V++ +G Y ++ + + + LL+ Sbjct: 7 LVVLLLAVAIGVVAAQWLGADDLNRFGEVTLRYGGYDYHSNLPKVALLSVIAVLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 ++ + +G L GL + A K+ ++ Sbjct: 67 SLIAAPF-------RAWGRYRRKQGRVRLIDGLQAYEHGQWQRAEKLLDGAAKDPEVSAV 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178 L V+ A A L+ + + AT + + + + + D +A A Sbjct: 120 ALAN--AVRSAQARADGPAGEALLQRLGESDATLQALLRAEQLLARDLPVDAINALDVAA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P W+ + + A E + L Q K E N L A++L A Sbjct: 178 -IQPLPPRGLWLRTEALARAGRAHEAYGQLGALRQSKVLPAESNSELEARLAAQALLEAA 236 Query: 239 KGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + +A+ +A ++L+ + + A A ++ N A + LE+ E+ Sbjct: 237 DVNALAAQWEATPKALRPTPDVVGAYASRA---VALNWDEPALLALEQALDQRWDDELVA 293 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +Y L +E + R ++ S + ++AL D A A+ Sbjct: 294 LYGRLPAERLATRQANLARWRNVHDGSAALHLAQGRVALAQQQWDAADTFLHEAIAAGAG 353 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L ++ A +AL Sbjct: 354 APAWEALGEL-FAQRGEHALAAQCLANALRLQRG 386 >gi|119595584|gb|EAW75178.1| chromosome 20 open reading frame 14, isoform CRA_e [Homo sapiens] gi|119595585|gb|EAW75179.1| chromosome 20 open reading frame 14, isoform CRA_f [Homo sapiens] Length = 882 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 520 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 577 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 578 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 637 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 638 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 697 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 698 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 755 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 756 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 813 Query: 391 D 391 D Sbjct: 814 D 814 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 229 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 285 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 286 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 337 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 338 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 390 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 391 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 436 >gi|254520886|ref|ZP_05132941.1| tetratricopeptide repeat domain protein [Stenotrophomonas sp. SKA14] gi|219718477|gb|EED37002.1| tetratricopeptide repeat domain protein [Stenotrophomonas sp. SKA14] Length = 689 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 58/203 (28%), Gaps = 7/203 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A + A P + A+ L Q + A + Sbjct: 6 IQALRQNQADQAVQLAQAWTRDEPGLADAHRWLALALQQQGNAEAAMEALQQALRLAPD- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + + + + + L N+ A + A I +N +A+ Sbjct: 65 ---DAQLHLQHAGLLLALRQFEGADEALLRTTGLDPNAFSAYLMQAHLAIGRNDFDEAQR 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + +V P HPE+ I L + L + + L + L Sbjct: 122 LSTLAGRVEPEHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGK 181 Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361 + A +++ P Sbjct: 182 DMLAFAEQSFRRVLELNPSLSSL 204 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL + Q + A + + + A L + G+ +A +AL ++PD Sbjct: 8 ALRQNQADQAVQLAQAWTRDEPGLADAHRWLALALQQQGNAEAAMEALQQALRLAPDDAQ 67 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++ A L + + N A L+ ++ + D + + Sbjct: 68 LHLQHAGLLLALRQFEGADEALLR--TTGLDPNAFSAYLM--QAHLAIGRNDFDEAQRLS 123 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI-ANIYTHLLSEN 306 + ++ + + +A +L K P + A + +L + Sbjct: 124 TLAGRVEPEHPELLTIDGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDM 183 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + R+ E+N +V ++AL G++ A +A++ Sbjct: 184 LAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVPAAAEAVQVALQQ 231 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 41/270 (15%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQ------------------------------QHTFHNE 119 G++++ + A + S S+ + N Sbjct: 140 DGMVALRRGDADRALALLSAASKALPDDTRVLYALGFAYLGKDMLAFAEQSFRRVLELNP 199 Query: 120 YLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176 L L L VQ+AL + A E +++ LQ P A+ L E + R A + Sbjct: 200 SLSSLHGLVVQLALRQGNVPAAAEAVQVALQQPELDVPAMRRLAGELALRNSQPLQALDH 259 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 LD P+ V + ++ + A L+ + ++ + L ++E Sbjct: 260 LLPLLDTQPEDRQVLQLLLMSWQRLGREDEARARLDAVL---EAHDQLHDVWLARLAIEQ 316 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +A+ + ++ + A + ++ +AE I E+I + P Sbjct: 317 VGSAGAVAAVERWMAAM---PAHLPALEARLRLHDMVGERAQAEAIAERIVSLEPGRVSG 373 Query: 297 NIYT--HLLSENTVGKLKRALRLEEINKES 324 LL + + R L E E+ Sbjct: 374 ETRLVEGLLQRDPAAAVARVQALIEQAPEA 403 >gi|153006228|ref|YP_001380553.1| hypothetical protein Anae109_3385 [Anaeromyxobacter sp. Fw109-5] gi|152029801|gb|ABS27569.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 427 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 77/227 (33%), Gaps = 10/227 (4%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + K +L E Y+L + GDL A+ +AL P + Sbjct: 68 DWEHLERKWRAVLDAEEIPEA-RYNLGVALEQQGDLAGARAAYERALAAKPSLRHAAVNL 126 Query: 195 VQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A T ++ ++ + + R+ D+ ++ A E+L Sbjct: 127 GVLLEKQGDARAASTVYAAAVRDFPEDPIARERLAALYRASGQLDE-----AWRLAREAL 181 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSENTVGK 310 S+ A+ A+ + + + A +I + K+ P PE+ + VG Sbjct: 182 LRDPTSVGANKVLARVALQRGELDLANLIALRTQKLAPKDPELPFVAGLVLARRGDEVGA 241 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + + + + + + + A+ + A +++ PR Sbjct: 242 AAQYRKALALAGDYLPARHALLEAAIRNQAWGAVAEHASAILRVEPR 288 >gi|283787827|ref|YP_003367692.1| cellulose synthase operon protein C (TPR-repeat-containing protein) [Citrobacter rodentium ICC168] gi|282951281|emb|CBG90976.1| cellulose synthase operon protein C (TPR-repeat-containing protein) [Citrobacter rodentium ICC168] Length = 1232 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 7/196 (3%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + I T +AV L + D +A+RY + L + Sbjct: 424 QGDAALKANDIDQAERLYQQARNIDNTDSYAVLGLGDAAMARKDYPAAERYYQQTLRMDS 483 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI---LLIARSLENADKG 240 A + + ++ S I L+ ++ + + + R + L ++ +G Sbjct: 484 GNTNAVRGLANLYRQQSPEKASAFIATLSASQRRSID-DIERGLENDRLAQQAETLESQG 542 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299 + + L L S+ + A+ L ++ +A+ + + + P+ PE Y Sbjct: 543 NWAQAAELHRRRLALDPGSVWITYRLARDLWQAGQRSQADAQMSALARQKPNDPEQVYAY 602 Query: 300 THLLSENTVGKLKRAL 315 LS + A Sbjct: 603 GLYLSGAERDRAALAH 618 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 105/349 (30%), Gaps = 61/349 (17%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A++I A +++ + ++ L A+A + Y A + Sbjct: 419 WLAIQQGDAALKANDIDQAERLYQQARNIDNTDSYAVLGL--GDAAMARKDYPAAERYYQ 476 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ A +A Sbjct: 477 QTLRMDSGNTNAVRGLANLYRQQSPEKASAFIATLSASQRRSIDDIERGLENDRLAQQAE 536 Query: 182 DISPDAPWVTEAVVQQYVLAKE----WSR---AITFLNQKKKNAKEWN------------ 222 + W A + + LA + W A +++ + Sbjct: 537 TLESQGNWAQAAELHRRRLALDPGSVWITYRLARDLWQAGQRSQADAQMSALARQKPNDP 596 Query: 223 ---RNRAILLIARSLENADKGDMIASYHDAIESL--KLCDNSIMASIC-AAKSLISQNKK 276 + L + A + A + +L + + A L K+ Sbjct: 597 EQVYAYGLYLSGAERDRAALAHLNALPRSQWNANIQELAERLQSNQVLETANRLRDSGKE 656 Query: 277 RKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +AE +L + P ++ + + + L ++V++L+ ++ Sbjct: 657 AEAEALL----RQQPASTRLDLTLADWAQQRRDYATARGDYNRVLAR-EPDNVDALLGLT 711 Query: 333 KIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ + G A A L P + +A + Q +T Sbjct: 712 ELDIAQGDKAAARARLAKLPATAEPSISVQRRVA-LAQMQLGDTAAAKQ 759 >gi|240116510|ref|ZP_04730572.1| hypothetical protein NgonPID1_09811 [Neisseria gonorrhoeae PID18] gi|268602183|ref|ZP_06136350.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268586314|gb|EEZ50990.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] Length = 389 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 107/357 (29%), Gaps = 69/357 (19%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDA------PWVTEAVVQQYVLAKEWSRAITF 210 L+ + SA +A I + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQN---YQSA-GLVDRAEQIFLGLQDGEMVREARQHLLNIYQQDRDWEKAVET 167 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC----------- 256 + + + A + K + A+ A+E+ K C Sbjct: 168 AQLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIE 227 Query: 257 --DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL-- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 228 HRQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTG 277 Query: 312 --KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----L 364 + L+ IN +SL++ + +A A+ ++ P ++ L L Sbjct: 278 YMQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKL 329 Query: 365 AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + ++ A + D + L ++ + + S W P F Sbjct: 330 SDLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|268317849|ref|YP_003291568.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262335383|gb|ACY49180.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] Length = 785 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 83/287 (28%), Gaps = 54/287 (18%) Query: 125 LEVQIA----------LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L Q A LA Y A E L++ AT A + + + + A Sbjct: 23 LYAQSAAQLVDEGHDWLARGAYQEAEETYREALELDATYLPAYLGMIRLAMARENWHEAS 82 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----EWNRNRAILL 229 +A +AL I + V + ++ F ++++ + +L Sbjct: 83 DWAGRALKIDSSSLAVHYFLGISERERAQYQTPFQFTHRRESRKHFEWVLARDSLYRDVL 142 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKI 286 +L GD + A ++L + A+I + ++ A Sbjct: 143 YQYALLYRQDGDYPRAITLAEAQVRLRPDLEEAAIGLFRIYQSYLNHTDLDTAGR----- 197 Query: 287 WKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 W HP + A + +L+R +L D A Sbjct: 198 WLAQ-HPTDYARFF-------EAERLRRLGQL---------------------READAAL 228 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 P + I L+ A++ A + A+ + P Sbjct: 229 RTLERPDFPWPSQAIALIRARVWAALDRPD-SVQAIIDRAIRTINGP 274 >gi|254522242|ref|ZP_05134297.1| heat shock protein [Stenotrophomonas sp. SKA14] gi|219719833|gb|EED38358.1| heat shock protein [Stenotrophomonas sp. SKA14] Length = 392 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 19/299 (6%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ A R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVNRHDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ Y ++W +AI + + + + + G + + Sbjct: 148 ALKHLIGIYQAERDWEKAIDNATRFEDVTGEPMGKLIGQFECELAERFRGAGKLEEARAA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306 + + S+ A I + A E+ + +P PE+ + + Sbjct: 208 IARAYQADAMSVRAGIIEGRLETDAGNAEAAVRAFERAARNDPEYLPELLPAL--MANYR 265 Query: 307 TVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 VG L A E + + ++++ E + A A +K P Sbjct: 266 KVGDLAGARAFLSEMTEHYRGIAPVLALTRLMEEQEGVAPARAYLGRQLKDRPSVRGESA 325 Query: 364 LAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTLCY 417 L + A ++ L+ + + +P + G + W P K Sbjct: 326 LIDLTLAEGADSTATLHDLKHITDQLLVRNPAYRCTRCGFGARTHHWQ--CPSCKEWGT 382 >gi|262199117|ref|YP_003270326.1| hypothetical protein Hoch_5958 [Haliangium ochraceum DSM 14365] gi|262082464|gb|ACY18433.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365] Length = 2620 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 113/310 (36%), Gaps = 17/310 (5%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A+ R++ ++H E L LLE+ A + + ++ + Sbjct: 2301 ASGETGRTRELLVGWVERHPEDREPLYTLLEMDKASENWNGVLDICTRLVAIEEGEAQVK 2360 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A L + + A + A + P++ + + + + Y L+ + + T L Sbjct: 2361 AALELADAAEKTERPGEALQALETAHEAQPNSGELRDRLRRIYELSGAFDKLATVLLADG 2420 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 +A++ + A + G+ A+ A ++ L ++ L + Sbjct: 2421 DHAEDADVRYDAYRRAAEVLLFSLGNPQAAMVPAQKARDLKPEEHDGTVLYVDILTMSGE 2480 Query: 276 KRKAEVILEKIWKVNPH----PEIAN-----IYTHLLSENTVGKLKRALRLEEINKESVE 326 +A +LE+ + H P++A + + G+L ++++++ E Sbjct: 2481 TDRAIALLEEA--IGQHKRRSPQLAALKQRMARVAAVLGDRDGQLSWLKESFDVDRKNPE 2538 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-----AQIEQANSHNTDKILYW 381 ++++A E+G D A + + I ++ A+IE A N K W Sbjct: 2539 IAAELAQLATEVGDYDLALKPLRAITLMEDPQPITRVMAFLWEAKIEHA-RGNNAKAELW 2597 Query: 382 TQSALHAMPD 391 + AL P+ Sbjct: 2598 ARKALREDPE 2607 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 11/179 (6%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 ++G + L + + A + + + V L ++A + + Sbjct: 1702 RREQGIELLEKAFAAEPRYQQAGAS-LEKAAAAEPDSDR---VMALYERVARSAGDPQML 1757 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-------DAPWVTE 192 + LE Q V + A+ +A++ + A W Sbjct: 1758 LDFLERRAQRSDATPTQVREAVDVALAQNQAQRAEALLGRAVEAARSSDEGIAGAVWAVM 1817 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A+ + V +++ A +++ + A +R +L +A ADKG Y E Sbjct: 1818 ALAETRVATGDFASARELVHEAAEYADPEKFDRLVLDLAVKARGADKGLAAEMYELLRE 1876 >gi|167041671|gb|ABZ06416.1| putative TPR domain protein [uncultured marine microorganism HF4000_009L19] Length = 516 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 19/171 (11%), Positives = 55/171 (32%), Gaps = 4/171 (2%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L + + +Y A + ++ R +Y + S R+G+++ A+ + + S Sbjct: 337 LVARTSFRVGEYEKAIDYYRRLIDADPRRVQPLYQIGLASLRLGNVDDAREAFEQVVARS 396 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + + A+ + ++L + G Sbjct: 397 PTHVLAQFNLGMARFRSGDVGAALRNFQAA----SGLAGSDPVVLRQLGNAAVEAGQFWL 452 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + ++ A I A++ + + +A + ++ P ++ Sbjct: 453 ASDVLDRAVAASPTLASAWIDKARAHRAGGQIDRARESYTRALELEPTNDL 503 >gi|221134674|ref|ZP_03560977.1| sulfotransferase [Glaciecola sp. HTCC2999] Length = 655 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 83/260 (31%), Gaps = 21/260 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 YLL Q A E + A LQ + + L + ++ L+ AQ A Sbjct: 143 YLLAAQSAFYEGRLAKAETLTREFLQKNPSHVPGMRLLAKIAVKLNILDDAQILLENATV 202 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 I+P + + ++Q + +S+A Q A+ +A + + G+ Sbjct: 203 IAPHSTDLKLELIQVLQQRQLFSKAHELALQTYLENP----KHALSELAYANQCVAIGNT 258 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + L + + + + + KA + ++ P+ + Y L Sbjct: 259 AIAINHFTNVLSELTSHAAVYVQRGHAYKTIGEPDKAIADYVQASELK--PDFGDAYWSL 316 Query: 303 L-------SENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAHAKAMLA--- 351 S+ + +K L I + + K + QA + Sbjct: 317 ANLKTFVFSDAQINTMKTMLARPGIQPTDKYHICFALGKAFEDHQDYAQAFSYYEQGNTL 376 Query: 352 ----MKIAPRKEIFLLLAQI 367 ++ P + L AQI Sbjct: 377 KHQQLRYNPDETTQQLQAQI 396 >gi|332971134|gb|EGK10099.1| hypothetical protein HMPREF0476_0778 [Kingella kingae ATCC 23330] Length = 707 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 10/267 (3%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL +IA + + L+ + E A + + + A+ + +I Sbjct: 161 LLAGEIAHTQGDARTSLGLYLTTLKHSRSPEVAERA-MELAIQARAYPIAEAIYQQWQEI 219 Query: 184 SPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + + + + + E + L + + R +++A+ D Sbjct: 220 EPQSSPALRRLALGRALAVGEAEPVVQTLETVLAESNAEQQQRLFIMLAQMSVVQDDLAK 279 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEI---ANI 298 + +LK A+I A +LIS R+ + LE + + N E+ + Sbjct: 280 QVNQVAHRAALKY-PQLAEAAI--ADALISAANNRENDA-LEAVQRLANVDKELNYVTTL 335 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +LS+ R +K S V+ + + ++A K + P Sbjct: 336 ALGVLSQKHPEVFNRFFATTPADKLSNAWRVLEVESLITAKEFERAEQKLSGLLSDTPDS 395 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSA 385 ++ + A I A +L + A Sbjct: 396 RLYFMAASIAMAQEQEVQTVLGYLDKA 422 >gi|327540348|gb|EGF26934.1| hypothetical protein RBWH47_03973 [Rhodopirellula baltica WH47] Length = 903 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 7/218 (3%) Query: 165 CRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 GD A + +AL P ++ V++ L E A L + + A Sbjct: 106 LTQGDYADALQTYREALQRYPTSIALRYMGLDVLRFNGLHDEVGTAEADLFAQMQRAFAG 165 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQNKKRKAE 280 R L+ A D + ++ + + A + A+ I + + A Sbjct: 166 YITRDNLIAAGRFLTGRGEDARKVLEMFYDRVRDRDPDYLDAYLATAELAIRKGDFQVAA 225 Query: 281 VILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEM 338 L++ K+ P++ ++ + + + + IN + + SL +++ A++ Sbjct: 226 NTLQQALKLEEETPDLHHLLAKAMESSDGQAATEQIAIALRINPQHLPSLQWLAERAIDR 285 Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375 D+A A ++I P + + L+A I Sbjct: 286 ERYDEAKDVANQMLQINPHEPSAWALMAVISHLRGEYD 323 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 102/300 (34%), Gaps = 53/300 (17%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---------- 152 A + + +E LL Q L + Y A + LQ T Sbjct: 79 AAATTAASEVERGVWSERWPRLLI-QCQLTQGDYADALQTYREALQRYPTSIALRYMGLD 137 Query: 153 --REFAVY--------SLYFESCR-------IGDLNSAQRY-------ATKALDIS---- 184 R ++ L+ + R +L +A R+ A K L++ Sbjct: 138 VLRFNGLHDEVGTAEADLFAQMQRAFAGYITRDNLIAAGRFLTGRGEDARKVLEMFYDRV 197 Query: 185 ----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 PD A + + ++ A L Q K E L+A+++E Sbjct: 198 RDRDPDYLDAYLATAELAIRKGDFQVAANTLQQALK--LEEETPDLHHLLAKAME---SS 252 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299 D A+ +L++ + + A+ I + + +A+ + ++ ++NPH P + Sbjct: 253 DGQAATEQIAIALRINPQHLPSLQWLAERAIDRERYDEAKDVANQMLQINPHEPSAWALM 312 Query: 300 T---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 HL E V KL RA L +++ ++ + E + A LA+ P Sbjct: 313 AVISHLRGEYDVEKLMRAAALSTW-EQNPNVDHLIGRKLSEKYRFAEGAAYQNLALDADP 371 >gi|224121752|ref|XP_002330644.1| predicted protein [Populus trichocarpa] gi|222872248|gb|EEF09379.1| predicted protein [Populus trichocarpa] Length = 686 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 60/157 (38%), Gaps = 13/157 (8%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L ++ G+ A ++ A + P + + + +V + +RA L++ Sbjct: 184 GLVHKAL--GNTEKAMKFYRIAAFLRPKDSSLWKLLFSWHVEQGDIARAWKCLSKAISAD 241 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + L +L + GD + + +++C + A AAK ++ + ++ Sbjct: 242 PD----DISLRSLHALFYDELGDHQRAAESYEQIVRICPEDVEAIKTAAKMHLNCGQIKR 297 Query: 279 AEVILEKIWKVNPHPE-------IANIYTHLLSENTV 308 ILE K +P +A+++ + + N Sbjct: 298 CVGILEDYLKGHPSEADLSVIILLADVFMEIDAHNNA 334 >gi|15833664|ref|NP_312437.1| oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|217324905|ref|ZP_03440989.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. TW14588] gi|12518248|gb|AAG58671.1|AE005579_1 putative oxidoreductase subunit [Escherichia coli O157:H7 str. EDL933] gi|13363884|dbj|BAB37833.1| putative oxidoreductase subunit [Escherichia coli O157:H7 str. Sakai] gi|217321126|gb|EEC29550.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. TW14588] Length = 1002 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 197 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 254 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 255 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 314 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 315 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 374 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 375 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 431 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 432 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 485 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 486 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 537 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 429 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 488 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 489 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 548 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 549 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 583 Score = 36.8 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 102 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 156 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 157 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 216 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 217 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 260 >gi|224111978|ref|XP_002316041.1| predicted protein [Populus trichocarpa] gi|222865081|gb|EEF02212.1| predicted protein [Populus trichocarpa] Length = 546 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 18/267 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 N+ AR++ + + NEY+ LLE + +Y A + Sbjct: 189 GNVKKARQLLAKGLK-FCGGNEYVYQTLALLEAKA----NRYKQAQYLFRQATKCNPKSC 243 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + + + + A++ KA+ SP + +A L Sbjct: 244 ASWLAWAQLETQQENNLVARKLFEKAVQASPKNRFAWHVWGVFEANIGNIEKARKLLT-- 301 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 N A+LL + +L + ++ +L I + Sbjct: 302 --IGHALNPRDAVLLQSLALLEYRHSTANLARVLFRKASELDPRHQPVWIAWGWMEWKEG 359 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328 A + +K +N E A E G L A RL IN +S + Sbjct: 360 NISTARELYQKALSINTTTESAARCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTW 419 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +++ + G+ +A L + Sbjct: 420 MTWAQLEDDQGNSVRAEEIRNLYFQQR 446 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 77/235 (32%), Gaps = 14/235 (5%) Query: 170 LNSAQRYATK---ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 +A+ K A W AV++ + RA + ++ Sbjct: 122 TEAARAVYEKGCQATQGENPYVWQCWAVLENKM--GNIRRARELFDAA----TVADKRHV 175 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++ +G++ + + LK C + A N+ ++A+ + + Sbjct: 176 AAWHGWAILELKQGNVKKARQLLAKGLKFCGGNEYVYQTLALLEAKANRYKQAQYLFRQA 235 Query: 287 WKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K NP +A EN + K + + + ++ + + +G+I++ Sbjct: 236 TKCNPKSCASWLAWAQLETQQENNLVARKLFEKAVQASPKNRFAWHVWGVFEANIGNIEK 295 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA--LHAMPDPLWIS 396 A + + PR + L + + + + A L P+WI+ Sbjct: 296 ARKLLTIGHALNPRDAVLLQSLALLEYRHSTANLARVLFRKASELDPRHQPVWIA 350 Score = 36.5 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 69/227 (30%), Gaps = 7/227 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A E + A + + G++ A++ K L +V + Sbjct: 155 GNIRRARELFDAATVADKRHVAAWHGWAILELKQGNVKKARQLLAKGLKFCGGNEYVYQT 214 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A + +A Q K ++ A L LE + +++ + +++ Sbjct: 215 LALLEAKANRYKQAQYLFRQATKCNP---KSCASWLAWAQLETQQENNLV-ARKLFEKAV 270 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLLSENTVGKLK 312 + + A + KA +L +NP + L ++ L Sbjct: 271 QASPKNRFAWHVWGVFEANIGNIEKARKLLTIGHALNPRDAVLLQSLALLEYRHSTANLA 330 Query: 313 R--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 R + E++ + + + G+I A A+ I Sbjct: 331 RVLFRKASELDPRHQPVWIAWGWMEWKEGNISTARELYQKALSINTT 377 >gi|167519060|ref|XP_001743870.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777832|gb|EDQ91448.1| predicted protein [Monosiga brevicollis MX1] Length = 927 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 101/319 (31%), Gaps = 68/319 (21%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQI-PATREFAVYSL 160 AR +++ + +E LE E E L+ ++ P + Sbjct: 544 ARAVYAQALAVYKVDDE---LWLEAAFFEKEHGTRVSLEEHLQAAVRHCPQAEVLWLMG- 599 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + GD+ ++++ A + +P + + A ++ E+ RA L + + A Sbjct: 600 AKSAWNHGDVGTSRQILAAAFEANPGSEEIWLAAIKLESENNEYMRARKLLERARAKAGT 659 Query: 221 WNRNRAILLIA-------RSLENADKG----------------------DMIASYHDAIE 251 + ++L D D+ A+ E Sbjct: 660 ARVWMKSARLEWVLDDIPQALSLLDGAIQRFPDYFKYYLMKGQIYEQCKDIEAARQAFAE 719 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----------------- 294 LK + CAA+ +SQ +A +LE+ NP + Sbjct: 720 GLKATPKDVEVWRCAAELEVSQGNFTRARALLERGRTYNPKSDLLWLDSVRVERRAGNPQ 779 Query: 295 -----IANIYTH------LLSENTVGKLK---RALRLEEINK--ESVESLVIVSKIALEM 338 +A L +E+ + K R L+ K S E LV ++K+ L Sbjct: 780 AAETVLAKAMQDVPLSGKLWAESIAMQPKAGRRTKSLDASKKCGNSPEVLVALAKMFLSD 839 Query: 339 GSIDQAHAKAMLAMKIAPR 357 I +A A+K+ P Sbjct: 840 RKIAKARRWLNSAVKLDPD 858 >gi|115926273|ref|XP_001195612.1| PREDICTED: similar to Tetratricopeptide repeat protein 13 (TPR repeat protein 13) [Strongylocentrotus purpuratus] gi|115933272|ref|XP_787775.2| PREDICTED: similar to Tetratricopeptide repeat protein 13 (TPR repeat protein 13) [Strongylocentrotus purpuratus] Length = 940 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 72/221 (32%), Gaps = 33/221 (14%) Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEA-VVQQYVLA----KEWSRAI 208 + + I D T+A+++ P P W A V + S+AI Sbjct: 254 GMQHPLNAALAIQD-------FTRAIELDPRNPIGWEKRAEVFSTQGRNREAYGDISKAI 306 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 R A L R + +A+ D +ES+K + A Sbjct: 307 DL------------RPTAKLYKYRGYMMFKEEKYVAATKDLMESVKEDKTQVDVMHLLAI 354 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKE 323 SL Q K ++ I +K ++ P +A Y L + L + + Sbjct: 355 SLYHQGKLHESIRIFKKALEIKPDYVDVLRSLARAYREL--GDYENSLDSFNKALHYSPH 412 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 V+S+ + + G +A + + + P E+ + Sbjct: 413 HVQSIQLRGSLHYHTGKPREALSDFQFCLGLDPTNEVCRYM 453 >gi|307824180|ref|ZP_07654407.1| Sel1 domain protein repeat-containing protein [Methylobacter tundripaludum SV96] gi|307734964|gb|EFO05814.1| Sel1 domain protein repeat-containing protein [Methylobacter tundripaludum SV96] Length = 779 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 64/219 (29%), Gaps = 25/219 (11%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQYVLAKEWSRAIT 209 L DL Q + L + P W A+EW Sbjct: 321 LGSRLLKRRKLSSEDLERFQSMIERGLSLEPMDSFIWMLWAEYLDHSGQCEAQEW----- 375 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + + + +R + +AR L + + E+ + + + + A+ Sbjct: 376 VLRETARLFPDHEASR--VELARLLIRQGEVKYPEAERWLREAAERNPDREPSRVELARL 433 Query: 270 LISQNKKRK--AEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEI 320 LI Q + + AE L ++ + HP+ +A + + E Sbjct: 434 LIRQGEAKYPEAERWLLEV--ADRHPDNEQSRVELARLLIRQGEAKYPEAERWLREAVER 491 Query: 321 NKESVESLVIVSKIALEMGS--IDQAHAKAMLAMKIAPR 357 S V ++++ + G +A P Sbjct: 492 KSNDAPSRVELARLLIRQGEAKYPEAERWLREVADRHPD 530 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 81/226 (35%), Gaps = 15/226 (6%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE--WSRAITFLNQKKKNAKEWNRN 224 G + + + + PD + + + E + A +L + + + + Sbjct: 367 SGQCEAQEWVLRETARLFPDHEASRVELARLLIRQGEVKYPEAERWLREAAERNPDREPS 426 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK--AEVI 282 R + +AR L + + +E ++ + + A+ LI Q + + AE Sbjct: 427 R--VELARLLIRQGEAKYPEAERWLLEVADRHPDNEQSRVELARLLIRQGEAKYPEAERW 484 Query: 283 LEKIW--KVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L + K N P E+A + + + + + ++ +S V+++K+ + Sbjct: 485 LREAVERKSNDAPSRVELARLLIRQGEAKYPEAERWLREVADRHPDNEQSRVVLAKLLFK 544 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 +A +K P+ +L QI+ NT + W Sbjct: 545 QNKTPEAENLLTEFLKDYPKNSAKNILTQIKD----NTLDVSAWLD 586 >gi|15804991|ref|NP_290110.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 EDL933] Length = 1154 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 349 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 406 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 407 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 466 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 467 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 526 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 527 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 583 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 584 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 637 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 638 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 689 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 581 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 640 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 641 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 700 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 701 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 735 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 254 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 308 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 309 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 368 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 369 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 412 >gi|294624942|ref|ZP_06703595.1| cellulose synthase subunit C [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600742|gb|EFF44826.1| cellulose synthase subunit C [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 1203 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 5/164 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L + + A A A + +E +Q+ L GD +A+ KAL Sbjct: 53 QLQQAEAARARGDLAQARQLIEQAVQLLPNEPAGHVGLGDL-QAAGDPVAAEASYRKALS 111 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----ARSLENAD 238 D + +V Y A ++ + + +A+L AR+ + D Sbjct: 112 READNAGALQGLVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARARQLLD 171 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 GD +++ + ++ + A+ + +A + Sbjct: 172 AGDAVSAQTELEAAMVERPGDAWIRLDLARLYQQAGRPDQARSV 215 >gi|20092504|ref|NP_618579.1| TPR domain-containing protein [Methanosarcina acetivorans C2A] gi|19917772|gb|AAM07059.1| TPR-domain containing protein [Methanosarcina acetivorans C2A] Length = 1004 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 84/270 (31%), Gaps = 13/270 (4%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL A + ++ + L L + +Y A + E ++ Sbjct: 460 RGLAFAELGEYKEALQAFDRAARYSSGDVYPLACL--GITLICLGEYEEALQVFEQAEEL 517 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 +A + + + A + P + A + ++ Sbjct: 518 ----FYASVGAEKTGEPGEEREAEMSWTLDAAEKKPVLERLRTAKGFALDALGRYEASLE 573 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +K + I + L + + L A++ A + Sbjct: 574 AFESARKLSGNGK----IACSGKGLVFVHCEEWKKALEAFDTVLIFDPKDTPAAVMKAFA 629 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVE 326 LI + KA +LE++ + P++++ + + LK + E N +++ Sbjct: 630 LIRFQEFGKAIEVLERVTAEDKCPDLSSCLLGFACARQGDFDRALKAYRKAIEANPKNIH 689 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +++I +G+ A + ++ AP Sbjct: 690 ARNGLAEIYFRLGNSRGALKELEASIAEAP 719 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 25/138 (18%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R GD + A + KA++ +P + + Y A+ L A E +R Sbjct: 666 RQGDFDRALKAYRKAIEANPKNIHARNGLAEIYFRLGNSRGALKELEASIAEAPENAFSR 725 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-----------ASICAAKSLISQN 274 + + ++ +Y DA+ES L A A++ N Sbjct: 726 NL----KGRVELEE----QAYEDALESFGLALALDPEDQRLLLWDTYARYMYAEASFEGN 777 Query: 275 KKR------KAEVILEKI 286 R A LEK Sbjct: 778 NARFRHMLLAAAGKLEKA 795 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 72/256 (28%), Gaps = 39/256 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + E L + + A +G A + + KAL + P + E Sbjct: 147 GKSAEALKAFEETLALEPSHAGAWEGKAKAYLSLGRKREALKASEKALKLKPSSAEAWET 206 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ + A ++ + G + SL Sbjct: 207 QGKIMESIGKKEEALGAFERSL----VLEPMNAGNVMEKGKLLGSLGRYEEALEAFESSL 262 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + + A I K+L++ ++A L Sbjct: 263 WMDSSLSEAKIKRGKTLLALGNFQQA-------------------------------LDS 291 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--N 371 + E + E+ E+ L G +A A+ I P +++ I + Sbjct: 292 FRKNLEEDPENFENWGGTGSCFLAFGKYYEAMKAYEKALSIEPENS--CIMSGIGEIYYQ 349 Query: 372 SHNTDKILYWTQSALH 387 + + L + AL Sbjct: 350 LGDYSRALEAFEQALR 365 >gi|238920241|ref|YP_002933756.1| tetratricopeptide repeat protein [Edwardsiella ictaluri 93-146] gi|238869810|gb|ACR69521.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 389 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 81/270 (30%), Gaps = 39/270 (14%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ ++ +D + + Sbjct: 83 GEVDRAIRIHQSLMESASLSFEQRLLAVQQLGRDYMAAGLYDRAEEMFSQLIDEADFKVF 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W +AI + + K+ R+ A +L+ D+ + Sbjct: 143 ALQQLLLIHQATSDWHKAIDVAEKLVRLGKDQQRSEIAHFYCELALQAMGSDDLDRAQSL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE--KIWKVNPHPEIANIYTHL 302 ++ S+ + + + KA +LE K + P + Y Sbjct: 203 LKKATAADKGCARVSMMRGRVFQALGEPAKAVTAFSLVLEQDKAFVSEVLPLMEACY--- 259 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351 LE+ V + L +G + +A A Sbjct: 260 ------------QVLEQPAPWHDFLRRCVDEDAGASAELMLGQVIEAQEGLEAAQVYVSR 307 Query: 352 -MKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ P F L + A + Sbjct: 308 QLQRHPTMRAFHRLIDYQLAE-AEDGRARE 336 >gi|226506424|ref|NP_001147573.1| calcium ion binding protein [Zea mays] gi|195612268|gb|ACG27964.1| calcium ion binding protein [Zea mays] Length = 840 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 11/222 (4%) Query: 173 AQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A +A ++ P + A+ + L + + + Sbjct: 285 ALASFRRACELQPTDVRPHFRAGNCLYALGRHAEAKEEYLLALEAAEAGGSQSADILPQI 344 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW- 287 + + +G ++ + E+ LC + A +L + R AE LE+ Sbjct: 345 HVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIF 404 Query: 288 ----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + H ++ + H + E+ ++ ++ V++L + + ++ G + Sbjct: 405 LKEDYADAHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 A + I P L + +++ + A Sbjct: 463 AAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKDA 504 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 37/203 (18%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + E+ G + A + +A + P + + E+ A L + Sbjct: 349 GIAMEA--EGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLK 406 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 +++ A + +L G+ + + ++ L + A + + + Sbjct: 407 EDY--ADAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A A +YT +L I + + + L Sbjct: 463 A----------------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQ 491 Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361 G ++A A K+ R E++ Sbjct: 492 GESEEAKKALKDAFKMTQRVEVY 514 >gi|53804387|ref|YP_113968.1| TPR domain-containing protein [Methylococcus capsulatus str. Bath] gi|53758148|gb|AAU92439.1| TPR domain protein [Methylococcus capsulatus str. Bath] Length = 550 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 66/251 (26%), Gaps = 54/251 (21%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-------------------- 133 ++ A ++ LA + + L L +I LA+ Sbjct: 29 ALTAGDLALAERCCR--KALELQPDAALTRLHLARIRLAQRRLAEASECLERAEHSPGLD 86 Query: 134 --------------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 A +L +A +L R GDL A + Sbjct: 87 AKTLNRIGIVWLDLDDCARAETCFRSVLARDDAHAYAWCNLGIALQRKGDLGDALTCFRR 146 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL++ PD + A+ L + + A+ + D Sbjct: 147 ALELKPDFAEAMHNCGLLLRDLGRPAEALEILERALSLKPGF----ALAQTNIGVVLQDF 202 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G + ++L++ + A L+S + R+ W+ Y Sbjct: 203 GKFDDAIAAFDQALEMEPQCGDIHLTKAHLLLSVGRFREG-------WEEQ-------EY 248 Query: 300 THLLSENTVGK 310 L E + Sbjct: 249 RRLAPEFPRDR 259 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 55/166 (33%), Gaps = 30/166 (18%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNA 218 ++ GDL A+R KAL++ PDA + + + + + A L + + +A Sbjct: 28 QALTAGDLALAERCCRKALELQPDAALTRLHLARIRLAQRRLAEASECLERAEHSPGLDA 87 Query: 219 KEWNR--------------------------NRAILLIARSLENADKGDMIASYHDAIES 252 K NR A + KGD+ + + Sbjct: 88 KTLNRIGIVWLDLDDCARAETCFRSVLARDDAHAYAWCNLGIALQRKGDLGDALTCFRRA 147 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 L+L + A L + +A ILE+ + P +A Sbjct: 148 LELKPDFAEAMHNCGLLLRDLGRPAEALEILERALSLKPGFALAQT 193 >gi|313216894|emb|CBY38113.1| unnamed protein product [Oikopleura dioica] Length = 398 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 74/202 (36%), Gaps = 7/202 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E + +Q +T A +L + GD+ A KA+ + Sbjct: 185 GRLEEAEECYQKAIQCNSTFAVAYSNLGCVYNQRGDIWLAIHNFEKAVKLDVTFLDAFIN 244 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ + RA++ + N A++ + ++G + + ++ Sbjct: 245 LGNMFKEARIFDRAVSAYQRALA----LNVGHAVVHGNLASVYYEQGRLDLAIETYRIAI 300 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGK 310 +L N A A +L + +AE E+ K++P H + N ++ E T Sbjct: 301 RLQPNFPDAYCNLANALKDRLLVSEAESCYEQALKLHPEHADSLNNLANIKREQNRTHEA 360 Query: 311 LKRALRLEEINKESVESLVIVS 332 ++ R + + + ++ Sbjct: 361 MELYQRALKAKPDFPAAHSNLA 382 >gi|224028305|gb|ACN33228.1| unknown [Zea mays] Length = 840 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 11/222 (4%) Query: 173 AQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A +A ++ P + A+ + L + + + Sbjct: 285 ALASFRRACELQPTDVRPHFRAGNCLYALGRHAEAKEEYLLALEAAEAGGSQSADILPQI 344 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW- 287 + + +G ++ + E+ LC + A +L + R AE LE+ Sbjct: 345 HVNLGIAMEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIF 404 Query: 288 ----KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + H ++ + H + E+ ++ ++ V++L + + ++ G + Sbjct: 405 LKEDYADAHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 A + I P L + +++ + A Sbjct: 463 AAEMYTRVLSIRPNHWRAQLNKAVALLGQGESEEAKKALKDA 504 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 37/203 (18%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + E+ G + A + +A + P + + E+ A L + Sbjct: 349 GIAMEA--EGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLK 406 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 +++ A + +L G+ + + ++ L + A + + + Sbjct: 407 EDY--ADAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVR 462 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A A +YT +L I + + + L Sbjct: 463 A----------------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQ 491 Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361 G ++A A K+ R E++ Sbjct: 492 GESEEAKKALKDAFKMTQRVEVY 514 >gi|114683095|ref|XP_001151987.1| PREDICTED: PRP6 pre-mRNA processing factor 6 homolog isoform 2 [Pan troglodytes] Length = 809 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 447 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 504 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 505 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 564 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 565 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 624 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 625 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 682 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 683 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 740 Query: 391 D 391 D Sbjct: 741 D 741 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 156 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 212 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 213 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 264 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 265 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 317 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 318 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 363 >gi|54294309|ref|YP_126724.1| hypothetical protein lpl1374 [Legionella pneumophila str. Lens] gi|53754141|emb|CAH15614.1| hypothetical protein lpl1374 [Legionella pneumophila str. Lens] gi|307610126|emb|CBW99672.1| hypothetical protein LPW_14401 [Legionella pneumophila 130b] Length = 389 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 21/204 (10%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 93 MSIAA-----HNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKL 143 +++ + + A ++H + + E L+ L Q ++ ++ A Sbjct: 73 LALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMAL--GQDYMSAGVFDRAERIF 130 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +++ G ++ + ++ Y K Sbjct: 131 LEVVE------LG-----------GSRETS----------------SLQGLLAIYQQEKA 157 Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 W +A+ + + + ++ A + + M + + +++ + S+ A Sbjct: 158 WEKALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRA 217 Query: 263 SICAAKSLISQNKKRKAEVILEKI 286 S+ A I + + ++A L+++ Sbjct: 218 SLMNATIEIKEGRYKQAIRSLKRV 241 >gi|281180568|dbj|BAI56898.1| putative cellulose synthase [Escherichia coli SE15] Length = 1157 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEALL----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEALLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPMQALETYKDAM 738 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|302841825|ref|XP_002952457.1| hypothetical protein VOLCADRAFT_62457 [Volvox carteri f. nagariensis] gi|300262393|gb|EFJ46600.1| hypothetical protein VOLCADRAFT_62457 [Volvox carteri f. nagariensis] Length = 914 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 97/310 (31%), Gaps = 48/310 (15%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + L L A + + +IP +V L+ + Sbjct: 370 AKALLARGVAQLPESTKLWMAAAKLETDDTAKARVLRKALERIP----TSVR-LWKAAVE 424 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + + + A+ ++A++ P A + A+ + + A LN +K Sbjct: 425 LAEEDDARILLSRAVECCPQAVELWLALARLET----YENARKVLNNARKAVPTEPAIWI 480 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 A++G + AI+SL S + + + + E Sbjct: 481 TAAKLEEANGAEQGQVDKIVARAIKSL-----STNGVVIHRDAWMKEA---------ENA 526 Query: 287 WKVNPHP-----------------EIANIYTHLLS--ENTVGK--LKRALRLEEINKESV 325 + P P + A++ L++ E+ + ++ A L + Sbjct: 527 ERSTPAPHVLTCRAIVRTVYSLGVDAADLEATLVADAEDAAKRGSVETARALYSQALTTF 586 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQANSHNTDKILYW 381 S + + A ++ + A+ ++ A P+ E+ L+A E + D Sbjct: 587 PSQPHIWRQAAQLEKGHGSRAQLDELLRRAVQFCPQAEVLWLMAAKEAWLGGDVDGSRAI 646 Query: 382 TQSALHAMPD 391 A A PD Sbjct: 647 LARAFAANPD 656 Score = 43.4 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 84/226 (37%), Gaps = 27/226 (11%) Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A+ + +P W+ A +++ +A + + A + + + + Sbjct: 302 DIKKARHLLKSVIQTNPRHAPGWIAAARLEE--VAGKLADARKLI---MQGCELCPNSED 356 Query: 227 ILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 I L A L+ D + + A ES KL AA L + KA +L Sbjct: 357 IWLEAARLQTPDNAKALLARGVAQLPESTKL--------WMAAAKL-ETDDTAKA-RVLR 406 Query: 285 KIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K + P + L E+ L R E ++VE + ++++ + + Sbjct: 407 KALERIPTSVRLWKAAVELAEEDDARIL--LSRAVECCPQAVELWLALARL----ETYEN 460 Query: 344 AHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388 A A K P + I++ A++E+AN ++ A+ + Sbjct: 461 ARKVLNNARKAVPTEPAIWITAAKLEEANGAEQGQVDKIVARAIKS 506 >gi|221638180|ref|YP_002524442.1| hypothetical protein RSKD131_0081 [Rhodobacter sphaeroides KD131] gi|332560205|ref|ZP_08414527.1| TPR repeat-containing protein precursor [Rhodobacter sphaeroides WS8N] gi|221158961|gb|ACL99940.1| TPR repeat-containing protein precursor [Rhodobacter sphaeroides KD131] gi|332277917|gb|EGJ23232.1| TPR repeat-containing protein precursor [Rhodobacter sphaeroides WS8N] Length = 566 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 7/238 (2%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L + + + + H + LL QI + Q+ +A E + Sbjct: 262 LAGALSGEVDDGSTLLYARTATHLRPDHTEALLLSAQILDNQGQHQLASETYARIPTADP 321 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A G + ++ P+ V A+ + ++ A+ Sbjct: 322 MFFVAEIGRADALRADGKIEASLEVLQGLARSKPELMQVHLALGDALRREERYADAVKAY 381 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + R L +R + + + D +L+L + S + Sbjct: 382 DAAIARVPAPERQHWPLFYSRGICHERLSHWKEAEADFRRALELNPDEPQVLNYLGYSFV 441 Query: 272 SQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTVGKLKRALRLEEINK 322 + +A ++E+ P +A Y L ++ V +++A LE ++ Sbjct: 442 DRGQNLEEALSMIERAVAARPESGYIIDSLAWAYFRLGRYQDAVEPMEKASLLEPVDP 499 >gi|95929293|ref|ZP_01312037.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95134791|gb|EAT16446.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 576 Score = 51.5 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 82/206 (39%), Gaps = 12/206 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + ++ A + +++ + AI L + ++ L + + Sbjct: 45 EEQQRYQRAQAYLAYADARLHLIDGDVDAAIEALQRAV----TFDDQSPYLFAVLASIHL 100 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D+G + ++L L + + + + A +Q K +A ++ ++ HP+I + Sbjct: 101 DRGQTQQAQDYLNQALVLEPHHLASELMLADVYHAQGKTDQAIQAFRQV--LDRHPDIED 158 Query: 298 IYTHL-LSENTVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y H+ ++ +A ++ + +SV+ L+ ++ + G QA A+ Sbjct: 159 VYLHISRLYLSLQAYDKAEQILLQWLKRQPQSVDGLMELANLYRLRGDYQQAITTYRQAI 218 Query: 353 KIAP-RKEIFLLLAQIEQANSHNTDK 377 ++ P + I+L L ++ + + Sbjct: 219 ELTPHDRRIYLPLGRLLEQQRQFDEA 244 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 47/373 (12%), Positives = 109/373 (29%), Gaps = 72/373 (19%) Query: 40 SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD-KGYKALYTGLMSIAAH 98 S + + +F + + +LL + P+ L +R + Y A + + Sbjct: 10 SFWRFVPGRFFLIGSLLLLMMTACSLPPKPSPLSVEEQQRYQRAQAYLAYADARLHLIDG 69 Query: 99 NIPLARKMHSYV--------------------------------SQQHTFHNEYLVYLLE 126 ++ A + + L+ Sbjct: 70 DVDAAIEALQRAVTFDDQSPYLFAVLASIHLDRGQTQQAQDYLNQALVLEPHHLASELML 129 Query: 127 VQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ + + A + +L P + + + + + A++ + L P Sbjct: 130 ADVYHAQGKTDQAIQAFRQVLDRHPDIEDVYL-HISRLYLSLQAYDKAEQILLQWLKRQP 188 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + Y L ++ +AIT Q + + R L + R LE + D + Sbjct: 189 QSVDGLMELANLYRLRGDYQQAITTYRQAIE--LTPHDRRIYLPLGRLLEQQRQFD--EA 244 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 E+ + ++ + LI Q + +A Sbjct: 245 LTLYDEAARQTEDQAYFDHLGSTLLIEQGRYSEA-------------------------- 278 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLL 363 L+R + + + VE+L + I +E+ +A + A+ P + + L Sbjct: 279 -----LQRVESIVQHDPADVEALGKLGYIYIELERWSEAESMFRQALPYHPVSSQLFYWL 333 Query: 364 LAQIEQANSHNTD 376 +E Sbjct: 334 AFALEHQQRWEEA 346 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 40/126 (31%), Gaps = 6/126 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE-WSRAITFLNQKKKNAKEWNRNR 225 G + ++ + L ++P + Y + E A+ + + A Sbjct: 442 RGLRDRTEQLMRETLTLNPQHVGALNHLAYIYAESGEHLDEALEMARKAAQLAPHAAVLD 501 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + + L GD + +++K ++ A ++A+ I K Sbjct: 502 TLGWVYYQL-----GDYEQAREPLEQAVKKSPEDVLILEHLADLYRKLLLTQEAQRIYRK 556 Query: 286 IWKVNP 291 ++ P Sbjct: 557 ALELQP 562 >gi|88602287|ref|YP_502465.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1] gi|88187749|gb|ABD40746.1| TPR repeat [Methanospirillum hungatei JF-1] Length = 634 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 30/243 (12%), Positives = 77/243 (31%), Gaps = 18/243 (7%) Query: 129 IALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 L A E +++ +R + + +G A KA++++P+ Sbjct: 144 AQLLNTDSESALESFNKAIELMPDGSRAYYWKGITL--SDLGQPEEALTAYEKAIELNPE 201 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-------- 238 A ++ A NQ +++ L + + D Sbjct: 202 FKDALYAKGIAESALGKFDEAEATFNQVLTIEGDYS--EPFLTVGSDSDVWDRKGRILFE 259 Query: 239 -KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + + + ++++L + A + L Q A + +P +A+ Sbjct: 260 VRNNPDEALTAFNKAVELNPYNANALYYKGRVLYDQGDLTGAMEAFTAASEADPQMGVAH 319 Query: 298 IY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + ++ + G + E+N ++ + + + GS D+A +++ Sbjct: 320 YWKGQVYIDQSDRSGAIAEFRTATELNPNLADAWYYLGGLLSDEGSYDEATTALDKMIEL 379 Query: 355 APR 357 P Sbjct: 380 RPD 382 Score = 39.1 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 89/279 (31%), Gaps = 19/279 (6%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + ++ + A E + A Y D + A A +++P Sbjct: 288 KGRVLYDQGDLTGAMEAFTAASEADPQMGVAHYWKGQVYIDQSDRSGAIAEFRTATELNP 347 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIA 244 + + + A T L++ + + + L LEN Sbjct: 348 NLADAWYYLGGLLSDEGSYDEATTALDKMIELRPDLADPYYLKGLTQYQLENYQDAADSL 407 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNPHPEIA-NIYTHL 302 A+ + ++ ++ + QN+ + A K ++N +A N Y + Sbjct: 408 EQATALNASQMTEDDRSKAYYTLGLARVQNEDNQGASEAFAKAVELNATNAVAWNDYGVV 467 Query: 303 LS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L+ EN LK +I+ E +++ +D+A A A+ I P Sbjct: 468 LNELENYEEALKAFNEAIKISDSEAEYYYNQGTTLVKLDKLDEAIAAFDKAVAIEPSPRA 527 Query: 361 FLL--LAQI-----EQANSH-------NTDKILYWTQSA 385 +L LA I E+A + K W Q A Sbjct: 528 YLAKGLALITQENFEEALKAFESAIALDDTKADLWAQKA 566 >gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120] gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120] Length = 280 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 50/160 (31%), Gaps = 8/160 (5%) Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A E + P F S GD A +A+ +SP+ Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASL--GDNAGAITDYNEAIRLSPN 159 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ NQ + ++ AI R A +GD + Sbjct: 160 YAEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKY----AIAYNNRGNARASQGDRQGAI 215 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 D ++++L N A + +Q ++ A L+K Sbjct: 216 SDYNQAIRLNSNFGPAYNNRGNARAAQGDRQGALEDLQKA 255 >gi|313680559|ref|YP_004058298.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus profundus DSM 14977] gi|313153274|gb|ADR37125.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus profundus DSM 14977] Length = 500 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 98/281 (34%), Gaps = 10/281 (3%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAE-RQYN 137 N D+G+ A + L I R + + + LL + + + + Sbjct: 213 NRDRGHVAAVSLLADIFVGQGLTDRALRELDRSLQAVDDPAVRANLLLKKAMVLKPTDPD 272 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A + L+ ++ + A Y L R GD + A KA + PD P + + Sbjct: 273 RASQLLQEATRLDSRLWQAHYDLGTHWLRAGDADRALVAFQKAYSVKPDEPRILVGLAAA 332 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y K++ +A + A+ R A+L+ +S G + ++++ L Sbjct: 333 YFQKKDYKQASRYAKLAAAAAQGDVRADALLVAGKSAYRL--GRYGEARALLLQAVDLVP 390 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKR 313 + A + + + A LE+ +++P P + Y + ++ Sbjct: 391 DRAEAWLWLGLAAYALQDLDTAVPALERAVQLDPSPVARLNLGAAYLASKRFSDAEQV-- 448 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ + + E+ + + +A A+++ Sbjct: 449 LTQVVLEDPNNAEAWYNLGWALKALARESEAQRAWKRALEL 489 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 7/232 (3%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G A Y K L+ + +V RA+ L++ + + RA Sbjct: 198 AGKPKEAIPYLYKVLNRDRGHVAAVSLLADIFVGQGLTDRALRELDRSLQAVDDPAV-RA 256 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LL+ +++ D + E+ +L A + +A V +K Sbjct: 257 NLLLKKAM-VLKPTDPDRASQLLQEATRLDSRLWQAHYDLGTHWLRAGDADRALVAFQKA 315 Query: 287 WKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + V P P +A Y + + ++L++ K A +G Sbjct: 316 YSVKPDEPRILVGLAAAYFQKKDYKQASRYAKLAAAAAQGDVRADALLVAGKSAYRLGRY 375 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +A A + A+ + P + L + + D + + A+ P P+ Sbjct: 376 GEARALLLQAVDLVPDRAEAWLWLGLAAYALQDLDTAVPALERAVQLDPSPV 427 >gi|289207918|ref|YP_003459984.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio sp. K90mix] gi|288943549|gb|ADC71248.1| type IV pilus biogenesis/stability protein PilW [Thioalkalivibrio sp. K90mix] Length = 256 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 39/280 (13%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ +A + + + N L L E + + A L+ L+ Sbjct: 16 LALG-GCAAMAEREVTGERAEAAEVNAELGI-----GYLREGEVDQAERNLKRALEFDPG 69 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A + R G L+ A+ + +AL P+V ++ + + A Sbjct: 70 HPLANLGMANVYERRGALDRAEEHYRRALRRDDGNPYVQTSLGALLCRREAFDEAQELFA 129 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + +++ R I L+ + AD G + E+L++ A + A Sbjct: 130 RA-IDNPDYD-QREIALMNSGVCFADAGQTERAEEKLREALRINPQYPRALLEMASLTYE 187 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 ++ + L RLE + ES E+L + Sbjct: 188 DDRPMQTRAFL-------------------------------QRLEGLGVESSETLFLCY 216 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 + L +G+ A+ A + P + L +E+ Sbjct: 217 RAELALGNRRAANDCAERLRRQYPDSMELVRLEDMERNGG 256 >gi|298485755|ref|ZP_07003834.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159781|gb|EFI00823.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 637 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 93/310 (30%), Gaps = 48/310 (15%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAA----HNIPLARKMHSYVSQ---QHTFHNEYLVY--- 123 K GY L + A + ARK + + E L Sbjct: 88 QRFPKARPKPGYLEGNQALRAYANRDYDGSANHARKAIAQAPKNLDYRMMLIEALQRQQR 147 Query: 124 LLEVQIALAERQY--NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L E Q+A + Q + A + + GD ++A A +A+ Sbjct: 148 LDEAQLAAIQEQAAVDKAASGYK-------------------ALARGDNDTAVSEAREAV 188 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P + +V + +++ A + + N N A LL+ R GD Sbjct: 189 RSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMRQRLGD 244 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANI 298 + D ++ L ++ A + + KA L+K P E+ Sbjct: 245 QDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSKALQRLQKARDAGELQPGDEVQIA 301 Query: 299 YTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLA 351 Y + + + + KR R + ++ S + A + + Sbjct: 302 YFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPDDAQAIAYFKRVLDYQKAG 361 Query: 352 MKIAPRKEIF 361 P +++F Sbjct: 362 DLQMPAQQVF 371 >gi|194363883|ref|YP_002026493.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3] gi|194346687|gb|ACF49810.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3] Length = 689 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 57/203 (28%), Gaps = 7/203 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A + A P + A+ L + + A + Sbjct: 6 IQALRQNQADQAVQLAQAWTRDEPGLAEAHRWLALALQQQGNAEHAMDALQEALRLAPD- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + ++ + + L NS A + A I +N +A Sbjct: 65 ---DAQLHLQQAGLLLALRQFEGADEALARTTGLDPNSFSAYLMQAHLAIGRNDFDEAAR 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + +V P HPE+ I L + L + + L + L Sbjct: 122 VSTLASRVEPDHPELLTIDGMVALRRGDADRALSLLSAASKALPDDPRVLYALGFAYLGK 181 Query: 339 GSIDQAHAKAMLAMKIAPRKEIF 361 + A +++ P Sbjct: 182 DMLAFAEQSFRRVLELNPSLSSL 204 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 86/269 (31%), Gaps = 41/269 (15%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQ------------------------------QHTFHNE 119 G++++ + A + S S+ + N Sbjct: 140 DGMVALRRGDADRALSLLSAASKALPDDPRVLYALGFAYLGKDMLAFAEQSFRRVLELNP 199 Query: 120 YLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRY 176 L L L VQ+AL + A E +++ LQ P A+ L E S R G A Y Sbjct: 200 SLSSLHGLVVQLALRQGNVPAAAEAMQVALQQPQMDVPAMRRLAGELSLRSGQPLQALEY 259 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 L+ PD + + ++ + A L+ +N + + + L ++E Sbjct: 260 LLPLLETQPDDRQMLQLLLMSWQRLGREDEARARLDAVLENNDQLHD---VWLARLAIEQ 316 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + + ++ + A + + +AE I E+I P Sbjct: 317 VGSESAVTAVERWMAAM---PEHLPALEARLRLHDMAGEHAQAEAIAERIVSQEPGRVSG 373 Query: 297 NIYT--HLLSENTVGKLKRALRLEEINKE 323 LL + + R L ++ E Sbjct: 374 ETRLVEGLLQRDPAAAVARVQALIDLAPE 402 Score = 44.2 bits (103), Expect = 0.055, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL + Q + A + + + A L + G+ A +AL ++PD Sbjct: 8 ALRQNQADQAVQLAQAWTRDEPGLAEAHRWLALALQQQGNAEHAMDALQEALRLAPDDAQ 67 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++ A L + + N A L+ ++ + D + + Sbjct: 68 LHLQQAGLLLALRQFEGADEAL--ARTTGLDPNSFSAYLM--QAHLAIGRNDFDEAARVS 123 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSEN 306 + ++ + + + +A +L K +P A + +L + Sbjct: 124 TLASRVEPDHPELLTIDGMVALRRGDADRALSLLSAASKALPDDPRVLYALGFAYLGKDM 183 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + R+ E+N +V ++AL G++ A +A++ Sbjct: 184 LAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVPAAAEAMQVALQQ 231 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 96/293 (32%), Gaps = 14/293 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 N A M + ++ ++L + + LA RQ+ A E L + A Sbjct: 46 GNAEHA--MDALQEALRLAPDDAQLHLQQAGLLLALRQFEGADEALARTTGLDPNSFSAY 103 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + D + A R +T A + PD P + + + RA++ L+ K Sbjct: 104 LMQAHLAIGRNDFDEAARVSTLASRVEPDHPELLTIDGMVALRRGDADRALSLLSAASKA 163 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R +L A K + + L+L + + + Q Sbjct: 164 LPDDPR----VLYALGFAYLGKDMLAFAEQSFRRVLELNPSLSSLHGLVVQLALRQGNVP 219 Query: 278 KAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A ++ P ++ L S + L+ L L E + + L ++ Sbjct: 220 AAAEAMQVA-LQQPQMDVPAMRRLAGELSLRSGQPLQALEYLLPLLETQPDDRQMLQLLL 278 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQ-ANSHNTDKILYWTQ 383 +G D+A A+ ++ + ++L IEQ + + W Sbjct: 279 MSWQRLGREDEARARLDAVLENNDQLHDVWLARLAIEQVGSESAVTAVERWMA 331 >gi|320666656|gb|EFX33639.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. LSU-61] Length = 1157 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 21/168 (12%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A + L +++K + A A+ L D G + + ++++ A Sbjct: 252 AAAQSQLTEQQKQLADP----AFRARAQGLAAVDSGMAGKAIPELQQAVRANPKDSEALG 307 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK-- 312 ++ + + A LEK ++PH + + + + + K Sbjct: 308 ALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNP 367 Query: 313 -RALRL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RA RL + N ++ +S + + +A+ A +++ Sbjct: 368 DRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|229078801|ref|ZP_04211354.1| hypothetical protein bcere0023_14640 [Bacillus cereus Rock4-2] gi|228704483|gb|EEL56916.1| hypothetical protein bcere0023_14640 [Bacillus cereus Rock4-2] Length = 434 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|28199334|ref|NP_779648.1| hypothetical protein PD1453 [Xylella fastidiosa Temecula1] gi|182682059|ref|YP_001830219.1| tetratricopeptide repeat protein [Xylella fastidiosa M23] gi|28057440|gb|AAO29297.1| heat shock protein [Xylella fastidiosa Temecula1] gi|182632169|gb|ACB92945.1| conserved hypothetical protein [Xylella fastidiosa M23] Length = 392 Score = 51.5 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 49/389 (12%), Positives = 112/389 (28%), Gaps = 44/389 (11%) Query: 60 AVSRFFLSCPAMLFHMLHKRN--YDKGYKALYT-------GLMSIAAHNIPLARKMH--- 107 F A L + R G+ + GL + + A ++ Sbjct: 7 WFWFFLFLPLAALSGWVIGRRGGQRHGHAQVSRLSSTYFRGLNYLLSEQPDKAIELFQHI 66 Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFE 163 + + ++ L +L + + + A + + + P + FA+ +L + Sbjct: 67 AELDKETFETQVALGHLFRRR-----GEIDRAIRLHQGLFKRPDLTDHQKVFALLALGED 121 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWN 222 + G L+ A+ T+ I AP ++ Y ++W +AI + + + Sbjct: 122 YMKSGLLDRAETVFTELAQIDQRAPQALRHLISIYQAERDWEKAIDNAIRYEVVTGEPMG 181 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + A + + + + S+ + I + A Sbjct: 182 KLIAQFECELADRYRASNQHDRALEAVSRAYQADATSVRSGIIEGRIEADLGHHEAAVRA 241 Query: 283 LEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSK 333 E+ + +P P + Y + + A E + + +++ Sbjct: 242 WERAARHDPEYLPEIIPSLLIAYRQVGD------IAGARNFLSEMTEHYRGIAPVLAMTQ 295 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM--PD 391 + QA +K P L + A+ + LY + + + Sbjct: 296 LIESQEGPAQARVYLGSQLKAKPSVRGQSALIDLTLADGSDPVASLYDLKHITDQLLVRN 355 Query: 392 PLWISDD---GYLSSVWLPLSPISKTLCY 417 P + G + W P K Sbjct: 356 PSYRCTRCGFGAKTHHWQ--CPSCKEWGT 382 >gi|324007316|gb|EGB76535.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 9.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|124486270|ref|YP_001030886.1| hypothetical protein Mlab_1454 [Methanocorpusculum labreanum Z] gi|124363811|gb|ABN07619.1| Tetratricopeptide TPR_2 repeat protein [Methanocorpusculum labreanum Z] Length = 240 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 79/238 (33%), Gaps = 13/238 (5%) Query: 131 LAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + ++ P + Y+L + G+ A A + P Sbjct: 1 MISGDEKGAIFCYQESVKLRPGIPDV-WYNLARLFEKTGERKEALATHITAGKLFPADYR 59 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + +++ A+ + +A LL ++ G+ + A Sbjct: 60 FSAERARLLAESGKYTEAVNAASDALASAPYSP----TLLANKAGYLIFAGNPDEARQTA 115 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLS 304 ++L + +A + A + KA+ +E P+ + S Sbjct: 116 EQALAIDPGCALAYLHKAHAESLLGNAAKAKETMETGLSSV--PDDGRLLKLQANLLIRS 173 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 E+ L ++ ++ ES + + +G + A + AMK+ P+++ + Sbjct: 174 EDFEAGLASIEKVLLLDPNDAESWSLKGAASAYLGRKEDAISAFEQAMKLDPKEKAYR 231 >gi|217959096|ref|YP_002337644.1| TPR domain protein [Bacillus cereus AH187] gi|217068024|gb|ACJ82274.1| TPR domain protein [Bacillus cereus AH187] Length = 420 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 89/281 (31%), Gaps = 59/281 (20%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + +E ++ ++ ++ + A E +L V + R Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHK-----VMGGVVIALR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTE---------AVV----QQYVLAKEWSRAITFLNQ 213 +G+ SA +A+ + + + W Sbjct: 176 LGETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAW--------- 226 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + KE + A L + + +G + SY + +K+ + S+ + A Sbjct: 227 --QELKELDPEYASLYMYLAKSYEKEGMLQESYETLHKGIKVDELSVPFYVELANIAAKL 284 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K +AE +L+K +++P H + Y ++L E E E L+ Sbjct: 285 GKIAEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIA 326 Query: 331 VSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 V + A++ G D A AK L M + + Sbjct: 327 VVERAIDSGEPDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|94967944|ref|YP_589992.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549994|gb|ABF39918.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 324 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 12/199 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y+ A M + + R A+ YA KA+ + P P Sbjct: 131 KNYDQARGAFAQMFDVKRDSAASYLFTARMLLRQEYDPVAEEYAQKAIALEPTLPLAHYL 190 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIES 252 + + ++ AI ++ + L A S + D + + +++ Sbjct: 191 LGELHLYKSRVPEAIEDFRKELNLNPSYAPAYYKLADAYSRVQKYDDAERLLQRSIWLDA 250 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307 I K L + + A L+ ++P H + Y L + Sbjct: 251 TTTGP-----YILLGKVLEKKGEPLLALRALQHAASMDPKNPITHHLLGQSYRDLGKSDD 305 Query: 308 VGK-LKRALRLEEINKESV 325 + LK A L+ E+ Sbjct: 306 AERELKLAEELQNKQNENR 324 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 37/293 (12%), Positives = 91/293 (31%), Gaps = 68/293 (23%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 QY+ A +L+ + Q + E V + + GD SA RY +A + + Sbjct: 28 GQYDEAIVQLQKLQQEQSAIEGLVREIGIAYYKKGDYLSAIRYLKQATKQNEKDSEAVQL 87 Query: 194 VVQQYVLAKEWSRAITFLNQ--------------------------KKKNAK-----EWN 222 + Y L+ + AI L + + + Sbjct: 88 LGLSYYLSGKPQDAIPLLEKVQTWFPSANVDASYILGICYIHLKNYDQARGAFAQMFDVK 147 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R+ A + + + + A +++ L +A + + +++ +A Sbjct: 148 RDSAASYLFTARMLLRQEYDPVAEEYAQKAIALEPTLPLAHYLLGELHLYKSRVPEAIED 207 Query: 283 LEKIWKVNP--HPE---IANIYTHLLSENTVGK--------------------------- 310 K +NP P +A+ Y+ + + + Sbjct: 208 FRKELNLNPSYAPAYYKLADAYSRVQKYDDAERLLQRSIWLDATTTGPYILLGKVLEKKG 267 Query: 311 -----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L+ ++ ++ + ++ + ++G D A + LA ++ ++ Sbjct: 268 EPLLALRALQHAASMDPKNPITHHLLGQSYRDLGKSDDAERELKLAEELQNKQ 320 >gi|331670362|ref|ZP_08371201.1| cellulose synthase operon protein C [Escherichia coli TA271] gi|331062424|gb|EGI34344.1| cellulose synthase operon protein C [Escherichia coli TA271] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDHDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|114570361|ref|YP_757041.1| hypothetical protein Mmar10_1811 [Maricaulis maris MCS10] gi|114340823|gb|ABI66103.1| Tetratricopeptide TPR_2 repeat protein [Maricaulis maris MCS10] Length = 596 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 11/264 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ +L + A +L R G L++A Sbjct: 32 PDQPDALMLRAMARSRTGDDSGAVSDFLAAGLCHPQPHAVHNNLGNHHQRAGRLDAAVAA 91 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +AL ++P + +++ A T +N A N A+LL A Sbjct: 92 YREALRLAPGFADARMNLAITLSQGEDFEAARTAINAVLDQAP----NHALLLNALGNVE 147 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291 G+ A+ ++ ++ I + + L + P Sbjct: 148 RRAGNPDAARRAYDGAIAADPQAVQPRINRGALRRETGEIEASCADLRDACGMAPGLAEA 207 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 H ++A+ L + R L + + ++ + E G D+A Sbjct: 208 HAQLAHSLRTSLDITGAEQAYR-QALA-LAPDDPGYHADLAGLLAEAGQGDKALTTLQGR 265 Query: 352 MKIAPRKEIFLLLAQIEQANSHNT 375 + ++ ++ +LA+++ + Sbjct: 266 IAVSGDPRLYEVLARLQMRSGRPE 289 >gi|320191422|gb|EFW66072.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC1212] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|258591282|emb|CBE67579.1| putative TPR domain protein [NC10 bacterium 'Dutch sediment'] Length = 585 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 75/238 (31%), Gaps = 9/238 (3%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A ++ A + LQ+ L + GD+ A AL + Sbjct: 65 AEQAGDHHAAITWQKAALQVDHRSVVMHNHLASLHMKRGDVRGAINAGEDALALDSKNLH 124 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++ + +NA + + R + + + + Sbjct: 125 AHLLLAAVYQSLHN----LSVAERYFRNALDLDPVRTETYVQLAALYREARKAQEAIAVY 180 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 ++L + S++ + + + + +A I +I + + + A + E G Sbjct: 181 RQALDVDPGSLVIRYNLGRLYLEEGQSEQASHIFREILERDSAFDPALTALGMSLE-AQG 239 Query: 310 KLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 KL A + + + E ++++ L +D A + + P F L Sbjct: 240 KLDEARTMYQRALVDDPRNGEIRERLAQLLLRQKELDAALIEYRRLLDQEPNNSSFKL 297 >gi|285019856|ref|YP_003377567.1| hypothetical protein XALc_3096 [Xanthomonas albilineans GPE PC73] gi|283475074|emb|CBA17573.1| hypothetical protein XALc_3096 [Xanthomonas albilineans] Length = 695 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 83/292 (28%), Gaps = 15/292 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + S + ++LL I + A L + A Sbjct: 46 GDTAGALDSIDRAIALAPEDAELHLLRASILVGANDLPQAEVALAQTAALDPNAFMAYIM 105 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + GDL+ +R + A + P+ P + + + RA+ L++ Sbjct: 106 RGHLALGRGDLDEVERLSRTAARLQPEHPQLLGLDGMLALRRGDADRALALLSRASNALP 165 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMASICAAKSLISQNKKRK 278 + R LL A DK + + L S+ A+ Q + Sbjct: 166 DDPR----LLYALGFAYLDKQHLAFAETAFRRVATLTPGTSVPMMALVAQLAHRQGRLDD 221 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN------KESVESLVIVS 332 A LE + +P + AN+ L E + + A LE + +L Sbjct: 222 AIAALETV-LADPAGDTANM-RRLAGEYALQADRPAQALEHLRPALAAVPADRRTLHAAL 279 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 +G++D A A A+ L + Sbjct: 280 IAWQRLGTLDDARATLEAALTSTTDAHDLWL--ARLALEPVGGAEARALIAR 329 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 34/263 (12%), Positives = 69/263 (26%), Gaps = 41/263 (15%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI 183 L Q+A + + + A LE +L PA + L E + + A + AL Sbjct: 208 LVAQLAHRQGRLDDAIAALETVLADPAGDTANMRRLAGEYALQADRPAQALEHLRPALAA 267 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P A + + A L + + + + + + Sbjct: 268 VPADRRTLHAALIAWQRLGTLDDARATLEAALTSTTDAHD------LWLARLALEPVGGA 321 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + + A + ++ + E + Sbjct: 322 EARALIARWQAAMPAHVPALEAQLRVHDMAGERDQGEAV--------------------- 360 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 A R+ + + + + LE G A M+ P + +L Sbjct: 361 ----------AQRIVALEPGRISGEERLVEAMLERGEHAAAIDHVCRLMQRLPEQNRTIL 410 Query: 364 ---LAQIEQANSHNTDKILYWTQ 383 LA ++ A D + W Sbjct: 411 RPWLAAVQDAAGRVEDALATWLA 433 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 90/296 (30%), Gaps = 24/296 (8%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEM 145 G +++ ++ ++ + + L+ L+ +AL + A Sbjct: 106 RGHLALGRGDLDEVERLSRTA-ARLQPEHPQLLG-LDGMLALRRGDADRALALLSRASNA 163 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-LAKEW 204 + P +Y+L F L A+ + ++P A+V Q Sbjct: 164 LPDDPR----LLYALGFAYLDKQHLAFAETAFRRVATLTPGTSVPMMALVAQLAHRQGRL 219 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 AI L + N L +L+ + A+ ++ ++ A++ Sbjct: 220 DDAIAALETVLADPAGDTANMRRLAGEYALQADRPAQALEHLRPALAAVPADRRTLHAAL 279 Query: 265 CAAKSLISQNKKRKAEVILEKIWKV--NPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 A + L + + R LE + H ++ L R + Sbjct: 280 IAWQRLGTLDDAR---ATLEAALTSTTDAH-DLWLARLALEPVGGAEARALIARWQAAMP 335 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSH 373 V +L ++ G DQ A A + + P + + + +E+ Sbjct: 336 AHVPALEAQLRVHDMAGERDQGEAVAQRIVALEPGRISGEERLVEAM--LERGEHA 389 >gi|254795483|ref|YP_003080320.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. TW14359] gi|254594883|gb|ACT74244.1| cellulose synthase subunit [Escherichia coli O157:H7 str. TW14359] Length = 1002 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 197 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 254 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 255 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 314 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 315 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 374 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 375 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 431 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 432 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 485 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 486 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 537 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 429 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 488 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 489 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 548 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 549 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 583 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 102 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 156 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 157 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 216 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 217 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 260 >gi|222056118|ref|YP_002538480.1| hypothetical protein [Geobacter sp. FRC-32] gi|221565407|gb|ACM21379.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 573 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 22/201 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVL-----------AKEWSRAITFLNQKKKNAKEW 221 A +A + P A + +++ + A++ L + A E Sbjct: 20 AANHAQTPPSLQPQAVQPSINIIESRARYIFSLSRLHLLEGDLDGALSLL----QAAAEA 75 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A + A + + +++KL A I A L++ + + A Sbjct: 76 DPQAAYIHKAEAQIYLQMNRYQDALQACEKAIKLDPEFAEAQILAGNILVALQRDKDAIP 135 Query: 282 ILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +K ++ P E +A Y + L +++ +S + K Sbjct: 136 YYKKAIELEPAKEDIYLHLAIAYLKTFEYEGA--VNTLKALIKVSPDSALGYYYLGKTYD 193 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 +M ++A A+++ P Sbjct: 194 QMKLSNEAIKYYKKAVELKPD 214 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 82/264 (31%), Gaps = 23/264 (8%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A K + + ++ + L + A + +L+I V L Sbjct: 201 AIKYYKKAVELKPDFDQAFIDL--AITQEMQGLTKDAINAYKELLKINPVNYTVVQHLVQ 258 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEW 221 + D+ SA + + + + + AIT + +++ + + Sbjct: 259 LYIQNKDMESALILLQDMARNNVGGQESHRKLGLILLEMERYEDAITEFCDILRQDPEAY 318 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKR 277 + +E+ + AIE K S A A ++ Sbjct: 319 QVRYYLASTYEEMEDFE---------TAIEEFKKIPTSSTYYYDAVGHLAYLYKEMGQEA 369 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGK-LKRALRLEEIN---KESVESLVIVS 332 K +L++ P +Y +L ++ + + L EI+ + Sbjct: 370 KGIQLLKESIAEQPTKI--ELYLNLAGLYESMDRFVDGLQVLSEIDDRFPSDPRLNFRMG 427 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + ++G+ D + A+ +++ P Sbjct: 428 VLYDKIGNKDASIARMKKVLQLTP 451 >gi|108762465|ref|YP_631126.1| putative adventurous gliding motility protein [Myxococcus xanthus DK 1622] gi|108466345|gb|ABF91530.1| putative adventurous gliding motility protein [Myxococcus xanthus DK 1622] Length = 946 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 97/302 (32%), Gaps = 18/302 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI------PA 151 ARK++ + L+ L ++ AE A L +++ P Sbjct: 570 GEPAEARKLYEARVKAEPGELRALLPLAMLR-YQAEGNAAGAVRDLRALMKNRARYDEPE 628 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 E + L G ++A + A +AL + P + + ++ +A T L Sbjct: 629 VAEV-LVHLAAAERTAGSQDAAVKSAEEALQLVKGLPEAHLQLFLVALGRRDAEKARTHL 687 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + ++ + + + + + E++KL + A + A + Sbjct: 688 PGFRGQLEDGALEKVL----EGRLLLLEKKPLEALEGFQEAVKLDARRLDAQLLAGVAAA 743 Query: 272 SQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 S ++ A L + + +P P A L TV ++ A+ E L Sbjct: 744 SAKRRDDAFRALHQALQSDPLRLEPRPATSAYWLRPRETVEGVEGAILALSEGPEDPSPL 803 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSHNTDKILYWTQSA 385 + + D A +++ + L +++ + ++ + +A Sbjct: 804 LYEGLLRFHQHQFDAAERHLRSVLEVDANNAGALAYRSLIALQRGALADARRLGERSAAA 863 Query: 386 LH 387 Sbjct: 864 GR 865 >gi|302811837|ref|XP_002987607.1| hypothetical protein SELMODRAFT_126394 [Selaginella moellendorffii] gi|300144761|gb|EFJ11443.1| hypothetical protein SELMODRAFT_126394 [Selaginella moellendorffii] Length = 938 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 87/303 (28%), Gaps = 46/303 (15%) Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 AL E+ + + E ++ +L+ P + E GD++ A+ T A Sbjct: 565 AALLEKGH-GSREAVDSLLERAVGCCPKAEVLWLLG-AKEKWLAGDIDGARAILTAAYVA 622 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P++ + A + ++E RA L + ++ R + + ++ + G + Sbjct: 623 IPESEEIWLAAFKLEFESREPERARILLAKARERGGCSER----VWMKSAMVERELGKVA 678 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK----VNPHPE-IANI 298 E LK + + A + E+ + P +A Sbjct: 679 EERRLLEEGLKRFPGFHKLWLMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAA 738 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 KE E + + G +A A A++ R Sbjct: 739 ELEEKGGGIAKARALLTTARLKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQECRRS 798 Query: 359 EIFLL----LA-----------QIEQANSHN---------------TDKILYWTQSALHA 388 I +A ++ + DK W + A+ A Sbjct: 799 GILWAASAEMAPRAQRKARSFDAVKNSEQDPFVVAVVGKFFWQDRKVDKARSWIKRAVAA 858 Query: 389 MPD 391 PD Sbjct: 859 APD 861 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 76/218 (34%), Gaps = 17/218 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L+ Q+ A E L+ PAT + + G + A+ T A Sbjct: 699 LMLGQLEERTGNLAAARSVYERALERCDPATSTPVWLAAAELEEKGGGIAKARALLTTAR 758 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P + A ++ A +W A + + + R+ +L A S E A + Sbjct: 759 LKKKEDPELWLAAIRAEARAGKWKEAEALMAKALQEC-----RRSGILWAASAEMAPRAQ 813 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A DA+++ + ++A + K K KA +++ V P+I + + Sbjct: 814 RKARSFDAVKNSEQDP-FVVAVV--GKFFWQDRKVDKARSWIKRA--VAAAPDIGDFWAV 868 Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 L + + R + + E + VSK Sbjct: 869 LYRFEQEHGSAEAIEEVVERCKAAEPKHGERWIRVSKA 906 >gi|194099544|ref|YP_002002674.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae NCCP11945] gi|291042981|ref|ZP_06568719.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293398324|ref|ZP_06642515.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae F62] gi|193934834|gb|ACF30658.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] gi|291013120|gb|EFE05089.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291611248|gb|EFF40332.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae F62] gi|317165041|gb|ADV08582.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 402 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 70 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 181 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + A+ A+E+ K C Sbjct: 182 QLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIEH 241 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 292 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395 >gi|126461199|ref|YP_001042313.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126102863|gb|ABN75541.1| TPR repeat-containing protein [Rhodobacter sphaeroides ATCC 17029] Length = 566 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 7/238 (2%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L + + + + H + LL QI + Q+ +A E + Sbjct: 262 LAGALSGEVDDGSTLLYARTATHLRPDHTEALLLSAQILDNQGQHQLASETYARIPTADP 321 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A G + ++ P+ V A+ + ++ A+ Sbjct: 322 MFFVAEIGRADALRADGKIEASLEVLQGLARSKPELMQVHLALGDALRREERYADAVKAY 381 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + R L +R + + + D +L+L + S + Sbjct: 382 DAAIARVPAPERQHWPLFYSRGICHERLSHWKEAEADFRRALELNPDEPQVLNYLGYSFV 441 Query: 272 SQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTVGKLKRALRLEEINK 322 + +A ++E+ P +A Y L ++ V +++A LE ++ Sbjct: 442 DRGQNLEEALSMIERAVAARPESGYIIDSLAWAYFRLGRYQDAVEPMEKASLLEPVDP 499 >gi|332345495|gb|AEE58829.1| cellulose synthase operon protein C [Escherichia coli UMNK88] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|301626228|ref|XP_002942298.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Xenopus (Silurana) tropicalis] Length = 1127 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 85/273 (31%), Gaps = 28/273 (10%) Query: 132 AERQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A E M+ +R A+++L G + A+ ++L Sbjct: 809 LTANTTEAEEYYRRALMISPQHSR--ALFNLGNLLRNKGQDDEAELLLRESLHYGSYFGD 866 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ K + A K+ E + L + D + Sbjct: 867 AYSSLGSLLADQKRYEEADDVYQTGIKSCPE----NSDLHNNYGVFLVDMEKSQKAESHY 922 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLS 304 + +L L + +A + + S + ++AE K +++ ++ A +Y Sbjct: 923 LHALHLRPDHHVAMLNLGRLYRSLGQNKEAEKWYRKALQISREADVISPLGALLYNTGQH 982 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LL 363 E +L ++ +++ + ++++ +G I +A A A P L Sbjct: 983 EEAR-RL--YQEAVGLHPRNIQIRLSLAQVLAVLGQIHEAEALAYGIAAEVPDCTECFRL 1039 Query: 364 LAQI-----------EQANSHNTDKILYWTQSA 385 L+ I E+ N + W Sbjct: 1040 LSAIYSKREDYVKSYERVAELNPTQAQAWMNMG 1072 Score = 44.2 bits (103), Expect = 0.044, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 74/206 (35%), Gaps = 12/206 (5%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A+ + AL + PD + + Y + A + + + ++E + + + Sbjct: 916 QKAESHYLHALHLRPDHHVAMLNLGRLYRSLGQNKEAEKWYRKALQISREADVISPLGAL 975 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + G + E++ L +I + A+ L + +AE + + + Sbjct: 976 LY-----NTGQHEEARRLYQEAVGLHPRNIQIRLSLAQVLAVLGQIHEAEAL---AYGIA 1027 Query: 291 PH-PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ + L + +K R+ E+N ++ + + I G A A Sbjct: 1028 AEVPDCTECFRLLSAIYSKREDYVKSYERVAELNPTQAQAWMNMGGIRHMQGDYTSARAF 1087 Query: 348 AMLAMKIAPRKEIFLL-LAQIEQANS 372 A + P ++ LA++++ + Sbjct: 1088 YQKAAVLDPDSKLLKENLAKLQRIEN 1113 >gi|238897359|ref|YP_002923036.1| putative N-acetylglucosaminyl transferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465114|gb|ACQ66888.1| putative N-acetylglucosaminyl transferase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 392 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 46/217 (21%) Query: 79 RNYDKGYKA-LYTGLMSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQ 135 + ++A L G + + A ++H + S TF L + +A Sbjct: 63 KKEGSAFEAHLTLGNLFRSRGETDRAIRIHQSLMESASLTFDQRLLAIQQLGRDYMAAGL 122 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 Y+ A +++ R ++ + ++ Sbjct: 123 YDRAERMFNELIEEKNFRVSSL----------------------------------QQLL 148 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIA-----RSLENADKGDMIASYHDA 249 Y EW AI + K+ KE + + +++ D + I+ +A Sbjct: 149 AIYQAMSEWVNAIKVAQKLIKSGKEHQHLQKKVAHFYCELALKAIAIDDISNAISLLKNA 208 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 I K C ASI + I N K +L+K+ Sbjct: 209 ISVNKHCAR---ASIMLGRLYIDSNDFSKTVAVLQKV 242 >gi|119493564|ref|ZP_01624229.1| hypothetical protein L8106_25972 [Lyngbya sp. PCC 8106] gi|119452618|gb|EAW33800.1| hypothetical protein L8106_25972 [Lyngbya sp. PCC 8106] Length = 311 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 59/176 (33%), Gaps = 16/176 (9%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+S+ ++ + +SQ + NEY + L Q A + +L Sbjct: 88 LISMGQGDVKDVVEPLQKLSQMNPETNEYSILL--AQSQQYTGDLEGAAQTYRQILTQQP 145 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLA 201 + A+ L +A + +P A + Y Sbjct: 146 GQIQALQGLVNLLLTQKRPEAAIGLLQDTIKAAPQANQAQPGTIDETSVQLILGQVYAEQ 205 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 K + AI ++ +N +E R ++A+++ D+G++ + ++ L Sbjct: 206 KRYDEAIAIYDEAIRNNQEDFRP----VLAKAIVLKDQGNLEEAEPLFGKASDLAP 257 >gi|194435786|ref|ZP_03067889.1| cellulose synthase operon protein C [Escherichia coli 101-1] gi|253771639|ref|YP_003034470.1| cellulose synthase subunit BcsC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163452|ref|YP_003046560.1| cellulose synthase subunit BcsC [Escherichia coli B str. REL606] gi|300927975|ref|ZP_07143532.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|194425329|gb|EDX41313.1| cellulose synthase operon protein C [Escherichia coli 101-1] gi|242379048|emb|CAQ33848.1| oxidase involved in cellulose synthesis [Escherichia coli BL21(DE3)] gi|253322683|gb|ACT27285.1| cellulose synthase operon C domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975353|gb|ACT41024.1| cellulose synthase subunit [Escherichia coli B str. REL606] gi|253979509|gb|ACT45179.1| cellulose synthase subunit [Escherichia coli BL21(DE3)] gi|300463982|gb|EFK27475.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|323959461|gb|EGB55118.1| cellulose synthase operon protein C [Escherichia coli H489] gi|323971388|gb|EGB66627.1| cellulose synthase operon protein C [Escherichia coli TA007] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|323525184|ref|YP_004227337.1| HemY domain-containing protein [Burkholderia sp. CCGE1001] gi|323382186|gb|ADX54277.1| HemY domain protein [Burkholderia sp. CCGE1001] Length = 396 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 46/385 (11%), Positives = 112/385 (29%), Gaps = 62/385 (16%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 V + + S + + L L + R P + + K + Sbjct: 28 GQVLLVYPPYRVDMSLNLFVVGLVVLFILLYALLRIVRSIWHMPQRVAAYRARARVAKAH 87 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQ--------------------QHTFHNEYLVYLL 125 AL + ++ A A K ++ +E+L Sbjct: 88 AALRDAIGNLYAGRFSRAEKAAKDALANGDNKGAAGLIAATAAHRMHEYARRDEWL---- 143 Query: 126 EVQIALAER-QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A + + A ++ R D + A + Sbjct: 144 ----AQIDGADWQDAR-----LMATADMRADGR-----------DADGALAALKEMQSQG 183 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + ++ K W+ + + +K + R + A + + Sbjct: 184 GRRIHAQQITLRAQQQLKNWAEVLKLVKTLEKREAIHP-----AVAVRLRQLAAENLLRD 238 Query: 245 SYHDAIESLKLCDNSIMASICAAK-------SLISQNKKRKAEVILEKIWKVNPHPEIAN 297 H+A L+L ++ + + L++ N+ ++A I+E N + Sbjct: 239 RRHNADALLELWNSLTPTERHSPRLADLAAELLLALNRPQEARKIVEDALAQNWDARLLR 298 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + + +++A ++ E + L + ++ L +A + A+K+A Sbjct: 299 RYPDTAGGDALPLIQKAEAWQKDRPEDADLLFALGRLCLHQQLWGKAQSFLERALKLADN 358 Query: 358 K----EIFLLLAQIEQANSHNTDKI 378 + LA++ + + +K Sbjct: 359 ETLKIRSHRALARLHE-QLGDAEKA 382 >gi|212527838|ref|XP_002144076.1| DnaJ and TPR domain protein [Penicillium marneffei ATCC 18224] gi|210073474|gb|EEA27561.1| DnaJ and TPR domain protein [Penicillium marneffei ATCC 18224] Length = 707 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 33/208 (15%) Query: 92 LMSIAA----HNIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEMM 146 LM+ A N K + + LL + + A + M Sbjct: 362 LMAGEAQLKIGNDNGYGKAQDVAIALLRENSQDPDALLLRARAYYGQGDNEQAVKYTRMS 421 Query: 147 LQ-IPATR--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 LQ P + + L + R D +A A AK+ Sbjct: 422 LQLDPDNKKAFTLLR-LVQKLVRTKDEGNA------AFK------------------AKD 456 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + RA+ Q + + LL R+ D + D E+L+L + I A Sbjct: 457 YKRAVELYTQGLEIDPTNKDTNSKLLQNRAQAQLALKDYEKAVEDCTEALRLDPSYIKAQ 516 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291 AK+ + ++A + + ++NP Sbjct: 517 KIRAKAHGAAGNWQEAIKDYKNVAEINP 544 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 82/237 (34%), Gaps = 29/237 (12%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + Y A ++ L++ + + A A +AL++ P+ + Sbjct: 223 QGDYERAIQEYNKALEVNPNSSIFLSNRAAAFLSANRFIEALDDAQRALELDPENSKIMH 282 Query: 193 AVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + A+ L++ + N + I ++ ++ + G + A Sbjct: 283 RLARILTSLGRPAEALDVLSKVQPPASAKDRANAETMLRHITQAEDSLNHGKGGSLVVFA 342 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 IE + RK W++ + ++N G Sbjct: 343 IEQARQM--LGPGV----------KTPRK--------WQLMA----GEAQLKIGNDNGYG 378 Query: 310 KLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364 K + A+ L N + ++L++ ++ G +QA +++++ P K+ F LL Sbjct: 379 KAQDVAIALLRENSQDPDALLLRARAYYGQGDNEQAVKYTRMSLQLDPDNKKAFTLL 435 >gi|156933752|ref|YP_001437668.1| tetratricopeptide repeat protein [Cronobacter sakazakii ATCC BAA-894] gi|156532006|gb|ABU76832.1| hypothetical protein ESA_01578 [Cronobacter sakazakii ATCC BAA-894] Length = 389 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 53/280 (18%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A ++ T Sbjct: 83 GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEGMFNQLV--DETDF- 139 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 R+G + ++Q Y +W +AI + Sbjct: 140 ----------RVG---------------------ALQQLLQIYQATSDWQKAIDAAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE R A +L+ DM + + NS SI + +++ Sbjct: 169 KLGKEHQRVEIAHFYCELALQAMSNEDMDRAMSLLKKGAAADRNSARVSIMMGRIFMARG 228 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKESV 325 A +LEK+ ++ E+ + + + L+R E N Sbjct: 229 DYAHAVEMLEKV--ISQDRELVSETLEMLQVCYQQLGKPDEWAEFLRRC---VEENTG-A 282 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 E+ ++++++ + D A ++ P +F L+ Sbjct: 283 EAELMLAQVLEQREGADSAQIYITRQLQRHPTMRVFHRLM 322 >gi|324116599|gb|EGC10516.1| cellulose synthase operon protein C [Escherichia coli E1167] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDHDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|109896748|ref|YP_660003.1| TPR repeat-containing protein [Pseudoalteromonas atlantica T6c] gi|109699029|gb|ABG38949.1| TPR repeat [Pseudoalteromonas atlantica T6c] Length = 917 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 11/216 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A E +E I T E L S D +AL+ SP+ Sbjct: 379 QGNVKDAQELVEKSSSISTTAEDLTRLGLLKLSLNNLDGIVNL---EEALEKSPELESAK 435 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + Y+ K++ +A+ ++ A++ N A LL D+ + + + Sbjct: 436 KTLATAYITTKQYDKALEL--AQQWKAEDANDISAYLLAGEVFSKQQ--DLSNAKAEFEQ 491 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYT-HLLSENTV 308 +++ A++ I++ +A+ L + P P +A Y + T Sbjct: 492 VMRIDPEHKGAALGLVNIAITEKDVVRAQSGLTALLNRFPDYTPALATAYLFNKQQGKTQ 551 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 ++ ++ E ++ +++ L DQA Sbjct: 552 QGIEVIESALNKAPDNQELSMLYARVLLLEKQYDQA 587 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 30/211 (14%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA--- 218 E D SA A+ ++P +P + + Y+ K++ A L++ + Sbjct: 33 QEFIAQNDSASAIISLKTAVQLAPKSPEARFELGKVYLDEKQFESAEKELSRALEYGYDG 92 Query: 219 ----KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 R ++ + ++ S D E SL+ N Sbjct: 93 AKVLPLLTRAYQRTGAYAAISEMEDNNVDLSNEDKAE----------IGYFKIVSLVRLN 142 Query: 275 KKRKAEVIL--------EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 K A I+ + ++K ++ Y +L ++ L+ +++ + + E Sbjct: 143 KPDDARAIIADQSQLQTDSVFKS-----LSQAYKDILDKDYPLALQSLSNIKDSHPDHPE 197 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L +++++ L +G A + + P Sbjct: 198 VLKLLAQLHLSLGDPKAAAQAFDRYVSLYPD 228 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 60/158 (37%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + + + + N+ ++ + + + A + +LQ A+ +L + Sbjct: 754 QALSAIKAHLNVSPNDGAALMMLAERQINSGD-DEAVASYQTLLQKNPNNFVALNNLAYL 812 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAK 219 + L+ A YA A+ PD + Q V +E+ +A+ +N K +N + Sbjct: 813 YLQQNQLDKALEYAESAVKQRPDNAAAVDTYAQVLVAKEEYRKAVKQYDAVVNDKMRNEE 872 Query: 220 EW-NRNRAILL---IARSLENADKGDMIASYHDAIESL 253 + N A+ L ++ +M + A ++ Sbjct: 873 IYLNYVEALFLEGSTLLGKRKLEQREMKTEENIARQAQ 910 Score = 38.0 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 84/253 (33%), Gaps = 25/253 (9%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 N+ L +L ++ L E+QY+ A ++ Q + R GDL A Sbjct: 563 KAPDNQELS-MLYARVLLLEKQYDQALQQFVKFDQNESLPPAYWQGKGQALIRSGDLQGA 621 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 Q + K L I+P+ + +++ + + +L Sbjct: 622 QDHYDKWLSIAPNDKQAVVGKLLLLDNTGKFAEGVKLSEGFLAVRNDTQMQ--LLNTHFL 679 Query: 234 LENADKGDMIASYHDAIESLKLCD---NSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 L N D +Y + LK A+ LI +AE ++ Sbjct: 680 LMNKDMDAGRKAYEAIPQELKSMPIVKGF------RARLLIVDGDFEQAEPNAHAAYEGL 733 Query: 291 PHPEIANIYTHLLSENTVGKL-KRALRLEEIN------KESVESLVIVSKIALEMGSIDQ 343 P+ ++ T+ +L K+ L I +L+++++ + G D+ Sbjct: 734 PNGRNLVLWV-----FTLERLNKKEQALSAIKAHLNVSPNDGAALMMLAERQINSGD-DE 787 Query: 344 AHAKAMLAMKIAP 356 A A ++ P Sbjct: 788 AVASYQTLLQKNP 800 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 72/212 (33%), Gaps = 29/212 (13%) Query: 88 LYTGLMSI---------AAHNIPLARKMHSYVSQQHTFHNE----YLVYLLEVQIALAER 134 L G +++ H + + + M + E +V ++ + + Sbjct: 658 LSEGFLAVRNDTQMQLLNTHFLLMNKDMDAGRKAYEAIPQELKSMPIVKGFRARLLIVDG 717 Query: 135 QYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA-LDISPDAPW 189 + A E + P R ++ E R+ A A KA L++SP+ Sbjct: 718 DFEQAEPNAHAAYEGL---PNGRNLVLWVFTLE--RLNKKEQALS-AIKAHLNVSPNDGA 771 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + ++ + + + A+ + N + L + + + + A Sbjct: 772 ALMMLAERQINSGD-DEAVASYQTLLQKNP----NNFVALNNLAYLYLQQNQLDKALEYA 826 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 ++K ++ A A+ L+++ + RKA Sbjct: 827 ESAVKQRPDNAAAVDTYAQVLVAKEEYRKAVK 858 >gi|320645346|gb|EFX14362.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str. 493-89] gi|320650657|gb|EFX19123.1| cellulose synthase subunit BcsC [Escherichia coli O157:H- str. H 2687] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|299066047|emb|CBJ37228.1| putative protoheme IX synthesis protein (hemY) [Ralstonia solanacearum CMR15] Length = 397 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 116/400 (29%), Gaps = 18/400 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + ++ + + +V + + S +L L LL Sbjct: 1 MRWVFWVALLFAAAVGLALFTELNLSNVVLLYPPYRVDVSLNFVLVSLVLVFVVLHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + PA + + AL + S+ A A ++ Sbjct: 61 LFHHVTGMPARAAAYRERTRILRASAALRDAMESLFAGRFGRAERLAREAQA--WEPQRE 118 Query: 121 LVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ + A + E A + ++ L ++ D + A Sbjct: 119 TAALIGARAAHRMQETDRRDAWMAEVTSPDREQAKLVSMAELLVDAR---DADGALEKIA 175 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLEN 236 + ++ + K W+ + +K + A L + +L Sbjct: 176 QLQAQGARQIQAQRIALRAHQHLKNWNEVLRLTRALEKRNAIHSVLAARLKQMACETLLQ 235 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + D E S + AA + +A+ I+E K + + Sbjct: 236 ERRHDADGLNDFWRELTTEERRSPRIASQAALYFAQLGRTDEAKRIVEDALKAHWDGRLI 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + +++A + + + + + + +A + A+K A Sbjct: 296 RRYADCAVPGKALPLIQQAEKWLAQHPVDADLFYTLGMLCFKEQLWGKAQSSLESALKYA 355 Query: 356 P-------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R L LAQ+ + + ++ QSAL A Sbjct: 356 DADHHGNLRAHAHLALAQLYEQTDRQEEAQRHFRQSALLA 395 >gi|159026574|emb|CAO86506.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 447 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 56/158 (35%), Gaps = 4/158 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y A E +++ E A ++ + +G A +A+ + PD Sbjct: 122 GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPDYELAWAV 181 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Q + A++ + + ++ A+ + + A+ G + E++ Sbjct: 182 KGNQLANLGRYEEALSACEEAIRLKPDYEVAWAV----KGNQLANLGRYEEALSACEEAI 237 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L + +A L + + +A E+ ++ P Sbjct: 238 RLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKP 275 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 78/231 (33%), Gaps = 15/231 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y A E +++ E A ++ + +G A +A+ + PD + Sbjct: 54 GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNG 113 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Q + A++ + + ++ + + + G + E++ Sbjct: 114 KGNQLANLGRYEEALSAYEEAIRLKPDYE----AAWHNKGNQLGNLGRYEEALSACEEAI 169 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + +A L + + +A E+ ++ P E+A + N + L R Sbjct: 170 RLKPDYELAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWA----VKGNQLANLGR 225 Query: 314 A-LRLE------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L + + + + +G ++A + A+++ P Sbjct: 226 YEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPD 276 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 4/124 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G A +A+ + PD Q + A++ + + ++ Sbjct: 20 GRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEEAIRLKPDYE----A 75 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + A+ G + E+++L + A L + + +A E+ Sbjct: 76 AWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLGRYEEALSAYEEAI 135 Query: 288 KVNP 291 ++ P Sbjct: 136 RLKP 139 >gi|330969298|gb|EGH69364.1| peptidase aspartic, active site protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 654 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 92/310 (29%), Gaps = 48/310 (15%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLV---YLLEVQIALAERQYNIA----------HE 141 + ARK + + E L +L E Q A+ A + Sbjct: 116 GSASHARKAIAQAPKNLDYRMMLIEALQRQQHLDEAQAAI--NDAEQALGPQQVLTRRRQ 173 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 ++ + + + GD ++A A +A+ P + +V + Sbjct: 174 AIQEQVAVDK-AATGYK-----ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQ 227 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 +++ A + + N N A LL+ R GD + D ++ + ++ Sbjct: 228 GQYAEARSAATEALA----LNGNDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLP 281 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRAL 315 A + + +A L+K P E+ Y + + + KR Sbjct: 282 LRE-QASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVD 340 Query: 316 RLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 R + ++ S + S A + + P +++F Sbjct: 341 RQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLDYQQTGDLQMPAQQVF-------DTR 393 Query: 372 SHNTDKILYW 381 +D W Sbjct: 394 RAVSDLSREW 403 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 75/234 (32%), Gaps = 27/234 (11%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL---NQKKKNAKE 220 + D + + +A KA+ +P +++ + A + Q + Sbjct: 108 AYANRDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQHLDEAQAAINDAEQALGPQQV 167 Query: 221 WNRNRAILLIARSLENADKGDMIASYHD-------AIESLKLCDNSIMASICAAKSLISQ 273 R R + +++ A G + D A E+++ + +LI+Q Sbjct: 168 LTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQ 227 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 + +A A L + ++R + + + + ++ Sbjct: 228 GQYAEARSA-------------ATEALALNGNDATLLVQRGQMRQRLG-DQDGARQDFAQ 273 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL--YWTQSA 385 A+ +G++ ++ A P + + L + D++ Y+ A Sbjct: 274 -AMAVGNLPLREQASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQA 326 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L +L TG ++A + A + Y L+ Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221 Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 IA QY A + AT + R+GD + A++ +A+ Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234 + + P +A + Y + S A+ L + + + A L +L Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGAL 333 Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264 + + D A +++ +++ + Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369 >gi|324014177|gb|EGB83396.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|332296967|ref|YP_004438889.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema brennaborense DSM 12168] gi|332180070|gb|AEE15758.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema brennaborense DSM 12168] Length = 502 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 23/300 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + +++ + L LL +A A L+ +L + T A Sbjct: 115 GELDKAADITDTLLKKNPDDTDVL--LLSAMLAKASGDTAKKSAALKRILSLDPTNSDAN 172 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVL--AKEWSRAITFLNQK 214 L E + N A+RY K L P A+ V + + + + Sbjct: 173 VELGEEQMLRRNYNQAKRYYLKGLSGDPGHE---GALFGYGQVSYYTGDDEASRSSFEKI 229 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ E ++ A+K + + ++LK D+ + + L Q Sbjct: 230 LESDPE----NSLAYAYLGKLAAEKENYKVATEYIEKALKFDDDIYDYWLDYGQYLRYQG 285 Query: 275 KKRKAEVILEKIWKVNPHPE----IANIY-THLLSENTV--GKLKRALRLEEINKESVES 327 A E W+ E +A Y L E L ++ E+N + + Sbjct: 286 DFAGA----ESAWRRAAELESDYFLAYAYLAGLFDEENRFDEALAMYRKVIELNPKYYFA 341 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + A + LA + + L+ T + A+ Sbjct: 342 YESLGMFAWHENDFAEVRRAFALARSMNEENVSYPLMIAAAYLKEGKTKESRELLGKAMR 401 >gi|320639846|gb|EFX09440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. G5101] gi|320655851|gb|EFX23774.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|294627349|ref|ZP_06705934.1| porphyrin biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598304|gb|EFF42456.1| porphyrin biosynthesis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 421 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 110/355 (30%), Gaps = 19/355 (5%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G Y + L IL L LL+ Sbjct: 7 VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K +KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDAEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178 L V++A A A + + + T + + + D +A A Sbjct: 120 ALAS--AVRVADARGDEAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINALDSAN 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + T A+ Q + + + Q ++ A L L+ +D Sbjct: 178 AQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQTLLQASD 237 Query: 239 KGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + + ++L+ + A + AA E L+ W + + Sbjct: 238 ANALAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDES----LVR 293 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y L E + A R +S L+ ++++A QA A+ Sbjct: 294 LYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRAI 348 >gi|320661633|gb|EFX29048.1| cellulose synthase subunit BcsC [Escherichia coli O55:H7 str. USDA 5905] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 >gi|291284902|ref|YP_003501720.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str. CB9615] gi|290764775|gb|ADD58736.1| Cellulose synthase operon protein C [Escherichia coli O55:H7 str. CB9615] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 >gi|47211505|emb|CAF94124.1| unnamed protein product [Tetraodon nigroviridis] Length = 783 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 75/255 (29%), Gaps = 44/255 (17%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A+ Y KAL I+P + + + A + L + + L Sbjct: 439 PEEAESYYRKALAINPQHNRALFNLGNLFKSQGKEKEAESLLKDSIHFGPHFANAYSSLA 498 Query: 230 IARSLE------------------------------NADKGDMIASYHDAIESLKLCDNS 259 + + D G+ + ++++L Sbjct: 499 SLYAEQKRFFEAKEVYLKGIEKCPENSDLHNNYGVFLVDTGEDERAVDHYQQAIRLKPTH 558 Query: 260 IMASICAAKSLISQNKK-------RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 +A + + L NK ++A + +K + P + +Y + + L+ Sbjct: 559 YIAMVNLGRLLRLNNKNQEAEFWYKRALRVTKKADILTP---LGALYYN--TGRYEEALQ 613 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRKEIFLLLAQIEQAN 371 + ++ + + +++ +A + K E + LL+ I + Sbjct: 614 VYREATSLQPDNTDIWLAFAQVLAVADRSGEAEKLTLEIISKEISCVECYRLLSAI-YSK 672 Query: 372 SHNTDKILYWTQSAL 386 N + L AL Sbjct: 673 RGNYTEALGALDRAL 687 >gi|260776372|ref|ZP_05885267.1| hypothetical protein VIC_001756 [Vibrio coralliilyticus ATCC BAA-450] gi|260607595|gb|EEX33860.1| hypothetical protein VIC_001756 [Vibrio coralliilyticus ATCC BAA-450] Length = 389 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 51/287 (17%) Query: 98 HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + + + + +A + A + E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGFLDRAEKIFEQLVDEPDHREA 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + +V Y +EW +AI + Q Sbjct: 143 AL----------------------------------QQLVSIYQQTREWGKAIQYATQLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K ++ R A +++ GD + +L + ASI K + Sbjct: 169 KLGRKRMRTSIAHFWCELAMQEKADGDNSRAIQHFKRALSEDPKCVRASIALGKLYLEVE 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + +E + + P +A+ Y HL E + R + S E Sbjct: 229 DYAQTIKYMEMVIEQDIDFISEVLPTLADCYHHLGQEEELLDFLR-QCIVSKAGVSAE-- 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370 ++++++ + A + P + L+ A E+ Sbjct: 286 LMLAQMVAQHEGSGSAQELLTRQLVKNPTMKGFYRLMDYHLADAEEG 332 >gi|218665769|ref|YP_002425648.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517982|gb|ACK78568.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 695 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 84/279 (30%), Gaps = 25/279 (8%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 +F + L+ +A A + + A E L P +L + G L Sbjct: 39 LASFPGQPDALHLQGLMAHAYGRLDPAIEYLRQACASPQAAAVYWSNLAEMLRQRGRLAE 98 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 +R A +AL P + + + +L + + +L Sbjct: 99 GERAAREALARDPQLSGAWNNLGILLQEMGRFDESREYLERVR----TAEPKDPKVLNNL 154 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D A+ +++ L AK L + + A + ++PH Sbjct: 155 GNTCLRQRDFSAAEQYWRQAMSLDPAYPQPYSNLAKLLTDRGEIEAAIDAGRRAITLDPH 214 Query: 293 PEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 + + Y +L N L+ L ++ ++ + + E + +A Sbjct: 215 --LTDAYINLAAAEQERHNPDAALRWVEALLAFQPQNAQAWSTKATLLKEAERLPEALQA 272 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 A A++ AP S + + AL Sbjct: 273 AEQAVQHAP--------------ESADAEYARGSVLQAL 297 >gi|212212972|ref|YP_002303908.1| tetratricopeptide repeat protein [Coxiella burnetii CbuG_Q212] gi|215918989|ref|NP_819562.2| tetratricopeptide repeat protein [Coxiella burnetii RSA 493] gi|206583874|gb|AAO90076.2| tetratricopeptide repeat family protein [Coxiella burnetii RSA 493] gi|212011382|gb|ACJ18763.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuG_Q212] Length = 389 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + R G L+ A+R + +++ + Sbjct: 85 GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 144 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ Y K+W +AI + + + A + + D G + Sbjct: 145 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAEQMIDTGRTSQAVQCL 204 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + N + AS+ + R+A +++ + +P Sbjct: 205 KRAQAIDSNCVRASLIQGRLESENAHYREAIRCYKRVVEQDP 246 >gi|59801987|ref|YP_208699.1| hypothetical protein NGO1662 [Neisseria gonorrhoeae FA 1090] gi|239999749|ref|ZP_04719673.1| hypothetical protein Ngon3_09766 [Neisseria gonorrhoeae 35/02] gi|240014906|ref|ZP_04721819.1| hypothetical protein NgonD_09753 [Neisseria gonorrhoeae DGI18] gi|240017354|ref|ZP_04723894.1| hypothetical protein NgonFA_09371 [Neisseria gonorrhoeae FA6140] gi|240081497|ref|ZP_04726040.1| hypothetical protein NgonF_09348 [Neisseria gonorrhoeae FA19] gi|240113776|ref|ZP_04728266.1| hypothetical protein NgonM_09471 [Neisseria gonorrhoeae MS11] gi|240118734|ref|ZP_04732796.1| hypothetical protein NgonPID_09822 [Neisseria gonorrhoeae PID1] gi|240121976|ref|ZP_04734938.1| hypothetical protein NgonPI_09478 [Neisseria gonorrhoeae PID24-1] gi|240124273|ref|ZP_04737229.1| hypothetical protein NgonP_10113 [Neisseria gonorrhoeae PID332] gi|240126484|ref|ZP_04739370.1| hypothetical protein NgonSK_09818 [Neisseria gonorrhoeae SK-92-679] gi|254494536|ref|ZP_05107707.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|260439733|ref|ZP_05793549.1| tetratricopeptide repeat protein [Neisseria gonorrhoeae DGI2] gi|268595562|ref|ZP_06129729.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268597597|ref|ZP_06131764.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268599848|ref|ZP_06134015.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268604448|ref|ZP_06138615.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268682902|ref|ZP_06149764.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268685068|ref|ZP_06151930.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|59718882|gb|AAW90287.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226513576|gb|EEH62921.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268548951|gb|EEZ44369.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268551385|gb|EEZ46404.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268583979|gb|EEZ48655.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268588579|gb|EEZ53255.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268623186|gb|EEZ55586.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268625352|gb|EEZ57752.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] Length = 389 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + A+ A+E+ K C Sbjct: 169 QLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIEH 228 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 279 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 331 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|191170612|ref|ZP_03032165.1| cellulose synthase operon protein C [Escherichia coli F11] gi|300976750|ref|ZP_07173569.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] gi|190909420|gb|EDV69006.1| cellulose synthase operon protein C [Escherichia coli F11] gi|300308487|gb|EFJ63007.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|117924125|ref|YP_864742.1| hypothetical protein Mmc1_0817 [Magnetococcus sp. MC-1] gi|117607881|gb|ABK43336.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 594 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/273 (11%), Positives = 75/273 (27%), Gaps = 54/273 (19%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + L + L ER + A +++ + + + + D Sbjct: 64 ERLADATATFSFLVGHLLLQERDWKGAEAAFTQVVESDPGAVESQVMVARLAMQGKDYEK 123 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A +A K +D++P+ + + + K E LL Sbjct: 124 ALVHARKVVDLAPEHELARRT--------------LATILRVLKRYPEAVVQYEELL--- 166 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK------- 285 K + + A+ + ++ ++E Sbjct: 167 ---------------------KQDPDDSGVRLVLAQLYGRIGRAAESSKVVEALLSHPLI 205 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 W+ E+A L ++ L R + E +E + + + ++ ++A Sbjct: 206 GWRA----ELAVGRGWLHQDDQAQALAAFERARAMAPEQLEPTLALGSVLQDLKKNEEAE 261 Query: 346 AKAMLAMKIAPRK-----EIFLLLAQIEQANSH 373 A + PR + LL ++ Sbjct: 262 AIYRRYLDEHPRSEVVHTRLGRLLLNVDDREGA 294 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 92/274 (33%), Gaps = 18/274 (6%) Query: 93 MSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 +++ A+ + ++ + + L + ++ A L Sbjct: 211 LAVGRGWLHQDDQAQALAAFERARAMAPEQLEPTLALGSVLQDLKKNEEAEAIYRRYLDE 270 Query: 150 -PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P + L + D A + ++P + + + + + A+ Sbjct: 271 HPRSEVVHTR-LGRLLLNVDDREGALAVFSNLQRLAPSSVQAHLSSAFILLSQERYEEAL 329 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-A 267 L + E + R L ++LE + + + ++ L + S A Sbjct: 330 GALRLAEVQQPENSSIRYYL--GQALEYLKRDEEAVGEYAKVQ---LGETFYPESQIRIA 384 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKES 324 +K++ I+E ++K +P +A + L ++ ++ +++ E Sbjct: 385 YLQSDLGRKKEGVEIVESLYKSHPTRVDVVLALNFLQLQNDQYEQVIQSTEEGLKLDPE- 443 Query: 325 VESLVIVSKI-ALE-MGSIDQAHAKAMLAMKIAP 356 ES + ++ A + +G +A A +K+ P Sbjct: 444 -ESRFLFNRAMAYDKLGKWKEAEADLEAYIKVNP 476 >gi|269849702|sp|Q8X5M0|BCSC_ECO57 RecName: Full=Putative cellulose synthase operon protein C; Flags: Precursor Length = 1154 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 349 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 406 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 407 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 466 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 467 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 526 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 527 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 583 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 584 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 637 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 638 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 689 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 581 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 640 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 641 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 700 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 701 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 735 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 254 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 308 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 309 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 368 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 369 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 412 >gi|168746931|ref|ZP_02771953.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4113] gi|168753343|ref|ZP_02778350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4401] gi|168765938|ref|ZP_02790945.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4486] gi|168772515|ref|ZP_02797522.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4196] gi|168779674|ref|ZP_02804681.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4076] gi|168797361|ref|ZP_02822368.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC508] gi|195935058|ref|ZP_03080440.1| cellulose synthase subunit BcsC [Escherichia coli O157:H7 str. EC4024] gi|208808289|ref|ZP_03250626.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4206] gi|208813880|ref|ZP_03255209.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4045] gi|208820438|ref|ZP_03260758.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4042] gi|209396215|ref|YP_002273011.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4115] gi|187771657|gb|EDU35501.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4196] gi|188018261|gb|EDU56383.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4113] gi|189002386|gb|EDU71372.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4076] gi|189359264|gb|EDU77683.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4401] gi|189364597|gb|EDU83016.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4486] gi|189379934|gb|EDU98350.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC508] gi|208728090|gb|EDZ77691.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4206] gi|208735157|gb|EDZ83844.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4045] gi|208740561|gb|EDZ88243.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4042] gi|209157615|gb|ACI35048.1| cellulose synthase operon protein C [Escherichia coli O157:H7 str. EC4115] gi|326339997|gb|EGD63804.1| Cellulose synthase operon protein C [Escherichia coli O157:H7 str. 1125] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWALQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L AL R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWALQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|161830717|ref|YP_001596462.1| tetratricopeptide repeat protein [Coxiella burnetii RSA 331] gi|161762584|gb|ABX78226.1| tetratricopeptide repeat ptrotein [Coxiella burnetii RSA 331] Length = 388 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + R G L+ A+R + +++ + Sbjct: 84 GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ Y K+W +AI + + + A + + D G + Sbjct: 144 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAEQMIDTGRTSQAVQCL 203 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + N + AS+ + R+A +++ + +P Sbjct: 204 KRAQAIDSNCVRASLIQGRLESENAHYREAIRCYKRVVEQDP 245 >gi|86606356|ref|YP_475119.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gi|86554898|gb|ABC99856.1| tetratricopeptide repeat protein [Synechococcus sp. JA-3-3Ab] Length = 312 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 8/162 (4%) Query: 201 AKEWSRAI-TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 +W A L + E R + + L +L A G + ++ + S Sbjct: 34 RGKWDPARAQVLLRVPLPNGELMRAQGLQLATDALRLAQFGQTEEALRRLQLAVAMVPTS 93 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRA 314 + +A +L++ + P + Y L + + Sbjct: 94 SELLYVLGNVYLELGNSAQAVQVLQRARALAPQDGDVLYSLGVAY--LRQGSYFAAAETL 151 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 R + +S + + L + D+A + +++ P Sbjct: 152 ERAVALQPDSPNARFQLGNAYLMLDQWDRARQEYEKTLELDP 193 >gi|229126932|ref|ZP_04255943.1| hypothetical protein bcere0015_13890 [Bacillus cereus BDRD-Cer4] gi|228656532|gb|EEL12359.1| hypothetical protein bcere0015_13890 [Bacillus cereus BDRD-Cer4] Length = 434 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|227819083|ref|YP_002823054.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] gi|227338082|gb|ACP22301.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] Length = 579 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 89/299 (29%), Gaps = 31/299 (10%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+ A A + + E ++ + A E ++P Sbjct: 277 LIEAATGAHLWAERYDRSLDDIFAVQEEVAQMIVAA----LFGRIQEAD--FERSSRMPT 330 Query: 152 TREFA----VYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 A + L +F + A KA+ + P + + W+ Sbjct: 331 ASLTAYDCLLRGLAHFRAYAEDANQRACELFEKAVALDPRYALAHSYLALVRITFHGWAT 390 Query: 207 A----ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A + + + A E + + S + + + A ++ L N A Sbjct: 391 APTEILDTAFAEARRATELDPQESRCHRILSEICLLRREYDMAEEHACQAFDLNPNDADA 450 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI------ANIYTHLLSENTVGKLKRAL 315 + + L + + +A LE ++NP HP +Y+ LKR Sbjct: 451 MMEKGRVLALRGRPEEALNCLEAAVRLNPLHPPWYNSSFGIALYSLRRFGEAARALKRIP 510 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ---IEQAN 371 S V+ ++G +A A +++ P + + +E+A Sbjct: 511 DPGTW------SRARVAACYAQLGKSAEAQAVVAEVLRLQPDFSTAEYMRKSVLLERAE 563 >gi|115532692|ref|NP_001040861.1| O-Linked GlcNAc Transferase family member (ogt-1) [Caenorhabditis elegans] gi|85662562|gb|ABC71824.1| O-linked glcnac transferase protein 1, isoform b [Caenorhabditis elegans] Length = 973 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ + N +V+ + + ++A + + + + A +L Sbjct: 169 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANA 228 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A++ KAL++ P + + A + + E+ Sbjct: 229 LKEKGSVVEAEQMYMKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 286 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + E++++ A +L A Sbjct: 287 --AAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACY 344 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I+ N ++ ++ + ++ ++ Sbjct: 345 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYSTALKLKPDFPDAYCNLA 396 >gi|307544470|ref|YP_003896949.1| hypothetical protein [Halomonas elongata DSM 2581] gi|307216494|emb|CBV41764.1| TPR domain protein [Halomonas elongata DSM 2581] Length = 572 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 87/318 (27%), Gaps = 40/318 (12%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + PLA + S L LL ++A Y A + A A Sbjct: 27 DAPLADPLASAPPITQGLDARGLSTLLVAELAGQRGDYQRASRGYLESAERYAAANLAER 86 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + + D +R A + ++P + +W A L + Sbjct: 87 ATL-AARFDEDSEQLERAARRWQQLAPGDTAPARLLADLAAQKGDWDEA---LTRHLDII 142 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHD---AIESLKLCDNSIMASICAAKSLISQNK 275 + + + +LE + + A + A + AA L + + Sbjct: 143 ELHGSRDLVPFLESALEAGAPPAPLLARLRDFPATPQTRHDIELATALLEAANGLTTSAR 202 Query: 276 KRKAEVILEK-----IWKVNPH-------PEIANIYT--------------------HLL 303 +R A + E +W++ P+ A + Sbjct: 203 QRLARLADEAPEQPGLWRIRAAVSLDAGAPDHAETMARRGLEHTPGDPRLILLLAQAEIR 262 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 N L E + +S + ++++ LE G A + L Sbjct: 263 QGNITAAEANTDALLEDHGDSPDLRQALAQLYLEEGHTSPARRLLLPLTDDDATPSTVFL 322 Query: 364 LA-QIEQANSHNTDKILY 380 + I + + +LY Sbjct: 323 MLGAIAEEEGEIDNALLY 340 >gi|170018241|ref|YP_001723195.1| cellulose synthase subunit BcsC [Escherichia coli ATCC 8739] gi|169753169|gb|ACA75868.1| cellulose synthase operon C domain protein [Escherichia coli ATCC 8739] gi|323939490|gb|EGB35699.1| cellulose synthase operon protein C [Escherichia coli E482] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|115378151|ref|ZP_01465325.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|115364825|gb|EAU63886.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] Length = 786 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 34/297 (11%) Query: 98 HNIPLARKMHSYVSQ-QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 ++ +A+ + Q N+Y ++ L Q L + A + A Sbjct: 122 GDVAIAKFQRYLAQRPQKLAVNDYQIHELIGQGHLMRKDVAAARASFQQAQAGRPESVTA 181 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L G A ++ P A E + + ++ + + A Q Sbjct: 182 QMGLASVLEMEGKDEEALALVEGLVERFPQAKEPKERLGRMFLRSGNVAGAE---TQALA 238 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 K A LL+ + + + + L++ + A I +K+L +Q + Sbjct: 239 LVKLEATPAARLLLGE--VRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRN 296 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLV 329 +A LE + + N+ + + R RL E+ + V Sbjct: 297 EEAIKYLEAALEA----DGGNLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHV 352 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 ++ G DQA A+++ P + W AL Sbjct: 353 LLGADHFATGQWDQAIEDYANALRVEP-----------------DHAGAQQWLAHAL 392 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 98/307 (31%), Gaps = 30/307 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-----LAERQYNIAHEKLEMMLQIPAT 152 + LA+K + E ++ QIA A+ + A + LE L+ Sbjct: 253 GEVRLAQKQPKEAEAEFRKVLEMAPGVVAAQIAVSKALQAQGRNEEAIKYLEAALEADGG 312 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 SL + R G A + ++++P + + +W +AI Sbjct: 313 NLELWASLGSVNRRAGRFQRAVEVHRRLVELAPQQALGHVLLGADHFATGQWDQAIEDYA 372 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--- 269 + + + L A + + D DA+ L+ + ++ A + Sbjct: 373 NALRVEPDHAGAQQWLAHALAHRARGRADTNR-LDDAVRDLRRAYDLERSAAMARRLGAA 431 Query: 270 LISQNKKRKAEVILEKI-------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 L+ Q +A +LE+ W+ + Y HL N L+ ++ E+ + Sbjct: 432 LLEQRAFAQARPVLEQAVTLEGSTWREH----WMLGYAHLGEGNAEAALRAFIQAEKRTE 487 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI----------FLLLAQIEQANS 372 E + + AL + + + P K LL + + + Sbjct: 488 EPADLADVSVGAALAEVELGRVDDAVERLSEPGPSKAARQLAEANLPLMLLRRALTRLET 547 Query: 373 HNTDKIL 379 + + Sbjct: 548 ADVENAR 554 >gi|295688256|ref|YP_003591949.1| tetratricopeptide repeat-containing protein [Caulobacter segnis ATCC 21756] gi|295430159|gb|ADG09331.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter segnis ATCC 21756] Length = 684 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 81/267 (30%), Gaps = 19/267 (7%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAV 157 + LA + + + + LL + A E + + + P + Sbjct: 37 DPRLAAEQARAIL-EVVPRHADTTRLL-ATALRLAGETEAALETIAPLAKALPNLPLAQL 94 Query: 158 Y-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L E R+G A + +A + P + + L + + A L ++ + Sbjct: 95 ELGLCLE--RLGRTAEAAQAFDRASALEPRLSEAWRGLSENLALLGDEAGAERALARQLR 152 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + L+ + + + + E LK + A A++ + Sbjct: 153 ASTRDP------LLIEAATALGEDRLGEAERLLRERLKADPADVAAIRMLAETGARLGRY 206 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331 AE +L + ++ P A +L L RL + + Sbjct: 207 ADAEGLLTRCLELA--PNFAAARHNLATMLYRQNKNAEALAEIQRLTDKEPRHPGYANLR 264 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358 + I +G +QA A + P + Sbjct: 265 AAILARLGEYEQAIAVCERMLADYPNQ 291 >gi|52841653|ref|YP_095452.1| tetratricopeptide repeat protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54297333|ref|YP_123702.1| tetratricopeptide repeat protein [Legionella pneumophila str. Paris] gi|52628764|gb|AAU27505.1| TPR domain protein (heat shock protein) N-acetylglucosaminyl transferase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53751118|emb|CAH12529.1| hypothetical protein lpp1378 [Legionella pneumophila str. Paris] Length = 389 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 21/204 (10%), Positives = 68/204 (33%), Gaps = 45/204 (22%) Query: 93 MSIAA-----HNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKL 143 +++ + + A ++H + + E L+ L Q ++ ++ A Sbjct: 73 LALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMAL--GQDYMSAGVFDRAERIF 130 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +++ G +++ + ++ Y K Sbjct: 131 LEVVE------LG-----------GSRDTS----------------SLQGLLAIYQQEKA 157 Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 W +A+ + + + ++ A + + M + + +++ + S+ A Sbjct: 158 WEKALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRA 217 Query: 263 SICAAKSLISQNKKRKAEVILEKI 286 S+ A I + + ++A L+++ Sbjct: 218 SLMNATIEIKEGRYKQAIRSLKRV 241 >gi|218697240|ref|YP_002404907.1| cellulose synthase subunit BcsC [Escherichia coli 55989] gi|218353972|emb|CAV00437.1| cellulose synthase subunit [Escherichia coli 55989] Length = 1157 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L + + AV L + I D+ + + A +A Sbjct: 410 QTLHMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 >gi|239618068|ref|YP_002941390.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF 19.5.1] gi|239506899|gb|ACR80386.1| Tetratricopeptide TPR_2 repeat protein [Kosmotoga olearia TBF 19.5.1] Length = 355 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 15/189 (7%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLK 254 Y+ + I +L + + A++ +L A + G + + L Sbjct: 138 LYIEEGKIDEGIKWLEEAIEKNP------ALVSAYSALGQAYFNMGKYEEAAQYWEKELI 191 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVG 309 L ++ A + + KA +L+ + +P+ +A +Y + E Sbjct: 192 LVPGRVVTYFMLADAYSLSGQNDKAINVLKTLISNDPNNLLARYQLIELYREIGEEEEAK 251 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 KLK L I + I +++ E G+ D+ ++ +P + LL I Sbjct: 252 KLK-MEILNAI-PTHTNDIEIWARVQFEHGNYDRVKEIIEKFVETSPDMQHLKLLLVIPY 309 Query: 370 ANSHNTDKI 378 A + +T K Sbjct: 310 AKTGDTQKA 318 Score = 44.2 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 49/173 (28%), Gaps = 18/173 (10%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 Y AL A + + + + Y + Q + A L Sbjct: 165 AYSALGQAYF--NMGKYEEAAQY--WEKELILVPGRVVTYFMLADAYSLSGQNDKAINVL 220 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-----WVTEAVVQQY 198 + ++ A Y L IG+ A++ + L+ P W + Sbjct: 221 KTLISNDPNNLLARYQLIELYREIGEEEEAKKLKMEILNAIPTHTNDIEIWA-----RVQ 275 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + R + + + + + + +L+I + GD + E Sbjct: 276 FEHGNYDRVKEIIEKFVETSPDMQHLKLLLVIPYAK----TGDTQKACRLLKE 324 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 23/206 (11%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 E+ A FL + +A + + ++G + E+++ Sbjct: 104 ALADKSEYGEAQAFLQMLYDAGLD----QAAMAEMKGTLYIEEGKIDEGIKWLEEAIEKN 159 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIY-THLLSENTVGK 310 + A ++ + K +A EK + P +A+ Y ++ + Sbjct: 160 PALVSAYSALGQAYFNMGKYEEAAQYWEKELILVPGRVVTYFMLADAYSLSGQNDKAINV 219 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE-- 368 LK L + ++ + + ++ E+G ++A M + P IE Sbjct: 220 LK---TLISNDPNNLLARYQLIELYREIGEEEEAKKLKMEILNAIPTHTN-----DIEIW 271 Query: 369 ---QANSHNTDKILYWTQSALHAMPD 391 Q N D++ + + PD Sbjct: 272 ARVQFEHGNYDRVKEIIEKFVETSPD 297 >gi|212218845|ref|YP_002305632.1| tetratricopeptide repeat protein [Coxiella burnetii CbuK_Q154] gi|212013107|gb|ACJ20487.1| tetratricopeptide repeat family protein [Coxiella burnetii CbuK_Q154] Length = 389 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + R G L+ A+R + +++ + Sbjct: 85 GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 144 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ Y K+W +AI + + + A + + D G + Sbjct: 145 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAQQMIDTGRTSQAVQCL 204 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + N + AS+ + R+A +++ + +P Sbjct: 205 KRAQAIDSNCVRASLIQGRLESENTHYREAIRCYKRVVEQDP 246 >gi|158299843|ref|XP_319863.4| AGAP009112-PA [Anopheles gambiae str. PEST] gi|157013713|gb|EAA14710.5| AGAP009112-PA [Anopheles gambiae str. PEST] Length = 886 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 78/287 (27%), Gaps = 35/287 (12%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +L Q +Y A E L+ L P + Y+L D N A K Sbjct: 556 LGSVLSAQ-----GRYQEAKEALKAALNHRPNMADV-HYNLGILLQNQQDYNEAVESFRK 609 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-------NQKKKNAKEWNRNRAILLIAR 232 A+ P + + A + L ++ R L+ Sbjct: 610 AIRFRPSLALAYLNLGTSLIALGRCQEAASVLREGTKLDGAGLRDRAAHENARISALLQL 669 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKV 289 AD+G + + E+L + N+ +AE + Sbjct: 670 GNLYADQGKLQRALAIYREALHTLPERYPPQGIYHRLGDIFARLNQWSEAERFQRAALEA 729 Query: 290 NP-HPEIAN-----IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 P H IA S T + R + ++ ++ Sbjct: 730 QPDH--IAAHLSYGTMLARNSSRTSEAEQWFRRALRLAPNDASVHHHYAEFLSSQRRTEE 787 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + A ++AP ++ L++A L L A Sbjct: 788 AFQYRVKAAELAP-EDYALVMAA---------ASSLRLLDRKLEAER 824 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 20/163 (12%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A+ + AH ML ++R + A+++ +AL ++P+ Sbjct: 726 ALEAQPDHIAAHLSYGTMLARNSSR----------------TSEAEQWFRRALRLAPNDA 769 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 V + + A + K A+ + A+++ A S + + Sbjct: 770 SVHHHYAEFLSSQRRTEEA---FQYRVKAAELAPEDYALVMAAASSLRLLDRK-LEAERW 825 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++KL A L + ++A + ++ P Sbjct: 826 YRQAVKLRPQEARAHTNLGAILHLLGRTQEAANSYREALRLQP 868 >gi|195382543|ref|XP_002049989.1| GJ20442 [Drosophila virilis] gi|194144786|gb|EDW61182.1| GJ20442 [Drosophila virilis] Length = 1050 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 262 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 321 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + N A L + ++G + + +++L++ Sbjct: 322 ALKEKGQVKEAEECYNTALR----LCSNHADSLNNLANIKREQGFIEEATRLYLKALEVF 377 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 + A A L Q K ++A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 378 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 435 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 436 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 481 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 99/300 (33%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLV 122 L + GY L L++ ++ A + + Q + L Sbjct: 127 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMESAVQAYITALQYNPELYCVRSDLG 184 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 185 NLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 239 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 240 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 295 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTH 301 + +++L N A A +L + + ++AE ++ + H + N + Sbjct: 296 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECYNTALRLCSNHADSLNNLAN 355 Query: 302 LLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E +L LE + + ++ + + G + +A A++I P Sbjct: 356 IKREQGFIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT 413 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + + H + L L I + A L++ A Sbjct: 327 GQVKEAEECYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 384 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I P + ++ S A+ + + Sbjct: 385 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 444 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 445 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 493 >gi|149377376|ref|ZP_01895120.1| TPR domain protein [Marinobacter algicola DG893] gi|149358300|gb|EDM46778.1| TPR domain protein [Marinobacter algicola DG893] Length = 389 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 88/245 (35%), Gaps = 29/245 (11%) Query: 194 VVQQYVLAKEWSRA---ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 +++ Y KEW +A L +A+ + + A + ++ + D + + Sbjct: 148 LIELYQQEKEWGKAGQVARTLTTGDHDARMY-KMLAYITCEQAEDALKHDDRWMAQKLSK 206 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSE 305 E+L+ + + AS K LI Q R A K++ N PE + Sbjct: 207 EALEYDRSCVRASFIMMKLLIRQGSYRDAASQSLKVFDQN--PEFGSEAVDRLMKLEREH 264 Query: 306 NTVGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 VG+L +L + + + ++++ + A +++ P L Sbjct: 265 GDVGRL--VKKLGKFYEAWPSTSLLLALVEAVERTSGRMAAIELLRRELEVRPSVRGLLR 322 Query: 364 LAQI---EQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSS---VWLPLSPISKTLCY 417 L ++ E+ + + +++ + A P++ + S WL P K Sbjct: 323 LVELAGYEKGMTTDEGRLVSRIGHLILANR-PVYRCVNCGFSGQQLHWL--CPSCK---- 375 Query: 418 FEWKI 422 +W+ Sbjct: 376 -QWET 379 >gi|262197325|ref|YP_003268534.1| hypothetical protein Hoch_4143 [Haliangium ochraceum DSM 14365] gi|262080672|gb|ACY16641.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 2837 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 80/302 (26%), Gaps = 38/302 (12%) Query: 86 KALYT---GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 AL G+ + + LA + Q + ++ + + A Sbjct: 1900 DALTRTAKGVPAPGSGVGDLAALLIRLADAQVSAGDKDAAQASLARALTLVPDHPTALAA 1959 Query: 143 LEMMLQIPATREFAVYSLYFESC---------------------RIGDLNSAQRYATKAL 181 +++ + E+ R+ D+ A+ L Sbjct: 1960 QARLVEDERDPRAFAEARLREAEDLEDIDAKVAALMDAGLALRDRLDDIEGARAAFEAVL 2019 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P T A+ + +A L + +++ A + + G Sbjct: 2020 QVLPYQSEATWALAGLVEQGGDPVQAAQVLESRLEDSSLEPAEAARIHTQLAALARQAGV 2079 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVILE---KIWKVNP 291 A+ +L+ + A I A L + R+A LE Sbjct: 2080 EAAAESHLDGALRAVPGHLPAIIARADLLGEAERFEDLEAFLREALPRLEDAPAATLAEL 2139 Query: 292 HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + +A HL + L A +L ++ + + + + +A Sbjct: 2140 NRRLAVACEHLGRDDEAYQILLAADKL---HRGHLMVKLALGENRYRAKRWREAALHLSA 2196 Query: 351 AM 352 Sbjct: 2197 LA 2198 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 65/196 (33%), Gaps = 22/196 (11%) Query: 190 VTEAVVQQYVLA-KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A + + + A W+ L ++ + + AIL SL G Sbjct: 1801 SAYAALDRQLGALGRWAELADILRRRAALTRAPEKRAAILRRRASLLVDRLGAPEEGAAA 1860 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-------IWKVNPHP-----EIA 296 + L ++ ++LI+ + R+A +L+ K P P ++A Sbjct: 1861 LRHARSLTPDAPGLESELVQALIAAGRTREAASLLDTRVDALTRTAKGVPAPGSGVGDLA 1920 Query: 297 NIYTHLLS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + L + L RAL L + ++ + + + + + +A + Sbjct: 1921 ALLIRLADAQVSAGDKDAAQASLARALTLVPDHPTALAAQARLVEDERDPRAFAEARLRE 1980 Query: 349 MLAMKIAPRKEIFLLL 364 ++ ++ L+ Sbjct: 1981 AEDLEDI-DAKVAALM 1995 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 23/194 (11%), Positives = 52/194 (26%), Gaps = 20/194 (10%) Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +Y R A+ +ALD+ P A+ + + + + RA L ++ Sbjct: 2213 GLYHAAQAEIRSLRPEKARPLYERALDLKPKFTPALHALAELAMESGAYERAAELLLRQA 2272 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-IMASICAAKSLISQ- 273 + +E + + + D + ++ K L Q Sbjct: 2273 EATEEPSERMRLFEALGDMALETLSDEARALSCYQAAVDAASPLEAKHVALLEKLLRRQE 2332 Query: 274 --NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKESVESLV 329 R A A + + + R E + + + Sbjct: 2333 AKGDHRGAART-------------AELMASF-GSDGPSRASRYTSAAENYLAVGEPDKAL 2378 Query: 330 IVSKIALEMGSIDQ 343 ++ A++ D Sbjct: 2379 AAARNAVDADPYDL 2392 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 65/253 (25%), Gaps = 42/253 (16%) Query: 171 NSAQRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNAKEW 221 + + A + ALD P + + Y A + A K + Sbjct: 81 ATQRERAEEDLGRALDADPAHEDAAGLLAELYGDAGRQAEAAELFENELAALKAQAEALP 140 Query: 222 NRNRAILLIAR--------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 R RA + R +L + G + + + L A A S Sbjct: 141 ERKRAPINTRRGERHRHLAALWERELGRVDRALEHWQRAWHLEPERTDAIEAARNIYASL 200 Query: 274 NKKRKAEVILEKIW---------KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 + E K E+A + Sbjct: 201 GDDSMVARLYEAQLEVMRKGGDDKARGQLELALGRIRAREGRMDDAATHLEEALRLLPGL 260 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI------EQANSHNTDKI 378 E+L ++++ S ++A R+ LL ++ + + + Sbjct: 261 DEALEALAEVYTSAASAERAEH----------RERACTLLLELGKRRLASASEPADEEAG 310 Query: 379 LYWTQSALHAMPD 391 + + + AL P Sbjct: 311 IAYLRRALGVQPG 323 Score = 36.5 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 8/166 (4%) Query: 96 AAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A A +M ++ H + L L E + E + + P + Sbjct: 948 APGEAIKALEEMIREIAPGHLDAHRALRRLYEARGDFEAAVRTAERELY--LSRDPDDKL 1005 Query: 155 FAVYSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 L D A + + L + D A V Y ++W + L Sbjct: 1006 A--RGLEIGRLCRDQLHDPTRAIQAFERVLYLKGDHEVALVAAVDLYARVEDWPSHVRTL 1063 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 A E ++ + D ++ + + Sbjct: 1064 EALVAQASEGQTRADLMTRIAQVTAERLDDRAGAFSWYRRAHEQAP 1109 >gi|189346154|ref|YP_001942683.1| hypothetical protein Clim_0617 [Chlorobium limicola DSM 245] gi|189340301|gb|ACD89704.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM 245] Length = 579 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 61/198 (30%), Gaps = 8/198 (4%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 A+ + + + AR + + YL L +A + Y A Sbjct: 91 EAARDHAISASFLELGVIDS--ARVYAEKAAAGEPENRYYLRML--AAVAHLMKDYPRAV 146 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 E ++Q+ + L E GD A + L + P V+ + Sbjct: 147 EIYRQLVQLEPQNSDYLTLLALEHIAAGDPEQALGIFQRLLSLDPSNNSTRSQVLLLEIK 206 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 K + AI L+ + +E R + L +E G ++ + I + + Sbjct: 207 LKHYENAIETLSALIEEGEEKERLKLTLGELY-VETGQNGPASKTFREIIAANSR---FV 262 Query: 261 MASICAAKSLISQNKKRK 278 A + + + + Sbjct: 263 PAWLALLELSVKSGDSGR 280 >gi|218896548|ref|YP_002444959.1| TPR domain protein [Bacillus cereus G9842] gi|228900199|ref|ZP_04064431.1| hypothetical protein bthur0014_14050 [Bacillus thuringiensis IBL 4222] gi|218542739|gb|ACK95133.1| TPR domain protein [Bacillus cereus G9842] gi|228859469|gb|EEN03897.1| hypothetical protein bthur0014_14050 [Bacillus thuringiensis IBL 4222] Length = 420 Score = 51.1 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 294 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 295 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEDLIAIVERAIDSGE 336 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 337 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 367 >gi|320193957|gb|EFW68590.1| Cellulose synthase operon protein C [Escherichia coli WV_060327] Length = 1140 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L ++ + + A L Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPHAQWNSNIQELVNRLQNDQV---LETANRLREN 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 567 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721 >gi|284007508|emb|CBA72998.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 389 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 44/346 (12%), Positives = 98/346 (28%), Gaps = 73/346 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 I A ++H + + ++ E LL Q A Y+ A ++ R Sbjct: 83 GEIERAIRIHQSLFESNSLSFEQ--KLLATQQLGRDYFAAGVYDRARNIFLQLVDEQDFR 140 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ ++++ Y +W +AI + Sbjct: 141 FSAL----------------------------------QSLLAIYQATSDWHKAIDVAEK 166 Query: 214 KKKNA-KEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKS 269 K + A +L ++ + + A ++ K SI + Sbjct: 167 LVKMGNPQLKEEIAHFYCELALMELSSDNLDGAFLLLNKAAQANKNGAR---VSIMKGRI 223 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 I++ + KA IL++++ + L+S+ + L N Sbjct: 224 HIARGEYEKAISILKQVFDQD---------RDLVSDTLAMLYECYYHLATWNDWEAYIQQ 274 Query: 330 IV-----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIFLLLAQ--IEQANSHNT 375 V + L + I + A ++ P +F L + A Sbjct: 275 CVAGDCGATAQLYLAEIIEKRKGTEKAQIFIKQQLERHPTMRLFYKLIDYHLADAEEGRA 334 Query: 376 DKILYWTQSAL-HAMPD-PLWIS-DDGYLSSVWLPLSPISKTLCYF 418 + L ++ + + P + G+ + P ++ Sbjct: 335 KESLELLRNMVGEQIRSKPDYRCRKCGFTTHSLYWYCPSCRSWDTI 380 >gi|218462864|ref|ZP_03502955.1| TPR repeat-containing protein [Rhizobium etli Kim 5] Length = 848 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 10/200 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D+N A +A++++P ++ A + K A E + Sbjct: 11 AVYESDINGALADLNRAIELAPGGSSTLNSLGLLQSSR----DANGEAEKAFKKAIELDP 66 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L ++ D+ M + + ++ L + +A + + + ++ KA L Sbjct: 67 QDPLLHANLAILYLDQARMKEAKREIDTAIALDPSFDIALLARGRYYLQTGERDKALQDL 126 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESVESLVIVSKIALEMGS 340 NP + + ++ L + ++K ++ + A+++ Sbjct: 127 LAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLDKNDP--VISAFRTAVDIDD 184 Query: 341 IDQAHAKAMLAMKIAPRKEI 360 D A A + R Sbjct: 185 YD-ADGAIRNAQEYLRRSRA 203 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 16/170 (9%) Query: 228 LLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L AR+ A + D+ + D +++L S++ +AE +K Sbjct: 2 ALSARASYKAVYESDINGALADLNRAIELAPGGSSTLNSLGLLQSSRDANGEAEKAFKKA 61 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALR----LEEINKESVESLVIVSKIALE 337 +++P H +A +Y ++K A R ++ +L+ + L+ Sbjct: 62 IELDPQDPLLHANLAILYLD------QARMKEAKREIDTAIALDPSFDIALLARGRYYLQ 115 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 G D+A + A P L+ + +A Sbjct: 116 TGERDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADR 165 >gi|77919353|ref|YP_357168.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380] gi|77545436|gb|ABA88998.1| Flp pilus assembly protein TadD [Pelobacter carbinolicus DSM 2380] Length = 321 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 77/241 (31%), Gaps = 52/241 (21%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G + + N+ LAR S Q+ L + Q+ A E +L+ Sbjct: 72 KGNVYLNQGNLELARLHFSAALQKQPEFLPPLAGM--GQVFFKRGNTARAREIFNTVLEK 129 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-------------------- 189 A+ L + GD +A+ + + P+ P Sbjct: 130 DPQNMVAMLGLARLARSRGDYATAETLLERLYALHPENPLIMSELAITYDSIGQDRLIKA 189 Query: 190 --VTEAVVQQY--------------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + + V++ +L +S A+ F ++ R + L A Sbjct: 190 EPLHKQVLELQPDIPAGYNNLGFNYLLQGLYSEAVPFFSKALAIDPADVRAKNNLATAFL 249 Query: 234 LENADKGDMIASYHDAIESLKLCDNSI--MASI-CAAKSLISQNKKRKAEVILEKIWKVN 290 L N + I +L+L ++++ A+ ++Q KAE K ++N Sbjct: 250 LNNEE-----------IRALQLFEDTLGKPAAYNNIGYLYMTQGNWDKAERSFRKALELN 298 Query: 291 P 291 P Sbjct: 299 P 299 >gi|225023387|ref|ZP_03712579.1| hypothetical protein EIKCOROL_00245 [Eikenella corrodens ATCC 23834] gi|224943865|gb|EEG25074.1| hypothetical protein EIKCOROL_00245 [Eikenella corrodens ATCC 23834] Length = 406 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 114/381 (29%), Gaps = 27/381 (7%) Query: 5 IRYFFVISLVICSFIIVSHYPED---VSITWGNRLYRTSPFVILSILYFFLFAWILLFAV 61 + + V+ IV+ + + I + + + F+ LL + Sbjct: 4 LIWIIVLFAAAVGLTIVAQHYSGNVYIVIDQTQTQIAVNLHLFAGAMIVFVVLLYLLLRL 63 Query: 62 SRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY 120 ++ P + R AL ++ A + + V + HN Sbjct: 64 INGIINIPGRMRRFGRSRQAHHAETALNKAGLAYFEGKFQHAEQEAAKVLENKEAGHNRT 123 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRYAT 178 L +L V A L+ + Q+P + L + D +A+ Sbjct: 124 LALMLAVHSADQMGDDAKREGYLKEIAQLPH-KAQLSRHLLEAESALNRQDYPAAEAALA 182 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A I+P +Q + ++ + + L++ K K N A R + Sbjct: 183 AAAAINPKL--TRLVRLQLRYMFEQ-NNPLEVLDRVAKLEKASALNAAEAAQYREWAWRE 239 Query: 239 KGDMIASYHDAIESLKLCDNSIM--------ASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + +LK C I + A K L + + ++ + + Sbjct: 240 ----LLALATDYPALKACLGRIPKEMQEGELCAPIAEKML-QIGQYPRVVKWVKTHYPKH 294 Query: 291 PH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + P + +L + + L+ + ++A +A Sbjct: 295 RNAQLLPPMIEAARYLSPREQQKIMDTVEGWLNDAPQDAALLLHLGQMAYAKQLWGKAQG 354 Query: 347 KAMLAMKIAPRKEIFLLLAQI 367 +++ + L+LA++ Sbjct: 355 YLEASLQAQATPQARLVLAKV 375 >gi|153207791|ref|ZP_01946391.1| tetratricopeptide repeat ptrotein [Coxiella burnetii 'MSU Goat Q177'] gi|120576343|gb|EAX32967.1| tetratricopeptide repeat ptrotein [Coxiella burnetii 'MSU Goat Q177'] Length = 388 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + R G L+ A+R + +++ + Sbjct: 84 GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ Y K+W +AI + + + A + + D G + Sbjct: 144 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAQQMIDTGRTSQAVQCL 203 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + N + AS+ + R+A +++ + +P Sbjct: 204 KRAQAIDSNCVRASLIQGRLESENTHYREAIRCYKRVVEQDP 245 >gi|118578955|ref|YP_900205.1| hypothetical protein Ppro_0516 [Pelobacter propionicus DSM 2379] gi|118501665|gb|ABK98147.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 673 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 4/185 (2%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 Y + + L +I +++ ++A + + +L+ A + Sbjct: 396 EQYSEFLKLKPDSPDIQLKLARILAKKKETSLAIDAYDAVLKSAPDNPEANREIAALYKA 455 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G + A + KAL++ D A+V YV +++ L K A E A Sbjct: 456 KGMNDRAVAHYRKALELRKDDADTRSALVSLYVKNRQYDEITELL----KGAVELFPEDA 511 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + K + ++ ++ +L + A + + ++ +A LE Sbjct: 512 NNHYKLGLIHEFKKEYGSAIACYQKAAELRPDHARALNALGRMYMKTDRISEAREALEAA 571 Query: 287 WKVNP 291 K +P Sbjct: 572 RKADP 576 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 83/231 (35%), Gaps = 15/231 (6%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A + + P + + L G A ++ L + PD+P + Sbjct: 355 NNLDEAVVAYKQAIRVKPDNADARLR-LADIRYERGFYQEAVEQYSEFLKLKPDSPDIQL 413 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + KE S AI + K+A + NR I + ++ D+ +A Y A+E Sbjct: 414 KLARILAKKKETSLAIDAYDAVLKSAPDNPEANREIAALYKAKGMNDRA--VAHYRKALE 471 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 K ++ A + + + + +L+ ++ P H ++ I+ Sbjct: 472 LRKDDADTRSALV---SLYVKNRQYDEITELLKGAVELFPEDANNHYKLGLIHEFKKEYG 528 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + + E+ + +L + ++ ++ I +A A K P Sbjct: 529 SA--IACYQKAAELRPDHARALNALGRMYMKTDRISEAREALEAARKADPT 577 >gi|229069171|ref|ZP_04202462.1| hypothetical protein bcere0025_13770 [Bacillus cereus F65185] gi|229109074|ref|ZP_04238674.1| hypothetical protein bcere0018_13460 [Bacillus cereus Rock1-15] gi|229149816|ref|ZP_04278045.1| hypothetical protein bcere0011_13740 [Bacillus cereus m1550] gi|229189700|ref|ZP_04316714.1| hypothetical protein bcere0002_13770 [Bacillus cereus ATCC 10876] gi|228593749|gb|EEK51554.1| hypothetical protein bcere0002_13770 [Bacillus cereus ATCC 10876] gi|228633680|gb|EEK90280.1| hypothetical protein bcere0011_13740 [Bacillus cereus m1550] gi|228674352|gb|EEL29596.1| hypothetical protein bcere0018_13460 [Bacillus cereus Rock1-15] gi|228713923|gb|EEL65807.1| hypothetical protein bcere0025_13770 [Bacillus cereus F65185] Length = 434 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|157154865|ref|YP_001465000.1| cellulose synthase subunit BcsC [Escherichia coli E24377A] gi|157076895|gb|ABV16603.1| cellulose synthase operon protein C [Escherichia coli E24377A] Length = 1140 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 513 EQVYAYGLYLSGHDHDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721 Score = 36.8 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398 >gi|317407004|gb|EFV87038.1| hypothetical protein HMPREF0005_05860 [Achromobacter xylosoxidans C54] Length = 355 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 99/346 (28%), Gaps = 34/346 (9%) Query: 24 YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 + +V + S + + ++ + + + L+ P + KR + Sbjct: 24 HSGNVLLLVWPWRISMSLTLAVLLIVAAFVVLYVGLRLLAWLLAIPDRVRAWRGKRAQAR 83 Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL---EVQIALAERQYNIAH 140 ++ L G + + A K L LL +VQ + A Sbjct: 84 DHELLERGWIGLLEGRYSHAEK--------------DLTRLLDQTKVQTRRVLAALSAAR 129 Query: 141 EKLEMMLQIPATREFAVY--------SLYFE-SCRIGDLNSAQRYATKALD-ISP----- 185 + R AV L + D+ Q A +AL ++P Sbjct: 130 AAHGLGEFDRRDRLLAVAQEHAGAEPGLVEATATVSADMLLDQGRAERALAVLAPLADGG 189 Query: 186 -DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 +++ + + T + L+ A G Sbjct: 190 ARHLHTMRLLLRAHTALHHDEQVFTLARGLLRRNALARSEGDQLIDAAGAARLRAGAAND 249 Query: 245 SYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 ++ + LK + + ++ A + + + +A +LE V +P + Y Sbjct: 250 AWRAIWKDLKAEERLLPEIALAGASAFEAAGEANEAAKVLEAAIAVKFNPALVAAYARCD 309 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + +L +A + + L + + L QA + Sbjct: 310 AGQVSRRLAKAETWLQQRPTDPDLLTALGMLCLNGQLWGQAERYLL 355 >gi|228964593|ref|ZP_04125702.1| hypothetical protein bthur0004_14380 [Bacillus thuringiensis serovar sotto str. T04001] gi|228795127|gb|EEM42624.1| hypothetical protein bthur0004_14380 [Bacillus thuringiensis serovar sotto str. T04001] Length = 434 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIV----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEDLIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|254038709|ref|ZP_04872765.1| cellulose synthase subunit [Escherichia sp. 1_1_43] gi|226839215|gb|EEH71238.1| cellulose synthase subunit [Escherichia sp. 1_1_43] gi|309703936|emb|CBJ03277.1| cellulose synthase operon protein C (TPR-repeat-containing protein) [Escherichia coli ETEC H10407] Length = 1157 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 43.4 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|195175533|ref|XP_002028500.1| GL13214 [Drosophila persimilis] gi|194103718|gb|EDW25761.1| GL13214 [Drosophila persimilis] Length = 881 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + N A L + Sbjct: 131 RRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKR 186 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ + A A L Q K ++A + ++ ++ P A+ Sbjct: 187 EQGFIEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FAD 244 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 245 AYSNMGNTLKELQDVSGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 304 Query: 353 KIAPR 357 K+ P Sbjct: 305 KLKPD 309 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + + H + L L I + A L++ A Sbjct: 155 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 212 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I P + ++ S A+ + + Sbjct: 213 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 272 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 273 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 321 >gi|159900735|ref|YP_001546982.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893774|gb|ABX06854.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1757 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 27/179 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A E E +L+ L R G+L +A R +A +I PD P + V Sbjct: 55 DLAKAVEAFERVLRSDPENIPVHVGLGVTYERQGNLAAAIREFEQAFEIKPDLPELRSQV 114 Query: 195 VQQYVLA----------------------KEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 ++ Y A + + +AI N + + R + +A Sbjct: 115 LRLYTEAWGSENARILLKKAGLGRMYVRGRRFDKAIQEFNDVLAD--DPKRVDIAVALAE 172 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L G + A + L+ + + A++ L++ K + + +++P Sbjct: 173 AL--WRNGQEAEAAEVASDILRDYPDMLKANLILGYHLLAAGDP-KGRKLWQHAQQLDP 228 >gi|144898330|emb|CAM75194.1| methyltransferase [Magnetospirillum gryphiswaldense MSR-1] Length = 543 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 81/274 (29%), Gaps = 13/274 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+++ A + + ++L + + A +L I Sbjct: 50 GLLALDQGQGKRAA--GHLATAIAITPGQSALHLAMGRALEMGNEVAEASLHFRTVLNIH 107 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A L + G ++ A + A+ P + + A Sbjct: 108 PHHAEAHARLGHLLRQQGRVDEAISHCRHAVTADPGHAEAWNTLGALLQQQGDPREAAQC 167 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + + W A+ +L+ + G++ + ++ + + A L Sbjct: 168 LRRALQLRPVWPT--ALNNFGLALK--ECGNLAEAAAILEGAVDIRPDHAGTRTNLASVL 223 Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + + +A EK K+ P E+ I E+ R I + + Sbjct: 224 RAMGQLDRAREQAEKAVKLAPRDSDSWVELGLIRQAQGHEDGAA--SAFDRATAIAPDQI 281 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + +++ +G D+A + + P Sbjct: 282 KPWFCLAESCRAIGQTDRAAQAYRHCLTLDPDDS 315 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 89/277 (32%), Gaps = 11/277 (3%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 E A + + A +++ + A Y L + G A + A+ I+P Sbjct: 15 EAMRAYEDGKPADARRLARQLVESAPSFGGAHYLLGLLALDQGQGKRAAGHLATAIAITP 74 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + A L+ + + A + L +G + + Sbjct: 75 GQS-ALHLAMGRALEMGN-EVAEASLHFRTVLNIHPHHAEAHARLGHLLRQ--QGRVDEA 130 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304 ++ A L Q R+A L + ++ P P N + L Sbjct: 131 ISHCRHAVTADPGHAEAWNTLGALLQQQGDPREAAQCLRRALQLRPVWPTALNNFGLALK 190 Query: 305 E--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IF 361 E N +I + + ++ + MG +D+A +A A+K+APR + Sbjct: 191 ECGNLAEAAAILEGAVDIRPDHAGTRTNLASVLRAMGQLDRAREQAEKAVKLAPRDSDSW 250 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPDPL--WIS 396 + L I QA H A PD + W Sbjct: 251 VELGLIRQAQGHEDGAASA-FDRATAIAPDQIKPWFC 286 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 11/175 (6%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + ++ + G + A + ++ + A + Q + ++A L Sbjct: 9 TATVFTEAMRAYEDGKPADARRLARQLVESAPSFGGAHYLLGLLALDQGQGKRAAGHLAT 68 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P H +A + + I+ E+ + + + G Sbjct: 69 AIAITPGQSALH--LAMGRALEMGNEVAEASLHFRTVLNIHPHHAEAHARLGHLLRQQGR 126 Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 +D+A + A+ P E + L + Q + + AL P+W Sbjct: 127 VDEAISHCRHAVTADPGHAEAWNTLGALLQQQGDPREAAQC-LRRALQ--LRPVW 178 >gi|77462323|ref|YP_351827.1| TPR domain-containing protein [Rhodobacter sphaeroides 2.4.1] gi|77386741|gb|ABA77926.1| TPR domain protein [Rhodobacter sphaeroides 2.4.1] Length = 425 Score = 51.1 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 7/238 (2%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L + + + + H + LL QI + Q+ +A E + Sbjct: 121 LAGALSGEVDDGSTLLYARTATHLRPDHTEALLLSAQILDNQGQHQLASETYARIPTADP 180 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A G + ++ P+ V A+ + ++ A+ Sbjct: 181 MFFVAEIGRADALRADGKIEASLEVLQGLARSKPELMQVHLALGDALRREERYADAVKAY 240 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + R L +R + + + D +L+L + S + Sbjct: 241 DAAIARVPAPERQHWPLFYSRGICHERLSHWKEAEADFRRALELNPDEPQVLNYLGYSFV 300 Query: 272 SQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTVGKLKRALRLEEINK 322 + +A ++E+ P +A Y L ++ V +++A LE ++ Sbjct: 301 DRGQNLEEALSMIERAVAARPESGYIIDSLAWAYFRLGRYQDAVEPMEKASLLEPVDP 358 >gi|327271921|ref|XP_003220735.1| PREDICTED: pre-mRNA-processing factor 6-like [Anolis carolinensis] Length = 988 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 101/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 626 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 683 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 684 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 743 Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + + + + + LK C SI + ++ Sbjct: 744 LCEEALRHYEDFPKLWMMKGQIEEQEELIEKARDAYNQGLKKCPGSIPLWLLLSRLEEKV 803 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIV 331 + +A ILEK NP + +++ + LK + + +E S ++ Sbjct: 804 GQLTRARAILEKSRLKNPKNQ--DLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILW 861 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 862 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 919 Query: 391 D 391 D Sbjct: 920 D 920 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 335 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 391 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 392 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 443 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 444 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 496 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 497 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 542 >gi|209364103|ref|YP_001424877.2| tetratricopeptide repeat protein [Coxiella burnetii Dugway 5J108-111] gi|207082036|gb|ABS76658.2| tetratricopeptide repeat family protein [Coxiella burnetii Dugway 5J108-111] Length = 389 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 59/162 (36%), Gaps = 4/162 (2%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + R G L+ A+R + +++ + Sbjct: 85 GEVDRAIRVHQNLIARPQLAKEHRFHALSELGQDYLRAGVLDRAERLFLELVEMGEENQG 144 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ Y K+W +AI + + + A + + D G + Sbjct: 145 SLRFLLHIYQQEKDWQKAIETAQKLLACGEPVHAIIAQYHCELAEQMIDTGRTSQAVQCL 204 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + N + AS+ + R+A +++ + +P Sbjct: 205 KRAQAIDSNCVRASLIQGRLESENAHYREAIRCYKRVVEQDP 246 >gi|195122698|ref|XP_002005848.1| GI18858 [Drosophila mojavensis] gi|193910916|gb|EDW09783.1| GI18858 [Drosophila mojavensis] Length = 1052 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 263 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 322 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + N A L + ++G + + +++L++ Sbjct: 323 ALKEKGQVKDAEECYNTALR----LCSNHADSLNNLANIKREQGFIEEATRLYLKALEVF 378 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 + A A L Q K ++A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 379 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 436 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 437 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 482 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 96/306 (31%), Gaps = 37/306 (12%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQH-TFHNEY---- 120 L + GY L L++ AR M S V Sbjct: 128 EALDNYRRAVRLKPDFIDGYINLAAALVA--------ARDMESAVQAYITALQYNPDLYC 179 Query: 121 ----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L LL+ + A ++ A +L G++ A + Sbjct: 180 VRSDLGNLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHH 234 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 KA+ + P+ + A+ + RA+ + + N A++ + Sbjct: 235 FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVY 290 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEI 295 ++G + + +++L N A A +L + + + AE ++ + H + Sbjct: 291 YEQGLIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKDAEECYNTALRLCSNHADS 350 Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 N ++ E +L LE + + ++ + + G + +A A Sbjct: 351 LNNLANIKREQGFIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEA 408 Query: 352 MKIAPR 357 ++I P Sbjct: 409 IRIQPT 414 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + + H + L L I + A L++ A Sbjct: 328 GQVKDAEECYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 385 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I P + ++ S A+ + + Sbjct: 386 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 445 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 446 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 494 >gi|124515962|gb|EAY57471.1| probable TPR-domain containing protein [Leptospirillum rubarum] Length = 1076 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 53/384 (13%), Positives = 108/384 (28%), Gaps = 95/384 (24%) Query: 96 AAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 A + LA K S L + + Q A +L +L+ P Sbjct: 581 ALGEVLLAEKQRDAANKAFHSALIFNPENPAAILEVSKSEILSGQGQEALSRLSALLKSP 640 Query: 151 ATREFA-----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 T+E ++ L E + GD A++ A + P P ++ + W Sbjct: 641 LTKERKAEVEWLWGLANE--QAGDPAKAKKALVLATSLDPGNPGYHASLGDFWADHSRWE 698 Query: 206 RAITF--------------------LNQKKKNAKEWNRNRAILLIAR------------- 232 A L+ + + R R ++ +A Sbjct: 699 DARNEYRKSLALQPDNPVLELKKTWLSVQSSRKPDPARIRKVIALAETYRATHPSDISAT 758 Query: 233 ---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + L ++ A + A L+SQ K +A+ + I + Sbjct: 759 MLEAQGELLLNKPEKALPLFDAILSSHPDNTGARLGKAGILLSQGKTEEAKNLGTTI--L 816 Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKE-------------------SV 325 HP+ + + + + R +L + + + Sbjct: 817 ADHPDNLAANLLMARIDQKNNDFTDEADRLEKLHQKHPDWIQPSLTLVAVDLKLKRFREA 876 Query: 326 ES---------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL--AQI 367 ES + ++ L+M A K + ++L++ A + Sbjct: 877 ESIADSILSVKPGLYNARFLKAQAELDMADYRGALRNLSALAKANKKPAPLYLIMSVAAM 936 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 ++ ++ A HA PD Sbjct: 937 KEGDTQEEKHA---LDKAFHAAPD 957 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 87/262 (33%), Gaps = 13/262 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 LAE + N A + + +L+I Y L + G + + +A + P Sbjct: 46 YLAEGKLNEAVIEFQNLLKINPKSAIGHYDLGQAYHKKGWIIESVIQDREATKLDPLMLP 105 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+ + + + +W+ A + K + L + + G + D Sbjct: 106 AHIALAEYAINSGQWNPAKDEIAAILK--IDPRNAEGYALAGQRMLGL--GREKEADQDL 161 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------L 303 +L + A + Q + ++A E+ + N P + T L Sbjct: 162 KHALSIKPGYARALVALGDLKRKQGQPKEARSYYEQALQAN--PSLGRALTGLGMLAQSE 219 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + + + + + +++ ++ S ++ + G + +A + I + Sbjct: 220 NNSVLAR-EEFRKSLKVDPYNLRSRIVYANFLASGGHLHKAISALEAIPAKKSDVRIPVK 278 Query: 364 LAQIEQANSHNTDKILYWTQSA 385 +A+ E N I A Sbjct: 279 IAEYETLLGENQKAINLLLPLA 300 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 52/349 (14%), Positives = 101/349 (28%), Gaps = 79/349 (22%) Query: 109 YVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 ++ + + L I L E + + A + +L AV SL + Sbjct: 495 AAARGYLKDHPENTNVRLFLANIYLREGKLSEAKGTYKTILAADPKNLPAVLSLASIAMT 554 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE------ 220 + A+ +AL +SPD + A+ + + K+ A + E Sbjct: 555 QKNYTEAESNFRRALTLSPDNSGLYSALGEVLLAEKQRDAANKAFHSALIFNPENPAAIL 614 Query: 221 ---------------------------WNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A + L N GD + + + Sbjct: 615 EVSKSEILSGQGQEALSRLSALLKSPLTKERKAEVEWLWGLANEQAGDPAKAKKALVLAT 674 Query: 254 KLCDNSIMASICAAKSLI-------SQNKKRKAEVI--------LEKIW-------KVNP 291 L + ++N+ RK+ + L+K W K +P Sbjct: 675 SLDPGNPGYHASLGDFWADHSRWEDARNEYRKSLALQPDNPVLELKKTWLSVQSSRKPDP 734 Query: 292 ----------------HP-EIANIYTHLLSE----NTVGKLKRALRLEEINKESVESLVI 330 HP +I+ E L + + ++ + + Sbjct: 735 ARIRKVIALAETYRATHPSDISATMLEAQGELLLNKPEKALPLFDAILSSHPDNTGARLG 794 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKI 378 + I L G ++A + P LL+A+I+Q N+ TD+ Sbjct: 795 KAGILLSQGKTEEAKNLGTTILADHPDNLAANLLMARIDQKNNDFTDEA 843 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 96/278 (34%), Gaps = 41/278 (14%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE--SCRIGDLNSAQRY 176 ++ + +I L E + A L+ + +P Y L + + + A Sbjct: 340 PPIIKIGAARIELFEGKPQEASTILQSLAPVPD--LPPTYPLTQSQVALALKRPDQAVSI 397 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILL--IA 231 T AL P + ++ + AK+W A+T +N+ + E + + LL + Sbjct: 398 LTHALSRYPGNIDLQLSLADARMSAKQWKPALTIINEVLSDHPENIPAIQRKGFLLGKTS 457 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI---MA-SICAAKSLISQNKKRKAEVILEKIW 287 + A+ ++E L L ++ AA+ + Sbjct: 458 GASAQIGFLQREAASVPSVEPLYLQSLLANKRPGKALAAARGYLKD-------------- 503 Query: 288 KVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 HPE +ANIY L + + +++ +++ ++ IA+ + Sbjct: 504 ----HPENTNVRLFLANIY--LREGKLSEAKGTYKTILAADPKNLPAVLSLASIAMTQKN 557 Query: 341 IDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDK 377 +A + A+ ++P ++ L ++ A Sbjct: 558 YTEAESNFRRALTLSPDNSGLYSALGEVLLAEKQRDAA 595 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 60/200 (30%), Gaps = 14/200 (7%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFH-NEYL--VYLLEVQIALAERQYNIAHEKLEMMLQ 148 L+++ ++ L R + L L+ Q L Y A L + + Sbjct: 863 LVAV---DLKLKRFREAESIADSILSVKPGLYNARFLKAQAELDMADYRGALRNLSALAK 919 Query: 149 IPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWV-TEAVVQQYVLAKEWSR 206 + +Y + + + GD + KA +PD P V +++ Sbjct: 920 ANK-KPAPLYLIMSVAAMKEGDTQEEKHALDKAFHAAPDDPMVLNNMAFFLASHTTHYAK 978 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ + + K + + + + + A + + Sbjct: 979 ALEYAKKAASIDKHPYIQDTVGYVLFRMGRFSQAQSY--FESAWNAHFRDPEFL---YHM 1033 Query: 267 AKSLISQNKKRKAEVILEKI 286 + + +KA IL++ Sbjct: 1034 GMNEWKIGQPQKARTILKRA 1053 >gi|113868873|ref|YP_727362.1| uncharacterized enzyme of heme biosynthesis [Ralstonia eutropha H16] gi|113527649|emb|CAJ93994.1| uncharacterized enzyme of heme biosynthesis [Ralstonia eutropha H16] Length = 396 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 52/390 (13%), Positives = 127/390 (32%), Gaps = 19/390 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +RL+ + V+ + + + +V + + S + L++L F + + Sbjct: 1 MRLLFWVAVLFGGAVGLALFTQFNHSNVVLFYPPYRVELSLNLALALLLLLFFVVWTVMS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P + K AL + ++ A AR + Q Sbjct: 61 TVRHLADMPRRAAAYRERSRMSKAQAALRESIENLFA--GRFARAERAAREAQSWDDQAQ 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ + A ++ + + P + + S+ D + A + Sbjct: 119 TAALIGARAAHRMQETER-RDAWMAQVTDPEREQARLVSMAELLVDARDADGALETIAQL 177 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLEN 236 V ++ + K W+ A + + + R + + + A E Sbjct: 178 QSQGARQIHVQRIALRAHQHLKNWTEVLRLARSLEKRNALHPVLALRLKQMAVEAMLEER 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D + + ++ + + I + AA+ + ++ +A I+E KVN + Sbjct: 238 RHDADALTEFWRSLSADERRATRI--AEPAARYFAALGRQNEARRIIEDALKVNWDSRLV 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + + ++++A + + + + + L +A + A+K A Sbjct: 296 LRYADCAVPGHALPQIQQAEKWLAAHPADADLYYTLGVLCLGEKLWGKAQSSFERALKYA 355 Query: 356 P-------RKEIFLLLAQI-EQANSHNTDK 377 R L LA++ E+ + + Sbjct: 356 EPDQQRRLRVRTHLALARLFEETERFDDAQ 385 >gi|115532690|ref|NP_001040860.1| O-Linked GlcNAc Transferase family member (ogt-1) [Caenorhabditis elegans] gi|33112401|sp|O18158|OGT1_CAEEL RecName: Full=UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; AltName: Full=O-GlcNAc; AltName: Full=OGT gi|20198852|gb|AAA62535.2| O-linked glcnac transferase protein 1, isoform a [Caenorhabditis elegans] Length = 1151 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ + N +V+ + + ++A + + + + A +L Sbjct: 347 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANA 406 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A++ KAL++ P + + A + + E+ Sbjct: 407 LKEKGSVVEAEQMYMKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 464 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + E++++ A +L A Sbjct: 465 --AAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACY 522 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I+ N ++ ++ + ++ ++ Sbjct: 523 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYSTALKLKPDFPDAYCNLA 574 >gi|312972198|ref|ZP_07786372.1| cellulose synthase operon protein C [Escherichia coli 1827-70] gi|310334575|gb|EFQ00780.1| cellulose synthase operon protein C [Escherichia coli 1827-70] gi|323934688|gb|EGB31078.1| cellulose synthase operon protein C [Escherichia coli E1520] Length = 1140 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 675 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721 Score = 36.8 bits (84), Expect = 8.8, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398 >gi|242023889|ref|XP_002432363.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, putative [Pediculus humanus corporis] gi|212517786|gb|EEB19625.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, putative [Pediculus humanus corporis] Length = 1041 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 102/300 (34%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ A ++ A + + Q L Sbjct: 113 EALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRSDLG 170 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + + A ++ + A +L G++ A + KA+ Sbjct: 171 NLLKA-----LGRLDEAKACYLKAIETYSDFAVAWSNLGCVFNATGEIWLAIHHFEKAVA 225 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 226 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 281 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + +++L N A A +L + + +AE ++ P H + N + Sbjct: 282 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVPEAEDCYNTALRLCPTHADSLNNLAN 341 Query: 302 LLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E G ++ A RL E + ++ + + G + A A++I P Sbjct: 342 IKRE--QGYVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPT 399 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 +P A ++ + H + L L I + A + + P A Sbjct: 313 GQVPEAEDCYNTALRLCPTHADSLNNL--ANIKREQGYVEEATRLYLKALEVFPEF-AAA 369 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I P + ++ A+ + + Sbjct: 370 HSNLASVLQQQGKLTDALLHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 429 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G+ + +LKL + A A L Sbjct: 430 INPGF----ADAHSNLASIHKDSGNTTEAIQSYRTALKLKPDFPDAYCNLAHCL 479 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 80/226 (35%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 248 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 307 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + A L + ++G + + +++L++ Sbjct: 308 ALKEKGQVPEAEDCYNTALRLCPT----HADSLNNLANIKREQGYVEEATRLYLKALEVF 363 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 364 PEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQPT--FADAYSNMGNTLKEMQDIQGAL 421 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+ +A A+K+ P Sbjct: 422 QCYTRAIQINPGFADAHSNLASIHKDSGNTTEAIQSYRTALKLKPD 467 >gi|158522636|ref|YP_001530506.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511462|gb|ABW68429.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] Length = 587 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 21/274 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSI-----LYFFLFAW 55 + +++ F +I++V + I + + WG L +PF+ + + L Sbjct: 309 LWQIMGAFTIITVVTLAVIRFRKKAPYLLVGWGWFLIGLAPFLPVCVGQHRFLLQRYAYL 368 Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115 +L V C A++ + R ++++ +H + + Sbjct: 369 PVLGLVLGIVWGCAALMRRLGLSRCIRAVAAVAVVAMLTVISH-----AQTRHWADSLSF 423 Query: 116 FHNEYLVYLLEVQI-------ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 F + V Q + A +LE L + A Y L G Sbjct: 424 FRHAVEVRPACSQTRANYGEVLFLHGRNAEAIGQLEAALAVDPNNALAHYHLGRAMESAG 483 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + +A R+ KA+ + PD ++ AI L Sbjct: 484 NSEAAMRHFEKAVYLQPDHVPARNSLGNLLCDTGRIDEAIVHYQNALAADPSAFMVYNNL 543 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A +L KGD A+ ++L + A Sbjct: 544 ATALTL----KGDYEAAGDMLKKALAIHPGYATA 573 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 4/118 (3%) Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + A+++ P + L + AI L A + N A + R+ Sbjct: 421 LSFFRHAVEVRPACSQTRANYGEVLFLHGRNAEAIGQLEAAL--AVDPNNALAHYHLGRA 478 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +E+A G+ A+ +++ L + + A L + +A V + +P Sbjct: 479 MESA--GNSEAAMRHFEKAVYLQPDHVPARNSLGNLLCDTGRIDEAIVHYQNALAADP 534 >gi|209523074|ref|ZP_03271631.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209496661|gb|EDZ96959.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 891 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 74/263 (28%), Gaps = 30/263 (11%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIG 168 + E + + L E +++ A + ++Q A L + Sbjct: 2 ERDFQLPGELVSLHQQAIAYLEEGKFDEAIANCQQVIQQQPEWVMAYKTLGLALQKSNR- 60 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L +A+ KA+++ P+ + Y + W A L Q + L Sbjct: 61 -LEAAENAYKKAINLDPNLVAAYGNLGSLYAQQERWEEAEVTLKQAISIDPNFRG----L 115 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK---------SLISQNKKRKA 279 + G + + LKL +I + +L K +A Sbjct: 116 YRNLARVLTKIGRPEEAQSYWQKGLKLD------AILKQRGQEELQIGNTLAESGKWSEA 169 Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +K + HP++ + L + + I + S + + Sbjct: 170 VSAFQKA--IAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHHHLGEA 227 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 + A A+ I P Sbjct: 228 FQVLNKPALAVEAFRKAIAINPD 250 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 71/234 (30%), Gaps = 53/234 (22%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +++ A + + A + L ++ A KA+ I PD W Sbjct: 163 SGKWSEAVSAFQKAIAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHH 222 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKGDMI 243 + A LN+ + + + AI L + + D+ Sbjct: 223 HL----------GEAFQVLNKPALAVEAFRKAIAINPDFCWSYYQLAKAATQLQQWEDVA 272 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 +Y AI+ L + + + +K+L + W+ ++ +Y +L Sbjct: 273 DAYQKAIQ---LKSDFLEFYLGLSKALFELKR-----------WQ-----DLVKLYPSIL 313 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 S+ + +++ +++ + D A ++ P Sbjct: 314 SQ---------------QPDFIKNYYSLAETLVAQECWDAAFVIYEAIIEQNPS 352 >gi|145629275|ref|ZP_01785074.1| hypothetical protein CGSHi22121_10745 [Haemophilus influenzae 22.1-21] gi|145633317|ref|ZP_01789048.1| hypothetical protein CGSHi3655_03771 [Haemophilus influenzae 3655] gi|145636915|ref|ZP_01792580.1| hypothetical protein CGSHiHH_01502 [Haemophilus influenzae PittHH] gi|145639204|ref|ZP_01794811.1| hypothetical protein CGSHiII_04179 [Haemophilus influenzae PittII] gi|319896917|ref|YP_004135112.1| hypothetical protein HIBPF05990 [Haemophilus influenzae F3031] gi|144978778|gb|EDJ88501.1| hypothetical protein CGSHi22121_10745 [Haemophilus influenzae 22.1-21] gi|144986163|gb|EDJ92753.1| hypothetical protein CGSHi3655_03771 [Haemophilus influenzae 3655] gi|145269996|gb|EDK09934.1| hypothetical protein CGSHiHH_01502 [Haemophilus influenzae PittHH] gi|145271766|gb|EDK11676.1| hypothetical protein CGSHiII_04179 [Haemophilus influenzae PittII] gi|309750780|gb|ADO80764.1| Conserved hypothetical protein [Haemophilus influenzae R2866] gi|317432421|emb|CBY80776.1| conserved hypothetical protein [Haemophilus influenzae F3031] Length = 396 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + + K+ E A AK + P IF + QI+ A Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDG 339 >gi|325105573|ref|YP_004275227.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] gi|324974421|gb|ADY53405.1| Tetratricopeptide TPR_1 repeat-containing protein [Pedobacter saltans DSM 12145] Length = 517 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 13/192 (6%) Query: 95 IAAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 A K ++ Y+ Q A Y E + L + Sbjct: 160 ARAGEYRRQGKYEKALADYETLIALRKSSSYYMSAAQCASQVGNYKKTLEYYKEYLTLNP 219 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKEWSRAIT 209 A+ ++ +E +IG A+ Y KA+D+SP P V + ++ + + +A + Sbjct: 220 NSSTALNNVGYELRKIGKFQDAEVYFKKAIDVSPKNVYPLVGQTLLAY--MQGDVDKAFS 277 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AK 268 ++ ++ I +AR +A +GD+IA+ D + L + + A K Sbjct: 278 IIDAAL----LFDTKIKIAALARGSISAQEGDLIAAESDYKQVLS-DPQHVKYAYPALTK 332 Query: 269 SLISQNKKRKAE 280 I + + +A Sbjct: 333 VYIYKGEYARAV 344 >gi|326388364|ref|ZP_08209960.1| hypothetical protein Y88_3247 [Novosphingobium nitrogenifigens DSM 19370] gi|326207096|gb|EGD57917.1| hypothetical protein Y88_3247 [Novosphingobium nitrogenifigens DSM 19370] Length = 1075 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 17/209 (8%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + AR+ + YLL Q A+A + +A L + AV Sbjct: 869 DNDTARREADIDAALKLDGKNAEAYLLRAQGAIATGRLALADTALGE-AEKRKANALAVT 927 Query: 159 SL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT--FLNQKK 215 SL + GD +A + A + + PD V W +A L+ Sbjct: 928 SLRLDLLAKRGDATAALKLANEVVSSHPDDASTRNMVC--------WFKATRNIALDTAL 979 Query: 216 KNAKEWNRNRA---ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + A L +R+ GD + D +L + + + + Sbjct: 980 ADCDAAVKLAANTPSYLDSRAFARLRGGDTKGAITDYSAALHQSPDLVASLYGRGIAYAR 1039 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +A L + P+I ++ Sbjct: 1040 LGDRNRALADLSRARADK--PDIDTVWAD 1066 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 72/229 (31%), Gaps = 12/229 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G A A A+ SPD + + + A+ + + + Sbjct: 804 GRREEALDQADIAIARSPDDRQTRLLRIDVRYQTGDGAGALADADYLLAHKPTA--QDYL 861 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L D D +LKL + A + A+ I+ + A+ L + Sbjct: 862 LHA----HLLPDNDTARREADIDAALKLDGKNAEAYLLRAQGAIATGRLALADTALGEA- 916 Query: 288 KVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESL-VIVSKIALEMGSID 342 + +A L + LK A + + + + ++ A ++D Sbjct: 917 EKRKANALAVTSLRLDLLAKRGDATAALKLANEVVSSHPDDASTRNMVCWFKATRNIALD 976 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A A A+K+A +L + +T + +ALH PD Sbjct: 977 TALADCDAAVKLAANTPSYLDSRAFARLRGGDTKGAITDYSAALHQSPD 1025 >gi|186686063|ref|YP_001869259.1| tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102] gi|186468515|gb|ACC84316.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102] Length = 381 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 4/154 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + Q + A L I T+ A+Y+L L A +A+++ Sbjct: 153 QGQKDAAITAYRQSLVIDPTKVAALYNLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYF 212 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + +AI Q + + A + A +G + ++ Sbjct: 213 NLAIALQQQGQTEQAIATYRQALQ----LDPQNATAYNNMANLLAIQGQASEAISVYRQA 268 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++L + A +L +Q +KA +L++ Sbjct: 269 IRLNPKNASAYYNLGVTLYNQGDIKKANGVLKRA 302 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 69/250 (27%), Gaps = 37/250 (14%) Query: 114 HTFHNEYLVYLLEVQIALAER-------QYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + LE + A LQ + A+ L Sbjct: 59 KLLAETAISQDLEAASFFQQGVTRYNRKDLQGAEYAFRQALQRDPSLGAALNYLGNIFME 118 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----------------- 209 L+ A + T+A+ I+P+ + + AIT Sbjct: 119 QNRLDVALQEYTEAIRINPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAALY 178 Query: 210 -----FLNQKKKNAKEWNRNRAILLIAR--------SLENADKGDMIASYHDAIESLKLC 256 Q++ +AI L + ++ +G + ++L+L Sbjct: 179 NLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQALQLD 238 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A A L Q + +A + + ++NP A + N K Sbjct: 239 PQNATAYNNMANLLAIQGQASEAISVYRQAIRLNPKNASAYYNLGVTLYNQGDIKKANGV 298 Query: 317 LEEINKESVE 326 L+ + E E Sbjct: 299 LKRAHTEYRE 308 >gi|297196365|ref|ZP_06913763.1| tetratricopeptide TPR_2 domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153196|gb|EDY64746.2| tetratricopeptide TPR_2 domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 743 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 9/135 (6%) Query: 170 LNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 A +A ++ P W VV + + A L + + Sbjct: 370 PEEALSCFGRAAELEPRDGLVWANRGVV--LAGLERYEEAEESLARAYQLRP----RDLY 423 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +L++RS +G + A+ D E+L++ I A + A+ L + + +A L+ Sbjct: 424 VLVSRSNFRVRRGQLDAALDDIDEALRVAPRHIPALVNKAQLLNALGRPGEALACLDTAA 483 Query: 288 KVNP-HPEIANIYTH 301 ++ P ++ + Y H Sbjct: 484 EIAPETRQVWSTYVH 498 >gi|195430888|ref|XP_002063480.1| GK21381 [Drosophila willistoni] gi|194159565|gb|EDW74466.1| GK21381 [Drosophila willistoni] Length = 1059 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 83/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 268 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 327 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + N A L + ++G + + +++L++ Sbjct: 328 ALKEKGQVKEAEECYNTALR----LCSNHADSLNNLANIKREQGYIEEATRLYLKALEVF 383 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 + A A L Q K + A ++ ++ P A+ Y+++ + ++ G L Sbjct: 384 PDFAAAHSNLASVLQQQGKLKDALNHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 441 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 442 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 487 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 97/300 (32%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + GY L L++ ++ A + + Q L Sbjct: 133 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMEAAVQAYITALQYNPDLYCVRSDLG 190 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 191 NLLKA-----LGRLEEAKACYLKAIETCPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 245 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 246 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 301 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTH 301 + +++L N A A +L + + ++AE ++ + H + N + Sbjct: 302 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEECYNTALRLCSNHADSLNNLAN 361 Query: 302 LLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E +L LE + + ++ + + G + A A++I P Sbjct: 362 IKREQGYIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKDALNHYKEAIRIQPT 419 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + + H + L L I + A L++ A Sbjct: 333 GQVKEAEECYNTALRLCSNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPDFAAAH 390 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I P + ++ S A+ + + Sbjct: 391 SNLASVLQQQGKLKDALNHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 450 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 451 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 499 >gi|154284670|ref|XP_001543130.1| hypothetical protein HCAG_00176 [Ajellomyces capsulatus NAm1] gi|150406771|gb|EDN02312.1| hypothetical protein HCAG_00176 [Ajellomyces capsulatus NAm1] Length = 430 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%) Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ V+ L A + ML+ + G+ A ++ Sbjct: 81 RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 138 Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225 AL + PD+ + +++ ++++ AI + + + Sbjct: 139 KLALSLDPDSTQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 198 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + LL R+ + + D +LKL + A AK+ + +A +K Sbjct: 199 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 258 Query: 286 IWKVNP 291 I + NP Sbjct: 259 IAEANP 264 >gi|113474031|ref|YP_720092.1| group 1 glycosyl transferase [Trichodesmium erythraeum IMS101] gi|110165079|gb|ABG49619.1| glycosyl transferase, group 1 [Trichodesmium erythraeum IMS101] Length = 3301 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 11/233 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL + A L+I A YSL L A K ++I P+ Sbjct: 1749 ALLPGKLEEAITYYYKALEIDPYLTEAYYSLANIFVNQNQLKKAVIIYKKLIEIQPNIWE 1808 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + +S I+ L K +I + + A G + + + Sbjct: 1809 NYHNLGNILIEQENFSEGISALYYAIKLNPSS----SISYLKLAEILAKSGKLSEAINAY 1864 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304 + + + N A L ++ +K +A + K ++ P H ++ +++ Sbjct: 1865 QKVIFIDPNLAEAYQYLGDILRNKGEKEEAIKVYRKAIEIQPQLWTVHHKLGSLFQETEK 1924 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 R + E+N + S + + + + +A A+++ P Sbjct: 1925 LEAATNAYR--KSIELNPDFCWSYNNLGDVLVRLEKWSEAAGAYGRAIELNPD 1975 >gi|55980598|ref|YP_143895.1| TPR repeat-containing O-linked GlcNAc transferase [Thermus thermophilus HB8] gi|55772011|dbj|BAD70452.1| putative O-linked GlcNAc transferase (TPR repeat) [Thermus thermophilus HB8] Length = 355 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 89/242 (36%), Gaps = 17/242 (7%) Query: 160 LYFESCRI----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 LY ++ G L A A ++P + Y L E +A L Q Sbjct: 110 LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQAL 169 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A+ + S+ D+ +A Y A+E + + A +L+ + K Sbjct: 170 ALEDTPEIRSALAELYLSMGRLDEA--LAQYAKALEQAPKDLDLR---VRYASALLLKGK 224 Query: 276 KRKAEVILEKIWKVNPHPE-----IANIYTHL-LSENTVGKLKRALRLEEINKESVESLV 329 +A +LE+ ++ P + Y L ++ L+ A+ L + + Sbjct: 225 AEEAARVLEEGHRIKPLNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLR--FPAAYY 282 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 + ++ L +G +A ++ +A+++ P++ + + + + Y Q AL Sbjct: 283 YLGQVYLALGDYPKAKSRLTVAVRLEPKRAEYRYSLCLANEKLGDKEGARYQCQEALKLR 342 Query: 390 PD 391 PD Sbjct: 343 PD 344 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 69/206 (33%), Gaps = 9/206 (4%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + +G ++A +AL +P P + + + + A+ Sbjct: 35 LGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTP 94 Query: 220 EW-----NRNRAILLIARSLENADKGD--MIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + A + + R E+ ++G + + ++ ++ + Sbjct: 95 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL 154 Query: 273 QNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ KAE L++ + PEI A +L L + + E + ++ V Sbjct: 155 LGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVR 214 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 + L G ++A +I P Sbjct: 215 YASALLLKGKAEEAARVLEEGHRIKP 240 >gi|148825817|ref|YP_001290570.1| hypothetical protein CGSHiEE_03850 [Haemophilus influenzae PittEE] gi|148715977|gb|ABQ98187.1| hypothetical protein CGSHiEE_03850 [Haemophilus influenzae PittEE] gi|301169964|emb|CBW29568.1| conserved protein [Haemophilus influenzae 10810] gi|309972961|gb|ADO96162.1| Conserved hypothetical protein [Haemophilus influenzae R2846] Length = 396 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + + K+ E A AK + P IF + QI+ A Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEEG 339 >gi|307718008|ref|YP_003873540.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306531733|gb|ADN01267.1| putative TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 482 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 97/337 (28%), Gaps = 53/337 (15%) Query: 40 SPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN 99 + ++L + IL + + LS P +R + + + Sbjct: 29 ALPLLLPAAIVLVGLVILTVYFNLYVLSDPEK----KAERKKRRDRQTI----------- 73 Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATR---- 153 + + + ++ + ++++ A + +++ + T+ Sbjct: 74 ------LKKAQRRLVQNPRDPEALVVLAEAYFEDQEWEKALKLYQVLAEGVTDRTKVDEY 127 Query: 154 -EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + R+G A + A + P+A V + L + A+ L+ Sbjct: 128 EVQVRRGVC--AFRLGRHEEAYQAFAVAYSLKPEAFEVRFHMGALEYLRGAYEHAVKLLS 185 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 E R L SL G + L + A L + Sbjct: 186 AAAAQQPEHPETRRYL----SLALHRSGKYKEALPSIRAILNEMPDDKELLFAYADCLAN 241 Query: 273 QNKKRKAEVI-----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-- 325 +K +A I +++ W + L + + +RA++ EI Sbjct: 242 LGQKEQALSIFTHLRVDEQWGPQ------ACFRAGLINLGLHRYERAIKDLEIGVRHRGM 295 Query: 326 ------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E +++ + I +A + P Sbjct: 296 DNQLRLEMEYRLAQAYIHQKEIRKAVEHLRAVQRTNP 332 >gi|2266992|gb|AAB63465.1| O-linked GlcNAc transferase [Caenorhabditis elegans] Length = 1151 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ + N +V+ + + ++A + + + + A +L Sbjct: 347 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPHFPDAYCNLANA 406 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A++ KAL++ P + + A + + E+ Sbjct: 407 LKEKGSVVEAEQMYMKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 464 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + E++++ A +L A Sbjct: 465 --AAAHSNLASILQQQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACY 522 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I+ N ++ ++ + ++ ++ Sbjct: 523 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYSTALKLKPDFPDAYCNLA 574 >gi|148358954|ref|YP_001250161.1| N- acetylglucosaminyl transferase [Legionella pneumophila str. Corby] gi|296107003|ref|YP_003618703.1| TPR domain protein (heat shock protein) [Legionella pneumophila 2300/99 Alcoy] gi|148280727|gb|ABQ54815.1| TPR domain protein (heat shock protein) N- acetylglucosaminyl transferase [Legionella pneumophila str. Corby] gi|295648904|gb|ADG24751.1| TPR domain protein (heat shock protein) [Legionella pneumophila 2300/99 Alcoy] Length = 389 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 21/204 (10%), Positives = 68/204 (33%), Gaps = 45/204 (22%) Query: 93 MSIAA-----HNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKL 143 +++ + + A ++H + + E L+ L Q ++ ++ A Sbjct: 73 LALGSLFRRRGEVDRAIRIHQNLIARPQLSIQQRKEALMAL--GQDYMSAGVFDRAERIF 130 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +++ G +++ + ++ Y K Sbjct: 131 LEVVE------LG-----------GSRDTS----------------SLQGLLAIYQQEKA 157 Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 W +A+ + + + ++ A + + M + + +++ + S+ A Sbjct: 158 WEKALDIIKKLEISTGASFHNQAAHYYCEMASQALKINAMDRAIYCIKQAMNVDPESVRA 217 Query: 263 SICAAKSLISQNKKRKAEVILEKI 286 S+ A I + + ++A L+++ Sbjct: 218 SLMNATIEIKEGRYKQAIRSLKRV 241 >gi|53719291|ref|YP_108277.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243] gi|52209705|emb|CAH35664.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243] Length = 1454 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 777 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 829 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 830 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 889 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 890 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 949 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 950 LERRDDAIAA--LQRALE 965 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + A +A+ ++PD + + ++ A++ + ++ + + Sbjct: 880 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 939 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ A + + D IA+ A+E A + + + KA + + Sbjct: 940 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 995 Query: 285 KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + V H E+A+ Y +L + + L+RA EI + E+L + + Sbjct: 996 R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1050 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ A+ I + + LA Sbjct: 1051 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1079 >gi|298492452|ref|YP_003722629.1| TPR repeat-containing protein ['Nostoc azollae' 0708] gi|298234370|gb|ADI65506.1| TPR repeat-containing protein ['Nostoc azollae' 0708] Length = 280 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 8/160 (5%) Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A + + P + S GD +A +A+ ++ + Sbjct: 102 AYFDVGNKEGAIADYNQALRLNPNDAETYNNRGNARASL--GDQQNAITDYNEAIRLANN 159 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + A+ Q + + + A+ R A +GD + Sbjct: 160 YAQAYNNRGNARATQGHKNGALADYTQAIRIDQNY----AVAYNNRGNTYASQGDQQKAI 215 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 D ++++L N A + + KR A L++ Sbjct: 216 ADYNQAIRLNPNFAPAFNNRGNAFAATGDKRSALQDLQRA 255 >gi|156384218|ref|XP_001633228.1| predicted protein [Nematostella vectensis] gi|156220295|gb|EDO41165.1| predicted protein [Nematostella vectensis] Length = 556 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 6/163 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 +K + + + +A++L A L+ DK + E++KL ++ A Sbjct: 325 RAVYFAQKAHTIDSHNVQALILKASLLQALDK--YQEALLHFREAVKLSPSNFEAVKGLV 382 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKR---ALRLEEINKE 323 + +S + R A I + K +++ + + K + ++ Sbjct: 383 ECYLSAERFRDAMAIAKNALKTLGTTTRTLTLCASVITHDPSTQEKAKSMLEKALSLDPG 442 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 E++ ++++I D+A + + LL Sbjct: 443 HTEAVCLLAEILGHKQEYDKAIELLKKHLINHRTARLHQLLGD 485 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 5/125 (4%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 ++ A + +A+ +SP + +V+ Y+ A+ + A+ K Sbjct: 350 LLQALDK--YQEALLHFREAVKLSPSNFEAVKGLVECYLSAERFRDAMAIAKNALKTLGT 407 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R + S+ D + ++L L A A+ L + + KA Sbjct: 408 TTRTLTLCA---SVITHDPSTQEKAKSMLEKALSLDPGHTEAVCLLAEILGHKQEYDKAI 464 Query: 281 VILEK 285 +L+K Sbjct: 465 ELLKK 469 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 46/172 (26%), Gaps = 40/172 (23%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGD--------- 169 +L+ + A +Y A +++ + AV L Y + R D Sbjct: 343 ALILKASLLQALDKYQEALLHFREAVKLSPSNFEAVKGLVECYLSAERFRDAMAIAKNAL 402 Query: 170 -----------------------LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 A+ KAL + P + + +E+ + Sbjct: 403 KTLGTTTRTLTLCASVITHDPSTQEKAKSMLEKALSLDPGHTEAVCLLAEILGHKQEYDK 462 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 AI L + N A L A + + +SL L Sbjct: 463 AIELLKKHLI-----NHRTARLHQLLGDFLATTNEYQDALDQYTKSLSLNPG 509 >gi|126451956|ref|YP_001066323.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a] gi|134277247|ref|ZP_01763962.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] gi|126225598|gb|ABN89138.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a] gi|134250897|gb|EBA50976.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] Length = 1454 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 777 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 829 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 830 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 889 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 890 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 949 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 950 LERRDDAIAA--LQRALE 965 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154 H+ LA + Q ++ LL ++AL ++ A + E + + Sbjct: 883 HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 940 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + R D +A + +AL+++ P VQ Y+ +++ +A+ + Sbjct: 941 ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 995 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + N D + +L++ ++ A L + Sbjct: 996 RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 1053 Query: 275 KKRKAEVILEKI 286 + ++E +L + Sbjct: 1054 RLAESEEVLRRA 1065 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A+ Y +A+ + PD ++ A + + A + + + L Sbjct: 820 PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 875 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +AR D + A +++L + A + A+ + +A E+ Sbjct: 876 LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 930 Query: 290 NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P+ Y +L ++ + L+RAL L + ++ + V + L Sbjct: 931 EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 987 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 D+A A + + + N D+ + AL P Sbjct: 988 DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 1036 >gi|194365427|ref|YP_002028037.1| tetratricopeptide repeat-containing protein [Stenotrophomonas maltophilia R551-3] gi|194348231|gb|ACF51354.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 392 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 95/299 (31%), Gaps = 19/299 (6%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ A R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVNRHDLSDAQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ Y ++W +AI + + + + + G + + Sbjct: 148 ALKHLIGIYQAERDWEKAIDNATRFEDVTGEPMGKLIGQFECELAERFRGAGKLEEARAA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306 + + S+ A I + A E+ + +P PE+ + + Sbjct: 208 IARAYQADAMSVRAGIIEGRLETDAGNAEAAVRAFERAARNDPEYLPELLPAL--MANYR 265 Query: 307 TVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 VG L A E + + ++++ E + A A +K P Sbjct: 266 KVGDLGGARAFLSEMTEHYRGIAPVLALTRLMEEQEGVAPARAYLGRQLKDRPSVRGESA 325 Query: 364 LAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTLCY 417 L + A ++ L+ + + +P + G + W P K Sbjct: 326 LIDLTLAEGADSTATLHDLKHITDQLLVRNPAYRCTRCGFGARTHHWQ--CPSCKEWGT 382 >gi|222054003|ref|YP_002536365.1| hypothetical protein [Geobacter sp. FRC-32] gi|221563292|gb|ACM19264.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 627 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 4/188 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + Y + +++ +L ++ ++ + Y A + ++ A L Sbjct: 390 QAIEQYHALLKLKNDDAATHLKLARVYVSSKDYTTAISEYLATTKLEPDNIEAHRELAQL 449 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + A + L + D A+ YV K++ I L K E N Sbjct: 450 YRKKNQNEEAAKEYQAVLKVKKDDNDARTALTSIYVKNKKYDELIGLL----KEGVEQNP 505 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L K D A+ E+ L + A ++ + +A+ L Sbjct: 506 KDPNSHYKLGLMYEFKKDYTAATDHYKEATALKADHAKALNALGRAYMKSGHITEAKEAL 565 Query: 284 EKIWKVNP 291 E K NP Sbjct: 566 EAAKKANP 573 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 92/295 (31%), Gaps = 41/295 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148 G+ +I+ + + Q ++ L + + A E +L Sbjct: 204 GVAAISFGRNEFDKAIDELKKAQSADPGNKEIHRLLAEAYEKKGDRKSAE--YESLLAGV 261 Query: 149 --IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 T Y R GD A + KA+ +A ++ +W Sbjct: 262 QVKSETASLPDY------LRQGDSFMATKEFEKAIA-------EYKAALK---EKPDWPE 305 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ L N + + + GD I Y + + + ++ Sbjct: 306 ALQKLGDACMA---VNNDDDAITYYKEAVRLKAGDDIIHYKLGVLYERQA--LLDEAVVE 360 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +S A L+ +A+IYT + +++ L ++ + Sbjct: 361 YRQYLST-----AADNLDA------RRRLADIYT--QRGSYPQAIEQYHALLKLKNDDAA 407 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 + + ++++ + A ++ + K+ P E LAQ+ + + N + Sbjct: 408 THLKLARVYVSSKDYTTAISEYLATTKLEPDNIEAHRELAQLYRKKNQNEEAAKE 462 >gi|330917583|ref|XP_003297866.1| hypothetical protein PTT_08422 [Pyrenophora teres f. teres 0-1] gi|311329167|gb|EFQ93997.1| hypothetical protein PTT_08422 [Pyrenophora teres f. teres 0-1] Length = 669 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 80/247 (32%), Gaps = 24/247 (9%) Query: 88 LYTGLMSIAAHNI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 L G + N L + +S + + +L +I A+ + + A + Sbjct: 317 LMRGEAHLRMGNANALGEAQNVAMSLLRYNNQDPDALVLRGRILYAQGENDKAVQHFRQA 376 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L D +A +Y + A A + Sbjct: 377 LNCDP-----------------DFKTAVKYLRMVQKLDRLKSEGNAAF-----KAGRYQE 414 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 AI +Q + +L R+L ++ + + D ++L+L + A Sbjct: 415 AIDTYSQALAVDPSNKSTNSKILQNRALCHSRQRSWKHAIADCEKALELDPSYTKARKTR 474 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 AK+L +A L+ I + NP P IA E K K ++ I K++ Sbjct: 475 AKALGENGNWEEAVRDLKAIAEENPSEPGIAKEIREAEMELKKSKRKDYYKILGIQKDAT 534 Query: 326 ESLVIVS 332 E+ + + Sbjct: 535 ETEIKKA 541 >gi|221135423|ref|ZP_03561726.1| hypothetical protein GHTCC_10883 [Glaciecola sp. HTCC2999] Length = 389 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 79/275 (28%), Gaps = 50/275 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + L + + A +L R Sbjct: 83 GELDRAIRIHQNLVSRDELQGTPRENALSELGRDYMLAGFLERAENSYLKLLDSDKHR-- 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +AQRY + + Y KEW +AI + Sbjct: 141 ---------------AAAQRY-----------------LFEIYQTTKEWDKAIDLSQRML 168 Query: 216 K---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 N K+ + ++ + D + E++ + ++++ + + I Sbjct: 169 SVDSNQKDVAHQLSHFYCEKAQQFVKAADYSNAIPFLHEAIDIDEHAVRPWLMLGRIYIE 228 Query: 273 QNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +KA L ++ W P + L + + L +E Sbjct: 229 SQEYQKAADALNQVPNRDISWFSEAVPLLEQCSEALHDDELLE-----SSLAPYWQECAT 283 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 S + K++ + G +A + +K P F Sbjct: 284 SYLAKVKLSAKRGEDTEATNILLEQLKQKPTMRGF 318 >gi|237812363|ref|YP_002896814.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei MSHR346] gi|237506629|gb|ACQ98947.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei MSHR346] Length = 1451 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 947 LERRDDAIAA--LQRALE 962 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + A +A+ ++PD + + ++ A++ + ++ + + Sbjct: 877 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ A + + D IA+ A+E A + + + KA + + Sbjct: 937 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992 Query: 285 KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + V H E+A+ Y +L + + L+RA EI + E+L + + Sbjct: 993 R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ A+ I + + LA Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076 >gi|167910819|ref|ZP_02497910.1| hypothetical protein Bpse112_10010 [Burkholderia pseudomallei 112] gi|254188884|ref|ZP_04895395.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur 52237] gi|157936563|gb|EDO92233.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur 52237] Length = 1451 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 947 LERRDDAIAA--LQRALE 962 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + A +A+ ++PD + + ++ A++ + ++ + + Sbjct: 877 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ A + + D IA+ A+E A + + + KA + + Sbjct: 937 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992 Query: 285 KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + V H E+A+ Y +L + + L+RA EI + E+L + + Sbjct: 993 R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ A+ I + + LA Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076 >gi|310825510|ref|YP_003957868.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309398582|gb|ADO76041.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 392 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 97/293 (33%), Gaps = 38/293 (12%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E + + P A+ + + + A+ K L + P+ P + + Sbjct: 21 AAAREFQGALAKNPQ-DASALLGMARLHLAQQEADKARPLLEKLLALDPEHPEARGFLAR 79 Query: 197 QYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLI-------ARSLENADKGDMI- 243 ++ A+ L KN + +N A+LL+ A++ A K Sbjct: 80 LKAEGEKDEGALDELRALAKNPEAGFIEFYNLGHALLLLPGKEAEAAQAFVQALKVAPKN 139 Query: 244 --------------ASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILEK 285 A++ K A+K L+ + KA++ L+K Sbjct: 140 PHATTYLGVAVWKQGQLPQALKCFKYAATLAPRESLPLQLASKVLVQLGQVGKAQLALQK 199 Query: 286 IWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + P PE+ + + + LK + +++ ++ + + L G++ Sbjct: 200 ALQRAPQKPELHEDFIKLCIFANKPKLALKSVIDFRQLDPKNPNGPYLQGLVMLLSGNLS 259 Query: 343 QAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392 +A A+ +AP+ L + + L + A+ A +P Sbjct: 260 EARRTFREAVALAPQAWEPKLGLARALLIGEQKEVAEALKLLEEAVALAPTEP 312 >gi|167815662|ref|ZP_02447342.1| hypothetical protein Bpse9_10994 [Burkholderia pseudomallei 91] gi|226197223|ref|ZP_03792800.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] gi|225930602|gb|EEH26612.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] Length = 1451 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 947 LERRDDAIAA--LQRALE 962 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + A +A+ ++PD + + ++ A++ + ++ + + Sbjct: 877 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ A + + D IA+ A+E A + + + KA + + Sbjct: 937 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992 Query: 285 KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + V H E+A+ Y +L + + L+RA EI + E+L + + Sbjct: 993 R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ A+ I + + LA Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076 >gi|167034191|ref|YP_001669422.1| cellulose synthase subunit BcsC [Pseudomonas putida GB-1] gi|166860679|gb|ABY99086.1| cellulose synthase operon C domain protein [Pseudomonas putida GB-1] Length = 1186 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 55/359 (15%), Positives = 115/359 (32%), Gaps = 68/359 (18%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 ++AA+++P AR + QQ L+ L + +AE A + + ++ Sbjct: 361 ALAANDLPTARSRYQQARQQRPNDEFALLGL--ADVLMAEGNTVAAERQFLQVRRMAPDN 418 Query: 154 EFAVYSLYF------------------------------------------ESCRIGDLN 171 AV L E+ + D + Sbjct: 419 GIAVRGLMRVYQAQSPDKAQAFLDSLPARQQTQFASLRRSLALARLRQQGDEALQREDWS 478 Query: 172 SAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 +A + +A ++PD PW+ + ++ E A + Q + + + Sbjct: 479 TASQVLNQAASLAPDEPWLVYQLANSLRHQGRTAEADAAFARVVQHQPHDPATRYAHGLF 538 Query: 229 LIARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L + + + A A + +L+ M ++ +A+ L +Q + A +LE Sbjct: 539 LESSDRDALALDSLGAIPQPAWTPDMHALEQRIQRRM-TLASAQQLQAQGRNADATALLE 597 Query: 285 KIW-KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P+ + + L E + R+ + ++ + V + A+ G+ Sbjct: 598 ASLARGEASPDDLMLLADWAAALGEPGKAR-GYYQRVLAVQPGRADARLGVMESAVAEGN 656 Query: 341 IDQAHAKAM-----LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS--ALHAMPDP 392 + QA LA + + LA + A + A PDP Sbjct: 657 LAQARHMLGVQVPQLAADDSNAQRR---LAAVWVALGEHQQAARQ-LDRVAAQQTRPDP 711 >gi|73670453|ref|YP_306468.1| hypothetical protein Mbar_A2994 [Methanosarcina barkeri str. Fusaro] gi|72397615|gb|AAZ71888.1| hypothetical protein Mbar_A2994 [Methanosarcina barkeri str. Fusaro] Length = 417 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 8/147 (5%) Query: 134 RQYNIAHEKLEMMLQI-PATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 ++ A E + +LQ P E A F + A + AL I P+ Sbjct: 273 GRFEEALEIYDKILQKFPEYAEAWAGKGSIFLALDRE--EEALEAYSSALRIRPEYLEAL 330 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + ++ ++ + + R LL A+ ++ G + + Sbjct: 331 TSTGSLLSRLGRYEESLKIYDKALQLVPKDPR----LLAAKGFVLSEMGKQEEALENCNR 386 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRK 278 +L+L + A + L +++ Sbjct: 387 ALELQPGFVPALEIKVRILSEIGRQKN 413 >gi|21244240|ref|NP_643822.1| cellulose synthase subunit C [Xanthomonas axonopodis pv. citri str. 306] gi|22001534|sp|P58938|BCSC_XANAC RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|21109883|gb|AAM38358.1| cellulose synthase subunit C [Xanthomonas axonopodis pv. citri str. 306] Length = 1508 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 92/309 (29%), Gaps = 45/309 (14%) Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 V R P L + R + + L AA N K + + + Sbjct: 306 VLRARARDPEALGGLGSVRLRQQRFAEAQELLRPAAAGNG----KWRNALESARYWQQ-- 359 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L + + A A A + +E +Q+ +L GD +A+ KA Sbjct: 360 ---LQQAETARARGDLAQARQLIEQAVQLLPNEPAGHVALGDL-QAAGDPVAAEASYRKA 415 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----ARSLEN 236 L D + +V Y A ++ + + +A+L AR+ + Sbjct: 416 LARDADNAGALQGLVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARARQF 475 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 D GD +++ + ++ + A+ + +A +++ Sbjct: 476 LDAGDAVSAQTELEAAMVERPGDAWIRLDLARLYQQAGRPDQARSVMDG----------- 524 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L ++ + E+L + +A E G A+ A Sbjct: 525 --------------------LLAVHGDQPEALHANALLAQESGDWQGAYDSLDRIPAAAR 564 Query: 357 RKEIFLLLA 365 + L A Sbjct: 565 TPAMTQLRA 573 >gi|323966049|gb|EGB61489.1| cellulose synthase operon protein C [Escherichia coli M863] gi|327251176|gb|EGE62869.1| cellulose synthase operon protein C [Escherichia coli STEC_7v] Length = 1157 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 89/255 (34%), Gaps = 14/255 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D ++A+RY + L + Sbjct: 357 QGDAALKANNPDRAERLFQQARSVDNTDSYAVLGLGDVAMARKDYSAAERYYQQTLRMDS 416 Query: 186 DAPWVTEAVVQQYVLAK-EWSRA-ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 + Y E + A I L+ ++ + + + L ++ +G Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALEKQGK 476 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ +A+ ++ + + P+ PE Y Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLVQQKPNDPEQVYAYG 536 Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351 LS + + L L + N E + + V + A + + A + Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAAAML 596 Query: 352 MKIAPRKEIFLLLAQ 366 + P I L LA Sbjct: 597 RQQPPSSRIDLTLAD 611 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 41/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y+ A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARSVDNTDSYAVLGL--GDVAMARKDYSAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALEKQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLVQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +A +L + P P ++ + + + L + +++ Sbjct: 587 GKEAEAAAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPASDNASLNTQRRVALAQAQLGDTAAAQQ 692 >gi|229178026|ref|ZP_04305398.1| hypothetical protein bcere0005_13890 [Bacillus cereus 172560W] gi|228605514|gb|EEK62963.1| hypothetical protein bcere0005_13890 [Bacillus cereus 172560W] Length = 434 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 93/287 (32%), Gaps = 67/287 (23%) Query: 122 VYLLEVQIALAERQYNIAHEKL---EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 LL + + ++A +KL + M+ + F + LY G+ A Y Sbjct: 116 SLLLVADLFQMQGFDDVAEQKLLKAKEMMPDESVITFGLAELYSSK---GEEQKAITYYE 172 Query: 179 KALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKN----------------AKE 220 L V A+ + W AI++ + +E Sbjct: 173 SLLAEHKVMGGVVIALRLAETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEE 232 Query: 221 WNR-------------NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + R A L + + +G + SY E +K+ + S+ + A Sbjct: 233 YQRAIGAWQELKELDPEYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELA 292 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKES 324 K +AE +L+K +++P H + Y ++L E E Sbjct: 293 NIAAKLGKIVEAEEVLQKALELDPGH--LGATLKYAYILKEQ----------------EK 334 Query: 325 VESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP---RKEIFL 362 E L+ + + A++ G D A+AK L M + + Sbjct: 335 YEELIAIVERAIDSGEPDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|76809563|ref|YP_333589.1| TPR repeat-containing protein [Burkholderia pseudomallei 1710b] gi|167738470|ref|ZP_02411244.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei 14] gi|217421376|ref|ZP_03452880.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] gi|242316339|ref|ZP_04815355.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] gi|254258508|ref|ZP_04949562.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] gi|254297570|ref|ZP_04965023.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] gi|76579016|gb|ABA48491.1| Tetratricopeptide repeat family [Burkholderia pseudomallei 1710b] gi|157807326|gb|EDO84496.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] gi|217395118|gb|EEC35136.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] gi|242139578|gb|EES25980.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] gi|254217197|gb|EET06581.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] Length = 1451 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 826 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 947 LERRDDAIAA--LQRALE 962 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154 H+ LA + Q ++ LL ++AL ++ A + E + + Sbjct: 880 HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 937 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + R D +A + +AL+++ P VQ Y+ +++ +A+ + Sbjct: 938 ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 992 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + N D + +L++ ++ A L + Sbjct: 993 RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 1050 Query: 275 KKRKAEVILEKI 286 + ++E +L + Sbjct: 1051 RLAESEEVLRRA 1062 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A+ Y +A+ + PD ++ A + + A + + + L Sbjct: 817 PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 872 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +AR D + A +++L + A + A+ + +A E+ Sbjct: 873 LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 927 Query: 290 NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P+ Y +L ++ + L+RAL L + ++ + V + L Sbjct: 928 EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 984 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 D+A A + + + N D+ + AL P Sbjct: 985 DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 1033 >gi|170078681|ref|YP_001735319.1| TPR domain-containing protein [Synechococcus sp. PCC 7002] gi|169886350|gb|ACB00064.1| TPR domain containing protein [Synechococcus sp. PCC 7002] Length = 318 Score = 50.7 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 83/235 (35%), Gaps = 11/235 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L E + + + A + + + + A Y+L + GDL SA + + + Sbjct: 63 AKLSEGLALIQQGNLDGAIAQFQQAIALDPLLWQAHYNLGLALGQRGDLPSAAQAFLETI 122 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P+ + + ++ W +A T+L + AI L +G+ Sbjct: 123 ALQPNFAVAYGNLGGVLIDSQNWPQAETYLRRALSLDPNL----AIAHYNLGLIYRHQGN 178 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YT 300 A+ ++ +L N A+I A+ ++ ++ A+ +++++ K +A + Y Sbjct: 179 RDAAIQAWQKARELAPNFPDATIQLAELYLAGDRPEAAQPLIQELLKSQL--NLAAVHYL 236 Query: 301 HLL----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L E + + +++ ++ A A Sbjct: 237 QGRLLTQRGDFSEALAAFRASSERDPTYANAYFAAAQLLIKNNQRAAAMPLLDYA 291 >gi|325295224|ref|YP_004281738.1| hypothetical protein Dester_1041 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065672|gb|ADY73679.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 268 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 74/184 (40%), Gaps = 13/184 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G+L+ A++Y KA+ + P+ + Y E RA + + N Sbjct: 93 IQRGELDRAEKYLRKAIKMKPNFSEGYLNLGIVYEKRGELKRARKYYEKALSNPLYLTPE 152 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-- 282 A L + ++ + + + + + +LK + I A I AK L ++ K +A+ I Sbjct: 153 VAYLRL--AMLSLRENQVEKAKEYLVRALKNNLDYIPAYIELAKILENEGKIEEAQEIYL 210 Query: 283 -LEKIWKVNPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 L ++ +P +A IY L + ++N +S + K +++ Sbjct: 211 RLVSLYPKVQYPYYRLALIYLKKKKIQHAKAL--LKKCIKLNPDSDIGI----KAKIKLE 264 Query: 340 SIDQ 343 +D+ Sbjct: 265 ELDE 268 >gi|75907401|ref|YP_321697.1| hypothetical protein Ava_1178 [Anabaena variabilis ATCC 29413] gi|75701126|gb|ABA20802.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 280 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 8/160 (5%) Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A E + P F S GD A +A+ +SP+ Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASL--GDNAGAITDYNEAIRLSPN 159 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + S +I NQ + ++ AI R A +GD + Sbjct: 160 YAEAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKY----AIAYNNRGNARASQGDSQGAI 215 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 D ++++L N A + +Q K+ A L+K Sbjct: 216 SDYNQAIRLNSNFGPAYNNRGNARAAQGDKQGALEDLQKA 255 >gi|21243030|ref|NP_642612.1| tetratricopeptide repeat protein [Xanthomonas axonopodis pv. citri str. 306] gi|78048049|ref|YP_364224.1| tetratricopeptide repeat protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294624735|ref|ZP_06703401.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664333|ref|ZP_06729698.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325925938|ref|ZP_08187306.1| putative N-acetylglucosaminyl transferase [Xanthomonas perforans 91-118] gi|21108539|gb|AAM37148.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] gi|78036479|emb|CAJ24170.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292600969|gb|EFF45040.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605899|gb|EFF49185.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325543661|gb|EGD15076.1| putative N-acetylglucosaminyl transferase [Xanthomonas perforans 91-118] Length = 392 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 90/303 (29%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI + ++ + + + + G + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGLGKTDDALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + Y + Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L + A + L + + +P + G + W P K Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|114330536|ref|YP_746758.1| TPR repeat-containing protein [Nitrosomonas eutropha C91] gi|114307550|gb|ABI58793.1| Tetratricopeptide TPR_2 repeat protein [Nitrosomonas eutropha C91] Length = 569 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 87/278 (31%), Gaps = 37/278 (13%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL GL+S ++ A K Q F + ++ +I ++ A + + + Sbjct: 288 ALAIGLLSAELDDLENAEKYFKRAL-QLGFEDADTIHFNLGRIYEISQRDAQAMDAYQKV 346 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYAT----------------KA--------LD 182 V Y + R G + +A+ Y +A Sbjct: 347 ASGDRYIPAHVRYAYLLAKRDG-VVAARHYLKTIQVSDERQRTQLLISEAQLLRDNNDFR 405 Query: 183 ISPDAPWV-------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + D ++ L + + L + + + + A A Sbjct: 406 GAYDLLDAYLRKYPEQIELLYDRALMADKIGKLDVLERDLRKLIQLKPDNAHAYNALGYS 465 Query: 236 NADKGDMI-ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 A++G+ + + ++++L + RK ++ + PE Sbjct: 466 LAERGEQLPEALALVQKAIELSPDDPYILDSLGWVYYRMGDPRKGIKYIKLAFDTRSDPE 525 Query: 295 IANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 IA Y LL + + A ++ + ++ E+ +++ Sbjct: 526 IAAHYGELLWISGAK--QDAEKIWQTALEDHPENELLL 561 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKSLISQNKKRKAEVILEKIWK 288 + D + DA E++ L SI A ++ + K +E++ Sbjct: 84 AEHATDIALRARRFDDAREAIDLWATLEPNSIQAHQAAVALFVATGQLNKVRPHIERLLV 143 Query: 289 VNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + P + + L + LK +L + E+ VS+ A Sbjct: 144 LEPE-TVDKAFMQLNKLLSHHPDKEAVLKLIRQLAASYPDLPEAHFAVSQAAWVARQFKS 202 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 A A+K+ P E +A + Q Sbjct: 203 ASEAMSQALKLRPEWE----MAAVHQGQ 226 >gi|332664957|ref|YP_004447745.1| hypothetical protein Halhy_3009 [Haliscomenobacter hydrossis DSM 1100] gi|332333771|gb|AEE50872.1| Tetratricopeptide TPR_2 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 563 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 81/252 (32%), Gaps = 24/252 (9%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL ++++ A N +A K + E L+ +E + + A E + + Sbjct: 8 ALLCAVVTLGAQNETVANKEVTR---------EALI--IEAGKEKMLGRLDKAKELYKQL 56 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L+ E A Y L A +A KA ++P W ++ Sbjct: 57 LKEYPNNELAAYELARILMVQNQPEEAIIWANKAAAVNPSNVWYAILKADAQQAMGQYKD 116 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + N ++ + + Y D + + + + Sbjct: 117 AAGVYE-QLTRQYPTQSNYFYKWAFYLVKANELNPALRVYDDLERRIGMNETLV---RLK 172 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEI 320 +Q +KA L+++ +P H +A YT + E + ++ + Sbjct: 173 HGLYHAQGDDKKAARELQRLADAHPNNIDYKH-NLAEFYTEI-GEKEQAR-ATYRKILSL 229 Query: 321 NKESVESLVIVS 332 + ++ + ++ Sbjct: 230 DPNDAKANLALA 241 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 11/222 (4%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + + E + + I + + A EK + L I T +L+ +GD+ + Sbjct: 302 EQLYPKEAKPFAISASILNKQGKKAEALEKARIALNIDDTDFAQWETLFLGLETLGDMPA 361 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 + ALD+ P+ P V + S A +NQ + ++ R LL Sbjct: 362 LLKACENALDVFPNKPEVYAYAATAELAMHNLSNAQDLINQALPISAKFPVVRQHLLSLL 421 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL---ISQNKKRKAEVILEKIWKV 289 ++ + + + + E+LKL NS A+ A +SL + +A + +K + Sbjct: 422 AMVQTQQNNPSGADQNFAEALKLNANS--ATTLAWQSLSFSLRPTGAAQALQLAQKALQT 479 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALR-----LEEINKESVE 326 P +A IY ++ L A L N +E Sbjct: 480 EPQSRLA-IYALARAQFRNSNLAEAKNKIESLLPSANPLYLE 520 >gi|332706175|ref|ZP_08426244.1| hypothetical protein LYNGBM3L_15650 [Lyngbya majuscula 3L] gi|332355012|gb|EGJ34483.1| hypothetical protein LYNGBM3L_15650 [Lyngbya majuscula 3L] Length = 372 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 76/225 (33%), Gaps = 11/225 (4%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 ++ A + L R D A K L+I PD V + + ++ Sbjct: 135 ATAYRRATRLNRDNINAYFGLAITLLRQKDYQRAIETYEKILEIEPDNLTVYQLIGAAWL 194 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + AI + + A R + L A + GD +A +++KL + Sbjct: 195 EQENSEEAIKVFQKAAEIAPNETRIQLSLGTAWLIH----GDEMAGLAAFEKAVKLAPRN 250 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTH---LLSENTVGKLKRA 314 + + L S+ KA + + P++ A Y L E V + Sbjct: 251 PEIHLQIGQILESRGNLSKALKAFRRA--ASAKPDLVEAQEYIGKILLAQEQYVPAVVTY 308 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 RL E+ ++ ++ + + + +A A+++ + Sbjct: 309 RRLIELAPKNAQAHYNLGVALKKRSRVTEALTAIEKALELYQSQR 353 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 84/248 (33%), Gaps = 16/248 (6%) Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQ 174 N L LL + + + Y A E ++ + F+ Y ++ +G A Sbjct: 44 NPQLNDLLHQARELVDAGDYQGAVAVYEEAAKLEQGNPKIFSGIG-YLQA-SLGKFQEAA 101 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KA+ + P+ P A+ A + + A NR+ ++ Sbjct: 102 AAYKKAIALQPENPNFHYALGYSLANAGD----NAGAATAYRRATRLNRDNINAYFGLAI 157 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP- 293 + D + + L++ +++ + + Q +A + +K ++ P+ Sbjct: 158 TLLRQKDYQRAIETYEKILEIEPDNLTVYQLIGAAWLEQENSEEAIKVFQKAAEIAPNET 217 Query: 294 ----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 + + L+ + + L + ++ + E + + +I G++ +A Sbjct: 218 RIQLSLGTAW--LIHGDEMAGLAAFEKAVKLAPRNPEIHLQIGQILESRGNLSKALKAFR 275 Query: 350 LAMKIAPR 357 A P Sbjct: 276 RAASAKPD 283 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 82/236 (34%), Gaps = 13/236 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E GD A +A + P + + ++ A + E Sbjct: 55 RELVDAGDYQGAVAVYEEAAKLEQGNPKIFSGIGYLQASLGKFQEAAAAYKKAIALQPEN 114 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A A+ GD + + +L ++I A A +L+ Q ++A Sbjct: 115 PN----FHYALGYSLANAGDNAGAATAYRRATRLNRDNINAYFGLAITLLRQKDYQRAIE 170 Query: 282 ILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 EKI ++ P+ +Y L EN+ +K + EI + + L Sbjct: 171 TYEKILEIE--PDNLTVYQLIGAAWLEQENSEEAIKVFQKAAEIAPNETRIQLSLGTAWL 228 Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G A A+K+APR EI L + QI ++ N K L + A A PD Sbjct: 229 IHGDEMAGLAAFEKAVKLAPRNPEIHLQIGQILES-RGNLSKALKAFRRAASAKPD 283 >gi|255076833|ref|XP_002502083.1| predicted protein [Micromonas sp. RCC299] gi|226517348|gb|ACO63341.1| predicted protein [Micromonas sp. RCC299] Length = 662 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 97/285 (34%), Gaps = 33/285 (11%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLE---VQIALAERQYNIAHEKLE-MMLQIPATREF 155 +AR Y T E V L Q ++ A + + +P + Sbjct: 238 GDVARCRAVYEDAVETMEREVDVDQLYVKFAQFEELVKEPERARAIYKYALDNLPKEKAQ 297 Query: 156 AVYSLYFESCRI-GDLNS--------AQRYATKALDISPDA--PWVTEAVVQQYVLAKEW 204 VY + + GD + + + + +P + W +++ + Sbjct: 298 EVYKAFTTFEKQYGDRGAIEDVIVGKQRVKYEEEVRANPTSYDSWFDYTRMEEQ--HGDI 355 Query: 205 SRAITFLNQKK-----KNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCD- 257 +A + +N K + + L I +L E D D + E LKL Sbjct: 356 EKAREVYERAIANVPPQNEKRYWKRYIFLWINYALFEEIDAQDPERTREVYRECLKLIPH 415 Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A++ I Q + A IL ++P +I Y + E +G + R Sbjct: 416 KSFSFSKVWIMASQFEIRQKRLDAARKILGMAIGMHPKEKIFKTYIDM--EMQLGNIDRC 473 Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L E+N + S V +++ + ++A A +A+ + Sbjct: 474 RTLYEKALELNPFNCSSWVKFAELEKSLAETERARAIFEIAVGMD 518 >gi|46198571|ref|YP_004238.1| hypothetical protein TTC0263 [Thermus thermophilus HB27] gi|46196193|gb|AAS80611.1| hypothetical conserved protein [Thermus thermophilus HB27] Length = 355 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 89/242 (36%), Gaps = 17/242 (7%) Query: 160 LYFESCRI----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 LY ++ G L A A ++P + Y L E +A L Q Sbjct: 110 LYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQAL 169 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A+ + S+ D+ +A Y A+E + + A +L+ + K Sbjct: 170 ALEDTPEIRSALAELYLSMGRLDEA--LAQYAKALEQAPKDLDLR---VRYASALLLKGK 224 Query: 276 KRKAEVILEKIWKVNPHPE-----IANIYTHL-LSENTVGKLKRALRLEEINKESVESLV 329 +A +LE+ ++ P + Y L ++ L+ A+ L + + Sbjct: 225 AEEAARVLEEGHRIKPLNAEGWYTLGQAYLALGRTKEAGVALENAVALAPLR--FPAAYY 282 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 + ++ L +G +A ++ +A+++ P++ + + + + Y Q AL Sbjct: 283 YLGQVYLALGDYPKAKSRLTVAVRLEPKRAEYRYSLCLANEKLGDKEGARYQCQEALKLK 342 Query: 390 PD 391 PD Sbjct: 343 PD 344 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 69/206 (33%), Gaps = 9/206 (4%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + +G ++A +AL +P P + + + + A+ Sbjct: 35 LGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTP 94 Query: 220 EW-----NRNRAILLIARSLENADKGD--MIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + A + + R E+ ++G + + ++ ++ + Sbjct: 95 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL 154 Query: 273 QNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ KAE L++ + PEI A +L L + + E + ++ V Sbjct: 155 LGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVR 214 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 + L G ++A +I P Sbjct: 215 YASALLLKGKAEEAARVLEEGHRIKP 240 >gi|39996532|ref|NP_952483.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39983413|gb|AAR34806.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|298505548|gb|ADI84271.1| TPR domain protein [Geobacter sulfurreducens KN400] Length = 573 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 75/221 (33%), Gaps = 20/221 (9%) Query: 149 IPATREFAVYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 P +LY + GD++ A A++ P + ++ AV + Y+ Sbjct: 36 KPTVDIAGSRALYIFARARLQLLEGDVDGALTLLNGAIEADPGSAYLHTAVAEIYMKTGR 95 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A+ + + + R + + D+ D + AIE L + A Sbjct: 96 AEDALKACENAIRLDPSYRQARLLAGAILASLKRDR-DAVPHLEKAIE---LDPSREEAY 151 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 I A S + + KA L+ + KV P + Y ++K K+ Sbjct: 152 IHLAVSYLKLFEYEKAVNTLKSLVKVKPESSLGYYYL----GKAYDQMKLQKEAANYYKK 207 Query: 324 SVESLVIVSKIALE-------MGSIDQAHAKAMLAMKIAPR 357 ++E + +E MG D+A A + I P Sbjct: 208 AIELKPDFEQAIIELGIVQEGMGLHDEAVATYKSLLDINPY 248 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 56/159 (35%), Gaps = 5/159 (3%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ K + +RA+ + AR+ +GD+ + +++ S Sbjct: 26 GALPVNEASFKPTVDIAGSRALYIFARARLQLLEGDVDGALTLLNGAIEADPGSAYLHTA 85 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A+ + + A E +++P +A L + + + E++ Sbjct: 86 VAEIYMKTGRAEDALKACENAIRLDPSYRQARLLAGAILASLKRD-RDAVPHLEKAIELD 144 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 E+ + ++ L++ ++A +K+ P + Sbjct: 145 PSREEAYIHLAVSYLKLFEYEKAVNTLKSLVKVKPESSL 183 >gi|289665790|ref|ZP_06487371.1| tetratricopeptide repeat protein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289671203|ref|ZP_06492278.1| tetratricopeptide repeat protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 392 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 92/303 (30%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI + ++ + + + + N G + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRNRGLGKTDDALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + + Y + Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMSAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L + A + L + + +P + G + W P K Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|312220618|emb|CBY00559.1| hypothetical protein [Leptosphaeria maculans] Length = 704 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 28/249 (11%) Query: 88 LYTGLMSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-M 145 L G + N L + + + + +L +I A+ + + A + Sbjct: 351 LMRGEAHLRMGNPNALGEAQNVAMGLLRYNNQDPDALVLRGRILYAQGENDKAIQHFRQA 410 Query: 146 MLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + P ++ V +L + + A + Sbjct: 411 LSCDPDFKDA-VRNLRMVQKLERMKQEGNAAF-----------------------KAGRY 446 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 AI +Q + +L R+L + + A+ D +L+L N A Sbjct: 447 QEAIDTYSQALDVDPSNRNTNSKILQNRALCHTRQKSWKAAIADCDRALELDPNYTKARK 506 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 AK+L +A L+ I + NP P IA E K K ++ ++K+ Sbjct: 507 TRAKALGESGNWEEAVRDLKAIQEANPSEPGIAKEIREAEMELKKSKRKDYYKILGLSKD 566 Query: 324 SVESLVIVS 332 + E+ + + Sbjct: 567 ATETEIKKA 575 >gi|119187631|ref|XP_001244422.1| hypothetical protein CIMG_03863 [Coccidioides immitis RS] Length = 729 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 16/166 (9%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------E 192 A L Q P Y + GD A ++ +AL + PD+ + Sbjct: 417 AMSLLRENSQDPDALFLRGRLFYLQ----GDNEQAIKHFKRALSLDPDSTQTVKYLRMVQ 472 Query: 193 AVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 +++ A+ + AI + + LL R+ + + + + Sbjct: 473 KLLRHKDEGNAAFKARRYREAIKLYTAGLEIDPTNKDINSKLLQNRAQAHVNLNEYEQAI 532 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D ++L+L A AK+ KA L+ I + NPH Sbjct: 533 EDCTKALELDPTYSKAKRVRAKAYGGTGDWEKALNELKSIAESNPH 578 >gi|95928392|ref|ZP_01311140.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95135663|gb|EAT17314.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 884 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 105/356 (29%), Gaps = 48/356 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G++S+ +I A++ + Q F L I + Y A L L+ Sbjct: 236 GMLSLDMGDIVGAQRYADALKQN--FPKHPAGKRLNGMILYVQGDYKAAAVALRESLKG- 292 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 Y L R+ A +ALD+ P+ + + K I Sbjct: 293 MADLAGYYFLGLTEFRLKHYELALNQFQQALDLQPNHVQARVMLGMTLLQQKRIDDCIYQ 352 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + Q + + +L A KGD + ++ L + Sbjct: 353 VTQVLQEHDDLAIVHNVLGTAY----LSKGDFDLATRHFDRAIALDPLLADPHLKKGLLN 408 Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----EIANIYT-------------HLLSENTVGKL- 311 +SQ +KAE LEK +V P +A++Y + + L Sbjct: 409 LSQQNSQKAEFELEKALEVAPESLKTRFLLASLYLKQENYQGVIDLLQESVGSSEQDALL 468 Query: 312 ---KRALRLEEIN---------------KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 A L + + ++ L ++A + ++ Sbjct: 469 YNYMAAAYLAQKQDEEGLAALKKAKAIKPNYLAPYFNLANYYLIHQQREEALEEYRAVLE 528 Query: 354 IAPR-KEIFLLLAQIEQANSHNTDK-ILYWTQSALHAMPDPLWISDDGYLSSVWLP 407 +AP + +A +E+ +N Y + +++ GY P Sbjct: 529 VAPDNLRALISMASLEEVGGNNAAAEAGYERARKTNEPRG--YMALAGYFQRSSAP 582 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 82/281 (29%), Gaps = 44/281 (15%) Query: 129 IALAERQYNIAHEKLEM------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L++ +++A + +L P + L S + A+ KAL+ Sbjct: 373 AYLSKGDFDLATRHFDRAIALDPLLADPHLK----KGLLNLSQQN--SQKAEFELEKALE 426 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILLIARSLE--- 235 ++P++ + Y+ + + I L + ++A +N A L + E Sbjct: 427 VAPESLKTRFLLASLYLKQENYQGVIDLLQESVGSSEQDALLYNYMAAAYLAQKQDEEGL 486 Query: 236 -----------------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + L++ +++ A I A Sbjct: 487 AALKKAKAIKPNYLAPYFNLANYYLIHQQREEALEEYRAVLEVAPDNLRALISMASLEEV 546 Query: 273 QNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 AE E+ K N P +A S + + ++ L Sbjct: 547 GGNNAAAEAGYERARKTNEPRGYMALAGYFQRSSAPQKSAQVVEDAYHAHPQNPTILKAR 606 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQAN 371 ++ LE A ++P + L A IE Sbjct: 607 GRLKLEQKDFPAAIETFKALEAVSPTAGMPFLAAAWIEAGE 647 Score = 37.2 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 92/280 (32%), Gaps = 25/280 (8%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 S F + Y + + + + + + ++ I A Y S +GD+ Sbjct: 186 SALKKFPQQEKFYFMLASLKARQGRMDETLNAYQQVIAIDPGNIIARYWAGMLSLDMGDI 245 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 AQRYA P P + ++ A L + K + + L Sbjct: 246 VGAQRYADALKQNFPKHPAGKRLNGMILYVQGDYKAAAVALRESLKGMADLAGYYFLGLT 305 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR----KAEVILEKI 286 L++ + + + ++L L N + A + +L+ Q + + +L++ Sbjct: 306 EFRLKHYE-----LALNQFQQALDLQPNHVQARVMLGMTLLQQKRIDDCIYQVTQVLQE- 359 Query: 287 WKVNPHPEIA-------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 H ++A Y + + R ++ + + + L Sbjct: 360 -----HDDLAIVHNVLGTAYLSKGDFDLATR--HFDRAIALDPLLADPHLKKGLLNLSQQ 412 Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKI 378 + +A + A+++AP + LLA + + I Sbjct: 413 NSQKAEFELEKALEVAPESLKTRFLLASLYLKQENYQGVI 452 >gi|325922082|ref|ZP_08183876.1| putative N-acetylglucosaminyl transferase [Xanthomonas gardneri ATCC 19865] gi|325547419|gb|EGD18479.1| putative N-acetylglucosaminyl transferase [Xanthomonas gardneri ATCC 19865] Length = 392 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI + ++ + + + + + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGSSKTDEALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + Y + Sbjct: 208 VARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L + A + L + + +P + G + W P K Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|313886421|ref|ZP_07820141.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924137|gb|EFR34926.1| tetratricopeptide repeat protein [Porphyromonas asaccharolytica PR426713P-I] Length = 659 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 20/195 (10%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A A ++Q+H E Y L +IAL + A ++ L I + Sbjct: 142 GAEQYERADSAALALTQRH--PKEARGYFLAAEIALRRQDTVAAEGRIAEGLAIDSLSAA 199 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAI 208 L + GD A RY K+++ P + + +++++A+ Sbjct: 200 PYRMLSTIAYLRGDYEGALRYHDKSIEQEPGQASDYINRGLTRYKLKEYRGAMEDYNQAL 259 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + A+ R+L + GD+ + D +E ++L ++ A A Sbjct: 260 LL-----------TPHDAVARHNRALLRIEVGDLQGAREDLLEVVRLQPTNLTAHFNLAL 308 Query: 269 SLISQNKKRKAEVIL 283 + R+A L Sbjct: 309 VQTQTGQYREAIETL 323 >gi|330873389|gb|EGH07538.1| cellulose synthase operon protein C [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 1305 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 72/231 (31%), Gaps = 51/231 (22%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEW 221 + G L++AQ + L P ++ + + A+ L+ ++ + Sbjct: 399 QAGQLDAAQAGYRQVLATRRGNPQAIRGLINVLAQSGQADEALRLLDTLSPGEQAKLGDS 458 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R +A+ + +GD+ A+ +++K +++ A+ + ++ KA Sbjct: 459 GRFKALRSTQVARLAEQRGDVRAAQAALKDAVKNDPDNVWTRFDLARLYLKTDEAPKARA 518 Query: 282 ILEKIWKVNP----------------------------------HPEIANIYTHL----- 302 +++++ K P P++ + + Sbjct: 519 LIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFVRIPVDQRTPDMKALADEITMTVQ 578 Query: 303 --------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 L RL+ + S E + ++ ++ G + Sbjct: 579 INLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDAGEPARGR 629 >gi|218264397|ref|ZP_03478254.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii DSM 18315] gi|218222035|gb|EEC94685.1| hypothetical protein PRABACTJOHN_03950 [Parabacteroides johnsonii DSM 18315] Length = 999 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 23/181 (12%) Query: 122 VYLLE---VQIALAE---RQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNS 172 LE + A E Y A E + + + P ++ A + + + G Sbjct: 797 TKFLEESVARTAEIEYLGNDYPAALESFKRLQIVAENPENKQAARLGIMRCALQTGQQKD 856 Query: 173 AQRYATKAL---DISPDA-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-I 227 A A + L +SP+ + Y+ K+ ++A+ L + K+ + + A Sbjct: 857 ALLAADELLKEPKLSPELEAEARYVRAKAYIDQKQANKALADLKELSKDTRTVHGAEAKY 916 Query: 228 LLIARSLENADKGDMIASYHDAIESLK-----LCDNSIMASICAAKSLISQNKKRKAEVI 282 LL + D + + IE+ L I A I Q +A Sbjct: 917 LLAQLYYDTNDDKNAEKVLMNFIENGTPHQYWLARGFI----LLADIYIRQGDDFQARQY 972 Query: 283 L 283 L Sbjct: 973 L 973 >gi|198284469|ref|YP_002220790.1| tetratricopeptide repeat-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248990|gb|ACH84583.1| Tetratricopeptide TPR_2 repeat protein [Acidithiobacillus ferrooxidans ATCC 53993] Length = 553 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 110/391 (28%), Gaps = 39/391 (9%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYA 177 E L YLL + A +RQ +A + ++ ++ GD A + A Sbjct: 33 EQLYYLLVAEFATVQRQPQLAIPAWQKAAKLAPEPNVLRR--ATQAIARFGDFQDALQLA 90 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + +P + + + + +A+ L + + + + + Sbjct: 91 RRWRQAAPGSAEADQFEAALLLTTGQDEQALQLLQATLARFPDDPK----VTLQFAELLV 146 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292 G + S A + + + + A LEK + P Sbjct: 147 THGRSGEARRLLSALADKDPKSAAAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAA 206 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +A + L+ + E+ + ++ + L+MG + QA+ Sbjct: 207 ISLAEALQAVQG--PAAALRSIQSFTASHPEATLARQYLAALYLQMGGLTQAYRLYQDMA 264 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYL---SSVWLPL 408 + P LL + + + + A + A P+ + G L W Sbjct: 265 RQNPDDPDILLSLGLMDIDRKDWKRAESVLLRARNLAPQSPVPVYYLGRLYEAQDRWA-- 322 Query: 409 SPISKTLCYFEWKIPTKS-PEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVS 467 +W S P Y + E + +E D P ++ Sbjct: 323 -------EALQWYQRIHSGPLYPAVELRSARVEYLLGHHDKAIDKLRALAAAHPQDAQIP 375 Query: 468 SFEDSTIHPL-----------DPHIRQPDDP 487 E + D R P+ P Sbjct: 376 LLEAGLLQDSGHLPQALQVINDALQRMPEQP 406 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 90/301 (29%), Gaps = 44/301 (14%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A ++ + F ++ V L ++ + + A L + Sbjct: 112 LTTGQDEQALQLLQATLAR--FPDDPKVTLQFAELLVTHGRSGEARRLLSALADKDPKSA 169 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A Y+L A + KAL I PD ++ + + + A+ + Sbjct: 170 AAYYALGRIDLLEKRPEHAISWLEKALGIRPDWQEAAISLAEALQAVQGPAAALRSIQSF 229 Query: 215 KKNAKEWNRNRAIL------------------------------LIARSLENADKGDMIA 244 + E R L L++ L + D+ D Sbjct: 230 TASHPEATLARQYLAALYLQMGGLTQAYRLYQDMARQNPDDPDILLSLGLMDIDRKDWKR 289 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-------KVNPHPEIAN 297 + + + L S + + +Q++ +A W + P E+ + Sbjct: 290 AESVLLRARNLAPQSPVPVYYLGRLYEAQDRWAEALQ-----WYQRIHSGPLYPAVELRS 344 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L + + + L + + + ++ + + + G + QA A++ P Sbjct: 345 ARVEYLLGHHDKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPE 404 Query: 358 K 358 + Sbjct: 405 Q 405 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 76/275 (27%), Gaps = 14/275 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L A+ + M + L D A+ +A + Sbjct: 243 LAALYLQMGG-LTQAYRLYQDMARQNPDDPDILLSLGLMD--IDRKDWKRAESVLLRARN 299 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P +P + + Y W+ A+ Q+ + + + + + G Sbjct: 300 LAPQSPVPVYYLGRLYEAQDRWAEALQ-WYQRIHSGPLYP----AVELRSARVEYLLGHH 354 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH 301 + + A L +A ++ + P P + Sbjct: 355 DKAIDKLRALAAAHPQDAQIPLLEAGLLQDSGHLPQALQVINDALQRMPEQPSLWYAQGA 414 Query: 302 LLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAPRK 358 + + + K + + ++ + +E + +A A+ ++P Sbjct: 415 IYEQLKDYPAMEKAMRTVIHLAPNHAQAYNFIGYSLVERHSDLAEAQKLLTKALSLSPDN 474 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 L + D+ L + Q A A+PD Sbjct: 475 PEILDSVGWLYHARGDNDRALGYLQRAHAALPDEA 509 >gi|171320227|ref|ZP_02909285.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MEX-5] gi|171094516|gb|EDT39572.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MEX-5] Length = 754 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 73/259 (28%), Gaps = 30/259 (11%) Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 +++ A E + + T + +C++G + +A+ + D Sbjct: 18 AGRFDDARVLYEAIRRDEPEQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 ++ + AI + A ++ A D GD A+ Sbjct: 73 VYLNN-LGNMLRAHGRLDDAIGAYRRAIALAPDY----AEAHSNLGNALRDAGDADAAML 127 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---- 303 ++L L + A +L + + A EK ++P Y Sbjct: 128 SCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP------GYAQARFNQG 181 Query: 304 -----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + + + + + E ++ A A + Sbjct: 182 NVLRAQGRPDEAIACYRHTIALQPDLHAAHHALGALLFERDDLEAAIESLTRAAESGEAD 241 Query: 359 EIFLLLAQIEQANSHNTDK 377 +F L A +E+A + Sbjct: 242 CLFHLAAALERAGDLDGTV 260 >gi|60682719|ref|YP_212863.1| TPR repeat-containing protein [Bacteroides fragilis NCTC 9343] gi|60494153|emb|CAH08945.1| putative TPR repeat domain exported protein [Bacteroides fragilis NCTC 9343] gi|301164197|emb|CBW23755.1| putative TPR repeat domain exported protein [Bacteroides fragilis 638R] Length = 289 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 8/167 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + L I L + + A+ ++M + T + + Y R D A+ + Sbjct: 111 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 168 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L+I P + ++ A+ LNQ E A+L +AR+ D Sbjct: 169 LLEIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPE----DAVLYVARADVERDM 224 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L +SI A + + Q KK A+ EK Sbjct: 225 KHDDLALVDLDEAIRLAPDSIDAYLLRGDIYLDQKKKSLAKADFEKA 271 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 16/194 (8%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q K + N + A+L L G + +L + ++ + Sbjct: 57 AEDLLKQALK-LEPKNAHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILLNR 115 Query: 267 AKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLE 318 A + Q + KA + +K + + Y + L + +L RL Sbjct: 116 AAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQRLL 170 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377 EI+ ++ + ++ + + +A + P +++ A +E+ H+ Sbjct: 171 EIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPEDAVLYVARADVERDMKHDDLA 230 Query: 378 ILYWTQSALHAMPD 391 ++ A+ PD Sbjct: 231 LVD-LDEAIRLAPD 243 >gi|297259331|ref|XP_001113447.2| PREDICTED: pre-mRNA-processing factor 6 [Macaca mulatta] Length = 824 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 462 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 519 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 520 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 579 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 580 LCEEALRHYEDFPKLWMMKGQIEEQKEMMENAREAYNQGLKKCPHSTPLWLLLSRLEEKI 639 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 640 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 697 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 698 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 755 Query: 391 D 391 D Sbjct: 756 D 756 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 24/176 (13%) Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---------AKSLISQN----KKR 277 ++ + S +E+ +L ++ A + I R Sbjct: 211 GQARNTLMDMRLSQSEDVWLEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELETDIR 270 Query: 278 KAEVILEKIWKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIA 335 + +L K + P+ + L E+ L RA E SVE + ++++ Sbjct: 271 AKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELXLALARL- 326 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + + A A + P I++ A++E+A + NT + A+ ++ Sbjct: 327 ---ETYENARKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 378 >gi|220918656|ref|YP_002493960.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956510|gb|ACL66894.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 637 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 71/209 (33%), Gaps = 11/209 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+GD + A+R +AL P + V A+ + A+ L R R Sbjct: 150 RLGDRDGAERDLRRALAQRPSSGAVRIALGTLLRRRGAIAEAVALLEPAAAAGSNEERAR 209 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVIL 283 A++ + + A + + +++ + + A++ + +A +L Sbjct: 210 ALVALGAAHLAAGR--RAEAGRAFEQAVLYAPARVEIRLGVARAWLGGDAGDAERALSVL 267 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + P H + + + G + R ++ + + V ++AL Sbjct: 268 ARAADLAPDVPAVHAALGRA--RERTGDDAGAAEAYERALRLDPSNRYARRRVLRLALAA 325 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +A +A + P LA + Sbjct: 326 RDFARARHEADRLVADGPEVAEHHFLAAL 354 >gi|108761603|ref|YP_629581.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108465483|gb|ABF90668.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 639 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 82/275 (29%), Gaps = 14/275 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL++ +A + Y + + + + + A E L++ Sbjct: 116 RGLLARVLDERDVA--ISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKL 173 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A A +L G A+ +A + + + AI Sbjct: 174 DAKLNVARVNLGKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAIA 233 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + A A + +KGD + ++++ A + Sbjct: 234 EYQRTLAAAP----KHASAHNNMGVAFNEKGDPRKATDAFLKAIAADPKFAEAHFNLGLA 289 Query: 270 LISQNKKRKAEVILEKIWKVNPHP------EIANIYT-HLLSENTVGKLKRA-LRLEEIN 321 +A E+ + P ++ ++Y + V K A + E Sbjct: 290 YYQLGDFARATKAFERAVVLEPQRSSGPYTQLGHLYLTQGKKKQAVEAFKTAIAKSAEDG 349 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 K++ E+ +++ L +G D+A A A+ P Sbjct: 350 KKTTEAYQGLARAWLSLGKADEAVATLKTAVGAFP 384 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 77/265 (29%), Gaps = 17/265 (6%) Query: 105 KMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSL 160 K ++ L+ L + + A L+ + + A L Sbjct: 59 KKAVAPLKKLVAQEPDLIPPKLALARALRLSGEPEQARTVLDTAIAAFPEESTLRAERGL 118 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + + + + A A++++P + + + A AI + K + Sbjct: 119 L--ARVLDERDVAISQYAVAVELAPQDAELRFNLGEALQRANRTDDAIEAYREALKLDAK 176 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 N R L A+KG + E+ + A L+ +N A Sbjct: 177 LNVARVNL----GKALAEKGLNGEAKETLREATRQKLGDTEAHYNLGVLLMRENDLDGAI 232 Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++ P H + + + L+ + + E+ + Sbjct: 233 AEYQRTLAAAPKHASAHNNMGVAFNE--KGDPRKATDAFLKAIAADPKFAEAHFNLGLAY 290 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEI 360 ++G +A A+ + P++ Sbjct: 291 YQLGDFARATKAFERAVVLEPQRSS 315 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 74/282 (26%), Gaps = 32/282 (11%) Query: 98 HNIPLARKMHSYVS----QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE----MMLQI 149 + A K Q+ + L +L L + + A E + + Sbjct: 294 GDFARATKAFERAVVLEPQRSSGPYTQLGHL-----YLTQGKKKQAVEAFKTAIAKSAED 348 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A L +G + A A+ P A + + AI Sbjct: 349 GKKTTEAYQGLARAWLSLGKADEAVATLKTAVGAFPKDASARAAYGEALRAKGDLDGAIA 408 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMI-ASYHDAIESLK------LCDNSIMA 262 + K A A+ + K + + D + + M Sbjct: 409 EYEEGVKLAPTPENRLALADVYAQKRVGAKAQPLYKALLDEDPANRAAKLALADLLLAMG 468 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEIN 321 AA+ L+ +A+ +A + H + + + Sbjct: 469 DYVAAEGLLKPKDGEEADTA-----------ALARLGIVHSRRGRPDLAVSELEAVVAKD 517 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 +E+ + I L G +A + + PR + LL Sbjct: 518 PAQLEARAELGFIYLRGGDGAKARKVLTSVLSVDPRHSLGLL 559 >gi|312183651|gb|ADQ42395.1| conserved hypothetical protein [Methanosaeta harundinacea] Length = 673 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 101/299 (33%), Gaps = 48/299 (16%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVY 123 L + + LH+ G+++ A +I AR+++ + Q + Sbjct: 283 LGDKSAVSRSLHQ-----------LGMLAQATGDITEARRLYGESLKILQDLGDKSGVAR 331 Query: 124 LLE--VQIALAERQYNIAHEKLEMMLQ------IPATREFAVYSLYFESCRIGDLNSAQR 175 L +A A A E L+ +T ++++L + GD+ A R Sbjct: 332 SLHQLGMLAQATGDIVEARRFYEESLKISEELGDKSTISKSLHNLGAIAQATGDIVEAGR 391 Query: 176 YATKALDISPDAPWVTEAVVQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILL 229 + + L I+ + + + L + S A + K +E I + Sbjct: 392 FYNEGLKIASELGDKSGIASSLHQLGMLAYDTGDISEARRLYGESLKIKRELGDKSGIAI 451 Query: 230 IARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + GD+ + ESLK+ ++ S A+SL +A Sbjct: 452 SLHECGILAQRSGDLTEANRLFNESLKISEDLGDMSGI-ARSLHQLGVLAQARG------ 504 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +IA Y HL ++ LK L ++ SL + +A G I +A Sbjct: 505 ------DIAEAY-HLYGDS----LKILQDLGDM-SGISRSLHQLGLLAQLSGDIGEAKR 551 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 76/208 (36%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMM 146 G+++ + ++ A ++ + + + + L +A A A+ Sbjct: 457 GILAQRSGDLTEANRLFNESLKISEDLGDMSGIARSLHQLGVLAQARGDIAEAYHLYGDS 516 Query: 147 LQI--PATREFAV-YSLYFE---SCRIGDLNSAQRYATKALDISPDAPWVTEAV-----V 195 L+I + SL+ + GD+ A+R ++L IS + + + + Sbjct: 517 LKILQDLGDMSGISRSLHQLGLLAQLSGDIGEAKRLYGESLKISKELGDKSTFLKSLFNL 576 Query: 196 QQYVL-AKEWSRAITFLNQKKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIES 252 + E +A++ K A++ + A L +L ++G++ + E+ Sbjct: 577 GVLAQNSGELKKALSLYGDSLKIAQDLDDKTGIAFALAQSALLEEEEGNLEQALDLIREA 636 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAE 280 L + A+ + + +K+ A Sbjct: 637 EALFMKLESPTAENARYVRERLEKKIAV 664 >gi|237746995|ref|ZP_04577475.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS] gi|229378346|gb|EEO28437.1| N-acetylglucosaminyl transferase [Oxalobacter formigenes HOxBLS] Length = 391 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 15/174 (8%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +L P R A Y L + + G L+ A+ + L +P + Sbjct: 84 GETERAIRMHQNLLLRPDLPPEQRMQAQYELGQDFLKAGLLDRAEEVFQE-LTETPYSIQ 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248 A+++ + KEW +AI + + N+ A + + + Sbjct: 143 ARRALLEIFQREKEWEQAIDAAKALQNSGTGSRNKQIAQFYCELAEDELVNTHPEKALPL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIAN 297 ++ + S+ A+I +L++ K +A W+ PH +A Sbjct: 203 LETAISIDRMSVRATILTGDALMALGKPEEAL----TAWRRVEKQSMPHTVLAA 252 >gi|296447238|ref|ZP_06889168.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b] gi|296255297|gb|EFH02394.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b] Length = 789 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 82/280 (29%), Gaps = 40/280 (14%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + + + A +L + A++ L GD + +A+ ++P Sbjct: 62 DARARHEAGRLDEAETLYRAILGAEPSHAEALHLLGLVRVERGDALTGAELIGRAMALTP 121 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---------------NRNRAILLI 230 A ++ + A+ R AIL Sbjct: 122 GAAVHHNSLATAFRALGRHEDALREARAAVALRPRSGELRCNLATMLDELGQREEAILHY 181 Query: 231 ARSLE---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + A+ G + +++L + A + L+ + + Sbjct: 182 RSAADCAPERAEIWYNLANLLAEVGPAREAEEAFANAVRLAPGFVAAQGNYGRWLMRRGR 241 Query: 276 KRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +A L + ++ P P +A L + L R ++ ++ Sbjct: 242 FAEAVERLAEAARLAPGEPSYWNNLAAALQEL--GSFADALACYQRALALDPRHADAFYN 299 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQI 367 + + G D+A A + A PR I +A++ Sbjct: 300 LGCLLHLAGDADKAVAHHVGAAAADPRHGAARIAACMAEL 339 >gi|238028665|ref|YP_002912896.1| TPR domain-containing protein [Burkholderia glumae BGR1] gi|237877859|gb|ACR30192.1| TPR domain protein [Burkholderia glumae BGR1] Length = 614 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 102/282 (36%), Gaps = 17/282 (6%) Query: 94 SIAAHNIPLARKMHSYV--SQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMM 146 + A + LA+ S ++ N L +L ++AL Q A++ + Sbjct: 53 AAGASDA-LAQSAFSPAFPEEKKDLPNVPLTAQIVYQVLAAEVALQRSQPAPAYQTYLAL 111 Query: 147 LQIPATREFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + A + + + D +A +PD+ ++ VLA + Sbjct: 112 ARDTKDPRMAQRATEIALAAQSPADALAAANLWR---QFAPDSNRASQVDSALLVLAGKP 168 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A L ++ A NR A+L + + + + + LK + A + Sbjct: 169 AEAEPLLARELARANGENRGDALLALQALIS--RGPNRVEGLTVLQDLLKNDLDRPEAQL 226 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEINKE 323 A+ ++ + + A L++ K+ P A + + + + + + N + Sbjct: 227 AIARQQLATDDRAGAVASLKQALKLRPDYLPAALMLSQMGPDERAVGVASFEKFVQQNPK 286 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 S E + ++++ L ++ A + + P++ L+A Sbjct: 287 SREGRLALAQLYLADNRLEDAQKQFEAMRRNDPKE-PAPLMA 327 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 70/223 (31%), Gaps = 12/223 (5%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + + Q P +RE +L L AQ+ P P A+ + K Sbjct: 279 KFVQQNPKSRE-GRLALAQLYLADNRLEDAQKQFEAMRRNDPKEPAPLMALALVKIQEKH 337 Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A L Q + A++ + + ++ D + + + I A Sbjct: 338 YDDAQADLKQYIELAQKRQGADVGQAYVYLAQIAIEQNDDAQASQWLDKIDASSPHYIPA 397 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGKLKRAL 315 + A+ L Q K +A +L I +PH + + ++ +L +A Sbjct: 398 QVTRAQLLAKQGKTDEARQVLAGIQVSDPHDAAVIARTDASLLFAAKRYREAADRLAQA- 456 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E + + + ++G + L + P Sbjct: 457 --VEQFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLISAQPDS 497 >gi|116622586|ref|YP_824742.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225748|gb|ABJ84457.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 907 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--P 188 L + A + + ++ + G+ ++A+ + KAL++ P Sbjct: 714 LLQGDLKGAEYAFRRVTEAEPGYPDGWINVARALIQEGETDAAKPFLAKALELGPGLGRA 773 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 W +A V ++ A+ L + + ++ R+R +L Sbjct: 774 WFFQAAV--QKADGDYDGALHSLERAR---AQYPRDRVVL 808 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 5/81 (6%) Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANS 372 R+ E + + V++ ++ G D A A+++ P + A +++A+ Sbjct: 726 FRRVTEAEPGYPDGWINVARALIQEGETDAAKPFLAKALELGPGLGRAWFFQAAVQKADG 785 Query: 373 HNTDKILYWTQSALHA--MPD 391 + + A A D Sbjct: 786 DYDGALHS-LERA-RAQYPRD 804 >gi|328544380|ref|YP_004304489.1| TPR repeat [polymorphum gilvum SL003B-26A1] gi|326414122|gb|ADZ71185.1| TPR repeat [Polymorphum gilvum SL003B-26A1] Length = 621 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 74/202 (36%), Gaps = 8/202 (3%) Query: 161 YFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++ + G++ AQR L +P++P + Y R + F+ + Sbjct: 15 MRQALALQQAGEVEKAQRIYKAVLKKAPNSPDANHLLGVSYRQLGFPRRGLDFIRKAIAL 74 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A + A L AR+L + A +++ L A A +L + Sbjct: 75 APDRAPYHANL--ARTLSDIPGTPAEEVLAAAEKAVALNPGLAEAHNMKAIALNRLGRDT 132 Query: 278 KAEVILEKIWKVNP-HPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKI 334 +AE I + +P H + Y LL + + L+ ++ ++ E+LV S+ Sbjct: 133 EAEEIFRFLIAAHPRHADAHRNYGVLLRDRGDHKEALRFFEAAALLDPDNPETLVQRSRA 192 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 E+ + + A+ P Sbjct: 193 RFELDDFAASQPELEAALARFP 214 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 42/153 (27%), Gaps = 4/153 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E ++ A + GD A R+ A + PD P Sbjct: 129 GRDTEAEEIFRFLIAAHPRHADAHRNYGVLLRDRGDHKEALRFFEAAALLDPDNPETLVQ 188 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + +++ + L L + GD A ++ Sbjct: 189 RSRARFELDDFAASQPELEAALARFPA----HGDLNHEMARLMFKIGDAYKGLPYAEAAV 244 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +++ + L S + R+A L K Sbjct: 245 ADEPDNVHRQVTLGVILQSLGRSREAVAALRKA 277 >gi|77164576|ref|YP_343101.1| TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707] gi|254434149|ref|ZP_05047657.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani AFC27] gi|76882890|gb|ABA57571.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707] gi|207090482|gb|EDZ67753.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani AFC27] Length = 1129 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 22/219 (10%) Query: 185 PDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P P V + A+ L Q A ++ G + Sbjct: 210 PSGPEAQGIHVALRAYRDGDLLTALGRLEQ-----VPIGAREASYFTLQAALLLVVGRID 264 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYT 300 + + +L+L + A A ++QN+K A + + K++P P+IA Y Sbjct: 265 EARPNIQRALQLDPDHGTAYALQAIIALAQNRKEDALRLARQGAKLDPQSSIPQIALSYV 324 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---- 356 + N L+ A + E+ + V+++ L +G +D A A A+ + P Sbjct: 325 YQGRFNIEQALQHAQQATELFPGEALAWARVAELQLSLGDLDGAAKAAQQAVALDPDLAR 384 Query: 357 --RKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDP 392 F L I + ++ Q A+ DP Sbjct: 385 TQTVRGFAELTAI------DIEEAKASFQRAIELDPADP 417 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 75/251 (29%), Gaps = 16/251 (6%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + Y L L+ + I AR Q H L+ IALA+ + A Sbjct: 245 REASYFTLQAALL-LVVGRIDEARPNIQRALQLDPDHGTAYA--LQAIIALAQNRKEDAL 301 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 ++ +L + ++ A ++A +A ++ P V + + Sbjct: 302 RLARQGAKLDPQSSIPQIALSYVYQGRFNIEQALQHAQQATELFPGEALAWARVAELQLS 361 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + A Q + R + + R D+ + +++L Sbjct: 362 LGDLDGAAKAAQQAVALDPDLARTQTV----RGFAELTAIDIEEAKASFQRAIELDPADP 417 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT------HLLSENTVGKLKRA 314 ++ + + I Q + +E ++P+ + Y E +L A Sbjct: 418 LSRLGLGLAKIRQGDLKAGTEEIEIAASLDPNNSLIRSYLGKAYYDQKRGEAAATELAIA 477 Query: 315 LRLEEINKESV 325 L + Sbjct: 478 KEL---DPNDP 485 >gi|30019667|ref|NP_831298.1| TPR repeat-containing protein [Bacillus cereus ATCC 14579] gi|206970613|ref|ZP_03231565.1| TPR domain protein [Bacillus cereus AH1134] gi|218235224|ref|YP_002366300.1| TPR domain protein [Bacillus cereus B4264] gi|228920329|ref|ZP_04083676.1| hypothetical protein bthur0011_13440 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228957894|ref|ZP_04119634.1| hypothetical protein bthur0005_14070 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229144217|ref|ZP_04272631.1| hypothetical protein bcere0012_13800 [Bacillus cereus BDRD-ST24] gi|296502188|ref|YP_003663888.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171] gi|29895211|gb|AAP08499.1| TPR-repeat-containing protein [Bacillus cereus ATCC 14579] gi|206734249|gb|EDZ51419.1| TPR domain protein [Bacillus cereus AH1134] gi|218163181|gb|ACK63173.1| tetratricopeptide repeat protein [Bacillus cereus B4264] gi|228639225|gb|EEK95641.1| hypothetical protein bcere0012_13800 [Bacillus cereus BDRD-ST24] gi|228801810|gb|EEM48687.1| hypothetical protein bthur0005_14070 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228839352|gb|EEM84646.1| hypothetical protein bthur0011_13440 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296323240|gb|ADH06168.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171] Length = 420 Score = 50.7 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 294 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 295 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 336 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 337 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 367 >gi|332299919|ref|YP_004441840.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas asaccharolytica DSM 20707] gi|332176982|gb|AEE12672.1| Tetratricopeptide TPR_2 repeat-containing protein [Porphyromonas asaccharolytica DSM 20707] Length = 659 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 20/195 (10%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A A ++Q+H E Y L +IAL + A ++ L I + Sbjct: 142 GAEQYERADSAALALTQRH--PKEARGYFLAAEIALRRQDTVAAEGRIAEGLAIDSLSAA 199 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAI 208 L + GD A RY K+++ P + + +++++A+ Sbjct: 200 PYRMLSTIAYLRGDYEGALRYHDKSIEQEPGQASDYINRGLTRYKLKEYRGAMEDYNQAL 259 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + A+ R+L + GD+ + D +E ++L ++ A A Sbjct: 260 LL-----------TPHDAVARHNRALLRIEVGDLQGAREDLLEVVRLQPTNLTAHFNLAL 308 Query: 269 SLISQNKKRKAEVIL 283 + R+A L Sbjct: 309 VQTQTGQYREAIETL 323 >gi|82545894|ref|YP_409841.1| oxidoreductase subunit [Shigella boydii Sb227] gi|81247305|gb|ABB68013.1| putative oxidoreductase subunit [Shigella boydii Sb227] gi|320183460|gb|EFW58309.1| Cellulose synthase operon protein C [Shigella flexneri CDC 796-83] gi|332089547|gb|EGI94651.1| cellulose synthase operon protein C [Shigella boydii 3594-74] Length = 1053 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 104/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 248 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 305 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 306 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 365 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 366 ALENQGKWAPAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 425 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 426 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 482 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + + +++ Sbjct: 483 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLT-LEPTNADAI 536 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 537 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 588 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L + T A+ L Sbjct: 480 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTLEPTNADAILGL 539 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 540 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 599 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 600 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 634 Score = 36.8 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 153 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 207 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 208 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 267 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 268 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 311 >gi|262193489|ref|YP_003264698.1| hypotheticalprotein [Haliangium ochraceum DSM 14365] gi|262076836|gb|ACY12805.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365] Length = 963 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 79/236 (33%), Gaps = 14/236 (5%) Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L + A +A+ I P A + ++ A+ + + Sbjct: 197 GLLYLAQAARYRESFQEANDVFREAVGIDPQLLEANLAWGDMGLEK--YAVALAEQSYDE 254 Query: 216 KNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + N A + ++ D+ A++ ++L + + + A I QN Sbjct: 255 VLKIDPNHPDA--HSGMARVKLEQSYDLAAAFDHLEKALASNPRHLRSLLVRASLEIDQN 312 Query: 275 KKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + A+ L +++ VNP + L ++ + +R L N I Sbjct: 313 QWDAAQATLAEVFAVNPMNFEGRALLATVHWLRDDSAAYEAERERVLAA-NPGYAAFYHI 371 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--NSHNTDKILYWTQS 384 V++ A+ +A A A+++ P + + + ++ L W + Sbjct: 372 VARSAVREHRYREAIALEEQAVELDPDYHEA--MQALGTGYLRLGDEERGLRWMRK 425 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 10/183 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVV 195 +A + + +L+I A + DL +A + KAL +P Sbjct: 246 ALAEQSYDEVLKIDPNHPDAHSGMARVKLEQSYDLAAAFDHLEKALASNPRHLRSLLVRA 305 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + +W A L + RA+L L + D A + + Sbjct: 306 SLEIDQNQWDAAQATLAEVFAVNPMNFEGRALLATVHWLRD-DSAAYEAERERVLAAN-- 362 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIANIYTHLLSENTVGK 310 A+S + +++ R+A + E+ +++P H + Y L E + Sbjct: 363 -PGYAAFYHIVARSAVREHRYREAIALEEQAVELDPDYHEAMQALGTGYLRLGDEERGLR 421 Query: 311 LKR 313 R Sbjct: 422 WMR 424 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 51/141 (36%), Gaps = 12/141 (8%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L+ + + + E++ + + A++ + ++ A + Sbjct: 193 KDAPGLLYLAQAARYRESFQEANDVFREAVGIDPQLLEANL----AWGDMGLEKYAVALA 248 Query: 284 EKIW----KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSKIA 335 E+ + K++P HP+ + + E + LE+ N + SL++ + + Sbjct: 249 EQSYDEVLKIDPNHPDAHSGMARVKLEQSYDLAAAFDHLEKALASNPRHLRSLLVRASLE 308 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 ++ D A A + P Sbjct: 309 IDQNQWDAAQATLAEVFAVNP 329 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 17/201 (8%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNR 225 GD A + A +AL++ P + + ++ A+ + + ++ Sbjct: 725 QGDAPGALQAAGRALELMPAHHLALYVSAEVALRQRDVDTALEHFRALIRAGGDSFDVRG 784 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +IAR ++ D+ + + +L + +A LE Sbjct: 785 RLGMIARLQDDLDE-----AIRQLCAAKRLDPERSYPYSELYDVYKEAGRMDEALAELET 839 Query: 286 -----IWKVNPHPEIANIYTHLLSENTVGKLKRA--LRLEEINKESVESLVIVSKIALEM 338 + P E+ Y + V R IN E +++ + LE Sbjct: 840 YVMLEQMQYGPLRELVGAYAERARWDKV----RVYGEMAVHINPSDAELFLMLGQAYLET 895 Query: 339 GSIDQAHAKAMLAMKIAPRKE 359 G QA A+ P Sbjct: 896 GDPAQALFTFDSALLAKPALR 916 >gi|189426262|ref|YP_001953439.1| hypothetical protein Glov_3213 [Geobacter lovleyi SZ] gi|189422521|gb|ACD96919.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 639 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 6/197 (3%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + N A + YV ++L +I + + N+A E + +L++ Sbjct: 386 LGRGNTQEA--VEQYVEFLKLKPESADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNP 443 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A L G + A + TKAL++ + A+V YV K++ L + Sbjct: 444 EANRELAAVYRAKGATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEA 503 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + A L K + + ++ +L + A + + Sbjct: 504 VELAPD----DANNHYKLGLIYDFKKEYDNAIASYKKAAELKPDHARALHALGRVYMKTG 559 Query: 275 KKRKAEVILEKIWKVNP 291 + +A LE K +P Sbjct: 560 RLSEAREALEAARKADP 576 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 27/271 (9%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATRE----FAV 157 A + + + ++ A + A + + P + Sbjct: 48 AARTKDEAQILSSCPDGAAAQFVQGLQAERSGNIDGAIAGYRRALQKEPGLAVASGNLGL 107 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 LY + D A K + P P +A+ + K ++ A+ + Sbjct: 108 --LYLQKGLQDDAAVALT---KGIAGQP-LPAYHKALGKIMTDRKFYALALYHYGEASAK 161 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A +L ++ A +G + + +L L + AS+ A + QN++ Sbjct: 162 LPA----DAAVLAGQAEVYAAQGQTDRAVDEFRRALLLDPSHEQASLALAGIYLQQNQQE 217 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRAL-----RLEEINKESVES 327 A +L+K NP H +A+IY + + +R L + E E Sbjct: 218 AALNLLKKASTANPRSSSLHLMLADIY-EKNGDAKQAEYERLLGGKKVVVTEELPARAEG 276 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +V+ ++A G +D+A +K P Sbjct: 277 VVLGDQLA-AKGEVDKAAEAYRAVLKQQPDA 306 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 37/301 (12%), Positives = 87/301 (28%), Gaps = 47/301 (15%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A + A + + V +Q E L L + + A + ++ Sbjct: 284 AAKGEVDKAAEAYRAVLKQQPDAIEPLEKL--GALYFRAGRDGDALLAYRDATHLGSSNP 341 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 Y+L + L+ A +A++ P + + A+ + Sbjct: 342 EVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKLADIRLGRGNTQEAVEQYVEF 401 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K E A + + + ++ + LKL ++ A+ A ++ Sbjct: 402 LKLKPES----ADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNPEANRELAAVYRAKG 457 Query: 275 KKRKA----------------------------------EVILEKIWKVNP-----HPEI 295 KA +L++ ++ P H ++ Sbjct: 458 ATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEAVELAPDDANNHYKL 517 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 IY + + + E+ + +L + ++ ++ G + +A A K Sbjct: 518 GLIYDFKKEYDNA--IASYKKAAELKPDHARALHALGRVYMKTGRLSEAREALEAARKAD 575 Query: 356 P 356 P Sbjct: 576 P 576 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 114/368 (30%), Gaps = 67/368 (18%) Query: 75 MLHKRNYDKGYKALYTGLM-------SIAAHNIPLARKMHSYVS---QQHTFHNEYLVYL 124 L K D AL G+ A I RK ++ + + + Sbjct: 109 YLQKGLQDDAAVALTKGIAGQPLPAYHKALGKIMTDRKFYALALYHYGEASAKLPADAAV 168 Query: 125 LEVQI--ALAERQYNIAHEKLE-MMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATK 179 L Q A+ Q + A ++ +L P A+ +Y + +A K Sbjct: 169 LAGQAEVYAAQGQTDRAVDEFRRALLLDPSHEQASLALAGIYLQ---QNQQEAALNLLKK 225 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAI--TFLNQKKKNAKEWNRNRAILLIARSLENA 237 A +P + + + Y + +A L KK E RA ++ + A Sbjct: 226 ASTANPRSSSLHLMLADIYEKNGDAKQAEYERLLGGKKVVVTEELPARAEGVVLGD-QLA 284 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH----- 292 KG++ + LK ++I R + +L ++ H Sbjct: 285 AKGEVDKAAEAYRAVLKQQPDAIEPLEKLGALYFRAG--RDGDALL--AYRDATHLGSSN 340 Query: 293 PE----IANIY----------------THLLSENTVGKLKRAL----------------R 316 PE + +Y +LK A Sbjct: 341 PEVYYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEARLKLADIRLGRGNTQEAVEQYVE 400 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375 ++ ES + + +++I ++ +++ A +K+AP E LA + +A Sbjct: 401 FLKLKPESADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNPEANRELAAVYRAKGATD 460 Query: 376 DKILYWTQ 383 + ++T+ Sbjct: 461 KAVEHYTK 468 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 81/232 (34%), Gaps = 17/232 (7%) Query: 134 RQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + + A E +L+ + +LYF + R GD A A + P V Sbjct: 287 GEVDKAAEAYRAVLKQQPDAIEPLEKLGALYFRAGRDGDALLAY---RDATHLGSSNPEV 343 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + Y + A+ + + + R + + +G+ + + Sbjct: 344 YYNLGLLYEKRNQLDEAVVAYKRAIEKRPAYAEAR----LKLADIRLGRGNTQEAVEQYV 399 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305 E LKL S + A+ + AE + + K+ P + E+A +Y Sbjct: 400 EFLKLKPESADIHLKLARIFVKNKNLNLAEESYKAVLKLAPDNPEANRELAAVYRA--KG 457 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 T ++ + E+ +E ES + I ++ D+ A+++AP Sbjct: 458 ATDKAVEHYTKALELQEEDNESRNALVAIYVKDKKYDELAELLQEAVELAPD 509 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 69/219 (31%), Gaps = 43/219 (19%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 V L ++ R G+++ A +AL P + + Y+ A L + Sbjct: 70 VQGL--QAERSGNIDGAIAGYRRALQKEPGLAVASGNLGLLYLQKGLQDDAAVALTKGIA 127 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQN 274 ++A+ D+ + + E+ A++ A A+ +Q Sbjct: 128 GQPLPAYHKAL-----GKIMTDRKFYALALYHYGEASAKLP--ADAAVLAGQAEVYAAQG 180 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + +A V + +RAL L + ++ + ++ I Sbjct: 181 QTDRA----------------------------VDEFRRALLL---DPSHEQASLALAGI 209 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANS 372 L+ + A A PR L+ A I + N Sbjct: 210 YLQQNQQEAALNLLKKASTANPRSSSLHLMLADIYEKNG 248 >gi|46201014|ref|ZP_00207931.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 540 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 84/274 (30%), Gaps = 12/274 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQI 149 GL+++ A + + N+ + L + A +N A + Sbjct: 51 GLIALGQGQARRAAEHLTQAVAAD--PNQAVPRLALGRALEALDNHNSAILHYRAILAAD 108 Query: 150 PATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P E L R+G + A YA +A+ P P + E +A Sbjct: 109 PNHAEANAR-LAELLGRLGRNRTEALEYAQRAVASDPRHPEALCTLGTLLHQTGEHVQAA 167 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + +W A+ L L + G + + L + A Sbjct: 168 HVLERSLALRPDW----AVALNNYGLVLSALGQYDRAVAVLSGAADLRRDHAGTRANLAA 223 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESV 325 +L + A V E+ K+N + L+ R + +V Sbjct: 224 ALRGMGRLDDARVHAERATKLNSRDVSGWLELGLIRKALGMPEAAAAAFERAVTADPNAV 283 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + +++ LE+G D+A +++ P Sbjct: 284 HAHYCLAEARLELGQKDRAAKNFRRCLELDPEDR 317 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 6/141 (4%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R+++ D G+ + A ++ A + Q + R+A L + Sbjct: 13 AFGRAMQAWDDGNAAEARRLARSIIETKPEFGGAHYLLGLIALGQGQARRAAEHLTQAVA 72 Query: 289 VNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG-SIDQA 344 +P+ P +A +N + + + E+ ++++ +G + +A Sbjct: 73 ADPNQAVPRLALGRALEALDNHNSAILHYRAILAADPNHAEANARLAELLGRLGRNRTEA 132 Query: 345 HAKAMLAMKIAPR--KEIFLL 363 A A+ PR + + L Sbjct: 133 LEYAQRAVASDPRHPEALCTL 153 >gi|258592074|emb|CBE68379.1| TPR repeat protein precursor [NC10 bacterium 'Dutch sediment'] Length = 1220 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 44/326 (13%), Positives = 93/326 (28%), Gaps = 43/326 (13%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 ++ A +++ AR+ L L Sbjct: 234 RLVDAERRAASRLADSESTVTLGEILFDLGKPVEARRGFEKALTLDPGSPRALTGL--GW 291 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + L E + A P T A+ R+ + + +A P +P Sbjct: 292 VYLVEGRTEEALRTFRQ--ATPPT-LSALMGQANALYRLNRFDEMEEVVAEAKSRFPSSP 348 Query: 189 WVTEAVVQQYVLAKEWSRAITFLN------------------------------QKKKNA 218 Y++ +A+ L Q A Sbjct: 349 QPPTQTALLYLIQGRVGKALQELEHAVALDPGYAPAHGLRSNIALVRNEKGVAQQAALQA 408 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 N + A + SL + + + A ++L+L ++ +A I ++ L + + Sbjct: 409 ILANPSSASAYLDLSLVKQAEFRLEEALQAARKALELEPDNPVAMIQVSRLLFGLGRLSE 468 Query: 279 AEVILEKIWKVNPH-PEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A ++E+ + PH P I + + L L + E + E + Sbjct: 469 ALSLVEEARQRAPHDPLITSTWGFLMLTQGKVQEALSAFGQAIEQDSTRGEPHLGRGLAL 528 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIF 361 ++A + +A + P+ +F Sbjct: 529 FRQNKTEEAVQEMWMATLLEPKVALF 554 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 90/268 (33%), Gaps = 32/268 (11%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + + +T L+ +G A+R KAL + P +P + Sbjct: 237 DAERRAASRLADSESTVTLGEI-LF----DLGKPVEARRGFEKALTLDPGSPRALTGLGW 291 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y++ A+ Q A++ A +L ++ D + E+ Sbjct: 292 VYLVEGRTEEALRTFRQA-----TPPTLSALMGQANALYRLNRFDEME--EVVAEAKSRF 344 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE--IANIYTHLLSENTVGKLK 312 +S A + Q + KA LE ++P P + + + +E V + Sbjct: 345 PSSPQPPTQTALLYLIQGRVGKALQELEHAVALDPGYAPAHGLRSNIALVRNEKGVAQQA 404 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--------L 364 + N S + + +S + +++A A A+++ P + ++ L Sbjct: 405 ALQAILA-NPSSASAYLDLSLVKQAEFRLEEALQAARKALELEPDNPVAMIQVSRLLFGL 463 Query: 365 AQIEQANSHNTDKILYWTQSALHAMPDP 392 ++ +A S ++ A DP Sbjct: 464 GRLSEALSL-VEEARQ------RAPHDP 484 >gi|322419153|ref|YP_004198376.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18] gi|320125540|gb|ADW13100.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M18] Length = 881 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 91/283 (32%), Gaps = 12/283 (4%) Query: 96 AAHNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 A + +A+K + + + + N LL+V LA +Q + A E+ ++ + Sbjct: 602 AKGRLLMAQKNYKQALKVFDEVSALNPDRGALLKVGCYLAMKQGDKAVEQARRLIASHPS 661 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 L GD SA A +A+ + + + Y K+ + A++ Sbjct: 662 SVKGYLLLASIFQGGGDTTSAIAQANQAIRVDGKSVEARVLLGGLYRARKDNAAAMSAFQ 721 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + R + + + K + A Sbjct: 722 DALKVQPDSVPARFAVATLLEGTGKKQEAAARYRSILDLNGKYLPALNNLAYLCADGY-- 779 Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLV 329 +K +A + ++++P +P + + Y + + +K R + Sbjct: 780 -GRKEEALRLAISAFRLDPGNPSVTDTVGYALYKNGRSQEAVKVLERAATLLPGDPTVRY 838 Query: 330 IVSKIALEMGSIDQAHAKAM--LAMKIAPRKEIF-LLLAQIEQ 369 + + G +A LA+ P LLAQ+++ Sbjct: 839 HLGLAYHQAGDKARAQQALQDSLALGEYPDSAAARTLLAQLKR 881 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 38/291 (13%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + I+ N AR+ + ++ + + L L + LA + A +LQ Sbjct: 167 LHISMGNEDRARRALNELTGADPRNFKALYML--AMLELAAGNKDQAAAVYRKILQQDKN 224 Query: 153 REFA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL--AKEWSRA 207 + A + L E D + A+ A + + P +++ V + ++ A Sbjct: 225 QPAARFKLGGLLLEKK---DPDQAEAAADQLIKDYPQRGDGY--LLKGMVAYYRQNYTEA 279 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS---- 263 IT L Q K ++ + L S + A+ ++ + + AS Sbjct: 280 ITQLQQSIKLGPTLEAHQFLGLSYYSKGELE---------TALSQFRIILDRVPASRRAR 330 Query: 264 ICAAKSLISQ-------NKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRAL 315 + A+ L++Q N+ RK + E + H + Y + + +L RA Sbjct: 331 LMTAQILLAQKRVDDAVNEVRKVLALDEA--DASAHHLLGTAYMAQGQFDEGMRELDRAT 388 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 RL + + V + + G + ++ A+K +P LL Sbjct: 389 RL---DPKLVNAYLKKGAFYFSRGRETEGESELTTAVKASPDALNSRLLLA 436 >gi|168699185|ref|ZP_02731462.1| TPR repeat protein [Gemmata obscuriglobus UQM 2246] Length = 693 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 6/194 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + P A ++ H + L + L A + Sbjct: 18 GDHPEAERLAGQALAVDPGHADAHSLLGLAR--LQSGDRGAALPHWRAAAALRPDVAAHR 75 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L R+ D SA+ A +++P + S A+ ++ Sbjct: 76 YNLAELCRRLNDPVSAEPEFRAAAELAPQWAEAHFGLGNVLGDLGRVSEALAAYDRAVAL 135 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R L R ++G ++ + D +L + A + +L ++ Sbjct: 136 QPSFAR----ALYNRGNLLREEGRVVPAERDYRAALAADPDLTDARVNLGAALGELHRWS 191 Query: 278 KAEVILEKIWKVNP 291 +AE + + P Sbjct: 192 EAERCYREALERRP 205 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 63/237 (26%), Gaps = 21/237 (8%) Query: 134 RQYNIAHE-KLEMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + + P ++ L + GD +A + A + PD Sbjct: 18 GDHPEAERLAGQALAVDPGHADAHSLLGLAR--LQSGDRGAALPHWRAAAALRPDVAAHR 75 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + + A + A +W A D G + + Sbjct: 76 YNLAELCRRLNDPVSAEPEFRAAAELAPQW----AEAHFGLGNVLGDLGRVSEALAAYDR 131 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 ++ L + A L + + AE +P + T ++ Sbjct: 132 AVALQPSFARALYNRGNLLREEGRVVPAERDYRAALAADP-------------DLTDARV 178 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 L E+++ S + G D A A + E L+ E Sbjct: 179 NLGAALGELHRWSEAERCYREALERRPGDADLEAALAGAVLAQGRTAEAARLMEACE 235 >gi|58388836|ref|XP_316573.2| AGAP006535-PA [Anopheles gambiae str. PEST] gi|55239308|gb|EAA10847.3| AGAP006535-PA [Anopheles gambiae str. PEST] Length = 1170 Score = 50.3 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 71/249 (28%), Gaps = 53/249 (21%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q AL Y +A + + +P + E + G+ + A Sbjct: 603 AQAALDALNYQVARDAYVKVRNLP---WLELIGDLKERQKRGETSKEVLLA--------- 650 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 Y A ++ A + N+K + + + E +G Sbjct: 651 ---------DTYAFAGKYKEASRLYQKSGNNSKALAMYSDLRMFDLAQEFLKEGSAADRK 701 Query: 247 HDA-IESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHL-L 303 + C + AA+ L+S + +A I+ E+ W A++ + Sbjct: 702 ELIRRRAEWACSVHEPRA--AAELLLSAGEPERAIEIVAEQGW--------ADVLLDIGR 751 Query: 304 SENTVGK---------LKRALRLEEINKESVESLVIVSK------IALEMGSIDQAHAKA 348 + L+R L + E + + + +E +A A Sbjct: 752 RLAASERVPLELIASHLRRLKAL----PLAAEIYRKLGEEEQVVQLHVEARDWPEAFRLA 807 Query: 349 MLAMKIAPR 357 K+ P Sbjct: 808 EHLPKVLPS 816 >gi|225873374|ref|YP_002754833.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] gi|225791928|gb|ACO32018.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] Length = 402 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 90/298 (30%), Gaps = 23/298 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE----KLEMM 146 G++ + A + H L LL A + + Sbjct: 72 GVLLYFQGDYAGANQALGKALALH-PDIPKLQALL-GMSEERSGDPQHAVKDLAAAFPQL 129 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 E + SL L A + + P P + + Y Sbjct: 130 HDQKIQMEAGL-SLIHLYQAHDQLAEAAGIVRQLQALQPKNPQLIYVAYRLYS------- 181 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 ++ + + A + A + E++ + + A+ ++L + A Sbjct: 182 --DLAGEQLLSLSLVAPDSAQMHAAMAYEDSMQNNNQAAIAQYRKALAIDPKLPGAEFSL 239 Query: 267 AKSLISQNKKRK---AEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEI 320 A+ L + N ++ A I E+ + NP+ E +A +L N R +I Sbjct: 240 AQLLQNANDVKQQQEAASIYEQALRENPYDEPSALALGDMNLTQGNFKIAQTYYERALKI 299 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 + E E+ ++K + QA ++++ P LA + + D Sbjct: 300 DPEDAEANFGLAKALIGNNESKQALPYLEKSIRLDPTNASAHFRLATLYRQEGREQDA 357 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 13/164 (7%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS---RAITFLNQKKKNAKEWNR 223 + +A KAL I P P ++ Q A + A + Q + ++ Sbjct: 212 QNNNQAAIAQYRKALAIDPKLPGAEFSLAQLLQNANDVKQQQEAASIYEQALRENP-YDE 270 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ L N +G+ + +LK+ A+ AK+LI N+ ++A L Sbjct: 271 PSALALGDM---NLTQGNFKIAQTYYERALKIDPEDAEANFGLAKALIGNNESKQALPYL 327 Query: 284 EKIWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEIN 321 EK +++P H +A +Y ++ +L+ RL ++ Sbjct: 328 EKSIRLDPTNASAHFRLATLYRQEGREQDARQQLQIFQRLRKLK 371 >gi|224826392|ref|ZP_03699494.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gi|224601493|gb|EEG07674.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 388 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 21/208 (10%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL ++ + A K + V++Q E L ++ + + A + ML+ Sbjct: 44 RGLDALVEEDSGAAVKALAEVARQQPAVQELPLTL---GKLYRKRGENDRAIRLHQRMLE 100 Query: 149 --------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 A R L + + G ++ A+ K L + ++ Y Sbjct: 101 STDLPSEQRDAVRFE----LAQDFRKAGLVDRAEEILLKLLSGNMGRS-ARRQLLDIYQQ 155 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 ++W +AI + + +A + A + K + + E+L + Sbjct: 156 DRDWEKAIATAKELRSDAHSYQHEVAQYHCELAQGELYKSNYPEARRHVTEALAANRKCV 215 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWK 288 AS+ ++ + +A W+ Sbjct: 216 RASLILGDIEFAEGRLEEA----IAAWQ 239 Score = 36.5 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 64/227 (28%), Gaps = 35/227 (15%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L ++ D +A + + P + + + Y E RAI + ++ Sbjct: 44 RGL--DALVEEDSGAAVKALAEVARQQPAVQELPLTLGKLYRKRGENDRAIRLHQRMLES 101 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R + + + G + + ++ L+S N R Sbjct: 102 TDLPSEQRDAVRFELAQDFRKAGLVDRAEEILLK------------------LLSGNMGR 143 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLE-EINKESVESLVIVSKIA 335 A ++ +IY E + K E + +++ Sbjct: 144 SARR------------QLLDIYQQDRDWEKAIATAKELRSDAHSYQHEVAQYHCELAQGE 191 Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYW 381 L + +A A+ L+L IE A + I W Sbjct: 192 LYKSNYPEARRHVTEALAANRKCVRASLILGDIEFAEGRLEEAIAAW 238 >gi|21231630|ref|NP_637547.1| tetratricopeptide repeat protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21113323|gb|AAM41471.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 392 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 27/303 (8%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI + ++ + + + + + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGLSKPDDALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + Y + Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKT 414 L + A + L + + +P + G + W P K Sbjct: 322 GESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQ--CPSCKE 379 Query: 415 LCY 417 Sbjct: 380 WGT 382 >gi|307545459|ref|YP_003897938.1| hypothetical protein HELO_2869 [Halomonas elongata DSM 2581] gi|307217483|emb|CBV42753.1| hypothetical protein HELO_2869 [Halomonas elongata DSM 2581] Length = 393 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 190 VTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +V EW A+ L + ++ R A L + + + + Sbjct: 148 AKRLLVDLLEREGEWQAALDVALPSLVRQHEDIRRAAAHWLCELADQERHSASPVLARRH 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ++L + A++ A+ + + R A L +I P+ + + + Sbjct: 208 LKQALSTDGRCVRANLLLAEMALDTGQYRPAIRFLSRI------PDQDKAFVPTM----L 257 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 L RA RL E+ +I + + AP + +LLA+ Sbjct: 258 EPLSRAYRLL-----DDETGLI---------------RQLESLLDQAPYTSVIILLAESL 297 Query: 369 QANSHNTDKILY 380 + + + L Sbjct: 298 RRHHGDAHAALE 309 >gi|330819860|ref|YP_004348722.1| TPR repeat-containing protein [Burkholderia gladioli BSR3] gi|327371855|gb|AEA63210.1| TPR repeat-containing protein [Burkholderia gladioli BSR3] Length = 426 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 84/274 (30%), Gaps = 39/274 (14%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRN 224 G L A + +++AL++ P + W + + + A+ + +AK Sbjct: 58 RGRLEVANQASSRALELDPHSGWAFVEKSRVLLAQGDVDGALGNFERAFDADHAKGKWMR 117 Query: 225 RAILLIARSLENADKGDMIASY------------------------HDAIESLK----LC 256 ++L+ + + G++ +Y AIE+ L Sbjct: 118 EWVMLLLKQHDYERAGEVALAYCENQPKRAQAWFILGYSLERGGYLSAAIEAYNRCRMLD 177 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKL 311 ++ A+ + A +E+ P I A IY Sbjct: 178 SRFRFVNVSLARVFLMMGDIPSASFRIEEAIADEPADSIAWFTQARIYQSRRQTEAAEIA 237 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 R + + ESL++ ++I E G +A+ A+++ EQ + Sbjct: 238 --IERALALAPDCPESLLLHAQILREAGRWSEANCLVERAIELVLTDGEIRFAQAWEQLS 295 Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSVW 405 + + W + + ++ W Sbjct: 296 TGDFG--RGWLDCEWRSHAGASRQCIERLPTARW 327 >gi|331685187|ref|ZP_08385773.1| cellulose synthase operon protein C [Escherichia coli H299] gi|331077558|gb|EGI48770.1| cellulose synthase operon protein C [Escherichia coli H299] Length = 1157 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 44/353 (12%), Positives = 106/353 (30%), Gaps = 69/353 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ ++ AV L + I D+ + + A +A Sbjct: 410 QTLRMDSSNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYV-------------------LAKEWSRAITFLNQKKKNAKEWN 222 + WV A +Q+ A + S+A L + K + Sbjct: 470 ALEKQGKWVQAAALQRQRLALAPGSVWITYRLSQDLWQAGQRSQA-DTLMRNLAQQKPND 528 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLIS 272 + + +A + + +L + + + A L Sbjct: 529 PEQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRE 585 Query: 273 QNKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVES 327 K+ +AE +L + P P ++ + + T + L + ++ Sbjct: 586 SGKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADA 639 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ ++++ + G A ++ + QA +T Sbjct: 640 ILGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPLAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 >gi|91976772|ref|YP_569431.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5] gi|91683228|gb|ABE39530.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5] Length = 664 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 1/104 (0%) Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 P +L R+GD A + +AL ++P P A+ Q Y+ EW Sbjct: 307 AFADTPDLASQGHKNLGTSFERLGDEKRAVEHYREALRMNPHLPEAHNALAQFYIRKGEW 366 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A+ L+Q A + R+ D G+ +++ + Sbjct: 367 KDALAHLDQAV-FTDPIRAKAAGVAGWRANALFDMGEGSSAFRE 409 >gi|257457326|ref|ZP_05622497.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] gi|257445248|gb|EEV20320.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] Length = 247 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 3/163 (1%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + A + + + +++ K + A A+ Sbjct: 23 TAAAGLFAKGNIDSETAKTYFEIAEAYTEVSKYDKAEEFYLKAAKDPAHKNAAEYNLARV 82 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVE 326 Q + KA+ ILE+ +K P + A Y+ + + +L + + E+ E Sbjct: 83 YGLQGEWTKAKPILERQYKEAPGNILILKAYSYSLAATGDEERACAMYKKLYDEDSENPE 142 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 S + ++I + D+A A +LA++E+ Sbjct: 143 SALNYARILILSKRYDEATALIEELKTRFTESTETRVLAELEE 185 >gi|240128947|ref|ZP_04741608.1| hypothetical protein NgonS_10057 [Neisseria gonorrhoeae SK-93-1035] gi|268687332|ref|ZP_06154194.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|268627616|gb|EEZ60016.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] Length = 389 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 47/350 (13%), Positives = 106/350 (30%), Gaps = 55/350 (15%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAK 268 + + + A + K + + A+E+ K C A++ Sbjct: 169 QLLSHDEQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKC---TRANMILGD 225 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANIYTH-LLSENTVGKL----KRALR 316 Q A + H ++ Y E + +L + Sbjct: 226 IEHRQGNFPAAVEAY-AAIEQQNHVYLSMVGEKLYEAYAAQGKPEEGLNRLTGYMQTFPE 284 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQAN 371 L+ IN +SL++ + +A A+ ++ P ++ L L+ ++ A Sbjct: 285 LDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDPAW 336 Query: 372 SHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + D + L ++ + + S W P F Sbjct: 337 KADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|169622878|ref|XP_001804847.1| hypothetical protein SNOG_14664 [Phaeosphaeria nodorum SN15] gi|160704871|gb|EAT77856.2| hypothetical protein SNOG_14664 [Phaeosphaeria nodorum SN15] Length = 692 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 25/218 (11%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQYV--- 199 Q P LY + G+ + A ++ +AL PD + + +++ Sbjct: 369 QDPDALVLRGRILYAQ----GENDKALQHFRQALSCDPDFKAAVKYLRMVQKLERMKSEG 424 Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 A + A+ + + +L R+L N+ A+ D ++L+L Sbjct: 425 NASFKAGRYQEAVNTYTEALAVDPLNKNTNSKILQNRALCNSRLKQWKAAVADCDKALEL 484 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRA 314 + A AK+L +A L+ +++ NP P +A E K K Sbjct: 485 DPSYTKARKTRAKALGESGNWEEAVRELKAMYEANPSEPGLAKEIRDAELELKKSKRKDY 544 Query: 315 LRLEEINKESVESLVIVS--KIALEM------GSIDQA 344 ++ + K+ E+ V + K+A+ G D A Sbjct: 545 YKILGLEKDCTETEVKKAYRKLAIVHHPDKNPGDEDAA 582 >gi|319787164|ref|YP_004146639.1| transglutaminase [Pseudoxanthomonas suwonensis 11-1] gi|317465676|gb|ADV27408.1| transglutaminase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 382 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 45/148 (30%), Gaps = 3/148 (2%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + R A R E GD+ + + + + A + Sbjct: 176 RRIDDTRALAHFRNNRGAELMAAGDLGGARAQLDAATEADPGFVPAWNNLGVLEMRAGNI 235 Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVESLVIVSK 333 A L W + P H + L + + RLE++ + + +++ Sbjct: 236 EAATRALRTAWSLAPEHTATLSNLVKLYERSGQSREAADFVARLEQVRRNDPFAQFVLAL 295 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 E G+ A A+++ R+ F Sbjct: 296 GCEETGNYACAVTHYRNAIRLQARQHAF 323 >gi|108759512|ref|YP_630186.1| TPR domain-containing protein [Myxococcus xanthus DK 1622] gi|108463392|gb|ABF88577.1| TPR domain protein [Myxococcus xanthus DK 1622] Length = 1426 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 102/376 (27%), Gaps = 83/376 (22%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER------------ 134 AL G + AR + + E + +L A Sbjct: 1000 ALVRGAAYARLGDWKKARAELARTRVNDRYPPEAVSWLALADAAEGNGAQARELLEKALH 1059 Query: 135 ---------------------QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 Y+ A E + P E A SL G + A Sbjct: 1060 AAKRPRNDMRLALGQLYWRERAYDKAQALFEEAQKDPRDYEAAC-SLGRLMLSRGLPDMA 1118 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + T+A++ + +A+ + + A+ + A + Sbjct: 1119 LKPLTQAVERNGAHGEARDALGRTLLALGRTQDALKQFEAWQLENPGS----AAAHKGFA 1174 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L G + S+KL + A A L R LE+ K++P Sbjct: 1175 LALFHSGRRKDAEGAVQRSVKLASDDAEAHKLRAAILFGAGDARGGFSALERANKLDPKD 1234 Query: 294 -----EIANIYTH----------------LLSENTVGKL---------------KRALRL 317 EIA + ++T G++ + L Sbjct: 1235 AGTFCEIALAFMRQGNSGNAEAAFAAARREGPDDTCGRVGELYAQLPGGGRGAARTLEDL 1294 Query: 318 EEINK---ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQIEQAN 371 + + +++ L G++ A A A+++AP R ++ L + + Q Sbjct: 1295 AARAPTVWDKAFARATMARALLGAGAVKDARTAADEAVRLAPFDGRAQLALGMVALRQKQ 1354 Query: 372 SHNTDKILYWTQSALH 387 D + A+ Sbjct: 1355 ---EDVARAALEKAVE 1367 >gi|40063048|gb|AAR37904.1| TPR domain protein [uncultured marine bacterium 560] Length = 732 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 82/250 (32%), Gaps = 13/250 (5%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNS 172 F NE L+Y + Q ++A + E + P E Y+L +G L++ Sbjct: 35 KDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVN-YNLGLTFQELGQLDA 93 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + L ++P+ + ++ A+ + ++ A + Sbjct: 94 AVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDY--AEAHNNLGN 151 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 +L+ G + + +++ + + +L + +A E+ + P Sbjct: 152 ALKEL--GQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKCYEQAIAIKPD 209 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 H + L + +K + I + E+ + + +D+A Sbjct: 210 YAEAHNNLGISLRELGQVDAA--VKSYEKALAIKPDFAEAYYNRGNVLKGLKRLDEALVS 267 Query: 348 AMLAMKIAPR 357 A+ + P Sbjct: 268 LNRAIVLKPD 277 >gi|228951996|ref|ZP_04114092.1| hypothetical protein bthur0006_14080 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807673|gb|EEM54196.1| hypothetical protein bthur0006_14080 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 434 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++ LK + E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYI--------LKGQEK--------YEELIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|89110483|ref|AP_004263.1| cellulose synthase subunit [Escherichia coli str. K-12 substr. W3110] gi|170083040|ref|YP_001732360.1| cellulose synthase subunit [Escherichia coli str. K-12 substr. DH10B] gi|188494263|ref|ZP_03001533.1| cellulose synthase operon protein C [Escherichia coli 53638] gi|226524756|ref|YP_026226.4| cellulose synthase subunit [Escherichia coli str. K-12 substr. MG1655] gi|256025745|ref|ZP_05439610.1| cellulose synthase subunit BcsC [Escherichia sp. 4_1_40B] gi|300950867|ref|ZP_07164749.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|300955013|ref|ZP_07167423.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|301028212|ref|ZP_07191481.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] gi|301646046|ref|ZP_07245951.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|307140219|ref|ZP_07499575.1| cellulose synthase subunit BcsC [Escherichia coli H736] gi|331644240|ref|ZP_08345369.1| cellulose synthase operon protein C [Escherichia coli H736] gi|269849703|sp|P37650|BCSC_ECOLI RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|85676514|dbj|BAE77764.1| cellulose synthase subunit [Escherichia coli str. K12 substr. W3110] gi|169890875|gb|ACB04582.1| cellulose synthase subunit [Escherichia coli str. K-12 substr. DH10B] gi|188489462|gb|EDU64565.1| cellulose synthase operon protein C [Escherichia coli 53638] gi|226510983|gb|AAT48188.4| cellulose synthase subunit [Escherichia coli str. K-12 substr. MG1655] gi|260447455|gb|ACX37877.1| cellulose synthase operon C domain protein [Escherichia coli DH1] gi|299878698|gb|EFI86909.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] gi|300318055|gb|EFJ67839.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|300449843|gb|EFK13463.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|301075717|gb|EFK90523.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|315138106|dbj|BAJ45265.1| cellulose synthase subunit [Escherichia coli DH1] gi|331036534|gb|EGI08760.1| cellulose synthase operon protein C [Escherichia coli H736] Length = 1157 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|331005630|ref|ZP_08328999.1| HemY protein [gamma proteobacterium IMCC1989] gi|330420555|gb|EGG94852.1| HemY protein [gamma proteobacterium IMCC1989] Length = 414 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 120/399 (30%), Gaps = 49/399 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHY-PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M + + F ++ + I FI + + G+ + + + +L LF Sbjct: 1 MKKALIGFCIVLVAIAFFIYLIQQENSYFLLVLGDTSIEMNFWFAVGVLLLALFLVW--- 57 Query: 60 AVSRFFLSCPAMLFHMLHK---RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 ++ + K R+ K GL++ + LA K V Sbjct: 58 LCVTMINRSAKKVYAVHQKIIGRSEKKAQLKTTQGLIAFIEGDWSLAHK--KLVLSARHV 115 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSA 173 + + YL + A + A + L + P E A+ ++ A Sbjct: 116 SSPIINYLAAARCAYEVGEEQEALKLLHKAEKAPGNNELAI--SLTQARMQLSNKQYEQA 173 Query: 174 QRYATKALDISPDAPWVTEAVVQQYV----LAKEWSRAITFL----NQKKKNAKEWNRNR 225 ++A I+P + V+ +W L + +E Sbjct: 174 LATLSRAEKINP----AHKVVLSLQKSVYYALSDWPALKKLLPILHEKNIGTLEERYYLE 229 Query: 226 AILLIARSLENADKGDMI--ASYHDAIES--LKLCDNS---IMASICAAKSLISQNKKRK 278 L A +N +K + +E L + +LI N Sbjct: 230 QTLCQATVKDNIEKNSALSNEQRASLLEGCVNNLPAHFRKDSTILTLYINTLIELNAYDS 289 Query: 279 AEVILE--------KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A +L + W Y L + L +A + K S + Sbjct: 290 AAKVLARNINREWNESWVKQ--------YGLLNYSDAQAALVQAESWLKQEKNSAVLHLT 341 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 + ++ L+ +A + ++ I P E + LA++++ Sbjct: 342 LGRLCLQNKQWGRAKDFLLSSIAIKPLPESYAELARLQR 380 >gi|315618437|gb|EFU99024.1| cellulose synthase operon protein C [Escherichia coli 3431] Length = 1157 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|291567437|dbj|BAI89709.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 672 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 109/318 (34%), Gaps = 64/318 (20%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESCRIGDLNSAQRYATKALDIS 184 + ++ A L+I VY LY E D A AL ++ Sbjct: 50 AYQKQGEFEPALIAYTKALEIKP-DFGEVYGNLGSLYAEHKLWEDAVQAYDV---ALRLN 105 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMI 243 PD + + Q ++ ++ AI+ ++ AK+ + +A L+ +L N +K Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAIS--YCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAE 163 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------N 297 A+Y +E CD + L Q + A +K ++NP E+A Sbjct: 164 AAYQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNA 220 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E + ++A+ +IN + S + + + LE+G + +A A + A+++ P Sbjct: 221 WFRLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNPN 277 Query: 358 K----------------------------------------EIFLLLA-QIEQANSHNTD 376 ++ L + + + + D Sbjct: 278 SYWAHENLGDALSQNGCFSEAIPIYLQALQKVPEDKPGVSNSLYRQLGYAMREQSQADVD 337 Query: 377 KILYWTQSALHAMPDPLW 394 K W + PD W Sbjct: 338 KASQWLSEMISHPPDHNW 355 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 47/237 (19%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L ++ G+ A TKAL+I PD V + Y K W A+ + + Sbjct: 48 GLAYQKQ--GEFEPALIAYTKALEIKPDFGEVYGNLGSLYAEHKLWEDAVQAYDVALRLN 105 Query: 219 KEW--------------------------------NRNRAILLIARSLENADK-GDMIAS 245 + + +A L+ +L N +K A+ Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAEAA 165 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------NIY 299 Y +E CD + L Q + A +K ++NP E+A + Sbjct: 166 YQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNAWF 222 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E + ++A+ +IN + S + + + LE+G + +A A + A+++ P Sbjct: 223 RLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNP 276 >gi|291280328|ref|YP_003497163.1| tetratricopeptide repeat protein [Deferribacter desulfuricans SSM1] gi|290755030|dbj|BAI81407.1| tetratricopeptide repeat protein [Deferribacter desulfuricans SSM1] Length = 237 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 17/161 (10%) Query: 131 LAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Y A + LE L+ +Y+ DLN A + KA++++P Sbjct: 17 FLAGDYEKARQYLEKFLKYKDNFADVYNFLGF--IYYI---SNDLNRAIDFYEKAIELNP 71 Query: 186 DAPWVTEAVVQQYVLAKEWSRAIT---FLNQKKKNAKEWNRNR----AILLIARSLENAD 238 + Y E+ +A L + K +++ A + + + Sbjct: 72 YYTEALMNITVIYHSIGEYEKAEKYFKMLKENKNIKGIADKHCIGKLANIHAELAKKYLS 131 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + ++LKL + A +L NK +A Sbjct: 132 LFMYDEALEEYEKALKLAPEFPDIRLAYANALRDANKLEEA 172 >gi|296812797|ref|XP_002846736.1| bimA [Arthroderma otae CBS 113480] gi|238841992|gb|EEQ31654.1| bimA [Arthroderma otae CBS 113480] Length = 805 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 17/202 (8%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDA--P 188 + ++ A + + Q+ R Y+L E + + A A++ P Sbjct: 592 LQGDHDQALKCFKRATQLDP-RFAYGYTLQGHEYMSNEEYDKALDAYRHAINADPRHYSA 650 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W V + + F Q + A N +L+ + L + ++ A+ Sbjct: 651 WYGLGKVYER------MGKLKFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQ 704 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLL 303 + L S++A + A++L+ N+ A +L+ + P H + +Y + Sbjct: 705 YSRASSLSPQSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMMQ 764 Query: 304 SENTVGKLKRALRLEEINKESV 325 + +K ++ ++ Sbjct: 765 DKGNA--IKHFTTALNLDPKAA 784 >gi|254282132|ref|ZP_04957100.1| TPR domain protein [gamma proteobacterium NOR51-B] gi|219678335|gb|EED34684.1| TPR domain protein [gamma proteobacterium NOR51-B] Length = 750 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 5/121 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD + A++ KAL+I+P + + + A L + + + Sbjct: 590 RDRGDNSLAEQQLRKALEINPHLQAASLNLAELLRQTGRADEAQKLLEGQLDESAPAPFH 649 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+ L+A +G + + +L + + A +L + KA LE Sbjct: 650 HALGLMA-----VRQGRTSEALEHLETAARLDSDDVNYRYVYAIALNDTGEPDKAIAELE 704 Query: 285 K 285 Sbjct: 705 S 705 >gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 988 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 4/175 (2%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 ++ +Y+ A + LQ A R G+ + A +AL + P + Sbjct: 547 QSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAA 606 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 E+ RAI L+Q + + R + KGD+ + D Sbjct: 607 FNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYH----RGMAFRHKGDLDRALADLN 662 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 E+++L A + ++ + +A L + ++ P E + + E Sbjct: 663 EAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRGE 717 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 8/165 (4%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++R+Y+ A + + + L F+S G+ + A +AL + P Sbjct: 205 AFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSK--GEHDRAIADFDQALRLDPK 262 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + E+ RAI +Q ++ AR+ K D + Sbjct: 263 YTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKY----TFAYTARAFAFQSKRDYDRAL 318 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D ++L+L S+ A S+ +A ++ +++P Sbjct: 319 ADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDP 363 >gi|121715232|ref|XP_001275225.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus clavatus NRRL 1] gi|119403382|gb|EAW13799.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus clavatus NRRL 1] Length = 939 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G+++ A+R +A + + Sbjct: 579 AADLERNHGTKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQN 637 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240 P+ + A V+ A + +A L+ ++ A + R L N D+ Sbjct: 638 PNNEDIWLAAVKLEADADQTDQARELLSTARREAGTDRVWIKSVAFERQLGNIDEALDLV 697 Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + C S+ + A++ Sbjct: 698 NQGLQLYPKADKLWMMKGQIYEIQNKYPQAREAYSTGTRACPKSVPLWLLASRLEEKAGA 757 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E + +A L +E S ++ S+ Sbjct: 758 VVKARSVLDRARLAV--PKSAELWTESVRVERRANNIGQAKVLMAKALQEVPNSGLLWSE 815 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + +A + K+ +F+ +A+I +K + W + A+ + D Sbjct: 816 SIWYLEPRAQRKARS-LEAIKKVDNDPTLFITVARIFWGERR-LEKAMTWFEKAIVSDSD 873 >gi|289647679|ref|ZP_06479022.1| cellulose synthase operon protein C [Pseudomonas syringae pv. aesculi str. 2250] Length = 1298 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 60/295 (20%) Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156 A + ++ N L L + + A+ Q A L + + P R Sbjct: 334 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213 L + G L++AQ + L P ++ + A+ L+ Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + R +A+ + +GD+ A+ +++K +++ A+ + Sbjct: 450 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509 Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298 ++ KA V+++++ K P P++ + Sbjct: 510 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569 Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + L RL+ + S E + ++ ++ Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDADE 624 >gi|209920990|ref|YP_002295074.1| cellulose synthase subunit BcsC [Escherichia coli SE11] gi|209914249|dbj|BAG79323.1| putative cellulose synthase [Escherichia coli SE11] gi|324021167|gb|EGB90386.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3] Length = 1157 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQHKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|86131164|ref|ZP_01049763.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85818575|gb|EAQ39735.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 460 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 21/193 (10%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +A + K L++ P+ V EA+ + Y +++ A + ++ + A + Sbjct: 100 EAALDF-NKFLELEPNNEDVLEALYEVYFQQRDYDAAEATVKNLINFDVQYKEDLARIYT 158 Query: 231 A-----RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +L+ D+ D + LK + + + +EK Sbjct: 159 STKRYNEALDLIDELDEEIGTDIYRDRLKN------------RLYLLSGDTSRQVKAIEK 206 Query: 286 IWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 NP E + I + NT + AL L+++N + E + + K L ID Sbjct: 207 NIASNPKSEAEYLKLILLYSEQGNTQKAYETALELQKVNPYADEVHLALYKFNLNDNKID 266 Query: 343 QAHAKAMLAMKIA 355 +A + ++ Sbjct: 267 EAISSMQKVLEST 279 >gi|194335759|ref|YP_002017553.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308236|gb|ACF42936.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme BU-1] Length = 4489 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 83/275 (30%), Gaps = 39/275 (14%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 + + L + + + A +L + A L + + + A Sbjct: 30 DAPVARLQAALTFHQQGRLDEAEAVYREILVTEPDQFDAFRLLAIIAAQRKQFHEAIALF 89 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR 232 +A +I+ + K ++ A+ ++ ++ NR + ++ R Sbjct: 90 ERAFEINSEHANSLNNYGIVLCEVKRYNDAVLSFDKAIALNPDYGEAALNREAVLKILKR 149 Query: 233 ----------------SLENADKGDMIASYHDAIE-------SLKLCDNSIMASICAAKS 269 + +D G+++ E +L L + + + + Sbjct: 150 YDEVVLSCGLAFKGNNAAVCSDYGNVLQELSRYEESLLYYDRALALEPDYV--AAYFNRG 207 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEEINK 322 L + KR E +L + P+ A H N + +LKR R + Sbjct: 208 LALKKLKRYDEAVLSYDKAIALEPDYAEA--HSNRGNALTELKRYHDAVLSYDRALALKP 265 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ E+ D+A A+ P Sbjct: 266 DYAKAHANRGVALQELKQYDEAVLSYGRALACKPD 300 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 75/248 (30%), Gaps = 16/248 (6%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + L + + A +L+ A+ L + + + A+ +AL Sbjct: 3666 IRLHSALALHQQGCLDDAEVLYREILRANPEHFDALRLLATVAAQRKNFPEAEELFDQAL 3725 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 I+P V K + A+ + + ++ A R L Sbjct: 3726 KINPAHATVWNNRGIALQELKRYDEALQCYDNALERKADY----AAAFFYRGLVLTKLHR 3781 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +L L + A +L N+ +A V +K+ + P + Sbjct: 3782 YDEAVLSYNRALILKPDYAAACYNLGNTLQKLNRYDEALVCYDKVLVIKP----GDAEAC 3837 Query: 302 LLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 T+ +L+R + + + ++ + + ++ +A + I Sbjct: 3838 SNRGITLKELQRYDEAVLSYEKALALRPDYADAYYNLGNVLQDLKRYREALDNYDKVLAI 3897 Query: 355 AP-RKEIF 361 P ++ Sbjct: 3898 RPGDAHVY 3905 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 59/199 (29%), Gaps = 15/199 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G L+ A+ + + +PD + + + + A+ + + Sbjct: 1596 QQGCLDDAEVLYREVVHSNPDYFEAVQLLATVAAQKQSFHEALELFDHALAIKPD----H 1651 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 I L R + + L + A A +L + +A EK Sbjct: 1652 PITLNNRGNTLIALKRYGDALSSYERAFLLKPDYAEAFYNRALALQELERHEEAVSSYEK 1711 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEM 338 + P+ A Y + +L+R ++ + + ++ E+ Sbjct: 1712 AICIK--PDYAEAY--YKRGVALQRLQRYDDALLCYDKVIALKPDYADAHYSRGLALQEL 1767 Query: 339 GSIDQAHAKAMLAMKIAPR 357 D+A + + P Sbjct: 1768 QRYDEALISYDAVIALKPD 1786 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 77/259 (29%), Gaps = 15/259 (5%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 M++A + + + Y L + + A ++ Sbjct: 2876 MALALPKARSEQDVSAVAETAARSGPAYFATLQSALALHQQGCLDDAEVLYREVVHSNPD 2935 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 AV L + + + + A AL I PD P + K + A++ Sbjct: 2936 YFEAVQLLATVAAQKQNFHEALELFDHALAIKPDHPITLNNRGNTLIALKRYGDALSSYE 2995 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + ++ A R+L + + +++ + + + A +L Sbjct: 2996 RAFLLKPDY----AEACYNRALALQELERHEEALSGYEKAIGIKPDYVEALYKRGVALKR 3051 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEI------NKESV 325 +R + +L + P+ A+ H + +L+R L N + Sbjct: 3052 L--QRYDDALLCYDKVIALKPDYADA--HYSRGLALQELQRYDEALSNYGEAIARNPQFA 3107 Query: 326 ESLVIVSKIALEMGSIDQA 344 E+ V ++ A Sbjct: 3108 EAYVNRGNALTDLKRYQDA 3126 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 18/151 (11%), Positives = 43/151 (28%), Gaps = 11/151 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + + A ++ AV L + + + A AL I Sbjct: 1588 LQSALALHQQGCLDDAEVLYREVVHSNPDYFEAVQLLATVAAQKQSFHEALELFDHALAI 1647 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 PD P + K + A++ + ++ A R+L + Sbjct: 1648 KPDHPITLNNRGNTLIALKRYGDALSSYERAFLLKPDY----AEAFYNRALALQELERHE 1703 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + +++ + + A++ + Sbjct: 1704 EAVSSYEKAICIKPDY-------AEAYYKRG 1727 >gi|42524217|ref|NP_969597.1| hypothetical protein Bd2807 [Bdellovibrio bacteriovorus HD100] gi|39576425|emb|CAE80590.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 588 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 90/232 (38%), Gaps = 13/232 (5%) Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + LY + + D AQ A L + P + Y KE+ +A + + Sbjct: 123 LLVLGGLYS-ADKSYDKAIAQYKA--VLHLEPKNSEAPIYIGSLYADKKEFKKAEQYFHS 179 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLIS 272 K+ + I + + + + S A++ +L++ A I A + Sbjct: 180 LLKDPGYETPHEVYYYIGLTHLDQEGVNHQQSAEKALKKALEIKPGFEDALISLANLYLL 239 Query: 273 QNKKRKAEVI-LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES---- 327 QN + KA + LE + N P++A++ + E+ K +LE I + ES Sbjct: 240 QNNRGKALALCLEYQKQENFSPKVADLIAQIYIEDG-DSEKAYSQLEMI-SGNSESSLDV 297 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKI 378 + ++ + +E +QA AK + P + LA +++ + + + Sbjct: 298 QMKMALLLIEQKRFNQAGAKLKDIVAQYPTADSARYYLAAVQE-ETGDMENA 348 >gi|186684910|ref|YP_001868106.1| hypothetical protein Npun_R4816 [Nostoc punctiforme PCC 73102] gi|186467362|gb|ACC83163.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102] Length = 226 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 5/170 (2%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 N L LLE + + Y+ A + + + + + G+ +A Sbjct: 36 NPQLKQLLEEGRRLVDSGDYSGAIAVYQQAASLDPKNAKIHSGIGYLYAQQGNYQAALTS 95 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +A+ I+P+ AV + + A + + A + NRN + ++ Sbjct: 96 YRRAIAINPNNSDFYYAVGYIKANLGDTAGA----KEGYRRAIQLNRNNVNAYLGLAVTQ 151 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + GD A+ +++ L N+ + + ++A +L+K Sbjct: 152 SRMGDYTAATWAYQQAIDLDKNNAQTYELMGSMYKQRRQTKQANSLLQKA 201 >gi|331665151|ref|ZP_08366052.1| cellulose synthase operon protein C [Escherichia coli TA143] gi|331057661|gb|EGI29647.1| cellulose synthase operon protein C [Escherichia coli TA143] Length = 1157 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L N + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSNQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.8 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|228938730|ref|ZP_04101334.1| hypothetical protein bthur0008_13930 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971612|ref|ZP_04132235.1| hypothetical protein bthur0003_13890 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978222|ref|ZP_04138599.1| hypothetical protein bthur0002_14250 [Bacillus thuringiensis Bt407] gi|228781239|gb|EEM29440.1| hypothetical protein bthur0002_14250 [Bacillus thuringiensis Bt407] gi|228788135|gb|EEM36091.1| hypothetical protein bthur0003_13890 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820971|gb|EEM66992.1| hypothetical protein bthur0008_13930 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 434 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++ LK + E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYI--------LKGQEK--------YEELIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYLDALKHYESAYT 381 >gi|332526320|ref|ZP_08402448.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2] gi|332110458|gb|EGJ10781.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2] Length = 921 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 88/324 (27%), Gaps = 47/324 (14%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A E L L + LA R Y A + + Q+ + Sbjct: 585 DTRGALSAAREAVAALPSSRELLAAL--ARSELANRDYQQALTSFQKLAQLQPRSPAGLL 642 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + D A+R AL+++P A++ Y + ++ A+ + +K Sbjct: 643 GQADAYLGLKDEAGAERSLKAALELAPRLLPAQRALLGLYAGSGRYAEAVALAREIQKQR 702 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 AI +A + + A+ +++ + A A +L + + + Sbjct: 703 P----GEAIGYLAEADVETARRKPEAALALIRSAVQKAPGAESAIRLHA-TLRAAGQGDE 757 Query: 279 AEVILEKIWKVNPHPE------------IAN---IYTHLLSENTVGK------------- 310 AE W+ HP+ +A + + + Sbjct: 758 AER-FAASWQKQ-HPDDIAFRFHLGDLALATKDWAAAEARYRDVLQRQPSNPMALNNVAW 815 Query: 311 ----------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L A + + ++ A G + +A ++ +P Sbjct: 816 LMLQQHKPGALALAEKANTLAPGQPALRDTLALAAAAEGQLPRALQLQKETVQRSPDSPS 875 Query: 361 FLLLAQIEQANSHNTDKILYWTQS 384 L S + Sbjct: 876 LRLTLAKLMLQSGDKTGARAELDK 899 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 95/286 (33%), Gaps = 9/286 (3%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +AA ++ A ++++ + LL+ Q A + + ++Q Sbjct: 241 VAAGDVAGAEAHVQQLAKK--LPDLAGTRLLQAQTAYLRSDFEGVRRLTQPLVQAAPNNP 298 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + ++ L A+ +A+ + P P T + + Y+ + + + L + Sbjct: 299 LVLQLAGAAEYQLRALPQAETLLAQAVKLQPGMPLATRLLAETYLRTGQADKTLALLQPE 358 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + K R +LL ++ G+ + ++ K+ + A A I + Sbjct: 359 LDSGKA--RAETLLLAGQA--YLQIGEARQAEAVFAQAAKVAPQNPRARTAVALGKIGRG 414 Query: 275 KKRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 LE + ++A I ++L + LK L+ + ++ Sbjct: 415 DTSAGLGELETLAAHESGVGADMALIASYLRQGDRAKALKAIDGLDAKRPQDPTPELMRG 474 Query: 333 KIALEMGSIDQAHAKAMLAM-KIAPRKEIFLLLAQIEQANSHNTDK 377 ++ L A A A+ + A LA ++ A Sbjct: 475 RVLLLGNDRAGARAAFGRALERDASYFPAVASLAALDLAEGKADAA 520 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 13/167 (7%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 AA A + + +QH ++ +ALA + + A + +LQ + Sbjct: 751 AAGQGDEAERFAASWQKQH--PDDIAFRFHLGDLALATKDWAAAEARYRDVLQRQPSNPM 808 Query: 156 AVYS---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A+ + L + + G A A KA ++P P + + + + RA+ Sbjct: 809 ALNNVAWLMLQQHKPG----ALALAEKANTLAPGQPALRDTLALAAAAEGQLPRALQLQK 864 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + + + + R L + GD + + + KL Sbjct: 865 ETVQRSPDSPSLRLTL----AKLMLQSGDKTGARAELDKLAKLGPGF 907 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 35/298 (11%), Positives = 75/298 (25%), Gaps = 37/298 (12%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPATR 153 +A + A + L + LA + L P Sbjct: 69 LAMGDAAGAVVELRKAEMLKLPEARVVPAL--ARATLAAGDERRVVQTWGATRLGQPEAD 126 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 +L R+ A++ AL P +Q + A+ ++ Sbjct: 127 ADLSTTLAMAYLRLDQTPKAEQAVEAALQAQPGYAPAKLLKARQLAARADLDGALRLTDE 186 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + A LL + LE + D A+ ++++ + A L++ Sbjct: 187 --LTGADARNAEAWLLKGQ-LEQYGRQDRDAALAAYRKAVEADPRQMTAHQSLVALLVAA 243 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 AE +L + + + ++ ++ Sbjct: 244 GDVAGAEA-------------------------------HVQQLAKKLPDLAGTRLLQAQ 272 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + ++ AP + L LA + + A+ P Sbjct: 273 TAYLRSDFEGVRRLTQPLVQAAPNNPLVLQLAGAAEYQLRALPQAETLLAQAVKLQPG 330 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 77/260 (29%), Gaps = 36/260 (13%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A K + + + L+ ++ L A L+ A+ AV Sbjct: 447 GDRAKALKAIDGLDAKR--PQDPTPELMRGRVLLLGNDRAGARAAFGRALERDASYFPAV 504 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 SL G ++A++ L P A+ + + + A + Sbjct: 505 ASLAALDLAEGKADAARKRFDDELARDPKNWRAMLALAEWHERTGGGADAASTQYAAAVK 564 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A N A+ + + + D + A E++ +S A+S ++ + Sbjct: 565 AAP---NEALPRLRLIDDRLARRDTRGALSAAREAVAALPSSRELLAALARSELANRDYQ 621 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +A L +L ++ S L+ + L Sbjct: 622 QA-------------------------------LTSFQKLAQLQPRSPAGLLGQADAYLG 650 Query: 338 MGSIDQAHAKAMLAMKIAPR 357 + A A+++APR Sbjct: 651 LKDEAGAERSLKAALELAPR 670 >gi|7429602|pir||E65151 hypothetical 126K protein (dctA-dppF intergenic region) - Escherichia coli (strain K-12) Length = 1166 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 361 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 418 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 419 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 478 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 479 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 538 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 539 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 595 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 596 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 649 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 650 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 701 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 593 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 652 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 653 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 712 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 713 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 747 Score = 36.8 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 266 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 320 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 321 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 380 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 381 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 424 >gi|237747684|ref|ZP_04578164.1| HemY protein [Oxalobacter formigenes OXCC13] gi|229379046|gb|EEO29137.1| HemY protein [Oxalobacter formigenes OXCC13] Length = 401 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 55/401 (13%), Positives = 124/401 (30%), Gaps = 35/401 (8%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R+ + + ++ +V W S L +L + L+F Sbjct: 1 MRIFLWILGLFATAVGLAVLVRFNAGNVVFFWPPYRVDISLNFFLLLLVLLIILLFLVFK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 L P+ + + ++ + +AL L ++ A+K + N Sbjct: 61 AIHMALRLPSRISQIREQKKEQESNQALRQSLKALFEGRFVQAQK--AAEKAWEWEKNRG 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ + + A +QY+ E L+ + + + + A + Sbjct: 119 YAALIGARASQAVQQYDKRDEYLKSIEDNEDYDTACLVTKAELYIDEHQPHKALDVISDL 178 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---LIARSLENA 237 V ++ W + + K+ + RA+L L + N Sbjct: 179 NANGTRHIHVQRLSLKANQQIGNWKEVLRLVQSLDKH----HSIRAVLSEKLKEAAYVNL 234 Query: 238 DKGDMIASYHDAI------ESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIW 287 + A+ E + +I AAK+ +K+E +L+K W Sbjct: 235 FDTAAPDAESVALVWQDVPEQEREKPA---VAISAAKAFYHCMLPKKSEEILYRVLDKFW 291 Query: 288 KVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + N + ++ + R E + L+ + +A D+ Sbjct: 292 DDR----LVNAFVEFAESREPDDLTVQAGHCERWLEKYGRQPQLLLALGVLASRQKQFDK 347 Query: 344 AHAKAMLAMKIAPRKEIF----LLLAQIEQANSHNTDKILY 380 + + A+ + +++ LLLAQ+ H + + Sbjct: 348 SASCFEEAISLTSDRKLLYQAHLLLAQLHDRLGHEEKAVRH 388 >gi|320539472|ref|ZP_08039141.1| putative conserved protein [Serratia symbiotica str. Tucson] gi|320030597|gb|EFW12607.1| putative conserved protein [Serratia symbiotica str. Tucson] Length = 390 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 81/258 (31%), Gaps = 28/258 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R AV L + G + A+ + IS Sbjct: 83 GEVDRAICIHQALMESSSLSFEQRLLAVQQLGRDYMSAGMYDRAEDMFSQLIDEEDFRIS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W +AI + K + A +L+ D+ Sbjct: 143 -----ALQQLLVIHQATSDWMKAIDVAEKLVKLGMDKQHIEIAHFYCELALQAVSSDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVIL--EKIWKVNPHPEIAN 297 + + SI + ++Q+ KA + +L +K P + Sbjct: 198 KAMSLLKRAASADKQCARVSIMFGRIYMAQHDYAKAIESLQRVLSQDKELVSETLPMLHQ 257 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y H + R E N + + +++++I + D A ++ P Sbjct: 258 CYQH-WPDQQQVWTGFLKRCVEENCGAT-AELMLAEIIEQYEGCDVVQAYINRQLQRHPT 315 Query: 358 KEI-FLLL----AQIEQA 370 + + L+ A E Sbjct: 316 MRVFYRLMDYHLADAEDG 333 >gi|66044282|ref|YP_234123.1| peptidase aspartic, active site [Pseudomonas syringae pv. syringae B728a] gi|63254989|gb|AAY36085.1| Peptidase aspartic, active site [Pseudomonas syringae pv. syringae B728a] Length = 654 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 48/310 (15%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLVY---LLEVQIALAERQYNIA----------HE 141 + ARK + + E L L + Q A+ A + Sbjct: 116 GSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQAAI--NDAEQALGPQQVLTRRRQ 173 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 ++ + + + GD ++A A +A+ P + +V + Sbjct: 174 AIQEQVAVDK-AATGYK-----ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQ 227 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 +++ A + + N N A LL+ R GD + D ++ + ++ Sbjct: 228 GQYAEARSAATEALA----LNGNDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLP 281 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRAL 315 A + + +A L+K P E+ Y + + + KR Sbjct: 282 LRE-QASLYAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVD 340 Query: 316 RLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 R + ++ S + S A + + P +++F Sbjct: 341 RQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLDYQQTGDLQMPAQQVF-------DTR 393 Query: 372 SHNTDKILYW 381 +D W Sbjct: 394 RAVSDLSREW 403 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 93/308 (30%), Gaps = 33/308 (10%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 M+ + LA + + + L + + + + + Sbjct: 40 EAYMAYNRKDYDLA--IAKANEALRQRGDAQQLRDLITLAERDKYRRDHPQRAYK--TRP 95 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 +L + R D + + +A KA+ +P +++ + +A Sbjct: 96 QPGYLEGNRALRAYANR--DYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDQAQA 153 Query: 210 FL---NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD-------AIESLKLCDNS 259 + Q + R R + +++ A G + D A E+++ Sbjct: 154 AINDAEQALGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQ 213 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + +LI+Q + +A A L + ++R + Sbjct: 214 MAYRKLLVSALIAQGQYAEARSA-------------ATEALALNGNDATLLVQRGQMRQR 260 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 + + + ++ A+ +G++ ++ A P + + L + D++ Sbjct: 261 LG-DQDGARQDFAQ-AMAVGNLPLREQASLYAAMGQPSEALQRLQKARDAGELQPGDEVQ 318 Query: 380 --YWTQSA 385 Y+ A Sbjct: 319 IAYFLSQA 326 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L +L TG ++A + A + Y L+ Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221 Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 IA QY A + AT + R+GD + A++ +A+ Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234 + + P +A + Y + S A+ L + + + A L +L Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDQGAL 333 Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264 + + D A +++ +++ + Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369 >gi|83309792|ref|YP_420056.1| methyltransferase [Magnetospirillum magneticum AMB-1] gi|82944633|dbj|BAE49497.1| Predicted methyltransferase [Magnetospirillum magneticum AMB-1] Length = 451 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 13/171 (7%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMML 147 G++ + + AR + ++ H L L LE A +L Sbjct: 68 RGVILASLGRLDEARTAFAKCLERFPTHEPALTNLGGLE----HLAGNLAEAERCYRAVL 123 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 A+++L G + A+ +A +A++I P P + A + A Sbjct: 124 DFAPRSALALHNLAGLFLAQGRRDEAEAFARRAVEIEPG-PDTALRLADILGEAGRHAEA 182 Query: 208 ITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 L + RA+ A+ +G + + +L L Sbjct: 183 AAMLGPVLDAYPADVRLWRAVGHAAK-----KQGRTLDAVAAYRTALGLDP 228 >gi|330869318|gb|EGH04027.1| cellulose synthase operon protein C [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 1298 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 60/295 (20%) Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156 A + ++ N L L + + A+ Q A L + + P R Sbjct: 334 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213 L + G L++AQ + L P ++ + A+ L+ Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + R +A+ + +GD+ A+ +++K +++ A+ + Sbjct: 450 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509 Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298 ++ KA V+++++ K P P++ + Sbjct: 510 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569 Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + L RL+ + S E + ++ ++ Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDADE 624 >gi|251793293|ref|YP_003008021.1| HemY protein [Aggregatibacter aphrophilus NJ8700] gi|247534688|gb|ACS97934.1| HemY protein [Aggregatibacter aphrophilus NJ8700] Length = 423 Score = 50.3 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 7/167 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+R + ++ + + +S V I N + S ++ L + A Sbjct: 1 MIRALFLMLLLLAGLIAGPYLSGKQGYVRIETTNHIIEMSLTTLVIFFVISLAVVYSIEA 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 F + + +R K K GLM + + A K+ ++ Sbjct: 61 AINRFCNLSNNTYSWFSRRKRVKAQKQTLEGLMRMDEGDYSKAEKLIGKNAKH--SDEPV 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 L ++ + A A+ L I AT SL E R Sbjct: 119 LNFIKAAEAAQQRGDEFSANRYL-----IQATEIAGTDSLILEIART 160 >gi|224369129|ref|YP_002603293.1| tetratricopeptide (TPR) domain protein [Desulfobacterium autotrophicum HRM2] gi|223691846|gb|ACN15129.1| tetratricopeptide (TPR) domain protein [Desulfobacterium autotrophicum HRM2] Length = 761 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 104/304 (34%), Gaps = 48/304 (15%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA-TREF 155 N A + ++ V + + LV L + + A EK+E +L+ P T Sbjct: 76 GNPREAFQAYTKVETHDPDNKDALVKL--ASFFILGKDLEKAKEKIEHVLKLDPDNTDA- 132 Query: 156 AVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 L+ ++ + D+++A + +D PD +A+ + + +E+ +A L Sbjct: 133 ----LFLKAQILTQEKDVDTASTLLERIIDKKPDHINALQALARIKMFKQEFEQAEALLV 188 Query: 213 QK-----------------KKNAKEWNRNRAILLIARSLENAD-------------KGDM 242 + K + A LL A + + K + Sbjct: 189 KAVDVDTAAIQPRLALVTFLIAKKRFKDAEAQLLAAVEKNSENSDVRIILGNFYFRKRNN 248 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 ++ +++++L ++ + AA N + KA + +K + P IA T Sbjct: 249 PSAEAAYLKAVELAPKAMKPYMTAAGFYDITNSRDKALDMYQKALAIQPD-NIAVKTTLA 307 Query: 303 LSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357 + ++ A L + ++ ++ S+I + QA K P Sbjct: 308 RFQYKEQQVDAAEALVAEMLKQRPKFRQARMLKSEILVSKKQFSQALMLLQDLEKEDPKD 367 Query: 358 KEIF 361 + Sbjct: 368 ARVL 371 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 97/261 (37%), Gaps = 10/261 (3%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 LA+ + V + + + ++ + + + A + ++ + Y + Sbjct: 420 LAQAQAAEVLKLNPSNYRAA--MISAKSHMNTGKIQKAEAGFKTLIALDPENPAGYYQMG 477 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 F + + A+ Y +A+D++ V +++ Y + A ++ + AK+ Sbjct: 478 FLKSALKQYDVAESYLNQAMDMNNMLLDVFTLLLKNYTNQNKLDTAHALCQKQLERAKDK 537 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE- 280 + AI+ + + + +++ + + A+ +++ + KA Sbjct: 538 PQILAIINYLEGSLYLAQKETNKAKDAYYRAIEANPDYLEPYGAIARIALAEQDREKAVI 597 Query: 281 ---VILEKIWKV-NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS-KIA 335 +LEK + PH + +IY S + + EIN E + ++ +A Sbjct: 598 QYLTLLEKNPNLPAPHMMLGSIYETDKSFDKAE--AHYRKALEINPEYAPAANNLAYHLA 655 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 DQA A A +A K P Sbjct: 656 ERTDKFDQALALARIAKKKLP 676 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 66/223 (29%), Gaps = 41/223 (18%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI-- 227 + A KAL I PD V + + ++ A + + K ++ + R + Sbjct: 282 RDKALDMYQKALAIQPDNIAVKTTLARFQYKEQQVDAAEALVAEMLKQRPKFRQARMLKS 341 Query: 228 ---------LLIARSLENADKGDMIASYHDAIESL-------------------KLCDNS 259 L++ +K D + + L +L Sbjct: 342 EILVSKKQFSQALMLLQDLEKEDPKDARVLYFQGLCQIGLQENDMARAAVARAVELNPGY 401 Query: 260 IMASICAAKSLISQNK----KRKAEVILE---KIWKVNPHPEIANIYTHLLSENTVGKLK 312 + A + A + + +A +L+ ++ + + +H+ + Sbjct: 402 LKAHLLLADIYFHERSFDLAQAQAAEVLKLNPSNYRAA----MISAKSHMNTGKIQKAEA 457 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L ++ E+ + + + D A + AM + Sbjct: 458 GFKTLIALDPENPAGYYQMGFLKSALKQYDVAESYLNQAMDMN 500 Score = 38.0 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 23/201 (11%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + A+ AL +SPD P V + + + A + + + + Sbjct: 40 SDKEYKKAEIEFRNALQLSPDDPQVWSLLGKTLMKLGNPREAFQAYTKVETHDPDNKD-- 97 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L+ + D+ + LKL ++ A A+ L + A +LE+ Sbjct: 98 --ALVKLASFFILGKDLEKAKEKIEHVLKLDPDNTDALFLKAQILTQEKDVDTASTLLER 155 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLK-------RALRLEEINKE----SVESLVIVSKI 334 I P H+ + + ++K +A L + +++ + + Sbjct: 156 IIDKKP--------DHINALQALARIKMFKQEFEQAEALLVKAVDVDTAAIQPRLALVTF 207 Query: 335 ALEMGSIDQAHAKAMLAMKIA 355 + A A+ + A++ Sbjct: 208 LIAKKRFKDAEAQLLAAVEKN 228 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 9/176 (5%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y A+ +++A + A + Y++ N +++ I ++ ++ A Sbjct: 579 YGAIAR--IALAEQDREKA--VIQYLTLLEKNPNLPAPHMMLGSIYETDKSFDKAEAHYR 634 Query: 145 MMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L+ P A Y + R + A A A P+ P V + + Y Sbjct: 635 KALEINPEYAPAANNLAYHLAERTDKFDQALALARIAKKKLPNDPGVMDTLGYVYYKKGL 694 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + A++ L + + ++ L KGD + ++L+L + Sbjct: 695 YGNAVSELLDSLEKIPDAP----VVHYHLGLTYLKKGDKALAVTQLEKALELNKDF 746 >gi|73537360|ref|YP_297727.1| TPR repeat-containing cellulose synthase operon C [Ralstonia eutropha JMP134] gi|72120697|gb|AAZ62883.1| TPR repeat:Cellulose synthase operon C, C-terminal:Tetratricopeptide TPR_4 [Ralstonia eutropha JMP134] Length = 1265 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 82/286 (28%), Gaps = 43/286 (15%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +A G +A N+ A +++ E L L V+ L + +++ A E Sbjct: 275 QARRRGEQQLARGNVREAETALESANRKRRNDGETLGNLGLVR--LRQGRHDEARELFAR 332 Query: 146 MLQ------------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Q R + + E+ G + A +AL + P Sbjct: 333 AEQLDSGNRGKWHSLKDTARFWGTVAKAREANAQGKPAQGEALAREALALQPGNANARGV 392 Query: 194 VVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + A L + + R ++ + + +D+ + + + Sbjct: 393 LADALIAQNKLPEAEALLRETLAGPEPDIGTLRTLVKLLNDSQRSDEVGPLIASTGSR-- 450 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 LK + + + A L Q ++ A+ K +P L Sbjct: 451 LKGSADELRS--LRADLLSLQGEQLLAQR------KQSPA------------------LA 484 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 R + + +++ ++ + +P Sbjct: 485 RLEESIRLAPNDPWTRFTLARAYRDLALPALGRRVMEDGLAASPTS 530 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 63/202 (31%), Gaps = 22/202 (10%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + + A L + R L+ + +GD + A E L Sbjct: 697 DRRIADGDLKGAERMLYAVPAAQQNDRRW----LLELADLREAQGDYDGAAQAAREVLTT 752 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVG 309 A + A+ L Q K +A + + P +I A +T + E+ Sbjct: 753 HPQDADARLTVARMLERQGKDDQALEEVRAVLADTPEDDIDTRLAVARRFTAMRREDEA- 811 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 L L E E + + +IA G + A A R+ +I + Sbjct: 812 -LAVVTPLRERFPERSDVTMQAGRIAQSRGDFNGAAVLYREARVQEQREN------EIPR 864 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 + ++ L AL A + Sbjct: 865 PQGTSAERALG----ALEARRE 882 >gi|238761231|ref|ZP_04622208.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638] gi|238761484|ref|ZP_04622460.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638] gi|238700458|gb|EEP93199.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638] gi|238700711|gb|EEP93451.1| Cellulose synthase protein C [Yersinia kristensenii ATCC 33638] Length = 1146 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 37/230 (16%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL +A +K + I + +A+ L + D SA+++ +AL + P Sbjct: 351 ALKAGDTALAQQKYQQARLIDGSDSYALIGLGDVAVARHDDKSAEQHYQQALRLDPTNSS 410 Query: 190 VTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + Y +A+ +LN Q+ K + + +L ++ A + Sbjct: 411 AVRGLANIYQRESP-QKALDYLNNLPRSQQAKMRDTLDSLQLAMLKQQAEALAAQQQWHQ 469 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + + K + + + A++L + +A+ Sbjct: 470 AAEKYQQVQKRAPDDVWITYRLAEALAQEGDSAQADA----------------------- 506 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +L + E + + G QA A Sbjct: 507 --------QFHQLASRKPDDPEQVYAFALYLSSTGRDSQALAHLATLPTT 548 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 86/315 (27%), Gaps = 51/315 (16%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 ++ A + LA++ + + L+ L +A+A A + + L++ T Sbjct: 351 ALKAGDTALAQQKYQQARLIDGSDSYALIGL--GDVAVARHDDKSAEQHYQQALRLDPTN 408 Query: 154 EFAVYSLYFESCRIG--------------------DLNSAQRYA---------------- 177 AV L R D + + A Sbjct: 409 SSAVRGLANIYQRESPQKALDYLNNLPRSQQAKMRDTLDSLQLAMLKQQAEALAAQQQWH 468 Query: 178 ------TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILL- 229 + +PD W+T + + + ++A +Q + + + A L Sbjct: 469 QAAEKYQQVQKRAPDDVWITYRLAEALAQEGDSAQADAQFHQLASRKPDDPEQVYAFALY 528 Query: 230 ---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285 R + + + +L + + + L + + A L + Sbjct: 529 LSSTGRDSQALAHLATLPTTQWNDNIHELDQRLKLGQVLTLTRQLRASGDEAGAITALRQ 588 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 N ++ L + L R+ ++ ++ + + + G + A Sbjct: 589 Q-PANTQIDLTLADWALERGDYSEALAGYQRIRAREPQNPDARLGEIEAYIAEGRLSDAR 647 Query: 346 AKAMLAMKIAPRKEI 360 + Sbjct: 648 QHLQTEPLTGEGASV 662 >gi|182413699|ref|YP_001818765.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177840913|gb|ACB75165.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 302 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 53/167 (31%), Gaps = 13/167 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + + A + + + + L + + R D ++A R+ KA+ + Sbjct: 30 LAAARALFEAHKDAEAQSAYAALTEKDSGNPEPLRCLGYLALRRNDGDAAVRWFEKAVGL 89 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----------NAKEWNRNRAILLIAR 232 +P A+ + + + ++ KK + + ++ + R Sbjct: 90 APTHAETHRALGDAFGTKAQQAGVLSKFGLAKKCLASYQRAARLDPADARTHQCLFEYYR 149 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 G + +A +L ++ A ++ K +A Sbjct: 150 QAPAIAGGGTDKAAAEAAILKQLDPAR--GALAYATLYQAEKKFTEA 194 >gi|166364168|ref|YP_001656441.1| periplasmic protein [Microcystis aeruginosa NIES-843] gi|166086541|dbj|BAG01249.1| periplasmic protein [Microcystis aeruginosa NIES-843] Length = 363 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 63/202 (31%), Gaps = 6/202 (2%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQI 149 L+ + A A + + V L Q Y A E + Sbjct: 10 LVGLLAGGCFSASIAIADNPAGAIVSKDSQVNELLRQARQLVKNGNYGEAIAIYERAAAL 69 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + F R GD N+A + KAL + P P A+ ++ A T Sbjct: 70 DGNNAKIFSGIGFLQTRQGDYNAAAQAYQKALSLDPSNPDFFHALGYSLANIGDYDNAAT 129 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + ++ + + + + + L L N+ A K+ Sbjct: 130 AYYYAIQIEPKNVQH----YLGLGVVLLRQKNYAKAGEVYQWVLALDPNNQQAHEIMGKA 185 Query: 270 LISQNKKRKAEVILEKIWKVNP 291 LI QNK +A L+K + P Sbjct: 186 LIEQNKSSEALDFLQKSLQRFP 207 >gi|238902619|ref|YP_002928415.1| cellulose synthase subunit [Escherichia coli BW2952] gi|238860134|gb|ACR62132.1| cellulose synthase subunit [Escherichia coli BW2952] Length = 1140 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 675 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398 >gi|293395960|ref|ZP_06640241.1| N-acetylglucosaminyl transferase [Serratia odorifera DSM 4582] gi|291421458|gb|EFE94706.1| N-acetylglucosaminyl transferase [Serratia odorifera DSM 4582] Length = 390 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 81/260 (31%), Gaps = 32/260 (12%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R AV L + G + A+ IS Sbjct: 83 GEVDRAIRIHQALMESASLTFEQRLLAVQQLGRDYMAAGLYDRAEDMFSQLTDETDFRIS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W +AI + K K+ R A +L+ D+ Sbjct: 143 -----ALQQLLVIHQATSDWQKAIDVAERLVKLGKDKQRIEIAHFYCELALQAMGSDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIAN 297 + + SI + ++Q + KA L+ K P + Sbjct: 198 KAMSLLKRAASADKQCARVSIMFGRIYMAQGEFGKAVESLKRVLDQDKELVSETLPMLHE 257 Query: 298 IYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y L L LKR E N + + +++++I + + ++ Sbjct: 258 CYEQLPQLQGAWAEFLKRC---VEENTGAT-AELMLAEIIEQHEGREVVQVYINRQLQRH 313 Query: 356 PRKEI-FLLL----AQIEQA 370 P + + L+ A E Sbjct: 314 PTMRVFYHLMDYHLADAEDG 333 >gi|291439358|ref|ZP_06578748.1| secreted protein [Streptomyces ghanaensis ATCC 14672] gi|291342253|gb|EFE69209.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 481 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 83/265 (31%), Gaps = 39/265 (14%) Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ A + L L+ P A+ L + D A+R+ +A + P + Sbjct: 122 WSRAEKALRTSLKVRPKGNARALRGLAALANARRDYAGARRWGEEARKLEPKRWTTYPLL 181 Query: 195 VQQYVLAKEWSRAITFLNQ--KKKNAKEWN------------RNRAILLIARSLENA--- 237 ++ + A L++ ++ E R A + +A ++ A Sbjct: 182 IEACTGLGDHKAAGDMLDRLAALRSGPEVMARAAAVYRDRGWREDAAVQLADAVSAAGEP 241 Query: 238 ---------------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 ++GD + E++++ + A ++L + + +A Sbjct: 242 AERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALTA 301 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL------RLEEINKESVESLVIVSKIAL 336 P PE A L K RA R+ + +++ + Sbjct: 302 YRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLVLGRFEA 361 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361 + G + A + + P E+ Sbjct: 362 DHGDAEAAVRRLRAEWERQPSTEVA 386 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 78/298 (26%), Gaps = 40/298 (13%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------I 149 + A M ++ + + + A R + + Sbjct: 187 GLGDHKAAGDMLDRLAALRSGPE------VMARAAAVYRDRGWREDAAVQLADAVSAAGE 240 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 PA R + + GD A R +A+ I PD + + A+T Sbjct: 241 PAERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALT 300 Query: 210 FLNQKK--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASIC 265 + E+ L + + + ++ + Sbjct: 301 AYRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLV----- 355 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKES 324 + A L W+ P E+A+ + + R+ L + + Sbjct: 356 LGRFEADHGDAEAAVRRLRAEWERQPSTEVADAL-----GWALHRAGRSEEALPFALRAT 410 Query: 325 VESLVIVSKIAL----------EMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQ 369 E + AL E+G A A++I P + L A +E+ Sbjct: 411 DEGRGGGVRSALYVFHRGMIEREVGRDGAARRHLRQALQINPYFSPLRVPLAKAALER 468 >gi|162454220|ref|YP_001616587.1| TPR domain-containing protein [Sorangium cellulosum 'So ce 56'] gi|161164802|emb|CAN96107.1| TPR domain protein [Sorangium cellulosum 'So ce 56'] Length = 449 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 16/169 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWN 222 D SAQR A +AL I+PD + + + + A+ L + Sbjct: 195 DTGSAQRIAQEALKINPDYRPAMVIIARDHYRNRRLDLALYALQAILDGFEPVSENPPRD 254 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R+ A L+ R L ++G A+ + ++ + + A + A L+ ++A + Sbjct: 255 RDNAEALLLRGLIYREQGQRAAALEEFRRAVTRRPDLVEARVQLATYLLEAGNAQEALPL 314 Query: 283 LEKIWK-----VNPHPEIANIYTHLLSENTVGK-----LKRALRLEEIN 321 LE + + H + + Y L + L R L +++ Sbjct: 315 LEGAVRFDSEHLAAHLNLGDAYRLLERYADAKREFDWVLARDPNLAQVH 363 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 84/279 (30%), Gaps = 28/279 (10%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A A A + Q A YSL R+ D + Y +A I PD Sbjct: 89 AFATGDLVNARAQFGQATQADPRAHQAFYSLGVVQERLRDAGAGASY-RQAFTIVPDYEP 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A + A LN+K+ + A L +SL+ D ++ A Sbjct: 148 AIIAYAMLLARKNQLGEAERLLNEKRGQMPKSAAVAATLAEVKSLQR----DTGSAQRIA 203 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHPE-------IA 296 E+LK+ + A + A+ + A L+ I NP + + Sbjct: 204 QEALKINPDYRPAMVIIARDHYRNRRLDLALYALQAILDGFEPVSENPPRDRDNAEALLL 263 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L+ R + VE+ V ++ LE G+ +A A++ Sbjct: 264 RGLIYREQGQRAAALEEFRRAVTRRPDLVEARVQLATYLLEAGNAQEALPLLEGAVRFDS 323 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395 L N + A + W+ Sbjct: 324 EHLAAHL----------NLGDAYRLLERYADAKREFDWV 352 >gi|325107155|ref|YP_004268223.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324967423|gb|ADY58201.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 368 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 4/157 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q Y +A + + + T +Y+L + + GD +A+ Y +AL++ P Sbjct: 38 SGQAYYKHGNYTLAKREFQKAVMDDPTNPHYMYNLATATQKNGDFATAEYYYRQALNLDP 97 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A A L+ + A I + +GD + + Sbjct: 98 SHQPSYHGLATMMADAGRGMEAEQLLSAWAGSQPYL----AEPHIELAWFQRTQGDYMGA 153 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 ++L++ A + SQ + ++A + Sbjct: 154 EQSLRQALQINPQHERAIAQLGQVYESQGRGQEAMSL 190 >gi|331655157|ref|ZP_08356156.1| cellulose synthase operon protein C [Escherichia coli M718] gi|331047172|gb|EGI19250.1| cellulose synthase operon protein C [Escherichia coli M718] Length = 1157 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ +N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKTNNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 Score = 36.5 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKTNNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|284052245|ref|ZP_06382455.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] Length = 672 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 109/318 (34%), Gaps = 64/318 (20%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESCRIGDLNSAQRYATKALDIS 184 + ++ A L+I VY LY E D A AL ++ Sbjct: 50 AYQKQGEFEPALIAYTKALEIKP-DFGEVYGNLGSLYAEHKLWEDAVQAYDV---ALRLN 105 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMI 243 PD + + Q ++ ++ AI+ ++ AK+ + +A L+ +L N +K Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAIS--YCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAE 163 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------N 297 A+Y +E CD + L Q + A +K ++NP E+A Sbjct: 164 AAYQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNA 220 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E + ++A+ +IN + S + + + LE+G + +A A + A+++ P Sbjct: 221 WFRLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNPN 277 Query: 358 K----------------------------------------EIFLLLA-QIEQANSHNTD 376 ++ L + + + + D Sbjct: 278 SYWAHENLGDALSQNGCFSEAIPIYLQALQKVPEDKPGVSNSLYRQLGYAMREQSQADVD 337 Query: 377 KILYWTQSALHAMPDPLW 394 K W + PD W Sbjct: 338 KASQWLSEMISHPPDHNW 355 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 47/237 (19%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L ++ G+ A TKAL+I PD V + Y K W A+ + + Sbjct: 48 GLAYQKQ--GEFEPALIAYTKALEIKPDFGEVYGNLGSLYAEHKLWEDAVQAYDVALRLN 105 Query: 219 KEW--------------------------------NRNRAILLIARSLENADK-GDMIAS 245 + + +A L+ +L N +K A+ Sbjct: 106 PDLVGLYRNLAQLLIMFGKYEDAISYCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAEAA 165 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------NIY 299 Y +E CD + L Q + A +K ++NP E+A + Sbjct: 166 YQRGVELNPQCDR---IHVDLGNMLAQQGNWQPAIAAYKKAIEINPQNELAYHKLGNAWF 222 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E + ++A+ +IN + S + + + LE+G + +A A + A+++ P Sbjct: 223 RLQEPEKAISVYQKAM---QINPNTPWSHLPLGRSLLEVGKVKEAIAICLRAIELNP 276 >gi|53714714|ref|YP_100706.1| hypothetical protein BF3429 [Bacteroides fragilis YCH46] gi|265765822|ref|ZP_06093863.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16] gi|52217579|dbj|BAD50172.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|263253490|gb|EEZ24955.1| TPR repeat-containing protein [Bacteroides sp. 2_1_16] Length = 283 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 8/167 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + L I L + + A+ ++M + T + + Y R D A+ + Sbjct: 105 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 162 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L+I P + ++ A+ LNQ E A+L +AR+ D Sbjct: 163 LLEIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPE----DAVLYVARADVERDM 218 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L +SI A + + Q KK A+ EK Sbjct: 219 KHDDLALVDLDEAIRLAPDSIDAYLLRGDIYLDQKKKSLAKADFEKA 265 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 16/194 (8%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q K + N + A+L L G + +L + ++ + Sbjct: 51 AEDLLKQALK-LEPKNAHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILLNR 109 Query: 267 AKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLE 318 A + Q + KA + +K + + Y + L + +L RL Sbjct: 110 AAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQRLL 164 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377 EI+ ++ + ++ + + +A + P +++ A +E+ H+ Sbjct: 165 EIDPKNYNGRLGLATLEQKENKFREALDILNQLLVEFPEDAVLYVARADVERDMKHDDLA 224 Query: 378 ILYWTQSALHAMPD 391 ++ A+ PD Sbjct: 225 LVD-LDEAIRLAPD 237 >gi|323189323|gb|EFZ74606.1| cellulose synthase operon protein C [Escherichia coli RN587/1] Length = 1157 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGETAAAQQ 692 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V E + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGETAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 37.2 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|322434243|ref|YP_004216455.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9] gi|321161970|gb|ADW67675.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9] Length = 742 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 92/265 (34%), Gaps = 14/265 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + L++ A A +L S G+ + A + KAL++ P A Sbjct: 414 DKAQAATKRALELDANCAPAYVTLARISTTGGNTSLALQQVAKALELEPLNAEAYAAKAD 473 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + + + A L+ A + R +L G++ + +L Sbjct: 474 VFAAERRDADAKEALSHAVDLAPDDWRFPVLLGNYE----FAAGNLQEAVTLYKRGAELA 529 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRA 314 ++++A + + +A+ EK K+ P I + LLS ++ Sbjct: 530 PDNVIAFYNLGDTQEKLGQLGEAQASFEKALKIEPRFAIYSALGGLLSLEGKHAEAIRMG 589 Query: 315 LRLEEINKESVESLVIVSKIAL--------EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + E+N + +++ L M + +A A A +PR L+ Sbjct: 590 QKAVELNPGDYNTRQNLAEAYLWSPGGREQAMATYREAIGLAEHARLTSPRDPALLISLA 649 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 A + + K L + +L PD Sbjct: 650 YAYALTGDKGKSLPLIRQSLALSPD 674 Score = 36.8 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 81/278 (29%), Gaps = 55/278 (19%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A A + +++ +L A A + ++ Sbjct: 474 VFAAERRDADAKEALSHAVDLAPDDWRFPVLLGNYEFAAGNLQEAVTLYKRGAELAPDNV 533 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A Y+L ++G L AQ KAL I P + A+ L + + AI + Sbjct: 534 IAFYNLGDTQEKLGQLGEAQASFEKALKIEPRFA-IYSALGGLLSLEGKHAEAIRMGQKA 592 Query: 215 --------------------------------------KKNAKEWNRNRAILLIARSLEN 236 ++A+ + LLI+ + Sbjct: 593 VELNPGDYNTRQNLAEAYLWSPGGREQAMATYREAIGLAEHARLTSPRDPALLISLAYAY 652 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 A GD S +SL L + S+ A + ++ +A ++ K +A Sbjct: 653 ALTGDKGKSLPLIRQSLALSPDDPDVSLRAGVTYEVLGQRAEALRLVAKA--------LA 704 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 Y+ + E+ L + + ++K Sbjct: 705 GSYSPVWVEHNPE-------LAGLRSDPGFGA-ALAKA 734 >gi|299135117|ref|ZP_07028308.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] gi|298590094|gb|EFI50298.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] Length = 732 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 4/114 (3%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A + P AP + ++ A+ + A A LL AR LE Sbjct: 166 ERAATLHPSAPEAWIGLGDIACKNRDIKAALAHTQKALTLAP--KSAEACLLQARLLEMR 223 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++L + + A I ++ L + + + ILE+I + NP Sbjct: 224 FL--HEEALIAIKQALAAAPDLVEADILRSRILFTAKRYSETIPILERIIRSNP 275 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 88/263 (33%), Gaps = 37/263 (14%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A Q +IA +L + + L + G+L R TKAL + P +P Sbjct: 16 AHRAGQLDIAASLYREVLTHDKKQFAPQHLLGVIEGQRGNLAEGIRQITKALRLDPKSPE 75 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + A + S A + + + N + A+ + + A Sbjct: 76 AYLNLGRMQGEAGDLSNA----EKSLRKSISLNPSNALAYGNLAAVYRRMKRYEEAKTAA 131 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 ++L++ N MA LI++ L Sbjct: 132 DQALRIDPNEWMA-------LINRGNA------------------------LLALNLLDD 160 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIE 368 R ++ + E+ + + IA + I A A A+ +AP E LL A++ Sbjct: 161 AKADYERAATLHPSAPEAWIGLGDIACKNRDIKAALAHTQKALTLAPKSAEACLLQARLL 220 Query: 369 QANSHNTDKILYWTQSALHAMPD 391 + + + ++ + AL A PD Sbjct: 221 EMRFLHEEALIA-IKQALAAAPD 242 >gi|115373252|ref|ZP_01460552.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310824551|ref|YP_003956909.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115369698|gb|EAU68633.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309397623|gb|ADO75082.1| Tetratricopeptide repeat family protein [Stigmatella aurantiaca DW4/3-1] Length = 377 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 92/286 (32%), Gaps = 34/286 (11%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 A + +S+ + + V LL A+ + ++ A E +++++ P+ A + L Sbjct: 46 RADQAEELLSRVKSEDTQGEVTLLRAAAAIQRKDFSRAREHYQVLIRQPSPPAEAWHGLG 105 Query: 162 FESCRIGDLNSAQRYATKALDISPD----------------------APWVTEAVVQQYV 199 G A+ +A+ + P+ +V + Sbjct: 106 VALLAQGKAAEAREAHEQAVALKPNQSGFRFELGVALAMEKRPRAAVHQFVQGLRLDARD 165 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 W+ A L Q+ K A L + +G + A ++++ + Sbjct: 166 ARAYWALA-QVLTQQGKVLLARRVLEAGLKQVPQSQLL-QGALSAGQDASVDAH-ATPDV 222 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIW----KVNPHPEI-ANIYTHLLSENTVGKLKRA 314 A A L+++ + R+A +L + W + P + A L + G + Sbjct: 223 --ALFHQASMLLARKRGREALKLLREGWEHGTRSLPLKLLEAEACKDLQPPDMPGVFRAY 280 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAK--AMLAMKIAPRK 358 + E + L+ G + A A ++ P Sbjct: 281 EEAIAFAPDHWEPYTRLGVSLLKEGHRYEPRAIELLETARRLEPSM 326 >gi|294146975|ref|YP_003559641.1| cellulose synthase protein C precursor [Sphingobium japonicum UT26S] gi|292677392|dbj|BAI98909.1| cellulose synthase protein C precursor [Sphingobium japonicum UT26S] Length = 1125 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 34/228 (14%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-KEWNR 223 +GD A + A +ALD +P A + A+ L Q ++ Sbjct: 426 LELGDARGAGQLAAQALD-APAND------------AGAYDAAVRVLAQTGQDGMAMSAV 472 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +A L SL+ + + A ++ ++ + A +L Sbjct: 473 QKASALAGPSLQGQRSLGNLKATLAAAQADRM---------------RQAGQFAPAFDLL 517 Query: 284 EKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + W P + EI + L + L +++V + A G Sbjct: 518 QAAWNDAPGNEEILSALARLYQSGGLNAQAAQTFRMLLAQKPADRDAMVGLIDTASASGD 577 Query: 341 IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYW-TQSAL 386 ++ A A A A++ P +++ A++ Q + D Y T AL Sbjct: 578 METARAVAQQAIQTHPADYRVYMAAARMAQTRGSDGDAARYLKTARAL 625 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 89/343 (25%), Gaps = 44/343 (12%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-----VYLLEVQIALA-- 132 D+G A G ++ A + A + + L V L + + A A Sbjct: 116 RTDRGGDARAAGFRALEAGQLDSAAARFRAALSANPNDADALGGMGIVRLRKSEFAQARD 175 Query: 133 ----------ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 ++ A + + + R ++ RI A Sbjct: 176 LLTRASRIGGAGKWAEALQSARFYADLDSARTALDKGDLAQAERI-----ATALTQSDFR 230 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 A V +V ++ ++ A Q K +A + D GD Sbjct: 231 DKGPAVSVLASVYERQ---GRYNEAAELYRQLGKAGAGAATAQASATRNEARAALDAGDA 287 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYTH 301 + ++ + + A L Q + + + ++ + + P +Y Sbjct: 288 ARAEQLLRAAMGNAPDDPWVAYDLAGLLQQQGRVAEQDALVRQLSYSEKAEP----LYAA 343 Query: 302 LLSENTVGKLKRALRLEEINKE---SVESLVIVS----KIALEMGSIDQAHAKAMLA--- 351 L + G+ A + E + E ++ + A Sbjct: 344 ALILDRAGRTGDAQAVAARIPEGQRTAEMRNFIAGLGISATIAQAKAAGARGAQGQGLAM 403 Query: 352 MKIAPRKEIFLL--LAQIEQA--NSHNTDKILYWTQSALHAMP 390 ++ A + + Q + AL A Sbjct: 404 LRQASEMRGLSADRMGALAQGMLELGDARGAGQLAAQALDAPA 446 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 2/90 (2%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A A + + E L L ++ + A + M+L A Sbjct: 507 AGQFAPAFDLLQAAWNDAPGNEEILSAL--ARLYQSGGLNAQAAQTFRMLLAQKPADRDA 564 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD 186 + L + GD+ +A+ A +A+ P Sbjct: 565 MVGLIDTASASGDMETARAVAQQAIQTHPA 594 >gi|262304953|gb|ACY45069.1| acetylglucosaminyl-transferase [Abacion magnum] Length = 288 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLSPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYTEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIPGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYKTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + H + L L I + A L++ A Sbjct: 34 GQVAEAEECYNTALRLSPTHADSLNNL--ANIKREQGYTEEATRLYLKALEVFPDFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 92 SNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIPGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAITSYKTALKLKPDFPDAYCNLAHCL 200 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 52/176 (29%), Gaps = 6/176 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A E L++ T ++ +L G A R KAL++ PD Sbjct: 27 ANALKEKGQVAEAEECYNTALRLSPTHADSLNNLANIKREQGYTEEATRLYLKALEVFPD 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIPGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 ++++ A A +A + K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYKTALKLK--PDFPDAYCNL 196 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G + A+ AL +SP + A + + Sbjct: 26 LANALKEKGQVAEAEECYNTALRLSPTHADSLNNLANIKREQGYTEEATRLYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ A + +G + + E++++ A +L A Sbjct: 86 DF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIPGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N + ++ + ++ ++ Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAITSYKTALKLKPDFPDAYCNLA 197 >gi|220934718|ref|YP_002513617.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996028|gb|ACL72630.1| TPR repeat-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 397 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 36/306 (11%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P R A+ L + + G L+ A+ + ++ Sbjct: 83 GEVDRAIRIHQNLIARPNLEPRQRANALLELGRDYMKAGVLDRAEGLFRELINTGYLEAE 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + Y KEW RAI ++ + E A + GD + Sbjct: 143 AYGRLRALYEQEKEWERAIWAAEHLRRFSAEPQYEHIAHYHCELGEQAFRNGDPARAASH 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIA-------- 296 A ++L N ASI +++ R+A +LE+ HP+ A Sbjct: 203 ARKALSSDRNCARASILLGDLAVAEQDDRQALKHFSRVLEQ------HPDFAILVLDRVR 256 Query: 297 NIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y L + L + ++ ++ ++ AL + + + Sbjct: 257 AAYARLNDNTGYERF-----LARLREPDACQTTLLAHIDALHAEGREAEVDQLIDHELSR 311 Query: 356 PRKEIFLLLAQIE-QANSHNTDKILYWTQSALHAMPD-----PLWIS-DDGYLSSVWLPL 408 + + L A ++ Q+ A HA+ PL+ G+ S Sbjct: 312 GKLTLPALQAYLKIQSGRAEDTAAGEVLNRAAHALEHYLQLRPLYRCNHCGFSSRSHFWC 371 Query: 409 SPISKT 414 P Sbjct: 372 CPGCHQ 377 >gi|148264413|ref|YP_001231119.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146397913|gb|ABQ26546.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 860 Score = 50.3 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 18/264 (6%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L+ +I L E++Y A + + + I P + D + A A + + I Sbjct: 602 LKGRIYLQEKKYKDAIKVFDDIEAISPD---LGFRLKIDTCVVMKDFSKAVAQARRFITI 658 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P++ + + Y A+ + + + +AIL++ A KGD Sbjct: 659 KPNSAYGYMVLASVYERQNNVDHALDEVKNGLR--GDGKNVQAILMLGNL--YAKKGDNN 714 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILEKIWKVNPH-PEIANI 298 ++ E++ + A L + KR+A LEK P +A + Sbjct: 715 SAMKAFEEAVSKKPDFAPAYFAQGALLDAAGNKREAIKKYREALEKSEDFVPALNNLAYL 774 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y + ++ A+ +++ + + + + L+ G +A A ++ P Sbjct: 775 YADGYG-SKQDAVRLAVTAFKLDSGNPAIMDTLGYVLLKNGRNAEALKLLERAARLLPAD 833 Query: 359 EIFL--LLAQIEQANSHNTDKILY 380 LLA + + + K Sbjct: 834 ANVRNHLLAAFKA--NGDQSKTKQ 855 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 4/125 (3%) Query: 127 VQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDI 183 Q AL A +K L+ A+ +L Y + G A R A A + Sbjct: 736 AQGALLDAAGNKREAIKKYREALEKSEDFVPALNNLAYLYADGYGSKQDAVRLAVTAFKL 795 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDM 242 P + + + + + A+ L + + + N +L ++ + K Sbjct: 796 DSGNPAIMDTLGYVLLKNGRNAEALKLLERAARLLPADANVRNHLLAAFKANGDQSKTKQ 855 Query: 243 IASYH 247 + H Sbjct: 856 QQTLH 860 >gi|197123887|ref|YP_002135838.1| hypothetical protein AnaeK_3496 [Anaeromyxobacter sp. K] gi|196173736|gb|ACG74709.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K] Length = 638 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 70/209 (33%), Gaps = 11/209 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+GD A+R +AL P + V A+ + A+ L R R Sbjct: 150 RLGDREGAERDLRRALAQRPSSGAVRIALGTLLRRRGAIAEAVALLEPAAAAGSNEERAR 209 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVIL 283 A++ + + A + + +++ + + A++ + +A +L Sbjct: 210 ALVALGAAHLAAGR--RAEAGRAFEQAVLYAPARVEIRLGVARAWLGGDAGDAERALSVL 267 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + P H + + + G + R ++ + + V ++AL Sbjct: 268 ARAADLAPDVPAVHAALGRA--RERTGDDAGAAEAYERALRLDPSNRYARRRVLRLALAA 325 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +A +A + P LA + Sbjct: 326 RDFARARHEADRLVADGPEVAEHHFLAAL 354 >gi|167918851|ref|ZP_02505942.1| hypothetical protein BpseBC_09870 [Burkholderia pseudomallei BCC215] Length = 1451 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 72/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + A+ Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSAS-------PDAARAYLDR 826 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 947 LERRDDAIAA--LQRALE 962 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + A +A+ ++PD + + ++ A++ + ++ + + Sbjct: 877 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 936 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ A + + D IA+ A+E A + + + KA + + Sbjct: 937 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 992 Query: 285 KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + V H E+A+ Y +L + + L+RA EI + E+L + + Sbjct: 993 R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1047 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ A+ I + + LA Sbjct: 1048 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1076 >gi|224535852|ref|ZP_03676391.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus DSM 14838] gi|224522575|gb|EEF91680.1| hypothetical protein BACCELL_00716 [Bacteroides cellulosilyticus DSM 14838] Length = 317 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 10/231 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + A + L + + L + L+ A + PD Sbjct: 37 AQRMGRPDYAIKCFTEALALQE-DFETMSYLSQVYIQTNALSEAHELLERMAKQEPDHTS 95 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + L +++ + QK +E N A L+ R+ + D G I S Sbjct: 96 TFLTLANVCYLQEDYQE-MADAAQKAIEIEEGNAM-AHYLLGRAKQGMDDG--IMSIAHL 151 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 +++ L D+ A + A++LI + ++A ++ I +P E A + + G Sbjct: 152 TKAIVLKDDFTEARLLRAEALIKMQQYKEATEDIDAILSQDPDEE-AALLLRGKVKEAAG 210 Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + A + E+N + ++ + + ++ + +A A A+++ P Sbjct: 211 QQEEAETDYRYVTELNPFNEQAFLCLGQLYIVQKKYPEAIALFDEAIELNP 261 >gi|167845602|ref|ZP_02471110.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei B7210] gi|254197877|ref|ZP_04904299.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] gi|169654618|gb|EDS87311.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] Length = 1451 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 72/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + A+ Sbjct: 774 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSAS-------PDAARAYLDR 826 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 827 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 886 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 887 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 946 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 947 LERRDDAIAA--LQRALE 962 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154 H+ LA + Q ++ LL ++AL ++ A + E + + Sbjct: 880 HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 937 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + R D +A + +AL+++ P VQ Y+ +++ +A+ + Sbjct: 938 ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 992 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + N D + +L++ ++ A L + Sbjct: 993 RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 1050 Query: 275 KKRKAEVILEKI 286 + ++E +L + Sbjct: 1051 RLAESEEVLRRA 1062 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A+ Y +A+ + PD ++ A + + A + + + L Sbjct: 817 PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 872 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +AR D + A +++L + A + A+ + +A E+ Sbjct: 873 LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 927 Query: 290 NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P+ Y +L ++ + L+RAL L + ++ + V + L Sbjct: 928 EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 984 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 D+A A + + + N D+ + AL P Sbjct: 985 DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 1033 >gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine bacterium 560] Length = 723 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 89/262 (33%), Gaps = 15/262 (5%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF 155 + I A +++ F NE L+Y + Q ++A + E + P E Sbjct: 24 SGKINEAIDAIKVLTKD--FPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEV 81 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y+L +G L++A + L ++P+ + ++ A+ + Sbjct: 82 N-YNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAI 140 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 ++ A + +L+ G + + +++ + + +L + Sbjct: 141 AIKPDY--AEAHNNLGNALKEL--GQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQ 196 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVI 330 +A E+ + + +N Y +L + +K + I + E+ Sbjct: 197 LDEAVKSYEQAIAIQS--DFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNN 254 Query: 331 VSKIALEMGSIDQAHAKAMLAM 352 + +G +D+A A+ Sbjct: 255 LGNALQGLGQLDEAVKSYEQAI 276 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 74/236 (31%), Gaps = 25/236 (10%) Query: 134 RQYNIAHEKLE-MMLQIPATREF------AVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q ++A + E + P E A+ L G L+ A + +A+ I D Sbjct: 161 GQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGL-------GQLDEAVKSYEQAIAIQSD 213 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + +++ A + +L+ G + + Sbjct: 214 FSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYD--EAHNNLGNALQGL--GQLDEAV 269 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301 +++ + + A L + A +K + P H + Sbjct: 270 KSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAVRSYKKAIVIKPDYAKAHNNLGIALQD 329 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L +T +K + I + E+ + ++G ID A A+ I P Sbjct: 330 LGQMDTA--VKNLEKAIAITPDFAEAHHNLGIALQDLGQIDAAVKGYEKAIAIKPD 383 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 11/229 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Q + A + E +L + A +L + L++A + KA+ I PD Sbjct: 93 GQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDYAEAHNN 152 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ + ++ + +L+ G + + +++ Sbjct: 153 LGNALKELGQLDVAVKSYEKAIAIKPDF--AETHNNLGNALQGL--GQLDEAVKSYEQAI 208 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308 + + A L + A EK + P H + N L + Sbjct: 209 AIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEA 268 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +K + I + + + + E+G +D A A+ I P Sbjct: 269 --VKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAVRSYKKAIVIKPD 315 >gi|332980817|ref|YP_004462258.1| hypothetical protein Mahau_0218 [Mahella australiensis 50-1 BON] gi|332698495|gb|AEE95436.1| Tetratricopeptide TPR_1 repeat-containing protein [Mahella australiensis 50-1 BON] Length = 230 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 43/198 (21%) Query: 61 VSRFFLSCPAMLFHMLHKRNYDK----GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 + + F L+ +K+ Y L G++ + + A ++ V ++ Sbjct: 11 MLQAFFKRSEKLYTWFYKQAVKHHTTNAYALLSYGIIKLNEGDYQTADELFKQVLKKKKL 70 Query: 117 H---------NEYLVY-----------LLEV--QIAL-------------AERQYNIAHE 141 + + L +LE Q + Y A Sbjct: 71 NWTIDKIARVDRALTQWKLGNLDRAIEILEAVCQEYERADSFATLAYFYILKGDYEKAAL 130 Query: 142 KLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 E L+ A+ Y + R GD A+ Y KALD P+ P + Sbjct: 131 YNEKALEEEEDHPPALDNYGQMY--YRQGDYEKAKEYFQKALDKKPNLPDSLYYMGCIAA 188 Query: 200 LAKEWSRAITFLNQKKKN 217 A+ +LN+ ++ Sbjct: 189 EQGRRDEALEYLNKALQS 206 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 16/165 (9%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW-----SRAITFLNQKKKNA 218 GD +A + L W + + + +W RAI L + Sbjct: 48 KLNEGDYQTADELFKQVLKKK-KLNWTIDKIARVDRALTQWKLGNLDRAIEILEAVCQ-- 104 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E+ R + +A KGD + ++L+ ++ A + Q K Sbjct: 105 -EYERADSFATLAY--FYILKGDYEKAALYNEKALEEEEDHPPALDNYGQMYYRQGDYEK 161 Query: 279 AEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINK 322 A+ +K P+ P+ + + + +R LE +NK Sbjct: 162 AKEYFQKALDKKPNLPDS----LYYMGCIAAEQGRRDEALEYLNK 202 >gi|90424611|ref|YP_532981.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisB18] gi|90106625|gb|ABD88662.1| TPR repeat [Rhodopseudomonas palustris BisB18] Length = 767 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 74/250 (29%), Gaps = 13/250 (5%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + ++ L+ L I + + A + I + +L + Sbjct: 170 ARDPTSHDALLNL--GNILQDQGKRAEAIGIYRRAVAIEPSFAAGHRNLALALAQHQQPE 227 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A + +A+ + P+ A+ + + A+ A + +L Sbjct: 228 AALQACHRAIALQPEVVESHMALAEILEGLGRTAEALASYRDALALAPD----ETAVLCQ 283 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A +L+ N A +L S ++ +A ++ ++P Sbjct: 284 IGIALHRLDQFAEAIDVATAALRSAPNHADAVKLLGLALYSSDRFAEALDAYRRLSALDP 343 Query: 292 -HP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +P +I L + + I + L + I G + + A Sbjct: 344 ENPAVLNDIGACLFKLERYDAA--IAACESAIAIKPDHAPGLTNLGIIFEARGEFEASAA 401 Query: 347 KAMLAMKIAP 356 A+ P Sbjct: 402 MLRRAIAADP 411 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 71/237 (29%), Gaps = 48/237 (20%) Query: 167 IGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD + ++ + P + L E A+ Q N Sbjct: 52 AGDRAAQGAALLSRVFGLDPGNAHAYATLGDALALKGEREGAVAAFQQ----GAALRPNH 107 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI-------------- 271 A L + + D G + + ++ L ++ A A+ L Sbjct: 108 AGLHLKLAAALQDLGRLDEAAATCRRAVALDPDATQARFRLARILTAQRDMAAAADAYRA 167 Query: 272 --------------------SQNKKRKAEVILEKIWKVNP-----HPEIANIYT-HLLSE 305 Q K+ +A I + + P H +A H E Sbjct: 168 LIARDPTSHDALLNLGNILQDQGKRAEAIGIYRRAVAIEPSFAAGHRNLALALAQHQQPE 227 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + RA+ L E VES + +++I +G +A A A+ +AP + L Sbjct: 228 AALQACHRAIAL---QPEVVESHMALAEILEGLGRTAEALASYRDALALAPDETAVL 281 >gi|291415216|ref|XP_002723850.1| PREDICTED: PRP6 pre-mRNA processing factor 6 homolog [Oryctolagus cuniculus] Length = 937 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 104/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 575 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 632 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILL------IARSLE 235 +P++ + A V+ E+ RA L + + +A +++ L A + E Sbjct: 633 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGDTAAAQE 692 Query: 236 NADK----------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 +++ G + + LK C +S + ++ Sbjct: 693 LSEEALRHYEDFAKLWMMTGQMQEQQGLTEKARDAYTQGLKKCPHSTPLWLLLSRLEEKI 752 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S V+ Sbjct: 753 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 810 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 811 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 868 Query: 391 D 391 D Sbjct: 869 D 869 Score = 45.3 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 284 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 340 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 341 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 392 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 393 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 445 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 446 RKVLNKARENIPTDRHIWVTAAKLEEA-NGNTQMVEKIIDRAITSLR 491 >gi|87309637|ref|ZP_01091771.1| hypothetical protein DSM3645_02458 [Blastopirellula marina DSM 3645] gi|87287401|gb|EAQ79301.1| hypothetical protein DSM3645_02458 [Blastopirellula marina DSM 3645] Length = 840 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 91/305 (29%), Gaps = 57/305 (18%) Query: 128 QIALA---ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 Q A A +L + A++ L G A + +A++I Sbjct: 19 QAAFQLHRAGDLAAAERTYRQILIDTSKDLNALHLLGLNLHEQGKDREAVVFLEQAVEIG 78 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLI----------- 230 P + ++ + + A + + +E RN A + + Sbjct: 79 PTIGVLYNSLGVARMALGDLRIAESCFRKAISLDSACEEARRNLAAVSLKLQGQTSVPKS 138 Query: 231 --ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 A S GD + + L + + A I A+ + + K R+ +L + + Sbjct: 139 PEASSRSTVAIGDSEQAEQILRQRLGEFPDDLNAYIKLARHWMERGKTREVIDLLSEPVE 198 Query: 289 VNPHP-EIANIYTHL-----LSENTVGKLKR----------------------------- 313 P E+AN + E KR Sbjct: 199 RFPQSVELANCFGEAFGQENRHEEAEQIFKRLLERFPENVTAHVNYGVSQLAQERASEAV 258 Query: 314 --ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQA 370 R E+N E + ++++ + D A A+++ P L+ LA +E+ Sbjct: 259 TSFERALELNPEFFRAYLLIAVSRRQSQQFDAAEMALQRALELRPGSSEALVELAHLERL 318 Query: 371 NSHNT 375 + Sbjct: 319 RGNPQ 323 >gi|124022005|ref|YP_001016312.1| hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT 9303] gi|123962291|gb|ABM77047.1| Hypothetical protein P9303_02941 [Prochlorococcus marinus str. MIT 9303] Length = 1676 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 99/275 (36%), Gaps = 19/275 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148 GL++ ++ A ++ Y + L I + A L+ Sbjct: 108 GLIAKRQGDLFAAEQLVKRACDLDQSFAPYHMNL--GGIYKDLGNLDQALASTLKSLELQ 165 Query: 149 -IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 T + +Y +G+L+ A K+L++ PD P + Y +A Sbjct: 166 PDNPTAHMNLGGIYK---DLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQA 222 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + + + LI D G++ + ++SL+L ++ A + Sbjct: 223 LASTLKSLELQPD----NPTALINLGGIYKDLGNLDQALASTLKSLELQPDNPTAHMNLG 278 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322 +A K ++ P H + IY L + + L L+ E+ Sbjct: 279 GIYQDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQA--LASTLKSLELKP 336 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ + + + I ++G++DQA A + ++++ P Sbjct: 337 DNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPD 371 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 96/267 (35%), Gaps = 19/267 (7%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREF 155 L + + S + + ++ I + A L+ P T Sbjct: 591 GNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLELKPDNPDT-LI 649 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + +Y +G+L+ A K+L++ PD P + Y +A+ + Sbjct: 650 NLGGIYK---DLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSL 706 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + LI D G++ + ++SL+L ++ A + Sbjct: 707 ELKPD----NPTALINLGGIYQDLGNLDQALASTLKSLELKPDNPTAQMNLGGIYKDLGN 762 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +A K ++ P H + IY L + + L L+ E+ ++ + + Sbjct: 763 LDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQA--LASTLKSLELKPDNPTAHMN 820 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + I ++G++DQA A + ++++ P Sbjct: 821 LGGIYKDLGNLDQALASTLKSLELKPD 847 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 107/304 (35%), Gaps = 47/304 (15%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---YLLEVQIALAERQYNIAHEKLEMMLQ 148 L+++ A++ + Q T E + + + A + L Sbjct: 43 LLAL--GQPEKAQQCLAKAHQLDTTDPETIKDIGNIFNA----LQND-AEAIRLYKAALL 95 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTEAVVQQYVLAKEW 204 I A+ +L + R GDL +A++ +A D+ +P + L + Sbjct: 96 INQNYAPAINNLGLIAKRQGDLFAAEQLVKRACDLDQSFAPYHMNLGGIYKDLGNLDQAL 155 Query: 205 SRAITFLNQK-----------KKNAKEWNRNRAILLIARSLENA---------------D 238 + + L + N ++A+ +SLE D Sbjct: 156 ASTLKSLELQPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELQPDNPTAHMNLGGIYKD 215 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HP 293 G++ + ++SL+L ++ A I +A K ++ P H Sbjct: 216 LGNLDQALASTLKSLELQPDNPTALINLGGIYKDLGNLDQALASTLKSLELQPDNPTAHM 275 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + IY L + + L L+ E+ ++ + + + I ++G++DQA A + +++ Sbjct: 276 NLGGIYQDLGNLDQA--LASTLKSLELKPDNPTAHMNLGGIYQDLGNLDQALASTLKSLE 333 Query: 354 IAPR 357 + P Sbjct: 334 LKPD 337 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 97/266 (36%), Gaps = 17/266 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156 L + + S + + + I + A L+ T Sbjct: 659 GNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTALIN 718 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +Y +G+L+ A K+L++ PD P + Y +A+ + + Sbjct: 719 LGGIY---QDLGNLDQALASTLKSLELKPDNPTAQMNLGGIYKDLGNLDQALASTLKSLE 775 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + L D G++ + ++SL+L ++ A + Sbjct: 776 LKPDNPTAHMNL----GGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNL 831 Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A K ++ P +P+ + IY L + + L L+ E+ ++ ++L+ + Sbjct: 832 DQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLINL 889 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 I ++G++DQA A + ++++ P Sbjct: 890 GGIYKDLGNLDQALASTLKSLELKPD 915 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 98/268 (36%), Gaps = 19/268 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154 N+ A + + L+ L I + A L+ T + Sbjct: 693 GNLDQALASTLKSLELKPDNPTALINL--GGIYQDLGNLDQALASTLKSLELKPDNPTAQ 750 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + +Y +G+L+ A K+L++ PD P + Y +A+ + Sbjct: 751 MNLGGIYK---DLGNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKS 807 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + L D G++ + ++SL+L ++ I Sbjct: 808 LELKPDNPTAHMNL----GGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLG 863 Query: 275 KKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 +A K ++ P +P+ + IY L + + L L+ E+ ++ ++L+ Sbjct: 864 NLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLI 921 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + I ++G++DQA A + ++++ P Sbjct: 922 NLGGIYKDLGNLDQALASTLKSLELKPD 949 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 83/218 (38%), Gaps = 14/218 (6%) Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + T + +Y +G+L+ A K+L++ PD P + Y Sbjct: 265 ELQPDNPTAHMNLGGIY---QDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNL 321 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 +A+ + + + L D G++ + ++SL+L ++ I Sbjct: 322 DQALASTLKSLELKPDNPTAHMNL----GGIYQDLGNLDQALASTLKSLELKPDNPDTLI 377 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319 +A K ++ P H + IY L +N L L+ E Sbjct: 378 NLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDL--DNLDQALASTLKSLE 435 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ ++L+ + I ++G++DQA A + ++++ P Sbjct: 436 LKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPD 473 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 101/272 (37%), Gaps = 17/272 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156 L + + S + + ++ I + A L+ T Sbjct: 455 GNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 514 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +Y +G+L+ A K+L++ PD P + Y +A+ + + Sbjct: 515 LGGIY---QDLGNLDQALASTLKSLELQPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 571 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + LI D G++ + ++SL+L ++ A + Sbjct: 572 LKPDNPD----TLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMNLGGIYQDLGNL 627 Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A K ++ P +P+ + IY L + + L L+ E+ ++ ++L+ + Sbjct: 628 DQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLINL 685 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 I ++G++DQA A + ++++ P L+ Sbjct: 686 GGIYKDLGNLDQALASTLKSLELKPDNPTALI 717 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 100/267 (37%), Gaps = 19/267 (7%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREF 155 L + + S + + + I + A L+ P T Sbjct: 829 GNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPDT-LI 887 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + +Y +G+L+ A K+L++ PD P + Y +A+ + Sbjct: 888 NLGGIYK---DLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSL 944 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + ++ + ++ D D + ++SL+L ++ A + Sbjct: 945 ELKPD--NPDTLINLGGIYKDLDNLD--QALASTLKSLELKPDNPTAHMNLGGIYKDLGN 1000 Query: 276 KRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +A K ++ P +P+ + IY L + + L L+ E+ ++ ++L+ Sbjct: 1001 LDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQA--LASTLKSLELKPDNPDTLIN 1058 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + I ++G++DQA A + ++++ P Sbjct: 1059 LGGIYKDLGNLDQALASTLKSLELKPD 1085 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 95/266 (35%), Gaps = 17/266 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156 L + + S + + + I + A L+ T Sbjct: 557 GNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 616 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +Y +G+L+ A K+L++ PD P + Y +A+ + + Sbjct: 617 LGGIY---QDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 673 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + LI D G++ + ++SL+L ++ A I Sbjct: 674 LKPDNPD----TLINLGGIYKDLGNLDQALASTLKSLELKPDNPTALINLGGIYQDLGNL 729 Query: 277 RKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A K ++ P +P + IY L + + L L+ E+ ++ + + + Sbjct: 730 DQALASTLKSLELKPDNPTAQMNLGGIYKDLGNLDQA--LASTLKSLELKPDNPTAHMNL 787 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 I ++G++DQA A + ++++ P Sbjct: 788 GGIYKDLGNLDQALASTLKSLELKPD 813 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 11/204 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G AQ+ KA + P + + + + + AI + + Sbjct: 44 LALGQPEKAQQCLAKAHQLDTTDPETIKDIGNIFNALQNDAEAIRLYKAALLINQNY--- 100 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + L +GD+ A+ + L + + +A Sbjct: 101 -APAINNLGLIAKRQGDLFAAEQLVKRACDLDQSFAPYHMNLGGIYKDLGNLDQALASTL 159 Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K ++ P H + IY L + + L L+ E+ ++ + + + I ++G Sbjct: 160 KSLELQPDNPTAHMNLGGIYKDLGNLDQA--LASTLKSLELQPDNPTAHMNLGGIYKDLG 217 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363 ++DQA A + ++++ P L+ Sbjct: 218 NLDQALASTLKSLELQPDNPTALI 241 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 96/266 (36%), Gaps = 17/266 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFA 156 L + + S + + ++ I + A L+ T Sbjct: 761 GNLDQALASTLKSLELKPDNPTAHMNLGGIYKDLGNLDQALASTLKSLELKPDNPTAHMN 820 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +Y +G+L+ A K+L++ PD P + Y +A+ + + Sbjct: 821 LGGIYK---DLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNLDQALASTLKSLE 877 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + LI D G++ + ++SL+L ++ I Sbjct: 878 LKPDNPD----TLINLGGIYKDLGNLDQALASTLKSLELKPDNPDTLINLGGIYKDLGNL 933 Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A K ++ P +P+ + IY L +N L L+ E+ ++ + + + Sbjct: 934 DQALASTLKSLELKPDNPDTLINLGGIYKDL--DNLDQALASTLKSLELKPDNPTAHMNL 991 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 I ++G++DQA A + ++++ P Sbjct: 992 GGIYKDLGNLDQALASTLKSLELKPD 1017 >gi|71667321|ref|XP_820611.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi strain CL Brener] gi|70885962|gb|EAN98760.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma cruzi] Length = 472 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 13/105 (12%) Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +A + + +W AI + ++L R+ Sbjct: 4 AEEADRLKNKGNEAFQ--------EGKWHHAIELYTEAL-----ALHKTPVILCNRAFAY 50 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A+ DA E+L+L + A A + + K ++A Sbjct: 51 LKTELAGAALTDADEALRLDPGYVKAYYRKASAHLYLGKHKEALK 95 >gi|71660285|ref|XP_821860.1| serine/threonine protein phosphatase type 5 [Trypanosoma cruzi strain CL Brener] gi|70887249|gb|EAO00009.1| serine/threonine protein phosphatase type 5, putative [Trypanosoma cruzi] Length = 472 Score = 49.9 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 13/105 (12%) Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +A + + +W AI + ++L R+ Sbjct: 4 AEEADRLKNKGNEAFQ--------EGKWHHAIELYTEAL-----ALHKTPVILCNRAFAY 50 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A+ DA E+L+L + A A + + K ++A Sbjct: 51 LKTELAGAALTDADEALRLDPGYVKAYYRKASAHLYLGKHKEALK 95 >gi|21228903|ref|NP_634825.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1] gi|20907434|gb|AAM32497.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1] Length = 359 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 9/150 (6%) Query: 134 RQYNIAHEKLEM-MLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A E E +L+ P E A + A + AL I PD P Sbjct: 215 GRLEEALETYEKVLLRDPKYAEAWAGKGSVLSALDRK--EEALEAYSSALKIRPDYPEAL 272 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +A + +A++ + + + E L R L ++ + + Sbjct: 273 KAAGNLLFKLGRYEKALSTYDMALQASPE----DPQLWAGRGLVLSELNKQEEALQNCNR 328 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +L+L A + L +++ KAE Sbjct: 329 ALELKPGFNPALEIKVEILSRISRQ-KAEK 357 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 39/139 (28%), Gaps = 14/139 (10%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E+ D +A+++ P V + A+ + Sbjct: 182 LLKEALDAYD---------RAIELEPSFEIVWDNKGVVLAGLGRLEEALETYEKVLLRDP 232 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ A + + + +LK+ + A A L + KA Sbjct: 233 KY----AEAWAGKGSVLSALDRKEEALEAYSSALKIRPDYPEALKAAGNLLFKLGRYEKA 288 Query: 280 EVILEKIWKVNPH-PEIAN 297 + + +P P++ Sbjct: 289 LSTYDMALQASPEDPQLWA 307 >gi|229160569|ref|ZP_04288564.1| hypothetical protein bcere0009_13610 [Bacillus cereus R309803] gi|228622979|gb|EEK79810.1| hypothetical protein bcere0009_13610 [Bacillus cereus R309803] Length = 434 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITHYESLLAEHKVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 DYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKVVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ V + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAVVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 351 PDTQLLWDLAFAKKQLEMYSDALKHYESAYT 381 >gi|157812764|gb|ABV81127.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Narceus americanus] Length = 288 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLSPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGHTEEATRLYLKALEVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + GSI +A A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 53/178 (29%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G + A+ AL +SP + A + + Sbjct: 26 LANALKEKGQVQEAEDCYNTALRLSPTHADSLNNLANIKREQGHTEEATRLYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ A + +G + + E++++ A +L + A Sbjct: 86 DF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S + + ++ + ++ ++ Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGSIPEAIASYRTALKLKPDFPDAYCNLA 197 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A + L++ T ++ +L G A R KAL++ PD Sbjct: 27 ANALKEKGQVQEAEDCYNTALRLSPTHADSLNNLANIKREQGHTEEATRLYLKALEVFPD 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYDQRMKKLVAIVADQLEKNRLPSVHPHH 236 >gi|194290488|ref|YP_002006395.1| protoheme ix synthesis protein [Cupriavidus taiwanensis LMG 19424] gi|193224323|emb|CAQ70334.1| protoheme IX synthesis protein [Cupriavidus taiwanensis LMG 19424] Length = 396 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 52/390 (13%), Positives = 128/390 (32%), Gaps = 19/390 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +RL+ + V+ + + + +V + + S + L++L F + + Sbjct: 1 MRLLFWVAVLFGGAVGLALFTQFNHSNVVLFYPPYRVELSLNLALALLLLIFFVVWTVMS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R P + K AL + ++ A AR + Q Sbjct: 61 TIRHLAEMPRRAAAYRERSRMSKAQAALRESIENLFA--GRFARAERAAREAQSWDDQAQ 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ + A ++ + + + P + + S+ D + A + Sbjct: 119 TAALIGARAAHRMQETDR-RDAWMAQVTDPEREQARLVSMAELLVDARDADGALETIAQL 177 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLEN 236 V ++ + K WS A + + + R + + + A E Sbjct: 178 QSQGARQIHVQRIALRAHQHLKNWSEVLRLARSLEKRNALHPVLALRLKQMAVEAMLEER 237 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + ++ + ++ + + I + AA+ + ++ +A I+E KVN + Sbjct: 238 RHDAEALSEFWRSLSADERRATRI--AEPAARYFAALGRQNEARRIIEDALKVNWDSRLV 295 Query: 297 NIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + + ++++A + + + + + L +A + A+K A Sbjct: 296 LRYADCAVPGHALPQIQQAEKWLAAHPADADLYYTLGVLCLGEKLWGKAQSSFERALKYA 355 Query: 356 P-------RKEIFLLLAQI-EQANSHNTDK 377 R L LA++ E+ + Sbjct: 356 DPDQQRRLRVRTHLALARLFEETERFEDAQ 385 >gi|332307553|ref|YP_004435404.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174882|gb|AEE24136.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 918 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 2/108 (1%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + + A E + +L++ + + + G+ + A A KAL I P+ Sbjct: 779 AEYYAKNGEQDAASEYYQALLELIPEDFVTLNNYANLAIAQGNTSKAVELAQKALKIQPN 838 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 +P+ + + ++S A+T++ KK +A+ N L + L Sbjct: 839 SPYAMDTLGWALFHENKYSDALTYI--KKAHAELPKNNEVTLHLIELL 884 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 106/311 (34%), Gaps = 46/311 (14%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL+ +++ + + S V +T NE L Q + + A + Sbjct: 400 LREGLVKLSSGDQSGIESLESAVELDNTL-NEAWSLL--AQAHMQANEPQKALAVAKRWQ 456 Query: 148 QIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + L ES ++ D A+ KAL + PD ++ K + Sbjct: 457 AVNEVD-----GLVLESYIYQQLNDDTQARGLLDKALSMEPDNFAAMRFLMLLNAREKRF 511 Query: 205 SRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261 S A + K + + + LI ++ D + + + + K + S Sbjct: 512 SEARELAEKLIKTSDNLDGKYQLVLTLINIAIAQNDMASVESLFKSLLNEHKDEETSYTL 571 Query: 262 -ASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----------EIANIYTHLLSENTVG 309 + A Q + +K+ +LE P + Y+ + N Sbjct: 572 QLKVGLATLYNYQGEYQKSLELLE--------PLDDSKDFFVLSALGETYSGMNDFNNAK 623 Query: 310 KLKRALRLEEINKESVESLV----IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 RL ++ S V +++K L+ ++D A A+A LA+ PR + + A Sbjct: 624 --ATFQRLIDVFPRDTRSWVQYVNLLNKFNLQRDAVDSA-ARAELAIPNDPRLTVLSIRA 680 Query: 366 -----QIEQAN 371 IE+A Sbjct: 681 LIRSKAIEKAQ 691 >gi|315186422|gb|EFU20182.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 305 Score = 49.9 bits (118), Expect = 9e-04, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 77/238 (32%), Gaps = 34/238 (14%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 +R + +Y + + + + +Y+ A LE +L+ + Sbjct: 42 EGDFSRAVGAYTQALRFSPHTPRIEYNLARTYIRTGEYDRAEALLEGLLERDPVNTMVLS 101 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L + GD ++A+ + +AL++SP + + + + + S A+ + + + + Sbjct: 102 TLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARLRMEEGDVSAALAYAGEAYEIS 161 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E + +LL+ L + +L K Sbjct: 162 PE---KKEVLLLYAILRLETAPTDEEAVTLGETALSSYP-----------------KDPY 201 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L + ++ A Y L L +N E ++ + +++ L Sbjct: 202 LLRALARAYEA------AQRYADA--------LTLLSTLTSVNPEDPDAFFLRARLRL 245 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 66/237 (27%), Gaps = 41/237 (17%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----------------NAKEWN 222 A PD ++ Y ++SRA+ Q + E++ Sbjct: 21 ASSPRPDLAEAYFSLGNAYYEEGDFSRAVGAYTQALRFSPHTPRIEYNLARTYIRTGEYD 80 Query: 223 RNRAIL-------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 R A+L L + KGD + +L+L + A+ Sbjct: 81 RAEALLEGLLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELSPGDVTILYNLARL 140 Query: 270 LISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV---GKLKRALRLEEINKESV 325 + + A + ++++P E+ +Y L E + + Sbjct: 141 RMEEGDVSAALAYAGEAYEISPEKKEVLLLYAILRLETAPTDEEAVTLGETALSSYPKDP 200 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI------EQANSHNT 375 L +++ A + P + F L A++ E + Sbjct: 201 YLLRALARAYEAAQRYADALTLLSTLTSVNPEDPDAFFLRARLRLLYAGEVKEGLDD 257 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 9/158 (5%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + ++GD + ++L+ ++ A++ I + +AE +LE Sbjct: 29 AEAYFSLGNAYYEEGDFSRAVGAYTQALRFSPHTPRIEYNLARTYIRTGEYDRAEALLEG 88 Query: 286 IWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + + +P +A ++ + +RAL L V L ++++ +E G Sbjct: 89 LLERDPVNTMVLSTLAYLFICKGDPDTAEDFYRRALELS---PGDVTILYNLARLRMEEG 145 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + A A A A +I+P K+ LLL I + + TD+ Sbjct: 146 DVSAALAYAGEAYEISPEKKEVLLLYAILRLETAPTDE 183 >gi|294636812|ref|ZP_06715147.1| TPR domain protein [Edwardsiella tarda ATCC 23685] gi|291089955|gb|EFE22516.1| TPR domain protein [Edwardsiella tarda ATCC 23685] Length = 389 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 79/270 (29%), Gaps = 39/270 (14%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ ++ +D + Sbjct: 83 GEVDRAIRIHQSLMESASLSFEQRLLAVQQLGRDYMAAGLYDRAEEMFSQLVDEADFRLS 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + EW +AI + + KE R A +L+ D+ + + Sbjct: 143 ALQQLLVIHQATSEWHKAIEVAEKLVRLGKEQQRGEIAHFYCELALQAMGSDDLDKAQNL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK--IWKVNPHPEIANIYTHL 302 ++ SI + + + KA +LE+ + P + Y Sbjct: 203 LKKAAAADKGCARVSIMQGRVYQALGEPAKAVTAFAQVLEQDRAFVSEVLPLMEACY--- 259 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351 L + V + L +G + +A A Sbjct: 260 ------------QTLGQAGPWHDFLRRCVEEDAGASAELMLGQVIEAEEGLEAAQIYVSR 307 Query: 352 -MKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ P +F L A + Sbjct: 308 QLQRHPTMRVFHRLMDYHLAE-AEDGRARE 336 >gi|284923560|emb|CBG36655.1| cellulose synthase operon protein C (TPR-repeat-containing protein) [Escherichia coli 042] Length = 1140 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 99/348 (28%), Gaps = 59/348 (16%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-----NKKRK 278 + + D + I SL S + +Q N+ R+ Sbjct: 513 EQVYAYGLYLSGH----DQDRAALAHINSLPRAQWSSNIQELVNRLQSNQVLETANRLRE 568 Query: 279 AEVILEKIWKVNPHP-----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + E + P ++ + + T + L + ++++ ++ Sbjct: 569 SGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAILGLT 627 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ + G A ++ + QA +T Sbjct: 628 EVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 721 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 240 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 294 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 295 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 354 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 355 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 398 >gi|115400781|ref|XP_001215979.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191645|gb|EAU33345.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 936 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 91/265 (34%), Gaps = 37/265 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G+++ A+R +A + +P+ + A V+ A++ +A L ++ A Sbjct: 611 LAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADAQQTDQARELLATARREAG 670 Query: 220 EWNRNRAILLIARSLENADKG-----------------------------DMIASYHDAI 250 + R L N D+ + Sbjct: 671 TDRVWIKSVAFERQLGNVDEALDLVNQGLQQFPKADKLWMMKGQIYEAQNKYPQAREAYG 730 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309 + C S+ + A++ KA +L++ P PE+ + E Sbjct: 731 TGTRACPKSVPLWLLASRLEEKAGAVVKARSVLDRARLAVPKSPELWTESVRV--ERRAN 788 Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A L +E S ++ S+ LE + +A + K+ +F+ +A+ Sbjct: 789 NIGQAKVLMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDNDPILFITVAR 847 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 I +K + W + A+ + D Sbjct: 848 IFWGERR-LEKAMTWFEKAIVSDSD 871 >gi|228907251|ref|ZP_04071111.1| hypothetical protein bthur0013_14200 [Bacillus thuringiensis IBL 200] gi|228852391|gb|EEM97185.1| hypothetical protein bthur0013_14200 [Bacillus thuringiensis IBL 200] Length = 434 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 135 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAIIYYESLLAEHNVMGGVVIALR-LAET 193 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 194 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 248 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 249 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKVVEAEEVL 308 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 309 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAIVERAIDSGE 350 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 351 PDTQLLWDLAYAKKQLEMYSDALKHYESAYT 381 >gi|169607899|ref|XP_001797369.1| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] gi|160701516|gb|EAT85665.2| hypothetical protein SNOG_07014 [Phaeosphaeria nodorum SN15] Length = 1230 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 8/160 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y A + + L+I + L C+I D K + P A Sbjct: 471 KNYEEAIKAYKFALKIEPNSLNILRDLALLQCQIRDFEGYIESRRKMMQERPQLRQNWTA 530 Query: 194 VVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + LA ++ A L K+ + + + + +++ A+ GD + Sbjct: 531 LAIAHHLAGNYAEAENILKTYEETLKQTPPKSDLEHSEATLYKNMIIAESGDTERALAHL 590 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 E ++ + A A+ L+ + +A EK ++ Sbjct: 591 EEVVRNSLDRTSALEMKAQYLLQLGRNEEA----EKAYRT 626 >gi|42521762|ref|NP_967142.1| TPR domain-containing protein [Bdellovibrio bacteriovorus HD100] gi|39574292|emb|CAE77796.1| putative TPR domain protein [Bdellovibrio bacteriovorus HD100] Length = 240 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 19/228 (8%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALD 182 L E + Y +A L ML + TR VY L G + A + +AL+ Sbjct: 9 LSEARGYFINGNYKMAEPILNQML-LQNTRNPEVYQMLATIFYDKGQFSKAIKTFRRALE 67 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGD 241 I P + + ++ L+ + + K+ + + + ++ + D Sbjct: 68 IDPTYTDASVGLSIILNDLGKYDEGKQVFLDAQSQLEKKSGKQDPFVDEKIASKHEELAD 127 Query: 242 -------MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292 + +++ KL ++ A+ + + +A L+ + + PH Sbjct: 128 LYYQYKRYNEALEQLLKAQKLSSRKAEITMRIAEVHVQLGQGDRAIKDLKSLIREYPHLI 187 Query: 293 PE---IANIYTHLLSENTVGKLKRALRLEEINKESVES--LVIVSKIA 335 P + IY + S N ++ + + + E+ + +++ A Sbjct: 188 PARLKLGAIYYN--SNNIAEATEQWENILIRDPQHPEALRYLKMAQAA 233 >gi|289615913|emb|CBI57264.1| putative CDC27 protein [Sordaria macrospora] Length = 815 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 92/285 (32%), Gaps = 22/285 (7%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-------FAVYS 159 +Y+S + + V + + Y A + + + I TR ++ Sbjct: 508 AAYISLPRSHQDTPWVLAQMGRTQYEQANYAEAEKYFKRLRVIAPTRLEDMEVYSTVLWH 567 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E+ A + +D D+P A+ + LA + +A+ + + Sbjct: 568 LKKETELS-------FLAHEMIDSVWDSPEAWCALGNAWSLAYDHEQALRCFKRATQLDP 620 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ A + E+ + + + ++ A + KA Sbjct: 621 KF----AYAYTLQGHEHVENEEYDKALTAYRHAIAADKRHYNAYYGIGRVYEKLGNYDKA 676 Query: 280 EVILEKIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 ++P H + + + L R E+ + + + ++ L Sbjct: 677 LSHYHAASVIHPTHAVLICCMGSVLHKQKQIKQALPYFTRAAELAPRAPDVRLKKARALL 736 Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 +MG A + M+ +AP R ++ LL ++ + + + Sbjct: 737 QMGQTKAAQTELMILKDLAPDRAQVHFLLGKLSKTLHDKKSAVRH 781 >gi|237731704|ref|ZP_04562185.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226907243|gb|EEH93161.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 389 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 92/282 (32%), Gaps = 57/282 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL VQ +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 R+G + ++Q Y EW +AI + Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L+ DM + + NS SI + + Sbjct: 167 LVKLGKDKQRIEIAHFYCELALQQMGSDDMDRAMTLLKKGAAADKNSARVSIMMGRVYMV 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIA--------NIYTHL-LSENTVGKLKRALRLEEINKE 323 + KA L+++ ++ E+ + Y HL ++ L+RA E N Sbjct: 227 KGDYAKAVESLQRV--ISQDKELVSETLEMLQSCYQHLGKNDEWAEFLRRA---VEENTG 281 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 + + ++++ I D A ++ P +F L+ Sbjct: 282 AA-AELMLADILEAREGTDTAQVYITRQLQRHPTMRVFHKLM 322 >gi|319786990|ref|YP_004146465.1| hypothetical protein Psesu_1387 [Pseudoxanthomonas suwonensis 11-1] gi|317465502|gb|ADV27234.1| tetratricopeptide repeat protein [Pseudoxanthomonas suwonensis 11-1] Length = 392 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 94/302 (31%), Gaps = 25/302 (8%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T I AP Sbjct: 88 GEVDRAIRLHQGLVQRSDLSDAQRVQALLALGEDYMKSGLLDRAETVFTDLARIDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W RAI + ++ + + A + GD+ ++ Sbjct: 148 ALRHLIGIYQAERDWERAIENAMRFEEATGEPMGKLVAQFECELAERLRGNGDLASARAA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + + A I + A E+ + +P P + Y + Sbjct: 208 IARAYQADATCVRAGILEGRIESDAGNPEGAIRAFERAARHDPDYLPEVLPGLLAAYAQV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID--QAHAKAMLAMKIAPRKEI 360 + + + L E+++ +++ L QA +K P Sbjct: 268 -GDTSGAR----AFLAEMSEHYRGIAPVLALTRLIEQQEGAVQARDYLGRQLKDRPSVRG 322 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDD---GYLSSVWLPLSPISKTL 415 L + A ++ L+ + + +P + G + W P K Sbjct: 323 EAALIDLTLAVGADSTATLHDLKHITDQLLVRNPSYRCTRCGFGARTHHWQ--CPSCKEW 380 Query: 416 CY 417 Sbjct: 381 GT 382 >gi|229845050|ref|ZP_04465186.1| hypothetical protein CGSHi6P18H1_00824 [Haemophilus influenzae 6P18H1] gi|229812022|gb|EEP47715.1| hypothetical protein CGSHi6P18H1_00824 [Haemophilus influenzae 6P18H1] Length = 396 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 94/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + LV + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLVKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVEILENVLEQNPDYTGEILSP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + + K+ E A AK + P IF + QI+ A Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKNPSTLIFHRFMQYQIDDAEDG 339 >gi|303276312|ref|XP_003057450.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461802|gb|EEH59095.1| predicted protein [Micromonas pusilla CCMP1545] Length = 685 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 26/250 (10%) Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYA-------- 177 Q ++ A + + +P + AVY + + + A Sbjct: 268 AQFEELCKEPERARAIYKYALDNLPKEKAQAVYQNFMTFEKQYGNEAGIDDAVLGKKRVE 327 Query: 178 -TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIA 231 + P + A E +A + N R L I Sbjct: 328 YEDEVRKDPTNYDAWFDYTRLEENAGEIEKAREVYERAIANVPPATAKQFWRRYIYLWIN 387 Query: 232 RSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKI 286 +L E + GD+ + E LKL + + A++ I Q + A IL Sbjct: 388 YALFEELEAGDLERAREVYRECLKLIPHKVFSFSKIWVMASEFEIRQKRLDAARKILGLA 447 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSID 342 + P +I +Y + E +G + R L + + + + +++ +G + Sbjct: 448 IGLAPKDKIFKVYIDM--EMQLGNVDRCRTLYQKHLEIAPHNCFTWEKFAELENSLGETE 505 Query: 343 QAHAKAMLAM 352 +A A +A+ Sbjct: 506 RARAIFEIAI 515 >gi|225850059|ref|YP_002730293.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] Length = 559 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 15/206 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ +A A +++ V + ++E L L ++ QY A + L + + Sbjct: 307 GMAYESAQRYKKAEEIYLKVLKLEPENSEILERL--AEVYTRTGQYEKALDVLNRLYSLD 364 Query: 151 ATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 L + + G+L++A Y +A I+ P + Y +W +A Sbjct: 365 PRD---YRVLLIMADIENKRGNLDAALSYIQEAKSINDKDPTIYFFEGIYYEKLDQWDKA 421 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-- 265 + + ++ A+ SL D+ + ++L+L +S A+ Sbjct: 422 EEAFKKALELRPDFP--DALNYYGYSL-IIRNRDIDRAMDMIRKALELVPDS--AAYLDS 476 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291 + + KA +++ ++ P Sbjct: 477 LGWGYFKKGEYLKALKYIKQAYQKAP 502 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 96/299 (32%), Gaps = 67/299 (22%) Query: 139 AHEKLEMMLQIPATREFAVYSLYF----ES---------CRIGDLNSAQRYATKALDISP 185 A + + + + E A+ + E+ + D A+ K ISP Sbjct: 102 ATKIYKNLGNLDKAEEVALKGIERFPDNEAILSQLVDVYLKKNDAEKAKEVLFKIAKISP 161 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P V + + Y+ AI L + + + A +L+ + Sbjct: 162 KKPRVYYTLARIYLFQNNKEEAIKHLKKALEIEPLY--QPAYVLLGEL--YLQDRKFKEA 217 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------------- 291 ++ L+ N + A + + ++ +KAE I+ +I K++P Sbjct: 218 EKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRIVKIDPSNKDALLKKFLLYL 277 Query: 292 ------------------HPE-------IANIYTHLLSENTVGKLKRALRLE----EINK 322 P+ + Y + + K+A + ++ Sbjct: 278 RENKGEEIIRELEELAKEEPDNPTVLSILGMAY------ESAQRYKKAEEIYLKVLKLEP 331 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILY 380 E+ E L ++++ G ++A + PR + L++A IE + + Y Sbjct: 332 ENSEILERLAEVYTRTGQYEKALDVLNRLYSLDPRDYRVLLIMADIENKRGNLDAALSY 390 Score = 45.3 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 11/207 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + A + + PD P + Y +A + + + Sbjct: 70 LLALHAKKKDEAVKILEDFVKRFPDKPETYSFATKIYKNLGNLDKAEEVALKGIERFPDN 129 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +L K D + + K+ A+ + QN K +A Sbjct: 130 E----AILSQLVDVYLKKNDAEKAKEVLFKIAKISPKKPRVYYTLARIYLFQNNKEEAIK 185 Query: 282 ILEKIWKVNP--HPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L+K ++ P P + +Y K+ L++ E + +E+L + ++ + Sbjct: 186 HLKKALEIEPLYQPAYVLLGELYLQDRKFKEAEKV--YLKVLEKDPNDLEALNRLFQVYV 243 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + +A +KI P + LL Sbjct: 244 QADQFKKAEEIINRIVKIDPSNKDALL 270 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 8/157 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA-TREF 155 N+ A + +Y E Q++ A E + L+ P Sbjct: 382 GNLDAALSYIQEAKS--INDKDPTIYFFEGIYYEKLDQWDKAEEAFKKALELRPDFPDAL 439 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK- 214 Y Y R D++ A KAL++ PD+ +++ Y E+ +A+ ++ Q Sbjct: 440 NYYG-YSLIIRNRDIDRAMDMIRKALELVPDSAAYLDSLGWGYFKKGEYLKALKYIKQAY 498 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +K + + + +L N ++ + Y A+E Sbjct: 499 QKAPDDPVVTEHLAEVEEALGNKEEA--LKLYRKALE 533 >gi|149923188|ref|ZP_01911601.1| hypothetical protein PPSIR1_34173 [Plesiocystis pacifica SIR-1] gi|149815962|gb|EDM75478.1| hypothetical protein PPSIR1_34173 [Plesiocystis pacifica SIR-1] Length = 962 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 101/326 (30%), Gaps = 33/326 (10%) Query: 77 HKRNYDKGYKALYT--GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 R +K L++ A N A S + E L + Sbjct: 76 EARKREKPADPKTRDAALVAAAHGNPEGAATFLSEHLKSKPGDTEAAFAL--ARAQRLLG 133 Query: 135 QYNIAHEKLEMML------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A E LE + A + L GD+ A++ L + P Sbjct: 134 RLDAAQETLEAARAQAKKSKDKAVEAQVLRRLAALREVHGDIAGAEKLIVDGLGLDPTNL 193 Query: 189 WVTE-----AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + A++ V ++ I L + + + +L + Sbjct: 194 LLQGERVRLALISGKVQERDIRGLIDGLYDAYGDGTAQTAEQILGASYAAL---AERAFK 250 Query: 244 ASYHDAIESLKLCDNSI------MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296 ++ E+ L S ++ A+ + + K +A + ++ + +P +PE Sbjct: 251 STNRLMQEAENLAPASEGSELGDEIAVRYAELFLEKYKPSEAAQTVAQVLERDPWNPEAL 310 Query: 297 NIYTHLLSEN----TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + ++ + A ++N + E+ +++ +AL G D+A + + Sbjct: 311 ALMARIALDDFRLGPASRA--AEEALQVNPSNAEAHTVLAWVALIEGRRDEARERVTDHV 368 Query: 353 KIAPRKEI--FLLLAQIEQANSHNTD 376 + ++A + Sbjct: 369 LTLNPAHVDGQAVMAALAIYERDEAA 394 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 83/280 (29%), Gaps = 60/280 (21%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + EK P TR+ A+ + G+ A + ++ L P Sbjct: 69 TAEMATEEARKREK----PADPKTRDAALV-----AAAHGNPEGAATFLSEHLKSKPGDT 119 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENADKGDMIASY 246 A+ + L A L + AK+ A +L + GD+ + Sbjct: 120 EAAFALARAQRLLGRLDAAQETLEAARAQAKKSKDKAVEAQVLRRLAALREVHGDIAGAE 179 Query: 247 HDAIESLKLCDN-------SIMASICAAKSLIS--------------QNKKRKAEVILEK 285 ++ L L + ++ + K + AE IL Sbjct: 180 KLIVDGLGLDPTNLLLQGERVRLALISGKVQERDIRGLIDGLYDAYGDGTAQTAEQILGA 239 Query: 286 IWKV-------------------NPHP-------EIANIYTH--LLSENTVGKLKRALRL 317 + P EIA Y L + ++ Sbjct: 240 SYAALAERAFKSTNRLMQEAENLAPASEGSELGDEIAVRYAELFLEKYKPSEAAQTVAQV 299 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E + + E+L ++++IAL+ + A A A+++ P Sbjct: 300 LERDPWNPEALALMARIALDDFRLGPASRAAEEALQVNPS 339 Score = 37.2 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 77/238 (32%), Gaps = 23/238 (9%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGD 169 + + L+EV A E + A + LE ++Q TR L ++GD Sbjct: 740 KAQDDPRVQTLMEVMKAGQEGDFESARKGLEALVQGKGDGAQTRLMLGNVL----EQLGD 795 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A + KA S +A A+ + + L + ++ Sbjct: 796 DKQAAKQYEKAASFSVEALEPLMALAALARKQADVKGELDVLERVLAIDGM-----SLEP 850 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R+L A + + + + A A+ K++A+V+L++ Sbjct: 851 ALRALVLAVASGDKRAEAFSDRASAIAPLHPTALAGASVVAFDAKDKKRAQVLLDESMVT 910 Query: 290 NPHPEIANIYTHLLSENTVGKLK--RALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P+ A + + + +L R L ++ES ++ +A Sbjct: 911 ALRPD-AGLDVVVSAAVAADRLDDPRVKDLA---PRALESK----ELPKAARKRLEAR 960 >gi|325185760|emb|CCA20240.1| Mitochondrial Protein Translocase (MPT) Family puta [Albugo laibachii Nc14] Length = 1050 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 16/194 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA----HEKLEMMLQIPATR 153 + A K+ Y YL + Q AL + Y+ A + + IP Sbjct: 827 GDFEEAYKL--YDEALILDCRSPDAYLHKGQTALLQGSYSKAVEWLRRTMARSVAIPIIH 884 Query: 154 EFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 +Y + R G + A +A + PD+ + + ++++A+ Sbjct: 885 V-----IYATALYRSGSILQANDTFREACVLFPDSAEIHLFYGEILADQGDYAKAMQHFV 939 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 E + + + ++ ++LK+ A + A+ L + Sbjct: 940 LAHDILPE----CPLPFLNAGRVYVATNNPSSAIEHFNQALKVDPRCSSAHLDIAQVLFA 995 Query: 273 QNKKRKAEVILEKI 286 Q + +A + Sbjct: 996 QGRTSEAFRHFDAA 1009 >gi|301780654|ref|XP_002925730.1| PREDICTED: pre-mRNA-processing factor 6-like [Ailuropoda melanoleuca] Length = 951 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 589 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 646 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 647 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 706 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + M + + LK C +S + ++ Sbjct: 707 LCEEALKHYEDFPKLWMMKGQIEEQEELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 766 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S V+ Sbjct: 767 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 824 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 825 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 882 Query: 391 D 391 D Sbjct: 883 D 883 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 298 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 354 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 355 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 406 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 407 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 459 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 460 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 505 >gi|85710265|ref|ZP_01041330.1| TPR repeat protein [Erythrobacter sp. NAP1] gi|85688975|gb|EAQ28979.1| TPR repeat protein [Erythrobacter sp. NAP1] Length = 694 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 55/196 (28%), Gaps = 4/196 (2%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + S + F + + L A Q IA E + + A Y+L Sbjct: 56 ADALGSAQAMLREFPDTMAAWNLAGACARVLGQTAIAEESFRRLEALSPNFAGAAYNLGL 115 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 GD A+ +A+ I P + + AI L Q E Sbjct: 116 VLEDKGDPAGAEAAYKRAIAIDPSLAQARNNLGGVLIAQGRLDEAIAQLEQACALRPEL- 174 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A + + G + + +L+ + + A + +A Sbjct: 175 ---AEVHNTHANALKKAGRLEEARKAYKRALEAQPDFVTARFNLGSLEQEHGEITQAVEE 231 Query: 283 LEKIWKVNPHPEIANI 298 + K P +A Sbjct: 232 YRAVLKAQPGHSLARA 247 >gi|326560831|gb|EGE11197.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 46P47B1] Length = 671 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + + RA+ E + A + R+L + S A Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A + + +A ++ I +P ++ I T ++ K Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373 L+ + + + V+ + I + + A A+ I P F L I +A + Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330 Query: 374 NTD 376 + Sbjct: 331 LDE 333 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314 + ++ A+ + R+A I + +K N + E L A Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ N + + + V+ +AL+ G +QA A + PR ++ +L I Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258 >gi|149175512|ref|ZP_01854133.1| TPR repeat [Planctomyces maris DSM 8797] gi|148845780|gb|EDL60122.1| TPR repeat [Planctomyces maris DSM 8797] Length = 317 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 4/138 (2%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + Y+ Q+ + A E+ L AV L G A++ Sbjct: 53 LKDPDKFYVTHGQLQEKMGDMDSARNSYEVALGENPKSVEAVLGLARLDQVAGRKIEAEK 112 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 KAL++SP P V ++ Q Y K+W +AI L + K A R L IA + Sbjct: 113 GFQKALEMSPKDPQVRASIGQFYAAEKKWDQAIALLGEASKAAPADKNIRYQLGIAMAS- 171 Query: 236 NADKGDMIASYHDAIESL 253 GD A+ I ++ Sbjct: 172 ---AGDYQAAMPHLIRAV 186 >gi|326939236|gb|AEA15132.1| TPR repeat-containing protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 420 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 95/271 (35%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVL 294 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++ LK + E L+ + + A++ G Sbjct: 295 QKALELDPGH--LGATLKYAYI--------LKGQEK--------YEELIAIVERAIDSGE 336 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + + Sbjct: 337 PDTQLLWDLAYAKKQLEMYLDALKHYESAYT 367 >gi|323137815|ref|ZP_08072890.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis sp. ATCC 49242] gi|322396818|gb|EFX99344.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis sp. ATCC 49242] Length = 290 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 14/242 (5%) Query: 158 YSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + +A T+ + +P + Y ++ AI Q K Sbjct: 47 RGIAEIADTDSKAAAANIDSLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAIK 106 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A R+L G A+ +D ++++ N A + A L +Q Sbjct: 107 LDPNS----AAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNL 162 Query: 277 RKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A L+ ++N PE A + H + + + + + Sbjct: 163 DQALSDLDTAIRLN--PESAQAFHARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQAR 220 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + +G D+A A+ + + + + + N K Q AL D Sbjct: 221 GESLVALGKYDKAVEDFNAALNVDNKSALAWAWLGLAYEKNGNRQKAQESYQRALQ--LD 278 Query: 392 PL 393 P Sbjct: 279 PQ 280 Score = 36.5 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 4/184 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 ++N A +++ A + +IG +A+ A+ ++P+ Sbjct: 87 AYARVGRFNEAIADFTQAIKLDPNSAAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHA 146 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +A++ L+ + E A AR L + +GD + D Sbjct: 147 PAYVGRANLLRAQGNLDQALSDLDTAIRLNPES----AQAFHARGLIHQKRGDNARAVTD 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ++ + +SL++ K KA V+ +A + L E Sbjct: 203 FDNAIDRDPFAAAPYQARGESLVALGKYDKAVEDFNAALNVDNKSALAWAWLGLAYEKNG 262 Query: 309 GKLK 312 + K Sbjct: 263 NRQK 266 >gi|300868250|ref|ZP_07112881.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506] gi|300333774|emb|CBN58065.1| TPR repeat-containing protein [Oscillatoria sp. PCC 6506] Length = 728 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 73/226 (32%), Gaps = 16/226 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G L A + +AL+ PD + + AI F ++ ++ Sbjct: 29 AQGKLTEAIAFCRRALEAKPDWAPAYVTMGNVQQAQGQIEEAIRFYSEALAFNPDYAEAY 88 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A L +G + + + +++ L + A +L Q K +A+ +K Sbjct: 89 ANL----GSMLYKQGRFVEAIVNYEKAIGLKPDLAAAYWNLGNALKQQGKLEEAKSYQQK 144 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI------NKESVESLVIVSKIALEMG 339 K+NP Y + + K + + +SV++ + + G Sbjct: 145 AIKINPQLGGVEFYLD-RGDELANQGKLSEAVAAWKRAITIKPDSVDAYCQIGIVLRYQG 203 Query: 340 SIDQAHAKAMLAMKIAPR-----KEIFLLLAQIEQANSHNTDKILY 380 + +A A++I P + + +L + Y Sbjct: 204 KLKEAIPYLQKALEIKPDFAIAHQHLCGILRDATNLEAARQAVSKY 249 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 61/182 (33%), Gaps = 11/182 (6%) Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++E A L + +G + + +L+ + A + +Q + Sbjct: 9 SQETKPEDAQALTQAAEVYYAQGKLTEAIAFCRRALEAKPDWAPAYVTMGNVQQAQGQIE 68 Query: 278 KAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332 +A + N P+ A Y +L V + + + + + + Sbjct: 69 EAIRFYSEALAFN--PDYAEAYANLGSMLYKQGRFVEAIVNYEKAIGLKPDLAAAYWNLG 126 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 + G +++A + A+KI P+ E +L ++ + W + A+ Sbjct: 127 NALKQQGKLEEAKSYQQKAIKINPQLGGVEFYLDRGDELANQGKLSEAVAAW-KRAITIK 185 Query: 390 PD 391 PD Sbjct: 186 PD 187 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 22/181 (12%) Query: 131 LAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESC--------RIGDLNSAQRYATKAL 181 A+ Q A E + P Y E+ + G A KA+ Sbjct: 62 QAQGQIEEAIRFYSEALAFNPD---------YAEAYANLGSMLYKQGRFVEAIVNYEKAI 112 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + PD + + A ++ + K + + R E A++G Sbjct: 113 GLKPDLAAAYWNLGNALKQQGKLEEAKSYQQKAIKINPQLGGVE--FYLDRGDELANQGK 170 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + + ++ + +S+ A L Q K ++A L+K ++ P+ A + H Sbjct: 171 LSEAVAAWKRAITIKPDSVDAYCQIGIVLRYQGKLKEAIPYLQKALEIK--PDFAIAHQH 228 Query: 302 L 302 L Sbjct: 229 L 229 >gi|302819239|ref|XP_002991290.1| hypothetical protein SELMODRAFT_185963 [Selaginella moellendorffii] gi|300140870|gb|EFJ07588.1| hypothetical protein SELMODRAFT_185963 [Selaginella moellendorffii] Length = 819 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 70/230 (30%), Gaps = 23/230 (10%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQ 213 +L+ + + A +A+++ P + A+ L Sbjct: 224 RTLFDHAF----FDEALARFKRAIELRPTDVRPYFRSGNSLCSTARFHDAVESYSLALEA 279 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 N W + + + +G ++ + E+ L A +L+ Sbjct: 280 AHSNGPLWCALLPQIHVNLGIALEGQGMLLGACEHYREAAILSPAHYRALKLLGSALLGV 339 Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + R AE L + + P H ++ ++ H ++ + ++ ++L Sbjct: 340 GEYRAAEKALREAISIKPDYADAHCDLGSV-LHAAGDSDKA-VAEFHAAIQLQPSHTDAL 397 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370 + + GS QA + + P L +A +E A Sbjct: 398 YNLGGCLRDSGSFSQAAEAYSSVIALDPTHWQAHLNKAVSLLGMADVEHA 447 >gi|152993966|ref|YP_001359687.1| hypothetical protein SUN_2394 [Sulfurovum sp. NBC37-1] gi|151425827|dbj|BAF73330.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 731 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 8/119 (6%) Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIA 296 + E+L+L + I + L+ Q K R+A IL+K + P H + Sbjct: 577 PGKAEKAYKEALRLQPQFVPGYINYSNFLLQQGKNREAFDILKKGLALLPKMGVLHHALG 636 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + ++ + L+ + E++ ++ + + +AL +A A K Sbjct: 637 LWY--VRNKESGKALEELRKALELSPDNARFAYVYA-VALAENDPKKAIEVLEKAYKRH 692 >gi|300114549|ref|YP_003761124.1| TonB-dependent receptor [Nitrosococcus watsonii C-113] gi|299540486|gb|ADJ28803.1| TonB-dependent receptor [Nitrosococcus watsonii C-113] Length = 1125 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 18/200 (9%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P A + A+ + A+ L Q A ++ G + Sbjct: 213 PAAREIHAALHDYRA--GDLPAALARLEQ-----VPIEVREASYFTLQAALLLVVGRVDE 265 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTH 301 + +L+L + A A + QN+K KA + ++ K++P P+IA Y + Sbjct: 266 ARSKIQHALQLDPDQGTAYALQAIIALVQNQKEKALSLAQQAAKLDPRSPIPQIALSYVY 325 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---- 357 N L A + E+ + + V+++ L +G+ ++A A A+ + P Sbjct: 326 QGMFNIERALAHAQQAIELFPGAPLAWARVAELQLSLGNSEKAAKAAQQAVALDPDLART 385 Query: 358 ---KEIFLLLA-QIEQANSH 373 + L A IE+A Sbjct: 386 QTVQGFADLTAIDIEEAKGA 405 >gi|225871857|ref|YP_002753311.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] gi|225793226|gb|ACO33316.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] Length = 436 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 78/254 (30%), Gaps = 9/254 (3%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + V +L +IA +IA ++ +L A+ L Sbjct: 167 AALVQALKLTPETASDTMLAARIAENAGSPDIAEQEYRHVLANSPEDSAAIAGLTHILMV 226 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + A+ AL PD P + + + AI L + + + Sbjct: 227 EKKYDQAEPLVKSALTRDPDDPTLNAEYAAILSAEGKLTEAIASLEK--LHQLHPHNPTV 284 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++A + GDM + + + + A + LI Q + +A ++ Sbjct: 285 ANMLADA--YLQSGDMDKAAALYPQVIAAQPGNTDALDSYGQVLIRQKRFPEAVSTFQQA 342 Query: 287 WKVNPHPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K P +I + + ++ + ++ + +L +++ + Sbjct: 343 LKAQPG-DIDALSGVAFASNETGQYQQEIAALEQRAQLTPNTPATLFLLATAYDHLRQYK 401 Query: 343 QAHAKAMLAMKIAP 356 QA + + P Sbjct: 402 QAASYYHQFLASNP 415 >gi|197106191|ref|YP_002131568.1| TPR domain protein [Phenylobacterium zucineum HLK1] gi|196479611|gb|ACG79139.1| TPR domain protein [Phenylobacterium zucineum HLK1] Length = 498 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 20/147 (13%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP 150 ++ ++ A + Q L+ + AE+Q++ A + E + P Sbjct: 77 LAATLGDLGHADEAARAARQAIGLGIAAPETRLVLARALQAEQQFDEAEQAFAEALRLRP 136 Query: 151 ATREFAVYSLYFES---------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 Y ++ R GD ++A + +A+ +P P + A+ Sbjct: 137 D---------YVDANNELAQLMWMRTGDRDTALKPLERAVASAPGHPGLAYALAMAQEFT 187 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A Q + + R ++ Sbjct: 188 GQKEAARATAEQALARSPQDRRLLSLA 214 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 6/139 (4%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + D G + A +++ L + + A++L ++ + +AE + ++ P Sbjct: 77 LAATLGDLGHADEAARAARQAIGLGIAAPETRLVLARALQAEQQFDEAEQAFAEALRLRP 136 Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + E+A + + + + LK R ++ G + A A Sbjct: 137 DYVDANNELAQLMW-MRTGDRDTALKPLERAVASAPGHPGLAYALAMAQEFTGQKEAARA 195 Query: 347 KAMLAMKIAPRKEIFLLLA 365 A A+ +P+ L LA Sbjct: 196 TAEQALARSPQDRRLLSLA 214 >gi|321470550|gb|EFX81526.1| hypothetical protein DAPPUDRAFT_303463 [Daphnia pulex] Length = 611 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 9/188 (4%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRY 176 L LL ++ A + + P T R A+ ++G + Sbjct: 331 LARLLRGTFLSLLGEHEKALDDFSAVFNDPETDPKVRVNALVKRATLRMQLGSPEESLHD 390 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLIARS 233 A ++ P+ V Q Y+L + S A++ + ++ + + Sbjct: 391 LLMAAELGPENADVFHHRGQVYMLLDQASEAMSDFAKAVSLNGDFPIALVQKLYTDYRAA 450 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + ++ G+++AS ++++ + A+ L Q + KA+ + K +V+PH Sbjct: 451 VAMSNAGEVVASLAAFEDAIRRFPTCPECFLLYAQVLSDQQEFVKADELFMKALEVDPHN 510 Query: 294 EIANIYTH 301 A Y H Sbjct: 511 --ATAYVH 516 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 6/142 (4%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP--ATREFA 156 + + ++ F +LL Q+ ++++ A E + + P AT Sbjct: 457 GEVVASLAAFEDAIRRFPTCPECFLLYAQVLSDQQEFVKADELFMKALEVDPHNATAYV- 515 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK- 215 L + G++ A ++ +A+ + + E + V RAI ++ Sbjct: 516 HRGLL-QLQSTGNVELATKHIEEAIRMDDKCEFAYETLGTIEVQRGNLRRAIELFDKAIP 574 Query: 216 KNAKEWNRNRAILLIARSLENA 237 + E + L +L Sbjct: 575 LSKTEAEVSHLFSLKDAALAQL 596 >gi|320102797|ref|YP_004178388.1| Serine/threonine-protein kinase-like domain-containing protein [Isosphaera pallida ATCC 43644] gi|319750079|gb|ADV61839.1| Serine/threonine-protein kinase-like domain protein [Isosphaera pallida ATCC 43644] Length = 979 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 44/369 (11%), Positives = 100/369 (27%), Gaps = 33/369 (8%) Query: 14 VICSFIIVSHYPEDVSITWGNRLY------RTSPFVILSI----LYFFLFAWILLFAVSR 63 + ++ P+ + + ++ + V L++ L L L A R Sbjct: 381 ASLGVVALARMPDAIQLVLASQRIRHSDNRQMGSPVALALRPDSLSVQLNHAGSLLAHQR 440 Query: 64 FFLSCPAMLFHMLHKR--NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL 121 F + + +R +G+ L + + + + + + + Sbjct: 441 F--NDVEAFSRAILERHPKESRGWLMLAQAI----EGRGRVTEALDAARAAVECDGDSWG 494 Query: 122 VYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 ++ L A L E + P + + L R+G+ A Sbjct: 495 ARYTLARLQLQAGDPETARRTLDRIEERLEGRPEMMDVQLIRLAELLRRLGEPERAVALC 554 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + L+ D ++ A R L + R Sbjct: 555 RRVLESHSDHALGFTSLGMALAQLGRIDEAEASWRHALALNPNEPRASGQLALLR-FRQG 613 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSL------ISQNKKRKA-EVILEKIWKVN 290 G+ I + A + + I AA + A +L Sbjct: 614 RLGEAIELFERAFTNAASSQD-IPLEETAAYLYNLGMAQARAGRFGDAETSLLRLSTFKP 672 Query: 291 PHPEIANIYTH-LLSENTVGKLKRALR-LEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 PHP++ + L +++ + + R L + + ++ + + +A A Sbjct: 673 PHPKVRSALLEVLANDDDLNRAIHVTRGLMKNQPHDPSLRLTLAVLLMRSQQTAEAVDLA 732 Query: 349 MLAMKIAPR 357 P Sbjct: 733 AQVQADHPD 741 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 95/307 (30%), Gaps = 48/307 (15%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA---ERQYNIAH 140 G+ +L L + + A H+ NE Q+AL + + A Sbjct: 567 GFTSLGMALAQLGRIDEAEASWRHALA----LNPNEPRA---SGQLALLRFRQGRLGEAI 619 Query: 141 EKLEMMLQI---------PATREFAVYSL-YFESC--RIGDLNSAQRYATKALDISPDAP 188 E E T + +Y+L ++ R GD ++ + P P Sbjct: 620 ELFERAFTNAASSQDIPLEETAAY-LYNLGMAQARAGRFGDAETSLL---RLSTFKPPHP 675 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 V A+++ + +RAI KN R L ++ + Sbjct: 676 KVRSALLEVLANDDDLNRAIHVTRGLMKNQPHDPSLRLTL----AVLLMRSQQTAEAVDL 731 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---------NP--HPEIAN 297 A + + ++ L + + +A +LE K+ +P ++ Sbjct: 732 AAQVQADHPDWFEPALVYGDLLGTVGRFAEAAQMLECALKLIGEREGPRQSPRNQRQLMG 791 Query: 298 IYTHLLSENTVGK---LKRALRLEEINKES-VESLVIVSKIALEMGSIDQA---HAKAML 350 H T + + L + + E +++ + AL G I A + Sbjct: 792 AIEHARQLETACRWVEVWSRGELCGFDPQHNPEFSMLMIQAALARGWIVPALTLAQRLND 851 Query: 351 AMKIAPR 357 A ++ P Sbjct: 852 ADQLTPT 858 >gi|296112414|ref|YP_003626352.1| tetratricopeptide TPR_2 [Moraxella catarrhalis RH4] gi|295920108|gb|ADG60459.1| tetratricopeptide TPR_2 [Moraxella catarrhalis RH4] gi|326561921|gb|EGE12256.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 7169] gi|326570335|gb|EGE20379.1| tetratricopeptide TPR_2 [Moraxella catarrhalis BC1] Length = 671 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + + RA+ E + A + R+L + S A Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A + + +A ++ I +P ++ I T ++ K Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373 L+ + + + V+ + I + + A A+ I P F L I +A + Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330 Query: 374 NTD 376 + Sbjct: 331 LDE 333 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314 + ++ A+ + R+A I + +K N + E L A Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ N + + + V+ +AL+ G +QA A + PR ++ +L I Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258 >gi|268317305|ref|YP_003291024.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262334839|gb|ACY48636.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM 4252] Length = 409 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 11/181 (6%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++L + R G A + L + P+A + + Y A L + Sbjct: 108 HNLANNAARRGQFREAIALFRRELALRPNAL-SWRGIGRAYAELGRPDSARLALETALR- 165 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ A + + N ++G + A + +L S++A L+ + Sbjct: 166 ---YDSTYAEAWLDLAELNENEGRYDEALRAARRAWELAPKSLVARYRLGNLLLLTGQPA 222 Query: 278 KAEVILEKI-----WKVNPHPEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIV 331 +A +LE + W H + + L + L+RA L + + ++ ++V Sbjct: 223 QARPLLESVVQEAPWHQAAHYSLGRVLQQLGETEAARRMLERAEALRALQAKVEQAELLV 282 Query: 332 S 332 + Sbjct: 283 A 283 >gi|222081532|ref|YP_002540896.1| adenylate cyclase protein [Agrobacterium radiobacter K84] gi|221726211|gb|ACM29300.1| adenylate cyclase protein [Agrobacterium radiobacter K84] Length = 736 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 5/163 (3%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A A +AL + P+ + ++ + A N+ A Sbjct: 438 ARKIAYDAAGQALKLDPNNARAHTVLALLQLVDGREAEARESANRAVAAQPNS----AEA 493 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIW 287 +L + G+ + + +L+L + + + A L + +A ++E Sbjct: 494 AGNLALILSHTGNHDEAIAEIDRALRLDPSPSPSFQLLAGIVLYTARDNGRAVPLIEAAR 553 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 P+ E A Y +++ A ++ + ES + Sbjct: 554 DALPNVEPAREYLTAAYGFDGDRVRSAAEKTKLLELFPESNLA 596 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 8/128 (6%) Query: 174 QRYATKALDISPDAPWVT--EAVVQQYVLAKE----WSRA--ITFLNQKKKNAKEWNRNR 225 Y KA+D+ P+ A V V + WS A A + + N Sbjct: 397 LSYYQKAIDLDPNFADAHAGIARVAVDVWRNDYNFLWSAAVARKIAYDAAGQALKLDPNN 456 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A +L G + A ++ NS A+ A L +A +++ Sbjct: 457 ARAHTVLALLQLVDGREAEARESANRAVAAQPNSAEAAGNLALILSHTGNHDEAIAEIDR 516 Query: 286 IWKVNPHP 293 +++P P Sbjct: 517 ALRLDPSP 524 >gi|22298738|ref|NP_681985.1| hypothetical protein tll1195 [Thermosynechococcus elongatus BP-1] gi|22294919|dbj|BAC08747.1| tll1195 [Thermosynechococcus elongatus BP-1] Length = 281 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 58/176 (32%), Gaps = 16/176 (9%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+ + I +S Q +Y + L Q A + + +L Sbjct: 84 LIQLGKGEIASVIDPLRRLSAQRPEQTDYAILL--GQAQQQTGDREGAAQTFQGVLAKSP 141 Query: 152 TREFAVYSLYFESCRIGDLNSA-------QRYATKALDISPDAPWVTEAVV---QQYVLA 201 A+ +L + +A + A +A + P + VT + Y+ Sbjct: 142 GNLNALRALVDLYLKENRPQAAIGLIQDTLQGAEQANKVQPGSVDVTAVQLLLGDVYMTQ 201 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 K + A+T K R ++A+++ ++G + ++++L Sbjct: 202 KRYDEALTLFQNLGKENPNDFRP----VLAQAMALTEQGKKTQAAALYAKAVELAP 253 >gi|325268008|ref|ZP_08134655.1| tetratricopeptide (TPR) domain protein [Kingella denitrificans ATCC 33394] gi|324980549|gb|EGC16214.1| tetratricopeptide (TPR) domain protein [Kingella denitrificans ATCC 33394] Length = 390 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 9/154 (5%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIG--DLNSAQRYATKALDISPDA 187 + + A + +L P T RE +Y L G D L S A Sbjct: 89 GENDKAIAMHKALLDSPDTVGAKRERVLYELGLNYQNAGLVDRAEQILLG---LQHSNMA 145 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 E ++ Y ++W +AI + + + A + +G+ A+ Sbjct: 146 QSANEILLNIYQQDRDWEKAIATAQLLAHDEQTYQFEIAQFYCEMAQAELFRGNDDAAQQ 205 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +L+ A++ A + Q + + A Sbjct: 206 KVQAALQANPKCARANMIAGDIAVKQGRFQDAVA 239 >gi|194224664|ref|XP_001493255.2| PREDICTED: similar to U5 snRNP-associated 102 kDa protein [Equus caballus] Length = 915 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 97/300 (32%), Gaps = 41/300 (13%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 554 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 611 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 612 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 671 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + LK C +S + ++ Sbjct: 672 LCEEALKHYEDFPKLWMMKGQIEEQEELTEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 731 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + +A ILEK NP +P + L + + A L + S ++ Sbjct: 732 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPSSGVLW 789 Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A+ + + Q K++ A+K + L +A++ + K W + D Sbjct: 790 SEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIDSD 848 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 263 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 319 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 320 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 371 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 372 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 424 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 425 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 470 >gi|268572137|ref|XP_002641244.1| Hypothetical protein CBG09112 [Caenorhabditis briggsae] Length = 1717 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 22/205 (10%) Query: 160 LYFESCRIGDLNSAQRYATKAL-DISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQK 214 L+ E DL +A++ A +AL I+P + A + V + + + Sbjct: 1469 LFVEK---SDLKAARKTAEEALSAINPTESEELLKMWTAYLNMEVAYGDSTTVDEVFKRA 1525 Query: 215 KKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 KNA + R + I + ++A+ ++ + KL A+ L++Q Sbjct: 1526 CKNANSYTIYRTLAKIYQKFNKHAEAKHILEQMVSKFRANKLE-----VWTLLAEHLMNQ 1580 Query: 274 NKKRKAEVILEKIWKVNP----HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVE 326 +++ A +L + K P H ++ + + L + G+ L + + + Sbjct: 1581 KEQKGARDLLPRALKSAPKAQQHIQLISKFAQLEFKLGDAERGR-TLLEGLVTAHPKKTD 1639 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 ++ + AL+ I+ A A Sbjct: 1640 LWLVYADAALKHLGIEHARKILERA 1664 >gi|302812416|ref|XP_002987895.1| hypothetical protein SELMODRAFT_183465 [Selaginella moellendorffii] gi|300144284|gb|EFJ10969.1| hypothetical protein SELMODRAFT_183465 [Selaginella moellendorffii] Length = 809 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 23/230 (10%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQ 213 +L+ + + A +A+++ P + A+ L Sbjct: 214 RTLFDHAF----FDEALARFKRAIELRPTDVRPYFRSGNSLCSTARFHDAVESYSLALEA 269 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 N W + + + +G ++ + E+ L A +L+ Sbjct: 270 AHSNGPLWCALLPQIHVNLGIALEGQGMLLGACEHYREAAILSPAHYRALKLLGSALLGV 329 Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + R AE L + + P H ++ ++ H ++ + ++ ++L Sbjct: 330 GEYRAAEKALREAISIKPDYADAHCDLGSV-LHAAGDSDKA-VAEFHAAIQLQPSHTDAL 387 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370 + + GS A + + P L +A +E A Sbjct: 388 YNLGGCLRDSGSFSLAAEAYSSVIALDPTHWQAHLNKAVSLLGMADVEHA 437 >gi|281343242|gb|EFB18826.1| hypothetical protein PANDA_015282 [Ailuropoda melanoleuca] Length = 922 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 560 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 617 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 618 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 677 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + M + + LK C +S + ++ Sbjct: 678 LCEEALKHYEDFPKLWMMKGQIEEQEELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 737 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S V+ Sbjct: 738 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 795 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 796 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 853 Query: 391 D 391 D Sbjct: 854 D 854 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 269 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 325 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 326 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 377 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 378 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 430 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 431 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 476 >gi|86608732|ref|YP_477494.1| TPR domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557274|gb|ABD02231.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 653 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 7/172 (4%) Query: 119 EYLVYLLEVQIAL--AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 E+L LL Q Q+ A + +LQ T A++ L + G L+ A Sbjct: 19 EHLQRLL-AQAVRHHQAGQWPQAVSLCQQVLQAQPTHPEALHLLGVCRQQQGSLDDAIAL 77 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +AL P P + A + + A T L + A +L L Sbjct: 78 IRQALAHQPWFPDAHFNLGIVLKQAGQLAEAKTHLQLALEQGGP----DAEVLYQLGLVL 133 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 +GD+ A+ ++L+L + A+ A L ++ +A + ++W+ Sbjct: 134 RQQGDLEAALVPLGQALELQPDFADAAYTLAILLRDCGREEEAAELFYQLWQ 185 >gi|326573645|gb|EGE23604.1| tetratricopeptide TPR_2 [Moraxella catarrhalis CO72] Length = 671 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + + RA+ E + A + R+L + S A Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A + + +A ++ I +P ++ I T ++ K Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373 L+ + + + V+ + I + + A A+ I P F L I +A + Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330 Query: 374 NTD 376 + Sbjct: 331 LDE 333 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314 + ++ A+ + R+A I + +K N + E L A Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ N + + + V+ +AL+ G +QA A + PR ++ +L I Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258 >gi|196001065|ref|XP_002110400.1| hypothetical protein TRIADDRAFT_54351 [Trichoplax adhaerens] gi|190586351|gb|EDV26404.1| hypothetical protein TRIADDRAFT_54351 [Trichoplax adhaerens] Length = 1584 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 8/181 (4%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT--R 153 A +I ARK H+E + L A + + + + P + Sbjct: 514 AKDIHRARKCFEKAYDLDKNHDEAAMML--ADTCTITGDNEAAVKIYKSVTEWRPILSCK 571 Query: 154 EFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + LY D+ A A+ P PW E + Y ++ AI Sbjct: 572 WAWLRLGLYQ--MDHMDIIEACISFQNAIRADPVDPWSWECLGDAYKERGSYTAAIKAYA 629 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + A E + L + G + + D + L+ + + I AKSL + Sbjct: 630 RCVQLAGEEDTKVIYPLFQVASIKHLLGLLDEAIADYKKILEFHADYVPVLIGIAKSLFA 689 Query: 273 Q 273 + Sbjct: 690 K 690 >gi|163798112|ref|ZP_02192049.1| TPR repeat [alpha proteobacterium BAL199] gi|159176603|gb|EDP61180.1| TPR repeat [alpha proteobacterium BAL199] Length = 618 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 81/234 (34%), Gaps = 15/234 (6%) Query: 95 IAAHNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 +A + A K S + L LL Q A E L I Sbjct: 116 LARGDRATALKAQSRAVELAPDSAVQRYNLGNLLAA-----TGQTAKAAEAYGATLDIDP 170 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ +L + G+L+ A+ +AL P P + + + RA+ + Sbjct: 171 GHVGALNNLSVLHKQAGNLDEAEALLDEALLHDPMNPELLANHADILLQRGQGERALETM 230 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + A +A L +A + G + + + +++ + ++ ++ L Sbjct: 231 RRAAGLAP----GQATLRLALGSMLLELGRLSEAGQELAAAMRGAPENADIALALSRLLR 286 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINK 322 QN+ A+ ++ K++ P A + L+ V ++ LE ++ Sbjct: 287 RQNQLDGAQAAADRAVKLSGKPSAAEVLAIELLLMRGRYVDAWEKLDALEALSP 340 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 87/306 (28%), Gaps = 49/306 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G +++ A ++ + + + L LA+ + A + L + Sbjct: 44 GTIALGGGETARALELIGHAVAIAPTDGKTVGNL--GVAYLAQNKLAEAEDCFRRALDLE 101 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISP--------------------DAPWV 190 + + GD +A + ++A++++P A Sbjct: 102 PGQPALHANFATALLARGDRATALKAQSRAVELAPDSAVQRYNLGNLLAATGQTAKAAEA 161 Query: 191 TEAVVQ--------------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A + + A A L++ + LL + Sbjct: 162 YGATLDIDPGHVGALNNLSVLHKQAGNLDEAEALLDEALLHDP----MNPELLANHADIL 217 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 +G + + L + L+ + +A L + P + +I Sbjct: 218 LQRGQGERALETMRRAAGLAPGQATLRLALGSMLLELGRLSEAGQELAAAMRGAPENADI 277 Query: 296 ANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 A + LL + RA++L + E V+ ++ L G A K Sbjct: 278 ALALSRLLRRQNQLDGAQAAADRAVKLSG-KPSAAE--VLAIELLLMRGRYVDAWEKLDA 334 Query: 351 AMKIAP 356 ++P Sbjct: 335 LEALSP 340 >gi|332293024|ref|YP_004431633.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] gi|332171110|gb|AEE20365.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 673 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 101/317 (31%), Gaps = 44/317 (13%) Query: 94 SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ + + AR + + + + E V L + L + + A + E ++ +T Sbjct: 60 ALGLSGDSAEARLLFTTLKADYPTDFE--VGLNYAESLLWDSDFGAAKDFYETLVAKDST 117 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA-------VVQQYVLAKEWS 205 A+ + + ++A Y KAL + P + Q A ++ Sbjct: 118 SFSALLGYANTLSNLKEYDAAITYVNKALTVQPGNANAAVSKKFMRLGKANQLTTAFQYD 177 Query: 206 RAITFLNQKKKNAKEWNRNRAILL--------------------------IARSLENADK 239 AI L ++ + + L + +SL + Sbjct: 178 AAIQLLKSALEDMPNDEQIISALANTYIAKKDYENANTMYSQLSDTLTSQVGKSLVAHLQ 237 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ----NK---KRKAEVILEKIWKVNPH 292 D + A ES+ I A + I K R A L+ + N Sbjct: 238 KDDKLALSLAQESIAFAKADTTKIITANERYIQALIWNGKYATARTAIADLKVTFPTNQR 297 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + ++ + E + S + + ++ G++D+A+A A + Sbjct: 298 VAALKATLGMYTGTFKKSIEVYNGILEKDSASFDGNLGIANAYRAQGNLDEAYAFAKNTL 357 Query: 353 KIAPRKEIFL-LLAQIE 368 P ++ L+ IE Sbjct: 358 TFYPNQKDATGLMKTIE 374 >gi|330873196|gb|EGH07345.1| hypothetical protein PSYMP_02761 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 654 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 29/214 (13%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD +A A A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC------AAKSLISQNKKR 277 N A LL R GD + D ++L ++C A + + + Sbjct: 246 NDATLLAQRGQLRQRLGDRDGARQDFAQAL---------AVCNLPLREQASLYAAMGQPK 296 Query: 278 KAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVES 327 +A L+K P E+ Y + + G L KR R + ++ S Sbjct: 297 EALQRLQKARDAGELQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYS 356 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + S A + + P +++F Sbjct: 357 AMRTSDDAQAIAYFKRVLDYQQTGDLQMPDQQVF 390 >gi|309787507|ref|ZP_07682119.1| cellulose synthase operon C domain protein [Shigella dysenteriae 1617] gi|308925085|gb|EFP70580.1| cellulose synthase operon C domain protein [Shigella dysenteriae 1617] Length = 640 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + H + + L A R Y A + +L T A+ L Sbjct: 67 RESGKEAEAEAMLHQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 126 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 127 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 186 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 187 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 221 >gi|170680722|ref|YP_001745805.1| cellulose synthase subunit BcsC [Escherichia coli SMS-3-5] gi|170518440|gb|ACB16618.1| cellulose synthase operon protein C, truncated [Escherichia coli SMS-3-5] Length = 1157 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|326563052|gb|EGE13326.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 103P14B1] gi|326577281|gb|EGE27169.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 101P30B1] Length = 671 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + + RA+ E + A + R+L + S A Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A + + +A ++ I +P ++ I T ++ K Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373 L+ + + + V+ + I + + A A+ I P F L I +A + Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330 Query: 374 NTD 376 + Sbjct: 331 LDE 333 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314 + ++ A+ + R+A I + +K N + E L A Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ N + + + V+ +AL+ G +QA A + PR ++ +L I Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258 >gi|256810580|ref|YP_003127949.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] gi|256793780|gb|ACV24449.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus fervens AG86] Length = 290 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 70/243 (28%), Gaps = 44/243 (18%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNS 172 N + + I + + E L+ P + +L Sbjct: 50 PNHPMANFFKGFIQALHGDFEKSLEFFNRGLKSSDGNPIVKFA--RALAKLHLNK--PEE 105 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 + + + +P + + ++ A+ + + A Sbjct: 106 CLKDLEEVVKANPKFAFAYSFIGGILEDFGKYEDALKAYKKMAEIAPNP-----YAYYKI 160 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + G S E+LK+ + A I A+ L+S NK +A + L+K Sbjct: 161 ASLLYNLGKHEESLRYLDEALKIDSKFVSALILKAEILLSLNKISEALLTLKKA------ 214 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +I ++ ++L ++ I L +G D+A + Sbjct: 215 -------------------------LDIRPDNTQALFVLGLIHLRIGEFDEAINAFNKVL 249 Query: 353 KIA 355 + Sbjct: 250 EKN 252 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 16/193 (8%) Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 K L+ P+ P L ++ +++ F N+ K++ I+ AR+L Sbjct: 44 KVLEAHPNHPMANFFKGFIQALHGDFEKSLEFFNRGLKSSD----GNPIVKFARALAKLH 99 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----E 294 D E +K A L K A +K+ ++ P+P + Sbjct: 100 LNKPEECLKDLEEVVKANPKFAFAYSFIGGILEDFGKYEDALKAYKKMAEIAPNPYAYYK 159 Query: 295 IAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAM 352 IA+ +Y E ++ L AL+++ S +I+ ++I L + I +A A+ Sbjct: 160 IASLLYNLGKHEESLRYLDEALKIDSK----FVSALILKAEILLSLNKISEALLTLKKAL 215 Query: 353 KIAP--RKEIFLL 363 I P + +F+L Sbjct: 216 DIRPDNTQALFVL 228 >gi|163760770|ref|ZP_02167850.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43] gi|162282092|gb|EDQ32383.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43] Length = 623 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 12/156 (7%) Query: 239 KGDMIASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKV-NPHP 293 K +++ + +++L A ++C ++ + A IL+ K P Sbjct: 357 KANLLMARQSFTRAVELDPTYARAYASMAVCESRLMSQFGVTISAGDILKTADKALAIDP 416 Query: 294 EIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 ++A + + +N V R +++ S E+ +++ + + + A Sbjct: 417 DLAEAHAARGFALAVGDNRVEASPAFKRAIDLDPNSNEAHRFLAEFCVTDSNFEAAATHF 476 Query: 349 MLAMKIAPRK--EIFLLLAQIEQANSHNTDKILYWT 382 + A++ P +L+ + K W Sbjct: 477 IRALETKPDDCNSALMLVNVLRSLEREEEAKEYGWL 512 >gi|16125584|ref|NP_420148.1| TPR domain-containing protein [Caulobacter crescentus CB15] gi|221234333|ref|YP_002516769.1| tetratricopeptide repeat family protein [Caulobacter crescentus NA1000] gi|13422682|gb|AAK23316.1| TPR domain protein [Caulobacter crescentus CB15] gi|220963505|gb|ACL94861.1| tetratricopeptide repeat family protein [Caulobacter crescentus NA1000] Length = 576 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 10/229 (4%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + A E + A + + +GD A A AL +P+ A+ Sbjct: 323 DHQAAIEAYGRVPAGAPLYASAQSKIAWAWSALGDKTKALDVARAALTAAPNDRDAAVAL 382 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + W ++ L+ E R LL R++ G + D +LK Sbjct: 383 ADLLRASSRWDESVAVLDLLLAREAEAPDWR--LLYMRAIALEQGGRWPEAEKDLQTALK 440 Query: 255 LCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTV 308 + + S I +N + +A ++EK P + Y L T Sbjct: 441 VNPDEPDLLNFLGYSWIDRNERLPEALAMVEKAVAARPQSGAMMDSLGWAYFRLGDYKTA 500 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +++ E+ + + + G +A + + + P Sbjct: 501 --IEKLEAAVELEPGDPDINGHLGDAYWKAGRTIEARFQWQRVLSLEPT 547 >gi|127512885|ref|YP_001094082.1| hypothetical protein Shew_1957 [Shewanella loihica PV-4] gi|126638180|gb|ABO23823.1| conserved hypothetical protein [Shewanella loihica PV-4] Length = 386 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 100/310 (32%), Gaps = 40/310 (12%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + + ++ P R+ A+ L + G + A+ + + Sbjct: 83 GEVDRSIRIHQNLIARPTLTTEQRDIAMMELGKDYLAAGFYDRAEEIFLNLVRQEDHSEE 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ Y + K+W +AI + K+K + +A L + + D Sbjct: 143 AEDQLIAIYQVTKDWQKAIDIIKSLKRKRQQSLKHLQAHLYCELA---DEASDSELKLKH 199 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-- 306 +++K A + +AK ++Q + +A+ +L + + + L E Sbjct: 200 LAQAIKQDPQCGRAMLTSAKLFLAQQEFGRAKEMLCR---------LKDADIELFPEALA 250 Query: 307 -TVGKLKRALRLEEINKESVES---------LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + E+ + +++ + G A + + P Sbjct: 251 IAKEVYQSTEDLGAYRELLREALEQGAGASVAITLAQQMIIQGETQDAEKLILDGLYRHP 310 Query: 357 RKEIFL-LL-AQIEQANSHNTDKILYWTQSALHAM---PDPLWIS-DDGYLSSV--WLPL 408 + F L+ QI+ A + L + P + + G+ S W Sbjct: 311 TMKSFQHLMKMQIQHAEDGQAKQSLNMLAELVEQQIKFR-PSYRCIECGFPSHTLYWH-- 367 Query: 409 SPISKTLCYF 418 P K+ Sbjct: 368 CPSCKSWGTI 377 >gi|99078715|ref|YP_611973.1| tetratricopeptide TPR_2 [Ruegeria sp. TM1040] gi|99035853|gb|ABF62711.1| Tetratricopeptide TPR_2 [Ruegeria sp. TM1040] Length = 572 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 85/266 (31%), Gaps = 35/266 (13%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA-QRYATKALD 182 LL+ + + + A ++ + + Q R FA+Y +GD A Q +A Sbjct: 132 LLDAWAYMGKGAVSQALDQFDAVAQQDGLRFFALYHKALALASVGDYEGADQLFAANEGQ 191 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFL---------------------NQKKKNAKEW 221 + + A +Q +A+ L + + + Sbjct: 192 LGRSSRRAAIARIQVLSQLGRNDQALEVLVDSFGEGFDPALTEFADQLAMGETLRFSITP 251 Query: 222 NRNRAILLIARSLENADKGDMIASYHD--AIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + SL A G+ + Y A + KL + A + +A L + Sbjct: 252 TARDGMAEVFYSLGQALSGEAASDYVLMYARMAAKLSPGHVDAVLLSAGLLDQMGRY--- 308 Query: 280 EVILEKIWKVNP--HPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + +K P HP+ + S N + +L + V + + Sbjct: 309 -ELSIATYKQVPRDHPDFHAAELGRAEALRRSANPQAAAEVLEQLARDFPQHVAVYIDLG 367 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358 + + + +A A++++P + Sbjct: 368 DLMRQQENYAEAAKAYTRALELSPDE 393 >gi|113476447|ref|YP_722508.1| hypothetical protein Tery_2862 [Trichodesmium erythraeum IMS101] gi|110167495|gb|ABG52035.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 448 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 13/264 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +I + + + + A + + + ++ ++ L G LN A +A++I+P Sbjct: 189 AEILVNQGELDAAIDCYQSLSKLLPENWLILHKLGKIFRETGKLNDAVEVFKRAIEINPK 248 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 PW + + + ++A+ +K + N A I L +G + + Sbjct: 249 FPWSYKNLADILYEQGKLNQAL-TCYRKLI-KNDPNIWDAYCKIGEIL--VKQGKINQAV 304 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301 + +KL + ++L Q K A + K ++ H +AN Sbjct: 305 VVYRKGIKLNPHLAKFHYLLGEALGKQKKWGSAIKVYSKAIELKANNHLFHRSLANALQE 364 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEI 360 L + + + EIN S + K+ ++ + A A++I P + Sbjct: 365 LGKLDEA--IISYRKAIEINSNSCWLYASLGKVYIQQKNWSDAIECFREAIQIKPDYDKA 422 Query: 361 FLLLAQIEQANSHNTDKILYWTQS 384 + +A I + +++ W Sbjct: 423 YEKIAYIFE-QLGDSEAAEKWRNK 445 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 48/110 (43%), Gaps = 2/110 (1%) Query: 118 NEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 N +L L + ++++ A + +++ A SL +G L+ A Sbjct: 314 NPHLAKFHYLLGEALGKQKKWGSAIKVYSKAIELKANNHLFHRSLANALQELGKLDEAII 373 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 KA++I+ ++ W+ ++ + Y+ K WS AI + + ++++ Sbjct: 374 SYRKAIEINSNSCWLYASLGKVYIQQKNWSDAIECFREAIQIKPDYDKAY 423 >gi|296159990|ref|ZP_06842810.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1] gi|295889736|gb|EFG69534.1| TPR repeat-containing protein [Burkholderia sp. Ch1-1] Length = 615 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 24/220 (10%), Positives = 60/220 (27%), Gaps = 11/220 (5%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A ++ A + E L++ + +L +G A + L++ P Sbjct: 112 AYAAAGRHEDAADAFEKSLRLQPNDASSHNNLGNALHALGRHTEAIAAFRRTLELRPGHA 171 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + G + Sbjct: 172 GALNNMGMSLNALGRAAEAIPCFQTALAAEPRF----VAAHFNLANTFDATGRHADAVAS 227 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303 +L L N A +L + + +A LE+ ++P +A + L Sbjct: 228 FRAALSLQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALG 287 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + + + + + + + + L + + Sbjct: 288 AHGPAVRA--FDQALRLRPDLASAHMNRALAWLALRDFAR 325 >gi|253565220|ref|ZP_04842676.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5] gi|251946685|gb|EES87062.1| TPR repeat-containing protein [Bacteroides sp. 3_2_5] Length = 283 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 8/167 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 + L I L + + A+ ++M + T + + Y R D A+ + Sbjct: 105 ILLNRAAIYLEQGMQDKAYVDYCQVMDVDKKNTEALLMRA-YIYMLRR-DYKGARLDYQR 162 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L+I P + ++ A+ LNQ E A+L +AR+ D Sbjct: 163 LLEIDPKNYNGRLGLGTLEQKENKFREALDILNQLLVEFPE----DAVLYVARADVERDM 218 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L +SI A + + Q KK A+ EK Sbjct: 219 KHDDLALVDLDEAIRLAPDSIDAYLLRGDIYLDQKKKSLAKADFEKA 265 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 66/194 (34%), Gaps = 16/194 (8%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q K + N + A+L L G + +L + ++ + Sbjct: 51 AEDLLKQALK-LEPKNAHNALLFSNLGLVQRKLGRYNDAVESYTYALNIAPLAVPILLNR 109 Query: 267 AKSLISQNKKRKA-------EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLE 318 A + Q + KA + +K + + Y + L + +L RL Sbjct: 110 AAIYLEQGMQDKAYVDYCQVMDVDKKNTEA----LLMRAYIYMLRRDYKGARLD-YQRLL 164 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377 EI+ ++ + + + + +A + P +++ A +E+ H+ Sbjct: 165 EIDPKNYNGRLGLGTLEQKENKFREALDILNQLLVEFPEDAVLYVARADVERDMKHDDLA 224 Query: 378 ILYWTQSALHAMPD 391 ++ A+ PD Sbjct: 225 LVD-LDEAIRLAPD 237 >gi|238014474|gb|ACR38272.1| unknown [Zea mays] Length = 489 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 54/155 (34%), Gaps = 7/155 (4%) Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-----KVN 290 +G ++ + E+ LC + A +L + R AE LE+ + Sbjct: 1 MEAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLKEDYAD 60 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 H ++ + H + E+ ++ ++ V++L + + ++ G +A Sbjct: 61 AHCDLGSA-LHAVGEDDRA-IQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTR 118 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + I P L + +++ + A Sbjct: 119 VLSIRPNHWRAQLNKAVALLGQGESEEAKKALKEA 153 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 57/197 (28%), Gaps = 35/197 (17%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G + A + +A + P + + E+ A L + +++ Sbjct: 2 EAEGMVLGACEHYREAAILCPSHARALKLLGSALFGVGEYRAAEKALEEAIFLKEDY--A 59 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + +L G+ + + ++ L + A + + +A Sbjct: 60 DAHCDLGSALHAV--GEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRA----- 112 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 A +YT +L I + + + L G ++A Sbjct: 113 -----------AEMYTRVL---------------SIRPNHWRAQLNKAVALLGQGESEEA 146 Query: 345 HAKAMLAMKIAPRKEIF 361 A K+ R E++ Sbjct: 147 KKALKEAFKMTQRVEVY 163 >gi|32475228|ref|NP_868222.1| hypothetical protein RB8167 [Rhodopirellula baltica SH 1] gi|32445769|emb|CAD78500.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 922 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 7/218 (3%) Query: 165 CRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 GD A + +AL P ++ V++ L E A L + + A Sbjct: 125 LTQGDYADALQTYREALQRYPTSIALRYMGLDVLRFNGLHDEVGTAEADLFAQMQRAFAG 184 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQNKKRKAE 280 R L+ A D + ++ + + A + A+ I + + A Sbjct: 185 YITRDNLIAAGRFLTGRGEDARKVLEMFYDRVRDRDPDYLDAYLATAELAIRKGDFQVAA 244 Query: 281 VILEKIWKVNP-HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 L++ K+ P++ ++ S + ++ IN + + SL +++ A++ Sbjct: 245 NTLQQALKLEEETPDLHHLLAKAMESSDGQAAAEQIAIALRINPQHLPSLQWLAERAIDR 304 Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375 D+A A ++I P + + L+A I Sbjct: 305 ERYDEAKDVANQMLQINPHEPSAWALMAVISHLRGEYD 342 Score = 36.5 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 106/342 (30%), Gaps = 86/342 (25%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---------- 152 A + + +E LL Q L + Y A + LQ T Sbjct: 98 AAATTAASEVERGVWSERWPRLLI-QCQLTQGDYADALQTYREALQRYPTSIALRYMGLD 156 Query: 153 --REFAVYS--------LYFESCR-------IGDLNSAQRY-------ATKALDIS---- 184 R ++ L+ + R +L +A R+ A K L++ Sbjct: 157 VLRFNGLHDEVGTAEADLFAQMQRAFAGYITRDNLIAAGRFLTGRGEDARKVLEMFYDRV 216 Query: 185 ----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 PD A + + ++ A L Q K E L+A+++E++D Sbjct: 217 RDRDPDYLDAYLATAELAIRKGDFQVAANTLQQALK--LEEETPDLHHLLAKAMESSDGQ 274 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299 A+ ++ + + A+ I + + +A+ + ++ ++NPH P + Sbjct: 275 AAAEQIAIAL---RINPQHLPSLQWLAERAIDRERYDEAKDVANQMLQINPHEPSAWALM 331 Query: 300 T---HLLSENTVGKLKRALRLEEI---------------------------------NKE 323 HL E V KL RA L + Sbjct: 332 AVISHLRGEYDVEKLMRAAALSTWEQNPNVDHLIGRKLSEKYRFAEGAAYQNLALDADPL 391 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL 364 + + +++ L +G + A K P + + L+ Sbjct: 392 HLAASFQLAQDMLRLGEEEIGWEIAGEVAKSDPYNVVAYNLM 433 >gi|157812766|gb|ABV81128.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Nebalia hessleri] Length = 289 Score = 49.9 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + + P A Sbjct: 34 GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGHTEEATKLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGHTEEATKLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 22/178 (12%), Positives = 54/178 (30%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G ++ A+ AL + P + A + + Sbjct: 26 LANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGHTEEATKLYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E+ A + +G + + E++++ A +L + A Sbjct: 86 EF----AAAHSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N ++ ++ + ++ ++ Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 52/176 (29%), Gaps = 6/176 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q + A E L++ T ++ +L G A + KAL++ P+ Sbjct: 27 ANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGHTEEATKLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNL 196 >gi|296840828|ref|ZP_06863542.2| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC 43768] gi|296839835|gb|EFH23773.1| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC 43768] Length = 402 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 111/349 (31%), Gaps = 53/349 (15%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ + QQ ++ L ++ + + A +L P T Sbjct: 70 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRTLLDSPDT--VGEKR 124 Query: 157 VYSLYFESC---RIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +AI Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LSLQDGEMAREARQHLLNIYQQDRDWEKAIETA 181 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAK 268 + + + A + + K + + A+E+ K C A++ Sbjct: 182 QLLSHDEQTYQFEIAQFYCELAQASLFKSNFDIARFNVGKALEANKRC---TRANMILGD 238 Query: 269 SLISQNK---KRKAEVILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRALRL 317 Q +A +E+ + ++ + Y E + +L + L Sbjct: 239 IEYRQGNFPASVEAYAAIEQQNHAYLSMVGEKLYDAYAEQGKPEEGLNRLIGYMQTFPEL 298 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL-AQIEQANS--- 372 + IN +SL++ + +A A+ ++ P ++ LL +I + Sbjct: 299 DLINVVYEKSLLLRGE--------KEAAQTAIELVRRKPDLNGVYRLLGLRISDMDPTWK 350 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + D + L ++ + + S W P F Sbjct: 351 ADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395 >gi|134288421|ref|YP_001110584.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4] gi|134133071|gb|ABO59781.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4] Length = 273 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Query: 160 LYFESCRIG--DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L++E+ + D ++A+ +AL ++PD T + V ++ ++ AI K Sbjct: 144 LFYEARDLEEVDSDAAEAMYREALLLAPDYINATLNLGCILVDSERFNDAIDVYRAALKY 203 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A L + D G + + E ++ N A AA+ + Sbjct: 204 QPD----DATLQFNIGVALEDSGQLREALDAYQECIRRSPNFADAHFNAARIHEELGEAT 259 Query: 278 KAEV 281 KA Sbjct: 260 KAIR 263 >gi|7670028|dbj|BAA94982.1| unnamed protein product [Arabidopsis thaliana] Length = 744 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 84/278 (30%), Gaps = 24/278 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMML---QIPA 151 NI AR + + + NEY+ LLE + +Y A + Sbjct: 285 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKA----GRYEQARYLFKQATICNSRSC 339 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A L + R +A++ KA+ SP + R L Sbjct: 340 ASWLAWAQLEIQQER---YPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL 396 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 K N +LL + L + + +L I Sbjct: 397 ----KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEW 452 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESV 325 + A + ++ ++ + E A+ E G L A RL IN +S Sbjct: 453 KEGNTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSY 512 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + +++ + G ++A L + + ++ + Sbjct: 513 VTWMTWAQLEEDQGDTERAEEIRNLYFQQSLYINLYFI 550 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 66/233 (28%), Gaps = 37/233 (15%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+G++ A+ A + S+A L + K Sbjct: 249 RLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIY 308 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L + + G + + ++ +IC ++S Sbjct: 309 QTLALLEAK----AGRYEQARYLFKQA----------TICNSRSC--------------A 340 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 W +A + E K + + + ++ + + +G++++ Sbjct: 341 SW-------LAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGR 393 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA--LHAMPDPLWIS 396 + + PR + L + + + + + A L P+WI+ Sbjct: 394 KLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIA 446 >gi|91202455|emb|CAJ72094.1| similar to Tpr region of human peroxisomal targeting signal-1 receptor Pex5 [Candidatus Kuenenia stuttgartiensis] Length = 312 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 13/219 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + E LV L ++ + + + A E L I A Sbjct: 88 GMLDEAVDAYKKATELNPSSEEALVGL--GKVLNKKAKSDEAITAFEKALAININNAEAY 145 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKK 216 L G + A R +A+ I+PD + Y ++ AI L K Sbjct: 146 EGLGLVHVHKGGPDEAIRLFNRAVAINPDLVESRYNLGILYAKNGQFEEAIAEWLKAIKI 205 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 N K + + + L + D IA + +A+E+ + + + I + Sbjct: 206 NPKRTEFHYNLGIAYTKLGKLE--DAIAVWQNALENTEEISSFL---YLIGLVYIEKGDA 260 Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310 + AE L K +V+P H + +Y + + Sbjct: 261 KSAESFLNKALEVDPEFYDVHKVLEELYRSQGMHSEADR 299 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 79/227 (34%), Gaps = 19/227 (8%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A +E PA Y+L S + G L+ A KA +++P + + + Sbjct: 61 EAAKAAVEANPNDPAV----YYNLAVLSDKKGMLDEAVDAYKKATELNPSSEEALVGLGK 116 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + AIT + N N A L + KG + ++ + Sbjct: 117 VLNKKAKSDEAITAFEKALA----ININNAEAYEGLGLVHVHKGGPDEAIRLFNRAVAIN 172 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGK 310 + + + + +A K K+NP H + YT L E+ + Sbjct: 173 PDLVESRYNLGILYAKNGQFEEAIAEWLKAIKINPKRTEFHYNLGIAYTKLGKLEDAIAV 232 Query: 311 LKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLAMKIAP 356 + AL N E + S + ++ + +E G A + A+++ P Sbjct: 233 WQNALE----NTEEISSFLYLIGLVYIEKGDAKSAESFLNKALEVDP 275 >gi|189426649|ref|YP_001953826.1| hypothetical protein Glov_3605 [Geobacter lovleyi SZ] gi|189422908|gb|ACD97306.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 248 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 35/196 (17%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R DL + +AL + P + Y+ W AI + K+ + R+ Sbjct: 76 KRRLDLAEQRYL--RALALRPKYSEARNDLGVLYLETGRWDNAIQQF-RAVKDDLFYPRH 132 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LI L KGD A+ + + + + + + L +Q K ++A Sbjct: 133 D-HALINLGLAYLGKGDYSAALEELYTARSADPRNPIVKVAIGRVLFAQGKTQQA----- 186 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 A+ Y + EI + ++ + ++ + A Sbjct: 187 -----------ADEYRRAI---------------EIAPDYAQAHFQLGLALMKQSQLAAA 220 Query: 345 HAKAMLAMKIAPRKEI 360 A ++IAP EI Sbjct: 221 RAAFKEVVRIAPDSEI 236 >gi|108759093|ref|YP_633470.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108462973|gb|ABF88158.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 841 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 72/228 (31%), Gaps = 16/228 (7%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE- 141 KG + L G AA I A +M + +Q + L L + + + A Sbjct: 625 KGRRLLAEGNFDAAAEEIRKAIRMDASRAQFYV----ELAKSLMGK---QGGEKDAAEAL 677 Query: 142 --KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQY 198 L+ M P + + R G L+ A +A+ P A+ Y Sbjct: 678 QTALKTMGDSP--KLVVMLG--NAYRRQGKLDEALAQYQRAVKDPKAKNPEARLAMGAIY 733 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 +W A L + + + AI L KGD + +L + Sbjct: 734 RERSKWDLAQEQLEKASQEFLGQSDRAAIALTELGRVFQSKGDTAKADETYQRALNADEA 793 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLLSE 305 A A L +K+ +L + + K P E A+ L Sbjct: 794 YSPAYYFYATLLSKDSKQGAKAKMLAQEYLKREPSGEHASAARSLAGG 841 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 115/344 (33%), Gaps = 50/344 (14%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL+ + A ++ R S Q ++ Y + Q A + L Sbjct: 454 LTLGLIQMNAGDLERGR--DSLDRAQLLSPDDPRTYASLGAVYRRLGQDAAAWRNYDSAL 511 Query: 148 ---QIPATREFAVYSLYFE--------------SCRIGDL------NSAQRYATK----- 179 + L E D +A A Sbjct: 512 RYGKDHPESLLGRSLLMLEQDSPNFELAHTMLKKLLESDPPPSPRQLAAAHMARSLLISR 571 Query: 180 ----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +D+ PD + + + + ++ +A T + + ++ ++ L + + Sbjct: 572 VSTAMVDLKPDM---QQKLAEATAVPQDKDKARTEMLKSEETGFSLDKQNPELHLIKGRR 628 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI-SQNKKRKAEVILEKIWKV-NPHP 293 +G+ A+ + +++++ + + AKSL+ Q ++ A L+ K P Sbjct: 629 LLAEGNFDAAAEEIRKAIRMDASRAQFYVELAKSLMGKQGGEKDAAEALQTALKTMGDSP 688 Query: 294 EI----ANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 ++ N Y + + + +RA++ + ++ E+ + + I E D A + Sbjct: 689 KLVVMLGNAYRRQGKLDEALAQYQRAVK--DPKAKNPEARLAMGAIYRERSKWDLAQEQL 746 Query: 349 MLAMKI--APRKEIFLLLAQIEQA--NSHNTDKILYWTQSALHA 388 A + + L ++ + + +T K Q AL+A Sbjct: 747 EKASQEFLGQSDRAAIALTELGRVFQSKGDTAKADETYQRALNA 790 >gi|118395433|ref|XP_001030066.1| SLEI family protein [Tetrahymena thermophila] gi|89284354|gb|EAR82403.1| SLEI family protein [Tetrahymena thermophila SB210] Length = 2397 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 99/260 (38%), Gaps = 22/260 (8%) Query: 130 ALAERQYNIAHEKLEMMLQIPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + A + + ++I + LY+E + + A Y KA++I+ Sbjct: 218 YQNTSKKEEAIKHYKKAIEIDPKYFNAQFNLGL--LYYEEQKD---DEALTYFQKAIEIN 272 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P +P + Y + A+ + + ++++ +A +N + Sbjct: 273 PKSPDSYNNIGLVYYHKNMITEALEYYKKALDVDPQYHKAYHNSALAYEKQNLIQN---- 328 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299 + +S+++ + + I QN + +KI +++P H ++A +Y Sbjct: 329 AIESYKKSIEMNPKFLKSLTNLGDLCIEQNLADEGIECFKKIIQIDPYSHYDHFQLAFLY 388 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RK 358 + +K ++ E+N E + + + I + D+A + A+++ P Sbjct: 389 QD--KDMNEEAVKTYKKVIELNPEYTNAYLNLGIIYSDQKMFDEAQSCFKKAIQVDPNYY 446 Query: 359 EIFLLLAQIEQANSHNTDKI 378 + + A++ + + T+ I Sbjct: 447 KAYYRSAEVYELQGNTTEAI 466 >gi|86130600|ref|ZP_01049200.1| conserved hypothetical protein [Dokdonia donghaensis MED134] gi|85819275|gb|EAQ40434.1| conserved hypothetical protein [Dokdonia donghaensis MED134] Length = 673 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 100/317 (31%), Gaps = 44/317 (13%) Query: 94 SIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ + AR + + + + E V L + L + + A + E ++ +T Sbjct: 60 ALGLSGESGKARTLFTNLKADYPTDFE--VGLNYAESLLWDSDFGAAKDFYETLVAKDST 117 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA-------VVQQYVLAKEWS 205 A+ + + ++A Y KAL + P + Q A ++ Sbjct: 118 SFSALLGYANTLSNLKEYDAAIAYVNKALTVQPGNANAAVSKKFMRLGKANQLTTAFQYD 177 Query: 206 RAITFLNQKKKN-AKEWNRNRAILLIARSLENADKG------------------------ 240 AI L ++ K+ A+ + ++ + Sbjct: 178 AAIQLLKSALEDMPKDQQIISALANTYIAKKDYENANTMYSKLSDTLTSQVGKSLVAHLQ 237 Query: 241 -DMIASYHDAIESLKLCDNSIMASICAAKSLISQ----NK---KRKAEVILEKIWKVNPH 292 D + A ES+ I A + I K R A L+ + N Sbjct: 238 KDDKLALSLAQESIAFAKADTTKIITANERYIQALIWNGKYATARTAITDLKSTFPTNAR 297 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + ++ + E + S + + ++ G++D+A+A A + Sbjct: 298 VAALKATLGMYTGTFKKSIEVYNGILEKDSASFDGNLGIANAYRAQGNLDEAYAFAKNTL 357 Query: 353 KIAPRKEIFL-LLAQIE 368 P ++ L+ IE Sbjct: 358 TFYPNQKDATGLMKTIE 374 >gi|197102006|ref|NP_001125315.1| pre-mRNA-processing factor 6 [Pongo abelii] gi|55727663|emb|CAH90585.1| hypothetical protein [Pongo abelii] Length = 941 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 50/295 (16%), Positives = 96/295 (32%), Gaps = 42/295 (14%) Query: 134 RQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + E LE +LQ P + GD+ +A+ A +P++ Sbjct: 584 GKNHGTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLTGDVPAARSILALAFQANPNSE 642 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAILLIARSL 234 + A V+ E+ RA L + + +A A L +L Sbjct: 643 EIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEAL 702 Query: 235 EN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + K M + + LK C +S + ++ + + Sbjct: 703 RHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRT 762 Query: 280 EVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALE 337 ILEK NP +P + L + + A L +E S ++ S+ A+ Sbjct: 763 RAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIF 819 Query: 338 MGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + Q K++ A+K + L +A++ + K W + D Sbjct: 820 LEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 873 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ + I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQFVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|70989773|ref|XP_749736.1| mRNA splicing factor (Prp1/Zer1) [Aspergillus fumigatus Af293] gi|66847367|gb|EAL87698.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus fumigatus Af293] Length = 926 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 104/300 (34%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G+++ A+R +A + + Sbjct: 578 AADLERNHGSKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQN 636 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240 P+ + A V+ A + +A L ++ A + R L N D+ Sbjct: 637 PNNEDIWLAAVKLEADADQTDQARELLATARREAGTDRVWIKSVAFERQLGNIDEALDLV 696 Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + C S+ + A++ Sbjct: 697 NQGLQLYPKADKLWMMKGQIYEYQNKYPQAREAYSTGTRACPKSVPLWLLASRLEEKSGA 756 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E + +A L +E S ++ S+ Sbjct: 757 VVKARSVLDRARLAV--PKSAELWTESVRVERRANNIGQAKVLMAKALQEVPTSGLLWSE 814 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + +A + K+ +F+ +A+I +K + W + A+ + D Sbjct: 815 SIWHLEPRAQRKARS-LEAIKKLENDPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 872 >gi|197120873|ref|YP_002132824.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K] gi|196170722|gb|ACG71695.1| MJ0042 family finger-like protein [Anaeromyxobacter sp. K] Length = 1144 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 7/248 (2%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + + + A + A L A +L + GDL Sbjct: 712 ALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEALARDAAAVEPRVALGRLALARGDLP 771 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A+ +A++ P P A+ + + A + A ++ Sbjct: 772 AAREALAQAVEKGPRDPAAHAALGELRAAD----GDAAGAEAAYRAALALDAEHAAAVLG 827 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +GD+ A+ + +L L S A + S KAE L + P Sbjct: 828 LARLAQARGDVAAAREGLVRALALEPRSAEAQLALGTLEWSARDLAKAEAALAIAVDLQP 887 Query: 292 HPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 A L + +K + E+ + + L G A + Sbjct: 888 RNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRALLARGETPAALVRL 947 Query: 349 MLAMKIAP 356 A++++P Sbjct: 948 RKAVELSP 955 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 6/201 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G +++A ++P AR + + + ++ A+ A L + Sbjct: 761 GRLALARGDLPAAR--EALAQAVEKGPRDPAAHAALGELRAADGDAAGAEAAYRAALALD 818 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A AV L + GD+ +A+ +AL + P + A+ A++ + Sbjct: 819 AEHAAAVLGLARLAQARGDVAAAREGLVRALALEPRSAEAQLALGTLEWSARD----LAK 874 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + A L ++GD A+ + + A + ++L Sbjct: 875 AEAALAIAVDLQPRNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRAL 934 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 +++ + A V L K +++P Sbjct: 935 LARGETPAALVRLRKAVELSP 955 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 81/280 (28%), Gaps = 22/280 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G ++A + A + + + AL + + A LE + Sbjct: 516 GDAALARGDAVKAAAAFQRLGSLEQGPRAPMGL---ARAALLRGKPDEARPTLEKLAAAD 572 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A A L + GD+ A+ + ++P + + + Sbjct: 573 AAYLPARLELAALAEAAGDVEGARTH------LAPVLADAAQPRLAPLERGRARMVEAAL 626 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI------ 264 L++ A + + L A A + ++ ++ S + Sbjct: 627 LDRSAATAADAEKALLAALDADPRLAAARAALVRQRLRRGDAAGAVAASDPVAAEAASDP 686 Query: 265 ----CAAKSLISQNKKRKAEVILEKIWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRL 317 ++L + A + ++ + P P + A + Sbjct: 687 ALAAARVRALALAGRALDAAQLADQALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEA 746 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + +VE V + ++AL G + A A++ PR Sbjct: 747 LARDAAAVEPRVALGRLALARGDLPAAREALAQAVEKGPR 786 >gi|291613155|ref|YP_003523312.1| hypothetical protein Slit_0686 [Sideroxydans lithotrophicus ES-1] gi|291583267|gb|ADE10925.1| Tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus ES-1] Length = 374 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 60/201 (29%), Gaps = 18/201 (8%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL A Y A + +L A A+ L + + G ++AQ Y + L + Sbjct: 192 LLGAYQAYQRGDYTTATQAYREVLAKDARNRDALLGLAAIAQQQGQEDAAQHYYRQLLVL 251 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P P A++ A + K+ L + AD Sbjct: 252 DPKDPIAESALMAYAPDAGN-------TESRLKSLLAEQPRSGTLNFSLGNYYADISSWG 304 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + + L + + A SL K++ A ++ + + Sbjct: 305 DAQQYYFNAHTLEPTNAQFTFNLAVSLDHLGKRKLAAQYYQQA-----------LQLDVS 353 Query: 304 SENTVGKLKRALRLEEINKES 324 + + RL+E+N Sbjct: 354 GHSGFDHAQAQQRLDELNPAH 374 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 13/172 (7%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL + + A + + V + + + L+ L IA + Q + A + Sbjct: 191 ALLGAYQAYQRGDYTTATQAYREVLAKDARNRDALLGL--AAIAQQQGQEDAAQHYYRQL 248 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQR--YATKALDISPDAPWVTEAVVQQYVLAKEW 204 L + A +L + G+ S + A P + + ++ Y W Sbjct: 249 LVLDPKDPIAESALMAYAPDAGNTESRLKSLLAE-----QPRSGTLNFSLGNYYADISSW 303 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 A + + E + +A SL++ G + ++L+L Sbjct: 304 GDAQQYYFNA--HTLEPTNAQFTFNLAVSLDHL--GKRKLAAQYYQQALQLD 351 >gi|149923909|ref|ZP_01912297.1| putative lipoprotein [Plesiocystis pacifica SIR-1] gi|149815252|gb|EDM74799.1| putative lipoprotein [Plesiocystis pacifica SIR-1] Length = 1338 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 101/308 (32%), Gaps = 30/308 (9%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A L R + + L L + AL + A + + Sbjct: 403 AGWTELGRGGRARAMKLDGPVYAPLRAYLALDEALILDDTDAAEGFAQALSDRD---FEG 459 Query: 157 VY----SLYFESCRIGDLNS--------AQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + L D + Q +AL++ P +++Q + E Sbjct: 460 LAFPDAHLLLAQFERRDPSRGKSSSGVRQQTQLERALELDPGLKRAHLQLLEQRLNRGES 519 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + + + + +L + R +G + S + + + Sbjct: 520 AEVVEAFEALEHTGNDS----LLLALLRYEAYRAEGSDVQSQAALEVAAAYHPTNCE--V 573 Query: 265 CAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-- 321 AA+ ++++ + +AE L ++ + P ++ +++ A L Sbjct: 574 LAAQREQARDRGQIEAEDALVEVLERCP----GSLAMRARQATARQRIEAAKALWSEQLD 629 Query: 322 --KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 + +E++ ++++A+ G+ +A A +++AP + + ++ A ++ Sbjct: 630 RVPDDMEAMEALAQLAVTAGNYAEAIAWHDRILRLAPYRAVSMVALADLHAQLDAPEQAR 689 Query: 380 YWTQSALH 387 + +A+ Sbjct: 690 AFVLAAIE 697 >gi|326572372|gb|EGE22365.1| tetratricopeptide TPR_2 [Moraxella catarrhalis BC7] Length = 671 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 8/180 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + + RA+ E + A + R+L + S A Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A + + +A ++ I +P ++ I T ++ K Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373 L+ + + + V+ + I + + A A+ I P F L I +A + Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330 Score = 36.8 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314 + ++ A+ + R+A I + +K N + E L A Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ N + + + V+ +AL+ G +QA A + PR ++ +L I Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258 >gi|326567034|gb|EGE17157.1| tetratricopeptide TPR_2 [Moraxella catarrhalis 12P80B1] gi|326569561|gb|EGE19615.1| tetratricopeptide TPR_2 [Moraxella catarrhalis BC8] Length = 671 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 8/180 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + + RA+ E + A + R+L + S A Sbjct: 157 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 210 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A + + +A ++ I +P ++ I T ++ K Sbjct: 211 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 270 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373 L+ + + + V+ + I + + A A+ I P F L I +A + Sbjct: 271 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 330 Score = 36.8 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANIY-THLLSENTVGKLKRA 314 + ++ A+ + R+A I + +K N + E L A Sbjct: 148 PDLY--ALMDAEFAADRGDIRRALNIYKAESFKKNATNVFERALSLSIEYETPAQSLAFA 205 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ N + + + V+ +AL+ G +QA A + PR ++ +L I Sbjct: 206 TAWQDRNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGI 258 >gi|192292805|ref|YP_001993410.1| Tetratricopeptide TPR_4 [Rhodopseudomonas palustris TIE-1] gi|192286554|gb|ACF02935.1| Tetratricopeptide TPR_4 [Rhodopseudomonas palustris TIE-1] Length = 715 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 96/289 (33%), Gaps = 13/289 (4%) Query: 106 MHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 +S ++ E V L+ ++ + Q + A + +L+ A++ Sbjct: 5 RSKAISSRNASDKAYEPAVLLMRARVLHQQGQLDEARSAYKKVLKKAPDNFMALHFYALA 64 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G+ + +AL P + + + ++ ++ ++ Sbjct: 65 EYQSGNAELGIKTLKRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTL-- 122 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + R L + + ++++L + +L + +A Sbjct: 123 --MLAYANRGLALSALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGRYTEALESY 180 Query: 284 EKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 +K +++P ++ A Y L + L R I K V++ + ++ L M Sbjct: 181 DKAIEIDPLSDVAFMNRAGTYKDLKQLDKA--LASYDRALSIGKRPVQAGLARAETLLFM 238 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 ++ A A +K+ P I L L A+ + + + AL Sbjct: 239 RNVKDAMATCTAVLKVEPNSAIALTLLGNCMASLGDAETAIALHSRALE 287 >gi|148654219|ref|YP_001274424.1| hypothetical protein RoseRS_0031 [Roseiflexus sp. RS-1] gi|148566329|gb|ABQ88474.1| TPR repeat-containing protein [Roseiflexus sp. RS-1] Length = 522 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 60/171 (35%), Gaps = 15/171 (8%) Query: 200 LAKEWSRAITFLNQKKK--------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 L +++ AI A+ ++R RAI+ + A + D + + +E Sbjct: 41 LRADYANAIEHFKAALIAAYIEGEERAQIYDRERAIIYLYIGNALAYQEDWEGALREYLE 100 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 +++ A + +Q + +A ++ + NP H + Y L ++ Sbjct: 101 AVQTDPQLAEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNPRLYEAHFSLGRCYQRL--DD 158 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + ++ E + + G+ + A A+++ P Sbjct: 159 AGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 48/280 (17%), Positives = 94/280 (33%), Gaps = 27/280 (9%) Query: 106 MHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY-SLY 161 ++ HN L + + A+ + P E Y L Sbjct: 127 RAIAAFKEAIEHNPRLYEAHFSLGRCYQRLDDAGRAYIHYDQACQARPQAAEPRYYMGLM 186 Query: 162 FESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAK--EWSRAITFLNQKKKN 217 + G AQR +AL + P +P + + V+ + +W ++ +++ Sbjct: 187 HQ--SHGAHELAQRCFAEALRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGY 244 Query: 218 AKEWNRNRAILLIARSLENADK------GDMIASYHDAIESLKLCDN----SIMASICAA 267 +E R LL R E+ + +A+E+ + A I + Sbjct: 245 EEEAERIYRALLQWRPEEHYARYLLGNLLARARRLDEALEAYAQIPPQDRYYVDARIRIS 304 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINK 322 L QNK R+A L + K+ HP ++ ++ G +K R ++ Sbjct: 305 AILKLQNKMREAYDTLFECAKL--HPTNGQLFLNMGKLLYDMNKHAGAVKAFERAVQLLP 362 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 ++ ++ + MG A A A+++AP Sbjct: 363 NDPQAHYLLGFMYNLMGREGWALAAWRKAVELAPDAHSLR 402 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 62/218 (28%), Gaps = 32/218 (14%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D A R +A+ P + + RAI + ++ A Sbjct: 88 QEDWEGALREYLEAVQTDPQLAEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNP--RLYEA 145 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + R + D D +Y ++ + + S A+ + Sbjct: 146 HFSLGRCYQRLD--DAGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEA 203 Query: 287 WKVNPH---PEI-------------ANIYTHLLS-------ENTVGKLKRALRLEEINKE 323 +V P PE+ A Y L + E ++ RA L + E Sbjct: 204 LRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGYEEEAERIYRA--LLQWRPE 261 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + ++ + +D+A +I P+ + Sbjct: 262 EHYARYLLGNLLARARRLDEA---LEAYAQIPPQDRYY 296 >gi|91784833|ref|YP_560039.1| hypothetical protein Bxe_A0959 [Burkholderia xenovorans LB400] gi|91688787|gb|ABE31987.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 620 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 24/220 (10%), Positives = 60/220 (27%), Gaps = 11/220 (5%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A ++ A + E L++ + +L +G A + L++ P Sbjct: 117 AYAAAGRHEDAADAFEKSLRLQPNDASSHNNLGNALHALGRHTEAIAAFRRTLELRPGHA 176 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + G + Sbjct: 177 GALNNMGMSLNALGRAAEAIPCFQTALAAEPRF----VAAHFNLANTFDATGRHADAVAS 232 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303 +L L N A +L + + +A LE+ ++P +A + L Sbjct: 233 FRAALSLQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALG 292 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + + + + + + + + L + + Sbjct: 293 AHGPAVRA--FDQALRLRPDLASAHMNRALAWLALRDFAR 330 >gi|28868406|ref|NP_791025.1| hypothetical protein PSPTO_1193 [Pseudomonas syringae pv. tomato str. DC3000] gi|28851644|gb|AAO54720.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] gi|331015315|gb|EGH95371.1| hypothetical protein PLA106_05102 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 654 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 17/208 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD +A A A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL R GD + D ++ L ++ A + + ++A L Sbjct: 246 NDATLLAQRGQLRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPKEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVESLVIVSK 333 +K P E+ Y + + G L KR R + ++ S + S Sbjct: 303 QKARDAGQLQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYSAMRSSD 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 A + + P +++F Sbjct: 363 DAQAITYFKRVLEYQQAGDLQMPDQQVF 390 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 41/248 (16%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--- 220 + D + A A +AL DA + + + A+ ++ +++ + Sbjct: 44 AYNRKDYDLAIAKAREALRQRGDAEQLHDLI------------ALAERDKYRRDHPQRFP 91 Query: 221 -WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + ++L + D S + A +++ ++ + ++L Q + +A Sbjct: 92 KARVKPGYVEGNQALRAYARRDYDGSANHARKAIAQAPKNLDYRMMLIEALQRQQRLDQA 151 Query: 280 EVILEKIWKV-NPHPEI----------------ANIYTHLLSENTVGKLKRALRLEEINK 322 +V + + P P + A Y L + + A Sbjct: 152 QVAINDAEQAVGPQPVLTRRRQAIQEQVAVNKAAAGYKALARGDNETAVSEARDAVRSFP 211 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN----SHNTDKI 378 + + ++ + G +A + A A+ + LLAQ + + D Sbjct: 212 KQMAYRKLLVSALIAQGQYAEARSAATEALALNGND--ATLLAQ--RGQLRQRLGDQDGA 267 Query: 379 LYWTQSAL 386 AL Sbjct: 268 RQDFAQAL 275 >gi|330862164|emb|CBX72327.1| cellulose synthase operon protein C [Yersinia enterocolitica W22703] Length = 687 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVY-----LL--EVQIALAERQYNI 138 GL A + A ++ + + L+ LL E AL + Sbjct: 300 GLAYARAGDRAQALRLFEQAQKSDKDGLKSDKWASLIKTNRYWLLNDEGDKALKTGNTAL 359 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + QI + +A+ L + D +A+++ +AL + P + Y Sbjct: 360 AQQKYQQARQIDGSDSYALIGLGDVAVARHDDKTAEQHYQQALRLDPANSSAVRGLANIY 419 Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A+ +LN Q+ K N + +L ++ A + + ++ Sbjct: 420 QRESP-QKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAETLAAQQQWHQAAEKYRQAQ 478 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 K+ N + + A++L +A+ Sbjct: 479 KMAPNDVWITYRLAQALAQDGHLAQADA 506 >gi|298244613|ref|ZP_06968419.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297552094|gb|EFH85959.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 853 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 76/213 (35%), Gaps = 35/213 (16%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + Q ++ +AIT + A+ ++ + G+ + + Sbjct: 410 AYQRLEQFQAALADFQQAITLFPR-----------FALAYANQAGVYRELGEFQKAQDNI 458 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS----- 304 ++L+L ++A A L + +A + ++NPH + + L Sbjct: 459 QQALELEPTLVLAYNEQAMLLHKLGRHEEALACIRHAQEINPHD--THTWVALGGISYDL 516 Query: 305 -ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR------ 357 E ++ L E+ S + ++ I++++G +A + A K+ P Sbjct: 517 EEYEQARIAFTRAL-ELEPASADGWYLLGCISIKLGDYSRALEELSQAAKVRPTYTRAYH 575 Query: 358 KEIFLL---------LAQIEQANSHNTDKILYW 381 + LL L + E+A + + YW Sbjct: 576 ERALLLYTLQQYEQALVEFEKAFALDPTNAKYW 608 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 86/251 (34%), Gaps = 23/251 (9%) Query: 118 NEYLVYLLEVQIALA--ERQYNIAHEK-LEMMLQIPA-TREFAVYSLYFESCRIGDLNSA 173 E L Q + ++Y A E + P +A +L + D +A Sbjct: 295 QEASAQLWADQALVLHDAKRYEEAKETCSRALALNPRFYEAYAHRALI--KYELKDYAAA 352 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 ++ +PD + Y +++ +AI + + E + A++ R Sbjct: 353 LEDLNHVVEFAPDLQVAYKYRALVYHKLEQFEQAI----ANQTHILERDDADAVMYNNRG 408 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 A+ D +++ L +A A + +KA+ +++ ++ P Sbjct: 409 YAYQRLEQFQAALADFQQAITLFPRFALAYANQAGVYRELGEFQKAQDNIQQALELEPT- 467 Query: 294 EIANIYTH--------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + Y E + ++ A EIN + V + I+ ++ +QA Sbjct: 468 -LVLAYNEQAMLLHKLGRHEEALACIRHAQ---EINPHDTHTWVALGGISYDLEEYEQAR 523 Query: 346 AKAMLAMKIAP 356 A+++ P Sbjct: 524 IAFTRALELEP 534 Score = 36.5 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 16/199 (8%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 + A+ T+AL++ P + + + ++SRA+ L+Q K + R Sbjct: 517 EEYEQARIAFTRALELEPASADGWYLLGCISIKLGDYSRALEELSQAAKVRPTYTR---- 572 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 R+L + + ++ L + L+ +L ++ Sbjct: 573 AYHERALLLYTLQQYEQALVEFEKAFALDPTNAKYWSEFTSLLLKLGGNDLVRDMLLRV- 631 Query: 288 KVNPHPEIANIYTHLLSENTV-GKLKRALRLEE----INKESVESLVIVSKIALEMGSID 342 + HP ++ + L S + + A + N + + + + LEM + Sbjct: 632 -IQRHPTLSEAWFQLASCSAYNDRFVSAHQQYSRALKFNPHNAFAYAMRALCNLEMKHYN 690 Query: 343 QA-----HAKAMLAMKIAP 356 A A A+ P Sbjct: 691 SALVDCRRASALDPEHYLP 709 >gi|68250245|ref|YP_249357.1| tetratricopeptide repeat protein [Haemophilus influenzae 86-028NP] gi|145630848|ref|ZP_01786625.1| hypothetical protein CGSHi22421_02601 [Haemophilus influenzae R3021] gi|229846874|ref|ZP_04466981.1| hypothetical protein CGSHi7P49H1_02598 [Haemophilus influenzae 7P49H1] gi|68058444|gb|AAX88697.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae 86-028NP] gi|144983508|gb|EDJ90976.1| hypothetical protein CGSHi22421_02601 [Haemophilus influenzae R3021] gi|229810363|gb|EEP46082.1| hypothetical protein CGSHi7P49H1_02598 [Haemophilus influenzae 7P49H1] Length = 396 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVEILENVLEQNPDYTGEILSP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + + K+ E A AK + P IF + QI+ A Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKNPSTLIFHRFMQYQIDDAEDG 339 >gi|149919865|ref|ZP_01908341.1| hypothetical protein PPSIR1_12208 [Plesiocystis pacifica SIR-1] gi|149819312|gb|EDM78745.1| hypothetical protein PPSIR1_12208 [Plesiocystis pacifica SIR-1] Length = 375 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 44/348 (12%), Positives = 115/348 (33%), Gaps = 40/348 (11%) Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIP- 101 ++ L L + + + P R Y+ +A + Sbjct: 3 FVIIALVCLLVGFGVGWWYV-----APQRAAVEHLARRKRVLYE--------LAEGDREN 49 Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATREFAV 157 +A+++ + + V+L + + A +L R A+ Sbjct: 50 VAQELERICETE---PGDPTVFLALAALDRRRGRIERAKAVHRTVLASADLPAEQRVAAL 106 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 L + + +A +A+ ++P + E + +++ + + A L ++ Sbjct: 107 VGLGRDLLAENNERAAVGALVRAVSLAPRSVATLETLARALERAGAWERAAAAWERLEKQ 166 Query: 215 K--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + A + R + ++ E + G + A ++ L +S A+ + Sbjct: 167 VEGRRALDARVGRGHAVAGQASEALEDGVDKKARKLAERAVDLAPDSGHCWAVRARVESA 226 Query: 273 QNKKRKAEVILEKIWKVNPH------PEIANIYTHLLS-ENTVGKLKRALRLEEINKESV 325 +A ++ W+++P PE + + + ++ +LR+ Sbjct: 227 LGDPGEALESWQRAWELSPAGARSIVPEAWEWASENRRHGDLMERMLSSLRIAR------ 280 Query: 326 ESLVIVSKIALEMGSI-DQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 E L++V+ DQA A + +P ++ L+ ++ + Sbjct: 281 EPLLVVALAEKVARQHPDQAAAALDRVAERSPAAQLSLVRLRLSRGQR 328 >gi|242015374|ref|XP_002428334.1| pre-mRNA splicing factor, putative [Pediculus humanus corporis] gi|212512930|gb|EEB15596.1| pre-mRNA splicing factor, putative [Pediculus humanus corporis] Length = 935 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 106/310 (34%), Gaps = 46/310 (14%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 D+ + L M + AR Y TF +E ++L + A E + + Sbjct: 531 EDRKHAWLEDAEMCASQGAFECAR--AIYAHALSTFPSEKSIWL---RAAYFE-KAHGTR 584 Query: 141 EKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 E LE +LQ P + + G++++A+ A +P++ + A V Sbjct: 585 ESLEALLQRAVAHCPKSEVLWLMG-AKSKWLAGNVSAARSILALAFQANPNSEEIWLAAV 643 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-------------- 241 + E+ RA L + +A + +L + DK Sbjct: 644 KLESENSEYERARRLLANARASAPSPRVLMKSAKLEWALNDLDKAHKLLEEAIKMFPDYP 703 Query: 242 ---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + +K C +S+ A + +A +LEK Sbjct: 704 KLWLMKGQIEEQQNMVDKALETYNLGIKKCPSSVPIWRLLANLEERRGLLTRARSVLEKG 763 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIVSKIALEMGSIDQA 344 N P+ A ++ + + LK + + +E S ++ ++ A+ M S Q Sbjct: 764 RLRN--PKNAELWLEAIRIESRAGLKDIANNLMAKALQECPNSGILWAE-AIFMESRPQR 820 Query: 345 HAKAMLAMKI 354 K++ A+K Sbjct: 821 KTKSVDALKK 830 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 66/193 (34%), Gaps = 15/193 (7%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 W+ +A + + A + R+ S Sbjct: 534 KHAWLEDA--EMCASQGAFECARAIYAHALSTFPSEKS-----IWLRAAYFEKAHGTRES 586 Query: 246 YHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLL 303 ++ ++ C S + + AKS A IL ++ NP+ E I L Sbjct: 587 LEALLQRAVAHCPKSEVLWLMGAKSKWLAGNVSAARSILALAFQANPNSEEIWLAAVKLE 646 Query: 304 SENTV-GKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 SEN+ + +R L + V++ +K+ + +D+AH A+K+ P Sbjct: 647 SENSEYERARRL--LANARASAPSPRVLMKSAKLEWALNDLDKAHKLLEEAIKMFPDYPK 704 Query: 361 FLLL-AQIEQANS 372 L+ QIE+ + Sbjct: 705 LWLMKGQIEEQQN 717 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 72/210 (34%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 282 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPKSEDLW- 340 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++++ S+ I AA N KR + K Sbjct: 341 -------LEAARLQPPDTARAVIAQAVRHIPTSVRIWIRAADLEAETNAKR---RVYRKA 390 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E +V+ + ++++ + + A Sbjct: 391 LEHIPNSVRLWKAAVELEDPEDARILLSRA---VECCPTNVDLWLALARL----ETYENA 443 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 444 RKVLNKARENIPTDRQIWTTAAKLEEANGN 473 >gi|159129145|gb|EDP54259.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus fumigatus A1163] Length = 926 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 104/300 (34%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G+++ A+R +A + + Sbjct: 578 AADLERNHGSKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQN 636 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240 P+ + A V+ A + +A L ++ A + R L N D+ Sbjct: 637 PNNEDIWLAAVKLEADADQTDQARELLATARREAGTDRVWIKSVAFERQLGNIDEALDLV 696 Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + C S+ + A++ Sbjct: 697 NQGLQLYPKADKLWMMKGQIYEYQNKYPQAREAYSTGTRACPKSVPLWLLASRLEEKSGA 756 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E + +A L +E S ++ S+ Sbjct: 757 VVKARSVLDRARLAV--PKSAELWTESVRVERRANNIGQAKVLMAKALQEVPTSGLLWSE 814 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + +A + K+ +F+ +A+I +K + W + A+ + D Sbjct: 815 SIWHLEPRAQRKARS-LEAIKKVENDPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 872 >gi|323699303|ref|ZP_08111215.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio sp. ND132] gi|323459235|gb|EGB15100.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio desulfuricans ND132] Length = 486 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 13/159 (8%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++ I L E R D + +A+ + L L +S Sbjct: 132 NKVIEELAAAISPPMELRRQMEHC-----RSLLDAHNYVAALAASDRILSLRPDSARGLA 186 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP---HPE--IANIYTHLLSENTVGKLKRALRLEE 319 +L+ + A + NP P +A + + E + LK L Sbjct: 187 MRGDALMGTGRVDAAVQAYMAAHEANPIFMAPLAKLAEAFRDMEDERALAYLKELDTLSP 246 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +N E + +++ L G +QA +++ A R+ Sbjct: 247 LNP---ERKIDIAEQHLRQGQHEQAERYLDQSVQAAERE 282 >gi|217967766|ref|YP_002353272.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724] gi|217336865|gb|ACK42658.1| TPR repeat-containing protein [Dictyoglomus turgidum DSM 6724] Length = 870 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 13/126 (10%) Query: 140 HEKLEMMLQIPATREFAV-------YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + + +E + L E+ + D NSA Y KAL++ P++P + Sbjct: 731 RVIYKQLGKEDKLKEIKIDERVYIQRGL--EAYKNKDYNSAFDYFKKALELKPNSPEIMN 788 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + ++ + AI + + + K++ + L+ A KGD+ ++ E Sbjct: 789 NIGAVLFMSGRYDEAILWFKKALETKKDYVQAYGNLVYAY----LQKGDLFSAEVVLNEG 844 Query: 253 LKLCDN 258 LK N Sbjct: 845 LKYAPN 850 >gi|159899986|ref|YP_001546233.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893025|gb|ABX06105.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1161 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 96/321 (29%), Gaps = 58/321 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 AR+ + L + ER+++ A +L +T A Sbjct: 839 GRFEAAREQERAAIARDADGVYIEAQLGIAESFRRERRFDEAITAYNEILDNDSTIIPAY 898 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQ----------------- 196 L + G+ A Y +AL P+ W+ +A+V+ Sbjct: 899 IGLGRTAADRGEWQVAIGYYNQALAREPNSTNAHFWLGQALVEQGFYERALDEFNLVLAT 958 Query: 197 ---------------------------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + + A L++ + N A L Sbjct: 959 DPNNAEALFGAGRAYCNMAINSYAYDPAQAAEYD-AEARRLLDRAL----NYRPNDARAL 1013 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R N + M A+ D + +L + A K +SQN + AE L++ + Sbjct: 1014 FERGKLNERQNQMAAAISDYGRAAQLDAQNSEALYLQGKLYLSQNNLQAAEEALDQSVRR 1073 Query: 290 NPHPEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 N + + +Y + + +K R +N E+ A E ID A Sbjct: 1074 NQN-DPTALYWLGRTYRAQNRTNDAIKSFERALSLNGNFHEARYYQGLTAEEANQIDLAR 1132 Query: 346 AKAMLAMKIAPRKEIFLLLAQ 366 L + A + + L A+ Sbjct: 1133 EAYHLISQQASPDDRWRLQAE 1153 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 53/192 (27%), Gaps = 34/192 (17%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G SA+ +AL++ + + +++ A + + Sbjct: 700 QAGQDQSAEDIFLRALNVDSSNASAAYEIGRLRQNRGDYAGAEKAYQVATEINTSYVEAH 759 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L + + +A+Y AI++ + + + + +A LE+ Sbjct: 760 LALGQLYARYLDQPDNAVAAYQRAIDAGGEDPRNFED---MGREFLEIGRYSEAADALEQ 816 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 +N ES +++ LE G + A Sbjct: 817 S-------------------------------VRLNPNVPESRHYLAQAYLEQGRFEAAR 845 Query: 346 AKAMLAMKIAPR 357 + A+ Sbjct: 846 EQERAAIARDAD 857 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 65/218 (29%), Gaps = 19/218 (8%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E IG + A +++ ++P+ P + Q Y+ + A + Sbjct: 799 REFLEIGRYSEAADALEQSVRLNPNVPESRHYLAQAYLEQGRFEAAREQERAAIARDADG 858 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L IA S + D + E L I A I ++ + + + A Sbjct: 859 VYIEAQLGIAESFRRERRFD--EAITAYNEILDNDSTIIPAYIGLGRTAADRGEWQVAIG 916 Query: 282 ILEKIWKVNPHPEIANIYT--HLLSENTVGK-LKRALRLEEINKESVESLVIVSKI---- 334 + P+ A+ + L+ + + L + + + E+L + Sbjct: 917 YYNQALAREPNSTNAHFWLGQALVEQGFYERALDEFNLVLATDPNNAEALFGAGRAYCNM 976 Query: 335 ALE--------MGSID-QAHAKAMLAMKIAP-RKEIFL 362 A+ D +A A+ P Sbjct: 977 AINSYAYDPAQAAEYDAEARRLLDRALNYRPNDARALF 1014 >gi|114052114|ref|NP_001039840.1| pre-mRNA-processing factor 6 [Bos taurus] gi|86820928|gb|AAI05319.1| PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Bos taurus] gi|296481160|gb|DAA23275.1| PRP6 pre-mRNA processing factor 6 homolog [Bos taurus] Length = 941 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 101/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNLVAAQE 696 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L++ + + + + LK C +S + ++ Sbjct: 697 LCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S V+ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ASTLMAKALQECPNSGVLW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|300868210|ref|ZP_07112842.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506] gi|300333834|emb|CBN58026.1| hypothetical protein OSCI_3590059 [Oscillatoria sp. PCC 6506] Length = 539 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 30/255 (11%), Positives = 75/255 (29%), Gaps = 19/255 (7%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVT 191 ++ A L++ + E + G L A +A +++P++ W Sbjct: 25 SGKWEEAAAAYRRCLELNP-DFSWYHHNLGEVLAQQGKLEEAGDCYQRACELNPNSAWSW 83 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + W A+ + + ++ + +G + + + Sbjct: 84 HGLGEMLERQGNWDGAVAAYRRAVEIYPDFYE----FHNSLGKALCFQGQLEEALGCLRQ 139 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----EN 306 +++L S + + L + + L + +N P +Y L Sbjct: 140 AIELDAESALPYENLWEVLARLGQVDEGIECLRQAIALN--PGSWELYMKLAEALQGKNE 197 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 L + ++N + + G ++A A A ++ P A Sbjct: 198 LQEALAGYGKAIQLNPDFYWLRYKLGTALAATGQWEEAIASYKQAAELEPGA------AI 251 Query: 367 IEQANSHNTDKILYW 381 + H + W Sbjct: 252 VHHYLGHTLAIVQRW 266 Score = 40.3 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 78/252 (30%), Gaps = 26/252 (10%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDA 187 A Q+ A + ++ + L + + + Y K L++SP++ Sbjct: 225 ALAATGQWEEAIASYKQAAELEPGAAIVHHYLGHTLAIVQRWEEAIVSY-KKTLELSPES 283 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V + + + WS A+ + K E N + +L + D + Sbjct: 284 AVVYQHLGDALARLQRWSEAVASYRKSVK--LEPNSLEGQDHLGFALTQLQQWD--EAIG 339 Query: 248 DAIESLKLCDNSIMASICAAKSLISQN---KKRKAEVILEKIWKVNPHP-EIANIYTHLL 303 ++L+L NS + +L + +A K ++ P+ EI + Sbjct: 340 CYRKALELSPNSDVVYCHLGDALRQRGTEQDLDEAASCYHKAIELTPNNLEICQKVLEMK 399 Query: 304 SENTVGKLKRALRLEE----------------INKESVESLVIVSKIALEMGSIDQAHAK 347 + + + L I ++ E ++ + G QA Sbjct: 400 PIDHEAQFQLGQALAAQGQWQQAIEAYVLYIDIKPDNYEVHHLLGEALAARGQWQQAIEA 459 Query: 348 AMLAMKIAPRKE 359 A+ + P Sbjct: 460 YRRAVDLDPNSS 471 >gi|302903061|ref|XP_003048776.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729710|gb|EEU43063.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 821 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 105/312 (33%), Gaps = 24/312 (7%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GY +L A + + +S N V + + Y A + Sbjct: 500 GYYSLSQ---------FQCAESVQALMSLPLAHQNTPWVLAQMGRAHYEQASYADAEKFF 550 Query: 144 EMMLQIPATRE--FAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 M +R VYS + + R DL+ A + +D + +P A+ + L Sbjct: 551 RKMRVQAPSRLEDMEVYSTILWHLKRETDLS---FLAHELVDSAWLSPQAWCALGNAWSL 607 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A+++ +A+ + + ++ A + E+ + + +++ Sbjct: 608 ARDYEQALKCFKRATQLDPKF----AYAFTLQGHEHVANEEYDKALTAYRQAISADRRHY 663 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRL 317 A K KA +NP+ + + E L+ + Sbjct: 664 NAYYGIGKVQERLGALDKAYAHFHAAQMINPNNAVLICCIGTVLEKQKQIMPALQAYSKA 723 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTD 376 E+ + ++ ++ L +G +D A + M+ +AP + LL ++ ++ Sbjct: 724 VELAPRAAQTRYKKARALLAVGQLDAAQKELMVLKDLAPDEATVHFLLGKLYRSMGEKQL 783 Query: 377 KILYWT-QSALH 387 + ++T AL Sbjct: 784 SVRHFTIALALD 795 >gi|303249434|ref|ZP_07335654.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ] gi|302489159|gb|EFL49131.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ] Length = 209 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 6/168 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 +A+ + A + ++ + L + GDL+ + KA P Sbjct: 35 AYVAKGRLIEAEAEFHQAVECSPSLAEGFVQLGGLAMNKGDLDGCLEWNEKACQARPLFA 94 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ E +A L + K ++ + A L A KGD+ + + Sbjct: 95 VPYGNTGFVHLQRGEVDKAEKALRRAIKIDPKYVQAMATLGSA----LFMKGDLEGAEYH 150 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV--NPHPE 294 + ++L++ A A + + + KA+ ++E+ K PHP+ Sbjct: 151 STKALEIEPMFGPAINNLALVAMERGEFAKAKELVERARKTGYEPHPD 198 >gi|218510672|ref|ZP_03508550.1| hypothetical protein RetlB5_26548 [Rhizobium etli Brasil 5] Length = 460 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 66/228 (28%), Gaps = 37/228 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149 G++ AA + A+ Y+ + + + + A + Sbjct: 232 GVILKAAGDRTAAQ--ARYLDAIRLWPQYPEAHYNFAILLEETGHPDEAAAHYRQALKCR 289 Query: 150 PA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQ----QYVL 200 P + L+ E GD A + +AL + P ++ Sbjct: 290 PDHVDALLRLAGLFDE---WGDQFEAHHHFREALRLRPGFAEAHNNFGVFLEKNGDAQAA 346 Query: 201 AKEWSRAIT--------------FLNQKKKNAKEWNRNRAILLIARSLE--------NAD 238 + +A+ L + A E + A+ + E + Sbjct: 347 ESHYRQALQLRPDYAEAHYNYAMLLEGRDVEAAELHYRAALSSLPMYAEAHNNLGVLLHE 406 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 KG +I + + +++L + A L + ++ +A+ K Sbjct: 407 KGALIEARSHYLTAIRLRPDDPQIYRNLALLLAAMGEEEQADRYARKA 454 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 56/184 (30%), Gaps = 12/184 (6%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 KAL++ D P + A + T + +A ++ Sbjct: 215 EKALELRADYPEAHNNLGVILKAAGD----RTAAQARYLDAIRLWPQYPEAHYNFAILLE 270 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292 + G + ++LK + + A + A + +A + ++ P H Sbjct: 271 ETGHPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHHFREALRLRPGFAEAH 330 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++ + + L ++ + E+ + + LE ++ A A+ Sbjct: 331 NNFG-VFLEKNGDAQAAESHYRQAL-QLRPDYAEAHYNYAML-LEGRDVEAAELHYRAAL 387 Query: 353 KIAP 356 P Sbjct: 388 SSLP 391 >gi|254179720|ref|ZP_04886319.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] gi|184210260|gb|EDU07303.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] Length = 1454 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 777 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAAQAYLDR 829 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 830 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 889 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 890 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 949 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 950 LERRDDAIAA--LQRALE 965 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 80/209 (38%), Gaps = 17/209 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + A +A+ ++PD + + ++ A++ + ++ + + Sbjct: 880 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 939 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ A + + D IA+ A+E A + + + KA + + Sbjct: 940 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 995 Query: 285 KIWKVNPHPEIANI-------YTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + V H E+A+ Y +L + + L+RA EI + E+L + + Sbjct: 996 R--YVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRA---LEIEPHNAEALFALGTVLE 1050 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ A+ I + + LA Sbjct: 1051 RVDRLAESEEVLRRALTIRRDYRVLVNLA 1079 >gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro] gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro] Length = 1979 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 92/262 (35%), Gaps = 43/262 (16%) Query: 133 ERQYNIAHEKLEMMLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--P 188 E +Y A + + ML+ P + + G + A ++L+ P+ Sbjct: 392 EGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKL--GRIEEALDSLAQSLEKEPENYGL 449 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIAR---SLENADK- 239 W+ + ++ + ++ A+ L + + + N+ A+ + R +LE+ ++ Sbjct: 450 WLQQGLI--LLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEG 507 Query: 240 ---------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 G + +++ L + A L++ + K Sbjct: 508 LRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEK 567 Query: 279 AEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 A +++ K NP ++ +IY L T L+ ++ +N + + L ++ Sbjct: 568 ASEAFDEVLKTNPE-DLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVA 626 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 ++G ++A P Sbjct: 627 QAKLGKQEEALETFEKLAAKNP 648 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 13/196 (6%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRA 226 A + L ++P A+ + ++ +NR Sbjct: 497 YEEALEDFEEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRG 556 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++L+A D + E LK + + +L+ K A EKI Sbjct: 557 LILLA-------VDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKI 609 Query: 287 WKVNP-HPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +NP +P++ + L+ +L N E ++ K A+E+G D Sbjct: 610 LSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDT 669 Query: 344 AHAKAMLAMKIAPRKE 359 A + P Sbjct: 670 ALQAFDQVLSEKPESR 685 Score = 43.4 bits (101), Expect = 0.079, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 83/261 (31%), Gaps = 43/261 (16%) Query: 135 QYNIAHEKLEMMLQ-IPATREFAVY-SL-YFESCRIGDLNSAQRYATKALDISPD----- 186 +Y A + +L+ P +E + L + R+ D A + +A+ + P Sbjct: 258 RYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLND---AIKAFEEAIKLDPTYFEAW 314 Query: 187 ---------------APWVTEAVVQQYVLAKE-W-SRAITFL------NQKKKNAKEWNR 223 A ++V++ Y KE W +RA+ + K ++ Sbjct: 315 NYKCLALMKLEVYEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSFSRTAEL 374 Query: 224 NRAI--LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A L + A +G + L+ I A LI + +A Sbjct: 375 DPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALD 434 Query: 282 ILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L + + PE + L + LK ++ E+ ++ + Sbjct: 435 SLAQSLEKE--PENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALY 492 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 M ++A +++ P Sbjct: 493 SMDRYEEALEDFEEGLRLNPY 513 >gi|312212753|emb|CBX92836.1| similar to N-alpha-acetyltransferase 15 [Leptosphaeria maculans] Length = 836 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 57/162 (35%), Gaps = 12/162 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y A + + L+I + L C+I D K + P A Sbjct: 91 KNYEEAIKAYKFALRIEPNSLNILRDLALLQCQIRDYEGYIESRRKMMQERPQLRQNWTA 150 Query: 194 VVQQYVLAKEWSRAITFLN------QKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + Y LA ++ A LN ++ + + A L ++ A+ GD+ + Sbjct: 151 LAVAYHLAGNYAEAENILNTYEGTLKQTPPKSDLEHSEATL--YKNTVIAESGDVERALK 208 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 E L+ + A A L+ +K +A EK ++ Sbjct: 209 HLEEVLRHSLDRTSALELRATYLLQLGRKEEA----EKAYRT 246 >gi|302338865|ref|YP_003804071.1| hypothetical protein Spirs_2362 [Spirochaeta smaragdinae DSM 11293] gi|301636050|gb|ADK81477.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM 11293] Length = 647 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 96/297 (32%), Gaps = 48/297 (16%) Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 + Y + L GL+ I + A+ + + + AE+ Sbjct: 65 YFKEGEYQRALDLL-DGLL-IENGDDQDAKDLRDQIIAERK---------------QAEK 107 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-----DAPW 189 + A + + L+ + +S + + ++A++ + L+ Sbjct: 108 KAADAERQSQEALKDTLSDL-------GQSLKSSETSAAEQERDRQLEAKRQEELRKLED 160 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 +A ++ + A+ ++K + L+ + E D+ D I + Sbjct: 161 QRKAAEERQRQEADRLAALDKAEREKAEKLK-------NLVRQGEEAMDQKDYIGARGFF 213 Query: 250 IESLKLCDNSIMASICAAKSLISQN-----KKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 E+L + +S A ++ ++ +KA + + + P + Y L Sbjct: 214 SEALDIDPSSAPALANTGETFFREDENSDSNIKKAVDYANRAIQSD--PNLWVPYNTLGK 271 Query: 305 ENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + +N E+ + L + K G D A A+ I P Sbjct: 272 VYSKQRQWNNAIDSYKQAARLNPENADLLFELGKAQYRAGKYDDARQSFEAAIHIDP 328 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 85/297 (28%), Gaps = 41/297 (13%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A AR+ H + + L Q L N A QI + A Sbjct: 310 AGKYDDARQSFEAAIHIDPQHEKAYLNLGVTQRRL--GNVNAAINAFGKAAQINKESDVA 367 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD-------APWVTEAVVQQYVLAKEWSRAI- 208 Y L + GD+ A KA + PD A+ + + RAI Sbjct: 368 FYQLGELYKQKGDMKQASENYQKAAALQPDRNIYQGSYAVALTALGKYQEAEAAYKRAIA 427 Query: 209 -----------------------TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 K A + + + A+ L L + G+ + Sbjct: 428 ADSEDPVARYNIALVQLQLGKDNDAFENAAK-AVQLDSSSAVYLYTLGLTSEAVGNSDGA 486 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300 S+ + I K Q K +A L + ++P + + N+Y Sbjct: 487 VSAYRASIAKDRGYLPPKINLGKLYDDQGKYDEALDQLLAAYAIDPKSLEVNNNLGNVYL 546 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 H E +K E + +S +E G D A A +K+ P Sbjct: 547 H--KELYQDSIKHYKAAIEKKPNATLMRYNLSLAYIETGDQDDAIASLQELIKVDPS 601 >gi|196232460|ref|ZP_03131313.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196223532|gb|EDY18049.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 792 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 13/204 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + + + G L A+ + L + P + AI F+ Q Sbjct: 9 IALQHHQAGRLVEAESLYRQILAVQPGHAETLHLLGALAQQVGRTEMAIEFMRQAIAADP 68 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N A L + G + A ++++ A L + +A Sbjct: 69 ----NHAAALSNLAATLLAGGRAGEAAEYARRAVEVAPGFADAHYNLGAVLAELGQMEEA 124 Query: 280 EVILEKIWKVNPHPEIAN-----IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSK 333 + ++ P +A I L + + +RA++L ++ + Sbjct: 125 LASYRRALEIQPTHAVAENNLGNILRELRRLDEAIAAYRRAIQL---QPAYADAHNNLGV 181 Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357 E G D+A A A+++ P Sbjct: 182 ALSEQGKSDEAIAAYGRALELKPD 205 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 40/319 (12%), Positives = 98/319 (30%), Gaps = 41/319 (12%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A ++ + H E L +LL +A + +A E + + A Sbjct: 16 AGRLVEAESLYRQILAVQPGHAETL-HLLGA-LAQQVGRTEMAIEFMRQAIAADPNHAAA 73 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +L G A YA +A++++P + + A+ + + Sbjct: 74 LSNLAATLLAGGRAGEAAEYARRAVEVAPGFADAHYNLGAVLAELGQMEEALASYRRALE 133 Query: 217 NAK--------------EWNRNRAILLIAR----------------SLENADKGDMIASY 246 E R + R + +++G + Sbjct: 134 IQPTHAVAENNLGNILRELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAI 193 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTH 301 +L+L + +L + + +A V + + +P + Sbjct: 194 AAYGRALELKPDGNAVHANLGNALRASGRYAEAVVAYRRSLQSSPARLDICQGLGEALVL 253 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--E 359 L + G++ + N + E+ ++ + +D A A A+++ P + Sbjct: 254 LGRFDEAGEV--FRLIVRCNPDDPEAWASLANVLQRGEKLDDAIACYRQALRLDPEEPFR 311 Query: 360 IFLLLAQIEQANSHNTDKI 378 + L A +++ + Sbjct: 312 LCRLAALLQRQRRLDDAAA 330 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 71/260 (27%), Gaps = 11/260 (4%) Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R + Y + L + + +Y + Sbjct: 148 ILRELRRLDEAIAAYRRAIQLQPAYADAHNNLGVALSEQGKSDEAIAAYGRALELKPDGN 207 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 V+ A +Y A LQ R L +G + A Sbjct: 208 AVHANLGNALRASGRYAEAVVAYRRSLQSSPARLDICQGLGEALVLLGRFDEAGEVFRLI 267 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + +PD P ++ ++ AI Q + E L + + Sbjct: 268 VRCNPDDPEAWASLANVLQRGEKLDDAIACYRQALRLDPEEPFR----LCRLAALLQRQR 323 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEI 295 + + ++ L+L N A A+ Q + A ++ ++ + P H ++ Sbjct: 324 RLDDAAAALLQVLELQPNQTEALYRLAEIYKDQGRSELALELMRRLHGLAPEVPRIHSDL 383 Query: 296 ANIYTHLLSENTVGKLKRAL 315 + L S + RA Sbjct: 384 ILMM--LASPEVDERAVRAE 401 >gi|167719468|ref|ZP_02402704.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei DM98] Length = 965 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 288 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 340 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 341 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 400 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 401 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 460 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 461 LERRDDAIAA--LQRALE 476 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 12/192 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATRE 154 H+ LA + Q ++ LL ++AL ++ A + E + + Sbjct: 394 HDAALALQCARRAVQ--LAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESY 451 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + R D +A + +AL+++ P VQ Y+ +++ +A+ + Sbjct: 452 ANLIPALAALERRDDAIAALQ---RALELNSKHPGALNNGVQFYLRTQQYDKAMEL--AQ 506 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + N D + +L++ ++ A L + Sbjct: 507 RYVGAHGELASAHTMCGLVYHNLKAYDRAEA--SLRRALEIEPHNAEALFALGTVLERVD 564 Query: 275 KKRKAEVILEKI 286 + ++E +L + Sbjct: 565 RLAESEEVLRRA 576 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 20/229 (8%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A+ Y +A+ + PD ++ A + + A + + + L Sbjct: 331 PDAARAYLDRAIRLRPDYA----VAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLN 386 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +AR D + A +++L + A + A+ + +A E+ Sbjct: 387 LAR---IRRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFER--LR 441 Query: 290 NPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P+ Y +L ++ + L+RAL L + ++ + V + L Sbjct: 442 EQRPDAPESYANLIPALAALERRDDAIAALQRALELNSKHPGALNNGV---QFYLRTQQY 498 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 D+A A + + + N D+ + AL P Sbjct: 499 DKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAEASLRRALEIEP 547 >gi|78045755|ref|YP_361930.1| putative porphyrin biosynthesis protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034185|emb|CAJ21830.1| putative porphyrin biosynthesis protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 421 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 107/361 (29%), Gaps = 31/361 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G Y + L IL L LL+ Sbjct: 7 VLILLIAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K +KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYFE----SCRIGDLNS 172 L V++A A A + + + T L + + D + Sbjct: 120 ALAS--AVRVADARGDEAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINALDSAN 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ + L + A A L ++ A + L Sbjct: 178 AQPLPARGLLLRTRA----------LAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATL 227 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291 + + + + + E+L + A + A A+ + A LE+ Sbjct: 228 AEQTLLQASDANALAERWEALPKTLRTTPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQW 287 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +Y L E + A R +S L+ ++++A QA A Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347 Query: 352 M 352 + Sbjct: 348 I 348 >gi|332140114|ref|YP_004425852.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550136|gb|AEA96854.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 924 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A E E +L + +L + + DL A+ A KA+ + + Sbjct: 787 QIRNDRDSAIETYEQVLTQTPDNFVVLNNLAYLAFEDNDLARAETLAKKAVSLQRENADA 846 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN---ADKGDMIASYH 247 + + Q ++ E A+ L ++ N + +A LE A +AS Sbjct: 847 VDTLAQIHIAKGEKEAALA-LYEQISAGPIANDEVYLNHVALLLELDKDALAKRRLASRE 905 Query: 248 DAIESLK 254 E+ K Sbjct: 906 FTTEAAK 912 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 60/159 (37%), Gaps = 7/159 (4%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A++ +P++ +++ Y+ + +A K+ E + A LI Sbjct: 429 EEAVEKAPESVTSQATLLRAYIATNQLDKA----KTAAKDWHEQSPETAAPLIYLGNIAT 484 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEI 295 +G + ++ +L D + AK L+++ KK A + NP + Sbjct: 485 AEGAYQDAAQYLDKASELSDAGNEVTYSRAKLLVAEGKKDNAMAFIRAFVDKNPADVQAL 544 Query: 296 ANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A + + N + A NK+ + +++++ Sbjct: 545 ALWFALAVEKGNGDEVIAHAQTQFNGNKDQLNLRLLLAR 583 >gi|307354733|ref|YP_003895784.1| tetratricopeptide repeat-containing protein [Methanoplanus petrolearius DSM 11571] gi|307157966|gb|ADN37346.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius DSM 11571] Length = 1070 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 80/272 (29%), Gaps = 36/272 (13%) Query: 106 MHSYVSQQHTFHNEYLV---YLLEVQIA----LAERQYNIAHEKLEM-MLQIPATR---- 153 + Y + +L Q Y A + + + P+ + Sbjct: 61 LSKYQDAERYLKRAVAASPENILAWQALGNSLYESGDYQGALQCFDAILKADPSIKDILN 120 Query: 154 ----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAI 208 + Y ++ + + L+I P + E + +W RA+ Sbjct: 121 KKVDLLELQGNYEQA-----AETCLKL----LEIEPANIRIKE-RFGILCMRGSDWGRAL 170 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + +A + N + LE G + +LK + I A A Sbjct: 171 EAFS-GVISADQANTRSMV-YTGEILEII--GKNEEALEIYETALKHDPSCIPALYNRAY 226 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKES 324 L + +A +I NP+ ++ + + + + + Sbjct: 227 LLEKVGRYSEAAEAFREINTNNPN-DLIAAFRRATDLFWTGAYGECAHTIEMILKKTPDD 285 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +++ ++ +G ++A A +K AP Sbjct: 286 IKAWQMMGVALELLGEYERAVACYDNVLKAAP 317 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 86/294 (29%), Gaps = 49/294 (16%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +I + + + + H + + L+ ++ A E ++ Sbjct: 600 ANIGDIEGSAREYEEIIGAH--PEQSGLALILGHELEILGRHEEAAAAFEHFVRANREDA 657 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLA-KEWSRAITFL 211 +IG+ A + KA P +A++ + K+ + L Sbjct: 658 GGWREFGRSLGKIGEYVKAAKSFEKAAAFRPEDKGILFDQAMLLLEIGEYKQSADIFDAL 717 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 R RA L +A K + A ES Sbjct: 718 RGNDPENPAVRRGRAFALAGAKKYSAAKEAFEEYFEKAKES------------------- 758 Query: 272 SQNKKRKA-EVILEKIWKVNPHPEIANI-YTHLLSENTVG-----KLKRALRLEEINKES 324 S N+ RKA + EK ++A Y +L EN +L LR ++ Sbjct: 759 SDNEARKALAEVCEKTGDF----DLAAGNYAAVLEENKEDIDTWLRLTNLLRYMSRYEDV 814 Query: 325 VESLVIVSKIA--------------LEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +E+ +++ +G +QA +++ + ++ Sbjct: 815 IEATDNIAEFEPENIPALKIRGDVLYRLGRYEQASETFQKVLELDDSNRLCRMM 868 >gi|226486964|emb|CAX75347.1| O-glycosyltransferase [Schistosoma japonicum] Length = 1045 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ N +V+ + + ++A + + +++ A +L Sbjct: 235 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 294 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G ++ A+ Y AL + P + + AI + + E+ Sbjct: 295 LKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 352 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + +G + + E++++ A +L + A Sbjct: 353 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 410 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 ++ ++NP H +A+I S N + ++ ++ ++ Sbjct: 411 QRAIQINPAFADAHSNLASILKD--SGNLSEAITSYKTALKLKPNFPDAFCNLA 462 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 11/206 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + + A E L++ T ++ +L G A R +AL+I P+ Sbjct: 292 ANALKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPE 351 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + L + A+ + + + + A + D+ + Sbjct: 352 FAVAHSNLASMLQLQGKLQEALLHYREAIRISPTF----ADAYSNMGNTLKELQDVQGAM 407 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301 ++++ A A L +A + K+ P+ P+ +A+ Sbjct: 408 QCYQRAIQINPAFADAHSNLASILKDSGNLSEAITSYKTALKLKPNFPDAFCNLAH-CLQ 466 Query: 302 LLSENTVGKLKRALRLEEINKESVES 327 ++ + + R +L + ++ +ES Sbjct: 467 IVCDWS-DYKHRMKKLVSMVQDQLES 491 >gi|119897287|ref|YP_932500.1| HemY protein [Azoarcus sp. BH72] gi|119669700|emb|CAL93613.1| HemY protein [Azoarcus sp. BH72] Length = 399 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 53/384 (13%), Positives = 117/384 (30%), Gaps = 52/384 (13%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGN-RLYRTSPFVILSILYFFLFAWILLFA 60 +R + + I +++ + + + S +++ +L A L+ Sbjct: 1 MRALFWLIGIFATAVGLAMLARLNDGYVLVVLPPWRVQLSLNLLVVLLLLGFAAGYLVLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ-------- 112 + L PA + +R +K +AL L ++ A K S Sbjct: 61 LVGRTLELPARVSSWRERRRREKAGRALREALRALFEGRFAQAVKHASGAFASGESPAMA 120 Query: 113 -------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 H ++ + A A E L + R Sbjct: 121 ALVAARAAHAMRDDTRYRIWIGHAADQGEDARAARLMTEAELAVEGRRF----------- 169 Query: 166 RIGDLNSAQRYATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +A+R + L +S ++ ++W + Q K+ + Sbjct: 170 ----EEAAERL--EMLRLSGHRHIAALRLSLRVASALQQWDEVLRLTRQLYKHKALSDEQ 223 Query: 225 RAILL-IARSLENADKGDMIASYHDA--------IESLKLCDNSIMASICAAKSLISQNK 275 A LL A + + G A+ D + + + ++ A + +++ Sbjct: 224 AAPLLRRAHAERLKELGGDAAALADYWNGIPADELRDRRFVERAVPMLSAAGRGALAR-- 281 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSK 333 R E +L++ W +A +Y H + V L R + + L + + Sbjct: 282 -RTLERLLDEEWDSG----LARLYAHCGDGEGDAVACLARGEAWLKKHPRDAGLLFALGR 336 Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357 + L +A + ++ +AP Sbjct: 337 LCLAAQLWGKAQSYLEASLNLAPT 360 >gi|291566886|dbj|BAI89158.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 294 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 16/176 (9%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+S + + ++Q H +L Q A + +L+ Sbjct: 89 LISQGQGQVRDVVEPLQRLAQLH--PETPEYGILLAQAQEYTGDPEAAAQSYRRILEQRP 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLA 201 A+ L +A L +P + Y Sbjct: 147 GEVQALQGLVSLLISQDRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQ 206 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + AI ++ KN++ R ++A+++ +G+ + E++ L Sbjct: 207 QRYQEAIAVYDEAIKNSESDFRP----VLAKAIILRQQGNPDDAELLFAEAIDLAP 258 >gi|226486968|emb|CAX75349.1| O-glycosyltransferase [Schistosoma japonicum] Length = 1045 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ N +V+ + + ++A + + +++ A +L Sbjct: 235 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 294 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G ++ A+ Y AL + P + + AI + + E+ Sbjct: 295 LKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 352 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + +G + + E++++ A +L + A Sbjct: 353 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 410 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 ++ ++NP H +A+I S N + ++ ++ ++ Sbjct: 411 QRAIQINPAFADAHSNLASILKD--SGNLSEAITSYKTALKLKPNFPDAFCNLA 462 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 11/206 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + + A E L++ T ++ +L G A R +AL+I P+ Sbjct: 292 ANALKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPE 351 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + L + A+ + + + + A + D+ + Sbjct: 352 FAVAHSNLASMLQLQGKLQEALLHYREAIRISPTF----ADAYSNMGNTLKELQDVQGAM 407 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301 ++++ A A L +A + K+ P+ P+ +A+ Sbjct: 408 QCYQRAIQINPAFADAHSNLASILKDSGNLSEAITSYKTALKLKPNFPDAFCNLAH-CLQ 466 Query: 302 LLSENTVGKLKRALRLEEINKESVES 327 ++ + + R +L + ++ +ES Sbjct: 467 IVCDWS-DYKHRMKKLVSMVQDQLES 491 >gi|148262768|ref|YP_001229474.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146396268|gb|ABQ24901.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 632 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 4/178 (2%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + L++ ++ + + Y A + ++ A L + A Sbjct: 400 KLRKDNPLIHFKLAKVYVNSKDYPAAISEYLETTKLDPDNIEAHRDLAALFRKKNQNEEA 459 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 ++ L + D A+ YV K + I L K E N Sbjct: 460 EKEYRSILRMKKDDVEARTALTSIYVKNKNYDELINLL----KEGVELNPKDPNSHYKLG 515 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 L K D A+ ES+ L + A ++ + + +A+ LE K +P Sbjct: 516 LIYEFKKDYDAAISQYKESVALKSDHAKALNAMGRAYMKSGRISEAKEALETAKKADP 573 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 98/306 (32%), Gaps = 44/306 (14%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL ++ + + + Q ++ L + + + + ++ IP Sbjct: 204 GLAALFSSRNQFDKAIGELKKAQVIDPGNKNIHRLLAEAYDKKGDKKSSEYEY-ILAGIP 262 Query: 151 -ATREFAVYSLYF---ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 T E A + E + + A AL P+ P + + + A Sbjct: 263 VKTEEVAQSNHLRQGDEFVKNKEYEKAATEYKAALKDKPEWPEALQKLGDAQMAAGHDDE 322 Query: 207 AITFLNQKKKNAKE-----------WNRN----RAILLIARSLEN-ADKGDMI------- 243 AI + + E + R A++ ++L AD GD Sbjct: 323 AIASYREAIRLKAENGNLHYNLGILYERKALLDEAVVEYRQALNYTADNGDTRRRLADIY 382 Query: 244 -------ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNP---- 291 + E +KL ++ + AK ++ A LE K++P Sbjct: 383 TLRGSFPQAIEQYRELIKLRKDNPLIHFKLAKVYVNSKDYPAAISEYLETT-KLDPDNIE 441 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 H ++A ++ K + + K+ VE+ ++ I ++ + D+ Sbjct: 442 AHRDLAALFRKKNQNEEAE--KEYRSILRMKKDDVEARTALTSIYVKNKNYDELINLLKE 499 Query: 351 AMKIAP 356 +++ P Sbjct: 500 GVELNP 505 >gi|75909502|ref|YP_323798.1| hypothetical protein Ava_3295 [Anabaena variabilis ATCC 29413] gi|75703227|gb|ABA22903.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 311 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 58/198 (29%), Gaps = 18/198 (9%) Query: 88 LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 L GL +I A + A + + + L L Q + A Sbjct: 49 LNQGLQAIQAGRIQDAIAAFQSAIQLDPNLAAAHYNLGLALR-QTGQLQ---PAADAFYR 104 Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 P + E +L A Y +AL++ P + + + Sbjct: 105 ATQSDPNFALAFANLGGSLLE---GNNLQQANDYLQRALELEPRLGFAHYNLGLVRQQQQ 161 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 W AI + + +K L L L D+ + + +++K+ Sbjct: 162 NWEGAIASFQKAVELSKNAPEPHYYLGLCYLQLGKLDE-----AKNAFNQAIKINPRYSE 216 Query: 262 ASICAAKSLISQNKKRKA 279 A L +Q ++A Sbjct: 217 AHYNLGVILFNQGNSQEA 234 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 22/171 (12%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS---------------LENADKGDMIASYHDAIE 251 A T LNQ + + AI + L G + + Sbjct: 45 APTLLNQGLQAIQAGRIQDAIAAFQSAIQLDPNLAAAHYNLGLALRQTGQLQPAADAFYR 104 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 + + N +A SL+ N ++A L++ ++ P H + + +N Sbjct: 105 ATQSDPNFALAFANLGGSLLEGNNLQQANDYLQRALELEPRLGFAHYNLGLV--RQQQQN 162 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 G + + E++K + E + L++G +D+A A+KI PR Sbjct: 163 WEGAIASFQKAVELSKNAPEPHYYLGLCYLQLGKLDEAKNAFNQAIKINPR 213 >gi|253998598|ref|YP_003050661.1| hypothetical protein Msip34_0886 [Methylovorus sp. SIP3-4] gi|253985277|gb|ACT50134.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4] Length = 463 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 17/170 (10%) Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W +A+ Y+ + W A L Q + ++ A L +G A+ Sbjct: 19 AWFAQAL--AYMRIQHWQEAEQALRQALEIDPDY----AEALCNLGYVLEQRGYPDAAEE 72 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYT 300 S+ L + + A++ L SQ++ + E I ++ + HP+ + +YT Sbjct: 73 AYRRSMALAPSLLNAALNLGVMLQSQSRFDEVEAIYQQT--IRQHPDQPAPWTNLGILYT 130 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + ++ + R L +N + ++ +S + L G ++ A Sbjct: 131 AMQRDHEAERCHR-QALM-LNPDYRKARFNLSYLLLRQGRFEEGWACIEA 178 >gi|283785422|ref|YP_003365287.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168] gi|282948876|emb|CBG88478.1| tetratricopeptide repeat protein [Citrobacter rodentium ICC168] Length = 389 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 57/282 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL VQ +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 R+G + ++Q Y +W +AI + Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSDWQKAIEVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K KE R A +L+ D+ + + NS SI + ++ Sbjct: 167 LVKLGKEKQRVEIAHFYCELALQQMAGDDLDRAMTLLKKGAAADKNSARVSIMMGRVWMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKE 323 + KA L+++ ++ E+ + + +E V L+RA E N Sbjct: 227 KGDYAKAVESLQRV--ISQDKELVSETLEMLQTCYQQLGKNEEWVEFLRRA---VEENTG 281 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 + + ++++ I D A ++ P +F L+ Sbjct: 282 AA-AELMLADILEAREGHDTAQVYITRQLQRHPTMRVFHKLM 322 >gi|302878377|ref|YP_003846941.1| tetratricopeptide TPR_2 repeat protein [Gallionella capsiferriformans ES-2] gi|302581166|gb|ADL55177.1| tetratricopeptide TPR_2 repeat protein [Gallionella capsiferriformans ES-2] Length = 391 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 38/188 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNE--YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A +MH + + ++ Q L + A + + Sbjct: 84 GEVDRALRMHHNLVDRADLDDDKRQQAVFELAQDYLKAGILDRAERLFGELKKT------ 137 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-K 214 YA AL+ +++ + +W +AIT Q Sbjct: 138 -------------------SYAKPALE----------FLLELFQKEHDWLKAITAAQQLS 168 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + +++ A + + G++ A+ +L++C S+ A+I + ++ Sbjct: 169 VVSGTSYSKLSAFFYCELANDEITAGNLTAARDHLRLALEVCPVSVRATIMLGDMVSAEG 228 Query: 275 KKRKAEVI 282 +A I Sbjct: 229 HVEQAIAI 236 >gi|113476025|ref|YP_722086.1| hypothetical protein Tery_2395 [Trichodesmium erythraeum IMS101] gi|110167073|gb|ABG51613.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 300 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 49/146 (33%), Gaps = 16/146 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +L Q A + +L I A+ L +A L Sbjct: 127 NVLLAQAKAYTGDREGAAQIYRSLLAIKPGDIKALQGLVSLLLEQERPEAAIGLLQDTLK 186 Query: 183 ISP--DAPWV--------TEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIA 231 +P + + Q Y K + AI ++ K ++K++ ++A Sbjct: 187 AAPVKNQVEAGSIDIVSVQLILGQVYAQQKRYEEAIAVYDEAIKLSSKDFRP-----ILA 241 Query: 232 RSLENADKGDMIASYHDAIESLKLCD 257 +++ ++G+ AS +++++ Sbjct: 242 KAIILQEQGNTEASQELFNKAIEIAP 267 >gi|320334271|ref|YP_004170982.1| tetratricopeptide repeat-containing protein [Deinococcus maricopensis DSM 21211] gi|319755560|gb|ADV67317.1| Tetratricopeptide TPR_1 repeat-containing protein [Deinococcus maricopensis DSM 21211] Length = 496 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 93/326 (28%), Gaps = 50/326 (15%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIP------------------------------- 150 L Q AL E +Y A E ++ Sbjct: 41 ADLSAAQRALQEGRYRDAQTAFEALIARDYNNAEAHFGLGLTLYALGDLTGARFEFTQLT 100 Query: 151 ---ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLA 201 R Y+L + R G + A KAL ++ V +A+ + Sbjct: 101 ALAPDRFEGFYNLGVLAARQGQYDEALANYQKALTLAQGKASPTSVRQVLDALAGEQTRR 160 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 ++ IT L A N A L + + G+ + L+ + Sbjct: 161 GDYPGLITTLTATLALAP----NDAALQLRLADAQYRAGNGTQALPALYALLQANPANAD 216 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHP------EIANIYTHLLSENTVGKLKRAL 315 A+ A +QN +A L+K P+ + T + Sbjct: 217 AAQLLADVYTAQNLPDRAIRELDKAVAATPNGTVQARLLLRKADLLARQNRTRDAVLAVQ 276 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + + + + + ++ L A A ++ P+ + + + N Sbjct: 277 DAVKADSRNAAAQARLGELLLARNDRTGARTAYQNAARLDPQNASYRASLALVELNLAQY 336 Query: 376 DKILYWTQSALHAMPDPLWISDDGYL 401 D Q A+ A PD L ++ ++ Sbjct: 337 DAARRDAQLAVQAAPDQLTLARAQFV 362 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 89/314 (28%), Gaps = 46/314 (14%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ A+ + + + E L A A + + Sbjct: 43 LSAAQRALQEGRYRDAQTAFEALIARDYNNAEAHFGL--GLTLYALGDLTGARFEFTQLT 100 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLA 201 + R Y+L + R G + A KAL ++ V +A+ + Sbjct: 101 ALAPDRFEGFYNLGVLAARQGQYDEALANYQKALTLAQGKASPTSVRQVLDALAGEQTRR 160 Query: 202 KEWSR------------------AITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-- 241 ++ + + + + A+ + ++ Sbjct: 161 GDYPGLITTLTATLALAPNDAALQLRLADAQYRAGNGTQALPALYALLQANPANADAAQL 220 Query: 242 ----------MIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKIWK 288 + + +++ N + + A L QN+ R A + ++ K Sbjct: 221 LADVYTAQNLPDRAIRELDKAVAATPNGTVQARLLLRKADLLARQNRTRDAVLAVQDAVK 280 Query: 289 VNPHPEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + A ++ T + ++ ++ ++ + L + D A Sbjct: 281 ADSRNAAAQARLGELLLARNDRTGARTA-YQNAARLDPQNASYRASLALVELNLAQYDAA 339 Query: 345 HAKAMLAMKIAPRK 358 A LA++ AP + Sbjct: 340 RRDAQLAVQAAPDQ 353 >gi|320013204|gb|ADW08052.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces flavogriseus ATCC 33331] Length = 1261 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 90/306 (29%), Gaps = 31/306 (10%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY-----LVYLLE-------- 126 D+ +AL +I AHN A + NE L LE Sbjct: 554 RSDQDEEALTEFDRAI-AHNARNALAWARRGEEHRLLGNEDQAVADLTAALELEPTNAWA 612 Query: 127 ----VQIALAERQYNIAHEKLEMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRYATKA 180 + + A L L++ T + G + A T A Sbjct: 613 LGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARG--DTHRQAGRYDEAVTDYTAA 670 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ P W A + + A + A+T + + A L AR + G Sbjct: 671 LELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTY----ATALGARGQAHQQAG 726 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + D +L+L A + + +A L +++P A + Sbjct: 727 RHEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYA-AALGA 785 Query: 301 HLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + G+ + E++ +L + + G D+A +++ P Sbjct: 786 RGDTHRQAGRYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDP 845 Query: 357 RKEIFL 362 L Sbjct: 846 TYAAAL 851 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 19/234 (8%) Query: 133 ERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 +Y+ A L++ T + G + A T AL++ P W Sbjct: 861 ASRYDEAVTDYTAALELDPTYATALGSRG--DAHRQAGRYDEAVTDLTAALELDPTNAWA 918 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + Q + A + A+T L E + L AR + G + D Sbjct: 919 IGSRGQAHQQAGRYDEAVTDLTAAL----ELDPTLTWALGARGETHQQAGRYEQAVADYT 974 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 +L+L + A ++ + +A L +++P + T + Sbjct: 975 AALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPT----LTWALGARGETHQQ 1030 Query: 311 LKRALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 R + ++ +L + + G +QA A+++ P Sbjct: 1031 AGRYEQAVADYTAALELDPTDDWALAQRGETHRQAGRYEQAITDYTAALELDPT 1084 >gi|257457415|ref|ZP_05622585.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] gi|257445144|gb|EEV20217.1| tetratricopeptide repeat domain protein [Treponema vincentii ATCC 35580] Length = 580 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 90/263 (34%), Gaps = 27/263 (10%) Query: 131 LAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A M Q + + L + + R + + A A K P+A Sbjct: 200 EQQGRLSDAEASYR-MAWGQDESCYPAGMR-LAYLALRNNNNDIAYEIAEKLYSRYPNAA 257 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIAS 245 + + + Y+ + +A + K ++ R R L + + A Sbjct: 258 AIQLLLAETYLEKGDLEKAEEIVYALLKTGNDFGRPFFLRVRLH----IVKKEYLTANAL 313 Query: 246 YHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIWKVNP-HPEIANIYTH-- 301 + + ++ + + + + L+ +A+ LEK + P E+ + Sbjct: 314 LDEFAKQNRVDKDYL---LLRGRVLLEWSKNVTEAKQCLEKAVTLYPGDSEVMLACANFC 370 Query: 302 ------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +NT + L + N ++ ++ ++ K + + A +A Sbjct: 371 FETKNTVNGKNTNDFI---ETLLKQNPRNILAIRLLVKDDIAEKRWESAFERAQYLYDNN 427 Query: 356 PRKEIFLLLAQIEQANSHNTDKI 378 P +E +L A++ ++ + Sbjct: 428 PSEEDVVLYARVCAGMNNWEAAV 450 >gi|226486966|emb|CAX75348.1| O-glycosyltransferase [Schistosoma japonicum] Length = 1063 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ N +V+ + + ++A + + +++ A +L Sbjct: 253 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 312 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G ++ A+ Y AL + P + + AI + + E+ Sbjct: 313 LKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 370 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + +G + + E++++ A +L + A Sbjct: 371 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 428 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 ++ ++NP H +A+I S N + ++ ++ ++ Sbjct: 429 QRAIQINPAFADAHSNLASILKD--SGNLSEAITSYKTALKLKPNFPDAFCNLA 480 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 11/206 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + + A E L++ T ++ +L G A R +AL+I P+ Sbjct: 310 ANALKEKGKVSEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPE 369 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + L + A+ + + + + A + D+ + Sbjct: 370 FAVAHSNLASMLQLQGKLQEALLHYREAIRISPTF----ADAYSNMGNTLKELQDVQGAM 425 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301 ++++ A A L +A + K+ P+ P+ +A+ Sbjct: 426 QCYQRAIQINPAFADAHSNLASILKDSGNLSEAITSYKTALKLKPNFPDAFCNLAH-CLQ 484 Query: 302 LLSENTVGKLKRALRLEEINKESVES 327 ++ + + R +L + ++ +ES Sbjct: 485 IVCDWS-DYKHRMKKLVSMVQDQLES 509 >gi|256079484|ref|XP_002576017.1| o-linked n-acetylglucosamine transferase ogt [Schistosoma mansoni] gi|238661274|emb|CAZ32252.1| o-linked n-acetylglucosamine transferase, ogt, putative [Schistosoma mansoni] Length = 1063 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 76/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ N +V+ + + ++A + + +++ A +L Sbjct: 253 RAVAAYLRALTLSPNNAVVHGNLACVYYEQNLIDLAIDTYKRAIELQPNFPDAYCNLANA 312 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A+ Y AL + P + + AI + + E+ Sbjct: 313 LKEKGKVLEAEEYYNTALRLCPTHADSLNNLANIKREQGKAEEAIRLYVRALEIYPEF-- 370 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + +G + + E++++ A +L + A Sbjct: 371 --AVAHSNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCY 428 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 ++ ++NP H +A+I S N + ++ ++ ++ Sbjct: 429 QRAIQINPAFADAHSNLASILKD--SGNLADAITSYKTALKLKPNFPDAFCNLA 480 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + H + L L I + + A L+I A Sbjct: 317 GKVLEAEEYYNTALRLCPTHADSLNNL--ANIKREQGKAEEAIRLYVRALEIYPEFAVAH 374 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L G L A + +A+ ISP + ++ A+ + + Sbjct: 375 SNLASMLQLQGKLQEALLHYREAIRISPTFADAYSNMGNTLKELQDVQGAMQCYQRAIQI 434 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + D G++ + +LKL N A A L Sbjct: 435 NPAF----ADAHSNLASILKDSGNLADAITSYKTALKLKPNFPDAFCNLAHCL 483 >gi|227820344|ref|YP_002824315.1| TonB-dependent receptor [Sinorhizobium fredii NGR234] gi|227339343|gb|ACP23562.1| putative exported protein, TonB-dependent receptor protein [Sinorhizobium fredii NGR234] Length = 1198 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 78/282 (27%), Gaps = 45/282 (15%) Query: 80 NYDKG-YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 G Y AL + +I A + +QH + L Q A Sbjct: 334 RQATGAYGALAEAWTAGFRIDIRAAIETIKKAERQH-PDDPSLPAF-RAQFASLLDDRAE 391 Query: 139 AHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + ++ L I A+ + Y + DL A +AL+ +P +P + A+ Sbjct: 392 IRDGIKRALTIDPGDPTALEARAHYR-ADIENDLEGALADLQRALETAPGSPTIWNAIGI 450 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A + K A E + +++ + + + + +L + Sbjct: 451 VQGDRGDNRAA----ERAFKKAIELDPADPNYHANLAIQYLGELRVAEAKREIDAALAVD 506 Query: 257 DNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + + A+ KA L NP + Sbjct: 507 PSFD--IVLVARGWYQLQNGDVEKAVEDLLAGSTANP------AFAGA------------ 546 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++++ E G A A ++ P Sbjct: 547 -------------QMLLAAAYYEKGDHGPAAQALDSADRLDP 575 >gi|297617492|ref|YP_003702651.1| hypothetical protein Slip_1319 [Syntrophothermus lipocalidus DSM 12680] gi|297145329|gb|ADI02086.1| Tetratricopeptide TPR_4 [Syntrophothermus lipocalidus DSM 12680] Length = 722 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 76/244 (31%), Gaps = 36/244 (14%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L + + + A + + ++ T A L R G+ A + + Sbjct: 109 KLSLAGMYMDKGDPVQAEKAYKEIIDEDKTAVEAYQGLAMIYERNGEGEQALAVLEQGIL 168 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADK 239 + A+ Y E +A+ + Q N E R + E DK Sbjct: 169 ANQQDYRAHNALASYYARNGEKDKAVESIVQSLALDVNQAEAYRILKDMYSEDWSELIDK 228 Query: 240 ---------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 G + E LK + + A++ AA + ++K Sbjct: 229 AGSIEDQGIGNIMRFYALYESGQYQEALSLYEEELKQDEANQKAAVLAAACMFRSGDEQK 288 Query: 279 AEVILEK-------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 A +++K W + +IA Y L + L N++++++L IV Sbjct: 289 AGELVQKIAEKPANEWIMA---DIAGYYL-LTGDKDKALAWAGRSLAA-NEQNLDALKIV 343 Query: 332 SKIA 335 A Sbjct: 344 VSAA 347 >gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1] gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1] Length = 345 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 3/126 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y A E + ++I +L +GD A + KAL I + Sbjct: 209 KDYKKAVECYKKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMD 268 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ + ++ + +A+ L ++ A KGD + ES Sbjct: 269 MGIALKELGRYDEALKAYEKAEQINPD---LKALSLYNKACLYASKGDKEKALKLLKESF 325 Query: 254 KLCDNS 259 + + Sbjct: 326 SIDPSL 331 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 13/202 (6%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRA 226 GD A + TKA++I PD + ++ A+ N+ N ++ + Sbjct: 107 GDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYN 166 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + ++ R KGD+ + + +++++ + +KA +K Sbjct: 167 LGIVYR-----IKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYKKA 221 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++NP + N Y + + +K + +I+K S E + + E+G Sbjct: 222 VEINPLFFLGWQNLGNTYLDM--GDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRY 279 Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363 D+A A +I P + L Sbjct: 280 DEALKAYEKAEQINPDLKALSL 301 >gi|196234524|ref|ZP_03133347.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196221404|gb|EDY15951.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 1765 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 111/310 (35%), Gaps = 35/310 (11%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA---HEKLEMMLQI 149 +++ A +P A++ + + + LL E++ IA E + ++ Sbjct: 881 VALQAGRLPEAQEFARSALRLSIDYQMSVRDLLAASATFEEKRAAIAFLREELIRQVVFG 940 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A S FE DL ++ R A +A PD AVV Q V + A+T Sbjct: 941 EG--LLAYRSAAFEVSEPADLLASLRQAHEA---RPDLWHAWSAVVLQLVDMHQLDEALT 995 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 Q + R L + + + + D + +L++ AS A + Sbjct: 996 LAQQATERFPLLPR----LWVDLAQVHRARRDRESEIAPLKRALQISPAWGRASQLLADT 1051 Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKE 323 +A ILE+ P H +AN+ HL E + +L+ AL+L Sbjct: 1052 YERMGNYAEAARILEQAIAATPLDATNHGTLANVLHHLGRKEEAIQRLEHALKL------ 1105 Query: 324 SVESLVIVSKIALEMGSIDQAH--AKAMLAMKIAPR-----KEIFLLLAQIEQANSHNTD 376 E + ALE S +A +A + + +L+LA++ + Sbjct: 1106 --EPNYNFAWDALESWSRGKAANGNRAAVLARELTTLRPGEASSWLVLARV--SVGAPLA 1161 Query: 377 KILYWTQSAL 386 + L AL Sbjct: 1162 ERLDALDRAL 1171 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 10/248 (4%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L Y A LE + +L +G A + AL + Sbjct: 1047 LLADTYERMGNYAEAARILEQAIAATPLDATNHGTLANVLHHLGRKEEAIQRLEHALKLE 1106 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P+ + +A ++ + K + + ++ + L++AR G +A Sbjct: 1107 PNYNFAWDA-LESWSRGKAANGNRAAVLARELTTLRPGEASSWLVLAR----VSVGAPLA 1161 Query: 245 SYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW--KVNPHPEIA-NIYT 300 DA++ +L L A L + +A V P P + Sbjct: 1162 ERLDALDRALALDPRLADAHDLRVTLLTGARRFDEAIAACSPTVFGGVIPTPLRGRAAWV 1221 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 T + + ++ E + ++++ + +A A ++APR I Sbjct: 1222 DAQQGRTRAAIAQMRQVVEASPNYYWGWNMLAEWYCADNNFTEAQEAARKMARLAPRSAI 1281 Query: 361 -FLLLAQI 367 LA I Sbjct: 1282 PLGYLADI 1289 >gi|146283511|ref|YP_001173664.1| TPR domain-containing protein [Pseudomonas stutzeri A1501] gi|145571716|gb|ABP80822.1| TPR domain protein [Pseudomonas stutzeri A1501] Length = 594 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 87/284 (30%), Gaps = 39/284 (13%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 S ++ +F + L LL ++A +++IA A + + Sbjct: 57 AASDAAEYGSFSRQSLYALLVAELAGQRNRFDIALGNYVQQAHATQDAGVAERG-FRIAE 115 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 +G +A A +P++ A Q A + ++ F+ + + + Sbjct: 116 YLGADQAALDTALIWARNAPESLDAQRAAAVQLARAGRYEESLEFMEKVLQGQGD-THFD 174 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNS-------------------------- 259 + L A + + ++ S+ + Sbjct: 175 FLALSASETDPDTRAGLLQSFDKLLLKHPNNPQLSFGKAVLLQQDDRSEEALALLQEQPN 234 Query: 260 ----IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHL--LSENTVGK 310 I + + A+ L S + +A +LEK + HPE + Y L E Sbjct: 235 KQRQIPSILLEARLLHSLQRSDQALPLLEK--SLRQHPEDKRLRLTYARLLVEQERLEDA 292 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + L + + + ++ + +E + +A ++ Sbjct: 293 MGEFATLVQQHPADDDLRFSMALVCMEAEAWREATVYLEELIER 336 >gi|145634448|ref|ZP_01790158.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae PittAA] gi|145268428|gb|EDK08422.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae PittAA] Length = 396 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 51/288 (17%) Query: 98 HNIPLARKMHSYVS--QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + +TF + L + + ++ A +++ P Sbjct: 91 GEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +A AL + ++ Y KEW +A+ + Sbjct: 147 --------------------FAENAL----------QQLLVIYQKTKEWKKAVNIAEKLA 176 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + N ++ + + ++L + + AS+ A + + Sbjct: 177 KIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQ 236 Query: 276 KRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVGK-LKRALRLEEINKESVES 327 ++A ILE + + NP P + + Y L + L RA ++ + E Sbjct: 237 YQQAVEILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFELFLIRAGQII----NNDEV 291 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-QIEQANSH 373 + + K+ E A AK + P IF + QI+ A Sbjct: 292 ELALVKLIEEKDGKSAAQAKLYQQLTKNPSTLIFHRFMQYQIDDAEDG 339 >gi|67458702|ref|YP_246326.1| TPR repeat-containing protein [Rickettsia felis URRWXCal2] gi|67004235|gb|AAY61161.1| Tetratricopeptide repeat domain containing protein [Rickettsia felis URRWXCal2] Length = 706 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 78/207 (37%), Gaps = 27/207 (13%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNAKE- 220 +A +Y K L+ P ++Q + A+ L+ K + Sbjct: 19 LEEEKYETAIKYFDKVLNQDPFLSSAYSNKAFALKQLCRIE---EALEVLDTAIKINPKI 75 Query: 221 --WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + NR I+L L + ++LKL ++ I +L + K RK Sbjct: 76 SGYYDNRGIVLSILGL-------YEEAIKSYDQALKLDSLDVLTFINKGWTLNNWGKYRK 128 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-------EINKESVESLVIV 331 A +L+K +++P +I Y + ++ KL + + EIN E Sbjct: 129 ALSVLDKAIELDPT-DI-KAYAN--KAISLEKLGKFDEMVHMYNKALEINPNYSELYFDR 184 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358 +K +++G ++A A++I P + Sbjct: 185 AKALIDIGEKEKALIDINKAIEINPNE 211 >gi|300940851|ref|ZP_07155381.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] gi|300454409|gb|EFK17902.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] Length = 944 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATNNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATNNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 >gi|253998548|ref|YP_003050611.1| hypothetical protein Msip34_0836 [Methylovorus sp. SIP3-4] gi|253985227|gb|ACT50084.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4] Length = 927 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 14/205 (6%) Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + + G+L AQ Y ++ L+ SP+ P + Y+ +++++R I + + Sbjct: 8 LMQRAVACHQTGNLMEAQNYYSQVLEESPENPDALHLLGVTYMQSRDYARCIPVIQKAL- 66 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E+N A + + ++++ L + A S + + Sbjct: 67 ---EYNPRHADAHYNLGIAFGAVRQYPQAIASYMQAIALKPDRAEAYYNLGVSHAALGQL 123 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331 A ++ ++N P Y +L L + + E+ + Sbjct: 124 EPATASYKEAIRLN--PAYIKAYRNLGVVLEAQGKHTEATAAYQSLLKFRPDDAEAHHQL 181 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356 + D+A A++I P Sbjct: 182 AINFSTQKKFDEAIIHYSRAIEINP 206 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 37/188 (19%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILL 229 A + KAL+I PD ++ Y ++ AI + + + + Sbjct: 294 EEAIHHYKKALEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALMPNYAEAICNLGI 353 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + AI DN I A + A++ + +A Sbjct: 354 TLCATLEVEAAIPLLKQSLAI----YADNLI-AHVHLAETYAVLGRFEEAA--------- 399 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 PH E A +L E N + + ++ I ++ G D A Sbjct: 400 -PHYEYAL------------------KLSEKNPQLIN---ALANIYVKTGQHDLAKEYFE 437 Query: 350 LAMKIAPR 357 A++I PR Sbjct: 438 RALEIDPR 445 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 99/305 (32%), Gaps = 66/305 (21%) Query: 69 PAMLFHMLH----KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYL 121 P + + K + + Y L G+ A + A + + + L Sbjct: 90 PQAIASYMQAIALKPDRAEAYYNL--GVSHAALGQLEPATASYKEAIRLNPAYIKAYRNL 147 Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 +LE Q ++ A + +L+ A + L + A + ++A+ Sbjct: 148 GVVLEAQ-----GKHTEATAAYQSLLKFRPDDAEAHHQLAINFSTQKKFDEAIIHYSRAI 202 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +I+P+ V Y ++AI K AIL+ ++E Sbjct: 203 EINPE-------FVDAYC-----NKAIAL-------GKLNKLEDAILMYKAAIELVPDEA 243 Query: 242 MI-----------ASYHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 I + +A+ +++L + A A +LI + +A +K Sbjct: 244 SIYNNLGNIFSRKRQFEEALSCFENAIRLQPTYLKAHCNAGNALIDLERVEEAIHHYKKA 303 Query: 287 WKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLV---------IV 331 +++P H + Y+ L + +RA+ L E++ + Sbjct: 304 LEIHPDHAEAHNSLGIAYSKLSRYNEAIASYQRAIALM---PNYAEAICNLGITLCATLE 360 Query: 332 SKIAL 336 + A+ Sbjct: 361 VEAAI 365 Score = 37.2 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 78/271 (28%), Gaps = 24/271 (8%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 P A + E L AL Q A + +++ A + Sbjct: 89 YPQAIASYMQAIALKPDRAEAYYNLGVSHAAL--GQLEPATASYKEAIRLNPAYIKAYRN 146 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G A L PD + + K++ AI ++ + Sbjct: 147 LGVVLEAQGKHTEATAAYQSLLKFRPDDAEAHHQLAINFSTQKKFDEAIIHYSRAIEINP 206 Query: 220 EWNRNRAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E+ A A +L +K D I Y AIE L + + + + Sbjct: 207 EF--VDAYCNKAIALGKLNKLEDAILMYKAAIE---LVPDEASIYNNLGNIFSRKRQFEE 261 Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A E ++ P H N L E + + EI+ + E+ + Sbjct: 262 ALSCFENAIRLQPTYLKAHCNAGNALIDL--ERVEEAIHHYKKALEIHPDHAEAHNSLGI 319 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 ++ ++A IA + L+ Sbjct: 320 AYSKLSRYNEA---------IASYQRAIALM 341 >gi|268316984|ref|YP_003290703.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262334518|gb|ACY48315.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM 4252] Length = 1138 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 1/128 (0%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 E + AL + A LE + ++ A +L + R DL +A+RY Sbjct: 36 QETVTAFYTGLAALQAGEDRGARTLLERVTELAPGEPAAWANLGLLALRRNDLEAARRYL 95 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A ++P++ + + + + ++ A L ++ + A LL + Sbjct: 96 GEAARLAPESARIQVLLARLALAEEQPDAARRHLLAALQH-DPADLEAAYLLFQLLEAHP 154 Query: 238 DKGDMIAS 245 GD + + Sbjct: 155 TPGDTLTA 162 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 1/93 (1%) Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RK 358 L + G R+ E+ + + +AL ++ A A ++AP Sbjct: 47 AALQAGEDRGARTLLERVTELAPGEPAAWANLGLLALRRNDLEAARRYLGEAARLAPESA 106 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 I +LLA++ A + + H D Sbjct: 107 RIQVLLARLALAEEQPDAARRHLLAALQHDPAD 139 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 6/131 (4%) Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPEIAN--IYTHLLSENTVGKLKRALRLEEINKESV 325 + + + R A +LE++ ++ P P L + + + ES Sbjct: 47 AALQAGEDRGARTLLERVTELAPGEPAAWANLGLLALRRNDLEAARRYLGEAARLAPESA 106 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANS-HNTDKILYWT 382 V+++++AL D A + A++ P + +LL +E + +T Sbjct: 107 RIQVLLARLALAEEQPDAARRHLLAALQHDPADLEAAYLLFQLLEAHPTPGDTLTADTLL 166 Query: 383 QSALHAMPDPL 393 L D Sbjct: 167 ARMLRHRSDNQ 177 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 52/171 (30%), Gaps = 19/171 (11%) Query: 200 LAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 A E A T L + + + L + D+ A+ E+ +L Sbjct: 50 QAGEDRGARTLLERVTELAPGEPA------AWANLGLLALRRNDLEAARRYLGEAARLAP 103 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-------THLLSENTVGK 310 S + A+ +++ + A L + +P ++ Y H +T+ Sbjct: 104 ESARIQVLLARLALAEEQPDAARRHLLAALQHDPA-DLEAAYLLFQLLEAHPTPGDTLTA 162 Query: 311 LKRALRLEEINKESVE---SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 R+ ++ + + + ++ + A + P + Sbjct: 163 DTLLARMLRHRSDNQALWLERLRRAIATQDARTLQETIAHLQALVDTWPDE 213 >gi|146280674|ref|YP_001170827.1| cellulose synthase subunit BcsC [Pseudomonas stutzeri A1501] gi|145568879|gb|ABP77985.1| cellulose synthase operon C protein, putative [Pseudomonas stutzeri A1501] Length = 1152 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 84/325 (25%), Gaps = 65/325 (20%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + AL ++ A + Y + L Q+A AE + + A Sbjct: 353 WLALEQADQALEQQRPREAAAL--YTRALRQQPDSLFAALGLAQVAEAEGRTDEAEAAYR 410 Query: 145 MMLQIPATREFAVYSLYF------------------------------------------ 162 +L A+ L Sbjct: 411 RLLARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLARYQLQAD 470 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ GD +A +A + P+ PW+T + + A + + Sbjct: 471 QALERGDQAAASEALRQARRLDPNDPWLTYRLANSLRTQGAFYEADSTFDDLLARKPADP 530 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-----NKKR 277 R + + D + + I++ D+ A + + K R Sbjct: 531 TTRYAHALYLAAAERDAQALTSLQQ--IQASDWNDD---IRALATRVERREFMSRVAKLR 585 Query: 278 KAEVILEKI----WKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVES 327 A ++ H + + + E + A L I+ E + Sbjct: 586 AAGRETAAADLMQQRLRSHGDSVDDLLLLADWAVERGEPAAAQSYLARAL-RIDPEHAAA 644 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAM 352 + ++ L G +++A A Sbjct: 645 RLAQIELLLAAGQVNEASQALHDAP 669 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 86/286 (30%), Gaps = 28/286 (9%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q +R A + Q P + A+ L + G + A+ + L P Sbjct: 361 QALEQQRPREAAALYTRALRQQPDSLFAAL-GLAQVAEAEGRTDEAEAAYRRLLARDPAN 419 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIAR----SLENADKGDM 242 +V+ Y RA+ F+ +E+N R LL+AR + + ++GD Sbjct: 420 GGAIRGLVRLYRAESA-ERALAFIETLAAPQRQEFNELRNALLLARYQLQADQALERGDQ 478 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---------- 292 A+ ++ +L N + A SL +Q +A+ + + P Sbjct: 479 AAASEALRQARRLDPNDPWLTYRLANSLRTQGAFYEADSTFDDLLARKPADPTTRYAHAL 538 Query: 293 ------PEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAH 345 + A T L L + + S V + A G A Sbjct: 539 YLAAAERD-AQALTSLQQIQASDWNDDIRALATRVERREFMSRVAKLRAA---GRETAAA 594 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 ++ LLL + AL P+ Sbjct: 595 DLMQQRLRSHGDSVDDLLLLADWAVERGEPAAAQSYLARALRIDPE 640 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 84/274 (30%), Gaps = 40/274 (14%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 E+ + +L P R L G +A+ +AL P P + Sbjct: 252 AGDARQHLERQQRLLADPLWR-AGQEGLRL--LDQGQDEAAEAKLRQALRGYPKDPELLG 308 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWN----------RNRAILLIARSLENADKGDM 242 + + A+ + + K N + + R L + ++ + ++ Sbjct: 309 GLGLALMRPGHRPEALVYFQRAKDNEADIDNLSKWSDLIDSTRYWLALEQADQALEQQRP 368 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + +L+ +S+ A++ A+ ++ + +AE Y L Sbjct: 369 REAAALYTRALRQQPDSLFAALGLAQVAEAEGRTDEAE----------------AAYRRL 412 Query: 303 LSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L+ + G ++ +RL I + A + ++ +LA Sbjct: 413 LARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLA--------R 464 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 + L A + + + A P+ W Sbjct: 465 YQLQAD-QALERGDQAAASEALRQARRLDPNDPW 497 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 16/120 (13%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--------- 214 + G+ +AQ Y +AL I P+ A ++ + A + + A L+ Sbjct: 618 AVERGEPAAAQSYLARALRIDPEHAAARLAQIELLLAAGQVNEASQALHDAPPQFGNDEP 677 Query: 215 KKNAKEWNRNRAILLIARSLENA-------DKGDMIASYHDAIESLKLCDNSIMASICAA 267 + N A+ +A++ + ++ D + A + + MA A Sbjct: 678 NAIRRLANSWAAVGEVAKARQMLEQLEAQVEEPDPLLRRDTARLLARTEPDRAMAYYRKA 737 >gi|298248828|ref|ZP_06972633.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297551487|gb|EFH85353.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 635 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 68/251 (27%), Gaps = 22/251 (8%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 +L + A E + T A+ ++G L A +A Sbjct: 361 TLVLRAFSLRELGKLEEALAVYEQAANLDPTEARALRGKGDVLLQLGRLEEALAVYEQAA 420 Query: 182 DISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 ++ P + ++Q A+ Q + + ++ + Sbjct: 421 NLDPIGSLCGKGDVLLQL----GRLEEALAVYEQAI----DLDPTDVSTYWSKGDVLDNL 472 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G + + L + L + +A EK + P + Y Sbjct: 473 GRREEALAVYERATNLDPTDVHTHWLRGDMLRKLGRLEEALAAFEKAVNLEPT----HFY 528 Query: 300 THLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + L R + + + + + ++ +G +++A A + Sbjct: 529 ALLGKGRVLDNLGRLEEALVVFEKAINLEPIHILTRLEKGRVLDNLGRLEEALAVYEQII 588 Query: 353 KIAPR-KEIFL 362 + P + Sbjct: 589 NLDPTDASAYT 599 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 49/162 (30%), Gaps = 8/162 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A E + T + G L A KA+++ P + Sbjct: 473 GRREEALAVYERATNLDPTDVHTHWLRGDMLRKL--GRLEEALAAFEKAVNLEPTHFYAL 530 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + A+ + E L R L+N G + + + Sbjct: 531 LGKGRVLDNLGRLEEALVVFEKAI--NLEPIHILTRLEKGRVLDNL--GRLEEALAVYEQ 586 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + L A + +L+ ++ +A + E+I + +P P Sbjct: 587 IINLDPTDASAYTFKSSALLKLGRREEALAVYEQIKEKSPGP 628 >gi|297569516|ref|YP_003690860.1| response regulator receiver protein [Desulfurivibrio alkaliphilus AHT2] gi|296925431|gb|ADH86241.1| response regulator receiver protein [Desulfurivibrio alkaliphilus AHT2] Length = 387 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 68/229 (29%), Gaps = 21/229 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A + + + L ++ + A E +Q + Sbjct: 153 GDLAGAIAEAKKAASLNAHSSRPFREL--GRLFAKKGDIQKAQACFEQAIQRNRLDVTSY 210 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++L + R + A Y ++A++ISP + + A L ++ Sbjct: 211 HALGQIAFRRNNSEKAIGYFSRAMEISPRHTDRALQFAKLLFKKNQLQEAEKVLKLVLRH 270 Query: 218 A---KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ A + + L N + E +K ++I+ Sbjct: 271 KTNDTDFKEEVAEIALQAGLSNL-------ALKAFREVIKADPQRTYLHKRIGTAMINAG 323 Query: 275 KKRKAEVILEKIWKVNPHPE-----IANIYTH----LLSENTVGKLKRA 314 + + +LE + P +A Y + ++N + R Sbjct: 324 EYAEGTRMLETALEKTPQDIQTMLRLARAYLEMKMPMRADNWASRALRI 372 >gi|16265215|ref|NP_438007.1| TonB-dependent receptor protein [Sinorhizobium meliloti 1021] gi|15141355|emb|CAC49867.1| hypothetical exported protein, TonB-dependent receptor protein [Sinorhizobium meliloti 1021] Length = 1200 Score = 49.5 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 7/162 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 DL A +AL +P + + ++ + A K A + Sbjct: 421 DNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAA----EAAFKQAIALDPLDP 476 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +++ D+ M + + +L + + +A + + + + KA L Sbjct: 477 VSHANLAIQYMDEMRMAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAG 536 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESV 325 NP A + ++ A L + ++ Sbjct: 537 STANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPNDP 578 >gi|288817575|ref|YP_003431922.1| hypothetical protein HTH_0254 [Hydrogenobacter thermophilus TK-6] gi|288786974|dbj|BAI68721.1| hypothetical protein HTH_0254 [Hydrogenobacter thermophilus TK-6] gi|308751175|gb|ADO44658.1| TPR repeat-containing protein [Hydrogenobacter thermophilus TK-6] Length = 159 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 5/150 (3%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDIS 184 A E + ++I T Y+ + +G+ A +A+ + Sbjct: 14 RAYTYHMMGDIEKAIEFYKQSIEIYPTALA--YTFLGWAYSMLGEYEKAIEMCEQAIKLD 71 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 PD + + + A+ +L + R+ + +AR+ G Sbjct: 72 PDLGNPYNDIGSYLIALGRYEEAVPWLKRAIVAKNYEPRHYPHMNLARA--YLAMGRFKD 129 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQN 274 + +A ++KL + A I + L N Sbjct: 130 ALKEAENAIKLAPDYKPAHILKHQILGMLN 159 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 12/143 (8%) Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R A L R+ GD+ + +S+++ ++ A + + KA + Sbjct: 5 RKDAQELFNRAYTYHMMGDIEKAIEFYKQSIEIYPTAL-AYTFLGWAYSMLGEYEKAIEM 63 Query: 283 LEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 E+ K++ P++ N Y + E V LKRA+ + + +++ Sbjct: 64 CEQAIKLD--PDLGNPYNDIGSYLIALGRYEEAVPWLKRAIVAKNYEPRHY-PHMNLARA 120 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 L MG A +A A+K+AP Sbjct: 121 YLAMGRFKDALKEAENAIKLAPD 143 >gi|213649587|ref|ZP_03379640.1| putative protoheme IX biogenesis protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 221 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 4/129 (3%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 22 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 81 Query: 81 YDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 + K L+ +A + K M + YLL + A A Sbjct: 82 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADH---AEQPVVNYLLAAEAAQQRGDEARA 138 Query: 140 HEKLEMMLQ 148 ++ LE + Sbjct: 139 NQHLERAAE 147 >gi|145234446|ref|XP_001400594.1| pre-mRNA-splicing factor prp1 [Aspergillus niger CBS 513.88] gi|134057540|emb|CAK48894.1| unnamed protein product [Aspergillus niger] Length = 939 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 115/334 (34%), Gaps = 45/334 (13%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SIA AR +++Y + + A ER + +++ + Sbjct: 550 SIARGKYETARAIYAYALRVFVNRRSIWIA-----AAELERNHGSKEALWQVLEKAVEAC 604 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + E + L E + G+++ A+R +A + +P+ + A V+ A + S A Sbjct: 605 PQSEELWLQ-LAKEKWQSGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADANQTSEARE 663 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240 L ++ A + R L N D+ Sbjct: 664 LLATARREAGTDRVWIKSVAFERQLGNIDEALDLVNQGLQIYPKADKLWMMKGQIYEAQN 723 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + C+ SI + A++ KA +L++ P PE+ Sbjct: 724 KYPQAREAYGTGTRACNKSIPLWLLASRLEEKAGAVVKARSVLDRARLAVPKSPELWTES 783 Query: 300 THLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + E + +A L +E S ++ S+ + Q A+++ A+K A Sbjct: 784 VRV--ERRANNIAQAKVLMAKALQEVPTSGLLWSESIWHLEPRAQRKARSLEAIKKADND 841 Query: 359 EIFLL-LAQIEQANSHNTDKILYWTQSALHAMPD 391 I + +A+I +K L W + A+ + D Sbjct: 842 PILFITVARIFWGERR-LEKALTWFEKAIVSDSD 874 >gi|328868476|gb|EGG16854.1| RNA polymerase II complex component [Dictyostelium fasciculatum] Length = 1047 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 59/158 (37%), Gaps = 1/158 (0%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + + +L+I A+ +L GD+++ + +A +++P+ P V Sbjct: 253 GKIEAAKKAFQRVLEIDLDNVDALVALATIHTNQGDIDTGMKLIVQAYELAPNNPIVLNQ 312 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + ++++ + L Q + + N+ +A + + + ++ Sbjct: 313 LANHFFYKGDYTK-VHALAQAAMSNTDINQIKAEASYIIAKAYHATDKWNEALQNYHQAT 371 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +A + + N KA E + + P Sbjct: 372 LKSPDFYLAQFGLGQVYLHNNDYEKAVGCFEAVLEKQP 409 >gi|324503304|gb|ADY41438.1| Pre-mRNA-processing factor 6 [Ascaris suum] Length = 970 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 93/255 (36%), Gaps = 34/255 (13%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----------- 216 GD+ S++ +A +P++ + A V+ E+ RA L + ++ Sbjct: 651 GDVKSSREILARAFQNNPNSEEIWMAAVKLESENNEYQRARKLLEKAREIAPSPRIFLKS 710 Query: 217 ------------------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 +A + + A L + + + + + E +K C + Sbjct: 711 VRLEWCLGDLKAAKKLLLDALDRYPDTAKLYLMMGQILSQEDNFNEARRYYCEGVKRCPS 770 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317 SI I ++ SQ + KA LE+ NP +PE+ + + + +L RL Sbjct: 771 SIPLWIWLSRLEESQKQIIKARSDLERARLQNPKNPELWLESIRIEARAGLRELAH-ERL 829 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTD 376 E S + ++ A+ M K++ A+K ++ L ++++ Sbjct: 830 ARALHECEHSGRLWAE-AIFMEERHGRRTKSVDALKKCEHDADVLLAVSKLFWTERK-VK 887 Query: 377 KILYWTQSALHAMPD 391 K W Q + PD Sbjct: 888 KAREWFQRTVKIDPD 902 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 85/228 (37%), Gaps = 23/228 (10%) Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222 A+ AL + P + W A ++ + A+ + L + + Sbjct: 581 AQEAFECARAVYRHALSVYPTKKSIWFAAADFERNHGTAESYD---DLLQSAVEKCPKAE 637 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + KGD+ +S + + NS + A K N+ ++A + Sbjct: 638 ----TLWLMYAKSKWMKGDVKSSREILARAFQNNPNSEEIWMAAVKLESENNEYQRARKL 693 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL----EEINKESVESLVIVSKIALEM 338 LEK ++ P P I + E +G LK A +L + ++ + +++ +I + Sbjct: 694 LEKAREIAPSPRI--FLKSVRLEWCLGDLKAAKKLLLDALDRYPDTAKLYLMMGQILSQE 751 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN------SHNTDKIL 379 + ++A +K P + L+++E++ + ++ Sbjct: 752 DNFNEARRYYCEGVKRCPSSIPLWIWLSRLEESQKQIIKARSDLERAR 799 >gi|301609916|ref|XP_002934497.1| PREDICTED: tetratricopeptide repeat protein 13 [Xenopus (Silurana) tropicalis] Length = 839 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 + A + MLQ A+ + + + D+ +A + + + PD Sbjct: 136 SGLQDEAIKHFSSMLQEEPDLVSAIYGRGIAYARKGLQDIKNAELALFELSRVISLEPDH 195 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + S A++ L + + R+R L D +A+ Sbjct: 196 PEVFEQRAEILSPLGRISEALSDLTRAIQLQPSARLYRHRGTLHFISE-------DYLAA 248 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 D SL L N ++ + ++A ++ K + + + Y Sbjct: 249 QEDFQRSLGLNQN-QPIAVLYKGLTFFHRGLLKEAIDSFKEALKQKSNFIEAYKSLGQAY 307 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + ++ + +N+ V++L + + GS+ +A +++ P E Sbjct: 308 RELGNFEAA--MENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNFKRCLQLEPYNE 365 Query: 360 IFLLL 364 + + Sbjct: 366 VCQYM 370 >gi|238020698|ref|ZP_04601124.1| hypothetical protein GCWU000324_00588 [Kingella oralis ATCC 51147] gi|237867678|gb|EEP68684.1| hypothetical protein GCWU000324_00588 [Kingella oralis ATCC 51147] Length = 390 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 98/311 (31%), Gaps = 42/311 (13%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +L P T R +Y L G ++ A++ + L A Sbjct: 89 GENDKAIAMHKALLDSPDTVGDKRTRVLYELGLNYQSAGLVDRAEQIFLE-LQQGNMAKQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY--- 246 E ++ Y ++W +AI + + + A + K + Sbjct: 148 ANEVLLNIYQQDRDWEQAIATAQLLAHDEQTYQFEMAQFYCEIAQSELFKSQFEQARAHI 207 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE- 305 A+ + K C A++ Q + A I K N + Y ++ E Sbjct: 208 QAALSANKKC---TRANMILGDIEQKQGNFQAAIDAYTAIEKQN------HAYLSMIGEK 258 Query: 306 --NTVGKLKRA----LRLEEINKESVESLV--IVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L +A L K + + ++ + +L + ++A+ + ++I P Sbjct: 259 LYDAYDALGKAQDGLEVLIGYAKMFPQLDLNSVIYEKSLLLWGEEKANQTMVELVRIKPD 318 Query: 358 K-EIFLL----LAQIEQANSHNTDKILYWTQSALHAMPDPLWI--SDDGYLSSV---WLP 407 ++ L ++ + + D + + W+ + + S W Sbjct: 319 LNGMYRLLGLQMSDLNPQWKADADMMRTVIGRQVQRS----WMYRCRNCHFKSQVFFWH- 373 Query: 408 LSPISKTLCYF 418 P F Sbjct: 374 -CPACNKWETF 383 >gi|73540408|ref|YP_294928.1| HemY, N-terminal:tetratricopeptide TPR_4 [Ralstonia eutropha JMP134] gi|72117821|gb|AAZ60084.1| HemY, N-terminal:Tetratricopeptide TPR_4 [Ralstonia eutropha JMP134] Length = 396 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 51/399 (12%), Positives = 129/399 (32%), Gaps = 16/399 (4%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +RL+ + ++ + + + +V + + S + L++L F + + Sbjct: 1 MRLLFWVAILFGGAVGLALFTQFNHSNVVLFYPPYRVELSLNLALALLLLVFFVVWTVLS 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 +R P + +K AL + ++ A A + Sbjct: 61 TARHLSEMPRRAAAYRERSRMNKAQAALRESIENLFAGRFARAERAAREAQSWDAQVQTA 120 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ + A ++ + + + P + + S+ D + A + Sbjct: 121 A--LVGARAAHRMQETDR-RDAWMAQVTDPEREQARLVSMAELLMDARDADGALETIAQL 177 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 V ++ + K WS + L + + + A+ L + E Sbjct: 178 QAQGARQIHVQRIALRAHQHLKNWSEVLR-LARSLEKRNALHPVLALRLKQMACEAMLDE 236 Query: 241 DMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + + L + A+ AA+ + ++ +A I+E KV+ + Sbjct: 237 RRHDAEALSSFWRTLSADERRAARIAEPAARYFAALGRQDEARRIIEDALKVHWDSRLVL 296 Query: 298 IYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y + + + +++A + + + + + L +A + A+K A Sbjct: 297 RYADCARAGHALPLIQQAEKWINEHPADPDLYFTLGVLCLGEQLWGKAQSSFERALKYAD 356 Query: 357 -------RKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 R L LA++ + + ++ +SA+ A Sbjct: 357 RHQQTRLRVRTHLALARLFEETERPEEAQRHYRESAMLA 395 >gi|32474237|ref|NP_867231.1| PKR inhibitor (translation regulation) [Rhodopirellula baltica SH 1] gi|32444775|emb|CAD74776.1| probable PKR inhibitor (translation regulation) [Rhodopirellula baltica SH 1] Length = 778 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 88/267 (32%), Gaps = 16/267 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + K S + + L YLL + +A + + P+ E Sbjct: 352 GDEERIAKATSAAIKLLQDDPKELSTAYLLRAMT-QDKTDDQLADLT-KAIELDPSNAEA 409 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 V + GD + A K L++ P + A VQQ V A+ L++ Sbjct: 410 -VRQRAGLRMQEGDFDKAVEDLQKVLELDPTNEQIAAATVQQLVELDRADDALELLSKTI 468 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + R L+ +++ D + D ++L + +A + A+ + ++ Sbjct: 469 QARPSEGLYRLRALLYTNMDREDD-----ALADLNKALAMQPKDPIALLQRAEISLRRDD 523 Query: 276 KRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + A+ L+ + P E + + + + L + + + V + Sbjct: 524 VKDAKRDLDAAIDLAPQVEQLDQAIVVRCFIAVEEGRMADAINDMKILIDRSPDDVYRQL 583 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + L+ QA + P Sbjct: 584 QLANLYLQDDRPRQAIDMLSGVLDRDP 610 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 55/138 (39%), Gaps = 11/138 (7%) Query: 230 IARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLI----SQNKKRKAEV 281 +A ++ + +A+ ++++ A + A+ + + + KA Sbjct: 303 LAGAMTRMRGRRALQVRDEALRVLDQAIENDPELAEAHMLIARLNLLPDGDEERIAKATS 362 Query: 282 ILEKIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K+ + +P E++ Y + + T +L + E++ + E++ + + ++ G Sbjct: 363 AAIKLLQDDPK-ELSTAYLLRAMTQDKTDDQLADLTKAIELDPSNAEAVRQRAGLRMQEG 421 Query: 340 SIDQAHAKAMLAMKIAPR 357 D+A +++ P Sbjct: 422 DFDKAVEDLQKVLELDPT 439 >gi|115350209|ref|YP_772048.1| hypothetical protein Bamb_0153 [Burkholderia ambifaria AMMD] gi|115280197|gb|ABI85714.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria AMMD] Length = 754 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 81/261 (31%), Gaps = 34/261 (13%) Query: 133 ERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 +++ A E + + T + +C++G + +A+ + D Sbjct: 18 AGRFDDARMLYEAIRRDEPDQPDATHFLGL-----LACQLGQFPAGLALMERAIALRADP 72 Query: 188 PWVTEA--VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++ +++ + + AI + A ++ A D GD A+ Sbjct: 73 VYLNNFGNMLRAHGRLGD---AIGAYRRAIALAPDY----AEAHSNLGNALRDAGDADAA 125 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-S 304 ++L L + A +L + + A EK ++P Y + Sbjct: 126 MLSCAQALALRPDYAPAFNNLGNALQDKGELDAAARAYEKAIALDP------GYAQARFN 179 Query: 305 ENTVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + V + +R + + + + E + A A A + Sbjct: 180 QGNVLRAQRRPDEAIACYREAIALQPHLHAAHHALGVLLFERDDREAAIASLTRAAESGE 239 Query: 357 RKEIFLLLAQIEQANSHNTDK 377 +F L A +E+A + Sbjct: 240 ADCLFHLAAALERAGDLDGTV 260 >gi|119480403|ref|XP_001260230.1| mRNA splicing factor (Prp1/Zer1), putative [Neosartorya fischeri NRRL 181] gi|119408384|gb|EAW18333.1| mRNA splicing factor (Prp1/Zer1), putative [Neosartorya fischeri NRRL 181] Length = 938 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 55/335 (16%), Positives = 115/335 (34%), Gaps = 47/335 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SIA AR +++Y + L A ER + +++ + Sbjct: 548 SIARGKYETARAIYAYALRVFVNRR---SIWLAA--ADLERNHGSKEALWQVLEKAVEAC 602 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + E + L E + G+++ A+R +A + +P+ + A V+ A + +A Sbjct: 603 PQSEELWLQ-LAKEKWQAGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADADQTDQARE 661 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240 L ++ A + R L N D+ Sbjct: 662 LLATARREAGTDRVWIKSVAFERQLGNIDEALDLVNQGLQLYPKADKLWMMKGQIYEYQN 721 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + C S+ + A++ KA +L++ P+ A ++T Sbjct: 722 KYPQAREAYSTGTRACPKSVPLWLLASRLEEKSGAVVKARSVLDRARLAV--PKSAELWT 779 Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356 + E + +A L +E S ++ S+ LE + +A + K+ Sbjct: 780 ESVRVERRANNIGQAKVLMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDN 838 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F+ +A+I +K + W + A+ + D Sbjct: 839 DPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 872 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 9/151 (5%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + +G + +L++ N + AA + K +LEK + P Sbjct: 545 AKGSIARGKYETARAIYAYALRVFVNRRSIWLAAADLERNHGSKEALWQVLEKAVEACPQ 604 Query: 293 PE-----IA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 E +A + ++ L RA N + + + K+ + DQA Sbjct: 605 SEELWLQLAKEKWQAGEIDDARRVLGRA---FNQNPNNEDIWLAAVKLEADADQTDQARE 661 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 A + A +++ E+ + + Sbjct: 662 LLATARREAGTDRVWIKSVAFERQLGNIDEA 692 >gi|332703109|ref|ZP_08423197.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio africanus str. Walvis Bay] gi|332553258|gb|EGJ50302.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio africanus str. Walvis Bay] Length = 814 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 5/165 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G S+ AR + H L+ L Q+A + A E + Sbjct: 655 GTTSLRLGEFERARAAFERCLKLKPGHVYSLIRL--GQLAERDNDLPTAGEYYLRASETK 712 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R + L G A+ +AL ++P + + Y+ A E Sbjct: 713 IGRILTMRHLARLDLAEGRFEEARENLHQALILNPYDAMAVHLMAKLYLEAGEDPEIAET 772 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 L ++ K LL + G + + L Sbjct: 773 LARQSVTLKPDKAQYWRLL---AQALEACGKPDEARKAMERAESL 814 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 34/218 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E++ A Y+L S R+G+ A+ + L + P + Sbjct: 628 GRPEQALTLFEIVAAKHPEDLMAAYNLGTTSLRLGEFERARAAFERCLKLKPGHVYSLIR 687 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + ++ + + A E R + + + + +G + + ++L Sbjct: 688 L--GQLAERD--NDLPTAGEYYLRASETKIGRILTMRHLARLDLAEGRFEEARENLHQAL 743 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 L MA AK + + PEIA Sbjct: 744 ILNPYDAMAVHLMAKLYLEAGED----------------PEIAETL-------------- 773 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 A + + + + ++++ G D+A A Sbjct: 774 ARQSVTLKPDKAQYWRLLAQALEACGKPDEARKAMERA 811 >gi|325087689|gb|EGC40999.1| DnaJ domain-containing protein [Ajellomyces capsulatus H88] Length = 744 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%) Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ V+ L A + ML+ + G+ A ++ Sbjct: 395 RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 452 Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225 AL + PD+ + +++ ++++ AI + + + Sbjct: 453 KLALSLDPDSAQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 512 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + LL R+ + + D +LKL + A AK+ + +A +K Sbjct: 513 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 572 Query: 286 IWKVNP 291 I + NP Sbjct: 573 IAEANP 578 >gi|320536427|ref|ZP_08036464.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] gi|320146737|gb|EFW38316.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] Length = 865 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 8/165 (4%) Query: 123 YLLEVQIALAERQYNIAHE-KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 +L +Q E++ +A E + +L P ++L + G L +A +A+ Sbjct: 151 HLGTIQA--LEKKTELAIETYYKGLLLDPNHPFL-HFNLANIFYKQGKLTAALESYLEAV 207 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P + + Y+ + A+ + E ++N L + KG Sbjct: 208 KTMPGFIEAQKNIADIYLKIGKTDLALHSYKTLIQIEGESDKNLTALGTLYA----QKGF 263 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 S ++LK+ + A++ A+ LI++ K +A LE Sbjct: 264 KKESKIYYTQALKINNKFAPAAVGIAEILIAEKKYLEALHALEVA 308 >gi|296425124|ref|XP_002842093.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638351|emb|CAZ86284.1| unnamed protein product [Tuber melanosporum] Length = 837 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 67/205 (32%), Gaps = 7/205 (3%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + GD++ A+ KA + +P+ + A V+ + + A L ++ A Sbjct: 568 LAKEKWQAGDIDGARIVLGKAFNQNPNNEDIWLAAVKLEAENTQHAAARELLATARREAG 627 Query: 220 EWNRNRAILLIAR-------SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + R +L+ G ++ + + S + + Sbjct: 628 TDRVWIKSVAFERQQGNTDAALDLEKAGVLVRARSVLDRARLAVPKSAQLWCESVRVERR 687 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 N +A+ ++ K + PH + + E + R + E V V+ Sbjct: 688 ANNISQAKTLMAKALQECPHSGLLWAESIWYLEQRTHRRPRLVEAIEKVGNDPLLYVAVA 747 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 + + +A A+ + P Sbjct: 748 RNFWVERKLPKAINWFEKAILVDPD 772 >gi|198462498|ref|XP_001352454.2| GA15373 [Drosophila pseudoobscura pseudoobscura] gi|198150850|gb|EAL29950.2| GA15373 [Drosophila pseudoobscura pseudoobscura] Length = 1193 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 95/296 (32%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S++ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E + +E+ + +++I LE + + A A KI K + + A+I Sbjct: 399 THLKKVTEQFPDDIEAWIELAQI-LEQNDLAASLAAYGTASKILKDKAKYEIPAEI 453 >gi|296161531|ref|ZP_06844336.1| Tetratricopeptide TPR_4 [Burkholderia sp. Ch1-1] gi|295888175|gb|EFG67988.1| Tetratricopeptide TPR_4 [Burkholderia sp. Ch1-1] Length = 613 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 102/325 (31%), Gaps = 54/325 (16%) Query: 108 SYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--L 160 + Q + L +L ++AL Q A++ + + A + + Sbjct: 67 ASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEI 126 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + D +A + +P++ + VL+ A L ++ Sbjct: 127 ALAAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGRPDDAEQILARELARVPA 183 Query: 221 WNRNRAILLI--------------------------------ARSLENADKGDMIASYHD 248 NR AIL + A + + D + Sbjct: 184 DNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDMNRPEAQLALARQQLVSDDAPGARKS 243 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSE 305 ++L L + + A++ ++ ++++ LEK + NP H +A +L S+ Sbjct: 244 LEQALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASD 301 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---E 359 K+ + N + L+ ++ I ++ + ++A + P + Sbjct: 302 RLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPGQ 361 Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384 ++ LAQ+ N W Sbjct: 362 AYIYLAQL-SLEQKNDAAASDWLNK 385 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 85/253 (33%), Gaps = 30/253 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY----- 176 L Q+ LA + + A ++ E+M + A + +L + + N AQ Y Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYA 348 Query: 177 --ATKALDISPDAPWVTEAVVQQY----VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A K P ++ A + A +W I+ ++ I Sbjct: 349 QQAEKTPGADPGQAYIYLAQLSLEQKNDAAASDWLNKIS----------PSSQQYVPAQI 398 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIW 287 R+ A +G + + + + ++ A A L + +AE L++ Sbjct: 399 TRAQLLAKQGKADDARK--LLANLSAPDPRDQALIARTDAAILFDARRYPEAETRLQQAT 456 Query: 288 KVNP-HPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVS-KIALEMGSIDQ 343 P P++ Y + + + +L + ++ ++ + +A + + Sbjct: 457 AQFPDDPDLTYDYAMSAEKTGHYDVMEAQLRKLIQTQPDNPQAYNALGYSLADRNQRLAE 516 Query: 344 AHAKAMLAMKIAP 356 A A +AP Sbjct: 517 ADKLVEKASSLAP 529 >gi|167824071|ref|ZP_02455542.1| hypothetical protein Bpseu9_10360 [Burkholderia pseudomallei 9] Length = 1240 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 73/198 (36%), Gaps = 14/198 (7%) Query: 195 VQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++Q + + A + + ++ + + +L + + + A+ Sbjct: 563 IEQALGNSQLDEARGLITGYLAQHADSPKAQCHAGVLELLSA-------NPDAARAYLDR 615 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +++L + +A A + + +R+ ++I + H N+ + L Sbjct: 616 AIRLRPDYAVAYSNRAATRKEGDAEREGDIIRSIACDPSFHAGWLNLARIRRPHDAALAL 675 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQ 369 + A R ++ + +++++ +++AL+ G D+A ++ + P L+ + Sbjct: 676 QCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPESYANLIPALAA 735 Query: 370 ANSHNTDKILYWTQSALH 387 + Q AL Sbjct: 736 LERRDDAIAA--LQRALE 751 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 15/208 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + A +A+ ++PD + + ++ A++ + ++ + + Sbjct: 666 RRPHDAALALQCARRAVQLAPDDADAVLLRAELALDTGDFDEALSQFERLREQRPDAPES 725 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ A + + D IA+ A+E A + + + KA + + Sbjct: 726 YANLIPALAA-LERRDDAIAALQRALELNSKHPG---ALNNGVQFYLRTQQYDKAMELAQ 781 Query: 285 KIWKVNPHPEIANI-------YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + V H E+A+ Y +L + + R EI + E+L + + Sbjct: 782 R--YVGAHGELASAHTMCGLVYHNLKAYDRAE--ASLRRALEIEPHNAEALFALGTVLER 837 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ A+ I + + LA Sbjct: 838 VDRLAESEEVLRRALTIRRDYRVLVNLA 865 >gi|46202065|ref|ZP_00053827.2| COG3914: Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Magnetospirillum magnetotacticum MS-1] Length = 722 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 7/127 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A +AL PD + + A + + Sbjct: 146 KRESDAEKAM---REALRCKPDLVPAHMGLGEFLAAMGRHDDAAAHFRRAVEIQPA---- 198 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A A E + A+ +L + + + A + + + + +A +LE Sbjct: 199 NADAACALGAELQAAFRIEAATEAYRHALAVDPDLVAALVGLGRVHLEAGRDHEAVPLLE 258 Query: 285 KIWKVNP 291 + ++++P Sbjct: 259 RAYRLSP 265 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 13/228 (5%) Query: 152 TREFAV-YSLYFE--SCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 TR +L + R + + A + P + A+ + A Sbjct: 58 TRFAGHARALSVLGPALRNLKKYDEAVECGKATVAAVPQFAPAHAELGAALAGAERYEEA 117 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + A ++ A A+ + E+L+ + + A + Sbjct: 118 LGCYERALALAPDF----AEAWCAKGRVLFALKRESDAEKAMREALRCKPDLVPAHMGLG 173 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KE 323 + L + + A + ++ P A +++ A + Sbjct: 174 EFLAAMGRHDDAAAHFRRAVEIQPANADA-ACALGAELQAAFRIEAATEAYRHALAVDPD 232 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 V +LV + ++ LE G +A A +++P + L + + + Sbjct: 233 LVAALVGLGRVHLEAGRDHEAVPLLERAYRLSPDEGGILDMLVLARLQ 280 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 5/163 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L L ++ H+ A V Q + E+Q A + A E L Sbjct: 172 LGEFLAAMGRHDDAAAH-FRRAVEIQPANADAACALGAELQAAF---RIEAATEAYRHAL 227 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + A+ L G + A +A +SPD + + +V + W Sbjct: 228 AVDPDLVAALVGLGRVHLEAGRDHEAVPLLERAYRLSPDEGGILDMLVLARLQLCAWDG- 286 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + L +R +A + +A+ A Sbjct: 287 LEPLRAALLERIRADRMVVNPFVAILADADSAHQDLAARQWAR 329 Score = 36.5 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 60/220 (27%), Gaps = 21/220 (9%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-------------NRAILLIARSLEN 236 + A +RA++ L +N K+++ A Sbjct: 50 AANTRLVLTRFAGH-ARALSVLGPALRNLKKYDEAVECGKATVAAVPQFAPAHAELGAAL 108 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291 A + +L L + A + L + ++ AE + + + P Sbjct: 109 AGAERYEEALGCYERALALAPDFAEAWCAKGRVLFALKRESDAEKAMREALRCKPDLVPA 168 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 H + + + R EI + ++ + I+ A A Sbjct: 169 HMGLGEFLAAMGRHDDAA--AHFRRAVEIQPANADAACALGAELQAAFRIEAATEAYRHA 226 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + P L+ + + + + A PD Sbjct: 227 LAVDPDLVAALVGLGRVHLEAGRDHEAVPLLERAYRLSPD 266 >gi|283832922|ref|ZP_06352663.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220] gi|291071527|gb|EFE09636.1| tetratricopeptide repeat protein [Citrobacter youngae ATCC 29220] Length = 389 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 91/282 (32%), Gaps = 57/282 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL VQ +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 R+G + ++Q Y EW +AI + Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L+ DM + + NS SI + + Sbjct: 167 LVKLGKDKQRIEIAHFYCELALQQMANDDMDRAMTLLKKGAAADKNSARVSIMMGRVYML 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIA--------NIYTHL-LSENTVGKLKRALRLEEINKE 323 KA L+++ ++ E+ + Y HL ++ L+RA E N Sbjct: 227 NGDYAKAVESLQRV--ISQDKELVSETLEMLQSCYQHLGKNDEWAEFLRRA---VEENTG 281 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 + + ++++ I D A ++ P +F L+ Sbjct: 282 AA-AELMLADILEAREGSDTAQVYITRQLQRHPTMRVFHKLM 322 >gi|262197145|ref|YP_003268354.1| hypothetical protein Hoch_3962 [Haliangium ochraceum DSM 14365] gi|262080492|gb|ACY16461.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 395 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 85/266 (31%), Gaps = 18/266 (6%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 ++ A + + + ++ E L + A L ++I T Sbjct: 54 ALTAFDEGMRWMRAAQKRKRTKPRREAL---------------DKARTALRRAVEIDGTV 98 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A ++L GD A AL ++P + + A A T Sbjct: 99 WEAWHNLGAIQFAEGDDEGATAAFGSALAVNPVHVGSLFGRAEAHRRAGRTDEARTDYEA 158 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + E + R + + + ++L+ + + ++Q Sbjct: 159 AVAQSAEDSPQRRNATARLASLLREAKRYDDAVAVIRDTLRTSGANAQVYVELGMIYMAQ 218 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI 330 + A ++L K +++P P I N Y L S +R ++ +++ Sbjct: 219 GRDDLATLVLGKAAELDPELPSIYNAYALLALSSGRAQEAFERFDYATSLDPSYLDARFN 278 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 + + L+ G +A+ + + + P Sbjct: 279 KASVLLDAGDYARANEELAVVVAQRP 304 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 84/297 (28%), Gaps = 26/297 (8%) Query: 71 MLFHMLHKRNYDK-GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 KR K +AL AR + E L +Q Sbjct: 63 RWMRAAQKRKRTKPRREALDK------------ARTALRRAVEIDGTVWEAWHNLGAIQF 110 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS----P 185 A A L + +++ R G + A+ A+ S P Sbjct: 111 AE--GDDEGATAAFGSALAVNPVHVGSLFGRAEAHRRAGRTDEARTDYEAAVAQSAEDSP 168 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 T + AK + A+ + + + A + + + +G + Sbjct: 169 QRRNATARLASLLREAKRYDDAVAVIRDTLRTSGA----NAQVYVELGMIYMAQGRDDLA 224 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++ +L A +S + ++A + ++P A + Sbjct: 225 TLVLGKAAELDPELPSIYNAYALLALSSGRAQEAFERFDYATSLDPSYLDARFNKASVLL 284 Query: 306 NTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + L E +++ V + MG DQA ++ ++ AP + Sbjct: 285 DAGDYARANEELAVVVAQRPEDMDAQVALGVALRGMGEYDQAKSQWEKVVQEAPTRS 341 >gi|238785127|ref|ZP_04629121.1| Cellulose synthase operon protein C [Yersinia bercovieri ATCC 43970] gi|238713942|gb|EEQ05960.1| Cellulose synthase operon protein C [Yersinia bercovieri ATCC 43970] Length = 1325 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 90/266 (33%), Gaps = 40/266 (15%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD--I 183 + LA A L + Q P + V +L + GD +A K + I Sbjct: 565 SAEAYLANGDSASAAAILRGLAQNPPSAPADVGNLAKDLMAAGDSTTAVSLVRKNISGGI 624 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLENADK 239 A A + + A L+ Q + E +R R I ++ E ++ Sbjct: 625 QGKAGDYA-AQIGVLTQSGLTQEAEALLSNPAIQSSSSPIEISRLRMGSAINQADELREQ 683 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G A+Y I +L+ +I + + S +A + Y Sbjct: 684 GQYAAAYDKLIVALQSDPQNIDLMLAMGRLYQSGKMNDEAGRV----------------Y 727 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 +L LKR + + + V +AL G + A ML M+ E Sbjct: 728 AYL--------LKR-------DPTNEGARVGAVNVALAKGDVQSARQ-LMLGMRGPRTPE 771 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSA 385 LL A++ +A + ++ L +SA Sbjct: 772 RLLLAARVAEAE-GDHEQALALLRSA 796 >gi|189466851|ref|ZP_03015636.1| hypothetical protein BACINT_03227 [Bacteroides intestinalis DSM 17393] gi|189435115|gb|EDV04100.1| hypothetical protein BACINT_03227 [Bacteroides intestinalis DSM 17393] Length = 274 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 80/201 (39%), Gaps = 16/201 (7%) Query: 173 AQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 A+ Y +AL + P P A++ +++ +A+ A RA+ Sbjct: 42 AENYIRQALKLEPANP--HNALLFSNLGTIQRRQRDYDQALESYTYALNIAP-----RAV 94 Query: 228 -LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L+ R+ N + G + D L L ++ A + A ++Q + A E++ Sbjct: 95 PILLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQRDLKFARADYERL 154 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL--EMGSIDQ 343 K++P A + L + K L ++ E + + + V++ + +M +D Sbjct: 155 LKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAGIEQDMQHVDL 214 Query: 344 AHAKAMLAMKIAPRKEIFLLL 364 A A+K+ P + L+ Sbjct: 215 AMIDLEEALKLNPSQTEAYLM 235 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 7/165 (4%) Query: 124 LLEVQIALAE-RQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL E + A ++L RE + Y + DL A+ + L Sbjct: 97 LLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQR-DLKFARADYERLL 155 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P + +A+ LN+ A L +AR+ D Sbjct: 156 KLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDP----QDAALYVARAGIEQDMQH 211 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + D E+LKL + A + + +SQ KK A+ EK Sbjct: 212 VDLAMIDLEEALKLNPSQTEAYLMRGQIYLSQKKKNLAKQDFEKA 256 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 63/172 (36%), Gaps = 13/172 (7%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++A ++ Q K + N + A+L + D + +L + ++ + Sbjct: 40 AQAENYIRQALK-LEPANPHNALLFSNLGTIQRRQRDYDQALESYTYALNIAPRAVPILL 98 Query: 265 CAAKSLISQNKKRKAEVI-------LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 A + + +A + LEK + + Y ++ + RL Sbjct: 99 NRAALNLEMGRNEQA-RVDYSLVLDLEKDNREA---LLMRAYIYVTQRDLKFARADYERL 154 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIE 368 +++ ++ + + ++ + + G++ +A + P +++ A IE Sbjct: 155 LKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAGIE 206 >gi|170090642|ref|XP_001876543.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648036|gb|EDR12279.1| predicted protein [Laccaria bicolor S238N-H82] Length = 918 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 98/284 (34%), Gaps = 10/284 (3%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIG 168 H +++L+ + A LE + P + + + ++ E+ G Sbjct: 578 SRAVHHCPQAEVLWLMAAKEKWLAGDVPGARRVLEQAFVANPESEQIWLAAVKLEAEN-G 636 Query: 169 DLNSAQRYATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 +L A+ +A ++ W+ AV ++ + S A+ L + ++ + + Sbjct: 637 ELGVARELLVRARTVADTERIWMKSAVFERQ--QNQLSMALETLAAALQKFPKFAKLYMV 694 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + + + +K C I A++ K KA +LEK Sbjct: 695 ----QGQILQSQNNYPGARASFSAGVKACPKEATLWILASRLEELDGKSIKARALLEKAR 750 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 VNP + + E + G + L +E S ++ S +A+ A+ Sbjct: 751 LVNPANDTLWAEAVGVEERSGGTAQAKAMLARGLQECPTSGLLWS-MAIWAEPRPMRKAR 809 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 ++ A+K + I + +K W A+ PD Sbjct: 810 SVDALKKSADNPIIICTVARLFWQERKIEKARQWFGRAVATDPD 853 >gi|158339139|ref|YP_001520316.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158309380|gb|ABW30997.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 712 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 50/325 (15%), Positives = 105/325 (32%), Gaps = 33/325 (10%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 AL + + + AR + S T E +YL A+A Q A + L+ Sbjct: 393 DALINAAIKAQSGDYAGARAVLSQAIG--TSPREARLYLARANYAIASGQTQAALQDLDR 450 Query: 146 MLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +++ E A + Y + R D A ++ ++++P+ Y+ + Sbjct: 451 VIEFDPKAEQAYWLRGAYRNASR--DAAGAISDFSRVIELNPNRLQAYLWRATLYMAQTD 508 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + AI Q + + R +GD + D + +KL ++ A Sbjct: 509 YQSAI----QDYSAIIRLDPKNVLAFSQRGSTRFIQGDQQGALKDYDQLIKLNPKNVEAY 564 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG---KLKRALRLEEI 320 A + A I K+NP A LSE+ + +L+ + Sbjct: 565 DRRAHVRRYSGNPQGALQDYRMITKINPRNSRAYEQIASLSEDQNDLEGAIAAYGQLQTL 624 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQA-------- 370 + ++ + +A A +++ P + + ++ + E+A Sbjct: 625 KPNDTSVYMSRGQLYEKQKRYVEAIADYTKMIELQPFQTSWFIMRGSAREKAGQRAGAKA 684 Query: 371 ----------NSHNTDKILYWTQSA 385 ++ W + A Sbjct: 685 DYRQVAKLYQQQGDSSSAKDWLERA 709 Score = 38.0 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 60/198 (30%), Gaps = 42/198 (21%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKKNA 218 ++ +G A A +P V +A++ + +++ A L+Q + Sbjct: 367 LKQAKSLGMTFKAHLPA-----NAPPPSPVDDALINAAIKAQSGDYAGARAVLSQAIGTS 421 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 A L +AR+ G A+ D ++ A ++ + R Sbjct: 422 P----REARLYLARANYAIASGQTQAALQDLDRVIEFDPK-------AEQAYWLRGAYRN 470 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A + G + R+ E+N +++ + + + + Sbjct: 471 ASR------------------------DAAGAISDFSRVIELNPNRLQAYLWRATLYMAQ 506 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 507 TDYQSAIQDYSAIIRLDP 524 >gi|325203452|gb|ADY98905.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] Length = 389 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ + QQ ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + + A+E+ K C Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 331 DLDPAWKADADMMRSVIARQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|239930985|ref|ZP_04687938.1| secreted protein [Streptomyces ghanaensis ATCC 14672] Length = 469 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 83/265 (31%), Gaps = 39/265 (14%) Query: 136 YNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ A + L L+ P A+ L + D A+R+ +A + P + Sbjct: 110 WSRAEKALRTSLKVRPKGNARALRGLAALANARRDYAGARRWGEEARKLEPKRWTTYPLL 169 Query: 195 VQQYVLAKEWSRAITFLNQ--KKKNAKEWN------------RNRAILLIARSLENA--- 237 ++ + A L++ ++ E R A + +A ++ A Sbjct: 170 IEACTGLGDHKAAGDMLDRLAALRSGPEVMARAAAVYRDRGWREDAAVQLADAVSAAGEP 229 Query: 238 ---------------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 ++GD + E++++ + A ++L + + +A Sbjct: 230 AERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALTA 289 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL------RLEEINKESVESLVIVSKIAL 336 P PE A L K RA R+ + +++ + Sbjct: 290 YRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLVLGRFEA 349 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIF 361 + G + A + + P E+ Sbjct: 350 DHGDAEAAVRRLRAEWERQPSTEVA 374 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 78/298 (26%), Gaps = 40/298 (13%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ------I 149 + A M ++ + + + A R + + Sbjct: 175 GLGDHKAAGDMLDRLAALRSGPE------VMARAAAVYRDRGWREDAAVQLADAVSAAGE 228 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 PA R + + GD A R +A+ I PD + + A+T Sbjct: 229 PAERAAYLEQAGQLAWERGDRQDALRQFREAVRIDPDQRAAQAGQGRALAALGRTTEALT 288 Query: 210 FLNQKK--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASIC 265 + E+ L + + + ++ + Sbjct: 289 AYRAALDGQPRPEYALELGELYESLGRRKEARAQYGLLRDRVRLAAAHGADEDLV----- 343 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKES 324 + A L W+ P E+A+ + + R+ L + + Sbjct: 344 LGRFEADHGDAEAAVRRLRAEWERQPSTEVADAL-----GWALHRAGRSEEALPFALRAT 398 Query: 325 VESLVIVSKIAL----------EMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQ 369 E + AL E+G A A++I P + L A +E+ Sbjct: 399 DEGRGGGVRSALYVFHRGMIEREVGRDGAARRHLRQALQINPYFSPLRVPLAKAALER 456 >gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424] gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 361 Score = 49.2 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 82/243 (33%), Gaps = 28/243 (11%) Query: 160 LYFE---SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L+ + + G+ ++A + T+ + ++P+ P + AI + + Sbjct: 49 LFNQGVAKIKAGNFSAAIKDFTEVIRLNPNLPEAYNNRGNARSKLGDNKGAIE--DYNQA 106 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +A ++ GD + D ++L L NS A++ ++ Sbjct: 107 INLNPKSEQAYYNRGKARSEL--GDNKGAIEDYNQALNLNPNS-------AEAYNNRGIS 157 Query: 277 RK-------AEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKES 324 R A L + ++N P++A Y++ + +T G K ++ S Sbjct: 158 RHELKDHVGAMQDLNQAIRLN--PKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNS 215 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 E+ +G +A A+ + P+ + + + + + Sbjct: 216 AEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRREFGDHAGAIQDLNQ 275 Query: 385 ALH 387 AL Sbjct: 276 ALR 278 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 4/93 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+GD A + +A+ + P + + AI LNQ + ++ Sbjct: 228 RVGDYQKAFQDFNQAIGLDPQLGLAYNNRGVMRREFGDHAGAIQDLNQALR----FDPKL 283 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A R + + G+ + D ++++L + Sbjct: 284 AKAYNNRGDTHRELGNHREAIQDYDQAVRLIPD 316 >gi|209519646|ref|ZP_03268436.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160] gi|209499932|gb|EDZ99997.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. H160] Length = 613 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 46/325 (14%), Positives = 106/325 (32%), Gaps = 54/325 (16%) Query: 113 QHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESC 165 + + + L +L +IAL Q A++ + + A + + + Sbjct: 72 EKSLPHVPLSSQIVFQVLAAEIALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQ 131 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 D +A + +P + + VL+ + A L+Q+ + NR Sbjct: 132 SPSDALAAAQLWQ---QYAPSSERAAQLDASLLVLSGKPDDASPILSQELAKIPDENRGS 188 Query: 226 AILL--------------------------------IARSLENADKGDMIASYHDAIESL 253 A+L +A + + D + ++L Sbjct: 189 AVLALQLLLSHGPNRVGGLHVLQDLLKNDMNRPEAQLAIARQQLLADDAPGARKSLEQAL 248 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENTVGK 310 + + + A++ ++ ++++A LEK + NP H +A +L S+ Sbjct: 249 TIKPDYLPAALMLSQMGPE--ERKEAIATLEKYVQQNPKSHDARLALAQMYLASDRLDDA 306 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---EIFLLL 364 K+ + + N + L+ ++ I ++ + +A + P + ++ L Sbjct: 307 QKQFEIMRKANSNDLTPLMALALIKIQQKNFAEAQTYLTQYAQQAEKTPGADAGQAYIYL 366 Query: 365 AQIEQANSHNTDKILYWTQSALHAM 389 AQ+ N W A Sbjct: 367 AQL-SLEQKNEAAASDWLNKISPAS 390 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 85/253 (33%), Gaps = 30/253 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ----RYA 177 L Q+ LA + + A ++ E+M + + + +L + + AQ +YA Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMRKANSNDLTPLMALALIKIQQKNFAEAQTYLTQYA 348 Query: 178 TKALDISPDAPWVTEAVVQQ---------YVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 +A + +P A +A + A +W I+ ++ Sbjct: 349 QQA-EKTPGAD-AGQAYIYLAQLSLEQKNEAAASDWLNKIS----------PASQQYMAA 396 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIW 287 I R+ A +G + + + + A L + +AE L++ Sbjct: 397 QITRAQLLAKRGKTDEARQLLANLQTSDPRDVALVTRTDAAILFDAKRYSEAEERLQQAT 456 Query: 288 KVNP-HPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVS-KIALEMGSIDQ 343 P P++ Y + + + +L + ++ ++ + +A + + Sbjct: 457 ANFPDDPDLTYDYAMAAEKTGHYDVMEAQLRKLIQTQPDNPQAYNALGYSLADRNQRLPE 516 Query: 344 AHAKAMLAMKIAP 356 A A +AP Sbjct: 517 ADQLVEKASSLAP 529 >gi|327478940|gb|AEA82250.1| cellulose synthase subunit BcsC [Pseudomonas stutzeri DSM 4166] Length = 1164 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 89/322 (27%), Gaps = 59/322 (18%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + AL ++ A + Y + L Q+A AE + + A Sbjct: 353 WLALEQADQALEQQRPREAAAL--YTRALRQQPDSLFAALGLAQVAEAEGRTDEAEAAYR 410 Query: 145 MMLQIPATREFAVYSLYF------------------------------------------ 162 +L A+ L Sbjct: 411 RLLARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLARYQLQAD 470 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ GD +A +A + P+ PW+T + + A + + Sbjct: 471 QALERGDQAAASEALRQARRLDPNDPWLTYRLANSLRTQGAFYEADSTFDDLLARKPADP 530 Query: 223 RNRAILLIARSLENADKGDMIASYH----DAIESLKLCDNSIMASICAAKS--LISQNKK 276 R + + D + + D + ++ + ++ L + ++ Sbjct: 531 TTRYAHALYLAAAERDTQALTSLRQVPASDWNDDIRALATRVERREFMSRVAKLRAAGRE 590 Query: 277 RKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A ++++ ++ H + + + E + A L I+ E + + Sbjct: 591 TAAADLMQQ--RLRSHGDSVDDLLLLADWAVERGEPAAAQSYLARAL-RIDPEHAAARLA 647 Query: 331 VSKIALEMGSIDQAHAKAMLAM 352 ++ L G +++A A Sbjct: 648 QIELLLAAGQVNEASQALHDAP 669 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 84/274 (30%), Gaps = 40/274 (14%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 E+ + +L P R L G +A+ +AL P P + Sbjct: 252 AGDARQHLERQQRLLADPLWR-AGQEGLRL--LDQGQDEAAEAKLRQALRGYPKDPELLG 308 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWN----------RNRAILLIARSLENADKGDM 242 + + A+ + + K N + + R L + ++ + ++ Sbjct: 309 GLGLALMRPGHRPEALVYFQRAKDNEADIDNLSKWSDLIDSTRYWLALEQADQALEQQRP 368 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + +L+ +S+ A++ A+ ++ + +AE Y L Sbjct: 369 REAAALYTRALRQQPDSLFAALGLAQVAEAEGRTDEAE----------------AAYRRL 412 Query: 303 LSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L+ + G ++ +RL I + A + ++ +LA Sbjct: 413 LARDPANGGAIRGLVRLYRAESAERALAFIETLAAPQRQEFNELRNALLLA--------R 464 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 + L A + + + A P+ W Sbjct: 465 YQLQAD-QALERGDQAAASEALRQARRLDPNDPW 497 Score = 36.8 bits (84), Expect = 9.2, Method: Composition-based stats. Identities = 38/327 (11%), Positives = 92/327 (28%), Gaps = 48/327 (14%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R + +AL G + A+ + AR++ ++ +L Y L + + Sbjct: 463 ARYQLQADQALERGDQAAASEALRQARRLD--------PNDPWLTYRL-ANSLRTQGAFY 513 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQ 196 A + +L + + ++ A +L P + W + + Sbjct: 514 EADSTFDDLLARKPADPT-TRYAHALYLAAAERDTQ---ALTSLRQVPASDWNDDIRALA 569 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKGDMIASYH 247 V +E+ + L + + + L L+ + ++G+ A+ Sbjct: 570 TRVERREFMSRVAKLRAAGRETAAADLMQQRLRSHGDSVDDLLLLADWAVERGEPAAAQS 629 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 +L++ A + + L++ + +A L + + Sbjct: 630 YLARALRIDPEHAAARLAQIELLLAAGQVNEASQALHDA----------------PPQFS 673 Query: 308 VGKLKRALRLEEINKESVESLVIVS-------KIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + RL N + V + + +E A L + P + + Sbjct: 674 NDESNAIRRLA--NSWAAVGEVAKARQMLEQLEAQVEAPDPLLRRDTARLLARTEPDRAM 731 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALH 387 + A A Sbjct: 732 AYYRKAMVDAELVPEGASDADLTQATR 758 >gi|326578043|gb|EGE27907.1| tetratricopeptide TPR_2 [Moraxella catarrhalis O35E] Length = 669 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 8/183 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + + RA+ E + A + R+L + S A Sbjct: 155 EFAADRGDIRRALNI------YKAESFKKNATNVFERALSLSIEYETPAQSLAFATAWQD 208 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + I A + + +A ++ I +P ++ I T ++ K Sbjct: 209 RNPDHIPAWFYVTHLALKAGEYNQAAAMISTILHYDPRSDLGQILTGIIPPKREDKRALL 268 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSH 373 L+ + + + V+ + I + + A A+ I P F L I +A + Sbjct: 269 YALQGLGENNASISVLRAGILMGLADYQAARLHVNQALSIEPNNLAFITLKLDILRAANQ 328 Query: 374 NTD 376 + Sbjct: 329 LDE 331 >gi|195028406|ref|XP_001987067.1| GH21711 [Drosophila grimshawi] gi|193903067|gb|EDW01934.1| GH21711 [Drosophila grimshawi] Length = 1053 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 98/300 (32%), Gaps = 25/300 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + GY L L++ ++ A + + Q L Sbjct: 130 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMEAAVQAYITALQYNPDLYCVRSDLG 187 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 188 NLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 242 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 243 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 298 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYTH 301 + +++L N A A +L + + ++AE ++ + H + N + Sbjct: 299 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAEDCYNTALRLCSNHADSLNNLAN 358 Query: 302 LLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E +L LE + + ++ + + G + +A A++I P Sbjct: 359 IKREQGFIEEATRLY-LKALEVF-PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT 416 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P+ P + Sbjct: 265 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 324 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + N A L + ++G + + +++L++ Sbjct: 325 ALKEKGQVKEAEDCYNTALR----LCSNHADSLNNLANIKREQGFIEEATRLYLKALEVF 380 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 + A A L Q K ++A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 381 PDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPT--FADAYSNMGNTLKELQDVSGAL 438 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 439 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAILSYRTALKLKPD 484 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + + H + L L I + A L++ A Sbjct: 330 GQVKEAEDCYNTALRLCSNHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPDFAAAH 387 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I P + ++ S A+ + + Sbjct: 388 SNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNTLKELQDVSGALQCYTRAIQI 447 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 448 NPAF----ADAHSNLASIHKDSGNIPEAILSYRTALKLKPDFPDAYCNLAHCL 496 >gi|58584117|ref|YP_203133.1| hypothetical protein XOO4494 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428711|gb|AAW77748.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 690 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + +PD + + A+ ++ E Sbjct: 6 LQALRRNAADDAVALAREWATAAPDDVAAHRWLAVALQQQGQPGLALGSIDTALMLTPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ + L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + + L R E + L + L+ Sbjct: 122 LSRTAARLVPEHPQLLAVDGVVEMRRSQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 182 EHFAFAERAFERVIELNP 199 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 14/280 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + ++LL LA R + A L + + A + GDL Sbjct: 57 TALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDL 116 Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A+R + A + P+ P + VV+ + RA++ L + + + A + Sbjct: 117 DEAERLSRTAARLVPEHPQLLAVDGVVEMRRSQSD--RALSLLTRAAEQLPD----DARV 170 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284 L + K + ++L A+ Q + A +LE Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P L + +L + + +G++D A Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWVRLGAVDDA 290 Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 A+ + L LA I W Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330 >gi|297568709|ref|YP_003690053.1| Methyltransferase type 12 [Desulfurivibrio alkaliphilus AHT2] gi|296924624|gb|ADH85434.1| Methyltransferase type 12 [Desulfurivibrio alkaliphilus AHT2] Length = 469 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 53/169 (31%), Gaps = 4/169 (2%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL A + + A + +L+ A +L G+ + +R + Sbjct: 14 KLLAAAEAQEQGDFQRAKDLYRDILKNCPDHLDARVALCLLYQVAGEADKGRRCFAETRR 73 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P + + E AI F Q E +R L AR +G+ Sbjct: 74 LAPPHADLHLQLGTLCHDRGEDELAIDFYRQALALKPEHHRAWYNLGTAR----LQRGEE 129 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + E+L L N + A +L K A I + P Sbjct: 130 ALAVEAYQEALHLAPNDVDTLYNLALALTRLEKFSAAAHIYHRALAAAP 178 >gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT 9303] gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT 9303] Length = 462 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 15/231 (6%) Query: 133 ERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 Y A +++ + ++ D A KA++I+P Sbjct: 160 SGDYQGAIADYNKSIEVNPQYADAYNNRG--RAKYKLKDTQGAIDDFNKAIEINPQLAIA 217 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 K++ AI+ N+ + A R + D + D Sbjct: 218 YSNRGNAKDELKDYQGAISDFNKAIEIIP----QDAAAYYNRGNAKDELKDYQGAISDFN 273 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSE 305 +++++ A ++A K ++N P++A Y S Sbjct: 274 KAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEIN--PQLAIAYSNRGIVKRESG 331 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +T + R EIN E + +G+ +A A A++I P Sbjct: 332 DTQEAIADFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADYNKAIEINP 382 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 6/166 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y A ++I A Y+ GD A KA++I+P Sbjct: 263 KDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLAIAYSN 322 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI N+ + E+ A R + + G+ + D +++ Sbjct: 323 RGIVKRESGDTQEAIADFNRAIEINPEY----AAAYNNRGIAKKNLGNYQEAIADYNKAI 378 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 ++ A + + A L K ++N P+ A Y Sbjct: 379 EINPQYAAAYYNRGIAKYKLKDTQGAIAELNKAIEIN--PQYAAAY 422 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 76/237 (32%), Gaps = 17/237 (7%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + GD A KA++I+P + + AI N+ + Sbjct: 85 RGLA--KRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEI 142 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ A R GD + D +S+++ A ++ + Sbjct: 143 NPQY----ADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQ 198 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-------RALRLEEINKESVESLVI 330 A K ++N P++A Y++ N +LK + EI + + Sbjct: 199 GAIDDFNKAIEIN--PQLAIAYSN--RGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYN 254 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 E+ A + A++I P+ I + S +T + + A+ Sbjct: 255 RGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIE 311 >gi|82702040|ref|YP_411606.1| tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196] gi|82410105|gb|ABB74214.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196] Length = 875 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 86/293 (29%), Gaps = 16/293 (5%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALA---ERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + + L +Q A+ + A + +LQ+ A++ L Sbjct: 24 RNAEANPAASLADTSPRQSILQYLQAAVEHHKRGNLSQAEAIYQHILQLDPNHPDALHFL 83 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + G ++ +AL P+ + + + AI K Sbjct: 84 GLLARDAGRIDIGIELIKRALRFKPNYVEAHNNLGNTLRQQGKLNDAIASYRTAVKLEPR 143 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + A + +L ++G + + + ++L + Q A Sbjct: 144 F--AEAYGNLGNAL--REQGRLDDAMINYRKALGIQPQLAEMHCNIGIVHREQGDLENAV 199 Query: 281 VILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 K + P+ A + +L + + + E+ + Sbjct: 200 SSFRKALLLK--PDSAEAFNNLGNVLVEQGKFEEAVSSFGKAILYKPQFPEAFNNLGNAL 257 Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS-HNTDKILYWTQSAL 386 E+G +D+A A+++ P + A + + I YW L Sbjct: 258 RELGRLDEAAVAYGRAIELNPGYARAYSNRAYVLWQQHKADNAVIDYWDALEL 310 >gi|289669851|ref|ZP_06490926.1| hypothetical protein XcampmN_15482 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 268 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + +PD + + +RA+ ++ E Sbjct: 6 LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPARALDSIDTALMLTPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ + L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + + L R E + L + L+ Sbjct: 122 LSRTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 182 EHFAFAERAFERVIELNP 199 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 8/182 (4%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 AR + S + + ++LL LA R + A L + + A Sbjct: 46 GQPARALDSIDTALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVM 105 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + GDL+ A+R + A ++P+ P + VV+ + RA++ L + + Sbjct: 106 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLALDGVVEMRRGQSD--RALSLLTRAAEQ 163 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A +L + K + ++L I A+ Q + Sbjct: 164 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGIALRAFIAQLAQRQGRLD 219 Query: 278 KA 279 A Sbjct: 220 DA 221 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 7/163 (4%) Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291 L+ + + A E + + A A +L Q + +A ++ + P Sbjct: 6 LQALRRNAADDAVALAREWATTAPDDVAAHRWLAVALQQQGQPARALDSIDTALMLTPED 65 Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 H A + R ++ + V+ + +A+ G +D+A + Sbjct: 66 ADLHLLRAGALLATRDLSAAD--AALSRTTALDPNQFNAYVMQAHLAVARGDLDEAERLS 123 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A ++AP L L + + +D+ L A +PD Sbjct: 124 RTAARLAPEHPQLLALDGVVEMRRGQSDRALSLLTRAAEQLPD 166 >gi|73992767|ref|XP_534481.2| PREDICTED: similar to U5 snRNP-associated 102 kDa protein [Canis familiaris] Length = 1000 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 638 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 695 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 696 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQE 755 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + + M + + LK C +S + ++ Sbjct: 756 LCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKV 815 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S V+ Sbjct: 816 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGVLW 873 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 874 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 931 Query: 391 D 391 D Sbjct: 932 D 932 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 347 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 403 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 404 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 455 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 456 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 508 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 509 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 554 >gi|322421648|ref|YP_004200871.1| glycosyl transferase family 9 [Geobacter sp. M18] gi|320128035|gb|ADW15595.1| glycosyl transferase family 9 [Geobacter sp. M18] Length = 991 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 62/234 (26%), Gaps = 37/234 (15%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSA 173 ++ + E E A +L P + E +L G A Sbjct: 516 AAQDDPNLLFREANRLRVEGDLAGAVRLYRTLLIRLPESAEV-HNNLGLALQDQGLAADA 574 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + +AL++ P + V E A + + A + A + + Sbjct: 575 EASFRRALELKPGLADAYNNLGTLLVSRGEHEAAEPQFRRAIELAPDC--LPAYVNLGSC 632 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L+ ++ + ++ L + A+ Sbjct: 633 LQVLEE--PAQAVELYRHAIDLNPD-----YLEARI------------------------ 661 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 + Y L+ ++ L + E E ++ L +G ++ + Sbjct: 662 NLGTAYQDLMQ--PQKAIETYEELLRLAPEHPEGHWNLALSLLSVGEFERGWRE 713 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 8/148 (5%) Query: 130 ALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 AL E + A E + +LQ + + + + G+L A ++A+ + P Sbjct: 11 ALEENRVERARELCQALLQSEPDSVDLLTLSGVL--ARLTGELEVALHSLSRAVALDPSQ 68 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + A + + K + A+ + +L G + Sbjct: 69 AELHNNLGVILEDLGRHEEAAACYRRALEKRKLYP--EALGNLGNALLKL--GHPQEAIA 124 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNK 275 +++ L A +L Q + Sbjct: 125 RFCDAIALDPGYTNAYYHLGHALRGQGE 152 Score = 36.8 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 66/216 (30%), Gaps = 49/216 (22%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA------------KEWNRNR------ 225 PD+PW + + EW I + ++ +E NR R Sbjct: 479 RPDSPWYPSVRLHRQEATGEWEPVIAAIAREIVPPSGAAQDDPNLLFREANRLRVEGDLA 538 Query: 226 ----------------AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 A + L D+G + +L+L A Sbjct: 539 GAVRLYRTLLIRLPESAEVHNNLGLALQDQGLAADAEASFRRALELKPGLADAYNNLGTL 598 Query: 270 LISQNKKRKAE----VILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEI 320 L+S+ + AE +E P+ Y +L S E ++ ++ Sbjct: 599 LVSRGEHEAAEPQFRRAIELA------PDCLPAYVNLGSCLQVLEEPAQAVELYRHAIDL 652 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 N + +E+ + + ++ +A +++AP Sbjct: 653 NPDYLEARINLGTAYQDLMQPQKAIETYEELLRLAP 688 >gi|188997334|ref|YP_001931585.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932401|gb|ACD67031.1| PDZ/DHR/GLGF domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 668 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 31/230 (13%) Query: 165 CRIGDLNSAQRYATKALDIS-----------------PDAPWVTEAVVQQYVLAKEWSRA 207 I D + A A S P + Y L E+ +A Sbjct: 104 LAIKDYDKAIHLLEIAAKESKENPSEPLWQGFYSRFVPKKSEALSLLGSAYYLKGEYQKA 163 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + LN+ K + N + +A S + + A +++L + Sbjct: 164 VEALNESIK--LDPNLSDPFFFLAMSYGKLKE--YGKAVEAAKRAIELDPKAPTYYAVLG 219 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322 Q K ++AE L+K +++P +A++Y E+ + ++ EIN Sbjct: 220 LIYKDQKKYKEAEENLKKSIELDPKSIVSYLKLADLYYE--KESYKEAVNTLTKVLEINP 277 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 ++E+ + + MG D+A A A+K + +I++A Sbjct: 278 SNMEANYSLIYTYMAMGQFDKAIESANKAIK-HNTITEAGI--RIKKAEG 324 >gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A] gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A] Length = 400 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 105/291 (36%), Gaps = 28/291 (9%) Query: 118 NEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + +YLL + A E ++ A + + ++I + ++ F ++G+ A Sbjct: 83 DPKNIYLLNNKAAALESFGRFEEALKLYQKAVEINSEDADLWNNMAFSYSQVGEYERAVE 142 Query: 176 YATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 KAL++ PD P W +A+ A + A+ + + + ++ A + Sbjct: 143 AYGKALELRPDYPNAWYGKAL--NLSQAGSYEEAVEAYEKVLEESPDYKEAWA----GKG 196 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + G + +++++ + A L S R+A EK +++P Sbjct: 197 IALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELDPEN 256 Query: 294 EIA--NIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + A N+ L + E + + IN E+ + +M ++A Sbjct: 257 DDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYRK 316 Query: 351 AMKIAP-----RKEIFLLLAQI----------EQANSHNTDKILYWTQSAL 386 A ++ P + +LAQ+ E+A + W A+ Sbjct: 317 ATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGAADSWFGKAV 367 >gi|84625891|ref|YP_453263.1| hypothetical protein XOO_4234 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188574553|ref|YP_001911482.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae PXO99A] gi|84369831|dbj|BAE70989.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519005|gb|ACD56950.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 690 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + +PD + + A+ ++ E Sbjct: 6 LQALRRNAADDAVALAREWATAAPDDVAAHRWLAVALQQQGQPGLALGSIDTALMLTPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ + L N A + A +++ +AE Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + + L R E + L + L+ Sbjct: 122 LSRTAARLVPEHPQLLAVDGVVEMRRSQSDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 182 EHFAFAERAFERVIELNP 199 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 14/280 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + ++LL LA R + A L + + A + GDL Sbjct: 57 TALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDL 116 Query: 171 NSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A+R + A + P+ P + VV+ + RA++ L + + + A + Sbjct: 117 DEAERLSRTAARLVPEHPQLLAVDGVVEMRRSQSD--RALSLLTRAAEQLPD----DARV 170 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV----ILE 284 L + K + ++L A+ Q + A +LE Sbjct: 171 LFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAMQGVLE 230 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P L + +L + + +G++D A Sbjct: 231 QPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWVRLGAVDDA 290 Query: 345 HAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 A+ + L LA I W Sbjct: 291 RDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 330 >gi|166710157|ref|ZP_02241364.1| hypothetical protein Xoryp_01410 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 695 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 60/203 (29%), Gaps = 12/203 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + PD + + A+ ++ E Sbjct: 6 LQALRRNAADDAVALAREWATAVPDDVAAHRWLAVALQQQGQPGLALDSIDTALMLTPE- 64 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ + L N A + A +++ +A Sbjct: 65 ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAAR 121 Query: 282 ILEKIWKVNP------HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 + ++ P HP++ + + + L R E + L + Sbjct: 122 LSRTAARLAPEHPQLEHPQLLAVDGVVEMRRGQSDRALSLLTRAAEQLPDDARVLFSLGF 181 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 L+ A +++ P Sbjct: 182 AYLQKEHFAFAERAFERVIELNP 204 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 80/285 (28%), Gaps = 19/285 (6%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + ++LL LA R + A L + + A + GDL Sbjct: 57 TALMLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDL 116 Query: 171 NSAQRYATKALDISPDAPW-------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + A R + A ++P+ P + VV+ + RA++ L + + + Sbjct: 117 DEAARLSRTAARLAPEHPQLEHPQLLAVDGVVEMRRGQSD--RALSLLTRAAEQLPD--- 171 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-- 281 A +L + K + ++L A+ Q + A Sbjct: 172 -DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDDALAAM 230 Query: 282 --ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +LE+ P L + +L + +G Sbjct: 231 QGVLEQPGGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLG 290 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 ++D A A+ + L LA I W Sbjct: 291 AVDDARDTLDAALATSATAHDLWLARLAVEPVGGLQAQAVIERWL 335 >gi|108761475|ref|YP_630180.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108465355|gb|ABF90540.1| MJ0042 family finger-like domain/tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1628 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 12/235 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 ALAE +A ++ E +++ A L + DL +A+ A +AL++ P Sbjct: 1283 ALAENNTLLAQQEFERSVKLDPILADAHLGLSRVALLTDDLETAKAEANRALELDPHL-- 1340 Query: 190 VTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + +Q+ + A+ L + K R+ I + ++ ++GD+ + Sbjct: 1341 LKDGRLQRGLVLWRLGQLEEAVAELEKAKAEDP---RSTTIPITLGAV-LLERGDLPGAE 1396 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSE 305 + +L ++ A A + + +A + K + P+ P+ Y +L + Sbjct: 1397 SNLGLALSNEPSNHEALYYLALVKARRLEFTQALDNMRKAVERAPNRPDYHYAYGVILRD 1456 Query: 306 --NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 N + + E++ ++ + LE G D+A A ++K PR+ Sbjct: 1457 AKNLPDAMSAWRKTVELDGSHADAHEALGHALLEGGQFDEAIASFEASLKADPRR 1511 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 89/283 (31%), Gaps = 31/283 (10%) Query: 82 DKGYKALYTGL---MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 KG +A+ L + A LAR H E + L Sbjct: 1079 AKGTEAVERALAEDVQSALGPAELARARGLKGVAMFQKHQPK-----EAEAELKAALEMD 1133 Query: 139 AHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A + L + A P+ + + Sbjct: 1134 AKSTF-------------LRGQLARVLRAQRNFEGALPIYKALATEEPNNLEFADGHITA 1180 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMIASYHDAIESLKLC 256 V+ + A+ + KK N N R L R + D D Y AI + Sbjct: 1181 LVMTGKMQDALEAV--KKANGVFPNEARIAYLYGRIEDALDNLSDTEGHYKRAIAA---D 1235 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKR 313 D + A + + ++Q + +A LE+ K P L NT+ + Sbjct: 1236 DTLVEARLYLGRFYLAQRRNAEARPQLEEAAKKAPENAGVRAGLGELALAENNTLLAQQE 1295 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 R +++ ++ + +S++AL ++ A A+A A+++ P Sbjct: 1296 FERSVKLDPILADAHLGLSRVALLTDDLETAKAEANRALELDP 1338 Score = 36.8 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 59/195 (30%), Gaps = 12/195 (6%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEM 145 + G + + ++P A ++E L YL ++ + + + + +E Sbjct: 1380 ITLGAVLLERGDLPGAESNLGLALSNEPSNHEALYYLALVKARRLEFTQALDNMRKAVER 1439 Query: 146 MLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 P Y + ++ + D SA K +++ EA+ + ++ Sbjct: 1440 APNRPDYHYA--YGVILRDAKNLPDAMSAW---RKTVELDGSHADAHEALGHALLEGGQF 1494 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 AI K R +L + + +LK Sbjct: 1495 DEAIASFEASLKADPRRTR----VLGSIGDAYFAAARWNDAIKRYQSALKADPKLTYVYY 1550 Query: 265 CAAKSLISQNKKRKA 279 A++ Q + KA Sbjct: 1551 KVARAFTEQAQHAKA 1565 >gi|311279809|ref|YP_003942040.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter cloacae SCF1] gi|308749004|gb|ADO48756.1| Tetratricopeptide TPR_1 repeat-containing protein [Enterobacter cloacae SCF1] Length = 389 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 95/280 (33%), Gaps = 53/280 (18%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + ++ T Sbjct: 83 GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLV--DETDF- 139 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 RIG + ++Q Y +W +AI + Sbjct: 140 ----------RIG---------------------ALQQLLQIYQATSDWQKAIEVAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE +R A +L+ DM + + NS SI + L++Q Sbjct: 169 KLGKEKHRPEIAHFWCELALQQMGNNDMDKAISLLKKGAAADRNSARISIMMGRVLMAQG 228 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKESV 325 + KA L+++ + E+ + + ++ L+RA E N + Sbjct: 229 EYDKAVESLQRV--IEQDRELVSETLEMLQTCYQQLGKNDEWAAFLRRA---VEENTGAT 283 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 + +++++I + ++ A ++ P +F L+ Sbjct: 284 -AELMLAQILEQQEGVESAQTYVTRQLQRHPTMRVFHKLM 322 >gi|195170683|ref|XP_002026141.1| GL16176 [Drosophila persimilis] gi|194111021|gb|EDW33064.1| GL16176 [Drosophila persimilis] Length = 1180 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 95/296 (32%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S++ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQSKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E + +E+ + +++I LE + + A A KI K + + A+I Sbjct: 399 THLKKVTEQFPDDIEAWIELAQI-LEQNDLAASLAAYGTASKILKDKAKYEIPAEI 453 >gi|124024110|ref|YP_001018417.1| hypothetical protein P9303_24191 [Prochlorococcus marinus str. MIT 9303] gi|123964396|gb|ABM79152.1| Hypothetical protein P9303_24191 [Prochlorococcus marinus str. MIT 9303] Length = 545 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 56/184 (30%), Gaps = 16/184 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR 153 + A ++ ++ + L +I Q+ A + L+ P T Sbjct: 48 GQLQQAVELIQASIREDESNPIPFFNL--GKILAIAGQHENAVGVFQESLKRNQQIPETW 105 Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + R G A+R AL ++P + E A L Sbjct: 106 FC-----FANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR 160 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + E L+ + ++G+ + +++++ + + A + L Sbjct: 161 RALASNPE----DINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKD 216 Query: 273 QNKK 276 + Sbjct: 217 VGRM 220 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 5/164 (3%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q R + A + +L + A++ L G L A ++ Sbjct: 9 QAYQ-GRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESN 67 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P + + +A + A+ + K ++ A +L + G + Sbjct: 68 PIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIP--ETWFCFANAL--REIGKTEEAKR 123 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L+L A+ L + +AE +L + NP Sbjct: 124 AYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNP 167 >gi|330899588|gb|EGH31007.1| peptidase aspartic, active site [Pseudomonas syringae pv. japonica str. M301072PT] Length = 654 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 99/335 (29%), Gaps = 52/335 (15%) Query: 77 HKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQ---QHTFHNEYLVY---LLE 126 +K GY L + A H+ ARK + + E L L E Sbjct: 91 YKTRPKPGYLEGNQALRAYARHDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDE 150 Query: 127 VQIALAERQYNIA----------HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 Q A+ A + ++ + + + GD ++A Sbjct: 151 AQAAI--NDAEQALGPQQVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDNDTAVSE 202 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +A+ P + +V + +++ A + + N N A LL+ R Sbjct: 203 AREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMR 258 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHP 293 GD + D ++ + ++ A + + +A L++ P Sbjct: 259 QRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRLQQARDAGQLQPGD 315 Query: 294 EIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHA 346 E+ Y + + + KR R + ++ S + S A + + Sbjct: 316 EVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLD 375 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 P +++F +D W Sbjct: 376 YQQTGDLQMPAQQVF-------DTRRAVSDLSREW 403 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L +L TG ++A + A + Y L+ Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221 Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 IA QY A + AT + R+GD + A++ +A+ Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234 + + P +A + Y + S A+ L Q + + A L +L Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGQLQPGDEVQIAYFLSQAGDDQGAL 333 Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264 + + D A +++ +++ + Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369 >gi|239947347|ref|ZP_04699100.1| tetratricopeptide repeat family protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239921623|gb|EER21647.1| tetratricopeptide repeat family protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 323 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 100/302 (33%), Gaps = 24/302 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M RL+ L+ F ++ + V I+ + + F L + L + ++ Sbjct: 1 MFRLLLICATFLLLYFGFTLIESFDSKVFISLYDYNIEITLFFSLILGLLLLISCFIIIR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQQHTF 116 + P+ + ++ +KR + AL +++ A + A + +S + Sbjct: 61 FLILIIDLPSKIHNIFNKRKINHDRYAL---ILAFAEYIMNNKAKSASIVRKNLSSEDLK 117 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ L+ + + ++ + +L A+ Y Sbjct: 118 DSQEFHNLILAITEE---DVDRKISYFQKLITSKEFVFYGSKNLAKLYYDKSLYEKAENY 174 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE 235 ATKA + + +++ Y W++ I N+ K + E A + + + Sbjct: 175 ATKAYNFNELDSDNLITLMRCYAKLSLWTKFIFITNKLAKFHKHESMPEIAEYYLLAAKQ 234 Query: 236 NADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWKV 289 + + + A++ D + + + N K K IL+ + + Sbjct: 235 EVEGNNTANAIDYLETAVDLNFYNDELL-------EFYFNLNDKLNVNKKIKILKDAFCI 287 Query: 290 NP 291 P Sbjct: 288 IP 289 >gi|242065108|ref|XP_002453843.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor] gi|241933674|gb|EES06819.1| hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor] Length = 1011 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 75/243 (30%), Gaps = 20/243 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181 LL + E + P + Y + GD++ A RY A+ Sbjct: 125 LLLGAIYYQIRNYDMCIAKNEEALAIDP--QFAECYGNMANAWKEKGDIDLAIRYYLTAI 182 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P+ + Y + A Q +G Sbjct: 183 QLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINP----RLVDAHSNLGNLMKAQGF 238 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +Y IE+L++ + +A A + KA + ++ K+ P A+ Y + Sbjct: 239 IQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLK--PSFADAYLN 296 Query: 302 --------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + ++ + +RA + + + ++ I E G +D A A+ Sbjct: 297 QGNVYKALGMPQDAIMCYQRA---LQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 353 Query: 354 IAP 356 P Sbjct: 354 YDP 356 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 57/188 (30%), Gaps = 18/188 (9%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP--A 151 + A + + + L L++ Q A+ E + P A Sbjct: 203 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYSCYIEALRIDPHFA 257 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L+ E+ GDL+ A Y +A+ + P Y AI Sbjct: 258 IAWSNLAGLFMEA---GDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCY 314 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + ++ A+ + ++G + + +++ + A +L Sbjct: 315 QRALQARPDY----AMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFVEAYNNMGNALK 370 Query: 272 SQNKKRKA 279 + +A Sbjct: 371 DAGRVEEA 378 >gi|240281542|gb|EER45045.1| DnaJ domain-containing protein [Ajellomyces capsulatus H143] Length = 730 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%) Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ V+ L A + ML+ + G+ A ++ Sbjct: 395 RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 452 Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225 AL + PD+ + +++ ++++ AI + + + Sbjct: 453 KLALSLDPDSAQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 512 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + LL R+ + + D +LKL + A AK+ + +A +K Sbjct: 513 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 572 Query: 286 IWKVNP 291 I + NP Sbjct: 573 IAEANP 578 >gi|19264088|gb|AAH25030.1| Prpf6 protein [Mus musculus] Length = 570 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 88/229 (38%), Gaps = 26/229 (11%) Query: 167 IGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 I D+ A+ + +P P W+ A +++ + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEE--VTGKLQVARNLI---MKGTEMCPKS 342 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L A L+ D + + ++++ S+ I AA+ R + +L Sbjct: 343 EDVWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLR 394 Query: 285 KIWKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K + P+ + L E+ L RA E SVE + ++++ + + Sbjct: 395 KALEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYE 447 Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A A + P I++ A++E+A + NT + A+ ++ Sbjct: 448 NARKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|56751829|ref|YP_172530.1| hypothetical protein syc1820_d [Synechococcus elongatus PCC 6301] gi|81301089|ref|YP_401297.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942] gi|56686788|dbj|BAD80010.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81169970|gb|ABB58310.1| TPR repeat [Synechococcus elongatus PCC 7942] Length = 310 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 12/162 (7%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + +L Q A + +L+ T A+ +A Sbjct: 130 RLQPQQPAYRVLLAQTQAQLGDREAAAQTYRQILETAPTNLEALRGFTQLLLTQKQPTAA 189 Query: 174 QRYATKAL---DISPDAPWVTEAVV-QQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAIL 228 KA I+P + ++ Q Y + AI ++ + N +++ A Sbjct: 190 VDLLQKARQTDKITPADQVSIDLMLAQVYANQGQIDDAIALYDRSAQNNGRDFRPLLAKA 249 Query: 229 LIARSLENADKGDMIASYHDAI-------ESLKLCDNSIMAS 263 L+ + + K I AI + +L S+ A+ Sbjct: 250 LLLKQQGDLQKATPIFQEAIAIAPAQYRDQIRQLSPASMPAT 291 >gi|296446900|ref|ZP_06888836.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b] gi|296255575|gb|EFH02666.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b] Length = 346 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 60/173 (34%), Gaps = 6/173 (3%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A + LQ+ A+ + GDL+ A A+ + P Sbjct: 159 RADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHALADFDAAVKLEP 218 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + Y + A+ + + +A+ R L KGD + Sbjct: 219 KSARALLDRAAFYQAKGDLDHALADYDAAIAR----DGKQAVSYNNRGLALHAKGDYDKA 274 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 D ++++L A + A +L +++ A+ LE+ +++ P +A Sbjct: 275 LADFSKAIELDPKYARAYLNRANALRGKHELEPAKADLEQALRLD--PNLAAA 325 >gi|213967147|ref|ZP_03395296.1| hypothetical protein PSPTOT1_1843 [Pseudomonas syringae pv. tomato T1] gi|301381119|ref|ZP_07229537.1| hypothetical protein PsyrptM_00719 [Pseudomonas syringae pv. tomato Max13] gi|302060543|ref|ZP_07252084.1| hypothetical protein PsyrptK_11190 [Pseudomonas syringae pv. tomato K40] gi|302133188|ref|ZP_07259178.1| hypothetical protein PsyrptN_17449 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927989|gb|EEB61535.1| hypothetical protein PSPTOT1_1843 [Pseudomonas syringae pv. tomato T1] Length = 654 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 24/228 (10%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD +A A A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL R GD + D ++ L ++ A + + ++A L Sbjct: 246 NDATLLAQRGQLRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPKEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVESLVIVSK 333 +K P E+ Y + + G L KR R + ++ S + S Sbjct: 303 QKARDAGQLQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYSAMRSSD 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 A + + P +++F +D W Sbjct: 363 DAQAITYFKRVLDYQQTGDLQMPDQQVF-------DTRRAVSDLSREW 403 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 41/248 (16%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--- 220 + D + A A +AL DA + + + A+ ++ +++ + Sbjct: 44 AYNRKDYDLAIAKAREALRQRGDAEQLHDLI------------ALAERDKYRRDHPQQFP 91 Query: 221 -WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + ++L + D S + A +++ ++ + ++L Q + +A Sbjct: 92 KARVKPGYVEGNQALRAYARRDYDGSANHARKAIAQAPKNLDYRMMLIEALQRQQRLDQA 151 Query: 280 EVILEKIWKV-NPHPEI----------------ANIYTHLLSENTVGKLKRALRLEEINK 322 +V + + P P + A Y L + + A Sbjct: 152 QVAINDAEQAVGPQPVLTRRRQAIQEQVAVNKAAAGYKALARGDNETAVSEARDAVRSFP 211 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN----SHNTDKI 378 + + ++ + G +A + A A+ + LLAQ + + D Sbjct: 212 KQMAYRKLLVSALIAQGQYAEARSAATEALALNGND--ATLLAQ--RGQLRQRLGDQDGA 267 Query: 379 LYWTQSAL 386 AL Sbjct: 268 RQDFAQAL 275 >gi|304386520|ref|ZP_07368808.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC 13091] gi|304339349|gb|EFM05421.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC 13091] Length = 402 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 112/356 (31%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ + QQ ++ L ++ + + A ML P T Sbjct: 70 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 181 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + A+ A+E+ K C Sbjct: 182 RLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTRANMILGDIEH 241 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 292 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395 >gi|209524105|ref|ZP_03272656.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209495480|gb|EDZ95784.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 1676 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 17/202 (8%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A KA+ ++P + + Y + W +A+ + Sbjct: 961 SEAVAAFEKAVQLNPADATIHTNLGSLYAQMQRWEQAVKCYERAIALQPNL----VAAHR 1016 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILEKIWK 288 G + ++L L + AS + SL+ + ++AEV ++ + Sbjct: 1017 NLGKVWQKLGQPQQALSCRYQALILQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVR 1076 Query: 289 VNPHPEIANIYTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +PH Y +L + L R E+ +S ES + + + D Sbjct: 1077 RSPHDS--QAYHNLGEVLSAQGLWSQAEAAYRRAVELQPDSFESRNSLGQALVAQEKWDD 1134 Query: 344 AHAKAMLAMKIAPRKEIFLLLA 365 A A A++ PR LL+A Sbjct: 1135 AIACYGRALEQNPR----LLMA 1152 Score = 39.9 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 66/202 (32%), Gaps = 15/202 (7%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L L+ + R + +++ + ++ + + + A E + +L Sbjct: 157 LGRSLLGKQDGD----RAIAAFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALECFQKVL 212 Query: 148 QIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + ++S L + + D A + +A+ + + Sbjct: 213 SLAP-EFPGIHSDLAWSLMELADFPEAIAHLKEAIKGQEFLLTAYITQSENQSVDGSLGE 271 Query: 207 A-------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A + LNQ + + + ++L A+ + A+ ++LKL + Sbjct: 272 AQKACAQLLQALNQNDISVSVIKLAQTYFHLGQAL--AEYQNFGAAEQYYQKTLKLQPDF 329 Query: 260 IMASICAAKSLISQNKKRKAEV 281 A + L Q + ++A+ Sbjct: 330 TGAHLAWGDILREQGRIKEAQK 351 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 92/289 (31%), Gaps = 27/289 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A E +L L + A +++ A Sbjct: 1026 GQPQQALSCRYQALILQPDQGEASEFLAVGNSLLQGGRLQEAEVCYRQVVRRSPHDSQAY 1085 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++L G + A+ +A+++ PD+ ++ Q V ++W AI + + Sbjct: 1086 HNLGEVLSAQGLWSQAEAAYRRAVELQPDSFESRNSLGQALVAQEKWDDAIACYGRALEQ 1145 Query: 218 AKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIM-------------AS 263 A+ ++++L +++K ++ + + + + Sbjct: 1146 NP--RLLMALENLSKALRHSNKTLPPSQGRWLSLIAGRQIPEELPPPGGGAFAPPDVDVA 1203 Query: 264 ICAAKSLISQNK--KRKAEVILEKIWKVNPHPEIANIYT----HLLSENTVGKLKR-ALR 316 + A L Q + + W+ P A Y+ L+ GK R + Sbjct: 1204 LERATELYQQKRYQACVQQCQQVVQWR----PREARAYSLWGKALVGLAAYGKALRCYQQ 1259 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + ++ + ++ L++ +A A+K+ P I+ LA Sbjct: 1260 AIALEPKNGLWHQELGELCLQVRRYPEAIVSLQEAVKLKPHPRIYRSLA 1308 >gi|220915573|ref|YP_002490877.1| MJ0042 family finger-like protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219953427|gb|ACL63811.1| MJ0042 family finger-like protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 1163 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 84/280 (30%), Gaps = 22/280 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G ++A + A + + + AL + + A LE + Sbjct: 535 GEAALARGDAVKAAAAFQRLGGLEQGPRAPMGL---ARAALLRGKPDEARPTLEKLAAAD 591 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A A L + GD+ A+ + ++P + + + Sbjct: 592 AAYLPARLELAVLAEAAGDVGGARTH------LAPVLADAAQPRLAPLERGRARMVEAAL 645 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--- 267 L++ A + + L A A + ++ ++ S + AA Sbjct: 646 LDRSAATAADAEKALLAALDADPRLAAARAALVRQRLRRGDAAGAVAASDPVAAEAASDP 705 Query: 268 -------KSLISQNKKRKAEVILEKIWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRL 317 ++L + A + ++ + P P + A + Sbjct: 706 ELAAARVRALALAGRALDAAQLADQALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEA 765 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E+VE V + ++AL G + A A++ PR Sbjct: 766 LARDAEAVEPRVALGRLALARGDLPAAREALAQAVEKGPR 805 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 73/248 (29%), Gaps = 7/248 (2%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + + + A + A L A +L + GDL Sbjct: 731 ALRAAPGTPALLVAKAVALSAAGKPQEAAALYGEALARDAEAVEPRVALGRLALARGDLP 790 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A+ +A++ P P A+ + + A + A ++ Sbjct: 791 AAREALAQAVEKGPRDPAAHAALGELRAAD----GDAAGAEAAYRAALALDAEHAAAVLG 846 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +GD+ A+ + +L L S A + S KAE L + P Sbjct: 847 LARLAQARGDVAAARDGLVRALALEPRSAEAQLALGTLEWSARDLAKAEAALAIAVDLQP 906 Query: 292 HPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 A L + +K + E+ + + L G A + Sbjct: 907 RNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRALLARGETPAALVRL 966 Query: 349 MLAMKIAP 356 A++++P Sbjct: 967 RKAVELSP 974 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 6/201 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G +++A ++P AR + + + ++ A+ A L + Sbjct: 780 GRLALARGDLPAAR--EALAQAVEKGPRDPAAHAALGELRAADGDAAGAEAAYRAALALD 837 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A AV L + GD+ +A+ +AL + P + A+ A++ + Sbjct: 838 AEHAAAVLGLARLAQARGDVAAARDGLVRALALEPRSAEAQLALGTLEWSARD----LAK 893 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + A L ++GD A+ + + A + ++L Sbjct: 894 AEAALAIAVDLQPRNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAGEAQLWFGRAL 953 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 +++ + A V L K +++P Sbjct: 954 LARGETPAALVRLRKAVELSP 974 >gi|186475087|ref|YP_001856557.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gi|184191546|gb|ACC69511.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum STM815] Length = 613 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 103/305 (33%), Gaps = 49/305 (16%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180 +L ++AL Q A++ + + A + + + D +A + + Sbjct: 87 QVLAAEVALQRNQPAPAYQTYLSLARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQE- 145 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI---------- 230 +P + + VL+ + A L ++ NR IL + Sbjct: 146 --YAPQSERAAQLDASLLVLSGKPDDAKPMLAKELAKIPPENRGNGILALQLLISRGPNR 203 Query: 231 ----------------------ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 A + + D + ++LKL + + A++ ++ Sbjct: 204 VGGLHVLQDLLANDMNRPEAQFAIARQQLIADDAPGARKSLEQALKLKPDYLPAALMLSQ 263 Query: 269 SLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRLEEINKESV 325 ++++ LEK + NP H +A +L S+ K+ +++ N + Sbjct: 264 MGPE--ERKEGIASLEKYVQANPKSHEARLALAQMYLASDRLDDAQKQFEFMQKDNPNDL 321 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKIL 379 L+ ++ I ++ ++ +A + A + + ++ LAQ+ +T Sbjct: 322 TPLMALALIKIQQKNLPEAQNYLQQYAQKAEKTPGADAGQAYIYLAQL-SLEQKDTAGAS 380 Query: 380 YWTQS 384 W Sbjct: 381 RWLDK 385 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 74/247 (29%), Gaps = 51/247 (20%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA----QRYA 177 L Q+ LA + + A ++ E M + + +L + +L A Q+YA Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEFMQKDNPNDLTPLMALALIKIQQKNLPEAQNYLQQYA 348 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 KA + +P A +A I + + Sbjct: 349 QKA-EKTPGAD-AGQA-----------------------------------YIYLAQLSL 371 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP---- 293 ++ D + + I A I A+ L Q K A +L I +P Sbjct: 372 EQKDTAGASRWLDKISATSTQYIPAQITRAQLLQRQGKVDDARKLLAGIRAQDPREQALI 431 Query: 294 ---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + A ++ + +L +A + + + A + G D + Sbjct: 432 ARTDAAILFDAKRYQEAETRLAQA---TGDFPDDPDLTYDYAMAAEKNGHYDVMETQLRK 488 Query: 351 AMKIAPR 357 M+ P Sbjct: 489 LMRTQPD 495 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 8/179 (4%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 ++ A + A A + + + L Y A Y++ Sbjct: 426 REQALIARTDAAILFDAKRYQEAETRLAQATGD-FPDDPDLTYD-YAMAAEKNGHYDVME 483 Query: 141 EKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 +L +++ A +L Y + R L A + KAL +SP+ ++ ++V Sbjct: 484 TQLRKLMRTQPDNAQAYNALGYSLADRGQRLQEADKLVEKALSLSPNDAFIMDSVGWVKY 543 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + S AI L + + GD + ++ KL + Sbjct: 544 RLGDTSDAIRVLRKAYDLQPNAE-----IGAHLGEVLWKSGDQDQARAAWRDARKLEPD 597 >gi|317154918|ref|YP_004122966.1| tetratricopeptide domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316945169|gb|ADU64220.1| Tetratricopeptide repeat protein [Desulfovibrio aespoeensis Aspo-2] Length = 1039 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 98/300 (32%), Gaps = 43/300 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++ L + + A + + Q + +F S R+ + +A + A A PD Sbjct: 98 AEVLLRLGREDEAQKLYHTLDQNDPRVAGGLGDAFFASGRMAEAATAYQRARDAGSQRPD 157 Query: 187 A--------PWVTEA---------------------VV--QQYVLAKEWSRAITFLNQKK 215 W +A ++ + A + RA L+Q Sbjct: 158 LSLRLAQAMAWSGQAERAAPLLAELHAAHPADVEIALLYSRALAQAGDTRRARAVLDQLA 217 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A + A LL + A G A+ A++++K D A + A+ + Sbjct: 218 AAAPD----NATLLFELADLEAALGHASAARKYAMQAVKADDTRQ-ARLRLAQVMTLWGA 272 Query: 276 KRKAEVIL-EKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +++ I E + P P+ +A + R +E N + ++ + Sbjct: 273 FQQSVAIRREHVATQGPEPQVALALAETLASAQRYEEAEGVLRVELME--NPDDTQARLA 330 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++++ L+ + + A A K + L AQ + + W + A Sbjct: 331 LARVKLQEKNGEAALAVLAPLTKTGSDPRVEALRAQALTLLGRYAEAVAIWRRLAHDDPA 390 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 55/232 (23%), Gaps = 43/232 (18%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L Q +Y A + L R GD +A+ +A + Sbjct: 363 LRAQALTLLGRYAEAVAIWRRLAHDDPAMLVE---LGRALERAGDELAAKDVFDRAYGLD 419 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 PD P + + A A L + + G Sbjct: 420 PDFPPAH---YYAVMCRPDCDPA------ALSRELVHTEKDAADLTLWADLFSRDGHHAE 470 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + +L A + A++L Y Sbjct: 471 AIACLEAALGHDPQFFPAHMALAENL---------------------------AYARRFD 503 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E+ L R L +S + L+ +++ D+A A P Sbjct: 504 ES----LNRLDGLATDFPDSSKVLLTRARVLAWAKRYDEAIAAFEALHAADP 551 >gi|258406366|ref|YP_003199108.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798593|gb|ACV69530.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense DSM 5692] Length = 252 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 5/168 (2%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A ++ +A+ I P+ + Q YV +A + RA L +A Sbjct: 86 AAAKHLRQAVAIDPEFAQAWNNLGQVYVAQSRPDKAEQAFQTALDTLTYLSPERAALNLA 145 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288 R + D+ + A+ +++ D A + + L+SQ + +A LE Sbjct: 146 RLYQQTDR--PQKAADLALRAIEENDRFEPAYLVLNEVLVSQGQIEEALTRLETAQAKLP 203 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 P +A HL NT R+ +S E+ V +AL Sbjct: 204 KRPAMLLALAENHLRVGNTAYARTWFQRIIAAAPQSEEAEVARDYLAL 251 >gi|238796092|ref|ZP_04639603.1| Cellulose synthase operon protein C [Yersinia mollaretii ATCC 43969] gi|238720037|gb|EEQ11842.1| Cellulose synthase operon protein C [Yersinia mollaretii ATCC 43969] Length = 1317 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 91/266 (34%), Gaps = 40/266 (15%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--ALDI 183 + LA A L + Q P + V +L + GD ++A K + I Sbjct: 556 SAEAYLANGDSASAAVILRGLAQNPPSAPSDVGNLAKDLMTAGDSSTAVSLVRKNISSGI 615 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLN----QKKKNAKEWNRNRAILLIARSLENADK 239 A A + + A L+ Q + E +R R I ++ E ++ Sbjct: 616 HGKAGDYA-AQIGVLTQSGLTQEAEALLSNPAIQSSSSPIEISRLRMGSAINQADELREQ 674 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G A+Y I +L+ +I + + S +A + Y Sbjct: 675 GQYAAAYDKLIVALQSDPQNIDLMLAMGRLYQSGKMNDEAGKV----------------Y 718 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 +L LKR + + + V +AL G + A ML M+ E Sbjct: 719 AYL--------LKR-------DPANEGARVGAVNVALAKGDVQSARQ-LMLGMRGPRTPE 762 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSA 385 LL A++ +A + ++ L +SA Sbjct: 763 RLLLAARVAEAE-GDHEQALALLRSA 787 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 8/67 (11%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++A ++ AR++ + T LL ++A AE + A +L+ Sbjct: 738 VALAKGDVQSARQLMLGMRGPRTPER----LLLAARVAEAEGDHEQAL----ALLRSAKG 789 Query: 153 REFAVYS 159 + + Sbjct: 790 KMIGLEG 796 >gi|225556678|gb|EEH04966.1| DnaJ domain-containing protein [Ajellomyces capsulatus G186AR] Length = 745 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 19/186 (10%) Query: 123 YLLEVQIALAERQ---YNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYA 177 L+ V+ L A + ML+ + G+ A ++ Sbjct: 396 RLMRVEAYLKMGNVNSLGDAQNIVMSMLRDNNQDPDALLLRG--RLFYAQGENEQAIKHF 453 Query: 178 TKALDISPDAPWV------TEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNR 225 AL + PD+ + +++ ++++ AI + + + Sbjct: 454 KLALSLDPDSTQAIRYLRMVQKLLRMKDEGNAAFKSRKYQEAIDLYTKALEVDPKNKDIN 513 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + LL R+ + + D +LKL + A AK+ + +A +K Sbjct: 514 SKLLQNRAQAYLNLSIYDKAIEDCTSALKLDPAYVKAQRVRAKAYGAAGNWEEASREFKK 573 Query: 286 IWKVNP 291 I + NP Sbjct: 574 IAEANP 579 >gi|261868285|ref|YP_003256207.1| hypothetical protein D11S_1624 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413617|gb|ACX82988.1| tetratricopeptide domain protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 396 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 88/290 (30%), Gaps = 55/290 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151 + A ++H + + E LL Q + + + A +M+ P Sbjct: 91 GEVDRALRIHQALDNSPHYSFEQ--KLLAKQ--QLAKDFMTVGFFDRAENLYILMVDEPE 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 +A AL V+ Q W +AI Sbjct: 147 ------------------------FAEGALQ--------QLTVIYQKTKE--WKKAINVA 172 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K A + N +++ +++LK+ N + AS+ A I Sbjct: 173 EKLAKIAPKANNVELAQYYCEYVQHLPADSKENRQQILLQALKVSPNCVRASMMLADLAI 232 Query: 272 SQNKKRKAEVILEK------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 Q + A LE+ + P + + Y L N + + L + Sbjct: 233 QQENYKSAVGFLEEILNQSPAYISEALPALKHCYQKL---NLLDNFELFLIKASRQNNNS 289 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSH 373 +++++++ E A K ++ P IF + QI+ A Sbjct: 290 AVVLMLAELIEEKDGYSAAQLKLYQQLQQNPSTPIFHRFIQYQIDDAEQG 339 >gi|209527262|ref|ZP_03275773.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209492329|gb|EDZ92673.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 501 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 61/201 (30%), Gaps = 12/201 (5%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G+ A +AL PD + ++ +A++ +Q K + ++ Sbjct: 207 SGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHK--- 263 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 R +D G+ + E+LK + +L + ++A ++ Sbjct: 264 -AWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQA 322 Query: 287 WKVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K P++ + + L E L+ + E +G Sbjct: 323 LKYK--PDLHKAWFSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHLGE 380 Query: 341 IDQAHAKAMLAMKIAPRKEIF 361 QA + A+ P + Sbjct: 381 YKQAISSYDQALTYKPDDHVA 401 >gi|110677907|ref|YP_680914.1| hypothetical protein RD1_0522 [Roseobacter denitrificans OCh 114] gi|109454023|gb|ABG30228.1| hypothetical protein RD1_0522 [Roseobacter denitrificans OCh 114] Length = 645 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 18/170 (10%) Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L A D + A + + AA + + R+ I Sbjct: 473 ATLGAELSSMLTDTDPLV-RAAAASAH----GLFPPAERAAALEPALDDPRRMVRI--AA 525 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKIALEMGSID 342 K + ++ L+ + +L ALR + + E+ +I++ AL M + + Sbjct: 526 GKT-----LLDVPRSALTPSASERLGAALREWQAGLLNRADFPETHIILAGTALTMRNFE 580 Query: 343 QAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + + P R+E +++L +I A AL A+P Sbjct: 581 GAERAFREVVLMDPQREEAWVMLVRIADAMRGPQAAAQV-LDEALQAVPG 629 >gi|323174181|gb|EFZ59809.1| cellulose synthase operon protein C [Escherichia coli LT-68] Length = 932 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 624 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 675 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 567 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 627 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 721 >gi|91213036|ref|YP_543022.1| cellulose synthase subunit BcsC [Escherichia coli UTI89] gi|117625813|ref|YP_859136.1| cellulose synthase subunit BcsC [Escherichia coli APEC O1] gi|218560606|ref|YP_002393519.1| cellulose synthase subunit BcsC [Escherichia coli S88] gi|218691814|ref|YP_002400026.1| cellulose synthase subunit BcsC [Escherichia coli ED1a] gi|237703300|ref|ZP_04533781.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA] gi|91074610|gb|ABE09491.1| cellulose synthase operon protein C [Escherichia coli UTI89] gi|115514937|gb|ABJ03012.1| cellulose synthase operon protein C [Escherichia coli APEC O1] gi|218367375|emb|CAR05154.1| cellulose synthase subunit [Escherichia coli S88] gi|218429378|emb|CAR10196.1| cellulose synthase subunit [Escherichia coli ED1a] gi|222035240|emb|CAP77985.1| Cellulose synthase operon protein C [Escherichia coli LF82] gi|226902564|gb|EEH88823.1| cellulose synthase subunit BcsC [Escherichia sp. 3_2_53FAA] gi|307628609|gb|ADN72913.1| cellulose synthase subunit BcsC [Escherichia coli UM146] gi|312948089|gb|ADR28916.1| cellulose synthase subunit BcsC [Escherichia coli O83:H1 str. NRG 857C] gi|315286199|gb|EFU45635.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3] gi|323949771|gb|EGB45655.1| cellulose synthase operon protein C [Escherichia coli H252] gi|323954928|gb|EGB50708.1| cellulose synthase operon protein C [Escherichia coli H263] Length = 1157 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273 + +L + + + E +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ I + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K I + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738 >gi|301118749|ref|XP_002907102.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262105614|gb|EEY63666.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 5122 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 78/266 (29%), Gaps = 54/266 (20%) Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 R A+ L+ E+ + D +A+ A + +A++ Q V A +W Sbjct: 4853 RALALRWLW-EARDLRD-AAARNVAAE-------LRDKLQALIDQIVEADDWFFGRELRE 4903 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI------CA 266 + A L ++ + D I + +E+ S A+ Sbjct: 4904 AGLALRDDG----AQLAEEQARVDEDLAQKIRATERDVEAFVEDKRSTNATEEKAFNELV 4959 Query: 267 AKSLISQNKKRKAEVILE--KIWKVNPH----------------PEIAN---IYTHLLSE 305 AK K R A LE + +K P + Y ++E Sbjct: 4960 AK-EREDTKARLAARELELLEAYKQKETEFAAAQRQAREAEELVPALVAEHRTYLAKIAE 5018 Query: 306 NTVGKLKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + +L+ + E + +++ A+ A +LA++ R + Sbjct: 5019 DRRTELESMEETASAKTQQKEDAFARKLALAEAAV-ASRRALA-QHRILALRKEARGVV- 5075 Query: 362 LLLAQIEQANSHNTDKILYWTQSALH 387 S K W A Sbjct: 5076 ------RARESAWQSKARSWIDRASR 5095 >gi|253566350|ref|ZP_04843804.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945454|gb|EES85892.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301164672|emb|CBW24231.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 320 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + A + L I + L + G+ A + + + P+ Sbjct: 38 AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQLYIQTGEFGKAHELLERMIALEPELTS 96 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++ +K A E A L+ ++ D G M ++ Sbjct: 97 TYLTLANLCFMQEDYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 +++ L D+ A + A++L + +A +E I NP E A + + G Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211 Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 K + A + EIN + ++ + + ++ + + A A+++ P Sbjct: 212 KEEEAETDYLHVTEINPFNEQAYLYLGQLFITQKKLTAAIELFDEAIELNP 262 >gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 818 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 4/177 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + +Y+ A + L++ A + R G+ + A +AL + P + Sbjct: 375 AFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSA 434 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ RAI L+Q + + R + KGD+ + D Sbjct: 435 AAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYH----RGMAFRHKGDLDRALAD 490 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 E+++L A + ++ + +A L + ++ P E + + E Sbjct: 491 LNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRGE 547 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 74/228 (32%), Gaps = 11/228 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +YN A + L++ A G+ + A +AL +P + Sbjct: 278 GEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRN 337 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + E+ RAI Q + + A R L DKG+ + D ++L Sbjct: 338 RGDAFRNKGEYDRAIADYTQALR----LDPQSATAYNNRGLAFQDKGEYDRAIADYDQAL 393 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVG 309 +L A + + + +A E+ +++ P+ A Y L + Sbjct: 394 RLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLD--PKSAAAYNGRGAALNKKGDYD 451 Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + G +D+A A A+++ P Sbjct: 452 RAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNP 499 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 11/233 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y+ A + L++ + G+ + A +AL +P P+ Sbjct: 142 GEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRN 201 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + E+ RAI +Q + E A R L K + + D ++L Sbjct: 202 RGDTFQSKGEYDRAIADYDQALRLNPE----DAAAYTHRGLAFQSKSEYDRAIADYDQAL 257 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTV 308 +L I + S+ + +A ++ +++P IA + + EN Sbjct: 258 RLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRS-KGENDR 316 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L N + + G D+A A A+++ P+ Sbjct: 317 AIADYDQAL-RFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATA 368 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 6/170 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL A + Y + Y + +++ A E L++ Sbjct: 372 RGLAFQDKGEYDRA--IADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRL 429 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A + GD + A +AL + P + + RA+ Sbjct: 430 DPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALA 489 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 LN+ + ++ A R + +G+ + D E+++L Sbjct: 490 DLNEAVRLNPKY----ADAYQERGVTFQARGESDRALADLAEAVRLKPEL 535 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%) Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 +Y+ A + + P + L F R G+ + A +AL + P + Sbjct: 74 GEYDRAIADYDQALRLDPKSAVAYTHRGLAF--YRKGEYDRAIADYDQALRLDPKYANIY 131 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + E+ RAI +Q + + A++ R KG+ + D + Sbjct: 132 INRGLAFYRKGEYDRAIADYDQALR----LDLRDAVVYTNRGDAFRSKGEYDRAIADYDQ 187 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENT 307 +L+ A + S+ + +A ++ ++N PE A YTH S++ Sbjct: 188 ALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLN--PEDAAAYTHRGLAFQSKSE 245 Query: 308 VGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + ++ + + G ++A A A+++ P Sbjct: 246 YDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 295 >gi|20090723|ref|NP_616798.1| hypothetical protein MA1873 [Methanosarcina acetivorans C2A] gi|19915778|gb|AAM05278.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 306 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 74/235 (31%), Gaps = 19/235 (8%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + +A + + +L+ A+Y ++ A +A +I P+ Sbjct: 57 ALYRQGRLRLALKAFDRVLEENPRDFPALYHKGNSLLKLKRYEEALEIFERAAEIKPENA 116 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNRAILLIARSLENADKGDMIA 244 + + + + A+ + W ++L + E + ++ Sbjct: 117 GLWTNMGFALKKLERFRDALEAFEKSISLNPVQKNAWEGKDSVLSLISLCE-----EKLS 171 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299 Y +E + A K + ++ KA + +V PE A + Sbjct: 172 EYEKILERNPGDPD---ALFKTGKLWLRFGEQEKAMQAFKNALEVK--PENAEAWKLRGK 226 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + L + + E+ K+ L++G++ A +A + Sbjct: 227 ILFKAGSEKEALHAFENATRLKPDHPEAWYERGKVFLKLGNLRAAENAFKIAADL 281 >gi|21539655|ref|NP_598462.1| pre-mRNA-processing factor 6 [Mus musculus] gi|24212090|sp|Q91YR7|PRP6_MOUSE RecName: Full=Pre-mRNA-processing factor 6; AltName: Full=PRP6 homolog; AltName: Full=U5 snRNP-associated 102 kDa protein; Short=U5-102 kDa protein gi|15928820|gb|AAH14869.1| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus] gi|26349501|dbj|BAC38390.1| unnamed protein product [Mus musculus] gi|37537235|gb|AAH23691.2| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus] gi|148675491|gb|EDL07438.1| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus] gi|220941571|emb|CAX15563.1| PRP6 pre-mRNA splicing factor 6 homolog (yeast) [Mus musculus] Length = 941 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 104/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A + A Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQE 696 Query: 229 LIARSL--------------ENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + ++G+ M + + LK C +S + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|330975658|gb|EGH75724.1| peptidase aspartic, active site protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 654 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 99/335 (29%), Gaps = 52/335 (15%) Query: 77 HKRNYDKGYKALYTGLMSIAAHN----IPLARKMHSYVSQ---QHTFHNEYLVY---LLE 126 +K GY L + A H+ ARK + + E L L E Sbjct: 91 YKTRPKPGYLEGNQALRAYARHDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDE 150 Query: 127 VQIALAERQYNIA----------HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 Q A+ A + ++ + + + GD ++A Sbjct: 151 AQAAI--NDAEQALGPQQVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDNDTAVSE 202 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +A+ P + +V + +++ A + + N N A LL+ R Sbjct: 203 AREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMR 258 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHP 293 GD + D ++ + ++ A + + +A L++ P Sbjct: 259 QRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRLQQARDAGQLQPGD 315 Query: 294 EIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHA 346 E+ Y + + + KR R + ++ S + S A + + Sbjct: 316 EVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAYFKRVLD 375 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 P +++F +D W Sbjct: 376 YQQTGDLQMPAQQVF-------DTRRAVSDLSREW 403 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 25/216 (11%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L +L TG ++A + A + +F + L Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTA--VSEAREAVRSFPKQMAYRKL 219 Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 V +A+ QY A + AT + R+GD + A++ +A+ Sbjct: 220 LVSALIAQGQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234 + + P +A + Y + S A+ L Q + + A L +L Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGQLQPGDEVQIAYFLSQAGDDQGAL 333 Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264 + + D A +++ +++ + Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369 >gi|218190772|gb|EEC73199.1| hypothetical protein OsI_07263 [Oryza sativa Indica Group] Length = 1004 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 71/240 (29%), Gaps = 14/240 (5%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181 LL + E + P Y + GD++ A RY A+ Sbjct: 116 LLLGAIYYQIRNYDMCIAKNEEALAIDPN--FAECYGNMANAWKEKGDVDLAIRYYLTAI 173 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P+ + Y + A Q +G Sbjct: 174 QLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINP----RLVDAHSNLGNLMKAQGF 229 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +Y+ IE+L++ +A A + KA + ++ K+ P A+ Y + Sbjct: 230 IQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLK--PSFADAYLN 287 Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + R + + + ++ I E G +D A A+ P Sbjct: 288 QGNVYKTMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 56/188 (29%), Gaps = 18/188 (9%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-- 151 + A + + + L L++ Q A+ E + P Sbjct: 194 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYNCYIEALRIDPQFA 248 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L+ E+ GDL+ A Y +A+ + P Y AI Sbjct: 249 IAWSNLAGLFMEA---GDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISY 305 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + ++ A+ + ++G + + +++ + A +L Sbjct: 306 QRAVQARPDY----AMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALK 361 Query: 272 SQNKKRKA 279 + +A Sbjct: 362 DAGRVEEA 369 >gi|196232945|ref|ZP_03131794.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196222923|gb|EDY17444.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 808 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 87/281 (30%), Gaps = 21/281 (7%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE- 144 +A L A + A ++ + H + L +LL V Q+ A L Sbjct: 14 QAFDLALQHHQAGRLAEAEGLYRQILAVQPDHAQAL-HLLGVIALQM-GQHEAAENLLRR 71 Query: 145 --MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 M + + + R+ D +A +A+++ PD + + Sbjct: 72 SIAMAPDNPAAHYDLGNALRSRKRLEDAIAAY---RRAIELRPDYVEALHNLGVACKESG 128 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 AI + + ++ + +++ L + + A Sbjct: 129 RLDEAIAAFQGALRLQP----QLMVAHYNLGNALRERKRYGEAIAAYRQAIALGPDYVDA 184 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALR 316 + + +A ++ ++ P H + + + + + +RA+ Sbjct: 185 HNNLGVACKEAGRFEEAVAAYQRAIELQPDHAAAHNNLGAAWRERGALDEAIVAQRRAIE 244 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L + E+ + E G D+A A ++++ P Sbjct: 245 L---RPDFAEAYNNLGVACKERGRTDEAVAAFRRSIELQPD 282 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 19/233 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + L++ A Y+L E R G+ +A +A+ + PD Sbjct: 127 SGRLDEAIAAFQGALRLQPQLMVAHYNLGNALRERKRYGEAIAAY---RQAIALGPDYVD 183 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + A + A+ + A E + A ++G + + Sbjct: 184 AHNNLGVACKEAGRFEEAV----AAYQRAIELQPDHAAAHNNLGAAWRERGALDEAIVAQ 239 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LL 303 +++L + A + + + +A + ++ P H + N Sbjct: 240 RRAIELRPDFAEAYNNLGVACKERGRTDEAVAAFRRSIELQPDFAETHNNLGNTLQECGR 299 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + +RAL L E + ++ +G +D+A A A+++ P Sbjct: 300 ADEAIAAYRRALAL---QPEYAAAANNLASTLRSVGLLDEATAAIRRALELQP 349 >gi|60683152|ref|YP_213296.1| hypothetical protein BF3707 [Bacteroides fragilis NCTC 9343] gi|265767048|ref|ZP_06094877.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60494586|emb|CAH09387.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] gi|263253425|gb|EEZ24901.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 320 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + A + L I + L + G+ A + + + P+ Sbjct: 38 AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQLYIQTGEFGKAHELLERMIALEPELTS 96 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++ +K A E A L+ ++ D G M ++ Sbjct: 97 TYLTLANLCFMQEDYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 +++ L D+ A + A++L + +A +E I NP E A + + G Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211 Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 K + A + EIN + ++ + + ++ + + A A+++ P Sbjct: 212 KEEEAETDYLHVTEINPFNEQAYLYLGQLFITQKKLTAAIELFDEAIELNP 262 >gi|291569288|dbj|BAI91560.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 917 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 30/223 (13%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 N M +Y N+ + Y Q+ ++ A + + + Y Sbjct: 51 NGQFIAAMGAYTKAFELAPNQPISYAYLAQVYRNMGWFDEAISFYQQAIDLSPNWADLHY 110 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L G++ A KA+ ++P + + + + AI L Q + N Sbjct: 111 HLGMTWHWQGNIEGAIGCYQKAIALNPKLGEAYLDMALRLNERGDINTAIKVLQQGRINC 170 Query: 219 KEWNRN---------------RAILLIARSLEN---------------ADKGDMIASYHD 248 + AI + +L A +G + + Sbjct: 171 PNFKEIFNTLGYLQLQQNQIDEAIAIFQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAA 230 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++ L + +A K +N R+A +K + P Sbjct: 231 YHKAISLKPDLAIAYSNLGKLWQHKNNHRQAITYFQKAIAIEP 273 >gi|114683099|ref|XP_001151733.1| PREDICTED: PRP6 pre-mRNA processing factor 6 homolog isoform 1 [Pan troglodytes] gi|119595581|gb|EAW75175.1| chromosome 20 open reading frame 14, isoform CRA_b [Homo sapiens] Length = 520 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 158 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 215 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 216 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 275 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 276 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 335 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 336 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 393 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 394 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 451 Query: 391 D 391 D Sbjct: 452 D 452 >gi|229016876|ref|ZP_04173804.1| hypothetical protein bcere0030_14440 [Bacillus cereus AH1273] gi|229023082|ref|ZP_04179596.1| hypothetical protein bcere0029_14260 [Bacillus cereus AH1272] gi|228738228|gb|EEL88710.1| hypothetical protein bcere0029_14260 [Bacillus cereus AH1272] gi|228744437|gb|EEL94511.1| hypothetical protein bcere0030_14440 [Bacillus cereus AH1273] Length = 420 Score = 49.2 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 92/271 (33%), Gaps = 39/271 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + +E ++ ++ ++ + A E +L A+ L Sbjct: 121 QKLLKAKEMMPDEPVITFGLAELYSSKGEEQKAITYYESLLAEHKVMGGVVIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+ A Y L+ D + Y +E+ RAI + KE + Sbjct: 180 LSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLY-QGEEYQRAIG----AWQELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY E +K+ + S+ + A K +AE +L Sbjct: 235 EYASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANISAKLGKITEAEEVL 294 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + Y ++L E E E L+ V + ++ G Sbjct: 295 QKALELDPGH--LGATLKYAYILKEQ----------------EKYEELIAVVERTIDSGE 336 Query: 341 ------IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 337 PDTQLLWDLAFAKKQLEMYSDALKHYESAYT 367 >gi|301106837|ref|XP_002902501.1| pre-mRNA-processing factor, putative [Phytophthora infestans T30-4] gi|262098375|gb|EEY56427.1| pre-mRNA-processing factor, putative [Phytophthora infestans T30-4] Length = 961 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 65/212 (30%), Gaps = 10/212 (4%) Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 W+ ++++ + + K ++ + + + E D + + Sbjct: 691 HVWMKSVLLERECAENR-KDEEDLVQEGIKLYPDFPKLYM--MAGQFYEALDPPNFEKAK 747 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 E ++ C SI +++ N KA +LE NP ++ ++ Sbjct: 748 KMYREGVQHCPKSIALWTLSSRLEEKMNGVTKARSVLEMARLKNPKNDM--LWLEAARLE 805 Query: 307 TV-GKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 K L +E ES +++++ Q A K + L + Sbjct: 806 ARWDNSKGQEMLMAKALQECPESGILLAESIDIAPRAQQKRASFTALKKKDNDPSVCLSV 865 Query: 365 AQIEQANSHNTDKILYWTQSA--LHAMPDPLW 394 A++ K W + L + W Sbjct: 866 AKLFWQERK-YSKARKWMERTIQLDSDLGDAW 896 >gi|223939617|ref|ZP_03631491.1| TPR repeat-containing protein [bacterium Ellin514] gi|223891668|gb|EEF58155.1| TPR repeat-containing protein [bacterium Ellin514] Length = 502 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 43/224 (19%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L E RIG +A++Y ++A I+P +P E + + AI FL Q + Sbjct: 305 HLGNELLRIGRGETAEKYFSQAHKIAPASPLPYEGLGLLAAHEHKSEAAIDFLKQAFDHG 364 Query: 219 KEW---------NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + R +K A + +S+ + + A Sbjct: 365 STSFLAHYVYAQEKFRQTADSRERYTKLEKDAASAIREELEKSIAVMPSFGPAQHLLGFF 424 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 I Q ++A + L+RA++LE N+ + S Sbjct: 425 EIVQGD------------------DLA---------SAEQHLQRAIQLEPENQSYLFS-- 455 Query: 330 IVSKIALEMGSIDQAHAKAMLA----MKIAPRKEIFLLLAQIEQ 369 +++ + D A + R++ +LA+I + Sbjct: 456 -LAQAQIARNEPDAARQTLDPLRLPNVDKKLRQQAEQILAEIPR 498 >gi|237836913|ref|XP_002367754.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii ME49] gi|211965418|gb|EEB00614.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii ME49] Length = 985 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 53/353 (15%), Positives = 110/353 (31%), Gaps = 60/353 (16%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL G ++ A + + + + L L A E ++ + ++ Sbjct: 615 EALSRGSVATA--------RALYTCAIERLKTKKSLWLAL----ADLETKHGTTQDLEKL 662 Query: 146 MLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + + P + L + GD+ +A++ +A + + ++ A V+ Sbjct: 663 LAKAVVCCPQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLEREN 721 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-- 259 E++RA L + + + + + R + + D IA +A++S C Sbjct: 722 HEFARARKILKRTRAHVNTQKVWIQSVQLERQVGDYDAA--IALCEEALKSHAECPKLWM 779 Query: 260 --------------------------------IMASICAAKSLISQNKKRKAEVILEKIW 287 + +CA Q K A ILEK Sbjct: 780 IGGQLHREHPTKKDEEKAAEVFQRGTVVCCRSVPLWLCAVDCQREQGKWSVARAILEKAK 839 Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAH 345 NP +P++ + + E G + A + E S ++ ++ Q H Sbjct: 840 LRNPKNPDLWHAAIRIEVE--AGNKQMAQHVASKAVQECPNSGLVWAEAIFLEEKSAQTH 897 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396 K + L +A + K W ++ A W + Sbjct: 898 KAVDALTKCENDVHLVLAVACLFWKEGK-ISKARKWLNRSVTLDASFGDAWAA 949 >gi|206603244|gb|EDZ39724.1| Protein of unknown function [Leptospirillum sp. Group II '5-way CG'] Length = 468 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 90/306 (29%), Gaps = 29/306 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPW 189 A V +L Y ++ R+ D + Sbjct: 131 TGDATGAIRLHRRARVFDEEDVRLVIALCEDYRQAGRLDDEIAILS--EYFHKKEGRNID 188 Query: 190 VTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIAR---SLENADKGDMI 243 V + V ++W A+ L++ + + + L+ R + + + Sbjct: 189 VLGRYRDRLVSRQKWEEALAVQSVLSRSFGKGERRDLEVSYLVGIRYETGRHHLEHAETE 248 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + +LK+ A I A++ + + +A LE+ ++ + P +Y +LL Sbjct: 249 LARRSFRGALKIDPLFSPARIGLAEAQSREGRVSEALTTLEEGFQRDRDP----VYLYLL 304 Query: 304 SE------NTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIA 355 E + L R + ++ S ++ ++ L + +D A + Sbjct: 305 EEMALEAGSPERILTPFERAVLSDPQN--SSLLYAQARLYDRLMMVDLALDRLESLEGRE 362 Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDDGYLSSVWLPLSPIS 412 + + LL + + + L Q A P L+ G W Sbjct: 363 NWEGEFYRLLGDL-YLRNKDRVNALEAFQKGARAENHPGRLYCRFCGQRYLQWAGKCLSC 421 Query: 413 KTLCYF 418 Sbjct: 422 HRWGAL 427 >gi|119946471|ref|YP_944151.1| sulfotransferase [Psychromonas ingrahamii 37] gi|119865075|gb|ABM04552.1| sulfotransferase containing TPR domain [Psychromonas ingrahamii 37] Length = 889 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 12/170 (7%) Query: 101 PLARKMHSYVSQQHTFHNEYL--VYLLEVQI----ALAERQY---NIAHEKLEMMLQIPA 151 A K + + L + L Q A E Q +++ + +L A Sbjct: 312 KAAEKAVALAQALTETPEQPLAEIKWLRAQASNVLAQVESQEQNFDLSEKLYRDILTEHA 371 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ L + + G ++ A + I P A++ ++ + + Sbjct: 372 HFLPALQGLAQQLMQQGHIDEALELFERVKQIDPIKG--HSALINARRFPED-VETLDKM 428 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 K +A +L + + + ++ A ++ + Sbjct: 429 AAAAKQPSIEGSLKAGILFQLASAWEKRKEFDKAFGFANQANAASKQFLP 478 >gi|326471293|gb|EGD95302.1| pre-mRNA splicing factor prp1 [Trichophyton tonsurans CBS 112818] Length = 937 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G++++ +R +A + Sbjct: 578 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 636 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230 P+ + A V+ + +A L+ ++ A NR+ A+ L+ Sbjct: 637 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 696 Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + L+ G + + + C S+ + A++ Sbjct: 697 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 756 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E L +A L +E S ++ S+ Sbjct: 757 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 814 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + + + K+ +F+ +A+I +K + W + A+ A D Sbjct: 815 SIWHLESRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 872 >gi|182415050|ref|YP_001820116.1| tetratricopeptide TPR_4 [Opitutus terrae PB90-1] gi|177842264|gb|ACB76516.1| Tetratricopeptide TPR_4 [Opitutus terrae PB90-1] Length = 514 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 11/197 (5%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + A+ +A+ ++P A + + Y ++ ++A L Q + N Sbjct: 197 REHRDRARALFERAIQVNPAAFDAYQLLSALYFKQEQPAQARDLLEQARPRLAPANPTAW 256 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + R+ G + A E L L +S +L + A E Sbjct: 257 FTYLCRAYRLL--GQPAEAERVAREGLALKSDSPELLEALGLALADLGRHTDAVPAYETA 314 Query: 287 WKVNPHPE-----IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 NP+ +A L ++ + L R+L L +L++ ++I + Sbjct: 315 LGRNPNDASINYNLAVSLLALRRLDDVLAALDRSLTL---QPAFPPTLLLRARIEMAAAH 371 Query: 341 IDQAHAKAMLAMKIAPR 357 +A ++ P Sbjct: 372 WPEAETYLRPLIESHPD 388 >gi|110761280|ref|XP_623891.2| PREDICTED: pre-mRNA-processing factor 6-like [Apis mellifera] Length = 931 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 29/149 (19%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GD+ +A+ + A +P++ + A V+ E+ RA L + + +A Sbjct: 610 AGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMK 669 Query: 227 I-----------------------------LLIARSLENADKGDMIASYHDAIESLKLCD 257 L + + +G++ + +++K C Sbjct: 670 SAKLEWALNNLDAALLLLKEALEAFDDFPKLWLMKGQIEEQQGNLDKALETYNQAIKKCP 729 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKI 286 NSI A+ + + KA +LEK Sbjct: 730 NSIPLWRLLAQLEHRKGQVTKARSVLEKA 758 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLW- 335 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + +S++ S+ I AA KR + K Sbjct: 336 -------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETETKAKR---RVYRKA 385 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SV+ + ++++ + D A Sbjct: 386 LEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYDNA 438 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 439 RKVLNKARENIPTDRQIWTTAAKLEEANGN 468 Score = 36.8 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 12/225 (5%) Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G L A+ AL P + W+ A ++ L + A Sbjct: 541 QQGALECARAVYAYALSTFPSKKSIWLRAAYFEKT------YGTRESLESLLQRAVAHCP 594 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L + + GD+ A+ + + NS + A K ++ +A +L Sbjct: 595 KSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLL 654 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE--MGSI 341 K P P + L L E + + + K +E G++ Sbjct: 655 AKARASAPTPRVMMKSAKLEWALNNLDAALLLLKEALEAFDDFPKLWLMKGQIEEQQGNL 714 Query: 342 DQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 D+A A+K P ++ LLAQ+E K + A Sbjct: 715 DKALETYNQAIKKCPNSIPLWRLLAQLEHRKGQ-VTKARSVLEKA 758 >gi|190890790|ref|YP_001977332.1| hypothetical protein RHECIAT_CH0001173 [Rhizobium etli CIAT 652] gi|190696069|gb|ACE90154.1| hypothetical protein RHECIAT_CH0001173 [Rhizobium etli CIAT 652] Length = 479 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 67/228 (29%), Gaps = 37/228 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149 G++ AA + A+ Y+ + + + + + A + Sbjct: 251 GVILKAAGDRTAAQ--ARYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCR 308 Query: 150 PA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQ----QYVL 200 P + L+ E GD A + +AL + P ++ Sbjct: 309 PDHVDALLRLAGLFDE---WGDQFEAHHHFREALRLRPGFAEAHNNFGVFLEKNGDAQAA 365 Query: 201 AKEWSRAIT--------------FLNQKKKNAKEWNRNRAILLIARSLE--------NAD 238 + +A+ L + A E + A+ + E + Sbjct: 366 ESHYRQALQLRSDYAEAHYNYAMLLEGRDVEAAESHYRAALSSLPMYAEAHNNLGVLLHE 425 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 KG +I + + +++L + A L + ++ +A+ K Sbjct: 426 KGALIEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQADRYARKA 473 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 72/221 (32%), Gaps = 19/221 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD +AQ A+ + P P A Q K + Sbjct: 255 KAAGDRTAAQARYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCRPD--HV 312 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+L +A + + GD ++H E+L+L A L + AE Sbjct: 313 DALLRLAGLFD--EWGDQFEAHHHFREALRLRPGFAEAHNNFGVFLEKNGDAQAAESHYR 370 Query: 285 KIWKVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ + A + RA L + E+ + + E Sbjct: 371 QALQLRS--DYAEAHYNYAMLLEGRDVEAAESHYRA-ALSSL-PMYAEAHNNLGVLLHEK 426 Query: 339 GSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHN 374 G++ +A + + A+++ P + + LLLA + + + Sbjct: 427 GALIEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQAD 467 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 25/242 (10%), Positives = 66/242 (27%), Gaps = 23/242 (9%) Query: 131 LAERQYNIAHEKLE-------MMLQIPATREFA----VYSLYFESCRIGDLNSAQRYATK 179 + + + R A + +L + K Sbjct: 176 ELKGDFLPRRHLYRVVSVDRTALAARSEERMTAEDWFLKGAGMAGADEKELAEERHCYEK 235 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL++ + P + A + T + +A ++ + Sbjct: 236 ALELRANYPEANNNLGVILKAAGD----RTAAQARYLDAIRLWPQYPEAHYNFAILLEET 291 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 G + ++LK + + A + A + +A + ++ P H Sbjct: 292 GRPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHHFREALRLRPGFAEAHNN 351 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ + + L ++ + E+ + + LE ++ A + A+ Sbjct: 352 FG-VFLEKNGDAQAAESHYRQAL-QLRSDYAEAHYNYAML-LEGRDVEAAESHYRAALSS 408 Query: 355 AP 356 P Sbjct: 409 LP 410 >gi|24212838|ref|NP_710319.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] gi|24193495|gb|AAN47337.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai str. 56601] Length = 1197 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 67/179 (37%), Gaps = 5/179 (2%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 +Y G + + +A+ + + F E VY ++ + + E + L Sbjct: 419 IYEGDRHLRKGDTKIAKTFYEKAKK--AFEQEPSVYNAFGRLHFISGELKASEENFKKAL 476 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 I A+ L + A +Y + +++ + P + + Y KE+ +A Sbjct: 477 SIDKQNIPALQGLIRLYSSQKNQTLANQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536 Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 L +K N + N A+L SLE +K + ++ + ++ KL + + Sbjct: 537 ENVYKNLQKKFPNNEAINFRLAMLYYKISLEENEKNNHDSALNWISKAEKLSKDIPEIA 595 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 23/204 (11%), Positives = 57/204 (27%), Gaps = 41/204 (20%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-----------TREFAVYSLYFESCRI 167 + + A+ ++Y A E + TR + ++ R Sbjct: 192 PAQLNMQLGDAAVQLKKYEEAEVYFEEARKNDPELLSAKKSASVTRVASALENGNQAMRK 251 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW------ 221 + A + A+ P P + +L+ E+ A+ ++ Sbjct: 252 KNYKEAASHFQTAIQNDPKNPTPYIFLGNARILSGEYEAALKAFESSLALKSDYQEAISG 311 Query: 222 ---------NRNRAILLIARS---------------LENADKGDMIASYHDAIESLKLCD 257 N +++ ++ ++ L G+ + + +L Sbjct: 312 IAAVYYKTGNYRKSVAVLEKATSQFPNNAVYQNQMGLNMKALGEPAKALVYFTRAKELDP 371 Query: 258 NSIMASICAAKSLISQNKKRKAEV 281 + LIS+N+ + A Sbjct: 372 TFVEPVTNLVFLLISENRYKTARK 395 >gi|228469977|ref|ZP_04054893.1| TPR domain protein [Porphyromonas uenonis 60-3] gi|228308358|gb|EEK17196.1| TPR domain protein [Porphyromonas uenonis 60-3] Length = 659 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 69/195 (35%), Gaps = 20/195 (10%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A A ++Q+H E Y L +IAL + A E++ L I + Sbjct: 142 GAEQYERADSAALALTQRH--PKEARGYFLAAEIALRRQDTVAAEERIAEGLAIDSLSAA 199 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAI 208 L + GD A RY K+++ P+ + + +++++A+ Sbjct: 200 PYRMLSAIAYLRGDNKGALRYHDKSIEQDPNQASDYINRGLTRYKLKEYRGAMEDYNQAL 259 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + A+ R+L + GD+ + D +E ++L ++ A A Sbjct: 260 LL-----------TPHDAVARHNRALLRIEVGDLQGAREDLLEVVRLQPTNLTAHFNLAL 308 Query: 269 SLISQNKKRKAEVIL 283 + R A L Sbjct: 309 VQTQTGRYRDAIETL 323 >gi|293390070|ref|ZP_06634404.1| tetratricopeptide domain protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950604|gb|EFE00723.1| tetratricopeptide domain protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 396 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 88/290 (30%), Gaps = 55/290 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151 + A ++H + + E LL Q + + + A +M+ P Sbjct: 91 GEVDRALRIHQALDNSPHYSFEQ--KLLAKQ--QLAKDFMTVGFFDRAENLYILMVDEPE 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 +A AL V+ Q W +AI Sbjct: 147 ------------------------FAEGALQ--------QLTVIYQKTKE--WKKAINVA 172 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K A + N +++ +++LK+ + + AS+ A I Sbjct: 173 EKLAKIAPKANNVELAQYYCEYVQHLPADSKENRQQILLQALKVSPSCVRASMMLADLAI 232 Query: 272 SQNKKRKAEVILEK------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 Q + A LE+ + P + + Y L N + + L + Sbjct: 233 QQENYKSAVGFLEEILNQSPAYISEALPALKHCYQKL---NLLDNFELFLIKASRQNNNS 289 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSH 373 +++++++ E A K ++ P IF + QI+ A Sbjct: 290 SVVLMLAELIEEKDGYSAAQLKLYQQLQQNPSTPIFHRFIQYQIDDAEQG 339 >gi|212528810|ref|XP_002144562.1| mRNA splicing factor (Prp1/Zer1), putative [Penicillium marneffei ATCC 18224] gi|210073960|gb|EEA28047.1| mRNA splicing factor (Prp1/Zer1), putative [Penicillium marneffei ATCC 18224] Length = 942 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 112/334 (33%), Gaps = 47/334 (14%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI----P 150 IA AR +++Y + L A ER + +++ + P Sbjct: 553 IARGKYETARAIYAYALRVFVTSK---TLWLAA--ADLERNHGTKEALWQVLEKAVEACP 607 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + L E + G++++A+ +A +P+ + A V+ A+E A Sbjct: 608 QSEVLWMQ-LAKEKWQAGEIDNARLVLKRAFARNPNNEDIWLAAVKLETDAQETEHAREL 666 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKG-----------------------------D 241 L+ ++ A + R L N D+ Sbjct: 667 LSTARREAGTDRVWIKSVAFERQLGNMDEALDLVNQGLQLYPKADKLWMMKGQIYESQKK 726 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + + C S+ + A++ KA IL++ P+ A ++T Sbjct: 727 YPQAREAYGTGTRACPQSVPLWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWTE 784 Query: 302 -LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPR 357 + E + +A L +E S ++ ++ LE + + + K+ Sbjct: 785 SVRVERRASNISQAKVLMAKALQEVPNSGLLWAESIWHLEPRTHRKPRS-LEAIKKVEND 843 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F+ +A+I +K + W + ++ A D Sbjct: 844 PILFVTVARIFWDERR-LEKAMTWFEKSILADSD 876 >gi|156744127|ref|YP_001434256.1| hypothetical protein Rcas_4211 [Roseiflexus castenholzii DSM 13941] gi|156235455|gb|ABU60238.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941] Length = 522 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 60/171 (35%), Gaps = 15/171 (8%) Query: 200 LAKEWSRAITFLNQKKK--------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 L +++ AI A+ ++R RAI+ + A + D + + +E Sbjct: 41 LRADYANAIEHFKAALIAAYIEGEERAQIYDRERAIIYLYIGNALAYQEDWEGALREYLE 100 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 +++ A + +Q + +A ++ + NP H + Y L ++ Sbjct: 101 AVQTDPQLSEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNPRLYEAHFSLGRCYQRL--DD 158 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + ++ E + + G+ + A A+++ P Sbjct: 159 AGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 95/280 (33%), Gaps = 27/280 (9%) Query: 106 MHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY-SLY 161 ++ HN L + + A+ + P E Y L Sbjct: 127 RAIAAFKEAIEHNPRLYEAHFSLGRCYQRLDDAGRAYIHYDQACQARPQAAEPRYYMGLM 186 Query: 162 FESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAK--EWSRAITFLNQKKKN 217 + G AQR +AL + P +P + + V+ + +W ++ +++ Sbjct: 187 HQ--SHGAHELAQRCFAEALRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGY 244 Query: 218 AKEWNRNRAILLIARSLENADK---GDMIASYHDAIESLKLCDNSIM-------ASICAA 267 +E R LL R E+ + G+++A E+L+ A I + Sbjct: 245 EEEAERIYRALLQWRPEEHYARYLLGNLLARARRLDEALEEYAQIPPQDKYYVDARIRIS 304 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINK 322 L QNK R+A L + HP ++ ++ G +K R ++ Sbjct: 305 AILKLQNKTREAYDTLFEC--ARLHPANGQLFLNMGKLLYDMNKHAGAIKAFERAVQLLP 362 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 ++ ++ + MG A A A+++AP Sbjct: 363 NDPQAHYLLGFMYNLMGREGWALAAWRKAVELAPDAHSLR 402 Score = 36.5 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 57/201 (28%), Gaps = 29/201 (14%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D A R +A+ P + + RAI + ++ A Sbjct: 88 QEDWEGALREYLEAVQTDPQLSEAHYNLGVAFAAQGRLDRAIAAFKEAIEHNP--RLYEA 145 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + R + D D +Y ++ + + S A+ + Sbjct: 146 HFSLGRCYQRLD--DAGRAYIHYDQACQARPQAAEPRYYMGLMHQSHGAHELAQRCFAEA 203 Query: 287 WKVNPH---PEI-------------ANIYTHLLS-------ENTVGKLKRALRLEEINKE 323 +V P PE+ A Y L + E ++ RA L + E Sbjct: 204 LRVEPTFVSPELQDEVLVNRSEEEVAQWYYRLSNDLKQQGYEEEAERIYRA--LLQWRPE 261 Query: 324 SVESLVIVSKIALEMGSIDQA 344 + ++ + +D+A Sbjct: 262 EHYARYLLGNLLARARRLDEA 282 >gi|67920836|ref|ZP_00514355.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856953|gb|EAM52193.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 380 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 21/273 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + N A K + + N Y L +A N A + P Sbjct: 100 GYLHSKQGNHSAAVKYYQKALSLDSS-NPNFYYALGDSLANVGDNNNAASAYYYAIQLNP 158 Query: 151 ATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + + L R D A + + + P+ P + + K+ +A+ Sbjct: 159 --KFVKSYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQ 216 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +L + R +L A +G + + ++ +I + A+ Sbjct: 217 YLGNAVQRFPRDVDLRLLLATAY----LQQGQLELGKEHLKRAERVDPRNIKVQLKIARI 272 Query: 270 LISQNKKRKAEVILEKIW---KVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEIN 321 Q+ +A I + + NP + L ++ +G L EI Sbjct: 273 YEVQDNLDEALNIYRSVSFFNRKNP-----EAFAGVGRIQLAQKDYLGATITYQDLIEII 327 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E + E +A A K+ Sbjct: 328 PQNPEPYYYLGMAFKERNRNGEAKKALDYAKKL 360 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 40/246 (16%) Query: 135 QYNIAHEKLE--MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y A + L + F+ Y S + G+ ++A +Y KAL + P Sbjct: 74 DYQRAIAIYQQAASLDTDNAKIFSGIG-YLHS-KQGNHSAAVKYYQKALSLDSSNPNFYY 131 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ + + A + + ++ ++ I + + D + Sbjct: 132 ALGDSLANVGDNNNAASAYYYAIQLNPKFVKS----YIGLGVVLLRQEDYEGAAEAYKRV 187 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 + L N+ A SL+ Q + +A L N V + Sbjct: 188 IALDPNNPEAFAIMGSSLLQQKQLDQALQYL---------------------GNAVQRFP 226 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQAN 371 R + L ++++ L+ G ++ A ++ PR ++ L +A+I + Sbjct: 227 RDVDL----------RLLLATAYLQQGQLELGKEHLKRAERVDPRNIKVQLKIARIYEVQ 276 Query: 372 SHNTDK 377 + + Sbjct: 277 DNLDEA 282 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 28/205 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLE---------------NADKGDMIASYHDAIESL 253 L + + + + + RAI + ++ ++ +G+ A+ ++L Sbjct: 61 DLLRRGRDHVDKRDYQRAIAIYQQAASLDTDNAKIFSGIGYLHSKQGNHSAAVKYYQKAL 120 Query: 254 KLC---DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSE 305 L N A SL + A ++N P+ Y L E Sbjct: 121 SLDSSNPNFYYA---LGDSLANVGDNNNAASAYYYAIQLN--PKFVKSYIGLGVVLLRQE 175 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + G + R+ ++ + E+ I+ L+ +DQA A++ PR LL Sbjct: 176 DYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVQRFPRDVDLRLLL 235 Query: 366 QIEQANSHNTDKILYWTQSALHAMP 390 + + A P Sbjct: 236 ATAYLQQGQLELGKEHLKRAERVDP 260 >gi|170726662|ref|YP_001760688.1| tetratricopeptide repeat-containing protein [Shewanella woodyi ATCC 51908] gi|169812009|gb|ACA86593.1| Tetratricopeptide domain protein [Shewanella woodyi ATCC 51908] Length = 386 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 32/217 (14%) Query: 168 GDLNSAQRY--ATKALDI---SPDAPWVTEA-VVQQYVLAKEWSRAITFLNQ-KKKNAKE 220 D +A Y A + D V E ++ Y + K+W +AI + K+K + Sbjct: 115 KDYQAAGFYDRAEEIFLNLVKQEDHSEVAEEHLIDIYQITKDWQKAINIIKTLKRKRQQC 174 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + N A + E + + + AI KL N A + A+ + + K Sbjct: 175 FKHNTAHFYCELADEETESSEQVKLLQSAI---KLDSNCARALLTLARQYLELGEFAKCI 231 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA----- 335 +L K + + L+ + + ++ + + +S+ A Sbjct: 232 EMLTK---------LIDADIDLVPDALSTAKQAFIKKGDQVGYCEYLRLALSEGAGASVA 282 Query: 336 -------LEMGSIDQAHAKAMLAMKIAPRKEIFL-LL 364 +E G +A + + P + F L+ Sbjct: 283 VNLAHNLIEQGEHKEAEKLILDGLYRNPTMKSFQHLM 319 >gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102] gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 409 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 84/259 (32%), Gaps = 14/259 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A + + + A ++L R+ L A KAL + P+ Sbjct: 90 ANTLDDQGKPQEAIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLEPN 149 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+T + + A D+G++ + Sbjct: 150 YADAHYNLGNALYTQGKLTEAVTEYTAAIRLKPSY----APTYTRLGNALYDRGELAEAV 205 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANI-YT 300 +S+ A +L +Q K +A +++P +P + N Y Sbjct: 206 TQYKKSISFDPKYADAHYYLGNALYAQGKSAEAIAEYTAAIRLSPKNPAGYNALGNTLYA 265 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KE 359 E + + K+AL LE ++ ++ G + +A A++I P+ + Sbjct: 266 QGKLEEAIAQYKQALNLE---PNYADAHYNLASAFYAQGKLTEAITDYTEAIRIDPKHAQ 322 Query: 360 IFLLLAQIEQANSHNTDKI 378 + LA + I Sbjct: 323 AYTGLANAMDDQGKPQEAI 341 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 11/196 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + GD A+ KA+++ P+ A+ + AI + KK + + + + Sbjct: 61 KQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIA--HYKKAISLDPHDSG 118 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + +L ++ + + + ++L L N A +L +Q K +A Sbjct: 119 AYFNLGLTLARLNQLEPAIAQYK--KALSLEPNYADAHYNLGNALYTQGKLTEAVTEYTA 176 Query: 286 IWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 ++ P A YT L + + + + + + ++ + G Sbjct: 177 AIRLK--PSYAPTYTRLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNALYAQGK 234 Query: 341 IDQAHAKAMLAMKIAP 356 +A A+ A++++P Sbjct: 235 SAEAIAEYTAAIRLSP 250 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 27/227 (11%), Positives = 70/227 (30%), Gaps = 7/227 (3%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A +++ A +L G A + KA+ + P Sbjct: 62 QGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIAHYKKAISLDPHDSGAYF 121 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + AI + + E N A + +L +G + + + + Sbjct: 122 NLGLTLARLNQLEPAIAQYKKAL--SLEPNYADAHYNLGNALYT--QGKLTEAVTEYTAA 177 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVG 309 ++L + +L + + +A +K +P A+ Y + Sbjct: 178 IRLKPSYAPTYTRLGNALYDRGELAEAVTQYKKSISFDPKYADAHYYLGNALYAQGKSAE 237 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ ++ + G +++A A+ A+ + P Sbjct: 238 AIAEYTAAIRLSPKNPAGYNALGNTLYAQGKLEEAIAQYKQALNLEP 284 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 9/138 (6%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ +GD + ++++L N + A I A +L Q K ++A +K Sbjct: 49 AVANFEEGSNLYKQGDFKGAEVAFRKAIELEPNFVQAYIALANTLDDQGKPQEAIAHYKK 108 Query: 286 IWKVNPHP-----EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 ++PH + L E + + K+AL LE ++ + G Sbjct: 109 AISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLE---PNYADAHYNLGNALYTQG 165 Query: 340 SIDQAHAKAMLAMKIAPR 357 + +A + A+++ P Sbjct: 166 KLTEAVTEYTAAIRLKPS 183 Score = 39.1 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 6/189 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + + L + A + + + A Sbjct: 165 GKLTEAVTEYTAAIRLKPSYAPTYTRL--GNALYDRGELAEAVTQYKKSISFDPKYADAH 222 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y L G A T A+ +SP P A+ + AI + K Sbjct: 223 YYLGNALYAQGKSAEAIAEYTAAIRLSPKNPAGYNALGNTLYAQGKLEEAI----AQYKQ 278 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A N A + +G + + D E++++ A A ++ Q K + Sbjct: 279 ALNLEPNYADAHYNLASAFYAQGKLTEAITDYTEAIRIDPKHAQAYTGLANAMDDQGKPQ 338 Query: 278 KAEVILEKI 286 +A +K Sbjct: 339 EAIAHYKKA 347 >gi|269838348|ref|YP_003320576.1| hypothetical protein Sthe_2333 [Sphaerobacter thermophilus DSM 20745] gi|269787611|gb|ACZ39754.1| Tetratricopeptide TPR_2 repeat protein [Sphaerobacter thermophilus DSM 20745] Length = 826 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 46/331 (13%), Positives = 106/331 (32%), Gaps = 52/331 (15%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL ++ +A + A ++ RA+ Q + + +L A ++ Sbjct: 3 ALLLAEAVQQAQDA-----IGAGDYRRAVETCRQVLHSYPDCVTAHRLLGEAY----LEQ 53 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANI 298 D ++ +L+ + A + ++ + KA + W++ P ++ Sbjct: 54 RDEASAERAFTAALQRDPQCVGAYVGLGLIAETRREPEKALAFFQAAWEIAPTRNDLRER 113 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVES-----------------------LVIVSKIA 335 L S+ + + L + ++ + +++ Sbjct: 114 VVRLASDTYGPEGRLQLTRAALGSIHYQAGRWGRAVNECAAVLAEYPGRVDVRLRLAEAL 173 Query: 336 LEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 G ++A A ++ +P +LLA IE+ ++ + + + A DP Sbjct: 174 WRRGEWERAAANCRAVLEQSPGAFGALVLLADIERRLGNDEEAAK--LRERVRA-ADP-- 228 Query: 395 ISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454 DG ++ L P + +F P E ++ ++ PA D + Sbjct: 229 ---DGSRAAEMLAAVPD--RVDFFLPAEPPVVEE-LAEPAVDVERPRIGPAPDFTAP--- 279 Query: 455 GKKNHLPSIKKVSSFEDSTIHPLDPHIRQPD 485 + + +E P P PD Sbjct: 280 ----EIDETPPAAMWESVAPEPAIPVEDAPD 306 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 70/241 (29%), Gaps = 27/241 (11%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +A+ +I A + A + V H++ + + L + L +R A Sbjct: 8 EAVQQAQDAIGAGDYRRAVETCRQV--LHSYPDCVTAHRLLGEAYLEQRDEASAERAFTA 65 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-------------------- 185 LQ A L + + A + A +I+P Sbjct: 66 ALQRDPQCVGAYVGLGLIAETRREPEKALAFFQAAWEIAPTRNDLRERVVRLASDTYGPE 125 Query: 186 -DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 A+ + A W RA+ R L +A +L +G+ Sbjct: 126 GRLQLTRAALGSIHYQAGRWGRAVNECAAVLAEYP--GRVDVRLRLAEAL--WRRGEWER 181 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + + L+ + A + A +A + E++ +P A + Sbjct: 182 AAANCRAVLEQSPGAFGALVLLADIERRLGNDEEAAKLRERVRAADPDGSRAAEMLAAVP 241 Query: 305 E 305 + Sbjct: 242 D 242 >gi|262195270|ref|YP_003266479.1| serine/threonine protein kinase with TPR repeats [Haliangium ochraceum DSM 14365] gi|262078617|gb|ACY14586.1| serine/threonine protein kinase with TPR repeats [Haliangium ochraceum DSM 14365] Length = 884 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 63/236 (26%), Gaps = 47/236 (19%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA----------QRYATKALDISPD 186 + A + ML+ L A + A +A+ + P Sbjct: 519 DAAEALFQRMLRRDPDSAAGHAGLARAYWHRYAYADASRDPAFLQQTRALAERAVALDPL 578 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 ++ + + + +A + L + A + A + + Sbjct: 579 LADAHLSLGRVLLELGQLDQAESELRSALQ----LEPGNADAYYGMAHLYAHREQPAEAE 634 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSE 305 +++ + L ++ +Y L + Sbjct: 635 TAYRAAIERAPER--------RYLYD---------------------DLGALYVQLGRLD 665 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 T + +RA+ L +S+ + + L G A A+KI P ++ Sbjct: 666 ETAAQFERAIELA---PDSIYGYSNLGVVHLLAGRYQAAAEALQDALKIQPSASLY 718 >gi|238501958|ref|XP_002382213.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus flavus NRRL3357] gi|220692450|gb|EED48797.1| mRNA splicing factor (Prp1/Zer1), putative [Aspergillus flavus NRRL3357] Length = 938 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 120/335 (35%), Gaps = 47/335 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SIA AR +++Y F N ++L A ER + +++ + Sbjct: 549 SIARGKYETARAIYAYA--LRVFVNRRSIWL---AAADLERNHGTKEALWQVLEKAVEAC 603 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + E + L E + G+++ A+R +A + +P+ + A V+ A++ +A Sbjct: 604 PQSEELWLL-LAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADARQTDQARE 662 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240 L ++ A + R L NAD+ Sbjct: 663 LLATARREAGTDRVWVKSVAFERQLGNADEALDLVNQGLQLYPKADKLWMMKGQIYESQN 722 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + C S+ + A++ KA +L++ P+ A ++T Sbjct: 723 KYPQAREAYGTGTRACSRSVPLWLLASRLEEKAGAVVKARSVLDRARLAV--PKSAELWT 780 Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356 + E + +A L +E S ++ S+ LE + +A + K+ Sbjct: 781 ESVRVERRANNIAQAKILMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDN 839 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F+ +A+I +K + W + A+ + D Sbjct: 840 DPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 873 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 51/150 (34%), Gaps = 7/150 (4%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + +G + +L++ N + AA + K +LEK + P Sbjct: 546 AKASIARGKYETARAIYAYALRVFVNRRSIWLAAADLERNHGTKEALWQVLEKAVEACPQ 605 Query: 293 PEIANIYTHLLSE----NTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAK 347 E ++ L E + + +R L N + + + K+ + DQA Sbjct: 606 SE--ELWLLLAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADARQTDQAREL 663 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 A + A +++ E+ + + Sbjct: 664 LATARREAGTDRVWVKSVAFERQLGNADEA 693 >gi|39936977|ref|NP_949253.1| TPR repeat-containing protein [Rhodopseudomonas palustris CGA009] gi|39650834|emb|CAE29357.1| TPR repeat [Rhodopseudomonas palustris CGA009] Length = 715 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 92/275 (33%), Gaps = 11/275 (4%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 E V L+ ++ + Q + A + +L+ A++ + G+ + Sbjct: 19 YEPAVLLMRARVLHQQGQLDEARSAYKKVLKKAPDNFMALHFYALAEYQSGNAELGIKTL 78 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +AL P + + + ++ ++ ++ + R L + Sbjct: 79 KRALLADPKSAQAQSDMGSMLIAVGRFADSLASCDKAIAIDPTL----MLAYANRGLALS 134 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-- 295 + ++++L + +L + +A +K +++P ++ Sbjct: 135 ALARYEDAIASFDKAIELMPDRADTWNDRGNALHKLGRYTEALESYDKAIEIDPLSDVAF 194 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 A Y L + L R I K V++ + ++ L M ++ A A + Sbjct: 195 MNRAGTYKDLKQLDKA--LASYDRALSIGKRPVQAGLARAETLLFMRNVKDAMATCTAVL 252 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 K+ P I L L A+ + + + AL Sbjct: 253 KVEPNSAIALTLLGNCMASLGDAETAIALHSRALE 287 >gi|91203185|emb|CAJ72824.1| hypothetical protein kustd2079 [Candidatus Kuenenia stuttgartiensis] Length = 319 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 76/201 (37%), Gaps = 20/201 (9%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y L+ E+ K+L PD ++ + Y + S AI + K Sbjct: 58 YGLHNEAI---------ELFRKSLATDPDNIDTCISLGEVYADKRMDSEAIELFQKVLKI 108 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 N+ +A I + ++ + + +++++ + +A S K Sbjct: 109 NP--NQPQAYFKIGTVYFDMEEYEP--AIEYLKKTIEMNPDYKVAYSLLGISYAKSGKYD 164 Query: 278 KAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332 +A +L+K ++ P +A Y++L + + L + IN E+L ++ Sbjct: 165 EAVKVLKK--RIELDPNLAITYSNLGLVYTMKGSNKEALVEYNKALGINPYHEETLFNIA 222 Query: 333 KIALEMGSIDQAHAKAMLAMK 353 + MG ID+A A ++ Sbjct: 223 FLYENMGQIDEALAYYNKTVE 243 >gi|326478910|gb|EGE02920.1| bimA protein [Trichophyton equinum CBS 127.97] Length = 801 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 70/198 (35%), Gaps = 15/198 (7%) Query: 135 QYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 ++ A + Q+ + + E + + AQ A+ +P Sbjct: 591 DHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYSAWY 648 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + Y + + F + + A N +L+ + L + ++ A+ + Sbjct: 649 GLGKVYERMGK----LKFAERHLRTASNINSANVVLICSIGLVLERQNNLKAALLQYSRA 704 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLSENT 307 L +S++A + A++L+ N+ A +L+ + P H + +Y + + Sbjct: 705 SSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQDKGN 764 Query: 308 VGKLKRALRLEEINKESV 325 +K ++ ++ Sbjct: 765 A--IKHFTTALNLDPKAA 780 >gi|258592527|emb|CBE68836.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 622 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 94/302 (31%), Gaps = 23/302 (7%) Query: 99 NIPLARKMHSYVSQQHTFHNE--YLVYLLEVQIALAERQYNIAHEKLEMMLQI----PAT 152 ++P R+ + + ++ + ++ E + A L + PA Sbjct: 170 DLPAKRQRNIRLLKRQLTDHPEDPSAQFHLGEVYALEGKVGEAIACYRTALSLRGLPPAN 229 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 R A SL G A + AL+ + AI ++ Sbjct: 230 RSVARRSLAACLLNRGRFEEAWQECVAALEEDQGYAMPHLTGALALGRLGRYEAAIRQID 289 Query: 213 QKK-KNAKEWNRNRAIL------LIARSLE---NADKGDMIASYHDAIESLKLCDNSIMA 262 K +++ +L ARSL+ G + + +L +S A Sbjct: 290 LYLDKVSRQGRGIHGVLGHISNPAYARSLKGNYLFALGQVDRAADCYTAALADDPDSPEA 349 Query: 263 SICAAKSLISQNKKRKAEVILEKI---WKVNPHP--EIANIYTHLLSENTVGKLKRALRL 317 + K + + + A LEK ++ PH +A Y L L + Sbjct: 350 HLGMGKVHKLRGQAQDAAASLEKAATLFERIPHGRLTLAECYAEL--GKWTEVLAACEQF 407 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + + L + ++ L++ + +A + AP + LA + S+ + Sbjct: 408 LQACPDDKGGLELQAQALLKLNRLTEAEVTYRRLVTEAPSAMAYFALACLADGKSNRKEA 467 Query: 378 IL 379 Sbjct: 468 AR 469 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 71/265 (26%), Gaps = 44/265 (16%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 N L+ A Q + A + + P + E + R ++A Sbjct: 311 NPAYARSLKGNYLFALGQVDRAADCYTAALADDPDSPEAHLGMGKVHKLRGQAQDAAASL 370 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 KA + P + + Y +W+ + Q + + + A N Sbjct: 371 -EKAATLFERIPHGRLTLAECYAELGKWTEVLAACEQFLQACPDDKGGLELQAQALLKLN 429 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNPHPEI 295 + E+ + A L RK A K W++ Sbjct: 430 RLTEAEVTYRRLVTEAPSAM------AYFALACLADGKSNRKEAARFCRKAWEL------ 477 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 E + ++ ++ +E G +A + A ++A Sbjct: 478 ---------ERSDARI----------------PFLLGCCLIEAGEYREALDALLEAERLA 512 Query: 356 P----RKEIFLLLAQIEQANSHNTD 376 P + LLA+ Q H Sbjct: 513 PGTPEIERRLRLLARFVQRERHEVG 537 >gi|239995106|ref|ZP_04715630.1| TPR domain protein [Alteromonas macleodii ATCC 27126] Length = 604 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 79/205 (38%), Gaps = 16/205 (7%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + R+ + A++Y K L + P ++ A+ Y+ + A++ QK Sbjct: 52 GSLRQVQRVKE---AEKYLVKGLKKFKNHPELSNALGNLYLSTRRIDLAVSTF-QKSSEL 107 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 N + L + +K + + A + L L N + + A Q+ + Sbjct: 108 APNNVDLNYNL---ARALIEKNALKQARIAAEKVLALVPNHVQTKLIMADIFSKQSDFNE 164 Query: 279 AEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVS 332 A ++L+ + ++P IAN+Y + E+ LK L + N + Sbjct: 165 AIIVLKDVLAISPENIVALNNIANLYRKI--EDYEQALKHFELALSKTNANPTILRNYAA 222 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 +AL ++A + A+K+AP Sbjct: 223 VLALSNQ-RERAEMVYLKALKVAPS 246 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 91/297 (30%), Gaps = 20/297 (6%) Query: 92 LMSIAAHNIPLARKMHSYVSQQ------HTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 + + ++ +++ + ++ L L + L+ R+ ++A + Sbjct: 46 FIQLFCGSLRQVQRV-KEAEKYLVKGLKKFKNHPELSNAL-GNLYLSTRRIDLAVSTFQK 103 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ++ Y+L L A+ A K L + P+ + + +++ Sbjct: 104 SSELAPNNVDLNYNLARALIEKNALKQARIAAEKVLALVPNHVQTKLIMADIFSKQSDFN 163 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--AS 263 AI L + E N + + D + + A+ + A+ Sbjct: 164 EAIIVLKDVLAISPE-NIVALNNIANLYRKIEDYEQALKHFELALSKTNANPTILRNYAA 222 Query: 264 ICAAKSLISQNKK--RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 + A + + + KA + W++ E+A L E + Sbjct: 223 VLALSNQRERAEMVYLKALKVAPSDWELQE--ELAKF---LWEEGVDAPFVHIESYIKRQ 277 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDK 377 E ++ ++ A + L A EI L A++ + + + Sbjct: 278 PEDDSFRFRFIQLLIQADEYHAAKEQLDLLTTEAIKTHEIAPLRARVLR-ELGDYEA 333 >gi|315295811|gb|EFU55128.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3] Length = 1157 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273 + +L + + + E +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ I + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K I + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738 >gi|163848374|ref|YP_001636418.1| hypothetical protein Caur_2828 [Chloroflexus aurantiacus J-10-fl] gi|222526297|ref|YP_002570768.1| tetratricopeptide repeat-containing protein [Chloroflexus sp. Y-400-fl] gi|163669663|gb|ABY36029.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus J-10-fl] gi|222450176|gb|ACM54442.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl] Length = 1113 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 47/281 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G++++A ++ A++ ++ +LL Q+A ++ A ++ Sbjct: 553 GMVALARNDRESAQQWLRQALDRNNRFFPA--HLLLAQVAEDTGDWSSAINHWRALVNWQ 610 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T V L R G A +A + P A EA ++ Sbjct: 611 ETPYT-VVHLARALRRSG----ASGFAEAERLLVPLATEHVEATIEL------------- 652 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + D G + ++L L S +A+ ++ Sbjct: 653 ----------------------ARLYNDAGYPNEAASVYRDALVLDPRSTVAAFELGETY 690 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVE 326 I AE +L + A + L E + + RA+ I ++ Sbjct: 691 IRLGDVATAERMLRDALTFDERNLDARLRLAELYEGPLNQPDRAIEQYRIALGQGVNDLD 750 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQ 366 L+ + + AL + A A+ P + LLA+ Sbjct: 751 QLIRIGQAALAGNATTVAIQALERALTGNPESATVNQLLAR 791 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 82/291 (28%), Gaps = 50/291 (17%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT--- 178 +L +IA A + + + A L + G+ A Y Sbjct: 828 AFLALAEIARRRNDLAAAEQAYQQAIATDPQSIPAHIGLGELAGGQGNWGVALAYFETAA 887 Query: 179 ---------------------------------KALDISPDAPWVTEAVVQQYVLAKEWS 205 +AL++ P P + Q Sbjct: 888 ALPGGDTNAAAQFWLGEALLRNDNLVRALAAYQRALELQPQYPEALLGLAQTQYALGRAE 947 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ + + + + A + R + G + ++ D + Sbjct: 948 EALQTVERAIQQKSNY----AEAHLFRGKLLQEAGRFAEARAAYDAAIGANDRIAESFYR 1003 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANI-YTHLLSENTVGKLKRALRLEE 319 A I + +A L + + + PE + Y SE+ + +++A+ L Sbjct: 1004 RALLAIRNGEYDQAIRDLNRATALQANFPEAYYWLGRAYYAQGRSESALQAIQQAITL-- 1061 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369 N E++ IA + + A + P E LAQIE+ Sbjct: 1062 -NPNYSEAIFYSGLIAEDQANFAAARDAYQTLISREPTSEWGQRALAQIER 1111 >gi|119331064|ref|NP_001073234.1| pre-mRNA-processing factor 6 [Rattus norvegicus] gi|118764149|gb|AAI28780.1| PRP6 pre-mRNA splicing factor 6 homolog (S. cerevisiae) [Rattus norvegicus] gi|149033912|gb|EDL88695.1| similar to RIKEN cDNA 1190003A07 (predicted) [Rattus norvegicus] Length = 941 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 103/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNITAAQE 696 Query: 229 LIARSL--------------ENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + ++G+ M + + LK C +S + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|190337484|gb|AAI63421.1| Prkri protein [Danio rerio] gi|190339858|gb|AAI63418.1| Prkri protein [Danio rerio] Length = 502 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 61/179 (34%), Gaps = 19/179 (10%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A + + A++ + E + + R+ G ++ D ++++L + Sbjct: 54 AAGQLAEALSHYHSAV----EGDSKNYLTYYKRATVFLAMGKSKSALPDLTQAIQLKPDF 109 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI-YTHLLSENTVGKLKR 313 + A + L+ Q ++A + + +P H ++ L E +R Sbjct: 110 LAARLQRGNILLKQGSTQEAREDFQAVLNHSPDHEEAHDQLLKADKLESLQEEAHEAHRR 169 Query: 314 ---------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + E++ ES + ++ +++G +A A ++ L Sbjct: 170 GDCRIAVQVLEHVIELSPWDPESRELRAECYIQLGEPRKAIMDLTPASRLRADNRAAFL 228 >gi|284050424|ref|ZP_06380634.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] gi|291571117|dbj|BAI93389.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 730 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 6/205 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + N VY+ ++ Q A L+ A Sbjct: 31 GDYDQA--IAACQKALELKPNWPPVYVTMGNVSQGRGQIQEAIRYYAKALEFDPNLPQAH 88 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L SA KA+ + PD V + + S A+ ++K + Sbjct: 89 ANLGSMFYKQGQLESAIASYQKAIALKPDLTAVYVNLARALRQLGRESEALIV--EQKAH 146 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + AI L + + ++G + + +++ N A Q + + Sbjct: 147 QINSSTGGAIHLYNQGNQLVNEGKLEEAIALWKQAIVADPNLAEAYCQIGIIHRHQGQPK 206 Query: 278 KAEVILEKIWKVNPHPEIANIYTHL 302 +A LEK ++ P Y ++ Sbjct: 207 EAIPFLEKAIELK--PNFIAAYQNI 229 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 9/195 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GD + A KAL++ P+ P V + + AI + + + + A Sbjct: 30 QGDYDQAIAACQKALELKPNWPPVYVTMGNVSQGRGQIQEAIRYYAKALEFDPNLPQAHA 89 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L +G + ++ +++ L + + A++L ++ +A ++ +K Sbjct: 90 NL----GSMFYKQGQLESAIASYQKAIALKPDLTAVYVNLARALRQLGRESEALIVEQKA 145 Query: 287 WKVNPHPEIA-NIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSI 341 ++N A ++Y GKL+ A+ L + E+ + I G Sbjct: 146 HQINSSTGGAIHLYNQGNQLVNEGKLEEAIALWKQAIVADPNLAEAYCQIGIIHRHQGQP 205 Query: 342 DQAHAKAMLAMKIAP 356 +A A+++ P Sbjct: 206 KEAIPFLEKAIELKP 220 >gi|224047792|ref|XP_002190494.1| PREDICTED: tetratricopeptide repeat domain 13 [Taeniopygia guttata] Length = 840 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 133 NGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEPDH 192 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + S A++ L + + R+R L D + Sbjct: 193 PEVFEQRAEILSPLGRISEALSDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 245 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 246 HEDFQRSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAY 304 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + + +N+ V++L + + GS+D+A +++ P E Sbjct: 305 RELGNFDAAT--ESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNE 362 Query: 360 IFLLL 364 + + Sbjct: 363 VCQYM 367 >gi|222099856|ref|YP_002534424.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM 4359] gi|221572245|gb|ACM23057.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga neapolitana DSM 4359] Length = 367 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 7/152 (4%) Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L ++ + K++ L +LE AD+ ++ L + N A L Sbjct: 92 LEEEDISVKDFKNVSLKGLYDLALEYADRNLYDVAHDIIKFMLDIDSNYAPAYELKGSLL 151 Query: 271 ISQNKKRKAEVILEKI-----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + Q K + L+K W V + + Y +L + + R E + Sbjct: 152 VEQGKIEEGIKYLDKAVEIDPWLVQAYASLGEAYYNL--GDYEKAVHYWERELEYAPDDK 209 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++++ EM D A ++ P Sbjct: 210 LTYFVLAEAYQEMNRKDLAARTLERLLERDPS 241 >gi|126741355|ref|ZP_01757031.1| Tetratricopeptide TPR_2 [Roseobacter sp. SK209-2-6] gi|126717560|gb|EBA14286.1| Tetratricopeptide TPR_2 [Roseobacter sp. SK209-2-6] Length = 831 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 79/222 (35%), Gaps = 8/222 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD + + + + + AVV + A+ L Q K + + Sbjct: 270 QSRGDFETLEAFLRERAGPVEENFEGHMAVVALLAQTQGQEAALAELVQLAKANEASDLG 329 Query: 225 RAILLIARSLENADKGDMIASYH-DAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVI 282 R LL L + I + + + A + ++ + + +A + Sbjct: 330 RQYLLQQMQLRFQAGEHEASMAEVTEIVAQGKDPDLVNEARMLLSRMKAATGDQEEARRL 389 Query: 283 LEKIWKVNPH--PEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + + + + P + A H+ + + + + +L+++++ +MG Sbjct: 390 VAAVLESDASNVPALSAQAAWHIREDKLSEAITGLRHALDQEPRNANTLLLLAEAQQKMG 449 Query: 340 SIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNTDKI 378 +++ A + A++I APR+ + QI + D++ Sbjct: 450 NVELAEQRLAQAVEITNGAPREALVYARFQIARGQLAAADRV 491 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 3/93 (3%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL--SENTVGKLKRALRLEEINKE 323 A +L+ + +A V L ++ N H E +Y L+ + + LRL E + Sbjct: 55 ALALLEEGDTDRALVELRNVFDNNGLHREARQLYADLVLARGDAQEAYGQYLRLVEQYPD 114 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +VE + ++++AL++G+ ++ A+++AP Sbjct: 115 AVEVRLQLAELALDLGNWEEVKRHGGAAIELAP 147 >gi|58337268|ref|YP_193853.1| O-linked transferase [Lactobacillus acidophilus NCFM] gi|227903853|ref|ZP_04021658.1| tetratricopeptide repeat family protein [Lactobacillus acidophilus ATCC 4796] gi|58254585|gb|AAV42822.1| putative O-linked transferase [Lactobacillus acidophilus NCFM] gi|227868740|gb|EEJ76161.1| tetratricopeptide repeat family protein [Lactobacillus acidophilus ATCC 4796] Length = 415 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 97/263 (36%), Gaps = 30/263 (11%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172 F +E L + +I L + + + L ++ +P + SL ++ G + + Sbjct: 62 FPHEDLFKVYLAEILLNDGEEDD---GLSLLYSVPEGSSAYLDSLLVQADYYQTSGLIET 118 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAIL 228 A+ +AL I+P+ V + + L+ ++ +A+ + + R Sbjct: 119 AKDKLLQALKIAPEEDAVKFGLAELDYLSGDYEQALALYEDLIQRQNVFGEIDLNQRLFA 178 Query: 229 LIARSLENADKGDMIASYHDAIESL--KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 A+ D+I D+I + K +M S+ +A L+++ Sbjct: 179 TNAKLGNYEKAADIIKKRGDSILDIDSKYEAGLVMLSV---------GDDDRAIKFLDEV 229 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGS 340 + +P +P +A Y H + L+ A N E E+L + ++ A + Sbjct: 230 IQQSPDYVNAYPLLAQAYEH--KHDYTKVLRTAQAGLAYN-ELDETLYSMGARAAANLDE 286 Query: 341 IDQAHAKAMLAMKIAPRKEIFLL 363 + A +K+AP L Sbjct: 287 LSTARELLEKGLKVAPDNSDLRL 309 >gi|53715218|ref|YP_101210.1| hypothetical protein BF3934 [Bacteroides fragilis YCH46] gi|52218083|dbj|BAD50676.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 320 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 84/231 (36%), Gaps = 10/231 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + A + L I + L + G+ A + + + P+ Sbjct: 38 AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQLYIQTGEFGKAHELLERMIALEPELTS 96 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + +++ +K A E A L+ ++ D G M ++ Sbjct: 97 TYLTLANLCFMQEDYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 +++ L D+ A + A++L + +A +E I NP E A + + G Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211 Query: 310 KLKRALR----LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 K + A + EIN + ++ + + ++ + + A A+++ P Sbjct: 212 KEEEAETDYLHVTEINPFNEQAYLYLGQLFITQKKLTAAIELFDEAIELNP 262 >gi|327303364|ref|XP_003236374.1| 20S cyclosome subunit BimA/Nuc2/Cdc27 [Trichophyton rubrum CBS 118892] gi|326461716|gb|EGD87169.1| 20S cyclosome subunit BimA/Nuc2/Cdc27 [Trichophyton rubrum CBS 118892] Length = 802 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 15/201 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + ++ A + Q+ + + E + + AQ A+ +P Sbjct: 589 LQSDHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYS 646 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + Y + + F Q + A N +L+ + L + ++ A+ Sbjct: 647 AWYGLGKVYERMGK----LKFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQY 702 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLS 304 + L +S++A + A++L+ N+ A +L+ + P H + +Y + Sbjct: 703 SRASSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQD 762 Query: 305 ENTVGKLKRALRLEEINKESV 325 + +K ++ ++ Sbjct: 763 KGNA--IKHFTTALNLDPKAA 781 >gi|262378887|ref|ZP_06072044.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|262300172|gb|EEY88084.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 570 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 97/315 (30%), Gaps = 37/315 (11%) Query: 100 IPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 +A H S N L + + ALA A ++ + Sbjct: 24 GSIASTAHLRASGDIYHENPNYNALKQSMIAEFALAYGDIPTALHNYTVLAIKSNSTTIK 83 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + DL +A AT + P + + A E+ A LN+ Sbjct: 84 QRAL-NVALEQNDLKAALDIATHWVVQEPQDVPALFYLAHISLKAHEYELAADTLNKILN 142 Query: 217 NAKEWNRNRAI----------------------------LLIARSLENADKGDMIASYHD 248 + + + +L+ + A G + + Sbjct: 143 IDPNADLEQILAGIAPELPEDREILLNALRSSKEKNNPSILVLIAGLEAQNGQLEQALVT 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSE 305 ++L+ + A L++QN + A+ LEK + + +A + + S Sbjct: 203 INQALRKRPKVTGFILMKANLLMAQNDQLAAQQWLEKSSRKQKYNLDIRLAEVRFLVKSN 262 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLL 363 LK+ + + ++ E+L I ++++ +QA + + + L Sbjct: 263 QAESALKKLQGILKQWPDAEEALFIAGLTSIDLKQYEQAEKYLVELRYSDQYQNEAYYYL 322 Query: 364 LAQIEQANSHNTDKI 378 E+ + T K Sbjct: 323 AVNAERKQHYETAKA 337 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 11/123 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPA--- 151 N A + + + L+Y Q+ L + + + L+ +L+I Sbjct: 396 TGNKKAALALLDEAVKN-LPDDPELIY---AQVLLLDPFQDREKLDQTLKHLLEIEPNSP 451 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 T A Y + + LN A++YA AL+ +P+ + + + +L ++ A+ L Sbjct: 452 TYLNAY--AYTLALQNRRLNEARQYAEHALEYAPEQASILDTLGYVCILQNDYDTAVRVL 509 Query: 212 NQK 214 + Sbjct: 510 AKA 512 >gi|326387903|ref|ZP_08209509.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] gi|326207949|gb|EGD58760.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] Length = 510 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 35/265 (13%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + + A + L P + + + GDL A +AL I PD Sbjct: 50 AEALFFQGDRDGARKVLAEGGFTPDSAGLGLRVKGQVALADGDLGGAGAAFDQALRIVPD 109 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + A+ E +AI + + R L R L ++ + AS Sbjct: 110 DPDLWVAIASLRFTGGEQEQAIEASEKAVVLDPKNPR----ALALRGLLIREQYGLAASL 165 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 +LK + A +L + R A +I+ Sbjct: 166 PWFEAALKNHPDDPPLLDAYASTLGDLGQYR-AMLIV----------------------- 201 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +L E++ ++ ++ + +A G + A + +LL+ Sbjct: 202 -------CRKLAEVDPKNPRPFLLQAVLAARAGQTNLARSILQRTGTTYRDMPAAMLLSG 254 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 + + + N D + + + PD Sbjct: 255 VLEYQAGNYDSSVGVLERLVRIQPD 279 >gi|196229049|ref|ZP_03127915.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196227330|gb|EDY21834.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 725 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 11/225 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Q A +L + + L + + + A + +AL++ + Sbjct: 19 AGQLREAEGIYRQILTVDPNHAEVHHLLGVIAHQCERESEAVNWIRRALELGLVSASAWS 78 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + Y ++ AI ++ ++ A L L G + + + Sbjct: 79 NLGEAYRALGRFAEAIEAYRAALRHNPQFGAAYANL----GLALRQNGQIGEAIEALRQG 134 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENT 307 + L + + A A L Q + +A + + P+ A+ + L E Sbjct: 135 IHLLPDHLDAHRNLAACLAEQGRLDEANAHYRLVLRRR--PDAADSWFDLGVVLTQQEKL 192 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + R EI+ + ++ + ++ G D A A A+ Sbjct: 193 DEAIAAYRRAIEIDPQFAQAHHNLGAALVDRGDWDAAMAALRQAL 237 >gi|331659838|ref|ZP_08360776.1| cellulose synthase operon protein C [Escherichia coli TA206] gi|331053053|gb|EGI25086.1| cellulose synthase operon protein C [Escherichia coli TA206] Length = 1157 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 89/269 (33%), Gaps = 15/269 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ I L+ ++ + + + L ++ ++G Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ +A+ ++ + + P+ PE Y Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536 Query: 301 HLLSENTVGK--LKRALRLEE--INKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351 LS + + L L N E + + V + A + + + Sbjct: 537 LYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQVLETANRLRENGKEAEAEAML 596 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + P I L LA Q + Sbjct: 597 RQQPPSSRIDLTLADWAQ-QRRDYTAARA 624 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 46/352 (13%), Positives = 106/352 (30%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273 + +L + + + E +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ I + QA NT Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGNTAAAQQ 692 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K I + V + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGNTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738 >gi|298244298|ref|ZP_06968104.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM 44963] gi|297551779|gb|EFH85644.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM 44963] Length = 517 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 86/274 (31%), Gaps = 38/274 (13%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A +I A + ++ ++ + Y +A +++ + Sbjct: 232 AEAGDIQKA--LSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIELNPSYF 289 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 +A+Y L IGD A +A+++ P + Y +W AI Q Sbjct: 290 WAIYKLADAYQEIGDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQS 349 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + R + ++ + GD + +++KL A ++ Sbjct: 350 IELNPSYFR----AIYNLAVAYQEIGDFEQALISYNQAIKLEP-------LKADIYNNRG 398 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 H ++ +Y ++ + ++N + Sbjct: 399 NVY--------------H-KLGIVYQAIVDYSQS---------IKLNPSHPITYFNRGGS 434 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 ++G+I+QA A+++ P + AQI Sbjct: 435 HAKLGNIEQAIEDYSRAIELDPSFANAYFSRAQI 468 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 58/166 (34%), Gaps = 10/166 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + +A +++ + A+Y+L IGD A +A+ + P Sbjct: 332 AYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALISYNQAIKLEPLKA 391 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAILLIARSLENADKGDMIAS 245 Y + + Q + + + N + I R +A G++ + Sbjct: 392 -------DIYNNRGNVYHKLGIVYQAIVDYSQSIKLNPSHPITYFNRGGSHAKLGNIEQA 444 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D +++L + A A+ + + ++A +K +K+ P Sbjct: 445 IEDYSRAIELDPSFANAYFSRAQIYDAIGELQQAIGDYDKAFKLKP 490 >gi|197120080|ref|YP_002140507.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089440|gb|ACH40711.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 405 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 22/213 (10%) Query: 77 HKRNYDKGYKALYTGL-------MSIAAHNIPLARKMH-SYVSQQHTFHNEYLVYLLEVQ 128 + AL +GL + A + A M + Sbjct: 22 DSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFL----------AS 71 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A+ + + A + + L + T++ +L + N A+R A ++P Sbjct: 72 AYQAQGKTDEAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAEREFKDAAKLNPTDT 131 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + Q YV + + A T + + A L + E G + Sbjct: 132 LAPYTLGQLYVQTERYGEAETQFKKVSRMAPTDPNPYYSLGAVYNKE----GKYADAVKQ 187 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +++KL A + + A+ Sbjct: 188 LTQAVKLRPKMEAAHFELGVAYAALGDTTNAQK 220 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 55/179 (30%), Gaps = 9/179 (5%) Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A ++ L K D + + ++ + + A A + +Q Sbjct: 18 LASQDSQRAQLANGALSSGLGYYQKKDYARATGELKRAISMDPTNTQAYKFLASAYQAQG 77 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 K +A + ++P H + NIY N + ++N + Sbjct: 78 KTDEAIKTYKNSLALDPTQDSIHTNLGNIYLQQKKYNLAER--EFKDAAKLNPTDTLAPY 135 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALH 387 + ++ ++ +A + ++AP + L + D + A+ Sbjct: 136 TLGQLYVQTERYGEAETQFKKVSRMAPTDPNPYYSLGAVYNKEGKYADAVKQ-LTQAVK 193 >gi|194335763|ref|YP_002017557.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308240|gb|ACF42940.1| TPR repeat-containing protein [Pelodictyon phaeoclathratiforme BU-1] Length = 1094 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 75/254 (29%), Gaps = 42/254 (16%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 +LL Q + A ++Q A+ L + + + AL Sbjct: 31 AFLLHQQ-----GRLEEAEALYREIVQSDPEHFEALRLLAIIAVQKKRFEDSLVLFDHAL 85 Query: 182 DISPDAPWVTEAVVQQYV----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 I+P A + + A+ ++ A + R + Sbjct: 86 KINPRHA----ATLNNQGVVYEELHRFDEALCSYEHALAVKPDY----AEASLNRGVMLQ 137 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-----KRKAEVI--LEKIWKVN 290 + G + +L + A+ + KR E + EK +N Sbjct: 138 ELGRFDEAVLSYDHALTNDAD-------NARIWFHRGNVLQDLKRYGEAVFSFEKALAIN 190 Query: 291 PHPEIANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVSKIALEMGSIDQ 343 P+ A Y +L N + LKR R +N +SV + V E+ ++ Sbjct: 191 --PDYAIAYANL--GNVLQDLKRYEEAVLSYDRAIAVNPDSVRAYVNRGIALQELKRYEE 246 Query: 344 AHAKAMLAMKIAPR 357 A A I P Sbjct: 247 AVFSFEKACAINPD 260 >gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii] gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii] Length = 1116 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 70/204 (34%), Gaps = 13/204 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---PATRE 154 ++ A ++++ + + ++ +L A + A E M+ P Sbjct: 546 GDVSRALQVYNRMLELELVPDKVTFNILIA-GACKAGNFEQASALFEEMVAKNLQPDVMT 604 Query: 155 FA--VYSLYFESCRIGDLNSAQRYATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITFL 211 F + L C+ G + +A+ ++ P A+V + A FL Sbjct: 605 FGALIDGL----CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + + + +L A + D ++S +++ +I L Sbjct: 661 EEMVSSGCVPDSI-TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV-DGLW 718 Query: 272 SQNKKRKAEVILEKIWKVNPHPEI 295 + +A +LE++ HP++ Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDV 742 >gi|242278768|ref|YP_002990897.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638] gi|242121662|gb|ACS79358.1| TPR repeat-containing protein [Desulfovibrio salexigens DSM 2638] Length = 206 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 10/161 (6%) Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-- 185 L++R + A + + + P E V L + + GDL RY A P Sbjct: 34 AYLSKRDFMEAEREFLVAIDESPKMAEAYVQ-LGGIAMQRGDLEGCLRYNITATQQRPFF 92 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 PW V Y+ E +AI L + K + + + L A ++G++ Sbjct: 93 AVPWGNIGYV--YMEQGETDKAIKALKRAIKYDPNFVQALSTLGAAY----FNEGELDDC 146 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++LKL DN A A + +KA ++K Sbjct: 147 IEVCEKALKLADNFGPAWNNLALCYTEKEDYKKAIECVDKA 187 >gi|196228531|ref|ZP_03127398.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196227934|gb|EDY22437.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 630 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 79/277 (28%), Gaps = 47/277 (16%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A +L A++ L + ++G A KA+ ++P+ Sbjct: 19 AGRLAEAEGLYRQILGAQPNHAGALHLLGVIADQVGRHEVAVELIQKAIALAPNVADFHS 78 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A+ + + + A + +L +G + + + Sbjct: 79 NLGAAQRNLGRFDEAMAEFRRAIQLQPD--HADAHNNLGSAL--IAQGVLGEAVTVLRRT 134 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------------------- 291 ++L A +L + + +A + ++ P Sbjct: 135 IELRPTLAEAHNNLGIALGGEGRGEEAVAACRRAVELQPGYANGYNSLGVALVNQRELAE 194 Query: 292 -----------HPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +P+ Y + + + R EI E+ + Sbjct: 195 AIAAFRRAIAVYPDYVEAYCNLGNALVDEGSLDEAVATCRRAIEIRPNHAEAHNNLGVAL 254 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKE------IFLLLAQ 366 + G++ +A A+++ P + L+A+ Sbjct: 255 IAQGALQEAGDAFRRALELQPNQAESHSNLSVTLMAE 291 >gi|116623755|ref|YP_825911.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226917|gb|ABJ85626.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 770 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 87/312 (27%), Gaps = 14/312 (4%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEM 145 A L + + E L +L Q A++ + Sbjct: 454 ARSRALSGLGRGAEARQELSRLAADRPRLLDAEVELAFLDLAQG-QAKKAETALRRFYQP 512 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 L T E L G A L + D P V A+ V A+ W Sbjct: 513 GLPSSRTAE----GLARAIAAQGQPGKALELLQTELKQTHDRPSVLSALGDMAVAARNWD 568 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 AI + ++ + + A L + KGD+ + + L + Sbjct: 569 VAI----KAYEDLAQSRGSSAALEGRIAEVYEAKGDIDTALVRVRSARGLEPKNANLIAY 624 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYT---HLLSENTVGKLKRALRLEEIN 321 L ++ +A + + +P+ ++AN + N L+ A Sbjct: 625 TGYLLEKSGRREEAIKEYRECLRTDPNRTDVANNLAFQLAEMGGNGAEALRLAEDCVRRQ 684 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + + + + G ++A + + P + ++ + Sbjct: 685 PRNTAYQDTLGWVYYKSGDFNRAASLLQQVVTADPGLAGSRYRLALAFVAKNDKTRARDE 744 Query: 382 TQSALHAMPDPL 393 Q AL A P Sbjct: 745 LQRALAANATPT 756 Score = 38.4 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 65/227 (28%), Gaps = 17/227 (7%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++ + Y A + + + + A + K + Sbjct: 292 TDAERHYREGAAKAPKQSADYEKKLATVLASQGKRDDAFAIAERLVKQNP----KDLSAI 347 Query: 230 IARSLENADKGDMIASYHDAIESLKLC---DNSIMASICAAKSLISQNKKRKAEVILEKI 286 R+ + GD I L + + ++ I + A+ LE+ Sbjct: 348 KLRAFLFLESGDKIKVRKALEVYQGLAVQQPGNAEIYLEEGRAYIGLEDLKSAKAALEQA 407 Query: 287 WKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K+ P + Y +L ++ L A + + + S+ +G + Sbjct: 408 RKLAPGSPLILGYLVNVYLQMDSFTNALAAADEILISAPADPGAHIARSRALSGLGRGAE 467 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + PR LL A++E D + A A+ Sbjct: 468 ARQELSRLAADRPR----LLDAEVE---LAFLDLAQGQAKKAETALR 507 >gi|74211402|dbj|BAE26451.1| unnamed protein product [Mus musculus] Length = 941 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 104/301 (34%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A + A Sbjct: 637 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQE 696 Query: 229 LIARSL--------------ENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + ++G+ M + + LK C +S + ++ Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 814 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 815 SE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 872 Query: 391 D 391 D Sbjct: 873 D 873 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 83/227 (36%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKRRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 >gi|189499558|ref|YP_001959028.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] gi|189494999|gb|ACE03547.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] Length = 571 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 86/237 (36%), Gaps = 11/237 (4%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + ++ + A +AL+I + E Y+ +++ + ++ ++Q +K Sbjct: 325 LRGMFLRVQKRYRDAGADFL--RALEIDSHNIFAWEEYASAYMSQEDYEQVVSTVSQARK 382 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES-LKLCDN--SIMASICAAKSLISQ 273 + + + + + A+ S ++ + + A I A + Sbjct: 383 RTGRSSLRLDVFEGYALFRSENLRKSVDVLEKALSSEIEDKPSWLLVQAHITLAMAYDRL 442 Query: 274 NKKRKAEVILEKIWKVNPHPEIAN---IYTHL-LSENTVGKLKRALRLEEINKESVESLV 329 + K+ + + ++P +A Y + EN ++ A E + ++ L Sbjct: 443 QDQLKSISAYKDVLSLDPENALALNNLAYLYAERGENLNEAIEYAKTAVESDPDNPVYLD 502 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSA 385 + + + G +A A+ P + EI+ LA+I +A + + + A Sbjct: 503 TLGWLYYKTGEYGKAREYLEKALAKDPDEPEIYDHLAEIYRALGK-ETRAKEFREKA 558 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 4/127 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISP 185 + + + +L + A+ +L Y + R +LN A YA A++ P Sbjct: 436 AMAYDRLQDQLKSISAYKDVLSLDPENALALNNLAYLYAERGENLNEAIEYAKTAVESDP 495 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIA 244 D P + + Y E+ +A +L + K+ E + I R+L + Sbjct: 496 DNPVYLDTLGWLYYKTGEYGKAREYLEKALAKDPDEPEIYDHLAEIYRALGK--ETRAKE 553 Query: 245 SYHDAIE 251 A E Sbjct: 554 FREKADE 560 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 20/138 (14%) Query: 269 SLISQNKKRKAEVILEKI----------WK-VNPHPEIANIYTHLLSENTVGKLKRALRL 317 +L RK+ +LEK W V H +A Y L +LK Sbjct: 398 ALFRSENLRKSVDVLEKALSSEIEDKPSWLLVQAHITLAMAYDRL-----QDQLKSISAY 452 Query: 318 EEINKESVESLVIVSKIALEMGSIDQ----AHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 +++ E+ + ++ +A + A A A++ P ++L + Sbjct: 453 KDVLSLDPENALALNNLAYLYAERGENLNEAIEYAKTAVESDPDNPVYLDTLGWLYYKTG 512 Query: 374 NTDKILYWTQSALHAMPD 391 K + + AL PD Sbjct: 513 EYGKAREYLEKALAKDPD 530 >gi|294494031|gb|ADE92787.1| cellulose synthase operon protein C [Escherichia coli IHE3034] Length = 1140 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 335 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 392 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 393 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 452 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 453 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 512 Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273 + +L + + + E +L ++ + + A L Sbjct: 513 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 569 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 570 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 623 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ I + QA +T Sbjct: 624 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 675 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 567 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 626 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K I + V + + A N+ + + Sbjct: 627 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 686 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 687 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 721 >gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 1337 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 21/199 (10%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---R 225 D A KA++ PD E+ +AI+ +Q K +++ R Sbjct: 158 DWRGAIFSLEKAIEFKPDYHEAWLVRGSALGNLGEYEKAISSCDQAIKFKPDYHEAWANR 217 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + L G+ + +++K + A + +L + + KA ++ Sbjct: 218 GVALSYL-------GEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQ 270 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE-------INKESVESLVIVSKIALEM 338 K P++ + + N + L + + E+ ++ + Sbjct: 271 AIKFK--PDLHEAWNN--RGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYL 326 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G ++A + A+K P Sbjct: 327 GEYEKAISSYDQAIKFKPD 345 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 63/195 (32%), Gaps = 11/195 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ A +A+ PD E+ +AI+ +Q K +++ A Sbjct: 259 GEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPDYH--EAW 316 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ +L G+ + +++K + A +L + + KA ++ Sbjct: 317 LVRGVALSYL--GEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAI 374 Query: 288 KVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K P+ + + + + + E+ ++G + Sbjct: 375 KFK--PDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYE 432 Query: 343 QAHAKAMLAMKIAPR 357 +A + A+K P Sbjct: 433 KAISSYDQAIKFKPD 447 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 63/197 (31%), Gaps = 15/197 (7%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ A +A+ PD E+ +AI+ +Q K + + A Sbjct: 225 GEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFKPDLH--EAW 282 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +L N G+ + +++K + A + +L + KA ++ Sbjct: 283 NNRGNALANL--GEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISSYDQAI 340 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEE-------INKESVESLVIVSKIALEMGS 340 K P++ + + N + L + + E+ +G Sbjct: 341 KFK--PDLHEAWNN--RGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGE 396 Query: 341 IDQAHAKAMLAMKIAPR 357 ++A + A+K P Sbjct: 397 YEKAISSYDQAIKFKPD 413 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 15/169 (8%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q+ ++ ++W AI L + + +++ A L+ +L N G+ + +++K Sbjct: 151 QRLLVNRDWRGAIFSLEKAIEFKPDYH--EAWLVRGSALGNL--GEYEKAISSCDQAIKF 206 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A +L + KA ++ K P++ + L+ + +G L Sbjct: 207 KPDYHEAWANRGVALSYLGEYEKAISSCDQAIKFK--PDLHEAW--LVRGSALGNLGEYE 262 Query: 316 RLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + E+ +G ++A + A+K P Sbjct: 263 KAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPD 311 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 68/227 (29%), Gaps = 41/227 (18%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RN 224 G+ A +A+ PD E+ +AI+ +Q K +++ N Sbjct: 327 GEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYN 386 Query: 225 RAILL---------------------------IARSLENADKGDMIASYHDAIESLKLCD 257 R + L R L D G+ + +++K Sbjct: 387 RGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKP 446 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 + A +L + KA ++ K+ P++ +++ + + L + Sbjct: 447 DYHEAWFVRGVALSYLGEHEKAISSYDQAIKIK--PDLHEAWSN--RGSALSHLGEYEKA 502 Query: 318 EE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E+ +G ++A + A+K P Sbjct: 503 ISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPD 549 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 14/163 (8%) Query: 134 RQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 +Y A + + P E L G+ A +A+ PD Sbjct: 497 GEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYL--GEYEKAISSYDQAIKFKPDYHEAW 554 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLIARSLENADKGDMIASYHD 248 E+ +AI+ +Q K + + NR + L G+ + Sbjct: 555 SNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYL-------GEYEKAISS 607 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++K + A +L + KA ++ K P Sbjct: 608 YDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKP 650 >gi|260220727|emb|CBA28578.1| hypothetical protein Csp_A07860 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 425 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 52/408 (12%), Positives = 113/408 (27%), Gaps = 40/408 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + S + + V++ W S ++L L L Sbjct: 1 MRFALWLMALFGMAVASALFAGNNQGTVTLYWPPYRVDVSLNLVLLGLALAFVTLHLALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMH--------SYVSQ 112 S P Y L + + A ARK + +S Sbjct: 61 GISGLFSIPQQARRWRLSYKERTIYSGLLDTISHLVAGRFVRARKAAEVVVAVEDAMLSS 120 Query: 113 QHTFHNEY----LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-------FAVYSLY 161 + L +LL + A A + + L+ +++ + + Sbjct: 121 GDALPDAARLRTLAHLLAAESAHALQDRGTRETHFQRALEEAGSKDASDLRDGVQLRA-A 179 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + D A ++ + + + A+ A+ K+ Sbjct: 180 RWALEDRDSTGAVQWLEQLPVGTARRTIALRLRFKAARQARNTRVALDSARVLTKHRAFS 239 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM--ASICAAKSLISQNKKRKA 279 A ++ +LE A A +L + + A A + L+ Q A Sbjct: 240 EVAGAGIVRGLALELLRGAHDAAQLEQAWGALDDVERLLPDVALEAAERLLLLQGDVATA 299 Query: 280 EVILEKIWKVNPHPEIANIY-----------THLLSENTVGK---LKRALRLEEINKESV 325 + + +W+ A Y +SE T L R + Sbjct: 300 RLWVLPLWQGQNPQASALSYEQRVRLVRLLERSFMSEETQPDGVWLSRIEAAQMAQPGDP 359 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAM----KIAPRKEIFLLLAQIEQ 369 + + + + +A A A+ ++ +L +A++ + Sbjct: 360 LLQYLAGVLCVRLSLWGKAQALLRQAIPMLKDADMKRRAWLAMAELAE 407 >gi|182413817|ref|YP_001818883.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177841031|gb|ACB75283.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 776 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 9/162 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A + + + + L LL + + A L+ A Sbjct: 609 DAITAHRNALRLRADYPEAHTELGLLLLSR-----GEPAEAETHFRAALRSAPELATAHL 663 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G + A T+A++++PD+P V Q + ++++ A+ + A Sbjct: 664 GLARAAEQLGRADEATASFTRAVELAPDSPLVQRTAAQAFARRQQFAAAVE----HYQRA 719 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 E A L G +L L Sbjct: 720 IELQPQDAALRAELGYALILSGRRADGIAAWKAALALDPTLP 761 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 39/357 (10%), Positives = 87/357 (24%), Gaps = 54/357 (15%) Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMS---IAAHN 99 L + + P LF + L++ Sbjct: 415 TAAVTAVAVLLGGAIRTWEQQAVWRDPTTLFRHALAVTER---NEVGHALLAYTLATQSE 471 Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATR-- 153 + A + + + L L + + A E +L+ T Sbjct: 472 LEEAAIHSRRALELNPRNRTALFTL--ASVLERQGHAGDAAELYRRVLELNPKDSDTEYR 529 Query: 154 ------------------EFAVYS--LYFESCRIGDLNSAQRYA-------TKALDISPD 186 L + G ++ A AL ++PD Sbjct: 530 LGLLLLRQRDPGAQQHLHAVGQRHPELVQQRIAEGMDHTLHGRAHLGLAQFEVALALNPD 589 Query: 187 APWVT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P A + L ++ AIT + ++ L +G+ + Sbjct: 590 EPAAHFGAGLALAQLDRD-DDAITAHRNALRLRADYPE----AHTELGLLLLSRGEPAEA 644 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYT 300 +L+ A + A++ + +A + ++ P + A + Sbjct: 645 ETHFRAALRSAPELATAHLGLARAAEQLGRADEATASFTRAVELAPDSPLVQRTAAQAFA 704 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ R E+ + + + G A A+ + P Sbjct: 705 --RRQQFAAAVEHYQRAIELQPQDAALRAELGYALILSGRRADGIAAWKAALALDPT 759 >gi|124267434|ref|YP_001021438.1| tetratricopeptide repeat-containing protein [Methylibium petroleiphilum PM1] gi|124260209|gb|ABM95203.1| putative membrane protein [Methylibium petroleiphilum PM1] Length = 389 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/256 (11%), Positives = 78/256 (30%), Gaps = 20/256 (7%) Query: 177 ATKALDISPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232 A A + T+A + +++W AI + + + A Sbjct: 132 AEAAFRALEGTAFATDARLDLLTLHERSRDWHAAIETARKLEAAGAGSFANRMAHYGCEI 191 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +LE + + ++ + + + A + L + R+A +++ P Sbjct: 192 ALEADARRRPDEAEEALRKAREAAPQAPRPRVIAGQRLARAGQHREALSAWDELLATQPS 251 Query: 293 --PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH-AK 347 IA+ Y + L + R + + + + ++ A + Sbjct: 252 AFALIASDYANSALACGDAADARGRLEAVYDRVPS-----LDIVTALQQLEPDPAARHER 306 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANS-----HNTDKILYWTQSALHAMPDPLWISDDGYLS 402 ++ P L + +QA + +++ T +A + + G+ + Sbjct: 307 LRRHLQAHPTLSAASALLKEQQAQGLAPTSTDAEQLQQITAAAARPIRRFR-CAACGFEA 365 Query: 403 SVWLPLSPISKTLCYF 418 + P + + Sbjct: 366 QHYFWQCPGCHSWDSY 381 >gi|194016938|ref|ZP_03055551.1| TPR repeat-containing protein YpiA [Bacillus pumilus ATCC 7061] gi|194011544|gb|EDW21113.1| TPR repeat-containing protein YpiA [Bacillus pumilus ATCC 7061] Length = 432 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 74/197 (37%), Gaps = 8/197 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G ++ A A + S + + L L + E Y+ A E ++ ++I Sbjct: 220 GFTAMRAGRTKTAIQQLSEL-KDIDPSYSSLYMPL-AKSYEEEGLYHEALEVVKEGIKID 277 Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 +E +Y + GD A++ +AL + P + ++ Y+ + + + Sbjct: 278 EYNKELYLYG-AKIDLKNGDSEDAKKLLQEALALDPGYIEAVQTLLAIYLNEELFDEILD 336 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + K ++ + A S+ + + + A+ + + A Sbjct: 337 VIKEVKSFGEDDPKWNWYAASA-SVGREEYKEAAEYFKLALPDFDEERDFL---YEYASF 392 Query: 270 LISQNKKRKAEVILEKI 286 L+ + ++++A +L K+ Sbjct: 393 LLEEGRQKEALPLLRKV 409 >gi|293393855|ref|ZP_06638162.1| cellulose synthase subunit BcsC [Serratia odorifera DSM 4582] gi|291423682|gb|EFE96904.1| cellulose synthase subunit BcsC [Serratia odorifera DSM 4582] Length = 1157 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 99/319 (31%), Gaps = 59/319 (18%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N+ LA++ + Q + L+ L +A+A A + Sbjct: 355 WLAIDEGDKALKANNLSLAQQKYQQARQIDNADADALIGL--GDVAVARHDDAAAERYYQ 412 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRY------------------------ATKA 180 L++ AV L R A Y +A Sbjct: 413 QALRLDRGSGSAVRGLTNIYQRQS-PQKALAYLNGLPPAQRNKMRDTLDGLQLDMLKQQA 471 Query: 181 LDISPDAPWVTEAVVQQYVLAKE----W-----------------SRAI-TFLNQKKKNA 218 ++ W A + + ++ W + A+ L QK+++ Sbjct: 472 EALAQRQQWHQAAEIYRQARLRDPDDVWLTYRYAQVLRQAGQPQQADALFNALVQKQRHD 531 Query: 219 KEWNRNRAILLIARSLENADKGDMIAS-YHDAIESLK-LCDNSIMASICA-AKSLISQNK 275 + A+ L + ++ + ++++ L + + A A+ L + Sbjct: 532 PQQVYAYALYLSSSDRDSQALAHLATLPRAQWNDNMRELAQRLQLQATLAQAERLRAGGD 591 Query: 276 KRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A L + P ++ L + G L R+ + ++ + Sbjct: 592 SAAAVTYL----QRQPADTRIDLTLADWALADGDYAGALADYQRVRGREPNNPDARLGEI 647 Query: 333 KIALEMGSIDQAHAKAMLA 351 + + G++ A + A Sbjct: 648 EAYVAQGNMSAARQRLQTA 666 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 96/273 (35%), Gaps = 24/273 (8%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL ++A +K + QI A+ L + D +A+RY +AL + + Sbjct: 364 ALKANNLSLAQQKYQQARQIDNADADALIGLGDVAVARHDDAAAERYYQQALRLDRGSGS 423 Query: 190 VTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + Y +A+ +LN Q+ K + + +L ++ A + Sbjct: 424 AVRGLTNIYQRQSP-QKALAYLNGLPPAQRNKMRDTLDGLQLDMLKQQAEALAQRQQWHQ 482 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + ++ + + + A+ L + ++A+ + + + H + +Y + L Sbjct: 483 AAEIYRQARLRDPDDVWLTYRYAQVLRQAGQPQQADALFNALVQKQRH-DPQQVYAYALY 541 Query: 305 ENTVGK----LKRALRL--EEINKESVE-SLVIVSKIALEMGSIDQA---HAKAMLAMKI 354 ++ + L L + N E + + + L +A A A+ ++ Sbjct: 542 LSSSDRDSQALAHLATLPRAQWNDNMRELAQRLQLQATLAQAERLRAGGDSAAAVTYLQR 601 Query: 355 AP-RKEIFLLLAQIEQANS------HNTDKILY 380 P I L LA A+ + ++ Sbjct: 602 QPADTRIDLTLADWALADGDYAGALADYQRVRG 634 >gi|156543124|ref|XP_001605583.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Nasonia vitripennis] Length = 1215 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 79/251 (31%), Gaps = 23/251 (9%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYAT-------KALDISPD 186 A + LQ+ A+ L D + + + Sbjct: 213 NREKARCAYKRALQLDEKSVGALVGLAILKLNEFNDTQDQNSEYENSIKDGIQMFATAYN 272 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENADKGDMI 243 V+ + + + +A E RA + +GD Sbjct: 273 IDQTNPMVLNHLANHYFFKKDYKTTQRLALHAFHNTENESMRAESCYQLARSFQVQGDYD 332 Query: 244 ASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIAN 297 ++ ++ + ++ + I + A EK+ K P+ + + Sbjct: 333 QAFQYYYQATQFASPVFVLPHYGLGQMYIYRGDNENAAQCFEKVLKAQPNNYETMKILGS 392 Query: 298 IYTHLLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +Y + ++++ K ++ E + + VE+ + +++I LE + ++ A + A Sbjct: 393 LYANSVTQSKRDMAKTFLQKVTEDHPDDVEAWIELAQI-LEQSDL----QASLKAYETAT 447 Query: 357 RKEIFLLLAQI 367 R + A+I Sbjct: 448 RILNEKIQAEI 458 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 96/259 (37%), Gaps = 31/259 (11%) Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 ++ A+ ++ A + + ++ + P + + L + G + A + AL I Sbjct: 513 ARVYEAQCMFDKAEKLYKNVLKEHPNYIDCYLR-LGCMARDKGQIYEASDWFKDALRIDN 571 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADK 239 + P + ++ +EW + +N N +++ + DK Sbjct: 572 EHPDAWSLLGNLHLAKQEWGPGQKKFERILRNPSTNNDAYSLIALGNIWLQTMHQSGKDK 631 Query: 240 GDMIASYHDAIESLKL----CDNSIMAS-----ICAAKSLISQNK-----KRKAEVILEK 285 A+ + KL +I A+ + A K +++ + R+A L Sbjct: 632 DKEKRHQDRAMANYKLVLRNDPKNIWATNGVGCLLAHKGYMNEARDIFAQVREATSELPD 691 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +W IA++Y + ++ + + + VE L +++ L+ G + + Sbjct: 692 VWLN-----IAHVYVEQKQYVSAIQMYENCLRKFYKYH--HVEILGYLARAYLKAGKLKE 744 Query: 344 AHAKAMLAMKIAPRKEIFL 362 A + A ++AP+ + L Sbjct: 745 AKLTLLTARRVAPQDPVLL 763 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 29/262 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + + Y+ A + Q + Y L GD +A + K L P Sbjct: 322 ARSFQVQGDYDQAFQYYYQATQFASPVFVLPHYGLGQMYIYRGDNENAAQCFEKVLKAQP 381 Query: 186 DAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + + + Y + A TFL + ++ + A + +A+ LE +D Sbjct: 382 NNYETMKILGSLYANSVTQSKRDMAKTFLQKVTEDHPD--DVEAWIELAQILEQSDLQAS 439 Query: 243 IASYHDAIESL--KLCDNSIM-----ASICAAKSLISQNKKRKAEVILE--KIWKVNPHP 293 + +Y A L K+ + + + K LE K HP Sbjct: 440 LKAYETATRILNEKIQAEIPPEILNNIAAIQYRLECLDEARNKLTESLERSKA-DAEHHP 498 Query: 294 ------EIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQ 343 + Y +A +L + + ++ + + +A + G I + Sbjct: 499 SYYNSIAVTTTYNLARVYEAQCMFDKAEKLYKNVLKEHPNYIDCYLRLGCMARDKGQIYE 558 Query: 344 AHAKAMLAMK---IAPRKEIFL 362 A A++ P L Sbjct: 559 ASDWFKDALRIDNEHPDAWSLL 580 >gi|306816118|ref|ZP_07450256.1| cellulose synthase subunit BcsC [Escherichia coli NC101] gi|305850514|gb|EFM50971.1| cellulose synthase subunit BcsC [Escherichia coli NC101] Length = 1157 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273 + +L + + + E +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ I + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K I + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738 Score = 36.8 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-------PEIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHNSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|157692758|ref|YP_001487220.1| hypothetical protein BPUM_1990 [Bacillus pumilus SAFR-032] gi|157681516|gb|ABV62660.1| hypothetical protein BPUM_1990 [Bacillus pumilus SAFR-032] Length = 432 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 8/197 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G ++ A A + S + + L L + E Y+ A E ++ ++I Sbjct: 220 GFTAMRAGRTKTAIQQLSEL-KDIDPSYSSLYMPL-AKSYEEEGLYHEALEVVKEGIKID 277 Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 +E +Y + GD A++ +AL + P + ++ Y+ + + + Sbjct: 278 EYNKELYLYG-AKIDLKNGDSEDAKKLLQEALALDPGYIEAIQTLLAIYLNEELFDEILD 336 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + K +E + A S+ + + + A+ + + A Sbjct: 337 VIKEVKSFGEEDPKWNWYAASA-SVGREEYKEAAEYFKLALPDFDEERDFL---YEYATF 392 Query: 270 LISQNKKRKAEVILEKI 286 L+ + ++++A +L K+ Sbjct: 393 LLEEGRQKEALPLLRKV 409 >gi|308811592|ref|XP_003083104.1| putative pre-mRNA splicing factor (ISS) [Ostreococcus tauri] gi|116054982|emb|CAL57059.1| putative pre-mRNA splicing factor (ISS) [Ostreococcus tauri] Length = 1642 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 91/230 (39%), Gaps = 26/230 (11%) Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + I D+ A+ ++ +P W+ A +++ + +A TF +K E Sbjct: 977 AAEISDIKKARLLLKSVINTNPKHAPGWIAAARLEELA--GKLQQARTF---AQKGCDEC 1031 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +N + L A L + I + ++ NS+ I AA+ + +KR Sbjct: 1032 PKNEDVWLEAARLNTPENAKAILAR-----GVQSLPNSVTIWIAAAQLEVEDERKR---R 1083 Query: 282 ILEKIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +L + + P+ + L ++ L RA E + VE + ++++ Sbjct: 1084 VLRRALENVPNSVRLWKALVDLSAEDDARVLLARA---TECCPQHVELWLALARLETA-- 1138 Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388 + A A + PR+ +I++ A++E+A + N + A+ + Sbjct: 1139 --ENARKVLNKARETLPREPQIWITAAKLEEA-NGNGKMVEKIIARAVKS 1185 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 93/290 (32%), Gaps = 63/290 (21%) Query: 160 LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L R GD+ A+ A D +PD+ + A + E +RA L + ++ Sbjct: 1307 LMNAKERWLSGDVPRAREILQAAFDANPDSEEIWLAAFKLEFENGESARARILLAKARER 1366 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS------------------ 259 + R + + +L + GD A E +++ Sbjct: 1367 LTDSER----VWMKSALVEHEAGDAKAERALLNEGIEMFPTFWKLWIMLGQLEEREGRAE 1422 Query: 260 ------------IMASICAAKSLIS-----QNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 ++I SL Q KA +ILE NP E + Sbjct: 1423 EAEQAYEKGTKKCPSAIALWISLSEFELRVQGNASKARIILETARTKNPANE-RLWLAAV 1481 Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---APRK 358 E G ++ A L +E S +++++ ++ M Q +K++ A+K P Sbjct: 1482 RQERESGNVQIAESYLARAIQECPTSGLLLAE-SVRMAPRPQRKSKSVDALKRCDNDPYV 1540 Query: 359 EIFLLLAQIEQANSHNT--DKILYWTQSALHAMPDPLWISDDGYLSSVWL 406 +A + + DK W A+ PD + W Sbjct: 1541 -----IAAVAILFWSDRKLDKARSWWNRAVTIAPD---------IGDHWA 1576 Score = 36.8 bits (84), Expect = 9.1, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 89/289 (30%), Gaps = 50/289 (17%) Query: 129 IALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A E + +P + V L+ + + A+ +A + P Sbjct: 1071 AAQLEVEDERKRRVLRRALENVPNS----VR-LWKALVDLSAEDDARVLLARATECCPQH 1125 Query: 188 PWVTEAVVQQYVLAKE---WSRAITFL--------NQKKKNAKEWNRNRAILLIARSLEN 236 + A+ + ++A L K N +IAR++++ Sbjct: 1126 VELWLALARLETAENARKVLNKARETLPREPQIWITAAKLEEANGNGKMVEKIIARAVKS 1185 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI---------SQNKKRKAEVILEKIW 287 + I ++ +NS S+ ++++ ++KKR W Sbjct: 1186 LKSHGVTIHRESWIREAEVAENSDPPSVATCRAIVKATIGEGVEEEDKKR--------TW 1237 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-----VIVSKIALEMGSID 342 K A+ + E+ A + +S S + + + G+ D Sbjct: 1238 K-------ADAEECMKRESAET----ARAIYAHALDSGFSHKKGLWMKAAMLEKRFGTPD 1286 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A+ P EI L+ E+ S + + Q+A A PD Sbjct: 1287 SVDEVLRKAVTFCPNAEILWLMNAKERWLSGDVPRAREILQAAFDANPD 1335 >gi|147921574|ref|YP_684609.1| hypothetical protein LRC308 [uncultured methanogenic archaeon RC-I] gi|56295578|emb|CAH04820.1| hypothetical protein orf20 [uncultured archaeon] gi|110620005|emb|CAJ35283.1| hypothetical protein LRC308 [uncultured methanogenic archaeon RC-I] Length = 423 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 11/188 (5%) Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 +A+ ++PD + + AI L + + A Sbjct: 50 SLCREAVRLNPDYAEAYCLLGAALAGMGQSGDAIQALEKAITLQPGY----AEAHYYLGK 105 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 G+ + + S +L N MA +L + R++ V L + V+ P Sbjct: 106 AVLATGNPDQALNLFTASKQLGMNESMACCGIGSALAEKGLYRESIVELSRAIAVD--PG 163 Query: 295 IANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 Y L + + + + E+N ++E+ + +++ L D A A+ Sbjct: 164 NVEAYVRLGMACCETGSYAEAMAWLKKAVELNPGNIEAHLCLARAYLRGQMYDAALAEYD 223 Query: 350 LAMKIAPR 357 + + + PR Sbjct: 224 VVLGLRPR 231 >gi|239908595|ref|YP_002955337.1| hypothetical protein DMR_39600 [Desulfovibrio magneticus RS-1] gi|239798462|dbj|BAH77451.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 209 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 6/168 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 +A+ + A + ++ + L + GDL++ + KA P Sbjct: 35 AYVAKGRLIEAEAEFHQAVECSPSLAEGYVQLGGLAMNKGDLDACLEWNEKACRARPLFA 94 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ E +A L + K +++ + A L A ++ G + A+ + Sbjct: 95 VPYGNIGFVHLQRGEIDKAEKALRRAIKIDEKYVQALATLGSALFMQ----GKLEAAENF 150 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV--NPHPE 294 + ++L + A A + + KA+ ++ + PHP+ Sbjct: 151 SQKALAIEPQFGPAINNLALVAMERGDFAKAQELVTQARATGYEPHPD 198 >gi|162448522|ref|YP_001610889.1| hypothetical protein sce0252 [Sorangium cellulosum 'So ce 56'] gi|161159104|emb|CAN90409.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 3746 Score = 48.8 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 44/337 (13%), Positives = 104/337 (30%), Gaps = 60/337 (17%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ----------YNIA---HEKLE 144 + R+ ++++ E + +L IA E A E Sbjct: 3179 GSAGELRREAKELAERALGDRELVEAILREMIAADEGDTWALAELTKVREEAGDHKEVFR 3238 Query: 145 MMLQIPATREFAVYSLYFESCRI---------------GDLNSAQRYATKALDISPDAPW 189 ++++ LY E+ RI GD +A + P Sbjct: 3239 LLVRQSE--------LYAEAERIRDARHAAAAVARERLGDDAAAIELYETLFEADPGDAR 3290 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+ + Y A + + L + A+ A+ L + + + + + Sbjct: 3291 AATALRELYAKAGKHKELLALLERLTDLAESPEARSALRLESAEICLSRLDAVSEATEHL 3350 Query: 250 IESLKLCDNSIMASICAAKSLISQNK---------------KRKAEVILEKIWKVNPHPE 294 L ++ A++ A+ L + K + +V E + V Sbjct: 3351 RAVLDEQPDNEKATVLLAQLLEKTGRDQELSDLFVTQIERAKDRGDVAAELSYSVR---- 3406 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y +T ++ + E +L+ ++++ + G +A + + ++ Sbjct: 3407 LGEVY-EARLNDTARAIETYRAVLEREPRHHGALLALARLHEQRGEKAEAAQRLEVILED 3465 Query: 355 APRK---EIFLLLAQIEQANSHNTDKILYWTQSALHA 388 A L LA + ++ + + + L A Sbjct: 3466 ARAAEAVGTALRLADLHRS-LGDEGAVRRVLERGLAA 3501 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 12/234 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A E +L+ A+ +L + G+ A + L+ + A V A Sbjct: 3416 NDTARAIETYRAVLEREPRHHGALLALARLHEQRGEKAEAAQRLEVILEDARAAEAVGTA 3475 Query: 194 V--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + + L + R LL + A DA Sbjct: 3476 LRLADLHRSLGDEGAVRRVLERGLAADGSAQEIRKQLLALYEKQQAFTELADLITGDAEA 3535 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310 + + + + A L +N +A +L K ++ P E+ S + G+ Sbjct: 3536 AAQPAEKVALYRKAAGIHLAKRNDPGRAADLLVKATELVPGDRELLLALCDAYSASGRGQ 3595 Query: 311 LKRALRLEEI--------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 K A L++I +K+ ++K L G ++A A+ +A KI P Sbjct: 3596 -KAAEALQQIVESYGGRRSKDLAAIHHRLAKAYLAEGQRERALAELDIAFKIDP 3648 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 63/203 (31%), Gaps = 13/203 (6%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 R+ D A + LD+SP + + Y A +W R + + ++ Sbjct: 237 KARLSDPARAVAAYEELLDLSPGQAEALSFLTEAYSAAGDWDRLVALYEDQLRSGGVKPG 296 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS----QNKKRKA 279 +L+ ++ + + + ++ D A + K + Sbjct: 297 EELGMLVQIAMVHWRMRGQPQAAEPYFDRVRRAD---PAHAGMLNFYREVLEQRGDKPRL 353 Query: 280 EVILEKIWKVNP----HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333 IL + P IA L EN +++ + + E+ ++ + + Sbjct: 354 TTILTDAQRAVPDGPEKRAIATELARLAESQENAAKAIEQYKSVLRTDPENRQARDALKR 413 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 + L+ + ++ P Sbjct: 414 LYLQTEGYNALVELHRQDLERTP 436 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 69/227 (30%), Gaps = 8/227 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 ++GD A+ Y + L + P+ E + Q A+ W ++ K + + Sbjct: 1211 EQLGDPEGAKPYLERVLSLDPNNHRAFERLKQILTAAERWGELEELYDRAAKGTTDQSER 1270 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L + GD + L+L A K + + R +LE Sbjct: 1271 IELLNEVALIAEEIIGDAAKAIGYYERILELDPFYTAALDSLEKLYEREGRFRDLAALLE 1330 Query: 285 KIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + K E + +IY G L + I + ++ +V ++ Sbjct: 1331 QRLKTATEAESVEIKLSLGSIYLD-RLHEPEGSLGHLEDVLRIRQNDPKARELVERLLDI 1389 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 +A + + + +I + + + + Sbjct: 1390 GALRLRAARVLEAVYEARDEIRQLVRVLEIRRQGAETESERRELLRR 1436 Score = 38.0 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 8/171 (4%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD+ A R+ +A + PD+ + +A+ V + I K+ +R A Sbjct: 2207 GDVADALRWYRRAHEFEPDSRELFDAIDGLLVKEGRHAERIQLYRAALDYRKDEDRLDA- 2265 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKI 286 L LE + + + +L + +N A + ++ R A++ L + Sbjct: 2266 LHTIARLERTELREPALAIETYRAALDVDENDARALDALTELYRELDRPRDLADLYLRRA 2325 Query: 287 ------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 + P+ E+T G + + + E++ + Sbjct: 2326 EAAPNGERAAPYRLALAALLRTRLEDTSGAIDQLEAIVGEVPSHAEAIRAL 2376 >gi|325915998|ref|ZP_08178291.1| putative N-acetylglucosaminyl transferase [Xanthomonas vesicatoria ATCC 35937] gi|325537808|gb|EGD09511.1| putative N-acetylglucosaminyl transferase [Xanthomonas vesicatoria ATCC 35937] Length = 392 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 92/305 (30%), Gaps = 31/305 (10%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++Q R A+ +L + + G L+ A+ T+ + AP Sbjct: 88 GEVDRAIRLHQGLVQRADLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQ 147 Query: 190 VTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y ++W +AI ++ + + + + G + Sbjct: 148 ALRHLIGIYQAERDWEKAIDNATCYEEVTGEPMGKLISQFECELADRYRGLGKADEALQA 207 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHL 302 + + S+ A I + + A E+ + +P P + Y + Sbjct: 208 IARAYQADGTSVRAGILEGRIEAERGHDEAAVRAFERAARHDPEYLPEIIPALMAAYRRV 267 Query: 303 LSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + A E + + ++++ + A A +K P Sbjct: 268 GD------IAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSVR 321 Query: 360 IFLLLAQIEQANSHNT----DKILYWTQSALHAMPDPLWISDD---GYLSSVWLPLSPIS 412 L + A + + + + T L + +P + G + W P Sbjct: 322 GESALIDLTLAEGSDPVGTLNDLKHITDQLL--VRNPSYRCTRCGFGAKTHHWQ--CPSC 377 Query: 413 KTLCY 417 K Sbjct: 378 KEWGT 382 >gi|260913656|ref|ZP_05920132.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] gi|260632195|gb|EEX50370.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] Length = 396 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 106/348 (30%), Gaps = 78/348 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151 + A ++H + + + E LL Q + Y+ A +++ P Sbjct: 91 GEVDRALRIHQALDRNPDYSFEQ--KLLAKQ--QLAKDFMAIGFYDRAENLYILLVDEPD 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 +A AL + + Q Y KEW +AI Sbjct: 147 ------------------------FAEHAL----------QQLAQLYQKTKEWKKAINVT 172 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K A + + ++ + S ++LK+ + ASI + LI Sbjct: 173 EKLAKIAPKDDNVELAQYYCEYVKTLAINNKENSQTLLEQALKVSPKCVRASIQLGELLI 232 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 + + + A ILE + + E V K +L ++ E+ E +I Sbjct: 233 EKGEYQSAVNILENVLVQK---------ADYVGEILVPLRKCYHKLNQL--ENFEIFLIK 281 Query: 332 S---------KIALE--MGSID---QAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNT 375 + ++AL + ID A AK + P +F + QI+ A Sbjct: 282 ASQLVNNSAVELALVDLIQEIDGKTAAQAKLYQQLNRHPTALLFHRFIQFQIDDAEVGRG 341 Query: 376 DKILYWTQSAL--HAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + L + H + + W P ++ Sbjct: 342 KESLELLHKMVGEHIKQGTGYRCVKCGYHAHKLIW--CCPSCRSWETI 387 >gi|167910011|ref|ZP_02497102.1| hypothetical protein Bpse112_05926 [Burkholderia pseudomallei 112] Length = 105 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 1/103 (0%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V I + S + + L Sbjct: 3 LRGIIWLAVLFAIAAALATVGRFDTGQVLIVYPPYRIDVSLNFFVLAIIVAFIVLYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLA 103 + R P + + ++ AL L ++ A A Sbjct: 63 IVRNVWRMPQRVAAYRARMRNERAQAALRDALANLYAGRFSRA 105 >gi|56460460|ref|YP_155741.1| tetratricopeptide repeat protein [Idiomarina loihiensis L2TR] gi|56179470|gb|AAV82192.1| Predicted N-acetylglucosaminyl transferase [Idiomarina loihiensis L2TR] Length = 385 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 95/304 (31%), Gaps = 37/304 (12%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-- 187 + + A + + + +P R A+Y L + G + A++ A S Sbjct: 83 GEVDRAIKIHKNLTSLPNLSEHDRLTAMYELGKDYLSAGIYDRAEQMF--AGLQSYKLFR 140 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + +++ Y EW +AI + AK+ + R +L ++ + Sbjct: 141 EKSQKHLLELYESTHEWDKAIKI---ALRLAKQSSHARVVLAQLYCELAELDDNVPSKIK 197 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNK----KRKAEVILE--KIWKVNPHPEIANIYTH 301 ++LK N + A + K + + + + E K + P + Y Sbjct: 198 HYSKALKHDSNCVRAVLSLGKIHMKEGEYGESINYLTRVFEQDKSFVCETIPLLEEAY-- 255 Query: 302 LLSENTVGKLKRALRLEEINKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 E T L + + + + +S+ E SI+ A ++ P Sbjct: 256 ---EKTSDTHTFIEFLHSCVEHNAGITAAITLSEKICESQSIEDAEHFMTHVLEQHPTMR 312 Query: 360 IF-LLLAQIEQANSHNTDKILYWTQSALHAMPD-----PLWISDDGYLSSV---WLPLSP 410 F L+ +A + + + + P + S W P Sbjct: 313 GFHHLMGLHIRA--ADVGNARDSLRRLRKMVHEHIVQRPNYKCRHCGFSGHTLYWR--CP 368 Query: 411 ISKT 414 K+ Sbjct: 369 SCKS 372 >gi|323529611|ref|YP_004231763.1| cellulose synthase operon C domain-containing protein [Burkholderia sp. CCGE1001] gi|323386613|gb|ADX58703.1| cellulose synthase operon C domain protein [Burkholderia sp. CCGE1001] Length = 1616 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 73/215 (33%), Gaps = 26/215 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G M +A H+ A + + ++ + + + L+ A A + + Sbjct: 407 GEMLLANHDAAGAEQAYRMALRRQADNPDAIRGLVGALAAQGRGD--EALQFANQLNAEQ 464 Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 ++ + + GDL SA+ AL +PD PW+ + + YV Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-----------MIASYHDAIE 251 + A + ++ + L A +L +A+ D A DA+ Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQLERIPAAQRTDAMA 580 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 SL+ + AA+ + ++A +L Sbjct: 581 SLQHRLWVHQQAELAARM-AKSGQLQQALAMLRAA 614 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 43/134 (32%), Gaps = 4/134 (2%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL SA L PD P + A+ + Y A + A+ + + Sbjct: 711 RQRGDLASAYDVIAPWLAAMPDNPDLQAALGRLYATAGDDRNALESYRVALRRKPD---- 766 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LL A + + A E+L N + +Q K A L+ Sbjct: 767 DLNLLQAAISAASGARQFSYAESLAKEALNAAPNDPGVLATVGRMYRAQGKLSLASTYLQ 826 Query: 285 KIWKVNPHPEIANI 298 + P +AN Sbjct: 827 RSLVAANTPLMANA 840 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 59/225 (26%), Gaps = 32/225 (14%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE-WSRAITFLNQKKKNAKE---- 220 + G SA + +AL P P + Q + W A L Q ++ + Sbjct: 133 QSGQSASAVQEYQRALSGKPATPELQLEYYQALSATPQGWDEARRGLEQLARDNPDDPRY 192 Query: 221 ------------WNRNRAIL----LIARSLENADKGDMIASYHDAIESLKLCDNSIMA-- 262 R I L S A +++ A Sbjct: 193 ALAYAQHLTYRDVTRRDGIARLQKLAGDSTVGASAKKSWRQALLWLDARPSDSALYQAYL 252 Query: 263 ------SICAAKS--LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + A+ ++ Q++ + H IA+ + L + + Sbjct: 253 QSAGDDAAVKARFDSMVQQDRSTRERAQENAAVDARGH-LIADGFAALDRNDPTAARAKF 311 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + ++L + AL+ +A A + Sbjct: 312 SSVLASSPNDTDALGGMGIAALKQEHFAEARNYLERASRNGNPAR 356 Score = 37.6 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 90/324 (27%), Gaps = 46/324 (14%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-------LEVQ--IALAERQYN 137 ALY + A + + + S V Q + L AL Sbjct: 246 ALYQAYLQSAGDDAAVKARFDSMVQQDRSTRERAQENAAVDARGHLIADGFAALDRNDPT 305 Query: 138 IAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW------ 189 A K +L T + + + A+ Y +A A W Sbjct: 306 AARAKFSSVLASSPNDTDALGGMGIA--ALKQEHFAEARNYLERASRNGNPARWKTALDS 363 Query: 190 ------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 ++A + E ++A + + + +LL L N D Sbjct: 364 ATYWTYTSDA-IGARS-NGELAKAKSLFERAIAMNP-SDVTAQVLLGEMLLANHDAAGAE 420 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 +Y A+ ++I + A + ++ + L + A L Sbjct: 421 QAYRMALRRQADNPDAIRGLVGALAAQGRGDEALQFANQLNAEQQSK-----AGGINRLR 475 Query: 304 SENTVGK---------LKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAML 350 E + L A L E + + +++I + G++ A + Sbjct: 476 GEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQGAVANARSMMDG 535 Query: 351 AMKIAPRKEIFLLLAQIEQANSHN 374 + P L + + A + + Sbjct: 536 LLAAHPDMTDALYASALLSAETQD 559 >gi|251789345|ref|YP_003004066.1| tetratricopeptide repeat-containing protein [Dickeya zeae Ech1591] gi|247537966|gb|ACT06587.1| Tetratricopeptide domain protein [Dickeya zeae Ech1591] Length = 389 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 39/291 (13%), Positives = 91/291 (31%), Gaps = 56/291 (19%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H +++ + E LL VQ + Y+ A E + ++ R Sbjct: 83 GEVDRAIRIHQALTESASLSFEQ--RLLAVQQLGRDYMVAGLYDRAEEIFKQLVDEEDFR 140 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ + ++Q + +W AI + Sbjct: 141 VSAL----------------------------------QQLLQIHQSTSDWPNAIDTAEK 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K R+ A ++L+ D+ + ++ SI + ++ Sbjct: 167 LVKLGKTQLRSEIAHFYCEQALQAMGSDDLDKAVAMLKKASATDSQCARVSIMLGRIYMA 226 Query: 273 QNKKRKAEVILEKIWK------VNPHPEIANIYTHL-LSENTVGKLKR-ALRLEEINKES 324 Q +A +L+++ P + Y +L E L+R + + Sbjct: 227 QQNYPQAVAMLQQVLDQDTELVSETLPLLQECYRYLQQPEGWAAFLRRCVEEKSGSSAD- 285 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSH 373 ++++ + + S + A ++ P +F L + +A Sbjct: 286 ----LMMADVLEQYESTESAQTYVTRQLQRHPTMRVFHRLIDYHLREAEDG 332 >gi|224540741|ref|ZP_03681280.1| hypothetical protein BACCELL_05655 [Bacteroides cellulosilyticus DSM 14838] gi|224517640|gb|EEF86745.1| hypothetical protein BACCELL_05655 [Bacteroides cellulosilyticus DSM 14838] Length = 274 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 84/211 (39%), Gaps = 17/211 (8%) Query: 164 SCRIGDLNS-AQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKN 217 +C D + A+ Y +AL + P P A++ +++ +A+ Sbjct: 32 ACTEQDSLAQAENYIRQALKLEPANP--HNALLFSNLGTIQRRQRDYDQALESYTYALNI 89 Query: 218 AKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A RA+ +L+ R+ N + G + D L L ++ A + A ++Q Sbjct: 90 AP-----RAVPILLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQRDL 144 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIA 335 + A E++ K++P A + L + K L ++ E + + + V++ Sbjct: 145 KFARADYERLLKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAG 204 Query: 336 L--EMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + +M +D A A+K+ P + L+ Sbjct: 205 IEQDMQHVDLAMIDLEEALKLNPSQTEAYLM 235 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 7/165 (4%) Query: 124 LLEVQIALAE-RQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL E + A ++L RE + Y + DL A+ + L Sbjct: 97 LLNRAALNLEMGRNEQARVDYSLVLDLEKDNREALLMRAYIYVTQR-DLKFARADYERLL 155 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P + +A+ LN+ A L +AR+ D Sbjct: 156 KLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDP----QDAALYVARAGIEQDMQH 211 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + D E+LKL + A + + +SQ KK A+ EK Sbjct: 212 VDLAMIDLEEALKLNPSQTEAYLMRGQIYLSQKKKNLAKQDFEKA 256 Score = 36.8 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 63/172 (36%), Gaps = 13/172 (7%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++A ++ Q K + N + A+L + D + +L + ++ + Sbjct: 40 AQAENYIRQALK-LEPANPHNALLFSNLGTIQRRQRDYDQALESYTYALNIAPRAVPILL 98 Query: 265 CAAKSLISQNKKRKAEVI-------LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 A + + +A + LEK + + Y ++ + RL Sbjct: 99 NRAALNLEMGRNEQA-RVDYSLVLDLEKDNREA---LLMRAYIYVTQRDLKFARADYERL 154 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIE 368 +++ ++ + + ++ + + G++ +A + P +++ A IE Sbjct: 155 LKLDPQNYNARLGLATLEQKDGNLQKALEILNKMLVEDPQDAALYVARAGIE 206 >gi|170288929|ref|YP_001739167.1| TPR repeat-containing protein [Thermotoga sp. RQ2] gi|170176432|gb|ACB09484.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga sp. RQ2] Length = 357 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 85/221 (38%), Gaps = 13/221 (5%) Query: 136 YNIAHEKLEMMLQIPATREFA--VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y+IAH+ ++ ML I A + L E G + ++ KA++I P Sbjct: 113 YDIAHDIIKFMLDIDENYAPAYELKGSLLVE---QGKIEEGIKFLDKAVEIDPWLVQAYA 169 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ + Y ++ +AI + ++ E+N + I + + + Sbjct: 170 SLGEAYYNLGDYEKAIHYWEREL----EYNPSDKITYFMITEAYHEMNRKDLAVKALERL 225 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVG 309 L++ ++I A ++ + KA + EKI P +P + L Sbjct: 226 LEIDPDNIPALYQLSQLYRELGSEEKAREMEEKIMNCKPKYPTELEPWARVMLKHGRYKE 285 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ ++ E + + + +++ +++G ID+A Sbjct: 286 VVEELEKIVESSPLNTLARLLLVVPYVKLGQIDKAREILDD 326 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 9/158 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286 L +LE AD+ ++ L + +N A L+ Q K + L+K Sbjct: 100 LYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLDKAVE 159 Query: 287 ---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 W V + + Y +L + + R E N + ++++ EM D Sbjct: 160 IDPWLVQAYASLGEAYYNL--GDYEKAIHYWERELEYNPSDKITYFMITEAYHEMNRKDL 217 Query: 344 AHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 A ++I P L+Q+ + + +K Sbjct: 218 AVKALERLLEIDPDNIPALYQLSQLYR-ELGSEEKARE 254 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 65/172 (37%), Gaps = 17/172 (9%) Query: 199 VLAKEWSRAITFLNQKKKNAK--------EWNRNRAILLIARSLENADKGDMIASYHDAI 250 L + A+ + ++ + + + N A + ++G + Sbjct: 96 SLKGLYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLD 155 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLS 304 +++++ + A ++ + KA E+ + NP + I Y + Sbjct: 156 KAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPS-DKITYFMITEAYHEMNR 214 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ +K RL EI+ +++ +L +S++ E+GS ++A M P Sbjct: 215 KDLA--VKALERLLEIDPDNIPALYQLSQLYRELGSEEKAREMEEKIMNCKP 264 >gi|118365236|ref|XP_001015839.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89297606|gb|EAR95594.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 430 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 75/248 (30%), Gaps = 27/248 (10%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYA 177 YL I N A + + ++ T + + + Sbjct: 141 SYLFLADINEQMNNLNQAKKCYQEAIKINPKDDQTYLKL--GILNLKMELFEDTKQCYL- 197 Query: 178 TKALDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +AL I+ + + + + A E + AI + Sbjct: 198 -EALKINTLNTQAHNYLGLFYLQIKK------LKEAKNQILKALEIDPQLAITYVNLGKV 250 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 ++ + + +++LK+ A I K Q + A K +++P Sbjct: 251 YEEQDQLNDAVSSFLDALKIDPQLAPAYISLGKVQTKQGQLNNAVSNFLKALEIDPSMTY 310 Query: 292 -HPEIANIYTHLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + E+A +Y + +E L ++ L + I L+M + A Sbjct: 311 IYFELAYLYHEMNMLNEAKENYLNTLK----YYPDNFFGLFNLGIINLDMKMLSDAKRYL 366 Query: 349 MLAMKIAP 356 + A+KI P Sbjct: 367 LQALKIDP 374 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 13/155 (8%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I L KN L + L + S IE K+ + A A Sbjct: 23 IELLKNSLKNNP----QDIDTLSSLGLCYQIQKQYNESIQCLIECQKIAPQNYGAYFNLA 78 Query: 268 KSLISQNKKRKAEVILEKIWKVNP---HP--EIANIY-THLLSENTVGKLKRALRLEEIN 321 + ISQ K +A+ L + ++ P HP +++ IY + E ++ L+ N Sbjct: 79 QVYISQGKLEEAKKQLLRSLEIEPKYSHPYFQLSQIYYQQGMLEEAKQNIQNYLK---FN 135 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ES + ++ I +M +++QA A+KI P Sbjct: 136 PQHAESYLFLADINEQMNNLNQAKKCYQEAIKINP 170 >gi|67078506|ref|NP_001019924.1| interferon-induced protein with tetratricopeptide repeats 2 [Rattus norvegicus] gi|66910585|gb|AAH97384.1| Interferon-induced protein with tetratricopeptide repeats 2 [Rattus norvegicus] Length = 464 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 12/120 (10%) Query: 177 ATKALDISPDAPWVTE--AVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRAILLIA 231 KAL+ P P T A+ + +W + I L Q + + + +L + Sbjct: 161 FEKALEKDPKNPESTSGWAIANYRLD--DWPASNDYIDSLEQAISLSPDNTYVKVLLAM- 217 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + E+LK ++I + AAK + + +A +L+K + P Sbjct: 218 ----KLEEVHENRAKELVEEALKKDPSAIDTMLGAAKFYVKVHDTDRAIQLLKKALESMP 273 >gi|330722420|gb|EGH00263.1| TPR repeat protein [gamma proteobacterium IMCC2047] Length = 850 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 88/256 (34%), Gaps = 19/256 (7%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + L L+ +AL A+ E L + ++ ++ SL + A++Y Sbjct: 464 PDSPLPLSLKGSVALLMGDNVSANAAFESALVLNSSYVPSLRSLALLATFDEKYELAKQY 523 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +AL SP+ + E+ +A L + ++ L + Sbjct: 524 YEEALIASPNNVNIYHDYAGLLFKLGEFEQAEPILQKARELGNNVQGTAVTL----ARMY 579 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI- 295 + + + + + +L + I A + + + + A +K + ++ Sbjct: 580 LQQNNPSQALAE-LRALNASPS-IEALLEIGNAQMLLKEYSSALASYQKALEKGARDDLG 637 Query: 296 ----ANIYTHLLSENTVGKLKRALRLEEINKESVE---SLVIVSKIALEMGSIDQAHAKA 348 A L +++ + L +++ SL+ S++AL +D+A Sbjct: 638 YYLIATAQIALGDQDSAER-----SLAVSMEDNEVFLPSLIAASELALANRQLDKARGLI 692 Query: 349 MLAMKIAPRKEIFLLL 364 +AP + LL Sbjct: 693 NKLEAVAPEHQALKLL 708 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 89/282 (31%), Gaps = 22/282 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-----PAT 152 + A K+ + + + + V+LL I A+ A E + ++ Sbjct: 164 GELARALKLANASLEVDSSN--PKVWLLLADIRRAQGLSKKAIEAYQRTTEVAHSNQDYL 221 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-----LAKEWSRA 207 + A+ + E+ + + + A K A + +++ + Sbjct: 222 YQVAMRQILNENLKANETSKADETLAKLKASFYKQKMPKNAQLTHLRSVLAFQKQDYEAS 281 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 N +RN A L+ A +G + LKL I A A Sbjct: 282 AELANNVLA----IDRNHAGALLLVGTIAAIEGKYEQAEVSLERFLKLVPQHIQARKVLA 337 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322 + ++ N++ +A L I + P+ + E L LE + Sbjct: 338 YAQLNNNRQEQALETLHPIAEQEGAPDTQLLALIARAALRSGEAEQSSLYLRQALES-DP 396 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + E + +++ + DQA A+ A + LL Sbjct: 397 ANDEVRLALARSYILQRHFDQAIAELKSIKGSADSELSAQLL 438 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 46/169 (27%), Gaps = 13/169 (7%) Query: 95 IAAHNIPLARKMHSYVSQQH------TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 IAA + LA + ++ L LL+ + A+ + A + + + Sbjct: 673 IAASELALANRQLDKARGLINKLEAVAPEHQAL-KLLKAEQAMHLKDTQTAIKLYQQLYD 731 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + L G + A A P+ V Y +AI Sbjct: 732 KNPNLSV-LQKLVQAHWLAGQQDKALALLEVASQRYPNLAHVAYLQGTAYQAQGNTPKAI 790 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + + +L + + A ++ KL Sbjct: 791 GAYRRAIQLNEGH-----VLALNNLAWLLKDSTPREALDLAKKAAKLAP 834 >gi|95929509|ref|ZP_01312252.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] gi|95134625|gb|EAT16281.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684] Length = 259 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 50/157 (31%), Gaps = 6/157 (3%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A + E + A+ L D +A+ + +AL++ P ++ Sbjct: 89 AEARQTYERLADSADHAAEALVRLGLLCFSEQDYAAAKSHFDQALEVDPSCVAALNSLGD 148 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + + A + + + + + G + + A +++ L Sbjct: 149 LCQEHNDSAAAKKWYLKALS----VDDEDVEAAGNLAELFYETGQLEEAERYARQAVSLD 204 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEK--IWKVNP 291 A + + Q++++ A E W+ +P Sbjct: 205 PGYAPAWLTLGYLYLDQDREKDAARCFETFLRWEKSP 241 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 3/162 (1%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 +I ++ + ++G + + + ++ + A++ + RKA +LE+ Sbjct: 7 IIEQATDKLEQGQGRQAVDLLTRAHRQFSDNEEVIVLLAEAYAENRQPRKALQLLERFGS 66 Query: 289 VNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 +A + + + RL + + E+LV + + A Sbjct: 67 EAAAGAELVLALGDEYYAQDQVAEARQTYERLADSADHAAEALVRLGLLCFSEQDYAAAK 126 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + A+++ P L +++ W AL Sbjct: 127 SHFDQALEVDPSCVAALNSLGDLCQEHNDSAAAKKWYLKALS 168 >gi|323975061|gb|EGB70170.1| cellulose synthase operon protein C [Escherichia coli TW10509] Length = 1157 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 14/255 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ I L+ ++ + + + L ++ ++G Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ +A+ ++ + + P+ PE Y Sbjct: 477 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536 Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351 LS + + L L + N E + + V + A + + + Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAML 596 Query: 352 MKIAPRKEIFLLLAQ 366 + P I L LA Sbjct: 597 RQQPPSSRIDLTLAD 611 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|158522424|ref|YP_001530294.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511250|gb|ABW68217.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] Length = 593 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 60/213 (28%), Gaps = 7/213 (3%) Query: 28 VSITWGNRLY----RTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDK 83 V + WG R ++ L + + L A L+ L K + Sbjct: 379 VILVWGGHDIFKHNRHLLSFFVATLLVLVLGSMTLSWRQTAIWKNTATLYESLLKSGHRP 438 Query: 84 GYKALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 G + + A + H+ + L + L + A + + A Sbjct: 439 AEDVYTDLGNIMLGRGATDQAIVYYQKALA-HSPADPRLYHCLGLAHAR-KGAVSAALAA 496 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L + A +L G ++ A + AL P P + + Sbjct: 497 YHRALALNPDFALAHNNLANLLADTGQIDEAIDHYRAALAADPGQPEFYNNLATTLAQSG 556 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 AI L + E+ R L R +E Sbjct: 557 RIPEAIQHLEKALAIDPEYQTARKNLARLRVME 589 >gi|170726211|ref|YP_001760237.1| serine/threonine protein kinase [Shewanella woodyi ATCC 51908] gi|169811558|gb|ACA86142.1| serine/threonine protein kinase [Shewanella woodyi ATCC 51908] Length = 922 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 97/315 (30%), Gaps = 49/315 (15%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL--AERQYNIAHEKL 143 +A+ ++I + A K + Q+ L+E+Q L A Q A Sbjct: 620 QAIDQFAIAITTNEFEQAEKQLTIAKQRGADE----TVLIELQAYLFLASNQLKQAINTY 675 Query: 144 -EMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + P+T+ LY + D ++ L I+P + + + + Sbjct: 676 QKALSLRPSTKL-----LYNLALSYWWQSDSIHTKKTLKTLLSINPKHYFANQLLADISL 730 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + + +AI K N++I + L A G + A ++ N Sbjct: 731 IEGDLEQAIALYVPLVKTN-----NQSIDISNLGLSYALSGKYQQALKMAQLAVDSSPNH 785 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + A + K + + ++ L L + Sbjct: 786 PNWVLNLADIQLILGKTSQ----------------------------STTNYRQVLALTQ 817 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 + SL++ ++ + + A +A K+ P L+A I L Sbjct: 818 GQSD-RVSLLLSAQAYAHLKEYNSAIKVINMAKKLNPDDGEVSLVAAIVYTRIGEHISAL 876 Query: 380 YWTQSALHAMPDPLW 394 + AL++ W Sbjct: 877 SQVEEALNSNIGAAW 891 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 19/187 (10%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFAV-YSLYFESCRIGDLNSAQRY 176 L I+L E A +++ + Y+L G A + Sbjct: 721 ANQLLADISLIEGDLEQAIALYVPLVKTNNQSIDISNLGLSYAL------SGKYQQALKM 774 Query: 177 ATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A A+D SP+ P WV + ++ + S++ T Q + + ++LL A++ Sbjct: 775 AQLAVDSSPNHPNWVLN-LADIQLILGKTSQSTTNYRQVLALTQGQSDRVSLLLSAQAYA 833 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + + + + + KL + S+ AA + A +E+ N I Sbjct: 834 HLKEYNS--AIKVINMAKKLNPDDGEVSLVAAIVYTRIGEHISALSQVEEALNSN----I 887 Query: 296 ANIYTHL 302 + +L Sbjct: 888 GAAWFNL 894 >gi|332212284|ref|XP_003255249.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 2 isoform 2 [Nomascus leucogenys] Length = 483 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 37/220 (16%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 165 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 224 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + + E+L+ AAK +++ KA +L+K Sbjct: 225 LLALKLHKMHEEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 284 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLE--EINKESVESLVIVSKIALEMG 339 + P H +I Y RA L+ + + + + ++ Sbjct: 285 LEYIPNNAYLHCQIGCCY-------------RAKVLQVMNLRENGMHGKRKLLEL----- 326 Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 I A A A + + +LA + E+A Sbjct: 327 -IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 365 >gi|260553979|ref|ZP_05826244.1| tetratricopeptide repeat family protein [Acinetobacter sp. RUH2624] gi|260404865|gb|EEW98370.1| tetratricopeptide repeat family protein [Acinetobacter sp. RUH2624] Length = 569 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 68/167 (40%), Gaps = 2/167 (1%) Query: 223 RNRAILLIARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R+ + + R+L+ + D+ A+ + AI + + A + + ++ + A Sbjct: 75 RSNSTTIKQRALDVALEYNDLQAALNIAIHWVVQEPKDVPALFYLSHIALKTHEYQLAAE 134 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGS 340 L+KI K++P ++ I + EN + L KE+ L +++ + + G Sbjct: 135 TLDKILKIDPTADLEQILASIAPENAQDREVLLTALRSSAEKENPSILALIANLEAQNGQ 194 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 ++ A A++ P+ F+L+ + + L W + Sbjct: 195 LEPALNTINRALRRRPKVTSFILMKANLLIALSDQEGALKWYAKSSR 241 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321 A+ L K+ A +L++ K P PE+ IY +L KL K +L ++ Sbjct: 389 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 446 Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 S L + +AL+ + +A A A++ AP + L Sbjct: 447 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 488 >gi|192360667|ref|YP_001983749.1| putative serine/threonine protein kinase [Cellvibrio japonicus Ueda107] gi|190686832|gb|ACE84510.1| putative serine/threonine protein kinase [Cellvibrio japonicus Ueda107] Length = 892 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 6/163 (3%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 ++ L L+ + A+ Y A E +++++ T +L G L+SA+ Sbjct: 620 DDALQLFLKANLYQAKNDYQKAIETYRILVKLKPT-AINYQNLAIAYWYSGKLDSAKTNL 678 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 TKAL +SP + + + + AI + R + + + Sbjct: 679 TKALSLSPLSYKANQIRGAIALSEGDTQSAIVSFGK-----ITDKRKNPTDISNLGIAHL 733 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 G++ A+ ++ +L N+I+ + A + + +K++A Sbjct: 734 LAGNLDAAALYLAQAHQLAPNNIVILLNWADAENLRGEKQQAT 776 >gi|39996268|ref|NP_952219.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39983148|gb|AAR34542.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|298505281|gb|ADI84004.1| TPR domain protein [Geobacter sulfurreducens KN400] Length = 266 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 67/233 (28%), Gaps = 40/233 (17%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 + L G+ + A M + + + L + + E + A ++ E Sbjct: 7 ELLAKGISLAEGGDFTAAEAMFRTCV-ERAPDDPEGYFYL-GEALVEEGKLAEARQQYEK 64 Query: 146 MLQIPATREFAVYSL----------------YFESCRI------------------GDLN 171 L + +L Y + + + + Sbjct: 65 GLALAPGDVDGQIALGDICLELAEHEAALAAYRRAVELDPRNADGYVNIGLVYNSLEETS 124 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A KAL+I P + + + E +AI + E + A Sbjct: 125 KAIEAFEKALEIDPANVFAYNGLGDAWYGLGEREKAIDAFRK----GIELDPTDAAAHFN 180 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 D G+ + + +E+++L + M+ + + + + A LE Sbjct: 181 LGELYYDLGETEEAEKECLEAVRLDPDFTMSYLTLGSLYMDDERVKDAIRYLE 233 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 15/204 (7%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD +A+ ++ +PD P + + V + + A + + + I Sbjct: 19 GDFTAAEAMFRTCVERAPDDPEGYFYLGEALVEEGKLAEARQQYEKGL-ALAPGDVDGQI 77 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L LE A+ +A+Y A+E L + + S + KA EK Sbjct: 78 ALGDICLELAEHEAALAAYRRAVE---LDPRNADGYVNIGLVYNSLEETSKAIEAFEKAL 134 Query: 288 KVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +++P A Y E + + E++ + + ++ ++G Sbjct: 135 EIDPANVFAYNGLGDAWYGLGEREKAID---AFRKGIELDPTDAAAHFNLGELYYDLGET 191 Query: 342 DQAHAKAMLAMKIAP--RKEIFLL 363 ++A + + A+++ P L Sbjct: 192 EEAEKECLEAVRLDPDFTMSYLTL 215 >gi|307301551|ref|ZP_07581311.1| FecR protein [Sinorhizobium meliloti BL225C] gi|306903608|gb|EFN34196.1| FecR protein [Sinorhizobium meliloti BL225C] Length = 1202 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 7/162 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 DL A +AL +P + + ++ + A K A + Sbjct: 421 DNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAA----EAAFKQAIALDPLDP 476 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +++ D+ M + + +L + + +A + + + + KA L Sbjct: 477 VSHANLAIQYMDEMRMAEAKREIDTALSVDPSFDVALVARGRYHMQNGEADKAVEDLLAG 536 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESV 325 NP A + ++ A L + ++ Sbjct: 537 STANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPNDP 578 >gi|293334567|ref|NP_001167956.1| hypothetical protein LOC100381672 [Zea mays] gi|223945123|gb|ACN26645.1| unknown [Zea mays] Length = 1009 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 74/243 (30%), Gaps = 20/243 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181 LL + E + P Y + GD++ A RY A+ Sbjct: 123 LLLGAIYYQIRNYDMCIAKNEEALAIDPH--FAECYGNMANAWKEKGDIDLAIRYYLTAI 180 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P+ + Y + A Q +G Sbjct: 181 QLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINP----RLVDAHSNLGNLMKAQGF 236 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +Y IE+L++ + +A A + KA + ++ K+ P A+ Y + Sbjct: 237 IQEAYSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLK--PSFADAYLN 294 Query: 302 --------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + ++ + +RA + + + ++ I E G +D A A+ Sbjct: 295 QGNVYKALGMPQDAIMCYQRA---LQARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIV 351 Query: 354 IAP 356 P Sbjct: 352 YDP 354 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 18/188 (9%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP--A 151 + A + + + L L++ Q A+ E + P A Sbjct: 201 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYSCYIEALRIDPHFA 255 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L+ E+ GDL+ A Y +A+ + P Y AI Sbjct: 256 IAWSNLAGLFMEA---GDLDKALMYYKEAVKLKPSFADAYLNQGNVYKALGMPQDAIMCY 312 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + ++ A+ + ++G + + +++ I A +L Sbjct: 313 QRALQARPDY----AMAYGNLATIYYEQGQLDMAIRCYNQAIVYDPQFIEAYNNMGNALK 368 Query: 272 SQNKKRKA 279 + +A Sbjct: 369 DAGRVEEA 376 >gi|218782228|ref|YP_002433546.1| hypothetical protein Dalk_4399 [Desulfatibacillum alkenivorans AK-01] gi|218763612|gb|ACL06078.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 268 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 4/138 (2%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G A + +A+D++P + Y+ EW +AI N Sbjct: 91 LTLGRPQEAVEHFQRAVDLNPGYLNAQNNLGCAYLELAEWDKAIEVFKDLLANLTYPTPW 150 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + + +KGDM A+ + S+ N + + + +KA + LE Sbjct: 151 KPAANLGWA--YFNKGDMDAALEYYLMSVDQSPNYAIGWRGLGQVYMETGNPQKAVISLE 208 Query: 285 KIWKVNPHPEIANIYTHL 302 K P+ A Y L Sbjct: 209 KALVAA--PQFAEAYYDL 224 >gi|157145618|ref|YP_001452937.1| tetratricopeptide repeat protein [Citrobacter koseri ATCC BAA-895] gi|157082823|gb|ABV12501.1| hypothetical protein CKO_01364 [Citrobacter koseri ATCC BAA-895] Length = 389 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 92/282 (32%), Gaps = 57/282 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL VQ +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 R+G + ++Q Y +W +AI + Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSDWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L+ DM + + NS SI + ++ Sbjct: 167 LVKLGKDKQRIEIAHFYCELALQQMGCDDMDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKE 323 + + KA L+++ ++ E+ + + ++ L+RA E N Sbjct: 227 KGEYAKAVESLQRV--ISQDKELVSETLEMLQTCYQQLGKNDEWAEFLRRA---VEENTG 281 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 + + ++++ I D A ++ P +F L+ Sbjct: 282 AA-AELMLADILEAREGHDTAQVYITRQLQRHPTMRVFHKLM 322 >gi|224369058|ref|YP_002603222.1| tetratricopeptide repeat protein (TPR family protein) [Desulfobacterium autotrophicum HRM2] gi|223691775|gb|ACN15058.1| tetratricopeptide repeat protein (TPR family protein) [Desulfobacterium autotrophicum HRM2] Length = 787 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 78/230 (33%), Gaps = 43/230 (18%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYN 137 KGY G ++++ +I A++ + + + T E L L A E Sbjct: 568 RAKGYIYFLLGKIAVSDKSIDQAKQYFNKSIKTYGKTTPSYEALAKL-----AEIENNNF 622 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 +A + E++L + A +L D N A+ Y T AL++ D P + Sbjct: 623 MAIKYYELILSYDSRYFPAYMNLSRLYQSKNDTNKAKEYLTTALEMKDDLPTAANDLAYI 682 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM------------IAS 245 N + L +A+ E+ D + Sbjct: 683 LAEEG-------------------NELQKALHLAQIAESQTPNDPNILDTLGWVYYKQRA 723 Query: 246 YHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 Y AI ES+KL +S + + + + KA ++ K+NP Sbjct: 724 YDLAIFKLTESIKLNPDSAFSHLHIGWAYYDTGRYEKAREHMKIALKLNP 773 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 8/142 (5%) Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKA 279 ++ + S K D + +L++ D+ A+ A L + +KA Sbjct: 634 YDSRYFPAYMNLSRLYQSKNDTNKAKEYLTTALEMKDDLPTAANDLAYILAEEGNELQKA 693 Query: 280 EVILEKIWKVNPH-PEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + + P+ P I + Y + + + K + ++N +S S + + Sbjct: 694 LHLAQIAESQTPNDPNILDTLGWVYYKQRAYD-LAIFKLTESI-KLNPDSAFSHLHIGWA 751 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 + G ++A +A+K+ P Sbjct: 752 YYDTGRYEKAREHMKIALKLNP 773 >gi|24985101|gb|AAN69052.1|AE016538_1 hypothetical protein PP_3450 [Pseudomonas putida KT2440] Length = 801 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 15/143 (10%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQR 175 + L A A + R A + GD ++A+R Sbjct: 291 DPGNRLPLAYALEAAGDSETAQPIWRSLPDSAFTDNARLTAARG----ALNAGDADAARR 346 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 Y A S W A + + + A+ F Q ++ + A A+ Sbjct: 347 YWDAAAHQS-ADDWALGAAIAER--QGDPQAALGFQRQALAHSPRPDHYYAASSTAQL-- 401 Query: 236 NADKGDMIASYHDAIESLKLCDN 258 GD S E+++L + Sbjct: 402 ---AGDSAQSTAWLAEAVRLAPD 421 Score = 38.0 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 13/134 (9%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATRE 154 AA + A+ + + N L + AL + A + Q Sbjct: 304 AAGDSETAQPIWRSLPDSAFTDNARLT---AARGALNAGDADAARRYWDAAAHQSADDWA 360 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLN 212 + R GD +A + +AL SP + + Q A + +++ +L Sbjct: 361 LG----AAIAERQGDPQAALGFQRQALAHSPRPDHYYAASSTAQL---AGDSAQSTAWLA 413 Query: 213 QKKKNAKEWNRNRA 226 + + A + R RA Sbjct: 414 EAVRLAPDQPRYRA 427 >gi|88809832|ref|ZP_01125338.1| TPR domain protein [Synechococcus sp. WH 7805] gi|88786216|gb|EAR17377.1| TPR domain protein [Synechococcus sp. WH 7805] Length = 890 Score = 48.4 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 79/236 (33%), Gaps = 22/236 (9%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 ++ + + P T + +L + A++ + L ++P+ + Sbjct: 218 WDRSVQAYLGKWSEPQTLFRSARAL----EKAQAWPEAEQLYRQLLQLTPNHGPAQLQLA 273 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENADKGDMIASYHDAIESL 253 AI L+ + N RA R +GD+ + D E+L Sbjct: 274 NVLHRQNRPLEAIRSLDALLQTTDSSCSNGLRARAQTNRGALRQLQGDLDGAVADHSEAL 333 Query: 254 KLCDNSIMA--SICA-AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVG 309 +L + +A ++ A A L S R+A L I + P P++ L +T+ Sbjct: 334 RLEPSLTIAGDNLLALALQLRSLGFTRQALEALRVILRATPQRPDLL-----LQLGSTLM 388 Query: 310 KLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +L R RL E E + + +G + A +AP Sbjct: 389 ELGRVEAAVPCFRRLLRQRPELPEGHYQLGQALAALGHTEAGLHALNTAHTLAPEA 444 >gi|300865160|ref|ZP_07109984.1| hypothetical protein OSCI_1490020 [Oscillatoria sp. PCC 6506] gi|300336850|emb|CBN55134.1| hypothetical protein OSCI_1490020 [Oscillatoria sp. PCC 6506] Length = 939 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 13/201 (6%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E+ ++ D +A + L+++ + W + + W+ AI + Sbjct: 16 LQEAEKLEDKIAAY---RRGLELNSNDSWTHHHLGENLAKLGRWNEAIVAFCDAITLKPD 72 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 ++ + L A + + + D IA++ A+E L + SL + +A Sbjct: 73 FSWSYHHLGDALAQQQQWE-DSIAAFRKALE---LNPEHYGTYVGLGNSLAKLGQWDEAI 128 Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 + ++NP H +AN + + ++ E N + ES + +I Sbjct: 129 AAYSRASELNPDADWIHFALANAVQQRNQFYLAKDIPSSSQIIECNPD-EESFQRLGEIY 187 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 ++G D A A A+++ P Sbjct: 188 FQLGQWDDAIATYRRAVELNP 208 >gi|161378127|ref|NP_745588.2| hypothetical protein PP_3450 [Pseudomonas putida KT2440] Length = 879 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 15/143 (10%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQR 175 + L A A + R A + GD ++A+R Sbjct: 369 DPGNRLPLAYALEAAGDSETAQPIWRSLPDSAFTDNARLTAARG----ALNAGDADAARR 424 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 Y A S W A + + + A+ F Q ++ + A A+ Sbjct: 425 YWDAAAHQS-ADDWALGAAIAER--QGDPQAALGFQRQALAHSPRPDHYYAASSTAQL-- 479 Query: 236 NADKGDMIASYHDAIESLKLCDN 258 GD S E+++L + Sbjct: 480 ---AGDSAQSTAWLAEAVRLAPD 499 Score = 38.0 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 13/134 (9%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATRE 154 AA + A+ + + N L + AL + A + Q Sbjct: 382 AAGDSETAQPIWRSLPDSAFTDNARLT---AARGALNAGDADAARRYWDAAAHQSADDWA 438 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLN 212 + R GD +A + +AL SP + + Q A + +++ +L Sbjct: 439 LG----AAIAERQGDPQAALGFQRQALAHSPRPDHYYAASSTAQL---AGDSAQSTAWLA 491 Query: 213 QKKKNAKEWNRNRA 226 + + A + R RA Sbjct: 492 EAVRLAPDQPRYRA 505 >gi|88704012|ref|ZP_01101727.1| TPR domain protein [Congregibacter litoralis KT71] gi|88701839|gb|EAQ98943.1| TPR domain protein [Congregibacter litoralis KT71] Length = 925 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 71/219 (32%), Gaps = 9/219 (4%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G N+A A +P++ + + + + + AI + + Sbjct: 41 ALAEGRDNAALIDVRAAQQQAPNSREARRLLSEIEMWRQNPTAAIEEAERALQGGAPTPA 100 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L + S+K + A++ S KA + Sbjct: 101 ILITLAKSLIKGRRYSDFDALVADGTFTSIKDDPRYLS---LLARAQASWGDSAKARATI 157 Query: 284 EKIWKVNPH-PEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMG 339 + + P P++A+ Y L EN + + R + + E + + + + Sbjct: 158 NQALEKAPSDPDVASAYALLTIENNMTLKEAMGRLEESVTKHPLAYEVWSALGILQITLK 217 Query: 340 SIDQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTD 376 + D M ++KI P + +LL + ++ ++ Sbjct: 218 NYDAGADAFMESLKINPYRLTDRYLLADALIRSQRYDEA 256 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 71/207 (34%), Gaps = 9/207 (4%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +A+ + A++I P A+ + + + A+ + + N Sbjct: 489 DEPNAEAHYEHAIEIEPGNKPANSALAEMRLKDGNYREALAL----YRTILASHENDLDT 544 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL---EK 285 LI + + GD + +++ + S + A+ ++ + ++ E Sbjct: 545 LIRIAAVQSAMGDPKSMESTLLQAYEAHPASARPPLSLARYYVANKRYNDTVRLISSFEG 604 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 +P +H+ T + A R++++ + ++ ++ + + A Sbjct: 605 NGAADPRLYALLAQSHMAMGETSSAVAAAKRMQKVEPTNALGFILEARALVGGEKLAAAT 664 Query: 346 AKAMLAMKIA--PRKEIFLLLAQIEQA 370 A+KI P L+ A + Sbjct: 665 DALREALKINNSPAIRSELITALLLDG 691 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 90/309 (29%), Gaps = 53/309 (17%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L +A+ + + + E +L I + + G + A A Sbjct: 375 AKQLLATALIAQGRNAESTKLYEELLSINPKSTANIVQYSSVLNKSGKRDQAIEQLKTAR 434 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++P + V +V + + A + + + + A +L R D+ + Sbjct: 435 KLAPGSAEVRARLVSFLLSDGREAEAEQEVASYLDDYSD--KAVAHVLAGRFAYVIDEPN 492 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI------------------- 282 A Y AIE + + A+ A+ + R+A + Sbjct: 493 AEAHYEHAIE---IEPGNKPANSALAEMRLKDGNYREALALYRTILASHENDLDTLIRIA 549 Query: 283 ---------------LEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINK 322 L + ++ +P +A Y N +L E Sbjct: 550 AVQSAMGDPKSMESTLLQAYEAHPASARPPLSLARYYVANKRYNDTVRL--ISSFEGNGA 607 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 ++++ + MG A A A K+ P + +L +A Sbjct: 608 ADPRLYALLAQSHMAMGETSSAVAAAKRMQKVEPTNALGFILEA--RALVGGEK-----L 660 Query: 383 QSALHAMPD 391 +A A+ + Sbjct: 661 AAATDALRE 669 >gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 1107 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 10/183 (5%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A KAL+I P + Y K++ AI + L + Sbjct: 450 AAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQINP--KNLDLYLNMG 507 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L + + + L + ++ A + + ++A E+ K+ Sbjct: 508 FALVKLN--HHQEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAIENYEQAIKIK- 564 Query: 292 HPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ A IY L + + + E+N +E+ + + ++ +A Sbjct: 565 -PDWAEIYCRLAHIQKQDQPQVAIANLEKSIELNPNYIEAHQQLCDLLSHSTNLTKARKA 623 Query: 348 AML 350 A Sbjct: 624 ADQ 626 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 4/125 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E G SA +AL I+P + + + + +VL + I + + Sbjct: 14 IEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQTAVNLKPNF 73 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A+ ++ + + + E+L + A + +A Sbjct: 74 ----AVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRFSEAIQ 129 Query: 282 ILEKI 286 +K Sbjct: 130 CYQKA 134 >gi|121998312|ref|YP_001003099.1| hypothetical protein Hhal_1530 [Halorhodospira halophila SL1] gi|121589717|gb|ABM62297.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila SL1] Length = 873 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 44/356 (12%), Positives = 97/356 (27%), Gaps = 69/356 (19%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----------------ALAERQYNIAHE 141 + V+ H +E LL + AL A Sbjct: 108 GEAKARVFAYRAVAAYHRGDDEAGSELLTAAVSEAADLPELELAKAFGALVAGDRAQAAS 167 Query: 142 KLEMMLQIPA------------TREFAVYSLYFES----------------------CRI 167 LE + + E+ R Sbjct: 168 HLEAAVALDEDYYPAWTLRGSLAEVVGERQSAREAFDRAVDLRPDYVSDRFSRAMVRLRE 227 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW-SRAITFLNQKKKNAKEWNRNRA 226 D A+ A + ++ +P ++ L + A T + +E+ R Sbjct: 228 EDFEGARADAEQLVEGAPGFA-GGYFLMGLVELEGDSPDEARTQFEEALARQREYRPARP 286 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + ++G++ + H S+ + A+ ++Q++ +A +L + Sbjct: 287 YL----AGLELERGNLAQAEHHLNRYHASGPGSVTSYTLRARLYMAQDQPEEAREVLSEA 342 Query: 287 ------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 W + +Y + + ++ R+ + +++E+ ++ L G Sbjct: 343 LAERPEWVSELGDRLGALYLD--TGDVESGIQTLRRVLDAQPDALETREVLGTALLLAGD 400 Query: 341 IDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 ++ + L+ A IE TQ A DP+ Sbjct: 401 EEKGLEELEAVASADGALRAADLTLVQAYIEAGRFEAAAVAAERTQD--KAPEDPV 454 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 82/256 (32%), Gaps = 19/256 (7%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDI--SPDAPW 189 +Y A LQ T E + GD ++A + T+AL+ P Sbjct: 25 AGEYRAAVLDYRNALQKVETPET--RGQLGLAYAGDGDTDAAINHLTRALEQGAEPKRYA 82 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 T A + + + + +A + R++ +GD A Sbjct: 83 PTLARLYHETRQH---GELVDFEYEALEGEA----KARVFAYRAVAAYHRGDDEAGSELL 135 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN----PHPEIANIYTHLLSE 305 ++ + + A + + +A LE ++ P + ++ E Sbjct: 136 TAAVSEAADLPELELAKAFGALVAGDRAQAASHLEAAVALDEDYYPAWTLRGSLAEVVGE 195 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL 364 + + R ++ + V + + L + A A A ++ AP + L+ Sbjct: 196 RQSAR-EAFDRAVDLRPDYVSDRFSRAMVRLREEDFEGARADAEQLVEGAPGFAGGYFLM 254 Query: 365 AQIE-QANSHNTDKIL 379 +E + +S + + Sbjct: 255 GLVELEGDSPDEARTQ 270 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 91/297 (30%), Gaps = 16/297 (5%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP----ATREFA 156 AR++ S + L L + L + L +L TRE Sbjct: 333 EEAREVLSEALAERPEWVSELGDRLGA-LYLDTGDVESGIQTLRRVLDAQPDALETREVL 391 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L GD +VQ Y+ A + A + + Sbjct: 392 GTALLL----AGDEEKGLEELEAVASADGALRAADLTLVQAYIEAGRFEAAAVAAERTQD 447 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A E + R+ +GD + E L+ +S ++ + ++ + Sbjct: 448 KAPE----DPVGYNLRAAVLLGQGDRPGARRVLREGLEAVPDSADLAMNLSSLERARGEA 503 Query: 277 RKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSK 333 +L + + P P +A + ++ L + E E + L ++ Sbjct: 504 EAGIEVLRGVHQAVPDEPRVAMRLAEWLIQMDSAAEGLSVLEQTLEERPEDAQFLGEAAR 563 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 I G +A A ++ P L + +A + + + +SAL A P Sbjct: 564 IYGMAGEDREARRLLERATELDPDAADLHYLLALARAAAGDEQGSVEALESALSADP 620 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 76/251 (30%), Gaps = 8/251 (3%) Query: 131 LAERQY-NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 E + A + E L A L G+L A+ + + P + Sbjct: 258 ELEGDSPDEARTQFEEALARQREYRPARPYLAGLELERGNLAQAEHHLNRYHASGPGSVT 317 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y+ + A L++ EW L A L+ D I + Sbjct: 318 SYTLRARLYMAQDQPEEAREVLSEALAERPEWVSELGDRLGALYLDTGDVESGIQTLRRV 377 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSEN 306 +++ +++ +L+ + K LE + + ++ + ++ + Sbjct: 378 LDAQ---PDALETREVLGTALLLAGDEEKGLEELEAVASADGALRAADLTLVQAYIEAGR 434 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LA 365 A R ++ E + + + L G A ++ P + L+ Sbjct: 435 FEAAAVAAERTQDKAPEDPVGYNLRAAVLLGQGDRPGARRVLREGLEAVPDSADLAMNLS 494 Query: 366 QIEQANSHNTD 376 +E+A Sbjct: 495 SLERARGEAEA 505 Score = 39.9 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 76/258 (29%), Gaps = 14/258 (5%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 + + S L + Q + ++ A E Sbjct: 408 LEAVASADGALRAADLTLV---QAYIEAGRFEAAAVAAERTQDKAPEDPVGYNLRAAVLL 464 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD A+R + L+ PD+ + + E I L + + R Sbjct: 465 GQGDRPGARRVLREGLEAVPDSADLAMNLSSLERARGEAEAGIEVLRGVHQAVPDEPRV- 523 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ L ++ + ++ +E + AA+ + R+A +LE+ Sbjct: 524 AMRLAEWLIQMDSAAEGLSVLEQTLEERPEDAQFL---GEAARIYGMAGEDREARRLLER 580 Query: 286 IWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +++ P+ A+++ + + G ++ + + S+ G Sbjct: 581 ATELD--PDAADLHYLLALARAAAGDEQGSVEALESALSADPSHYSAAHARSRQLARQGQ 638 Query: 341 IDQAHAKAMLAMKIAPRK 358 ++A + P Sbjct: 639 REEAEEVFAPVAEANPDA 656 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 51/370 (13%), Positives = 107/370 (28%), Gaps = 44/370 (11%) Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 E + R FA + GD + T A+ + D P + A ++A Sbjct: 103 YEALEGEAKARVFAYR--AVAAYHRGDDEAGSELLTAAVSEAADLPELELAKAFGALVAG 160 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261 + ++A + L +++ R G+ ++ ++ L + + Sbjct: 161 DRAQAASHLEAAVALDEDYYP----AWTLRGSLAEVVGERQSAREAFDRAVDLRPDYVSD 216 Query: 262 ---ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKR 313 ++ + + + AE ++E P A Y L ++ + Sbjct: 217 RFSRAMVRLREEDFEGARADAEQLVEGA------PGFAGGYFLMGLVELEGDSPDEARTQ 270 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372 +E + ++ + LE G++ QA P + L A++ A Sbjct: 271 FEEALARQREYRPARPYLAGLELERGNLAQAEHHLNRYHASGPGSVTSYTLRARLYMAQD 330 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISK---------------TLCY 417 + AL A P W+S+ G L + Sbjct: 331 QPEE-AREVLSEAL-AER-PEWVSELG---DRLGALYLDTGDVESGIQTLRRVLDAQPDA 384 Query: 418 FEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPL 477 E + + + LE L + + + FE + + Sbjct: 385 LE-TREVLGTALLLAGDEEKGLEELEAVASADGALRAADLTLVQAYIEAGRFEAAAVAAE 443 Query: 478 DPHIRQPDDP 487 + P+DP Sbjct: 444 RTQDKAPEDP 453 >gi|328951923|ref|YP_004369257.1| FecR protein [Desulfobacca acetoxidans DSM 11109] gi|328452247|gb|AEB08076.1| FecR protein [Desulfobacca acetoxidans DSM 11109] Length = 1207 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 86/267 (32%), Gaps = 48/267 (17%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G L+ AQ+ A L P+ P + + A + ++ +W Sbjct: 271 AYDQGRLSEAQQLAEHVLQQVPEQPLALTLLGWINLQNHRPQEAAALFEK--VSSPDWR- 327 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 LI +SL +GD + +Y + + S ++ + + K +A+ L Sbjct: 328 ----CLIGQSLARYRRGDPVGAYKLFDQGRRGLPPSPFLAVMSGYFTLMVGKASEAQREL 383 Query: 284 EKIWKVNPHPE---------------------IANIYTHLLS------------------ 304 + + P P +A L Sbjct: 384 AAVANLPPSPAVVLARSLLAQIHIVQNRKDAALAEACQALAQAPGSPLAHLTMGLVKISF 443 Query: 305 -ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + T +L + ++ V+ + ++++ L + +A A+++APR+ L Sbjct: 444 FDQTAARLH-FEKALALDPGLVDGYLYLARLWLGADHLARAWQTVSQALRLAPREGEVLS 502 Query: 364 LAQIEQANSHNTDKILYWTQSALHAMP 390 LA + + + A+ A P Sbjct: 503 LAGFIRLAYRDYAGACQFFHQAIAANP 529 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 38/340 (11%), Positives = 106/340 (31%), Gaps = 22/340 (6%) Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYD---KGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112 ++ +++R+ P + + + + A+ +G ++ A++ + V+ Sbjct: 329 LIGQSLARYRRGDPVGAYKLFDQGRRGLPPSPFLAVMSGYFTLMVGKASEAQRELAAVAN 388 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAV-YSLYFESCRIGDL 170 L L QI + + + + A E + + Q P + + L D Sbjct: 389 LPPSPAVVLARSLLAQIHIVQNRKDAALAEACQALAQAPGSPLAHLTMGLV--KISFFDQ 446 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +A+ + KAL + P + + ++ A +RA ++Q + A +L Sbjct: 447 TAARLHFEKALALDPGLVDGYLYLARLWLGADHLARAWQTVSQALRLAP----REGEVLS 502 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 D + +++ + K +A + ++ Sbjct: 503 LAGFIRLAYRDYAGACQFFHQAIAANPRFGEPHLGLGIYYFRHRKNPQALTEMLTATLLD 562 Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P E+ + + + + L+ ++ + ++ +A Sbjct: 563 PRVSSYQSELGKAFYQVRAFDKA--LEVYDYAAALDPRDPTPHLYKGIALSDLYRPGEAI 620 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + ++ + IF +++ + Y A Sbjct: 621 QEINRSIALNDNAAIFRTRLALDR----DLAVRNYNLARA 656 >gi|313219488|emb|CBY30412.1| unnamed protein product [Oikopleura dioica] Length = 870 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 98/292 (33%), Gaps = 39/292 (13%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNI----AHEKLEMMLQIPATRE 154 A K++ + LV L Q + A + E L+I T E Sbjct: 596 YEEAIKVYEQAIALEPLNPNPLVNLAWVKQTLGISSGSSRMVRDAEQLYEQSLRIKPTSE 655 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFL 211 + L + G+ + A +A + P V++ V A E RA+ L Sbjct: 656 AFMR-LGSLKYQRGETSEANLEYEEARKLDP---ENHMIVLEYSIVLVSAGETERALEIL 711 Query: 212 NQKKKNAKEWNRNRAILLIA-----RSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 K+ + +A R + ++ + H IE K D A Sbjct: 712 QVAVSKDKDCKLANLHITLAKIYGPRKHQFMKAASVLENCHREIEENKHEDE------IA 765 Query: 267 AKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A+ R + + NP + + T+ L+ A++L Sbjct: 766 AEIKFQLGAMYHEIVRNNQNV------SNPTKN-EEAFLAKAKQKTLELLQEAIKL---K 815 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANS 372 VE V+++++ L G++ +K+ P E+ +L ++++A S Sbjct: 816 PGDVEYRVLLAQVHLRSGNLKDGTHVLKTILKLKPDHEVATILLNRVKEAES 867 >gi|302657677|ref|XP_003020555.1| hypothetical protein TRV_05342 [Trichophyton verrucosum HKI 0517] gi|291184400|gb|EFE39937.1| hypothetical protein TRV_05342 [Trichophyton verrucosum HKI 0517] Length = 824 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 15/201 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + ++ A + Q+ + + E + + AQ A+ +P Sbjct: 611 LQSDHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYS 668 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + Y + + F Q + A N +L+ + L + ++ A+ Sbjct: 669 AWYGLGKVYERMGK----LRFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQY 724 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLS 304 + L +S++A + A++L+ N+ A +L+ + P H + +Y + Sbjct: 725 SRASSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQD 784 Query: 305 ENTVGKLKRALRLEEINKESV 325 + +K ++ ++ Sbjct: 785 KGNA--IKHFTTALNLDPKAA 803 >gi|6807810|emb|CAB70695.1| hypothetical protein [Homo sapiens] Length = 540 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 178 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 235 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 236 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 295 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 296 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 355 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 356 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 413 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 414 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 471 Query: 391 D 391 D Sbjct: 472 D 472 >gi|163783489|ref|ZP_02178480.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1] gi|159881253|gb|EDP74766.1| hypothetical protein HG1285_08749 [Hydrogenivirga sp. 128-5-R1-1] Length = 850 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 80/261 (30%), Gaps = 66/261 (25%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 +I+ N LARK + S + + L E +Y A + +L + Sbjct: 475 AISIGNGALARKFLTEESGEEIY--------LMGMSFFIEGKYREAIAYFKRLLDRGEFK 526 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ + +G+ A+ + L PD+ +A + Sbjct: 527 SKALLRIADSYYNLGNYERAKELYKEILTFYPDSTEAFDATL------------------ 568 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCDNSIMASICA---AKS 269 +L + + + S M + A Sbjct: 569 -------------------ALAQIELQKPTKDLEKLVRDFERKFPGSPMITDLKYQLANL 609 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 I + ++ +A ILE LL++ T + K ++L EI ++ Sbjct: 610 YIKEGRRSEARRILE----------------ELLTKETY-RAKALIKLAEIEEDPRRKEE 652 Query: 330 IVSKIALEMGSIDQAHAKAML 350 ++ + ++ D+ A A+L Sbjct: 653 LLKEALMKGSGEDKERATALL 673 >gi|169172639|ref|XP_001713896.1| PREDICTED: pre-mRNA-processing factor 6-like [Homo sapiens] Length = 406 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 44 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 101 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 102 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQD 161 Query: 229 LIARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + K M + + LK C +S + ++ Sbjct: 162 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 221 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 222 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 279 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 280 SE-AIFLEARPQRRTKSVDALKKCEHDPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDS 337 Query: 391 D 391 D Sbjct: 338 D 338 >gi|72382930|ref|YP_292285.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A] gi|72002780|gb|AAZ58582.1| TPR repeat [Prochlorococcus marinus str. NATL2A] Length = 612 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 11/197 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G L ++ Y KA++++P+ + A ++ + + + Sbjct: 137 KDLGKLKESETYTRKAIELNPNYAEAHSILGLILRDLGNLQEAESYTRKAIEIKPNY--- 193 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L D G + + +++++ N A L K ++AE+ Sbjct: 194 -AEACSNLGLILKDSGQLQEAELSCRKAIEINPNFADAYSNLGGILSDLGKLKEAELSAR 252 Query: 285 KIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEE----INKESVESLVIVSKIALEMG 339 K + P A ++L +G L+ A I E+L + + +++ Sbjct: 253 KAIAIK--PNYAEACSNLGIILKDLGNLQEAESYTRKAIEIKPNFAEALYSLGSLLIDLD 310 Query: 340 SIDQAHAKAMLAMKIAP 356 ++A + A+++ P Sbjct: 311 KREEAMKSLLKAVELKP 327 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 4/132 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G L A+ KA++I+P+ + + A + + Sbjct: 205 KDSGQLQEAELSCRKAIEINPNFADAYSNLGGILSDLGKLKEAELSARKAIAIKPNY--- 261 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + D G++ + +++++ N A LI +K+ +A L Sbjct: 262 -AEACSNLGIILKDLGNLQEAESYTRKAIEIKPNFAEALYSLGSLLIDLDKREEAMKSLL 320 Query: 285 KIWKVNPHPEIA 296 K ++ P + A Sbjct: 321 KAVELKPALDKA 332 >gi|325916195|ref|ZP_08178479.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas vesicatoria ATCC 35937] gi|325537615|gb|EGD09327.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas vesicatoria ATCC 35937] Length = 421 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 104/354 (29%), Gaps = 17/354 (4%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G YR + + IL L LL+ Sbjct: 7 VLILLVAVALGVLGAQWLSHQSSYDLGNVVVSVGGNDYRAAMPQAVLILIIALLVVWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVTASEDDEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L V++A A A + + + T + + + A A Sbjct: 120 ALAS--AVRVADARGDEAAATALAQQLAERDPTAHALLQGERHLARQR--PVEAIN-ALD 174 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + P A L ++ A + L + + + Sbjct: 175 AANAQPLPARGLLLRTHALTQIGRADEAYGQLGALRQQAVLAPEAYSALEATLAEQTLLQ 234 Query: 240 GDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + E+L + A + A A+ + A LE+ + + Sbjct: 235 AGDANALAERWEALPKPLRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQWDESLVRL 294 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y L E + A R +S L+ ++++A QA A+ Sbjct: 295 YGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRAL 348 >gi|307321312|ref|ZP_07600712.1| FecR protein [Sinorhizobium meliloti AK83] gi|306893040|gb|EFN23826.1| FecR protein [Sinorhizobium meliloti AK83] Length = 1197 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 49/162 (30%), Gaps = 7/162 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 DL A +AL +P + + ++ + A K A + Sbjct: 421 DNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAA----EAAFKQAIALDPLDP 476 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +++ D+ M + + +L + + +A + + + + A L Sbjct: 477 VAHANLAIQYMDEMRMAEAKREIDAALSVDPSFDVALVARGRYHMQNGEADNAVEDLLAG 536 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESV 325 NP A + ++ A L + ++ Sbjct: 537 STANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPNDP 578 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 70/193 (36%), Gaps = 8/193 (4%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRA 226 D + + +AL I P+ P EA + + A+ L + K A + Sbjct: 387 DDRDELRDGVERALSIDPEDPTALEARAHYRYHIDNDLEGALADLERALKTAPGSSS--- 443 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + L +GD A+ +++ L +A A + + + +A+ ++ Sbjct: 444 -IWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVAHANLAIQYMDEMRMAEAKREIDAA 502 Query: 287 WKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 V+P ++A + H+ + ++ L N + ++++ E G Sbjct: 503 LSVDPSFDVALVARGRYHMQNGEADNAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIP 562 Query: 344 AHAKAMLAMKIAP 356 A A ++ P Sbjct: 563 AAQALDNADRLDP 575 >gi|302509350|ref|XP_003016635.1| hypothetical protein ARB_04926 [Arthroderma benhamiae CBS 112371] gi|291180205|gb|EFE35990.1| hypothetical protein ARB_04926 [Arthroderma benhamiae CBS 112371] Length = 805 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 71/201 (35%), Gaps = 15/201 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + ++ A + Q+ + + E + + AQ A+ +P Sbjct: 592 LQSDHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYS 649 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + Y + + F Q + A N +L+ + L + ++ A+ Sbjct: 650 AWYGLGKVYERMGK----LRFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQY 705 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLS 304 + L +S++A + A++L+ N+ A +L+ + P H + +Y + Sbjct: 706 SRASSLSPHSVLARLRKARTLLKLNEVNLAHVELKVLKDVAPDEPNVHYLLGKLYKMIQD 765 Query: 305 ENTVGKLKRALRLEEINKESV 325 + +K ++ ++ Sbjct: 766 KGNA--IKHFTTALNLDPKAA 784 >gi|116749962|ref|YP_846649.1| TPR repeat-containing serine/threonin protein kinase [Syntrophobacter fumaroxidans MPOB] gi|116699026|gb|ABK18214.1| serine/threonine protein kinase with TPR repeats [Syntrophobacter fumaroxidans MPOB] Length = 747 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 6/140 (4%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E L L+E Q + A + LE L++ R + ++ D ++A +Y Sbjct: 482 EPL--LVEAQN-QSASNPAEAQKLLEEALRLDPNRFETILTMARLQASRKDYSAAVQYYR 538 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A+ ++ +AP + +++ AI LL + + Sbjct: 539 DAVRVNGNAPEAYSEMGALQQAQGDYASAIRSYEAGLALRPSHPDE---LLANVAFCHDK 595 Query: 239 KGDMIASYHDAIESLKLCDN 258 + + ++L++ N Sbjct: 596 LNNPDQARRYYEQALEINPN 615 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 14/138 (10%) Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN--- 290 +N + + E+L+L N + A+ S+ A +VN Sbjct: 488 AQNQSASNPAEAQKLLEEALRLDPNRFETILTMARLQASRKDYSAAVQYYRDAVRVNGNA 547 Query: 291 PHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQA 344 P Y+ + + ++ + + L+ V+ ++ + DQA Sbjct: 548 P-----EAYSEMGALQQAQGDYASAIRSYEAGLALRPSHPDELLANVAFCHDKLNNPDQA 602 Query: 345 HAKAMLAMKIAPRKEIFL 362 A++I P L Sbjct: 603 RRYYEQALEINPNNRAAL 620 >gi|257487463|ref|ZP_05641504.1| hypothetical protein PsyrptA_29588 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008946|gb|EGH89002.1| hypothetical protein PSYTB_04455 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 656 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL+ R GD + D ++ L ++ A + + +A L Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333 +K P E+ Y + + + + KR R + ++ S + Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 A + + P +++F Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390 >gi|227356456|ref|ZP_03840844.1| cellulose synthase protein [Proteus mirabilis ATCC 29906] gi|227163566|gb|EEI48487.1| cellulose synthase protein [Proteus mirabilis ATCC 29906] Length = 1090 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 59/380 (15%), Positives = 114/380 (30%), Gaps = 59/380 (15%) Query: 55 WILLFAVSRFFLSCPAMLF-HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 W LL L+ + + YK + +I LA+ + Sbjct: 277 WHLLAKADEALLNQEYSVAKRYFTQVRQLSPYK--SEAYI--GLGDIELAQHQLEQAERY 332 Query: 114 --HTFHNEY--------LVYLLEVQIALAERQYNI--AHEKLEMMLQIPATREFAVYSLY 161 + L L Q Q+ ++ + + Q Y Sbjct: 333 YQQALQYQPNDAATLHSLTKLYRQQSHQKAAQFMANLTSQQYKNLAQD--------YGYI 384 Query: 162 FESCRIG---DLNSAQRY-----ATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + D Q Y KA+ + PD W + ++ ++ A + N Sbjct: 385 ISGIQQDLAADDEQQQHYLSAIEKRKAIAKAYPDEVWNIYRLADDLLITQQPQLAEDYFN 444 Query: 213 Q-KKKNAKEWNRNRAILL----IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA- 266 Q ++ + +R A L R+ + + I + L I A Sbjct: 445 QLNQRRPNDPSRRYAYALYLNKTGRAQQALNTLKTIPLSQRSESMNALDSQLRFGQIMAH 504 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEE 319 A+SL N++++A L + P PE + + + L + Sbjct: 505 AQSLREHNQQQQAVEYL---FTHIP-PEQKIESYLLLAQWAE-EDDQLNQALNYYHTVLN 559 Query: 320 INKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQANSHNT 375 + + E+ ++ + +I+L IDQA +++P K LA E+ + Sbjct: 560 LAPNN-ETALLGATEISLAQHQIDQARYYLAQIEQLSPEKFNHYSLRRLANAEKTAGNID 618 Query: 376 DKILY--WTQSALHAMPDPL 393 Y + + PD Sbjct: 619 KAKHYFIYLARQVDKEPDSA 638 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 81/290 (27%), Gaps = 43/290 (14%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALA 132 L L LA K + + + +LL + AL Sbjct: 237 RYSRANQRAPAIYYLSQAL--------TLAPKHNDSDLWRTLLQSNQYWHLLAKADEALL 288 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 ++Y++A + Q+ + A L L A+RY +AL P+ Sbjct: 289 NQEYSVAKRYFTQVRQLSPYKSEAYIGLGDIELAQHQLEQAERYYQQALQYQPNDAATLH 348 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ + Y A N + K ++ ++ + A + Y AIE Sbjct: 349 SLTKLYRQQSHQKAAQFMANLTSQQYKNLAQDYGYIISGIQQDLAADDEQQQHYLSAIEK 408 Query: 253 LKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 K AK+ + N R A+ +L P++A Y Sbjct: 409 RKA----------IAKAYPDEVWNIYRLADDLLIT-----QQPQLAEDY----------- 442 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 +L + + L + +A I + Sbjct: 443 ---FNQLNQRRPNDPSRRYAYA---LYLNKTGRAQQALNTLKTIPLSQRS 486 >gi|148222496|ref|NP_001087374.1| PRP6 pre-mRNA processing factor 6 homolog [Xenopus laevis] gi|50927247|gb|AAH79686.1| MGC80263 protein [Xenopus laevis] Length = 948 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 99/301 (32%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 586 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 643 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 644 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIEAAQD 703 Query: 229 LIARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + + + + LK C +S + ++ Sbjct: 704 LCEEALRHYEDFPKLWMMKGQIEEQMEQTEKARDAYNQGLKKCIHSTSLWLLLSRLEEKV 763 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP PE+ L E G A L +E S ++ Sbjct: 764 GQLTRARAILEKSRLKNPKTPELWLESVRL--EFRAGLKNIANTLMAKALQECPNSGILW 821 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 822 AE-AVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 879 Query: 391 D 391 D Sbjct: 880 D 880 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 295 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 351 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 352 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DLRAKKRVLRKA 403 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E +VE + ++++ + + A Sbjct: 404 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTNVELWLALARL----ETYENA 456 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 457 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 502 >gi|148252196|ref|YP_001236781.1| hypothetical protein BBta_0602 [Bradyrhizobium sp. BTAi1] gi|146404369|gb|ABQ32875.1| hypothetical protein BBta_0602 [Bradyrhizobium sp. BTAi1] Length = 817 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 7/173 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + A+ AL +SP + Y + L + Sbjct: 640 LQRDRPQEAEAEYRAALRLSPHYATAAINLADLYRQRGQDGEGEAVLRTALVASP----R 695 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + L + + + +L +L S ++ A +L+ Sbjct: 696 DAALFYSLGLTLTRLRRPDDALNALARAAELEPERQRYVYVYGIALHSSGRREAAVSVLK 755 Query: 285 KIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + +P+ A I +S + L+ A +L I E ++ ++ Sbjct: 756 DALRAHPNDSQILQALISFSRMSGDATSALRYAEQLAAIAPSDKELAALIQEL 808 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 18/202 (8%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + A +++ E R A + + + +L+L + Sbjct: 606 ADRARFDLAAAEFIAAQRSNAERPEAR----TALGNFLLQRDRPQEAEAEYRAALRLSPH 661 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-------LSENTVGKL 311 A+I A + + + E +L +P + A Y+ ++ + L Sbjct: 662 YATAAINLADLYRQRGQDGEGEAVLRTALVASP-RDAALFYSLGLTLTRLRRPDDALNAL 720 Query: 312 KRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 RA LE + V V IAL G + A + A++ P +I L + Sbjct: 721 ARAAELEPERQRY----VYVYGIALHSSGRREAAVSVLKDALRAHPNDSQILQALISFSR 776 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 + T + Y Q A A D Sbjct: 777 MSGDATSALRYAEQLAAIAPSD 798 >gi|289627881|ref|ZP_06460835.1| hypothetical protein PsyrpaN_22556 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648310|ref|ZP_06479653.1| hypothetical protein Psyrpa2_11259 [Pseudomonas syringae pv. aesculi str. 2250] gi|330868419|gb|EGH03128.1| hypothetical protein PSYAE_14460 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 656 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL+ R GD + D ++ L ++ A + + +A L Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333 +K P E+ Y + + + + KR R + ++ S + Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 A + + P +++F Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 70/245 (28%), Gaps = 36/245 (14%) Query: 71 MLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 L +G ++A + A + Y L+ IA Sbjct: 167 ALTRRRQAIQEQAAVDKAASGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIA 226 Query: 131 LAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QY A + AT + R+GD + A++ +AL + + Sbjct: 227 Q--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQALAVG-NL 280 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SLENADK 239 P +A + Y + S A+ L + + + A L +L+ + Sbjct: 281 PLREQASL--YAAMGQPSEALQRLQKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKR 338 Query: 240 GD------MIASYHDAIESLKLCDNSIMASIC--------AAKSLISQN---KKRKAEVI 282 D A +++ D++ + A + R+A Sbjct: 339 VDRSSGLKPREVQDAAYSAMRTPDDAQAIAYFKRVLDYQKAGDLQMPAQQVFDTRRAVSD 398 Query: 283 LEKIW 287 L + W Sbjct: 399 LSREW 403 >gi|330988366|gb|EGH86469.1| hypothetical protein PLA107_25305 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 656 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL+ R GD + D ++ L ++ A + + +A L Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333 +K P E+ Y + + + + KR R + ++ S + Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 A + + P +++F Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390 >gi|323453736|gb|EGB09607.1| hypothetical protein AURANDRAFT_63300 [Aureococcus anophagefferens] Length = 1652 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 52/374 (13%), Positives = 107/374 (28%), Gaps = 68/374 (18%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 + L+ R + + + A + + L Sbjct: 530 RRMSRSLYVRGERR-----------LGSGRYEDAADLFRECVALTPKDSYAWRALATALA 578 Query: 130 ALAERQYNIAHEKLE---------------MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 A + + A + + R A LY + + ++ Sbjct: 579 ADPGGRASDARDAFARGAAHCGSVHLVHAWASFEAAEQRHDAARGLYERALALDPASAYV 638 Query: 175 RYA------------TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AK 219 R+A KAL + DA A++ + + L A+ Sbjct: 639 RHAWGVLERDVFHDDAKALALFEDASAAKSALLDVAAAETRYGGDVRRLRAHLLELLGAR 698 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRK 278 R+ A++ A + + +A+ A+E+ S A++ A++ R+ Sbjct: 699 SPRRDDAVVYRAFARCAMSGDERVAALQRALEA---EPRSGAAAVELAEAYEDDLGDARR 755 Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR--ALRLEEINKESVES---- 327 A L P + + + +L+R L++ + + Sbjct: 756 ARAFLRSFLDGGPRNGTKARDPRGASQRRCAAKALARLERDAFGNLDQAARWYARALRED 815 Query: 328 ----------LVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376 + ++ A+E G A A K P R ++ LA+++ A + D Sbjct: 816 SASGKPDCGVAIAAAECAVERGHHALARELLGRAAKAHPKRASPWIALAKLDVA-RGDRD 874 Query: 377 KILYWTQSALHAMP 390 AL A P Sbjct: 875 AAERCFGVALKAEP 888 Score = 37.6 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 55/202 (27%), Gaps = 9/202 (4%) Query: 63 RFFLSCPAMLFHMLHKR---NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 F P R KAL L A N+ A + ++ ++ + + Sbjct: 762 SFLDGGPRNGTKARDPRGASQRRCAAKALAR-LERDAFGNLDQAARWYARALREDSASGK 820 Query: 120 Y--LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 V + + A+ + +A E L + R +L GD ++A+R Sbjct: 821 PDCGVAIAAAECAVERGHHALARELLGRAAKAHPKRASPWIALAKLDVARGDRDAAERCF 880 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 AL P + A+ + W A K A + Sbjct: 881 GVALKAEPTHGAASLAL--GKCRHEVWRDAEGA-KDAYKGGLATLHRDRETSRAYAQWAP 937 Query: 238 DKGDMIASYHDAIESLKLCDNS 259 A A ++ Sbjct: 938 ALWHAWAQVELAQDAHGRAATL 959 >gi|20090818|ref|NP_616893.1| hypothetical protein MA1970 [Methanosarcina acetivorans C2A] gi|19915884|gb|AAM05373.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 389 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 8/146 (5%) Query: 134 RQYNIAHEKLEM-MLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 ++ A E E +L+ P E A + A AL I PD Sbjct: 245 GRFEEALETYEKVLLRNPKYAEAWAGKGSVLSALDRK--EEALEAYLSALKIRPDYLEAL 302 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++V + + A+ + + A E L R L ++ + Sbjct: 303 KSVGSLFSRLGRYEEALAAYDTALQAAPEAPE----LWAGRGLVLSELDRQEEALQSCSR 358 Query: 252 SLKLCDNSIMASICAAKSLISQNKKR 277 +L+L A K L +++ Sbjct: 359 ALELKPGFAPALEVKVKILSEIGRQK 384 >gi|326430118|gb|EGD75688.1| hypothetical protein PTSG_12640 [Salpingoeca sp. ATCC 50818] Length = 1330 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 115/335 (34%), Gaps = 48/335 (14%) Query: 92 LMS---IAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 LM+ +A N A + + + +S + L ++L+ +I LAE + A + ++ + Sbjct: 544 LMAEIQLAMGNYGTALQALQNGLSYNFEIRDLPLYHVLQARIHLAEDKTTDALKSMQAAM 603 Query: 148 QIPATR------------------------EFAVYSLYFESCRIGDLNSAQRYATKALDI 183 +IP R + ++ + R+ D A Sbjct: 604 KIPGVRKVVQNTKTSRPVKRSAPVTDRVTVFLTLADVHIAANRLNDAAKVLTEAENQFRD 663 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + +A VT A + + + A+ L + + + + + DK Sbjct: 664 TAEAVRVTLAQSELALKRGDVEGALDLLRGVGREEPYYIQAKEKMAHIYLHHRKDKRVYA 723 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IAN--IY 299 A Y + +E + + + ++ + KA + E K NP + +A+ Sbjct: 724 ACYKELVEQNPTSHSY----LLLGDAYMAIQEPDKAINVYETALKQNP-RDGTLASKIGA 778 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--- 356 + + + +K N E ++++ L++ + D+A A+ + Sbjct: 779 ALVRTHDFNRAIKYYEA-AVKNGEQPHLRSALAELHLKLKNFDKAKRVLEDALASSNQDT 837 Query: 357 ------RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + + +LA++ S + + Q A Sbjct: 838 IEGMVQTVKDYEMLARV-HKQSTDISAAIDTLQRA 871 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 33/230 (14%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GDL +AQ A L ++ + + + + A+ L E R+ Sbjct: 518 SGDLVAAQSGAQHCLKMNTGFTEAHLLMAEIQLAMGNYGTALQALQNGLSYNFEI-RDLP 576 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKL-------------------CD--NSIMASIC 265 + + ++ + + + ++K+ + + + Sbjct: 577 LYHVLQARIHLAEDKTTDALKSMQAAMKIPGVRKVVQNTKTSRPVKRSAPVTDRVTVFLT 636 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRL 317 A I+ N+ A +L + N + +A L + G L + Sbjct: 637 LADVHIAANRLNDAAKVLTEA--ENQFRDTAEAVRVTLAQSELALKRGDVEGALDLLRGV 694 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKA-MLAMKIAPRKEIFLLLAQ 366 +++ ++ I L + +A ++ P +LLL Sbjct: 695 GREEPYYIQAKEKMAHIYLHHRKDKRVYAACYKELVEQNPTSHSYLLLGD 744 >gi|308188821|ref|YP_003932952.1| Cellulose synthase operon protein C [Pantoea vagans C9-1] gi|308059331|gb|ADO11503.1| Cellulose synthase operon protein C [Pantoea vagans C9-1] Length = 1157 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 85/268 (31%), Gaps = 21/268 (7%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 ALA+ + A ++ +A+ L + + +A+++ +A + Sbjct: 369 ALAQHDIDAAETHYRAAQTYDSSDSYALIGLGDVAMARKETAAAEQFWQRARRLDGTNIT 428 Query: 190 VTEAVVQQY--VLAKEWSRAITFLNQKKKN--AKEWNRNRAILLIARSLENADKGDMIAS 245 + Y V I L ++ A R+ L A + A + + Sbjct: 429 AVRRLAGLYQTVSPAREMEFINTLPAAQQRALADTIRTLRSDSLRAEADALAQQARWSQA 488 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-- 303 ++ +L + + S A +L + ++A+ ++ + + +P A T L Sbjct: 489 VEKYRQARELSPDDVWLSYRLAGALRNSGAGQQADAVMRALPQQHPQDATALYATALWFS 548 Query: 304 -SENTVGKLKRALRL--EEINKESVESL--------VIVSKIALEMGSIDQAHAKAMLAM 352 ++N + RL + + + E ++ G A+ + Sbjct: 549 GNDNNSEAMATLHRLPDAQWSSDMRELADRLKQDQIFAQAEALRAAGQE----QAAVTLL 604 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILY 380 + P L+ + + L Sbjct: 605 EQQPVSTRRDLMLADWALERGDAQQALA 632 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 101/314 (32%), Gaps = 51/314 (16%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++A H+I A + + + L+ L +A+A ++ A + + Sbjct: 360 WLAIEQGDKALAQHDIDAAETHYRAAQTYDSSDSYALIGL--GDVAMARKETAAAEQFWQ 417 Query: 145 MMLQIPATREFAVY---SLY------FESCRIGDLNSAQRYA--------------TKAL 181 ++ T AV LY E I L +AQ+ A +A Sbjct: 418 RARRLDGTNITAVRRLAGLYQTVSPAREMEFINTLPAAQQRALADTIRTLRSDSLRAEAD 477 Query: 182 DISPDAPWVTEAVVQQYVLAKE----W-----------SRAITFLNQKKKNAKEWNRNRA 226 ++ A W + W S A + + + + A Sbjct: 478 ALAQQARWSQAVEKYRQARELSPDDVWLSYRLAGALRNSGAGQQADAVMRALPQQHPQDA 537 Query: 227 ILLIARSL---------ENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKK 276 L A +L E + + + +L D I A A++L + ++ Sbjct: 538 TALYATALWFSGNDNNSEAMATLHRLPDAQWSSDMRELADRLKQDQIFAQAEALRAAGQE 597 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + A +LE+ V+ ++ L + L ++ ++ ++ + + + Sbjct: 598 QAAVTLLEQQ-PVSTRRDLMLADWALERGDAQQALAGYQQVLSRQPDNGDAALGRIEALV 656 Query: 337 EMGSIDQAHAKAML 350 + +A Sbjct: 657 ALQRNSEARQALAQ 670 >gi|88706362|ref|ZP_01104067.1| TPR domain protein [Congregibacter litoralis KT71] gi|88699298|gb|EAQ96412.1| TPR domain protein [Congregibacter litoralis KT71] Length = 576 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 13/196 (6%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GDL A A+ SP P A ++ A L Q A Sbjct: 18 SGDLVGADGSFRAAIAASPGQPQAMLAYATFLRNQGRFAEAQDQLQQALAGAPNSPEVWQ 77 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + + + + ++ +L + AA Q +A + + Sbjct: 78 AL----ARLHYQQESWQEAQRCITKATELAPQAPPLWELAAAIAQKQGDVAQALALCRQG 133 Query: 287 WKVNP-----HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 NP H +A + L E + V + ++ + + ++ L+ G Sbjct: 134 IGHNPKASRLHYSLAQL---LRQECDFVEAAAAYEQALKLGFDQPDLYRNRAEALLDAGD 190 Query: 341 IDQAHAKAMLAMKIAP 356 I+ A A A ++ P Sbjct: 191 IEAALACANTGVERFP 206 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 79/261 (30%), Gaps = 34/261 (13%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ----------- 213 G AQ +AL +P++P V +A+ + + + W A + + Sbjct: 50 RNQGRFAEAQDQLQQALAGAPNSPEVWQALARLHYQQESWQEAQRCITKATELAPQAPPL 109 Query: 214 -------KKKNAKEW------------NRNRAILLIARSLENADKGDMIASYHDAIESLK 254 +K N + L + + + D + + ++LK Sbjct: 110 WELAAAIAQKQGDVAQALALCRQGIGHNPKASRLHYSLAQLLRQECDFVEAAAAYEQALK 169 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK--L 311 L + A++L+ A + P HP + L + + L Sbjct: 170 LGFDQPDLYRNRAEALLDAGDIEAALACANTGVERFPGHPLLQRTAAQLSFSSGAQRDHL 229 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQA 370 ++ + + + ++ +G + A ++ P +L ++ A Sbjct: 230 EKLRAAVKREPRNPALWQTLVQLMKRLGEESRVEETLRDAQRLGCPETPSLQVLGALDMA 289 Query: 371 NSHNTDKILYWTQSALHAMPD 391 + L + A PD Sbjct: 290 QRGEKSEALNRLEQISLANPD 310 >gi|330887779|gb|EGH20440.1| hypothetical protein PSYMO_02654 [Pseudomonas syringae pv. mori str. 301020] Length = 656 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 17/208 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL+ R GD + D ++ L ++ A + + +A L Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAAMGQPSEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333 +K P E+ Y + + + + KR R + ++ S + Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALDEFKRVDRSSGLKPREVQDAAYSAMRTPD 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 A + + P +++F Sbjct: 363 DAQAIAYFKRVLDYQKAGDLQMPAQQVF 390 >gi|320353060|ref|YP_004194399.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121562|gb|ADW17108.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus propionicus DSM 2032] Length = 711 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 8/170 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + A + A + H + L+ L + A A + + ++ Sbjct: 535 GELHFMAGKVDAAADYYRQAVNVH--KDPGLLIKLGLH-AEQTGNNEDAAKYYQEVIDTF 591 Query: 151 ATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T L + + G +L++A R A KA ++ P + + + + K++ A + Sbjct: 592 PTFFVGYNQLAWLYAKRGVELDTAMRLAQKADELQPGNASILDTIGWIHFQKKKFDAAAS 651 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 L + ++ N +L +G A+ +L+L Sbjct: 652 HLEKALESNP----NNPTILYHLGRTLLAQGKSDAAMGHLRRALELSPKF 697 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 15/163 (9%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 Y + +++ A Y L +G A + K+L++ P Sbjct: 223 LTGDYERSIASFSKAIELNRNAYAAHYGLGVVYETLGKNKEAMQALQKSLELRPGNASAL 282 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 E + + + A+ N+ + A +L+ +L A K D AI Sbjct: 283 ETLGKLQLKEGLIEAALQTGNEMASKNMDG----AFVLLGDALLQAGKTDE------AIA 332 Query: 252 SLKLCDN---SIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 SLK + + Q + AE ++E + K++P Sbjct: 333 SLKKAPQGGAEVP--YLLGYCEMVQGRYEAAERLMEDVLKIDP 373 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 67/202 (33%), Gaps = 11/202 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G+++SA +A + + + P V + + A LN K+ Sbjct: 81 LMKQEFARGNIDSAGYFAEQLVPLRPQEADVHAIYSISLAATGKNAEAREQLNAAKRLGP 140 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + L A ++ + + + +++ L + KA Sbjct: 141 D----TLFTLAAEAIILQREKNYTEAIKKCEQAIALNATHPYPRNILGRVYADMGHHAKA 196 Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +K ++ + Y +L L+ + + + E+N+ + + + + Sbjct: 197 LDCFQKAVELKV--DFLLGYINLGAVSYLTGDYERSIASFSKAIELNRNAYAAHYGLGVV 254 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 +G +A ++++ P Sbjct: 255 YETLGKNKEAMQALQKSLELRP 276 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 65/196 (33%), Gaps = 9/196 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + D A ++ T A+ +P A+ + + +A + A + Q K+ Sbjct: 505 LQKKDRAQAMQFFTSAVQEAPKFFAALYALGELHFMAGKVDAAADYYRQAVNVHKDPG-- 562 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVIL 283 LLI L G+ + E + + A + + A + Sbjct: 563 ---LLIKLGLHAEQTGNNEDAAKYYQEVIDTFPTFFVGYNQLAWLYAKRGVELDTAMRLA 619 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K ++ P + I + + H + + E N + L + + L G Sbjct: 620 QKADELQPGNASILDTIGWIHFQKKKFDAAASHLEKALESNPNNPTILYHLGRTLLAQGK 679 Query: 341 IDQAHAKAMLAMKIAP 356 D A A++++P Sbjct: 680 SDAAMGHLRRALELSP 695 >gi|283779986|ref|YP_003370741.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] gi|283438439|gb|ADB16881.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] Length = 556 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 124/322 (38%), Gaps = 24/322 (7%) Query: 87 ALYTGL---MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV--QIALAERQYNIAHE 141 AL TG+ + L + +S + E ++ L E + L + Q A E Sbjct: 24 ALATGIPHAFAAGEGQAELDQATELQLSAETLADLEKIITLTESALKKGLDDGQAGFAKE 83 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALDISPDAPWVTEAVVQQ 197 L A R A +++ ++ ++YA KAL +P P + + Sbjct: 84 MLAATAYQHAERLAA--AIFEQTPPSPKWPLIRQYALRDLEKALANNPKLPDAHVLLAKL 141 Query: 198 YVL-AKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 VL + A+ L++ K ++ R + +L+ R+ + D+ +A A+++ Sbjct: 142 NVLPGGDTKIAMDSLDEAIKLLKKEDNVRELSKILVLRAALSEDEEKKLADLSAAVDA-- 199 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHP--EIANIYTHLLSENTVG 309 ++ A A + + + KA L+K+ + N P ++ +T+L + Sbjct: 200 -DPENVEAWQGRALIYLEKGENDKAVEDLKKLVEKNGDNPTAIAALSEAFTNLKKYDEA- 257 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 L +A +L E+ + + S+I + + A A++I+P LLL Sbjct: 258 -LAQANKLIEVAPKLSLGYTLRSRIYVLKDDLKSALKDLDEALEISPDDLGALLLRSRLH 316 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 A N + AL PD Sbjct: 317 AAEGNDAAAKADVEKALAVRPD 338 Score = 43.4 bits (101), Expect = 0.088, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 85/244 (34%), Gaps = 18/244 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNE----YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + +A M S E L +L ++ AL+E + + + P Sbjct: 147 GDTKIA--MDSLDEAIKLLKKEDNVRELSKILVLRAALSEDEEKKLADLSAAVDADPENV 204 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 E G+ + A K ++ + D P A+ + + K++ A+ N+ Sbjct: 205 EA-WQGRALIYLEKGENDKAVEDLKKLVEKNGDNPTAIAALSEAFTNLKKYDEALAQANK 263 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + A ++ RS K D+ ++ D E+L++ + + A + ++ ++ Sbjct: 264 LIEVAP----KLSLGYTLRSRIYVLKDDLKSALKDLDEALEISPDDLGALLLRSRLHAAE 319 Query: 274 NKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESL 328 A+ +EK V P++ + L + + ++ E Sbjct: 320 GNDAAAKADVEKALAVR--PDLPQAIMLRSLLAAQKGKIAEAVADLQLLLQADPQNAEYR 377 Query: 329 VIVS 332 + ++ Sbjct: 378 LQLA 381 >gi|300897293|ref|ZP_07115729.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] gi|300358941|gb|EFJ74811.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] Length = 744 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 171 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 230 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + + V + + A NQ + Sbjct: 231 TEVDIAAGDKAAARSQLAKLPATNNASLNTQRRVALAQAQLGDTAAAQQTFNQLIPLAKS 290 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 291 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 325 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 36/273 (13%), Positives = 82/273 (30%), Gaps = 36/273 (13%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALD 182 E IA + + +E LQ L ++ G A + L Sbjct: 25 EAFIASLSASQRRSIDDIERSLQNDR--------LAQQAEALENQGKWTQAAALQRQRLA 76 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P + W+T + Q A + S+A L + K + + + Sbjct: 77 LDPGSVWITYRLSQDLWQAGQRSQA-DTLMRNLAQQKPNDPEQVYAYGLYLSGHGQDRAA 135 Query: 243 IASYHDAIES----------LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +A + + +L + + + A L K+ +AE +L + P Sbjct: 136 LAHINSLPRAQWSSNIQELVNRLQSDQV---LETANRLRESGKEAEAEAML----RQQP- 187 Query: 293 P----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P ++ + + T + L + ++++ ++++ + G A ++ Sbjct: 188 PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAILGLTEVDIAAGDKAAARSQ 246 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + QA +T Sbjct: 247 LAKLPATNNASLNTQRRVALAQAQLGDTAAAQQ 279 >gi|254498044|ref|ZP_05110805.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254352744|gb|EET11518.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 389 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/204 (9%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 93 MSIAA-----HNIPLARKMHSYVSQQ----HTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 +++ + + A ++H + + E L+ L Q ++ ++ A Sbjct: 73 LALGSLFRRRGEVDRAIRIHQNLIARPQLSILQRKESLMAL--GQDYMSAGVFDRAERIF 130 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +++ G ++ ++ Y K Sbjct: 131 LEVVE------LG-----------GSKETS----------------SLHGLLAIYQQEKA 157 Query: 204 WSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 W +A+ + + + ++ A + + ++ + + +++ + S+ A Sbjct: 158 WEKALDVIKKLEITTGTSFHTQAAHYYCEMATQALKANNVDKAAYCIKQAINVDAESVRA 217 Query: 263 SICAAKSLISQNKKRKAEVILEKI 286 S+ A + + + ++A L+++ Sbjct: 218 SLMHASIEMKEGRYKQAIRSLKRV 241 >gi|114051830|ref|NP_001040185.1| DnaJ (Hsp40) homolog 9 [Bombyx mori] gi|87248313|gb|ABD36209.1| DnaJ-like protein isoform A [Bombyx mori] gi|253721959|gb|ACT34043.1| DnaJ-9 [Bombyx mori] gi|257122608|gb|ACV41273.1| DNAJ9 [Bombyx mori] Length = 515 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 16/181 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L + + + A E +L++ T V L + A ++ + Sbjct: 196 KLTKAECLALLGRCQEAQEIANDLLRLDSQDTEAIYVRGLCLYFEDRDEQ--AFKHFQQV 253 Query: 181 LDISPDAPWVTEA-----VVQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD E +++Q W +A+ N+ K A L Sbjct: 254 LRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTVNAKL 313 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++ A + + +L+L +N + A + AK + +A E+++K Sbjct: 314 HFNKATVCAKLNMLNETAEACTAALELDENYVKALLRRAKCYTELGEYEEAVKDYERLYK 373 Query: 289 V 289 + Sbjct: 374 I 374 >gi|260430855|ref|ZP_05784827.1| transcriptional regulator domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260418296|gb|EEX11554.1| transcriptional regulator domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 452 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 20/226 (8%) Query: 157 VYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAV---VQQYVLAK-----EWSRA 207 + L G +A +A+++ + + ++ + A Sbjct: 206 LRGLPELYRFEGQSYETAMSLFRRAVELDSGYAQAHSYLAWCLNFWIAEGKSSNVDRDSA 265 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + +K E + A+ L R + + + + ++L L N +A + Sbjct: 266 TAVFHARK--GVELDPEDALNLSIRGHILSLLEHRPHEAVDIMDQALSLNPNLPLAWGIS 323 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEI 320 A + A + +W++ P + A + + ++ R Sbjct: 324 ATAHAYLGNGAIAREHMLNVWRLTPFGPLNFFFWTAVGLAEFVDGDYPEAIRALQRARRT 383 Query: 321 NKESVES-LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ + AL+ G I+QA A A ++ P I +A Sbjct: 384 KPRFMAALRLLAASYALD-GQIEQARATAEKLLEKDPGFSISRFMA 428 >gi|291613082|ref|YP_003523239.1| hypothetical protein Slit_0612 [Sideroxydans lithotrophicus ES-1] gi|291583194|gb|ADE10852.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1] Length = 834 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 41/266 (15%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + +Y + M + F +L +G A + +A++++P Sbjct: 157 ALFNQGRYQDVADSARAMTMQFPSHSFGWATLGVVLQHLGRNEEALQPMQRAVELAPKDA 216 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA----------- 237 + A T + K K++ A L + +L + Sbjct: 217 QAHSNLGNTLSYLGRLDEAETSFRRALKINKDF--AEAHLNLGATLHDLGRFGEAEVSYR 274 Query: 238 ---------------------DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +G + + ++L++ + AS +L +Q K Sbjct: 275 CAIQLKPGLAEAHYNLGNTLKSQGKLEEAVASYRKALQIAPGLVGASSNLGAALQAQGKL 334 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRA----LRLEEINKESVESLVIV 331 +AE IL + + N P+ Y++L S + +G+L+ A + I + E L + Sbjct: 335 AEAETILRNVLQSN--PDSLEAYSNLGSTLHDMGRLEEARSEYEKALRIKPDHAEILSNL 392 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + MG ++A A++ P Sbjct: 393 GNTLMTMGLQEEAVRCFRDALEYKPD 418 >gi|206891179|ref|YP_002248164.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743117|gb|ACI22174.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 437 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 42/343 (12%), Positives = 112/343 (32%), Gaps = 44/343 (12%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A++ + ++ H + L+ L +++ E Y A + + ++ ++S+ Sbjct: 103 AKEALQEILKEEPEHIDALIRL--GDLSMKEEDYKTALKYYKKAYELDPKNIVPLFSIEN 160 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ + A +Y + ++ PD+P + ++W I + K E+ Sbjct: 161 VMEKMNENELALKYIEQITNLEPDSPLAHYKMRNILERLEKWEDLIVLQKKILKLVPEYK 220 Query: 223 R----NRAILLIA-RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R + + + G++ + +K + I A + A+ +IS+ Sbjct: 221 KSEEERRLVGYTYEYGRVSLESGEIEQAERIFSNLVKTSSDFIPAYLGLAEVIISKEGVE 280 Query: 278 KAEVILEKIWKVNPHPEI-------ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +A L+K ++ ++ + + ++ L+ + +E + Sbjct: 281 EAIDFLKKCYE-----DLKSKLLLIRLEDLLISIGDPKRLIQFYLKAINEKPDDIELKFL 335 Query: 331 VSKIALEMGSIDQAHAKA---MLAMKIAPR----------KEIFLLLAQIEQANSHNTDK 377 + ++ + ID A A+ P+ + A E K Sbjct: 336 LGRLYYRLEMIDDAIETLSSIDPAICSTPKLHCIKGYLYLRRNQTTKAVSEFKQLCPETK 395 Query: 378 ILYWTQSALHAMPDPLWISDDGY-LSSVWLPLSPISKTLCYFE 419 + ++ + + W + T FE Sbjct: 396 VSNL-----------SYLCRECHSTFEEWTGRCSVCGTWNSFE 427 >gi|83309807|ref|YP_420071.1| O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] gi|82944648|dbj|BAE49512.1| Predicted O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] Length = 758 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 67/222 (30%), Gaps = 21/222 (9%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + R+ A L + A++ L + G L + + AL + P+ Sbjct: 107 ALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQSALALRPNFV 166 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + A+ L + A L G I + Sbjct: 167 EALANMAGVLSRLGRPAEAVEKLRRAVAERP----GEASLQADLGRALLASGHRIEADVA 222 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 +L+L +S + AA + ++ + +A LE + L Sbjct: 223 VCRALRLAPDSPPILVAAADVIRARGRMEEA---LEHAARA----------AELAPNYPP 269 Query: 309 GKLKRALRLEEINKES--VESLVIVS--KIALEMGSIDQAHA 346 L A +L + + E+ + ++ + A D A+A Sbjct: 270 AVLMLARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANA 311 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 29/222 (13%) Query: 154 EFAVYSLYFESC--------RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 A+ + E+ R+G A +A+ P + + + + + Sbjct: 158 ALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASGHRI 217 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A + + + A + +L+A + +G M + A + +L N A + Sbjct: 218 EADVAVCRALRLAPDSPP----ILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLM 273 Query: 266 AAKSLISQNKKRKAEVI------LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 A+ L + ++ + +E +A+++ + N + +L A+ L + Sbjct: 274 LARQLRAMGRRDLSAETYLRLAGIEGA-------GVAHLFDAANALNEMSRLPEAVALYQ 326 Query: 320 --INKESVESLV--IVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + +E S V + E+G +D+A A +++P Sbjct: 327 ALLAREHDHSEVWNNLGNALRELGELDRAAECYETAERLSPD 368 >gi|17229191|ref|NP_485739.1| hypothetical protein all1699 [Nostoc sp. PCC 7120] gi|17135519|dbj|BAB78065.1| all1699 [Nostoc sp. PCC 7120] Length = 293 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 47/145 (32%), Gaps = 16/145 (11%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------- 176 +L Q A +L A+ + +A Sbjct: 121 VLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGMVVLLLDQQRPEAAVGLLQDTLTN 180 Query: 177 ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIAR 232 A +A I P + + ++ + K + +AI+ +Q +K+ K++ ++A+ Sbjct: 181 AAQANTIQPGSVDVVAVQVLLGNVHAAQKRYPQAISAFDQAIQKDTKDFRP-----VLAK 235 Query: 233 SLENADKGDMIASYHDAIESLKLCD 257 ++ +G + +L L Sbjct: 236 AMLLKQQGKATEAKPLFDSALALAP 260 >gi|298530387|ref|ZP_07017789.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509761|gb|EFI33665.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] Length = 205 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 37/118 (31%), Gaps = 6/118 (5%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +++ + R D +A++Y +A+ SPD + + + ++ K Sbjct: 31 GVHYMALR--DFETARQYLQEAIRKSPDLAEAYVQLGGIAMNEGDLDGCFSYNEMASK-- 86 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A+ + +GD+ + ++ + A + Q Sbjct: 87 --IRHRFAVPHGNMGFVHLQRGDVDKAIASLKRAISFDPQFVQAHATLGNAYYMQGDL 142 >gi|209527318|ref|ZP_03275827.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209492244|gb|EDZ92590.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 300 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 14/168 (8%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 +A + +L Q A + +L+ A+ Sbjct: 95 GQVADVVEPLQRLAQLHPETPEYGILLAQAQEYTGNPEGAAQSYRRILEQRPGEVQALQG 154 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLAKEWSRAIT 209 L +A L +P + Y + + AI Sbjct: 155 LVSLLISQNRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQQRYQEAIA 214 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ KN++ R ++A+++ +G+ + E++ L Sbjct: 215 VYDEAIKNSESDFRP----VLAKAIILRQQGNPEDAELLFAEAIDLAP 258 >gi|91781716|ref|YP_556922.1| hypothetical protein Bxe_A4130 [Burkholderia xenovorans LB400] gi|91685670|gb|ABE28870.1| Putative membrane protein [Burkholderia xenovorans LB400] Length = 613 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 102/325 (31%), Gaps = 54/325 (16%) Query: 108 SYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--L 160 + Q + L +L ++AL Q A++ + + A + + Sbjct: 67 ASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEI 126 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + D +A + +P++ + VL+ A L ++ Sbjct: 127 ALAAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGRPDDAEPILARELARVPA 183 Query: 221 WNRNRAILLI--------------------------------ARSLENADKGDMIASYHD 248 NR AIL + A + + D + Sbjct: 184 DNRGSAILALQLLLSRGPNRIGGLHVLQDLLKNDLNRPEAQLALARQQLVSDDAPGARKS 243 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSE 305 ++L L + + A++ ++ ++++ LEK + NP H +A +L S+ Sbjct: 244 LEQALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASD 301 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---E 359 K+ + N + L+ ++ I ++ + ++A + P + Sbjct: 302 RLDDAQKQFEIMHRNNANDLTPLMALALIKIQQKNFNEAQTYLTQYAQQAEKTPGADPGQ 361 Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384 ++ LAQ+ N W Sbjct: 362 AYIYLAQL-SLEQKNDAAASDWLNK 385 >gi|15669131|ref|NP_247936.1| hypothetical protein MJ_0941 [Methanocaldococcus jannaschii DSM 2661] gi|3915952|sp|Q57711|Y941_METJA RecName: Full=TPR repeat-containing protein MJ0941 gi|2826352|gb|AAB98947.1| hypothetical protein MJ_0941 [Methanocaldococcus jannaschii DSM 2661] Length = 338 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 60/198 (30%), Gaps = 15/198 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREF 155 ++ + RK V E + +L L E A + + P Sbjct: 12 GDMRMNRKRTPRVDTL-----EAVANVLRAYRELFEGNLIKAL-YYVDKALELEPDFYLA 65 Query: 156 A-VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + L + G++ A + L P V Q Y ++ A+ N+ Sbjct: 66 LFLKGLALSAK--GEIKEAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALKCYNKA 123 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 E A LL LE G+ E L N + + A+ L Sbjct: 124 L--GIENRFLSAFLLKTICLEFL--GEYDELLKCYNEVLTYTPNFVPMWVKKAEILRKLG 179 Query: 275 KKRKAEVILEKIWKVNPH 292 + A + L + ++ PH Sbjct: 180 RYEDALLCLNRALELKPH 197 >gi|311693601|gb|ADP96474.1| tetratricopeptide TPR_2 repeat protein [marine bacterium HP15] Length = 592 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 86/304 (28%), Gaps = 44/304 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEY----------LVYLLEVQIALAERQYNIAHEKL 143 + K + + + T L LL +IA +Y+I Sbjct: 31 ASLTGTEEAPAKSETVAAGEKTEPQPPVEYADFEPETLYLLLSAEIAAQRGRYDITLVNY 90 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + + + + + N+ ++ A LDI PD Q V + Sbjct: 91 LKAAKQSRDQVVIERA-MRIAQSLNGDNAQKQLAELWLDIDPDNLQAHRISAIQAVKGND 149 Query: 204 WSRAITFLNQKKKNAKEW--------------NRNRAILLIARSLENADKGDMIASYHDA 249 AI + + + + + +L + + + Y A Sbjct: 150 LQTAIHHMERIMDQGGDADFDSLAAIAANLPPEQQQELLALYNEMSDRHPDTPELEYSIA 209 Query: 250 I---------ESL-KLCD------NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292 + ++L +L N A I L +K A L + P + Sbjct: 210 LLLKVTGQPQQALDRLEPLLQENANFQPAIILKGDLLYQTGQKSSALDYLLTNTRRFPGN 269 Query: 293 PEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ +Y + RL + ++ + + +ALE G D A + Sbjct: 270 RQMGTLYGRMLINEGELQAAQDEFNRLVKRYPDTPGLRLSHALVALENGQTDLARQELTQ 329 Query: 351 AMKI 354 + Sbjct: 330 LAEQ 333 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 5/127 (3%) Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 AT+AL+ PD + A Y + + A K E A+ L A Sbjct: 429 ATEALEEHPDNIEIRYARAMLYDGIGQPADA----EADLKRIIEQEPENAVALNALGYIL 484 Query: 237 ADKGDMI-ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + D + + ++L+L N+ L + + A L + W P PE+ Sbjct: 485 TTRTDRLREARGYIEKALRLDPNNPAILDSMGWVLFLEGQLEPALEYLSRAWAAFPDPEV 544 Query: 296 ANIYTHL 302 A Y Sbjct: 545 AAHYGEA 551 >gi|313498608|gb|ADR59974.1| Bacteriophage N4 receptor, outer membrane subunit [Pseudomonas putida BIRD-1] Length = 1001 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 15/143 (10%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQR 175 + L A A + R A + GD ++A+R Sbjct: 491 DPGNRLPLAYALEAAGDSETAQPIWRSLPDSAFTDNARLTAARG----ALNAGDADAARR 546 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 Y A S W A + Q + A+ F Q ++ + A A+ Sbjct: 547 YWDAAAHQS-ADDWALGAAIAQR--QGDPQAALGFQRQALAHSPRADHYYAASSTAQL-- 601 Query: 236 NADKGDMIASYHDAIESLKLCDN 258 GD S E+++L N Sbjct: 602 ---AGDSAQSTAWLAEAVRLAPN 621 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 8/93 (8%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIPATRE 154 AA + A+ + + N L + AL + A + Q Sbjct: 504 AAGDSETAQPIWRSLPDSAFTDNARLT---AARGALNAGDADAARRYWDAAAHQSADDWA 560 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + R GD +A + +AL SP A Sbjct: 561 LG----AAIAQRQGDPQAALGFQRQALAHSPRA 589 >gi|224085786|ref|XP_002307696.1| predicted protein [Populus trichocarpa] gi|222857145|gb|EEE94692.1| predicted protein [Populus trichocarpa] Length = 797 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 11/195 (5%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257 + A + A+ LL + +G ++++ E+ LC Sbjct: 278 GRYKEAKEEFLLALEAAEAGGNQWGYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCP 337 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 A +L + + A LE+ + P H ++A+ H + E+ ++ Sbjct: 338 THFRALKLLGSALFGVGEYKAAVKALEEAIFMKPDYADAHCDLASA-LHAMGEDEKA-IE 395 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 + ++ V++L + + +++G +A + + P L + + Sbjct: 396 VFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGA 455 Query: 373 HNTDKILYWTQSALH 387 T++ + AL Sbjct: 456 GETEEAKKALKEALK 470 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 54/186 (29%), Gaps = 35/186 (18%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 SA Y +A + P + + E+ A+ L + ++ A +A Sbjct: 324 SACEYYREAAILCPTHFRALKLLGSALFGVGEYKAAVKALEEAIFMKPDY--ADAHCDLA 381 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L G+ + +++ L + A + + ++A Sbjct: 382 SALHAM--GEDEKAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRAS----------- 428 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +YT + L + + + L G ++A A Sbjct: 429 -----EMYTRV--------------LAVW-PNHWRAQLNKAVSLLGAGETEEAKKALKEA 468 Query: 352 MKIAPR 357 +K+ R Sbjct: 469 LKLTNR 474 >gi|194363907|ref|YP_002026517.1| HemY domain-containing protein [Stenotrophomonas maltophilia R551-3] gi|194346711|gb|ACF49834.1| HemY domain protein [Stenotrophomonas maltophilia R551-3] Length = 431 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 129/394 (32%), Gaps = 20/394 (5%) Query: 4 LIRYFFVISLVICSFIIVS----HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 L+ +++ + + + + +V++ +G Y ++ + + + LL+ Sbjct: 7 LVVLLLAVAIGVVAAQWLGADDLNRFGEVTLRYGGYDYHSNLPKVALLSVVAVLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 ++ + +G L GL + A K+ ++ Sbjct: 67 SLIAAPF-------RAWGRYRRKQGRVRLIDGLQAYEHGQWQRAEKLLDGAAKDPEVSAV 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYAT 178 L V+ A A L+ + + AT + + + + + D +A A Sbjct: 120 ALAN--AVRSAQARADGAAGEALLQRLGESDATLQALLRAEQLLARDLPVDAINALDVAA 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P W+ + Q A E + L Q K + N L A++L A Sbjct: 178 -IQPLPPRGLWLRTEALAQAGRAHEAYGQLGALRQSKVLPADANSELEARLAAQALLEAA 236 Query: 239 KGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + +A+ +A ++L+ + + A A +L A + LE E+ Sbjct: 237 DVNALAAQWEATPKALRPTPDVVGAYASRAVALSWDE---PALLALEHALDQRWDDELVA 293 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +Y L +E + R ++ S + ++AL D A A A+ Sbjct: 294 LYGRLPAERLATRQANLARWRNVHDSSAALRLAQGRVALGQQQWDAADAFLHEAIAAGAG 353 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L ++ A + +AL Sbjct: 354 APAWEALGEL-FAQRGDHALAAQCLANALRLQRG 386 >gi|146313559|ref|YP_001178633.1| cellulose synthase subunit BcsC [Enterobacter sp. 638] gi|145320435|gb|ABP62582.1| cellulose synthase operon C domain protein [Enterobacter sp. 638] Length = 1160 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 61/168 (36%), Gaps = 6/168 (3%) Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL Q AL + A + I T +AV L + D +A+R+ +AL Sbjct: 354 LLIQQGDAALKANNISQAERHYQQARNIDNTDSYAVLGLGDAAVARKDNAAAERFYRQAL 413 Query: 182 DISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENA 237 + + Y ++ + I L ++ + + L ++ + Sbjct: 414 RMDSGNSNAVRGLANIYRAQSPEKADQFIQSLTASQRRSIDDIQRSLDNDRLAQQAEQLE 473 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++G + L L ++ + ++ L S ++ +A+ ++ + Sbjct: 474 NQGSFAQAAEIQRRRLALDPGNVWITYRLSRDLYSAGQRSQADTLMRQ 521 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 108/337 (32%), Gaps = 28/337 (8%) Query: 66 LSCPAMLFHMLHKRNYDK--GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY--- 120 + H RN D Y L G ++A + A + + + + ++ Sbjct: 366 NNISQAERHYQQARNIDNTDSYAVLGLGDAAVARKDNAAAERFYRQALRMDSGNSNAVRG 425 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYA 177 L + Q Q+ + + R L ++ + G A Sbjct: 426 LANIYRAQSPEKADQFIQSLTASQRRSIDDIQRSLDNDRLAQQAEQLENQGSFAQAAEIQ 485 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARS 233 + L + P W+T + + A + S+A L ++ + K + + L + Sbjct: 486 RRRLALDPGNVWITYRLSRDLYSAGQRSQA-DTLMRQLASQKPGDPEQVYANGLYLSGNN 544 Query: 234 LENADKGDMIASYHDAIESL--KLCDNSIMASIC-AAKSLISQNKKRKAEVILEKIWKVN 290 + A + D +L D + A L ++R+AE +L + Sbjct: 545 QDRAALAHLNTLSRDKWNGNIQELADRLQGDQVLETANRLRDSGQEREAETLL----RQQ 600 Query: 291 PHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P ++ + + K + L + ++ ++++ ++++ L G D A A Sbjct: 601 PQSTRIDLTLADWAQQRGDRASAKAAYSTVL-QHEPQNTDAILGLTEVYLSEGDKDAARA 659 Query: 347 KAMLAMKIAPRKEIFLLL---AQIEQANSHNTDKILY 380 + + + + + QA +T Sbjct: 660 QLATLPAGQNSEPPSVNMQRRVALAQAELGDTAAAEQ 696 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 12/160 (7%) Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + + L A A +LQ A+ L Sbjct: 585 RDSGQEREAETLLRQQPQSTRIDLTLADWAQQRGDRASAKAAYSTVLQHEPQNTDAILGL 644 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-----YVLAKEWSRAITFLNQ-- 213 GD ++A+ A A + +Q+ + + A ++ Sbjct: 645 TEVYLSEGDKDAAR--AQLATLPAGQNSEPPSVNMQRRVALAQAELGDTAAAEQTFSKLV 702 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++ + + A++L + A G + +++ Sbjct: 703 PQAKSQPPSMDSALVLRDAARFQASNGQPQQALESYKDAM 742 >gi|300112905|ref|YP_003759480.1| tetratricopeptide repeat-containing protein [Nitrosococcus watsonii C-113] gi|299538842|gb|ADJ27159.1| tetratricopeptide repeat protein [Nitrosococcus watsonii C-113] Length = 387 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 84/222 (37%), Gaps = 21/222 (9%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNR 223 R G L+ A+ +AL ++ Y K W +AI + ++++ + Sbjct: 118 MRAGMLDRAESSFLEALKRRSHIGITLRQLLDLYQQEKNWYQAIAMAQKLREESGEATES 177 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + + + + ++L + A++ ++ I + ++A L Sbjct: 178 MIAHFYCELAEQRWVQRQAAETTWFIKQALASDWRCVRATLLQSRLAIEKGDYKRAIRCL 237 Query: 284 EKIWKVNPH--PE----IANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL 336 ++ + +P PE ++ Y HL ++ L E ++ + +I++K A Sbjct: 238 RQVERQDPDYLPEILKPLSECYRHLEGQDEF-----FFWLTEASERHPGCTSLILAKAAY 292 Query: 337 --EMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-----QIEQA 370 + G +A + +++ P E LLA IE A Sbjct: 293 LQQRGKQKEARYFLIEQLRVYPSVEALQQLLALGVPEDIEAA 334 >gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 374 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 19/220 (8%) Query: 146 MLQIPATREF---AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 M A + + L + GD ++A A+ ++P+ + + Sbjct: 1 MTDPKAVKFIIQQGMRCL-----QGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQ 55 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + AI +Q N A + + R + +D G A+ + ++ A Sbjct: 56 RYEEAIASFDQA----GVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEA 111 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRL 317 SL+ + ++A ++ NP+ + A N+ T+L LK + Sbjct: 112 WNSRGTSLMILGRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAA--LKSFDKA 169 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 I+ E + +++ D A A A+++ P Sbjct: 170 LHISPNHPEIWYNQGCLLMQLQKRDDAIASFNKALELKPD 209 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 77/219 (35%) Query: 168 GDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---- 221 G +A + KAL ISP+ P W + + + ++ AI N+ + + Sbjct: 157 GRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRD--DAIASFNKALELKPDHIGSW 214 Query: 222 -----------NRNRAILLIARSLE------------------NADKGDMIASYHDAIE- 251 A+L ++LE D +ASY A+E Sbjct: 215 INKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRLGRLQDAVASYDRALEC 274 Query: 252 ------------------------------SLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +L++ + + A +Q K A Sbjct: 275 MPENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNAVYNKGYCYAAQGKVTLAVN 334 Query: 282 ILEKIWKVNPHPEIANIYTHL-LSENTVGKL---KRALR 316 +E+ KVNP Y + ++ + +L KR + Sbjct: 335 YIEQAIKVNP-----QKYLPVAKTDPDLERLRKNKRFQK 368 >gi|146311840|ref|YP_001176914.1| tetratricopeptide repeat protein [Enterobacter sp. 638] gi|145318716|gb|ABP60863.1| Tetratricopeptide domain protein [Enterobacter sp. 638] Length = 389 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 37/189 (19%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + ++ R Sbjct: 83 GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLVDETEFRVS 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + ++Q Y +W +AI + Sbjct: 143 AL----------------------------------QQLLQIYQSTSDWQKAIDTAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K K+ R A +L+ DM + + NS SI + +++ Sbjct: 169 KLGKDKQRVEIAHFYCELALQQMASDDMEKAMTLLKKGASADRNSARISIMMGRVFMAKG 228 Query: 275 KKRKAEVIL 283 + KA L Sbjct: 229 EFAKAVECL 237 >gi|332212282|ref|XP_003255248.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 2 isoform 1 [Nomascus leucogenys] Length = 472 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 37/220 (16%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMHEEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLE--EINKESVESLVIVSKIALEMG 339 + P H +I Y RA L+ + + + + ++ Sbjct: 274 LEYIPNNAYLHCQIGCCY-------------RAKVLQVMNLRENGMHGKRKLLEL----- 315 Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 I A A A + + +LA + E+A Sbjct: 316 -IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354 >gi|262305003|gb|ACY45094.1| acetylglucosaminyl-transferase [Libinia emarginata] Length = 289 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGYTEDATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYTEDATRLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 38.4 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q + A E L++ T ++ +L G A R KAL++ P+ Sbjct: 27 ANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYTEDATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYDARMKKLVAIVGEQLERNRLPSVHPHH 236 >gi|66823629|ref|XP_645169.1| TPR repeat-containing protein [Dictyostelium discoideum AX4] gi|60473393|gb|EAL71339.1| TPR repeat-containing protein [Dictyostelium discoideum AX4] Length = 1014 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 79/213 (37%), Gaps = 21/213 (9%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD+ A+ A +P A + VLA + A + Q K Sbjct: 284 GDIKKARLLFKSATTSNPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVW-- 341 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +ENA+ + +++++ +S+ + AA Q K +K +L + Sbjct: 342 ------IENANLQTPDNAKIVLAQAVRVIPHSVKIWLYAANLE-KQLKMKK--RVLRRAL 392 Query: 288 KVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + P ++ L E+ L RA E ++++ + ++ + + ++A Sbjct: 393 EFIPTSVKLWKEAVELEEPEDARILLGRA---VECVPDNIDLWLALA----NLETYEKAR 445 Query: 346 AKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDK 377 A + P I++ AQ+E++ N + Sbjct: 446 EVLNKARQALPSSSEIWISAAQLEESQGKNDNV 478 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 8/126 (6%) Query: 163 ESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E G + +A L I P + W+ A +++ L+Q + A + Sbjct: 545 ECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEKQ------HGTKETLDQTLEKATQ 598 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 L + + E GD+ + ++ K S + A K N+ R A Sbjct: 599 KCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVAAVKIESEMNELRAAR 658 Query: 281 VILEKI 286 +L+K Sbjct: 659 NLLKKA 664 >gi|313200670|ref|YP_004039328.1| hypothetical protein MPQ_0923 [Methylovorus sp. MP688] gi|312439986|gb|ADQ84092.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688] Length = 467 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 14/178 (7%) Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W ++A+ Y+ ++W+ A L Q + A ++ A + LE G A+ Sbjct: 20 AWFSQAL--AYMRIEQWAEAEKALRQALQLAPDY--AEAHCNLGYVLEQC--GHWDAAED 73 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN----IYTHL 302 S + + A++ L ++ +AE I ++ + + P + +YT L Sbjct: 74 AYRSSFQHAPALLNAALNLGVLLQRMSRFDEAESIYQQAMRHHSEQPALWTNLGILYTAL 133 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 E+ + R L + + ++ +S + L G ++ A + P I Sbjct: 134 QREHEAERAHR-HAL-NMAPDYRKARFNLSYLLLRQGRFEEGWRCLE-ARTLTPHASI 188 >gi|161870730|ref|YP_001599903.1| tetratricopeptide repeat protein [Neisseria meningitidis 053442] gi|161596283|gb|ABX73943.1| periplasmic hypothetical protein [Neisseria meningitidis 053442] Length = 402 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 70 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 181 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + + A+E+ K C Sbjct: 182 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 241 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 292 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395 >gi|326479388|gb|EGE03398.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97] Length = 851 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G++++ +R +A + Sbjct: 492 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 550 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230 P+ + A V+ + +A L+ ++ A NR+ A+ L+ Sbjct: 551 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 610 Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + L+ G + + + C S+ + A++ Sbjct: 611 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 670 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E L +A L +E S ++ S+ Sbjct: 671 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 728 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + + + K+ +F+ +A+I +K + W + A+ A D Sbjct: 729 SIWHLESRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 786 >gi|325145134|gb|EGC67416.1| hypothetical protein NMBM01240013_0360 [Neisseria meningitidis M01-240013] Length = 389 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + + A+E+ K C Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 331 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|318042950|ref|ZP_07974906.1| hypothetical protein SCB01_14654 [Synechococcus sp. CB0101] Length = 526 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 64/186 (34%), Gaps = 15/186 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G + A+ +A ++ + P + + W AI L + + + Sbjct: 40 LALGQSSEAEHHARLSVQNDAELPEAFLNLGNALHAQERWDDAIQALQEAIRLRPLF--- 96 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + K ++ + S++ + A A + + + +A Sbjct: 97 -APALSSLGNALRAKDQLLEAEEMFRRSMEAEPSYFQAYSNLAITQRALGQLDQALDTAL 155 Query: 285 KIWKVNP-----HPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALE 337 K ++ P H + I H E L+R+L L + ES ++ I L+ Sbjct: 156 KALELAPDHADVHSNLGVIC-HERGEWGEAEAALRRSLELA---PDHAESHFSLASILLQ 211 Query: 338 MGSIDQ 343 G +Q Sbjct: 212 QGDYEQ 217 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 6/142 (4%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L L A+ Q A E ++ + A +L Sbjct: 82 AIQALQEAIRLRPLFAPALSSL--GNALRAKDQLLEAEEMFRRSMEAEPSYFQAYSNLAI 139 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 +G L+ A A KAL+++PD V + EW A L + + A + Sbjct: 140 TQRALGQLDQALDTALKALELAPDHADVHSNLGVICHERGEWGEAEAALRRSLELAPD-- 197 Query: 223 RNRAILLIARSLENADKGDMIA 244 A + + +GD Sbjct: 198 --HAESHFSLASILLQQGDYEQ 217 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 80/222 (36%), Gaps = 15/222 (6%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G A + +T+ALD+ D+ + + S A + + + A Sbjct: 8 QGSYLEAIKASTRALDLQSDSAAAHANHSMILLALGQSSEAEH--HARLSVQNDAELPEA 65 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L + +L ++ D + E+++L A +L ++++ +AE + + Sbjct: 66 FLNLGNALHAQERWD--DAIQALQEAIRLRPLFAPALSSLGNALRAKDQLLEAEEMFRRS 123 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P + +A L + L AL+ E+ + + + I E G Sbjct: 124 MEAEPSYFQAYSNLAITQRALGQLDQA--LDTALKALELAPDHADVHSNLGVICHERGEW 181 Query: 342 DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWT 382 +A A ++++AP E LA I + + W Sbjct: 182 GEAEAALRRSLELAPDHAESHFSLASIL-LQQGDYE--QGWL 220 >gi|170571769|ref|XP_001891856.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Brugia malayi] gi|158603386|gb|EDP39326.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, putative [Brugia malayi] Length = 1136 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 108/331 (32%), Gaps = 39/331 (11%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEV----------- 127 GY L L++ ++ A +++YVS + L LL+ Sbjct: 186 GYINLAAALVA--TGDLDQA--VNAYVSALQYNPDLYCVRSDLGNLLKAMGRLEDAKVPL 241 Query: 128 ----QIALAER--QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 Q + ++ A +L G++ A + KA+ Sbjct: 242 YIDVQARFVQGIVNSTELLGCYLKAIETQPQFAVAWSNLGCVFNAQGEIWLAIHHFEKAV 301 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P+ + A+ + RA+ + A N A++ + ++G Sbjct: 302 QLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLAG----NHAVVHGNLACVYYEQGL 357 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IA 296 + + +++ L N A A +L + +AE K ++ P H + +A Sbjct: 358 IDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLA 417 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 NI +L L EI E + ++ I + G + A A++IAP Sbjct: 418 NIKREQGKIEDATRLY-LKAL-EIYPEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAP 475 Query: 357 R-KEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + + + + + L A+ Sbjct: 476 TFADAYSNMGNTLK-EMGDVGGALQCYTRAI 505 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 55/179 (30%), Gaps = 20/179 (11%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L E+ +A KAL + P + + A + + Sbjct: 390 GLVSEA------EAAYN---KALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIY 440 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E+ A + +G + + + E++++ A +L Sbjct: 441 PEF----AAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGG 496 Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A + ++NP H +A+I H S N ++ ++ + ++ ++ Sbjct: 497 ALQCYTRAIQINPGFADAHSNLASI--HKDSGNVPEAIQSYSTALKLKPDFPDAFCNLA 553 Score = 45.7 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A KA+D+ P+ P + Sbjct: 325 DRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLAN 384 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 S A N+ + ++ L + ++G + + +++L++ Sbjct: 385 ALKEKGLVSEAEAAYNKALQLCPTHADSQNNL----ANIKREQGKIEDATRLYLKALEIY 440 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K + A ++ ++ P A+ Y+++ + + G L Sbjct: 441 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT--FADAYSNMGNTLKEMGDVGGAL 498 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G++ +A A+K+ P Sbjct: 499 QCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQSYSTALKLKPD 544 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ Q H + L I + + A L+I A Sbjct: 390 GLVSEAEAAYNKALQLCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 447 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I+P + + A+ + + Sbjct: 448 SNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGGALQCYTRAIQI 507 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 508 NPGF----ADAHSNLASIHKDSGNVPEAIQSYSTALKLKPDFPDAFCNLAHCL 556 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A LQ+ T + +L G + A R KAL+I P+ Sbjct: 383 ANALKEKGLVSEAEAAYNKALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPE 442 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + AI + + A + A + GD+ + Sbjct: 443 FAAAHSNLASILQQQGKLQDAINHYKEAIRIAPTF----ADAYSNMGNTLKEMGDVGGAL 498 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + + +L Sbjct: 499 QCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQSYSTALKLK--PDFPDAFCNLAHCL 556 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 557 QIICDWNDYDNRMKKLIAIVDDQLQKKRLPSVHPHH 592 >gi|149062743|gb|EDM13166.1| rCG47217 [Rattus norvegicus] Length = 412 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 12/120 (10%) Query: 177 ATKALDISPDAPWVTE--AVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRAILLIA 231 KAL+ P P T A+ + +W + I L Q + + + +L + Sbjct: 109 FEKALEKDPKNPESTSGWAIANYRLD--DWPASNDYIDSLEQAISLSPDNTYVKVLLAM- 165 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + E+LK ++I + AAK + + +A +L+K + P Sbjct: 166 ----KLEEVHENRAKELVEEALKKDPSAIDTMLGAAKFYVKVHDTDRAIQLLKKALESMP 221 >gi|71906424|ref|YP_284011.1| TPR repeat-containing protein [Dechloromonas aromatica RCB] gi|71846045|gb|AAZ45541.1| TPR repeat [Dechloromonas aromatica RCB] Length = 796 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 86/279 (30%), Gaps = 13/279 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L E + AE +Y + L+ ++ A L + I DL +A+ + +A+ Sbjct: 10 RLQEGRRLFAEGRYGESAAVLQALVGDAPGNAAAWLELGRLALTIPDLPAARDFLNEAVA 69 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + + W A +L + A + +L + G++ Sbjct: 70 HDPGNIGALSLLGEVLRRDGAWLEAQAYLQRALAVAPD----DLLLACRLANCYVGSGEL 125 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIAN 297 + L + + L +AE L + P+ + + Sbjct: 126 FKANELLSGLLARYPSVGELYLLRGLVLYQLRHDAQAEADLHLCLGLAPNSAQALAALGD 185 Query: 298 IYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 IY E + RA +L + + + ++L + +A ++ AP Sbjct: 186 IYRDRELYEEAADFVDRAYQLA---PDDIHVARARAYLSLALRDWGKAADILAEVLQQAP 242 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395 + + S N + + AL W+ Sbjct: 243 SDVVAAVNRVAALIESGNALAAIDALEDALRVGASEPWV 281 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 6/138 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ +A AL + PWV E + + +W A+ L Sbjct: 256 IESGNALAAIDALEDALRVGASEPWVHEMLGAMFAQRGDWKIAVENLEASVAREPTSTTG 315 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 IL++A S G+M + A + L++ + + A I I + + + Sbjct: 316 WNILIVAYSKL----GEMEKAEAAAKKILEIDPHHVNALINLGGLKIDLGFHDEGIQLFQ 371 Query: 285 KIWKVNPHPEIANIYTHL 302 + + PE Y+ L Sbjct: 372 RA--LAQAPESPAAYSGL 387 >gi|332141359|ref|YP_004427097.1| Response regulator with TPR repeat [Alteromonas macleodii str. 'Deep ecotype'] gi|327551381|gb|AEA98099.1| Response regulator with TPR repeat [Alteromonas macleodii str. 'Deep ecotype'] Length = 546 Score = 48.4 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 16/141 (11%) Query: 128 QIALA--ERQYNIAHEKLEMMLQIPATREFAVYS----LYFESC-RIGDLNSAQRYATKA 180 Q + + N A + +E +L P+ L E RIG A + Sbjct: 135 QAYSLIEQGECNSAIDHIESLLDSPSH----YKGHCEQLLVELYWRIGQPEKALDVLSDY 190 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 +D P W A+ + Y+ E+ +AIT + K + A ++A++ + D G Sbjct: 191 IDGKPVL-WAQIAIAKTYLQLNEFDKAITTAKRTLKRNRF--NADAYDILAQAQQKLDDG 247 Query: 241 DMIASYHDAIESLKLCDNSIM 261 + + E++KL S+ Sbjct: 248 E--KALDAIKEAIKLSPYSLP 266 >gi|260825694|ref|XP_002607801.1| hypothetical protein BRAFLDRAFT_199459 [Branchiostoma floridae] gi|229293150|gb|EEN63811.1| hypothetical protein BRAFLDRAFT_199459 [Branchiostoma floridae] Length = 827 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 79/214 (36%), Gaps = 22/214 (10%) Query: 163 ESCRIGDLNS-AQRYATKALDISP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQ- 213 + D ++ A Y +A + P + + + + + + +A+ + Sbjct: 455 HALENQDRHAEALEYFLRAAGVQPDDIGAHMNVGRAYKNLERFQDSEEAYRKAMALMPSV 514 Query: 214 ---KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 KK + + ++ + +L D ++ + +++ + + A I + L Sbjct: 515 IPGKKYATRVAPSHLSVYVNLANLIREDDTRLMEADSLYRQAISMRPDFTQAYINRGEVL 574 Query: 271 ISQNKKRKAEVILEKIWKV---NP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + N+ ++A+ E ++ NP H + + L LK + +++ Sbjct: 575 MRLNRSKEAQQSYETALQLDSDNPDIHYNLGIVL--LEQGERSQALKCLTKALQLDPHHK 632 Query: 326 ESLV---IVSKIALEMGSIDQAHAKAMLAMKIAP 356 +SL ++ + + + +A+ + ++ P Sbjct: 633 QSLFNSAVMMQESGDPALRPEAYRRLYEVLEQEP 666 >gi|186477739|ref|YP_001859209.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gi|184194198|gb|ACC72163.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum STM815] Length = 789 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 61/202 (30%), Gaps = 17/202 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD N+A A+++ P + + A+ + ++ Sbjct: 116 REAGDANAAMMSCATAIELRPGYAEAYNNLGNALKDLGDLGNAVLAYQKAVSFRPDY--- 172 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + A +GD AS +L L + + AK L ++ + A L+ Sbjct: 173 -ADAFGNLARAEAGRGDADASIAAFRRALALDPDRADSYDSLAKLLHARGEIDAAIDTLQ 231 Query: 285 KIWKVNP-----HPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + +P H +A + L A+ L V + Sbjct: 232 QATRRDPADAARHRLLAQWLLGRQRWDEAAHALTSAVELA---PNDAAGYVELGDAYQHA 288 Query: 339 GSIDQA----HAKAMLAMKIAP 356 +D A LA + AP Sbjct: 289 DKLDAAILCYRTATELAPRDAP 310 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 88/296 (29%), Gaps = 33/296 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A + + + E L A + + A Sbjct: 118 AGDANAAMMSCATAIELRPGYAEAYNNL--GNALKDLGDLGNAVLAYQKAVSFRPDYADA 175 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-K 215 +L GD +++ +AL + PD +++ + E AI L Q + Sbjct: 176 FGNLARAEAGRGDADASIAAFRRALALDPDRADSYDSLAKLLHARGEIDAAIDTLQQATR 235 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 ++ + R+R LL L + + A+E L N + + +K Sbjct: 236 RDPADAARHR--LLAQWLLGRQRWDEAAHALTSAVE---LAPNDAAGYVELGDAYQHADK 290 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A + ++ P H +A + L+ A + + S V Sbjct: 291 LDAAILCYRTATELAPRDAPAHHRLAVALLKQRRADEA--LESAQKAVSLEPHSAVPHVN 348 Query: 331 V---------SKIALEM--------GSIDQAHAKAM-LAMKIAPRKEIFLLLAQIE 368 + + A+ G ++ AH + + AP L+A E Sbjct: 349 LGDVLSVLGDADGAIASYRRGIALDGEMELAHNRLLFDLATHAPTPPAVTLVAARE 404 >gi|330502031|ref|YP_004378900.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01] gi|328916317|gb|AEB57148.1| TPR repeat-containing protein [Pseudomonas mendocina NK-01] Length = 569 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 44/278 (15%), Positives = 93/278 (33%), Gaps = 43/278 (15%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 +F E L LL ++A +++IA QI A + + + +G +A Sbjct: 41 SFSQESLFALLTAELAGQRNRFDIALGNYVQQAQITGDAGVAERA-FRIAEYLGAEQAAL 99 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-------------- 220 A +P A Q A + ++T++ Q + + Sbjct: 100 DSALIWASNAPGNIDAQRAAAVQLARAGRYDESMTYMEQVLQRQGDTHFDFLALSAAETD 159 Query: 221 ----------------WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 N + + LL +++ G + +E + + + Sbjct: 160 PDTRAGLLQGFDRLLSKNPDNSQLLFGKAILLQQDGRAEEALEL-LEDSPASADQVSPIL 218 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRAL----RL 317 A+ L S + +A +L+K + N P+ + Y LL E +L A +L Sbjct: 219 LRARLLQSLGRGDEALPLLQKGIRKN--PDDKRLRLTYARLLVE--QDRLDDAKGEFSKL 274 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + N + ++ + LE + ++A ++ Sbjct: 275 VQENPNDDDLRFSLALVCLEAEAWEEAIVYLEELVERR 312 >gi|256376883|ref|YP_003100543.1| hypothetical protein Amir_2764 [Actinosynnema mirum DSM 43827] gi|255921186|gb|ACU36697.1| TPR repeat-containing protein [Actinosynnema mirum DSM 43827] Length = 683 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 4/146 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E E +L + Y+L +GD A TK L++ P + Sbjct: 482 GRDEEALEAFERVLPLSPPFPEVHYNLGDTRLALGDAEGALAEFTKVLELDPAHQEARLS 541 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + A+ + + + R + A + D G + Sbjct: 542 RAELRCDLGDHAGALADVEAGLALSPDNPMLRCVQATALA----DAGAPDQARTLIESLT 597 Query: 254 KLCDNSIMASICAAKSLISQNKKRKA 279 A A+ + +A Sbjct: 598 TTHPTCAQAWAIRARLEYESGELPQA 623 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 13/192 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAK------EWNRNRAILLIARSLENADKGDMIASYHDAIES 252 V + A+ L + E +R++L R+ NA G + + D Sbjct: 401 VRQGRPAEALRLLEEGMARLDADLAPGEHPLHRSVLRYNRAQVNAMTGKVEEALADYQAV 460 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307 L + A L + +A E++ ++P H + + L + Sbjct: 461 AALDPDFPEHHFHVASMLRKLGRDEEALEAFERVLPLSPPFPEVHYNLGDT--RLALGDA 518 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 G L ++ E++ E+ + +++ ++G A A + ++P + + Sbjct: 519 EGALAEFTKVLELDPAHQEARLSRAELRCDLGDHAGALADVEAGLALSPDNPMLRCVQAT 578 Query: 368 EQANSHNTDKIL 379 A++ D+ Sbjct: 579 ALADAGAPDQAR 590 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 77/268 (28%), Gaps = 15/268 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 +AR +H H L Q+ + A + + + + Sbjct: 414 EEGMARLDADLAPGEHPLHRSVL-RYNRAQVNAMTGKVEEALADYQAVAALDPDFPEHHF 472 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + ++G A + L +SP P V + + + A+ + + Sbjct: 473 HVASMLRKLGRDEEALEAFERVLPLSPPFPEVHYNLGDTRLALGDAEGALAEFTKVLELD 532 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 R ++R+ D GD + D L L ++ M A +L + Sbjct: 533 PAHQEAR----LSRAELRCDLGDHAGALADVEAGLALSPDNPMLRCVQATALADAGAPDQ 588 Query: 279 AEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A ++E HP A + S L + ++ E + Sbjct: 589 ARTLIES--LTTTHPTCAQAWAIRARLEYESGELPQALADFDESVRLL-DAPEVRYNRAL 645 Query: 334 IALEMGSIDQAHA--KAMLAMKIAPRKE 359 + E G +A + +LA Sbjct: 646 VLEETGDYTRAAQDYREVLARTEDEDAR 673 >gi|40063714|gb|AAR38495.1| TPR repeat protein [uncultured marine bacterium 583] Length = 697 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 65/199 (32%), Gaps = 13/199 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IG+L+ A + KAL I PD V + + L + A+ + ++ Sbjct: 52 KTIGELDEAVKSFEKALAIKPDYTEVNYNLGLTLQDL-GQLDAAVKSYEKAIAIKPDY-- 108 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + + G + + +++ + + + A +L + A Sbjct: 109 --ANACNNLGVTLQELGQLDTAVKSYEQAIAIKPDFVEAYYNLGVTLQELGQLDAAVECY 166 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 +K + P H + N L + +K + I E + + + Sbjct: 167 KKALAIKPDYAEAHYNLGNALKDLGQLDAA--VKSYEQALAIKPEYANAYFNRGHVLKNL 224 Query: 339 GSIDQAHAKAMLAMKIAPR 357 +D+A A+ I P Sbjct: 225 KRLDEALVSYESAIAIKPD 243 >gi|116621058|ref|YP_823214.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224220|gb|ABJ82929.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] Length = 670 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 76/266 (28%), Gaps = 43/266 (16%) Query: 167 IGDLNSAQRYATKAL---DISPDAPWVT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 GDL +A+ A +++P P + + ++ + + + ++ + Sbjct: 395 SGDLLAARAEAADPGYRGEVAPYYPDAGVDGLYLAVAQVRDGANLDGGIPRLREAIERLK 454 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + + + GD + E+L++ A +LI +A Sbjct: 455 PRQPEFYLELAKAYSKTGDSGQAVRWCEEALRVRPGFNPAIRELGATLIQAGDFSRAAET 514 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKR----------------------------A 314 L + + + N Y L + R Sbjct: 515 LRQARGPSAQTNLGNAYLRLGRIDLAESALRTQSEDPDANNLLGVAESARNNYGSAEQFF 574 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEI-----FLLLA--Q 366 + E+ + E+ ++ + +A A+ P E LLLA Sbjct: 575 RKAIELQTDHAEAHHNLANLLASRRDYAEAAYHFRQAIAANPGYAEAHHRFGLLLLATGA 634 Query: 367 IEQANSHNTDKILYWTQSAL-HAMPD 391 I+ A + AL A D Sbjct: 635 IDHAQREIEAAVR--LDPALAEARRD 658 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 21/219 (9%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + GD A R+ +AL + P + + A ++SRA L Q + + Sbjct: 464 LAKAYSKTGDSGQAVRWCEEALRVRPGFNPAIRELGATLIQAGDFSRAAETLRQARGPSA 523 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + N A L + R I A+ + + A+ + ++N A Sbjct: 524 QTNLGNAYLRLGR----------IDLAESALRTQSEDPD---ANNLLGVAESARNNYGSA 570 Query: 280 EVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 E K + H +AN+ + + N E+ + Sbjct: 571 EQFFRKAIELQTDHAEAHHNLANLLASRR--DYAEAAYHFRQAIAANPGYAEAHHRFGLL 628 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANS 372 L G+ID A + A+++ P E LA I A Sbjct: 629 LLATGAIDHAQREIEAAVRLDPALAEARRDLADIIAAKG 667 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 23/184 (12%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-EF 155 A + A + L L + ++A L + P Sbjct: 505 AGDFSRAAETLRQARGPS-----AQTNL--GNAYLRLGRIDLAESALRTQSEDPDANNLL 557 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 V + SA+++ KA+++ D + ++++ A Q Sbjct: 558 GV-----AESARNNYGSAEQFFRKAIELQTDHAEAHHNLANLLASRRDYAEAAYHFRQAI 612 Query: 216 KNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 E + +LL+A G + + + +++L A A + + Sbjct: 613 AANPGYAEAHHRFGLLLLA-------TGAIDHAQREIEAAVRLDPALAEARRDLADIIAA 665 Query: 273 QNKK 276 + ++ Sbjct: 666 KGRR 669 >gi|300311388|ref|YP_003775480.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] gi|300074173|gb|ADJ63572.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] Length = 658 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 48/291 (16%), Positives = 99/291 (34%), Gaps = 48/291 (16%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL+++ A + + EY+ L L++ + + A E ++ Sbjct: 63 ARGLVAMHEGKFADAEAYLRKAIEADPENAEYMSNL--AGTVLSQDRIDEAIALYEHAIR 120 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 I + L D ++ Y A+ P+AP + Sbjct: 121 IDRDHRASRIGLANALHEKNDPEASVAYFEDAVKREPNAP-----------------GPL 163 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA---------DKGDMIASYHDAIESLK----L 255 + L + K +N A++L + L+ + + + Y +AIES K L Sbjct: 164 SHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAMEMYKEAIESHKTAILL 223 Query: 256 CDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSE--NTVG 309 A A S + N+ +A ++E P+ N Y L S +T Sbjct: 224 DPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIA------PKDPNAYVKLGSSYFSTSD 277 Query: 310 K----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ + E++ + + + I + G ++ A A+++ P Sbjct: 278 RFDDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRP 328 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 55/152 (36%), Gaps = 7/152 (4%) Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K + + +L + ++L+ D + + L + A+ + Sbjct: 10 HGKPATPPPKHPLQDLLDVRKALDLLDSRKTDEAKALCMAVLSRNPTLVFANHARGLVAM 69 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-TVGKLKRALRLE----EINKESVE 326 + K AE L K + + PE A ++L + ++ A+ L I+++ Sbjct: 70 HEGKFADAEAYLRKAIEAD--PENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRA 127 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 S + ++ E + + A A+K P Sbjct: 128 SRIGLANALHEKNDPEASVAYFEDAVKREPNA 159 >gi|182412312|ref|YP_001817378.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177839526|gb|ACB73778.1| TPR repeat-containing protein [Opitutus terrae PB90-1] Length = 485 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 85/307 (27%), Gaps = 26/307 (8%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF- 162 + Y + ++ L +I ++ A EKLE ++ T Y L Sbjct: 155 KAAAEYAEVRKIRPDDRYALLGLARIDYDASRWEQAREKLEALVA--QTNFELGYDLIVS 212 Query: 163 --ESCRIGDLNSAQRYATKALDIS--PDAPWVTEAVVQQY------------VLAKEWSR 206 E + + R A KA P PWV E + + Y + + Sbjct: 213 VYEKLGQHERAESIRGAAKAFGTYRDPPDPWVDELMAECYDPYRLSLTAGVLARSGGQDK 272 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ L + + A +R + + G+ A +L Sbjct: 273 ALQLLERAVELAPADISSR----FQLGNLHVEMGNFSAGREALETCTRLAPEFSDGWARL 328 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSENTVGKLKRALRLEEINKE 323 + + AE L + P P + + + T + + + Sbjct: 329 SALQAQLGEMSAAERTLATGLQNCPQSPALHLMRARNLRQAGRTDEAINEYMISIRLRPN 388 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 E + + + G ++ + A+ P + L + + + W Sbjct: 389 EPEPYMELGNTLIAAGREEEGVEQIRAALVAEPADPMALSVLAFRAIQLRDEAEAQQWMT 448 Query: 384 SALHAMP 390 + Sbjct: 449 RVENQPR 455 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 45/155 (29%), Gaps = 34/155 (21%) Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G++ + L + I A + A + ++ KA A Y Sbjct: 117 GEVDRALTLWRRVEALAPDYIPARLRIADCELKADRPTKA----------------AAEY 160 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + +I + +L+ +++I + +QA K + + Sbjct: 161 AEVR---------------KIRPDDRYALLGLARIDYDASRWEQAREKLEALVAQTNFEL 205 Query: 360 IFLLLAQIEQ--ANSHNTDKILYWTQSALHAMPDP 392 + L+ + + + I A DP Sbjct: 206 GYDLIVSVYEKLGQHERAESIRG-AAKAFGTYRDP 239 >gi|320109109|ref|YP_004184699.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis SP1PR4] gi|319927630|gb|ADV84705.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus saanensis SP1PR4] Length = 620 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 72/207 (34%), Gaps = 11/207 (5%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ + L+ Y+L F GDL+ A +A + P ++ Sbjct: 415 DWDSPVSLYQSSLEATPRSSVLWYNLGFSLRERGDLDKAIESYREAARLRPKYQRAFASI 474 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + YV + AI + + ++ ++ G + +++ Sbjct: 475 GEIYVQQDRPAAAIKEYEHALQ----LQSSDTKTVVNYAVALEAVGKNQLAEEQFKRAIR 530 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVG 309 N A I + ++++ +A +K NP P ++ ++ ++ Sbjct: 531 QLPNQSAAYIDLGNLYVQEDREDEAIQCFQKAIDNNPDDPLSYFDMGVLFQRKGQDDLA- 589 Query: 310 KLKRALRLEEINKESVESLVIVSKIAL 336 L ++ + + E+L+ +S++ + Sbjct: 590 -LPFYKKVLRLKPDDPETLLYMSQLHV 615 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 29/98 (29%), Gaps = 4/98 (4%) Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W V + +W ++ E ++L ++GD+ + Sbjct: 401 WTAWGVWRVRARVADWDSPVSLYQSSL----EATPRSSVLWYNLGFSLRERGDLDKAIES 456 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 E+ +L A + + Q++ A E Sbjct: 457 YREAARLRPKYQRAFASIGEIYVQQDRPAAAIKEYEHA 494 >gi|218549026|ref|YP_002382817.1| hypothetical protein EFER_1674 [Escherichia fergusonii ATCC 35469] gi|218356567|emb|CAQ89190.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] gi|324113153|gb|EGC07128.1| hypothetical protein ERIG_01571 [Escherichia fergusonii B253] gi|325497446|gb|EGC95305.1| tetratricopeptide repeat protein [Escherichia fergusonii ECD227] Length = 389 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 92/282 (32%), Gaps = 57/282 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL VQ +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 R+G + ++Q Y +W +AI + Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQATSDWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K KE +R A +L+ D+ + + NS SI + ++ Sbjct: 167 LVKLGKEKHRIEIAHFYCELALQLMASDDLDRAMALLKKGAAADKNSARVSIMMGRIFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKE 323 + + KA L+++ + E+ + + ++ L+RA E N Sbjct: 227 KGEFAKAVESLQRV--IAQDKELVSETLEMLQTCYQQLGKNDEWEEFLRRA---VEENTG 281 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 + + ++++ I D A ++ P +F L+ Sbjct: 282 AA-AELMLADILETREGRDTAQVYITRQLQRHPTMRVFHKLM 322 >gi|119472559|ref|ZP_01614607.1| hypothetical protein ATW7_06193 [Alteromonadales bacterium TW-7] gi|119444883|gb|EAW26183.1| hypothetical protein ATW7_06193 [Alteromonadales bacterium TW-7] Length = 545 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 78/227 (34%), Gaps = 42/227 (18%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ------------------------IALAER 134 + L RK ++Y + L+ L Q +A Sbjct: 155 DAALERKDNNYSPILLRLKGDALLRLKRAQEAKDFFKSVLDIQKFAWAKVGLVEALIANN 214 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ +A L+ ML+ TR A+ L ++ AQ + ++A I+P +++ Sbjct: 215 EHILAQRMLKTMLERQETRLVALDLLGRLEIKLNQFELAQDFLSQAATIAPRNISRQKSL 274 Query: 195 VQQYVLAKEWSRAITFLNQKKKNA----KEWNRNRAILLIARSLENAD--KGDMIASYHD 248 ++ ++ + +L QK ++ L AR+ + Sbjct: 275 STVSLINHDYEK--NYLTQKDIANFAKHSIYDHPDIYLNAARAGIDFALTTDQTDQVQRI 332 Query: 249 AIESLKLCDNS---IM-------ASICAAKSLISQNKKRKAEVILEK 285 + ++ K ++ + A+ +++ +KA+ ++E+ Sbjct: 333 SRQTNKYINDLKTQFPNSTNQSQIDVLNARLHYLKDEHQKAKKLIEQ 379 >gi|94970143|ref|YP_592191.1| TPR repeat-containing serine/threonin protein kinase [Candidatus Koribacter versatilis Ellin345] gi|94552193|gb|ABF42117.1| serine/threonine protein kinase with TPR repeats [Candidatus Koribacter versatilis Ellin345] Length = 878 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 95/300 (31%), Gaps = 36/300 (12%) Query: 99 NIPLARKMHS-YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + LA H+ ++ + + L +L Q AL Q+++A ++ + L I AV Sbjct: 558 DQALANLQHAMQLNDRVAAPHVSLAWL---QSAL--GQHDLALQEYQKALAINPRDPEAV 612 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L E R G A+ +A+ + PD A+ YV + + AI + Sbjct: 613 KGLSREYERAGRTADAEAGFKQAILLRPDYWDSYNALGSFYVRQQRYPEAIAQFRRVLDL 672 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA---KSLISQN 274 + + + GD AS +A +L+ + + A + +SQ Sbjct: 673 TPD----NSAAYSNVAGVLLLIGDP-ASQKEAETALRRSLDLSPSYAAYANLGRLYMSQK 727 Query: 275 KKRKAEVILEKI----------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-- 322 + + I K W + + ++ RA + Sbjct: 728 RYAEGVDITRKALSMNDQNYEVWAN------LTVMLQWMHDDVGAADSRAHTFALLKPYV 781 Query: 323 -ESVESLVIVSKIALE---MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 E S +A G A + A+ + P L A + + + Sbjct: 782 VAHPEDANAHSSLATHYAKAGDRTNAMREIDAALGLQPHDSTVLADAAEVYEDFGDRKRA 841 >gi|94967941|ref|YP_589989.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549991|gb|ABF39915.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 748 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 72/275 (26%), Gaps = 43/275 (15%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A + + + R G+ SA KA+ P Sbjct: 50 SAQTFQIASDLTRAAAEYRKGISVALER-VG-----NLKVAKGEFTSALDLLRKAVATDP 103 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR---------------AILLI 230 + + Y A + A T L K+ R R A + Sbjct: 104 ENTDGQIDLSIAYFRAGNYEGARTVLLPLVKSDPGSARGRNLMGKILFMQGDFEGASTEL 163 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMAS--------------ICAAKSLISQNKK 276 +L D+ S A LK + ++ Sbjct: 164 QAALSITPDFDVAYSLALAYLQLKKLPQVTPLVDEMKASMAKSPELYMLLGQAYRQTGYY 223 Query: 277 RKAEVILEKIW---KVNP--HPEIANIYTHLLSENTVGKLKRALRLEEI--NKESVESLV 329 +A + P H + Y L + L RA +E+ N + S Sbjct: 224 DQAVSEFKTALALDAARPRLHNLLGTTYVALGGKQNYE-LARAEFQQELAKNPKDYSSHY 282 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + I LE G +A A A +AP +LL Sbjct: 283 YLGLIELEDGQYAKAEAALKTAHALAPDDPAAMLL 317 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 20/206 (9%) Query: 123 YLLEVQIALA-ERQ----YNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRY 176 LL +A + E+ P + ++ D + A Sbjct: 542 LLLSAGVAFVKSGDIPTGQRLFTRAFEVGKATPEIHL-----IIGQAYAEQSDNDEALAE 596 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +AL+++P P + E+ A Q+ E N + + Sbjct: 597 FKQALELNPKLPDAHFYIGMVRFKRGEFDDAAKEFQQEL----EVNPQSVQAMYQLAYIR 652 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--- 293 + + E +K N+ A K+L+ Q A LE K++P Sbjct: 653 MQQHQAPEASSLLSEVIKQQPNNSDAHYQLGKALLEQGDAGGATRELETSVKLHPTDYAY 712 Query: 294 -EIANIYTHLLSE-NTVGKLKRALRL 317 ++++ Y E ++ L+ +L Sbjct: 713 FQLSHAYARTGREADSKQALEEFEKL 738 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 82/277 (29%), Gaps = 56/277 (20%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY- 158 A + +Y L LL+ + + + ++ M + Sbjct: 479 GLAAFRAQAYADAI-----PPLERLLKKSPSDSNLRESLGLSYY--MTDKFKESAATLRP 531 Query: 159 ---------SLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 L + + GD+ + QR T+A ++ P + + Q Y + Sbjct: 532 IVDTMSNNPGLLLSAGVAFVKSGDIPTGQRLFTRAFEVGKATPEIHLIIGQAYAEQSDND 591 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ Q E N + +G+ + + + L++ S+ A Sbjct: 592 EALAEFKQAL----ELNPKLPDAHFYIGMVRFKRGEFDDAAKEFQQELEVNPQSVQAMYQ 647 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 A + Q++ +A +L ++ K P + Sbjct: 648 LAYIRMQQHQAPEASSLLSEVIKQQP-------------------------------NNS 676 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 ++ + K LE G A + ++K+ P + Sbjct: 677 DAHYQLGKALLEQGDAGGATRELETSVKLHPTDYAYF 713 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 15/146 (10%) Query: 146 MLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDI---SPDAPWVTEAVVQQYVLA 201 M + P +Y L ++ R G + A AL + P + Sbjct: 203 MAKSPE-----LYMLLGQAYRQTGYYDQAVSEFKTALALDAARPRLHNLLGTTYVALGGK 257 Query: 202 KEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + + A Q+ KN K+++ + L + G + + L + Sbjct: 258 QNYELARAEFQQELAKNPKDYSSHY-----YLGLIELEDGQYAKAEAALKTAHALAPDDP 312 Query: 261 MASICAAKSLISQNKKRKAEVILEKI 286 A + + Q A +L ++ Sbjct: 313 AAMLLLGRLYDQQKNWNAAIEVLRQV 338 Score = 37.6 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 12/160 (7%) Query: 118 NEYLVYLLEVQIALAERQ--YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 L LL + Y +A + + L + Y L G A+ Sbjct: 240 RPRLHNLLGTTYVALGGKQNYELARAEFQQELAKNPKDYSSHYYLGLIELEDGQYAKAEA 299 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------WNRNRAI 227 A ++PD P + + Y K W+ AI L Q + + + Sbjct: 300 ALKTAHALAPDDPAAMLLLGRLYDQQKNWNAAIEVLRQVLARSSAQGASPVQLATTHEML 359 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSI--MASIC 265 + + + +A++S ++ A Sbjct: 360 SKAYAGAGQIPESEKELAAANALKSQDASKSATSDPAVAI 399 >gi|187923650|ref|YP_001895292.1| hypothetical protein Bphyt_1658 [Burkholderia phytofirmans PsJN] gi|187714844|gb|ACD16068.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phytofirmans PsJN] Length = 284 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 24/193 (12%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL Q A +L+ P ATR L + GD A + +A+ Sbjct: 99 LLRADALRMTDQPGAAANAYGQLLKTPLATR--GYRGLGLIAGAAGDFARAAQELQQAVQ 156 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P + + + A L + E ++ ++ +L G+ Sbjct: 157 LAPTDATTLSDLGYARLRDGDVDGARVPLMKA----AELDQTNPKIISNVALYLLANGNQ 212 Query: 243 IASYHDAIESLKLCDNSIMASICA---------------AKSLISQNKKRKAEVILEKIW 287 + + KL + + A+IC+ A + + Sbjct: 213 AQAL-AIMNQQKLAPD-VRAAICSDAAKVAAAGRAQTRGAPAQQESGALGTGARTVASAQ 270 Query: 288 KVNPHPEIANIYT 300 + P P + + Sbjct: 271 GIEPAPRLLQRFA 283 >gi|262304957|gb|ACY45071.1| acetylglucosaminyl-transferase [Argulus sp. Arg2] Length = 288 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 34 GQVNEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYTEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + + A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDVQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 13/200 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G +N A+ AL + P + A + + Sbjct: 26 LANALKEKGQVNEAEDCYNTALRLCPSHADSLNNLANIKREQGYTEEATRLYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E+ A + +G + + E++++ A +L + A Sbjct: 86 EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDVQGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + ++NP H +A+I H S N ++ ++ + ++ ++ Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHC 199 Query: 335 ALEMGSID--QAHAKAMLAM 352 + +A K ++A+ Sbjct: 200 LQIVADWTDYEARMKKLVAI 219 >gi|168010329|ref|XP_001757857.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691133|gb|EDQ77497.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1673 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 29/190 (15%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + + A +L + G + +A SP A W Sbjct: 588 YQIAGDMRRAARSYQKAINLDPEDLEAGEALCNLLEKGGQIVLEGAICREASQHSPRAYW 647 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKG-------- 240 + V AK+WS A++ L + + + A+ L + L Sbjct: 648 AWRRLGYIQVQAKQWSEAVSNLQHALRGYSSDGCLWEALGLAYQQLGMLTAALKAYERVV 707 Query: 241 ------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ--NKKRKAE 280 +ASY AI+ + + + ++ A L + + R+ Sbjct: 708 SLGNTSPIFALLQSGIILQSLASYTQAIDIFRNALDKVPGNVVAQCGLAAALLGRARQCT 767 Query: 281 VILEKIWKVN 290 + W Sbjct: 768 SVGALAWAAR 777 >gi|88861267|ref|ZP_01135899.1| putative HemY (Uncharacterized enzyme of heme biosynthesis) [Pseudoalteromonas tunicata D2] gi|88816748|gb|EAR26571.1| putative HemY (Uncharacterized enzyme of heme biosynthesis) [Pseudoalteromonas tunicata D2] Length = 373 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 110/367 (29%), Gaps = 28/367 (7%) Query: 20 IVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKR 79 V V I + N S + LLF + + + + +R Sbjct: 20 WVIGEKGYVLIAFNNWTIEGSIVSFAVMTIIASIGLYLLFKLVWYVWAIYGNTRFRISQR 79 Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 K L GL S ++ L K + + + Y AL Q A Sbjct: 80 TEQKQLANLQDGLWSALNNDHSLVLK--KLANANLPVSWQGISYAFAADAALKSNQSAKA 137 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 LE++ ++P ++ V LY + +A + A PD + Y Sbjct: 138 ---LELLAKVPDEQQNYVAHLY--AQTGEHQLAADLLSVAAQQKKPDVLQ-----LHLYC 187 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL------ 253 L ++ + + + +G + A ++ Sbjct: 188 ---------QLLVAQQDDTALLEVIPKLAKFGDLTDEQWQGVWQVVFKHADNAVIEQRYE 238 Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 +L N + A ++L++ KAE IL K+ K + + + + + K Sbjct: 239 QLARNLKPLAEVAYCRALLNNGVTEKAEAILIKLLKKGHYDTVTASLKNSSRLSLLSLQK 298 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 L + ES L ++ +AL + A + + + A+ A Sbjct: 299 TVQELLKKQPESESLLFCLAYVALAQTDTELASKVFKKVLNEQNAHAHWRIAARCFAAQG 358 Query: 373 HNTDKIL 379 + + Sbjct: 359 LEHEALQ 365 >gi|301059207|ref|ZP_07200145.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300446697|gb|EFK10524.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 578 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 77/240 (32%), Gaps = 25/240 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPA-----TR-EFAVYSLYFESCRIGDLNSAQR 175 L +AL + ++ A LE + P T+ + L A Sbjct: 52 NFLLASVALNQGRFRDARVHLEQAIRNDPDSVYLNTKMAILLKGLKK-------YPEALA 104 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 YA K++++ P + Y L + AI K R R +L+ + Sbjct: 105 YAQKSVNMDPQNTRTLTLLGDLYALTGKDELAIAEYQNILKQDPGNKRVRLLLITILVRQ 164 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--P 293 + + I K I+A + + + AE L + K N P Sbjct: 165 KQFE-KSLVQLDTLI---KQDPELIIAYYYKGRINLETGNYKAAEKALNEALKRNQTLEP 220 Query: 294 EI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + A +Y ++E RL + +++ + + ++ L + A + L Sbjct: 221 ALFDKATLYQ--ITERDKEAAGAYERLLSLYPDNIPARERLVEVYLNLDQKKDAAHQVEL 278 >gi|126726744|ref|ZP_01742584.1| probable tpr domain protein [Rhodobacterales bacterium HTCC2150] gi|126704073|gb|EBA03166.1| probable tpr domain protein [Rhodobacterales bacterium HTCC2150] Length = 556 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 13/197 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 ++G+ + +AL+ P+ P + + AI F + A + + Sbjct: 63 QMGEKEAGHTMMREALEKDPEDPIQLCDIGTFLAQDGKIEDAIPFFRTATEVAPNYGIAQ 122 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + L A +E + ++ +L + A + + + N KA IL K Sbjct: 123 SNLGGALVIEK----KYGEAIKHLEKACELEPGLMDAHTNLSTAYMQTNNFGKAVDILFK 178 Query: 286 IWKVNP-----HPEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 ++P H ++ A +Y E+ +RA+ L ++ E+ + + G Sbjct: 179 ALSIDPQSIGGHIQLSAALYRKERYESAEHHARRAIELA---PQAAEAYLHLGNALASAG 235 Query: 340 SIDQAHAKAMLAMKIAP 356 I++A A + P Sbjct: 236 KIEEAAAALLPIAGRPP 252 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 57/162 (35%), Gaps = 22/162 (13%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A ++ KA ++ P + Y+ + +A+ L + + + + ++ Sbjct: 138 AIKHLEKACELEPGLMDAHTNLSTAYMQTNNFGKAVDILFKAL--SIDPQSIGGHIQLSA 195 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +L K ++ H A +++L AA++ + + +E+ Sbjct: 196 AL--YRKERYESAEHHARRAIELAPQ-------AAEAYLHLGNALASAGKIEEA------ 240 Query: 293 PEIANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVS 332 A + VG L R + L + +S E ++ + Sbjct: 241 ---AAALLPIAGRPPVGIPALSRLIHLRKTKADSPEMEILTA 279 >gi|124021994|ref|YP_001016301.1| hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT 9303] gi|123962280|gb|ABM77036.1| Hypothetical protein P9303_02811 [Prochlorococcus marinus str. MIT 9303] Length = 837 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 29/271 (10%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 K + ++ + L+Y + + A+ A + L ES Sbjct: 7 KSEAGKQKKINNEKKGLLYFNKAVKSHAQGDIQQAKLLYLKSIAN---------GLENES 57 Query: 165 C---------RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 GD + R AL I+P + + + E++ A+ N+ Sbjct: 58 LYTNLGVIYKNEGDFKESGRCYRSALRINPFSCDAYTNLSSLAIAENEFTSALDLANKAI 117 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + + + + GD+ + ++SL+L ++ A + + Sbjct: 118 KLNPNCD----VANLNAGKALLELGDLEQALASTLKSLELQPDNHTAHMNLGSIYQDLGE 173 Query: 276 KRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +A K ++ P +P+ + IY L + L EI ++ + + Sbjct: 174 LDQALASTIKYLELKPDNPDALMNLGGIYKDL-GQLDQALASTLKNL-EIKPDNPTAHMN 231 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + I ++G++DQA + ++++ P Sbjct: 232 LGVIYKDLGNLDQALTSTLKSLELQPDNHTA 262 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 30/295 (10%) Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYN 137 N KG + S A +I A+ ++ NE L L I E + Sbjct: 17 NNEKKGLLYFNKAVKSHAQGDIQQAKLLYLKSIAN-GLENESLYTNL--GVIYKNEGDFK 73 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEA 193 + L+I A +L + + SA A KA+ ++P+ +A Sbjct: 74 ESGRCYRSALRINPFSCDAYTNLSSLAIAENEFTSALDLANKAIKLNPNCDVANLNAGKA 133 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ + +A+ + + + + L D G++ + I+ L Sbjct: 134 LLEL----GDLEQALASTLKSLELQPDNHTAHMNLGSIY----QDLGELDQALASTIKYL 185 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308 +L ++ A + + +A K ++ P H + IY L + + Sbjct: 186 ELKPDNPDALMNLGGIYKDLGQLDQALASTLKNLEIKPDNPTAHMNLGVIYKDLGNLDQA 245 Query: 309 --GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM---KIAPRK 358 LK + ++ + + + I ++G++DQA + ++ + P Sbjct: 246 LTSTLKSLE----LQPDNHTAHMNLGSIYQDLGNLDQALTSTLKSLELKRDNPDA 296 >gi|159045925|ref|YP_001534719.1| tetratricopeptide [Dinoroseobacter shibae DFL 12] gi|157913685|gb|ABV95118.1| tetratricopeptide [Dinoroseobacter shibae DFL 12] Length = 811 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 91/291 (31%), Gaps = 14/291 (4%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 KM + V + + + Q+ LA A + +E L T A+ Sbjct: 330 KMQAIVDAANESSDTNRFKVALAQMLLATGNEVGARQLVEETLVEDPTNVDAIKMQASWL 389 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + A ALD +PD P + + ++ + A L+ + + Sbjct: 390 IDRDETERAISLLRTALDQTPDDPQLMTLIANAHMRNGDRELARDLLSLAVETSSYAPEE 449 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + + + + + +L+ ++ + A+ + +AE + E Sbjct: 450 S----LRYARLLVSTEEFLTAEDVLVNALRRAPSNTQLLLALAEVYLQLEDWARAEHV-E 504 Query: 285 KIWKVNPHPEIANIYTHLL------SENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + P + + + L L + + +L + L Sbjct: 505 TTLRGLDQPGVREAADSIRVAILNGQQRQGEALDLLSNLATQDGGNFTALTATVQSLLNA 564 Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388 G ++A A A+ P ++ +L A ++ + + AL A Sbjct: 565 GEAERARAMVDEALAQDPDSFQVLVLDAALKNSVGDFEGAAKSY--RALSA 613 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 71/256 (27%), Gaps = 26/256 (10%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR- 153 + A AR M Q + + V +L+ + + + A + + Sbjct: 562 LNAGEAERARAMVDEALAQD--PDSFQVLVLDAALKNSVGDFEGAAKSYRALSARQEAGE 619 Query: 154 ---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 V +L R G+ +A + + W + ++ A + AI Sbjct: 620 RIWLELVRTLNRL-QRPGEARAALAEGLERFPQGANLLWAQASTLE---QAGDIDGAIEI 675 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKS 269 + + + L S D+ + +Y A +L A Sbjct: 676 YERLYEQSSGSIVVSNNLASLLSTHRTDEASIERAYRIAR---RLRGTENPAFQDTYGWL 732 Query: 270 LISQNKKRKAEVILE-------KIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEIN 321 + +A LE V H +A Y +E+ + + L + Sbjct: 733 AYLRGDYAEAVEYLEPAAAALSSDALVQYH--LAMAYLAAERTEDAAEQFR--KSLALVG 788 Query: 322 KESVESLVIVSKIALE 337 + ++ L Sbjct: 789 PDETRPQFATAREELN 804 >gi|284054256|ref|ZP_06384466.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca] Length = 228 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 16/176 (9%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+S + + ++Q H +L Q A + +L+ Sbjct: 23 LISQGQGQVRDVVEPLQRLAQLH--PETPEYGILLAQAQEYTGDPEAAAQSYRRILEQRP 80 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLA 201 A+ L +A L +P + Y Sbjct: 81 GEVQALQGLVSLLISQDRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQ 140 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + AI ++ KN++ R ++A+++ +G+ + E++ L Sbjct: 141 QRYQEAIAVYDEAIKNSESDFRP----VLAKAIILRQQGNPDDAELLFAEAIDLAP 192 >gi|149607993|ref|XP_001521471.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 801 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 97 SGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDR 156 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + S A++ L + + R+R L D A+ Sbjct: 157 PDVLEQRAEILSPLGRVSEALSDLTKAIQLQPSARLYRHRGTLHFISE-------DYAAA 209 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYT 300 + D +SL L N +A + + + ++A ++ K ++ + + Y Sbjct: 210 HEDFQQSLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYR 269 Query: 301 HLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + E +RAL L N V++L + + GS+ +A +++ P E Sbjct: 270 ELGNFEAATESFQRALLL---NHNHVQTLQLRGVMLYHHGSLQEALKSFKRCLQLEPYNE 326 Query: 360 IFLLL 364 + + Sbjct: 327 VCQHM 331 >gi|116075659|ref|ZP_01472918.1| TPR repeat [Synechococcus sp. RS9916] gi|116066974|gb|EAU72729.1| TPR repeat [Synechococcus sp. RS9916] Length = 734 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 93/285 (32%), Gaps = 39/285 (13%) Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124 F+ + M R + +++Y L++ +N + + + Q F L+ L Sbjct: 32 FIKEEEAVALMDQGRLQEA--ESIYRELIAAGTNNHIVYGNLAALCGMQGRFS--ELIKL 87 Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L + + Y AH Y+L GDL +A KAL + Sbjct: 88 LR-RTLEIKPNYPEAH-----------------YNLGLALKEQGDLTAAIASYNKALQLR 129 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGD 241 P+ P + Y + + AI N + N E + N ++L +GD Sbjct: 130 PNYPEAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNNLGVVL-------KKQGD 182 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A+ ++L+L N A + Q A K ++ P A+ Y + Sbjct: 183 PTAAITSYHQALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLK--PNDADTYNN 240 Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 L + + + ++ ++ + L G Sbjct: 241 LGNALKEQGDLTAAIDSFNKALQLKPNFPDAQWNSALTMLLGGDY 285 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 11/165 (6%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + +S I L + + + A + +L+ ++GD+ A+ ++L+L Sbjct: 74 LCGMQGRFSELIKLLRRTLEIKPNYP--EAHYNLGLALK--EQGDLTAAIASYNKALQLR 129 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKL 311 N A + Q A ++NP H + + + + Sbjct: 130 PNYPEAHNNLGNAYKDQGDLTAAIASYNSALQLNPNDPETHNNLGVVLK--KQGDPTAAI 187 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ E+ + E G + A A A+++ P Sbjct: 188 TSYHQALQLQPNYPEAHYNLGIAFKEQGDLTAAIASYNKALQLKP 232 >gi|222053755|ref|YP_002536117.1| glycosyl transferase family 2 [Geobacter sp. FRC-32] gi|221563044|gb|ACM19016.1| glycosyl transferase family 2 [Geobacter sp. FRC-32] Length = 3011 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 92/276 (33%), Gaps = 24/276 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQI 149 G++ A +Q + + L + A + +L + Sbjct: 1142 GVLYSNLGETEKALAHFEQATQLEPTNATFQKNL--ADFYQVVLGRTEDALQIYVKLLAM 1199 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + L +G + A+ + T+AL+I P + +++ A+ Sbjct: 1200 HPKDLEVLAGLGKICVSVGKHDDARHFFTRALEIEPWNLEIRKSL-----------EALE 1248 Query: 210 FLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 ++ ++ ++++ A + + L+ +A Sbjct: 1249 EFRRQPEQIGPAATVEEMY---GKAVDLAGRNLTAEAIAALENLLQHFPQFALAHNDLGV 1305 Query: 269 SLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKE 323 Q ++ +A E+ ++ P +A+ Y H++ T L+ ++L + + Sbjct: 1306 LYGQQGQQDQAVAHHEEAARLEPGNGTFLKNLADFY-HMVMGRTEQALQIYVKLLAVQPK 1364 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 +E L+ + + + +G +D AM+I P Sbjct: 1365 DLEVLMALGNLCVAIGKLDDGECFFTRAMEIEPWNR 1400 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 55/164 (33%), Gaps = 7/164 (4%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + L +W +K + L +++ A+ G + + ++ Sbjct: 2800 LDKEKLRGKWEFYYQLGKKKLAE----HPRDVQALTELAIQAAELGKHDEALELWGQVVE 2855 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKL 311 +S A + + Q + +A ++ ++PH + A L S V Sbjct: 2856 QEPDSANAHFNMGHAYLCQGRYGEALCSSKRAVALDPHAKEAVFNYGCCELYSGEIVSVA 2915 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L + + ++ +++ I +G D+ + ++ Sbjct: 2916 TLLENLLVNHPDYPPAIALLASIHFCLGEQDKGRQRLQQVREMN 2959 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 26/213 (12%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE----------------WS-RAITF 210 G A + K L + P V A+ V + W+ Sbjct: 1346 GRTEQALQIYVKLLAVQPKDLEVLMALGNLCVAIGKLDDGECFFTRAMEIEPWNREVRES 1405 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC--DNSIMASICAAK 268 L K+ + + + A + A D + A+E L LC N A Sbjct: 1406 LAAVKEYRETAQADMGVAESAYAEIQALPEDQVEQKIAALEKL-LCRHPNFATAHNDLGV 1464 Query: 269 SLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 +Q KA E+ ++ P +A+ Y H++ T L+ ++L + + Sbjct: 1465 LYTNQGAMEKALEHQEEATRLEPTNAVFQKNLADFY-HIVLGRTEEALQIYVKLLAVKPK 1523 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +E L + + L + +D A A+++ P Sbjct: 1524 DLEVLTALGNLCLSLDRLDDAACFFTRALEVEP 1556 Score = 37.2 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 31/198 (15%) Query: 127 VQI-------ALAERQYNIAHEKL-EMMLQIPA-----TREFAVYSLYFESCRIGDLNSA 173 Q A + A E M P T + + + G+ A Sbjct: 2453 AQALNLKGVLAFRAGDRSRAEELFTSAMAADPGFGEACTNLGVLR---WSAQAHGE---A 2506 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 K ++P E ++++SR ++ + +R LI Sbjct: 2507 LELLEKGFMLNPTVSDAMERYHSAISASEQFSRGEAVF-REARAIFPHSRLITFKLIDLL 2565 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-------ILEKI 286 L + +A A+ D I A++ K+L Q ++ +A ++ K Sbjct: 2566 LNQQKYEEAMAEIEQAMVGFGADDGIIDAALHVRKTLDGQKERPQAGAPGSISLCMIAK- 2624 Query: 287 WKVNPHPEIANIYTHLLS 304 PH +A + Sbjct: 2625 -DEAPH--LARALASVKP 2639 >gi|119357636|ref|YP_912280.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] Length = 3560 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 44/169 (26%), Gaps = 4/169 (2%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 NE V L E + + A +L A+ + + D A Sbjct: 2901 NEESVKLQRALKLHQEGRLDEAEALYREILSSSPEHFDALRLSATIAAQRHDSEKALALF 2960 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +AL I PD K + A+ + ++ A R Sbjct: 2961 DQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIVLKPDY----ADAYSNRGNTLM 3016 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + ++ L + A +L + ++ EK Sbjct: 3017 KMNQYKEALESYERAIALKPENADACFHQGNALQELKRYNESLASYEKA 3065 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 58/208 (27%), Gaps = 38/208 (18%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 E V L E + + A + +L I A+ L + R A Sbjct: 2222 KEESVKLQRALKLHQEGRLDEAEVIYQEILSIQPLHIEALQFLASMATRRKKYTDAVSLF 2281 Query: 178 TKALDISPDAPWVTEAV---------------------------VQQYVLAK-------E 203 +AL+I PD P + V+ Y Sbjct: 2282 ERALEIDPDHPVSWCTLGIALHELGRYEEALASYEKAIVLYPGFVEVYSNRGNTFLILKR 2341 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + A++ + E+ R R + + D + L + I+A Sbjct: 2342 YQEALSSYEKALAINPEYTR----AYFNRGSALLELKRYEEALADYDKVTALKPDYIVAY 2397 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291 I A L + R+A EK + P Sbjct: 2398 INCAVVLQELKRYREAIGSYEKALALKP 2425 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 60/209 (28%), Gaps = 19/209 (9%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 E V L E + + A +L A+ + + D A Sbjct: 1474 KEESVKLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQLSATIAAQRHDSEKALVLF 1533 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR 232 +AL I PD K + A+ + ++ NR + + R Sbjct: 1534 DQALAIKPDHARSLNNRGIALQELKRYDEALESYERAIAVKPDFIEPYSNRGNTLQELKR 1593 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 E D + E ++++ N KR E +L + Sbjct: 1594 YEEALACYDSAIALKPENEQFYYH-----------RAVVLHNMKRYEEALLNYDHVLALK 1642 Query: 293 PEIANIYTHLLSENTVGKLKRA-LRLEEI 320 P+ A Y++ N + LKR L Sbjct: 1643 PDCAEAYSN--RGNILTGLKRYEEALASY 1669 >gi|87307492|ref|ZP_01089636.1| TPR domain protein [Blastopirellula marina DSM 3645] gi|87289662|gb|EAQ81552.1| TPR domain protein [Blastopirellula marina DSM 3645] Length = 1429 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 96/282 (34%), Gaps = 59/282 (20%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E+ +G+L A + ++ LD++P+ E + + V + W+ A + L Q + + Sbjct: 44 EAKEMGNLPEAIDHLSRYLDVAPENTEAMEQLGELLVQTRRWNEAFSVLEQTLRREPDRV 103 Query: 223 RNRAILL--------IARSLENADKGDMIASYHD---------------AIESLKLCDNS 259 +R L + + E ++ ++ + C+++ Sbjct: 104 ESRLRLAEVSLALGRFSDAKEQLEQIIASSAADAETYLLLAACHSANGQWRSAADACEDA 163 Query: 260 I-----------------------MASICAAKSLISQNKKRKAEV-ILEKIWKVNPHPEI 295 I A+ A + AE +L W++ Sbjct: 164 IKKDSANIAAYQQLAALQRSRLDDPAASEATIDQVVSANPTNAEAWVLRGAWRLQYRDSA 223 Query: 296 ANIYTHLLSENTVGKLKRALRLEE----------INKESVESLVIVSKIALEMGSIDQAH 345 A S+ ++ L + ++ + +++ + + I L A Sbjct: 224 ATQSAIAKSQEVSPRVGSIEVLSQASDDAEKAIQLDPMNADAVRLAASILLVEKDYAAAR 283 Query: 346 AKAMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSAL 386 A A++IAP ++L AQIE A + ++ +W + + Sbjct: 284 KLADKAIEIAPEASASYVLRAQIEAAAENP-ERASHWLKKGI 324 >gi|324111859|gb|EGC05839.1| cellulose synthase operon protein C [Escherichia fergusonii B253] Length = 1157 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 14/255 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ I L+ ++ + + + L ++ ++G Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ +A+ ++ + + P+ PE Y Sbjct: 477 WGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536 Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351 LS + + L L + N E + + V + A + + + Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAML 596 Query: 352 MKIAPRKEIFLLLAQ 366 + P I L LA Sbjct: 597 RQQPPSSRIDLTLAD 611 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 >gi|285803495|pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803496|pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803497|pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803498|pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) gi|285803499|pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its Peptide- Ligand (Hsp90 Peptide) Length = 125 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + Y A E + L++ A Y+L + GD A Y KAL++ P+ Sbjct: 18 AYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNA 77 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y ++ +AI + Sbjct: 78 KAWYRRGNAYYKQGDYQKAIEDYQKAL 104 >gi|256843087|ref|ZP_05548575.1| TPR repeat-containing protein [Lactobacillus crispatus 125-2-CHN] gi|256614507|gb|EEU19708.1| TPR repeat-containing protein [Lactobacillus crispatus 125-2-CHN] Length = 415 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 21/230 (9%) Query: 146 MLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + +P + + SL ++ G + +A+ +AL ++P+ + + + L+ Sbjct: 89 LYNVPESSSAYLDSLLVQADYYQTNGLIETAKDKLIRALQLAPEEDAIKFGLAEIEYLSG 148 Query: 203 EWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + +A+ L +++ E N + + L N ++ + A L + Sbjct: 149 NYEQALELYQDLIKRQSTFSEVNLYQRLFATFAKLGNYEEAAEVI-REHANSILDIDSK- 206 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314 A L+S ++A L+++ + +P +P +A Y H + L+ A Sbjct: 207 ----YEAGLVLLSVGDDKQAIKFLDEVIEQSPDYVNAYPLLAQAYDH--QHDNEQVLRTA 260 Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 N E E+L + ++ A + +D A +K+AP + Sbjct: 261 QAGLAYN-ELDETLYSMGARAAANLNELDTARDLLEKGLKVAPDNSDLRM 309 >gi|225851488|ref|YP_002731722.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] gi|225645952|gb|ACO04138.1| tetratricopeptide repeat domain protein [Persephonella marina EX-H1] Length = 934 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 66/200 (33%), Gaps = 12/200 (6%) Query: 91 GLMSIAAHNIPLARK-MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G + + + A K + Y+ L +I + + A ++ + Sbjct: 714 GYLKYISGDKDQAVKILTRYIKIYPRGEFNVQAKELLAKIFEEQGDLDKAIAVMKKLPAT 773 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-PWVTEAVVQQYVLAKEWSRAI 208 + L + G A+ Y + P + + + + A+ Sbjct: 774 DENKFK----LAMLLYKAGRYTEAKSYFEEIYTRFPKYRADIAFYLGKIQFENGYFQNAL 829 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-- 266 +L + ++ N + LI E + D+ + + I + L ++ I A Sbjct: 830 RYLEEALNSSDYNNVAESYYLIGLIYEKLE--DIENALNSFINVIYLYPDATEQVIKARL 887 Query: 267 --AKSLISQNKKRKAEVILE 284 A+ + Q ++ +A IL+ Sbjct: 888 KVAEIMKKQGRRSEASCILK 907 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 126/368 (34%), Gaps = 66/368 (17%) Query: 75 MLHKRNYDKGYKALYTGLM----SIAAHNIPLARKMHSYVS------------------- 111 KRNY K Y+A M + A ++ A + Sbjct: 485 FFKKRNYQKAYEAFTDEYMKAVSAFNAGDLDKAYSLVKGKKDRKSRFLLAYIFMRKGDID 544 Query: 112 ------QQHTFHNEYLVYL---LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 ++ + ++ + L +E +Y A + + E ++ Sbjct: 545 KARDILRELSKGDDKIAQQAGYLYAYSYFSEGKYIEAIKAFRDYAEKYRGTELGNLAVLR 604 Query: 163 ES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + G A++ + ++ + P +A Q VL E S A +Q +K + Sbjct: 605 MADSYYNAGQKEKARKIYQQFIEEHANTPEAIDAAYQLTVLEMEESGA-DVASQIEKFIE 663 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK-SLISQNKKRK 278 ++ + + L+ L GD+ + ++ K+ I A I ++ +L + Sbjct: 664 KYPQYPFVSLLKLQL-----GDLYTEKQEYDKAEKIYRELIEADIKESEYALYKLGYLKY 718 Query: 279 -------AEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEINKE 323 A IL + K+ P E +A I+ G L +A+ + + Sbjct: 719 ISGDKDQAVKILTRYIKIYPRGEFNVQAKELLAKIF------EEQGDLDKAIAVMKKLPA 772 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYW 381 + E+ ++ + + G +A + P R +I L +I+ N + + + Y Sbjct: 773 TDENKFKLAMLLYKAGRYTEAKSYFEEIYTRFPKYRADIAFYLGKIQFENGYFQNALRY- 831 Query: 382 TQSALHAM 389 + AL++ Sbjct: 832 LEEALNSS 839 >gi|167585808|ref|ZP_02378196.1| HemY domain protein [Burkholderia ubonensis Bu] Length = 395 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 51/403 (12%), Positives = 121/403 (30%), Gaps = 33/403 (8%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V + + S + + + L Sbjct: 3 LRGIVWLAVLFAIAAALATVGRFDTGQVLLVYPPYRVDLSLNLFVVGIVVLFIVVYALMR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARARNEKAQASLRDAIANLYAGRFSRAEKAARDALSIDANQGAA 122 Query: 121 LVYLLEVQ-------------IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI 167 + + ++ A ++ A + E Sbjct: 123 SLVAATAAHRMHEYARRDDWLSKVGAPEWQDARLLAAADMRADARDADGALAALAEMQAG 182 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G AQ+ A +A + W + ++A+ A R +A Sbjct: 183 GKRIHAQQVALRAQQQLKN--WAEVLKL---------AKALEKREALHPAAAVRLRQQAA 231 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + R + D ++ + + + + AA L+S ++ +A I+E Sbjct: 232 ENLLRERRH-DPDALLEVWQSLSTAERQSPRL---ADLAADLLVSLERRPEARRIVEDAL 287 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 N + Y + + +++A ++ + + + L + ++ + +A + Sbjct: 288 AHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPDDADLLFALGRLCQQQQLWGKAQSF 347 Query: 348 AMLAMKIAP----RKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 A+K+A R LA++ + ++ +SAL Sbjct: 348 LESALKLADNEALRVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|301631945|ref|XP_002945052.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 5-like [Xenopus (Silurana) tropicalis] Length = 462 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 35/201 (17%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220 A+ +A+ +PD P + +E+ + L + K Sbjct: 166 YERAKGCFEEAVKGNPDDPEWNTGLATVVCRLEEFRGRNCPAFKSVSFQLLERAVKLNP- 224 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +++ + +L+ + + +++L+L + AK K +A Sbjct: 225 ---KDSVIKVLLALKLQELKRQEEAMKHIMDALELTPDLPYVLRYVAKFYRRAGKFEEAI 281 Query: 281 VILEKIWKVNP-----HPEIANIYTHL------------LSENTVGKLKRALRLEEINKE 323 +L K + P H ++ Y + ++T L E Sbjct: 282 RVLTKALSMTPNSGFLHHQLGLCYRQMIIQRKGTGNGNCRGQDTQE----IKDLTEKAIF 337 Query: 324 SVESLVIVSKIALEMGSIDQA 344 E +V + K L D A Sbjct: 338 HFEKVVELKKTFLHAH-FDLA 357 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 18/145 (12%) Query: 160 LYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + A ++ AL+++PD P+V V + Y A ++ AI L + Sbjct: 232 LLALKLQELKRQEEAMKHIMDALELTPDLPYVLRYVAKFYRRAGKFEEAIRVLTKALSMT 291 Query: 219 KEWN-RNRAILLIARSLENADKG---------DMIASYHDAIES-------LKLCDNSIM 261 + + L R + KG D ++ ++L + Sbjct: 292 PNSGFLHHQLGLCYRQMIIQRKGTGNGNCRGQDTQEIKDLTEKAIFHFEKVVELKKTFLH 351 Query: 262 ASICAAKSLISQNKKRKAEVILEKI 286 A A + N+ +KAE +K Sbjct: 352 AHFDLADMYVRSNQYQKAEETYKKA 376 >gi|16329708|ref|NP_440436.1| hypothetical protein slr2048 [Synechocystis sp. PCC 6803] gi|1652192|dbj|BAA17116.1| slr2048 [Synechocystis sp. PCC 6803] Length = 398 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 63/226 (27%), Gaps = 43/226 (19%) Query: 133 ERQYNIAHEKL---EMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAP 188 + YN + + + + + + + +AL + P+ Sbjct: 192 QGDYNRVRQLYNEIHSLQSDNEEAAV----MMGAALLQSSEYEQLITFNNQALRLFPNRS 247 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +T + + Y+ + A L + +W L A LE +G+ + Sbjct: 248 ELTLQLGKAYLAQGDLVAARRALEPRL--NPDWRSFSLYLTWAELLE--REGNFAGALDA 303 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ++L+ +I A I + + + E +W Sbjct: 304 YKQALRNEPTAIAAKIGTGRMYLELDNPA------EAVWV-------------------- 337 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L + + + ++ + ID A A K+ Sbjct: 338 -----FRDLTRLQPSNADFYYLLGEAYAVDEKIDLAKKSFGEAKKL 378 >gi|148264943|ref|YP_001231649.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146398443|gb|ABQ27076.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 265 Score = 48.0 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 71/222 (31%), Gaps = 12/222 (5%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 GY L L + A K + + E L L + ++ A Sbjct: 41 GYFCLGEAL--AESGKQDEAIKTITAGLELAPDDVEALTAL--GDLYFEGGRHKDAIACY 96 Query: 144 EMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + + + L + S D AQ+ AL++ P + A+ Y Sbjct: 97 KKVTDLRPKEADGYVSIGLVYNSLERVDD--AQKAFNSALEVDPHNVFALNALGDLYYGL 154 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A+ + E + + A D GD+ A+ + +E+++L N M Sbjct: 155 GKNDEAV----AAYRKGIEIDPDDATAYFNLGDLYYDLGDLDAAEKETLEAIRLDPNFTM 210 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + + I Q + A E K P+ A + + Sbjct: 211 SYLTLGNVCIDQERLTDAVKYFELYLKKEKSPQAAEMIAEVK 252 Score = 43.4 bits (101), Expect = 0.098, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 91/265 (34%), Gaps = 17/265 (6%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L E L +Y A + ++I + L G + A + T L+ Sbjct: 8 RLAEGISLLETGEYGKAATEFSACIEIEPDNPEGYFCLGEALAESGKQDEAIKTITAGLE 67 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241 ++PD A+ Y AI + KE + +I L+ SLE D D Sbjct: 68 LAPDDVEALTALGDLYFEGGRHKDAIACYKKVTDLRPKEADGYVSIGLVYNSLERVD--D 125 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IA 296 +++ A+E + +++ A K +A K +++P + Sbjct: 126 AQKAFNSALE---VDPHNVFALNALGDLYYGLGKNDEAVAAYRKGIEIDPDDATAYFNLG 182 Query: 297 NIYTHLLSENTVGKLKRALRLEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++Y L + K LE I S + + + ++ + A L +K Sbjct: 183 DLYYDLGDLDAAEK----ETLEAIRLDPNFTMSYLTLGNVCIDQERLTDAVKYFELYLKK 238 Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379 + ++A+++ +++ Sbjct: 239 EKSPQAAEMIAEVKAVVEGLKEEMR 263 >gi|254293095|ref|YP_003059118.1| hypothetical protein Hbal_0727 [Hirschia baltica ATCC 49814] gi|254041626|gb|ACT58421.1| TPR repeat-containing protein [Hirschia baltica ATCC 49814] Length = 660 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 105/297 (35%), Gaps = 20/297 (6%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQ 174 + L + A+ Q+ A +LE +L P +A +LY + + AQ Sbjct: 5 QQAAEQLKRAKAAMYANQFAQACIELEPLLDNPE---YAQEALYMHAVCGRYQNKFDVAQ 61 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + K L I+P+ + + + A+ + +N ++ Sbjct: 62 SFLDKLLAIAPEFGRAHQEAGYLALAQGQKEIALKQFIAACR----FNPALTASWEKQAG 117 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292 + G + + ++ +L S + AA + +++ K KAE + K +P Sbjct: 118 LLRETGQKEQAINAQAQADRLKSLSKP--LYAATNFLAEGKLLKAEDLCRIHLKSSPKDV 175 Query: 293 ---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +A+I + L L + E ++++ + +I + +A +A Sbjct: 176 EAMRLLADIGSRLGVLEDAEIL--LEKAVEFEPDNIQLRLDYIQILRKRQKFSRALEEAK 233 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPLWISDDGYLSSVW 405 + P IF IE+ + + + + + L DP ++ G+ W Sbjct: 234 RLYDLDPENAIFRSHYAIEKMQTGDYEGAVELMDAVLETLPHDPATLTSRGHALKTW 290 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 37/261 (14%) Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG--------LMSI--------------- 95 F V++ FL + + + + GY AL G ++ Sbjct: 57 FDVAQSFLDKLLAIAPEFGRAHQEAGYLALAQGQKEIALKQFIAACRFNPALTASWEKQA 116 Query: 96 ----AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 A + + + L LAE + A + + L+ Sbjct: 117 GLLRETGQKEQAINAQAQADRLKSLSKP----LYAATNFLAEGKLLKAEDLCRIHLKSSP 172 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ L R+G L A+ KA++ PD + +Q +++SRA+ Sbjct: 173 KDVEAMRLLADIGSRLGVLEDAEILLEKAVEFEPDNIQLRLDYIQILRKRQKFSRALEE- 231 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKSL 270 K + + AI ++E GD + ++++ A++ +L Sbjct: 232 ---AKRLYDLDPENAIFRSHYAIEKMQTGDYEGAVEL-MDAVLETLPHDPATLTSRGHAL 287 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 + K+++A + P Sbjct: 288 KTWGKQKEAIASYNAACRARP 308 >gi|311747575|ref|ZP_07721360.1| adenylate/guanylate cyclase [Algoriphagus sp. PR1] gi|126575557|gb|EAZ79867.1| adenylate/guanylate cyclase [Algoriphagus sp. PR1] Length = 597 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 19/201 (9%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNA-KEWNRNRAIL 228 +SA ++ KA+ P + + L ++++A L K + R Sbjct: 251 SSAMKFIQKAVVARPTYAEAHQFLSFFNTLKGDFNKAKEHILYAKSVDPLNPETRFFQAN 310 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + R+ E + ++ + + E + A I + I +N+ ++A+ +++K Sbjct: 311 YLYRTNELDEAIKILNALLEENEKN------LPALIVSTYIHIKENRLKEAKALIKKTPN 364 Query: 289 VNPHPE----IANIYTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKIALEMGSID 342 P+ + + L LK + S + + L G D Sbjct: 365 EVFTPDEKLGLNTLVDVLTGNQDTELLKELEEHAN-DPLAHHAHSYLFIIYANL--GRFD 421 Query: 343 QAHAKAMLAMKIAPRKEIFLL 363 +A A K I LL Sbjct: 422 EAFAVLEKIFKDK--SSILLL 440 >gi|87310163|ref|ZP_01092295.1| probable PKR inhibitor (translation regulation) [Blastopirellula marina DSM 3645] gi|87287153|gb|EAQ79055.1| probable PKR inhibitor (translation regulation) [Blastopirellula marina DSM 3645] Length = 556 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 71/200 (35%), Gaps = 9/200 (4%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A A +AL + + + +L + + A L+ +N E ++ + Sbjct: 102 RDKALADANRALKVDAKLGDMQLLKSRLLMLPDGDKAEAKKALDAAIENLTEDDQQLSKA 161 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++ + + D +++K +++ A + Q KA L+++ + Sbjct: 162 IMMSA---TLEEDPALQIEKLTKAIKTDPDNVDALKLRGVLYMQQENFEKASADLKQVME 218 Query: 289 VNPHPEIA--NIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 NP+ ++A Y L+ + + + S ++ +++ + + A Sbjct: 219 KNPN-DVAVLQAYADTLAGMKKFDEAIALLDKTVAEHPGSPVGYLLRARLKVLAEDSEGA 277 Query: 345 HAKAMLAMKIAPRKEIFLLL 364 + PR L++ Sbjct: 278 IQDLDQVLAFIPRSIPALMM 297 Score = 43.8 bits (102), Expect = 0.069, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+ + + A+K + T ++ L + + L E + + + P Sbjct: 129 LLMLPDGDKAEAKKALDAAIENLTEDDQQLSKAIMMSATLEEDPALQIEKLTKAIKTDPD 188 Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + + + + + A + ++ +P+ V +A K++ AI Sbjct: 189 NVDALKLRGVLY--MQQENFEKASADLKQVMEKNPNDVAVLQAYADTLAGMKKFDEAIAL 246 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L++ + + R+ D + D + L SI A + A+ Sbjct: 247 LDKTVAEHPGSP----VGYLLRARLKVLAEDSEGAIQDLDQVLAFIPRSIPALMMRARLY 302 Query: 271 ISQNKKRKAEVIL 283 I ++ AE L Sbjct: 303 IDLDRPADAEQDL 315 >gi|254510924|ref|ZP_05122991.1| putative TPR/sulfotransferase domain protein [Rhodobacteraceae bacterium KLH11] gi|221534635|gb|EEE37623.1| putative TPR/sulfotransferase domain protein [Rhodobacteraceae bacterium KLH11] Length = 550 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 43/239 (17%) Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + LL+ + A ++ A +K M P R + + + AQ Y Sbjct: 13 SVTDLLKKGRADRAFKRATKAAKKWPKMAAFP--RLAGL-----CAVQQQKPKLAQTYFE 65 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 +A + P P + + V E A+ F+ + R I ++ Sbjct: 66 RAWRMDPANPELIQNYGLSLVQGGESEAALRFIARIAARGPLTPAQRFI----HAMALLR 121 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + + E ++ ++ A A L Q++ A +L Sbjct: 122 EHQGAQALTEIDEVIRHQPTNLEAHCLKADILDEQHRWNDAIDVLVA------------- 168 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L E + + + ++K + +G +D+A A +A ++AP Sbjct: 169 ------------------LVETHPKFHFGQLRLAKSLVGVGRLDEALTHARMAFELAPT 209 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 4/146 (2%) Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A + KG ++ A ++ K A + Q K + A+ E+ W+++ Sbjct: 12 ASVTDLLKKGRADRAFKRATKAAKKWPKMAAFPRLAGLCAVQQQKPKLAQTYFERAWRMD 71 Query: 291 PH-PEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P PE+ Y + + + L+ R+ + I + L QA + Sbjct: 72 PANPELIQNYGLSLVQGGESEAALRFIARIAARGPLTPAQRFIHAMALLREHQGAQALTE 131 Query: 348 AMLAMKIAPR-KEIFLLLAQIEQANS 372 ++ P E L A I Sbjct: 132 IDEVIRHQPTNLEAHCLKADILDEQH 157 >gi|56751461|ref|YP_172162.1| hypothetical protein syc1452_c [Synechococcus elongatus PCC 6301] gi|56686420|dbj|BAD79642.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 788 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 9/197 (4%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 + + + T L + ++AL ++Q A L+ M+ P + Y+L + Sbjct: 342 LEAAATYLATLPRSPARILEQARLALTQQQPKAALALLDSMVM-PEAEQGEHYNLLGVAQ 400 Query: 166 RI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ ++A + L P P + + ++W A+ + Sbjct: 401 TQLGEWDTAIAIYRQGLQAQPHHPKLRTNLCVALRQQEQWEEALALSQALLEEVPAAIDR 460 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ ++ G + + + A + A+ L+ Q K + I E Sbjct: 461 ----LLLQADTLNLAGRYDQALSLYQQVVAREPERANAQLAIAEILLRQGKA-EGWDIYE 515 Query: 285 KIWKVNPHPEIANIYTH 301 + P +A + H Sbjct: 516 ARFAAE--PSLAALAAH 530 >gi|218886558|ref|YP_002435879.1| response regulator receiver protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757512|gb|ACL08411.1| response regulator receiver protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 454 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 20/283 (7%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 ++ +H A K+ + N L+ A + + A E E + Sbjct: 163 ARAMVQQGSHES--ALKVCRKI--LELKPNSAAGLLVMGDAYQALGKMDRARECFEEASR 218 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + L + +IGD + Y K +SP + + +V +A Sbjct: 219 NADLYLEPLKKLADLNKQIGDSEAQLGYLEKLDRLSPLNVERKVDMGEIHVEMGNQEKAE 278 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-- 266 A + R + D + ++L + + Sbjct: 279 ELFELAVTQATREAMAYIGDISERIATIYSERDPERAERFLRKALDAKGDMLDRGDLGTF 338 Query: 267 ---AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGKLKRALRL--E 318 +L Q K R A + +K ++ P+ N+Y ++ +E + R+ L Sbjct: 339 NRLGIALRKQGKWRDATIEYQKALRIA--PDDENLYYNMSMAFAEGKEFRDARSNMLKAM 396 Query: 319 EINKESVESLVIVS----KIALEMGSIDQAHAKAMLAMKIAPR 357 IN + ++ + + G D A +A+++ P Sbjct: 397 AINPDLPRRDKTIAFNMGLVFMRAGGRDYAERCLQVALELDPD 439 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 72/172 (41%), Gaps = 19/172 (11%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-- 290 + +G ++ + L+L NS + + + K +A E+ + Sbjct: 163 ARAMVQQGSHESALKVCRKILELKPNSAAGLLVMGDAYQALGKMDRARECFEEASRNADL 222 Query: 291 ---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P ++A++ + ++ +L +L+ ++ +VE V + +I +EMG+ ++A Sbjct: 223 YLEPLKKLADLNKQI--GDSEAQLGYLEKLDRLSPLNVERKVDMGEIHVEMGNQEKAEEL 280 Query: 348 AMLAMKIAPRKEIFLLLAQI----EQANS----HNTDKILYWTQSALHAMPD 391 LA+ A R+ +A I E+ + + ++ + + AL A D Sbjct: 281 FELAVTQATREA----MAYIGDISERIATIYSERDPERAERFLRKALDAKGD 328 >gi|325107986|ref|YP_004269054.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324968254|gb|ADY59032.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 361 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 17/189 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + G+L A+ +A + D + + + ++ A+ L K E Sbjct: 59 AQQAGNLEEARELLNEAAKLQSDHAETWWNLAELSIQQDDYPAAVDEL----KRYVELQS 114 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + + + A+ E ++ N+ A + +A+ Q +KA Sbjct: 115 SDPQGYLRLAQLYYLQNRYDAAEEWLDEVIRRTPNNFDAVMLSARLARKQADHQKAISEY 174 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +V PH + L+ + L ++ S ++ + DQ Sbjct: 175 YHALQVMPH-------------HAEATLELSELLIARHEPYRASSLLRDLSRRALMEEDQ 221 Query: 344 AHAKAMLAM 352 A L + Sbjct: 222 ARTHLNLGI 230 >gi|188591112|ref|YP_001795712.1| hypothetical protein RALTA_A0320 [Cupriavidus taiwanensis LMG 19424] gi|170938006|emb|CAP62990.1| conserved hypothetical protein; putative exported protein [Cupriavidus taiwanensis LMG 19424] Length = 647 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 50/376 (13%), Positives = 109/376 (28%), Gaps = 69/376 (18%) Query: 72 LFHMLHKRNYDKGYK--------------------ALYTGLMSIAAHNIPLARKMHSYVS 111 L A ++ +AA + P A+ + Sbjct: 39 LARWWRAPRRHARALAAGALLAAAAGAAHAAPPVGAGSLPMLQLAAADTPAAKPARPALP 98 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + + +L +I++ A+ + + FA + + Sbjct: 99 SLELTDD-IVYMVLAAEISIQRGLVGPAYRTYLELARQTRDPRFAQRATEI-AFNARIPQ 156 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--- 228 A A +I+P +P + + VL W A L Q+ R AIL Sbjct: 157 QALDAARLWKEITPTSPAAGQVLSTLLVLNGRWDDARPLLQQQLATVPASQRGDAILQLQ 216 Query: 229 -----------------------------LIARSLENADKGDMIASYHDAIESLKLCDNS 259 +A + GD + ++L+L Sbjct: 217 QQLSRTSDPAGAARLLQDLTRNEAKLPETQLALARARELAGDEPGALAALDQALRLRPAY 276 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314 A+ A L ++ + +A +L++ + +P H +A +Y L ++ + + Sbjct: 277 E-AAALMAAELRAEKQPDEAVAVLKRFLEKSPESVNGHITLARLYL-LKNDMPAAR-QEF 333 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRKE---IFLLLAQIE 368 L ++ + + +L+ + +A ++ P + LAQI Sbjct: 334 ETLRKVAPADPRVPLALGLTSLQAKNFGEAEQYLQEYLQLVEKQPSANPDIAYQYLAQIA 393 Query: 369 QANSHNTDKILYWTQS 384 + + + W Sbjct: 394 E-ERKDYAGAIRWLDR 408 >gi|45656035|ref|YP_000121.1| hypothetical protein LIC10125 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45599268|gb|AAS68758.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 1197 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 66/179 (36%), Gaps = 5/179 (2%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 +Y G + + +A+ + + E VY ++ + + E + L Sbjct: 419 IYEGDRHLRKGDTKIAKTFYEKAKK--ASEQEPSVYNAFGRLHFISGELKASEENFKKAL 476 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 I A+ L + A +Y + +++ + P + + Y KE+ +A Sbjct: 477 SIDKQNIPALQGLIRLYSSQKNQTLANQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536 Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 L +K N + N A+L SLE +K + ++ + ++ KL + + Sbjct: 537 ENVYKNLQKKFPNNEAINFRLAMLYYKISLEENEKNNHDSALNWISKAEKLSKDIPEIA 595 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 23/204 (11%), Positives = 57/204 (27%), Gaps = 41/204 (20%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-----------TREFAVYSLYFESCRI 167 + + A+ ++Y A E + TR + ++ R Sbjct: 192 PAQLNMQLGDAAVQLKKYEEAEVYFEEARKNDPELLSAKKSASVTRVASALENGNQAMRK 251 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW------ 221 + A + A+ P P + +L+ E+ A+ ++ Sbjct: 252 KNYKEAASHFQTAIQNDPKNPTPYIFLGNARILSGEYEVALKAFESSLALKSDYQEAISG 311 Query: 222 ---------NRNRAILLIARS---------------LENADKGDMIASYHDAIESLKLCD 257 N +++ ++ ++ L G+ + + +L Sbjct: 312 IAAVYYKTGNYRKSVAVLEKATSQFPNNAVYQNQMGLNMKALGEPAKALVYFTRAKELDP 371 Query: 258 NSIMASICAAKSLISQNKKRKAEV 281 + LIS+N+ + A Sbjct: 372 TFVEPVTNLVFLLISENRYKTARK 395 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 92/269 (34%), Gaps = 38/269 (14%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL A A + + E + L+ + ++E +Y A ++ E + Sbjct: 347 GLNMKALGEPAKALVYFTRAKELDPTFVEPVTNLVF--LLISENRYKTARKEAESLKSES 404 Query: 151 ATREF------------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 ++ L R GD A+ + KA S P V A + + Sbjct: 405 EKKQIISFIDVSEQIYEGDRHL-----RKGDTKIAKTFYEKAKKASEQEPSVYNAFGRLH 459 Query: 199 VLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ E + + + + + ++ + S +N + + + Sbjct: 460 FISGELKASEENFKKALSIDKQNIPALQGLIRLYSSQKNQTLANQYTKELENLTGN--DP 517 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL--------LS 304 + A+I ++ + + KAE + + + K P+ E +A +Y + Sbjct: 518 S---AAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAINFRLAMLYYKISLEENEKNNH 574 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK 333 ++ + + +A +L + E E+ + + Sbjct: 575 DSALNWISKAEKLSKDIPEIAETRKTIQE 603 >gi|124516404|gb|EAY57912.1| protein of unknown function [Leptospirillum rubarum] Length = 468 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 87/306 (28%), Gaps = 29/306 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPW 189 A V +L Y ++ R+ D + Sbjct: 131 TGDATGAIRLHRRARVFDEEDVRLVIALCEDYRQAGRLDDEMAILS--EYFHKKEGRNID 188 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR------AILLIARSLENADKGDMI 243 V + V ++W A+ + ++ + R + + D + Sbjct: 189 VLGRYRDRLVSRQKWEEALAVQSALSRSFGKGERRDLEVSNLVGIRYETGRLHLDHAETE 248 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + +LK+ A I A++ + + +A LE+ ++ + P IY +LL Sbjct: 249 LARRSFRGALKIDPLFSPARIGLAEAQSREGRVSEALTTLEEGFQKDRDP----IYLYLL 304 Query: 304 SE------NTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIA 355 E + L R + ++ S ++ ++ L + +D A + Sbjct: 305 EEMALEAGSPERILTPFERAVLSDPQN--SSLLYAQARLYDRLMMVDLALDRLESLEGRE 362 Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAM--PDPLWISDDGYLSSVWLPLSPIS 412 + + LL + + + L Q A P L+ G W Sbjct: 363 NWEGEFYRLLGDL-YLRNKDRVNALEAFQKGARAENHPGRLYCRFCGQRYLQWTGKCFSC 421 Query: 413 KTLCYF 418 Sbjct: 422 HRWGAL 427 >gi|168014093|ref|XP_001759590.1| predicted protein [Physcomitrella patens subsp. patens] gi|162689129|gb|EDQ75502.1| predicted protein [Physcomitrella patens subsp. patens] Length = 817 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 17/217 (7%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQKKKNAKEWNRNR 225 A A+ + P V + ++ A L ++NA+EW Sbjct: 261 YEDALVSFQLAVQLKPQDVRAHFLVGNAFYSLGDFVEARTSYQKALEAGEENAQEWEGIL 320 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + + + +G ++ + E+ L A +L + R A+ LE+ Sbjct: 321 PQVHVNLGIALEGEGMLLCACDHYREAAILNPRHYRALKLLGSALYGLGEYRAAQKCLEE 380 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P H ++ + L + + + ++N V++L + + + Sbjct: 381 ALVLKPDYADAHCDLGSALHSL--HDVEQAISEFQKAIDLNPNHVDALYNLGGLLKDSLR 438 Query: 341 IDQAHAKAMLAMKIAPRK------EIFLLLAQIEQAN 371 ++A +++ PR LL EQ Sbjct: 439 YERAAEMYQKVIQLKPRDWRAQLNRAVSLLGAGEQEE 475 >gi|302654959|ref|XP_003019275.1| hypothetical protein TRV_06679 [Trichophyton verrucosum HKI 0517] gi|291182989|gb|EFE38630.1| hypothetical protein TRV_06679 [Trichophyton verrucosum HKI 0517] Length = 938 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G++++ +R +A + Sbjct: 579 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 637 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230 P+ + A V+ + +A L+ ++ A NR+ A+ L+ Sbjct: 638 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 697 Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + L+ G + + + C S+ + A++ Sbjct: 698 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 757 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E L +A L +E S ++ S+ Sbjct: 758 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 815 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + + + K+ +F+ +A+I +K + W + A+ A D Sbjct: 816 SIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 873 >gi|308048847|ref|YP_003912413.1| sulfotransferase [Ferrimonas balearica DSM 9799] gi|307631037|gb|ADN75339.1| sulfotransferase [Ferrimonas balearica DSM 9799] Length = 656 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 71/208 (34%), Gaps = 14/208 (6%) Query: 159 SLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQ 213 L ++ GD+ +A + + L +P+ + K+W A L + Sbjct: 7 GLIQQAEAALKGGDIPTALTHTQQVLSEAPEHR--QGLYLAAVCHRYLKQWKPAERHLTR 64 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + R + +G + + ++ + + A+ Sbjct: 65 LLQLDPHYGRAHQ----EQGHTLLAQGKLQPAADAYRHAVSQNPALVASWAALARLAQHA 120 Query: 274 NKKRKAEVILE--KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 A+ L + +K P P + + + L + + + + +E++ ++ Sbjct: 121 GDGELAQRALAHHQHFKALP-PTLVTVNSLLHEGKLLKAEQLCRSFLQQHPSHIEAMRLL 179 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKE 359 +++A ++ +D A A+++ P Sbjct: 180 AQLAAKLNVLDDAEVLLDSALQLEPGNR 207 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 16/210 (7%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + AL ++ A + LA++ + QH L+ V L E + A + Sbjct: 110 WAALAR--LAQHAGDGELAQR--ALAHHQHFKALPP--TLVTVNSLLHEGKLLKAEQLCR 163 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 LQ + A+ L + ++ L+ A+ AL + P V +VQ +++ Sbjct: 164 SFLQQHPSHIEAMRLLAQLAAKLNVLDDAEVLLDSALQLEPGNRQVRFDLVQVLHRRQKY 223 Query: 205 SRAI---TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + ++ L + ++ A + + G + + L ++ Sbjct: 224 AESLLQAETLRDSEPGNPSFD-------TAYANQLVAVGRFDEALALYDQVLAKLPDNAN 276 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +L + ++ +A + ++ P Sbjct: 277 LHLVKGHALKTLGRQPEAIEAYQASYRHRP 306 >gi|186477743|ref|YP_001859213.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gi|184194202|gb|ACC72167.1| TPR repeat-containing protein [Burkholderia phymatum STM815] Length = 708 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 6/187 (3%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIAL-AERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 M + + +L+ A + A E + +LQ A++ L + Sbjct: 17 MDATAHAPAPLPDFDASAMLQAAFAHHQAGRTGEAAECYKQILQHDGMHPDAMHFLGVLA 76 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 C +G+L + K++ + P+A ++ + A++ AI A ++ Sbjct: 77 CDVGNLPAGIDLIEKSIQLHPNAIYLNN-LGNMRGRARDLQGAIAAYRAALSLAPDY--- 132 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + GD A+ + +L + A +L+ A Sbjct: 133 -AQAHSNLGHTLREAGDPAAAIDSCTVATRLKPDLPQAWTHLGNALLELGSDEGALDSYM 191 Query: 285 KIWKVNP 291 K + P Sbjct: 192 KALALQP 198 >gi|262304961|gb|ACY45073.1| acetylglucosaminyl-transferase [Armadillidium vulgare] Length = 289 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + + P A Sbjct: 34 GQVNEAEECYNTALRLCPTHADSLNNL--ANIKREQGFTEEATKLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVNEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFTEEATKLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q N A E L++ T ++ +L G A + KAL++ P+ Sbjct: 27 ANALKEKGQVNEAEECYNTALRLCPTHADSLNNLANIKREQGFTEEATKLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYDARMKKLVTIVGEQLERNRLPSVHPHH 236 >gi|81298858|ref|YP_399066.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942] gi|81167739|gb|ABB56079.1| TPR repeat [Synechococcus elongatus PCC 7942] Length = 788 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 9/197 (4%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 + + + T L + ++AL ++Q A L+ M+ P + Y+L + Sbjct: 342 LEAAATYLATLPRSPARILEQARLALTQQQPKAALALLDSMVM-PEAEQGEHYNLLGVAQ 400 Query: 166 RI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ ++A + L P P + + ++W A+ + Sbjct: 401 TQLGEWDTAIAIYRQGLQAQPHHPKLRTNLCVALRQQEQWEEALALSQALLEEVPAAIDR 460 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ ++ G + + + A + A+ L+ Q K + I E Sbjct: 461 ----LLLQADTLNLAGRYDQALSLYQQVVAREPERANAQLAIAEILLRQGKA-EGWDIYE 515 Query: 285 KIWKVNPHPEIANIYTH 301 + P +A + H Sbjct: 516 ARFAAE--PSLAALAAH 530 >gi|189467054|ref|ZP_03015839.1| hypothetical protein BACINT_03437 [Bacteroides intestinalis DSM 17393] gi|189435318|gb|EDV04303.1| hypothetical protein BACINT_03437 [Bacteroides intestinalis DSM 17393] Length = 474 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 7/141 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRN 224 ++G+ ++A Y KA ++ AP + V EW L + + Sbjct: 247 QLGNEDAALEYYQKAEELHGLAPEFIYTYIGLCKVSKGEWKEGYENLEKAILENETDEIA 306 Query: 225 RAILLIARS---LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 IL + L + G ++ ++ KL + + + I + K Sbjct: 307 SPILPSLYANAGLCLSKMGKKRKAHQYCKKAHKLSPEEPESLLIEGRIYIEEGDYDKGIK 366 Query: 282 ILEKIWKVNPHPEIANIYTHL 302 K +P A+ + + Sbjct: 367 QWAKALNCSPT---ADTWNEI 384 >gi|254787650|ref|YP_003075079.1| sulfotransferase domain containing protein [Teredinibacter turnerae T7901] gi|237685640|gb|ACR12904.1| sulfotransferase domain containing protein [Teredinibacter turnerae T7901] Length = 662 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 96/284 (33%), Gaps = 15/284 (5%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL ++ A + A V Q++ H + L L+ A + L Sbjct: 8 RALEQSECALKAGDHATALSAADAVLQENPQHRDGLY--LKAVCQRYLGNTKGALQTLTA 65 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + L +GDL A + KA ++P + ++Q + Sbjct: 66 LQSAAPGYGRGFQELGHCQLMMGDLKQAFKAYKKATQLNPGLIASWQ-RLEQLAKQMD-- 122 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 Q +NR +L+ S+ +G + + + + L+ + A Sbjct: 123 -LRKEHTQASAQLAYFNRLPPLLVSITSM--LSEGKLYKAENLCRQFLQEHKHHPEAMRL 179 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEI 320 AK + AE +LE V +PE A L++ + L +A +L E Sbjct: 180 LAKIGTQLHILDDAEFLLESC--VQLYPEFAQARLDLVNVLQKRQKYGKALTQATQLYEE 237 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 N + + A+ +G D A ++ P+ + L+ Sbjct: 238 NPVDRQIKSTYANAAMAVGDFDTALTTYDALLEQEPKNSVTWLM 281 >gi|221505095|gb|EEE30749.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii VEG] Length = 985 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 110/353 (31%), Gaps = 60/353 (16%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL G ++ A + + + + L L A E ++ + ++ Sbjct: 615 EALSRGSVATA--------RALYTCAIERLKTKKSLWLAL----ADLETKHGTTQDLEKL 662 Query: 146 MLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + + P + L + GD+ +A++ +A + + ++ A V+ Sbjct: 663 LAKAVVCCPQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLEREN 721 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-- 259 E++RA L + + + + + R + + D IA +A++S C Sbjct: 722 HEFARARKILKRTRAHVNTQKVWIQSVQLERQVGDYDAA--IALCEEALKSHAECPKLWM 779 Query: 260 --------------------------------IMASICAAKSLISQNKKRKAEVILEKIW 287 + +CA Q K A ILEK Sbjct: 780 IGGQLHREHPTKKDEEKAAEVFQRGTVVCCRSVPLWLCAVDCQREQGKWSVARAILEKAK 839 Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAH 345 NP +PE+ + + E G + A + E S ++ ++ Q H Sbjct: 840 LRNPKNPELWHAAIRIEVE--AGNKQMAQHVASKAVQECPNSGLVWAEAIFLEEKSAQTH 897 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396 K + L +A + K W ++ A W + Sbjct: 898 KAVDALTKCENDVHLVLAVACLFWKEGK-ISKARKWLNRSVTLDASFGDAWAA 949 >gi|158337864|ref|YP_001519040.1| hypothetical protein AM1_4750 [Acaryochloris marina MBIC11017] gi|158308105|gb|ABW29722.1| tetratricopeptide repeat-containing protein [Acaryochloris marina MBIC11017] Length = 659 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 70/219 (31%), Gaps = 32/219 (14%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAER---------------QYNIAHEKLEMML----- 147 + +H ++ L L + Q + A + L+ + Sbjct: 433 ADTLAKHGRPHDALRILRQAQANSLTGPLTITTLSKVLSQVGHHQEARKILQSVYPTKTQ 492 Query: 148 ---QIP----ATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 P R A + +YFE + + A ++ +AL + P P Sbjct: 493 FEYADPPISNEARLIAKHGEIYFELQQ---YDKALQHYDEALQLEPKFPLAHYHRGDVLR 549 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + +AI + ++ + + ++++L + Sbjct: 550 QLGHFDQAIEAYQTSLRLRSYSLDVTHKTYNGLGWSLFERKQVETAISAFKQAIRLNPQN 609 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN 297 A K+L++Q + KA L+ +++NP HP ++ Sbjct: 610 SAAHYGLGKALLTQQQSAKAIQHLQTAFELNPRHPGLSE 648 >gi|328700632|ref|XP_003241333.1| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 2 [Acyrthosiphon pisum] Length = 1090 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 35/304 (11%) Query: 71 MLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVY 123 L + H GY L L++ A ++ A + + Q + L Sbjct: 155 ALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPELYCVRSDLGN 212 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKA 180 LL+ + + A L+ TR A +L + ++ A + KA Sbjct: 213 LLKA-----LGRLDEAKSCY---LKAIETRPDFAVAWSNLGCVFNSLNEIWLAIHHFEKA 264 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P+ + ++ + R+++ + + A++ + ++G Sbjct: 265 VALDPNFLDAYINLGNVLKESRIFDRSVSAYLRALALSPT----NAVVHGNLACVYYEQG 320 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + +++L N A A +L + + AE K+ P H + N Sbjct: 321 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALKLCPTHADSLNNL 380 Query: 300 THLL------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ E T LK E ++ + + G + +A A++ Sbjct: 381 ANIKREQGYIEEATGLYLKALEVFPEFAAAHSN----LASVLQQQGKLTEALNHYQEAIR 436 Query: 354 IAPR 357 I P Sbjct: 437 IQPT 440 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + + L + T +L G ++ A +A+++ P+ P + Sbjct: 289 DRSVSAYLRALALSPTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 348 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N K A L + ++G + + +++L++ Sbjct: 349 ALKEKGQVVDAEECYNTALKLCPT----HADSLNNLANIKREQGYIEEATGLYLKALEVF 404 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A ++ ++ P A+ Y+++ + ++ L Sbjct: 405 PEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQPT--FADAYSNMGNTLKEMQDIQNAL 462 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A A+++ P Sbjct: 463 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALRLKPD 508 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 354 GQVVDAEECYNTALKLCPTHADSLNNL--ANIKREQGYIEEATGLYLKALEVFPEF-AAA 410 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I P + ++ A+ ++ + Sbjct: 411 HSNLASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQ 470 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +L+L + A A L Sbjct: 471 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALRLKPDFPDAYCNLAHCL 520 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%) Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + AL + P + A + + E+ A Sbjct: 359 AEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGLYLKALEVFPEF----AAAHSNL 414 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 + +G + + + E++++ A +L + A + ++NP Sbjct: 415 ASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQINPA 474 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 H +A+I H S N + + + ++ ++ Sbjct: 475 FADAHSNLASI--HKDSGNIPEAIASYRTALRLKPDFPDAYCNLA 517 >gi|301058980|ref|ZP_07199949.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300446976|gb|EFK10772.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 824 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 21/238 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 DL + KA+ SP E + + ++ A++ + + Sbjct: 458 QAKKDLGGSLIAGKKAVQYSPFTVSAYENLGFIHFEMGQFHEAVSMYRKAIRIKP----G 513 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A L G + + +LK+ N + A + A+++ ++ + +A Sbjct: 514 KAELYQDLGTVFLMHGQLDNAVSQFSRALKIRPNFVAAHLGLARAMGAKGRNEEAIAHFR 573 Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-----IVSKI 334 ++ K+NP ++A ++ + A+RL ++ E+ E + ++ Sbjct: 574 EVLKINPGNLEAANDLAWVFA-TYPDAKFRNGPEAVRLAKMVCEATEYKLPLPLDTLAAA 632 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 E G D+A A A +A L A IE+ K A + +P Sbjct: 633 YAESGLFDKAQETAKKAGILAKSTGQERLWADIERRLQSYRSK------RAFCSPRNP 684 >gi|218550804|ref|YP_002384595.1| cellulose synthase subunit BcsC [Escherichia fergusonii ATCC 35469] gi|218358345|emb|CAQ90992.1| cellulose synthase subunit [Escherichia fergusonii ATCC 35469] Length = 1157 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 14/255 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ I L+ ++ + + + L ++ ++G Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 476 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ +A+ ++ + + P+ PE Y Sbjct: 477 WGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 536 Query: 301 HLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAMLA 351 LS + + L L + N E + + V + A + + + Sbjct: 537 LYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAML 596 Query: 352 MKIAPRKEIFLLLAQ 366 + P I L LA Sbjct: 597 RQQPPSSRIDLTLAD 611 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWGQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYAAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 >gi|302509640|ref|XP_003016780.1| hypothetical protein ARB_05073 [Arthroderma benhamiae CBS 112371] gi|291180350|gb|EFE36135.1| hypothetical protein ARB_05073 [Arthroderma benhamiae CBS 112371] Length = 938 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 49/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G++++ +R +A + Sbjct: 579 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 637 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230 P+ + A V+ + +A L+ ++ A NR+ A+ L+ Sbjct: 638 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 697 Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + L+ G + + + C S+ + A++ Sbjct: 698 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 757 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E L +A L +E S ++ S+ Sbjct: 758 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNLSQAKSLMSKALQEVPNSGLLWSE 815 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + + + K+ +F+ +A+I +K + W + A+ A D Sbjct: 816 SIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 873 >gi|260463350|ref|ZP_05811551.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum WSM2075] gi|259030940|gb|EEW32215.1| Tetratricopeptide TPR_2 repeat protein [Mesorhizobium opportunistum WSM2075] Length = 289 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 11/244 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A ++ A E E+ L + L DL A+ +L P Sbjct: 15 RAVAAFNSGNHDQALELCELGLTQHPGDPALCHLLAAVLFAKADLLEARARIEASLAARP 74 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D + + A+ L + + + A +L+ R+ GD A+ Sbjct: 75 DNVPALILACRIARAEGRFEAALRQLERAAR-----LSSHAEILVERARTLDQAGDSSAA 129 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTH 301 L+ S A+ + + +AE +LE+ HP ++ + Sbjct: 130 GVSWTLVLQQDPKSEEAAARLGRLAWERGASLEAEALLERAVAGGGHPTAWFDLGLVRQD 189 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L + + R+ E++ ++ E+ V + + E G +D A A LA ++P Sbjct: 190 LRKFGSAA--QAYRRVLEMSPDAPEAAVNLGVVLQETGDLDGAMAAYSLAYGLSPSTFGV 247 Query: 362 LLLA 365 + +A Sbjct: 248 IAMA 251 >gi|254785517|ref|YP_003072946.1| tetratricopeptide repeat protein [Teredinibacter turnerae T7901] gi|237686027|gb|ACR13291.1| Conserved Hypothetical protein [Teredinibacter turnerae T7901] Length = 394 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 75/287 (26%), Gaps = 76/287 (26%) Query: 39 TSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKAL---------- 88 S ++ +L+ L L +SR P KRNY G L Sbjct: 1 MSDPIVFVLLFAALAIGFSLGRLSRGPGRLPQQQSSSWLKRNYYVGLNQLLNDEPDAAVD 60 Query: 89 ---------YTGL---MSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 L +++ A A ++H + + + L Q+A Sbjct: 61 TFISSLEVNSETLETHLALGALLRRRGETARAIRVHQNLLARPSLPRPQL------QLAQ 114 Query: 132 AE--------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 E + A + + Y E KAL Sbjct: 115 LELGVDFLKAGLLDRAETLFKELADAK----------YTEKKVR----------EKAL-- 152 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-----KEWNRNRAILLIARSLENAD 238 +V+ Y +W AI ++ W +A + + Sbjct: 153 --------IYLVELYRETSDWLDAIDVADRLTSRKFSSTADNWREMQAHFSCELAEKALA 204 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++ + + + A + A+ ++ A IL+K Sbjct: 205 NNQVLEARRLLRNAQRFDKQCARAQLMQAQIELNDGAAAAALGILKK 251 >gi|221482020|gb|EEE20386.1| U5 snRNP-associated 102 kDa protein, putative [Toxoplasma gondii GT1] Length = 985 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 54/353 (15%), Positives = 110/353 (31%), Gaps = 60/353 (16%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL G ++ A + + + + L L A E ++ + ++ Sbjct: 615 EALSRGSVATA--------RALYTCAIERLKTKKSLWLAL----ADLETKHGTTQDLEKL 662 Query: 146 MLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + + P + L + GD+ +A++ +A + + ++ A V+ Sbjct: 663 LAKAVVCCPQAEVLWLM-LAKQHWLQGDVQAARKVLAEAFVHNENNEAISLAAVKLEREN 721 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-- 259 E++RA L + + + + + R + + D IA +A++S C Sbjct: 722 HEFARARKILKRTRAHVNTQKVWIQSVQLERQVGDYDAA--IALCEEALKSHAECPKLWM 779 Query: 260 --------------------------------IMASICAAKSLISQNKKRKAEVILEKIW 287 + +CA Q K A ILEK Sbjct: 780 IGGQLHREHPTKKDEEKAAEVFQRGTVVCCRSVPLWLCAVDCQREQGKWSVARAILEKAK 839 Query: 288 KVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSIDQAH 345 NP +PE+ + + E G + A + E S ++ ++ Q H Sbjct: 840 LRNPKNPELWHAAIRIEVE--AGNKQMAQHVASKAVQECPNSGLVWAEAIFLEEKSAQTH 897 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH--AMPDPLWIS 396 K + L +A + K W ++ A W + Sbjct: 898 KAVDALTKCENDVHLVLAVACLFWKEGK-ISKARKWLNRSVTLDASFGDAWAA 949 >gi|262197000|ref|YP_003268209.1| hypotheticalprotein [Haliangium ochraceum DSM 14365] gi|262080347|gb|ACY16316.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365] Length = 3936 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 56/170 (32%), Gaps = 4/170 (2%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER--QYNIAHEKLEMMLQI 149 + ++ H AR V + + + LE + + Sbjct: 941 MAAVRLHEPERARAYQREVL-VLSPDDPEAMDALEELATQLSDWPDLLTVQRRRVALADA 999 Query: 150 PATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + ++ + + E R+ DL++A L + P++ A+ + +W + Sbjct: 1000 DDAKIALLFKIAFVEEERLEDLDAAVATYESLLALVPESQRAMRALARLQEERGDWEGLV 1059 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 L ++ ++ + + A+L+ L + + E+L + Sbjct: 1060 DALGRELSHSDDTDTKVALLMRIGGLYERNLERPSEALGAYCEALSVAPG 1109 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 89/315 (28%), Gaps = 45/315 (14%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATR 153 + A + V + L L I + + L + R Sbjct: 3387 GELDAAVEAWREVLALDEGDRDALARL--AIIHEQRGDWYALIDILGQSARYAANSDEER 3444 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 F +S + DL++A LD++PDA A+ + ++W + + Sbjct: 3445 RFRSRIAQLQSDTLEDLDAAVEAWQSVLDVAPDAEDALTALEGIHTRREDWGAVQDTMAR 3504 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + A+L L + + ++L L D + + L Sbjct: 3505 RLDLLDAPADRVAVLHRLADLAADKRDANEDAIVYLFQALDLDDTHLPTYEKLDELLGKA 3564 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------------------- 313 + +LE+ A +Y L G+ +R Sbjct: 3565 ERWHDLVDLLERA---------AGVYARLAGMGAAGQPQRKEIDCLARAADIWEGPLANP 3615 Query: 314 ------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE----IFLL 363 ++ V +L +SKI G D+ A+ + P ++ Sbjct: 3616 DAAAEILEKILAREPAYVPALTRLSKIYESAGDWDRCAEVLDRALALGPTGRDAAELYFR 3675 Query: 364 LAQIEQANSHNTDKI 378 + ++ + S + Sbjct: 3676 MGEVAREQSGDAAAA 3690 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 64/226 (28%), Gaps = 8/226 (3%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A K L P + + Y A +W R L++ + Sbjct: 3615 PDAAAEILEKILAREPAYVPALTRLSKIYESAGDWDRCAEVLDRALALGPTGRDAAELYF 3674 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE----K 285 + GD A+ ++L + + A + +L + Sbjct: 3675 RMGEVAREQSGDAAAAMSRWQQALASDPSYLPAIASIEAAAREAEDWPVVADMLTRRHNQ 3734 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSID 342 + K E+A +L + + + L ++ E L ++ + D Sbjct: 3735 VQKPAEQRELALALVDILRKKLGQRAQAIPLLEGLVSEGEDDPEVLRPLADLYCAAQQHD 3794 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 +A A + +A + + + + AL A Sbjct: 3795 RAVPIYERLADAAKKARQLRDVA-VYRQRLASILEARGQMDEALAA 3839 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 8/173 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-- 148 L++ A + + + ++ T V ++ E+ Y+ E L Sbjct: 2928 ALLAYAPGHGGTRAALDALAQREETAERASAVL---ERLYEDEQNYDALAALYEQRLSMP 2984 Query: 149 --IPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 P R L R+GDL+ A AL + V + + + W Sbjct: 2985 TPNPERRFELYRMLAQVCEERLGDLDRAFEVWALALSEYSSSEEVQDHLERLAASRGAWE 3044 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + L Q+ + A L SL GD+ + +L + + Sbjct: 3045 DLVALLEQRLAELLDAELEYAYALKLASLYEDALGDLEGAAEKYRRALDVAAD 3097 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 75/219 (34%), Gaps = 15/219 (6%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ Y + L ++P+ A+V Y ++W+R + +A + + + L R Sbjct: 808 ARAY-ERVLAVAPEHLEAARALVPIYEATEKWARLLGTYEVLLGHAADDDERLDLELKIR 866 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 L A G ++ A + +L + ++ + IL+ + Sbjct: 867 DLCEARLGSKALAFQWAARAYRLAPGREDLRADLIRLGADADQWNEVAEILDARARDRAT 926 Query: 293 ---------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID- 342 E+ + L E + + L ++ + E++ + ++A ++ Sbjct: 927 GTDEKLALLRELGRMAAVRLHEPERARAYQREVLV-LSPDDPEAMDALEELATQLSDWPD 985 Query: 343 ---QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + LA + + +A +E+ + D Sbjct: 986 LLTVQRRRVALADADDAKIALLFKIAFVEEERLEDLDAA 1024 >gi|118088252|ref|XP_419586.2| PREDICTED: similar to tetratricopeptide repeat domain 13 [Gallus gallus] Length = 847 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 84/244 (34%), Gaps = 21/244 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A + MLQ A+ + + + D+ +A + + + PD Sbjct: 140 NGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVISLEPDH 199 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + S A++ L + + R+R L D Sbjct: 200 PEVFEQRAEILSPLGRISEALSDLTKAIQLQPSARLYRHRGTLYFIS----EDYATAHED 255 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYT 300 + ++E K A + + + ++A ++ K ++ + + Y Sbjct: 256 FQHSLELNKNQPI---AMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYR 312 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L + + + + +N+ V++L + + GS+D+A +++ P E+ Sbjct: 313 ELGNFDAAT--ESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNEV 370 Query: 361 FLLL 364 + Sbjct: 371 CQYM 374 >gi|325128925|gb|EGC51779.1| hypothetical protein NMXN1568_0301 [Neisseria meningitidis N1568] gi|325130918|gb|EGC53647.1| hypothetical protein NMBOX9930304_0322 [Neisseria meningitidis OX99.30304] gi|325136914|gb|EGC59511.1| hypothetical protein NMBM0579_0312 [Neisseria meningitidis M0579] gi|325205416|gb|ADZ00869.1| conserved hypothetical protein [Neisseria meningitidis M04-240196] Length = 389 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ + QQ ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + + A+E+ K C Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 331 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|224062053|ref|XP_002300731.1| predicted protein [Populus trichocarpa] gi|222842457|gb|EEE80004.1| predicted protein [Populus trichocarpa] Length = 797 Score = 48.0 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 19/146 (13%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 RA+ L+ +L G+ A+ E++ + + A A +L + KA Sbjct: 338 THFRALKLLGSAL--FGVGEYKAAVKALEEAIFMKPDFADAHCDLASALHAMGDDEKAIE 395 Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331 + +K + P H + + +Y L G+ +RA L + + Sbjct: 396 VFQKAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNR 448 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + L G ++A A+K+ R Sbjct: 449 AVSLLGAGETEEAKKALKEALKLTNR 474 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 68/195 (34%), Gaps = 11/195 (5%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257 ++ A + A+ LL + +G ++++ E+ LC Sbjct: 278 GKYKEAKEEFLLALEAAEAGGNQWGYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCP 337 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 A +L + + A LE+ + P H ++A+ H + ++ ++ Sbjct: 338 THFRALKLLGSALFGVGEYKAAVKALEEAIFMKPDFADAHCDLASA-LHAMGDDEKA-IE 395 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 + ++ V++L + + +++G +A + + P L + + Sbjct: 396 VFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNRAVSLLGA 455 Query: 373 HNTDKILYWTQSALH 387 T++ + AL Sbjct: 456 GETEEAKKALKEALK 470 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 4/90 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 +GD A KA+D+ P + Y+ + RA + N R Sbjct: 386 AMGDDEKAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWP--NHWR 443 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKL 255 A L R++ G+ + E+LKL Sbjct: 444 AQL--NRAVSLLGAGETEEAKKALKEALKL 471 >gi|326469564|gb|EGD93573.1| 20S cyclosome subunit BimA/Nuc2/Cdc27 [Trichophyton tonsurans CBS 112818] Length = 801 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 70/198 (35%), Gaps = 15/198 (7%) Query: 135 QYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 ++ A + Q+ + + E + + AQ A+ +P Sbjct: 591 DHDQALKCFRRATQVDPAFAYGYTLQG--HEYMSNEEYDKAQDAYRAAIKANPRHYSAWY 648 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + Y + + F + + A N +L+ + L + ++ A+ + Sbjct: 649 GLGKVYERMGK----LKFAERHLRTASNINPANVVLICSIGLVLERQNNLKAALLQYSRA 704 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLLSENT 307 L +S++A + A++L+ N+ A +L+ + P H + +Y + + Sbjct: 705 SSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQDKGN 764 Query: 308 VGKLKRALRLEEINKESV 325 +K ++ ++ Sbjct: 765 A--IKHFTTALNLDPKAA 780 >gi|302853740|ref|XP_002958383.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f. nagariensis] gi|300256263|gb|EFJ40533.1| hypothetical protein VOLCADRAFT_121713 [Volvox carteri f. nagariensis] Length = 1179 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 20/251 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 ++ A +Y A + + +L T L + G A RYA ALD+ Sbjct: 559 RARLMEASGEYKAAAQLYKDVLSEHGTYIDCYLRLACIARAKGSHKEALRYAQSALDVEG 618 Query: 186 DAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNR---NRAILLIARSLENAD 238 + Q ++ +++ A I L + R L A D Sbjct: 619 GHADALALMSQLHMERRDYEAAGRTLIQLLQDDGSKRDVYGRIGYANTYLYTAPRDRRED 678 Query: 239 KGDMIASY-----HDAIESLKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEKIWK 288 + + L+ ++ A+ A + + A + L + Sbjct: 679 SAKKAEARFSKALDEYRSVLEADPRNVWAANGCGAALAELGYLDAAQV-YASMALSDGFL 737 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALR-LEEI-NKESVESLVIVSKIALEMGSIDQAHA 346 P I HL + + L+++ +K + L+ +++ + +++A + Sbjct: 738 TIPDVLINLANVHLARCDYQDAVHLYRTALDKLEHKHHPQVLLYLARALYDSNKLNEAQS 797 Query: 347 KAMLAMKIAPR 357 A+ +AP Sbjct: 798 CLKRAIHLAPT 808 >gi|296419827|ref|XP_002839493.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635654|emb|CAZ83684.1| unnamed protein product [Tuber melanosporum] Length = 521 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 75/255 (29%), Gaps = 43/255 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNS 172 +F+ + LA+ + A + E ++ T + + S + S Sbjct: 25 SFNQPVQSLIESANALLAKGDMHGALDHFEAAIKKDPTNYLTIFKRGATYLSLGRSNQAS 84 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A L + PD + +W+ A + KK A L A Sbjct: 85 AD--FDAVLSLKPDFEAALLQRAKLKSRTGDWNAARR--DYKKAGGVTGKERIAELEEAE 140 Query: 233 -----SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 ++E KGD A A ++ + A+ + + + +A Sbjct: 141 RAVKTAMEAEKKGDYEACVTHAGTAIMVASGLHSLRSLRARCRLKRGEVHEAVG------ 194 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL-EMGSIDQAHA 346 ++ + L ++ +++ + ++ + + D+A A Sbjct: 195 ------DLTH-------------------LVQLLPGNIDPHLQIANLLYFSVNDYDRAVA 229 Query: 347 KAMLAMKIAPRKEIF 361 + + P + Sbjct: 230 QLRKCLHSDPDSKPC 244 >gi|126659115|ref|ZP_01730255.1| hypothetical protein CY0110_04878 [Cyanothece sp. CCY0110] gi|126619643|gb|EAZ90372.1| hypothetical protein CY0110_04878 [Cyanothece sp. CCY0110] Length = 380 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 68/228 (29%), Gaps = 13/228 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 N A +Q+ + L R D A + + + P+ P Sbjct: 140 TGDNNNAASAYYYAIQLNPQSVKSYIGLGVVLLRQEDYEGAAEAYKRVIALDPNNPEAFA 199 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + K+ +A+ +L + R +L A +G + + Sbjct: 200 IMGSSLLQQKQLDQAVQYLGNAVERFSGDVDLRLLLATAY----LQQGQLELGKEQLTRA 255 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYT-----HLLSEN 306 +L ++ + A+ Q +A I + + PE Y L + Sbjct: 256 ERLDPSNTKIQLKIARIYEVQENLDEALKIYRRISYLNRKSPE---AYAGVGRIQLAQND 312 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +G + L E+ ++ E + E +A A K+ Sbjct: 313 YLGAIITYKDLIELIPQNPEPYYYLGVAFKERQRTSEAKKALERAKKL 360 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 11/195 (5%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 YV ++ RAI Q + + A + + ++ +G+ A+ ++L + Sbjct: 69 YVDKGDYQRAIATYEQA----ASLDNDNAKIFSGIAYLHSQQGNYQAAVKYYQQALSIDS 124 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLK 312 ++ SL + A ++N P+ Y L E+ G + Sbjct: 125 SNANFYYALGDSLANTGDNNNAASAYYYAIQLN--PQSVKSYIGLGVVLLRQEDYEGAAE 182 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 R+ ++ + E+ I+ L+ +DQA A++ LL Sbjct: 183 AYKRVIALDPNNPEAFAIMGSSLLQQKQLDQAVQYLGNAVERFSGDVDLRLLLATAYLQQ 242 Query: 373 HNTDKILYWTQSALH 387 + A Sbjct: 243 GQLELGKEQLTRAER 257 >gi|26250164|ref|NP_756204.1| cellulose synthase subunit BcsC [Escherichia coli CFT073] gi|227883691|ref|ZP_04001496.1| cellulose synthase subunit BcsC [Escherichia coli 83972] gi|300971350|ref|ZP_07171419.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|301046599|ref|ZP_07193739.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|26110593|gb|AAN82778.1|AE016768_196 Cellulose synthase operon protein C [Escherichia coli CFT073] gi|227839271|gb|EEJ49737.1| cellulose synthase subunit BcsC [Escherichia coli 83972] gi|300301437|gb|EFJ57822.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|300411274|gb|EFJ94812.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|307555633|gb|ADN48408.1| cellulose synthase subunit [Escherichia coli ABU 83972] gi|315295429|gb|EFU54759.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1] Length = 1157 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDPAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAYIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIAR---------SLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQ 273 + +L + + + E +L ++ + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRGQWNSNIQELVNRLQNDQV---LETANRLREN 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSSRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ I + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RENGKEAEAEAMLRQQPPSSRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K I + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPAIDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEALAGDPTQALETYKDAM 738 >gi|229587866|ref|YP_002869985.1| cellulose synthase operon protein C [Pseudomonas fluorescens SBW25] gi|22001533|sp|P58937|BCSC_PSEFS RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|18535635|gb|AAL71845.1| WssE [Pseudomonas fluorescens] gi|229359732|emb|CAY46581.1| cellulose synthase operon protein C precursor [Pseudomonas fluorescens SBW25] Length = 1279 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 108/344 (31%), Gaps = 66/344 (19%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE- 141 K +KAL G + A LA ++ + ++ + + + AE A Sbjct: 278 KAFKALDDGDLKTA--EPLLAARLAQKSNDVDALGGMGVLRQQQERYSEAENYLVQATRL 335 Query: 142 ----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + L R + + S ++ R G A+ +A ++P P A+ Sbjct: 336 PGGAAWQSALND--VRYWNLISQSRDAQRAGRSAQARDLVAQAERLNPGQPGAAIALAGF 393 Query: 198 YVLAKEWSRA----ITFLNQ----------------------------------KKKNAK 219 ++ A L + ++ Sbjct: 394 QAQDNQFDDAEAGYRKVLARHPGDPDALSGLINVLSQSGQPDEALKLIDSVSPAQRAKFA 453 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A+ +GD+ A+ ++L + A+ + + R A Sbjct: 454 PSVKINALRATQVGKLAEQRGDLKAAQAAYRQALDADPENPWTRFALARMYLRDGQIRNA 513 Query: 280 EVILEKIWKVNP-HPE--------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +++ + K P P+ A + +E T+G++ A R ++N+ + + + Sbjct: 514 RALIDGLLKSQPNQPDALYTSTLLSAQLSEWKQAEATLGRIPTAQRTADMNELA--TDIA 571 Query: 331 VSK---IALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQ 366 + + IA+E Q L + P + + +L A Sbjct: 572 LHQQTDIAIETARRGQRPEALALLGRSEPLTRNKPERVAVLAAA 615 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 14/174 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT-----REFAVYSLYFESCRI-----GDLNS 172 LL + L +Y+ A E L + P T R + LY DL + Sbjct: 644 KLLYANVLLKANKYSEAGEILREVQGQPLTETGRQRYDDLIYLYRVKQADALREKNDLVA 703 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + AL P+ A+ + Y + +A+ + R L + Sbjct: 704 AYDMLSPALAQRPNDALGVGALARMYAASGNGKKAMELYAPLIQQNPNNAR----LQLGL 759 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D + + ++L L + AA+ K +A +L K Sbjct: 760 ADIALKGNDRGLAQSASDKALALEPGNPEILTSAARIYQGLGKNSEAAELLRKA 813 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 26/218 (11%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + GDL +AQ +ALD P+ PW A+ + Y+ + A ++ K+ Sbjct: 468 KLAEQRGDLKAAQAAYRQALDADPENPWTRFALARMYLRDGQIRNARALIDGLLKSQPN- 526 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL-------ISQN 274 + S + ++ A+ + + D + +A+ A + Sbjct: 527 QPDALYTSTLLSAQLSEWKQAEATLGRIPTAQRTADMNELATDIALHQQTDIAIETARRG 586 Query: 275 KKRKAEVILEKIWKVNP----HPE----IANIYTHLLSENTVGKLKRALRLEEINKE-SV 325 ++ +A +L + P PE +A Y + L ++ E N +V Sbjct: 587 QRPEALALLG---RSEPLTRNKPERVAVLAAAYVEV--GAAQYGLDMMQKVVENNPNPTV 641 Query: 326 ESLVIVSKIALEMGSIDQA----HAKAMLAMKIAPRKE 359 + ++ + + L+ +A + R+ Sbjct: 642 DQKLLYANVLLKANKYSEAGEILREVQGQPLTETGRQR 679 >gi|310793643|gb|EFQ29104.1| PRP1 splicing factor [Glomerella graminicola M1.001] Length = 925 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 37/260 (14%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+ +A +PD + A V+ E RA L + + A Sbjct: 599 LAKEKWQAGEVDNARLVLARAFKSNPDNEDIWLAAVKLEAENGETERARKLLEEARDQAP 658 Query: 220 EWNRN--------------RAILLIARSLE---------------NADKGDMIASYHDAI 250 A+ L+ ++L+ D G + + Sbjct: 659 TDRVWMKSVVFERVLGNGDAALDLVQQALQYFPATAKLWMLKGQIYEDLGKVGQAREAYS 718 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309 +K S+ + ++ KA +L++ P PE+ + E G Sbjct: 719 TGVKAVPKSVPLWLLYSRLEEKAGLVVKARSVLDRARLAVPKSPELW--CESVRIERRAG 776 Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A L +E +S ++ S+ LE + + + K+ +F+ +A+ Sbjct: 777 NVNQAKSLMAKALQEVPKSGLLWSEQIWHLEPRTQRKPRS-LEAIKKVDNDPILFVAVAR 835 Query: 367 IEQANSHNTDKILYWTQSAL 386 I +K W + AL Sbjct: 836 IFWGERK-LEKAQNWFEKAL 854 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 82/232 (35%), Gaps = 14/232 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 G +A+ + AL + ++ W+ A +++ L Q + A E Sbjct: 536 INRGMYETARAIYSYALRVFVNSRTLWMAAADLERN------HGTKESLAQVLEKAVEAC 589 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +L + + E G++ + + K ++ + A K + +A + Sbjct: 590 PKSEVLWMMLAKEKWQAGEVDNARLVLARAFKSNPDNEDIWLAAVKLEAENGETERARKL 649 Query: 283 LEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 LE+ P + ++ +L L + + + + ++ +I ++G Sbjct: 650 LEEARDQAPTDRVWMKSVVFERVLGNGDAA-LDLVQQALQYFPATAKLWMLKGQIYEDLG 708 Query: 340 SIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + QA +K P ++LL +++E+ K A A+P Sbjct: 709 KVGQAREAYSTGVKAVPKSVPLWLLYSRLEEKAGL-VVKARSVLDRARLAVP 759 >gi|227354843|ref|ZP_03839260.1| cellulose biosynthesis protein C [Proteus mirabilis ATCC 29906] gi|227165161|gb|EEI49992.1| cellulose biosynthesis protein C [Proteus mirabilis ATCC 29906] Length = 1236 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 85/283 (30%), Gaps = 44/283 (15%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL A + L + + A+ L + + R GDL + Q+ L+ + + Sbjct: 280 ALNTGNLKQATTYFKQALTVDSQDAQALAGLGYVALRSGDLATGQKL----LNQASQSGG 335 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 +Q + + + ++ K +L + S Sbjct: 336 EQGQKWKQQAEDAGFYSQLREVQRQAKQGNTQQALDKLLPLTHSSG-----------EKG 384 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306 + + + A L Q A +L ++++ + E A Y + Sbjct: 385 LSAH----------LLQADLLRKQGNLPAAYQLLSELYQQHSQNEKVISAYYYLLIQQGK 434 Query: 307 TVGKLKRALRLEEINKESVESLVIV-----------SKIALEMGSIDQAHAKAMLAMKIA 355 A +L S+ + ++ ALE G QA A + Sbjct: 435 NSQ----AEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQARQLLTQAQRKN 490 Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397 P+ ++L LA++ A T Q D +I+ Sbjct: 491 PQNNWVYLDLARLMIAEGDKTQADQLILQLERRQTRDANYIAA 533 Score = 43.4 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 79/218 (36%), Gaps = 25/218 (11%) Query: 86 KALY-TGLMSIAAHNIPLARKMHSYVS----------QQHTFHNEYLVYLLEVQIALAER 134 +AL G +++ + ++ +K+ + S +Q + L EVQ + Sbjct: 305 QALAGLGYVALRSGDLATGQKLLNQASQSGGEQGQKWKQQAEDAGFYSQLREVQRQAKQG 364 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFES---CRIGDLNSAQRYATKALDISPDAP 188 A +KL +P T L ++ + G+L +A + ++ Sbjct: 365 NTQQALDKL-----LPLTHSSGEKGLSAHLLQADLLRKQGNLPAAYQLLSELYQQHSQNE 419 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGDMIAS 245 V A + + S+A + ++ + N + + L + + + G + Sbjct: 420 KVISAYYYLLIQQGKNSQAEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQA 479 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 ++ + + + A+ +I++ K +A+ ++ Sbjct: 480 RQLLTQAQRKNPQNNWVYLDLARLMIAEGDKTQADQLI 517 >gi|169625057|ref|XP_001805933.1| hypothetical protein SNOG_15795 [Phaeosphaeria nodorum SN15] gi|160705593|gb|EAT76890.2| hypothetical protein SNOG_15795 [Phaeosphaeria nodorum SN15] Length = 481 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 75/281 (26%), Gaps = 37/281 (13%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREFAVY-S 159 A + +S + + L++ + LA A + + + P Sbjct: 15 AAPLTCALSAADIPADIPVSQLIKDASVKLASGDTQDALTYFDVAIARDPQNYLTFFRRG 74 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 +G AQ K L++ P + +W+ A K + Sbjct: 75 --AAYLSLGRAQQAQHDFDKVLELKPGFEGALVQRAKIRARKADWAAARKDYEAAGKTDE 132 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + ++GD A A + I A + K R Sbjct: 133 IAQLDEAEGAAMLAQVAVNQGDWDACIQHAGTA-----------IMVAGTAYDIRKTR-- 179 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEM 338 V + L +INK +E + + + Sbjct: 180 ------------------ARCRFEKGEVVEGISDLQHLLQINKGDIEPHLQSSAMAFYSL 221 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 G ++ ++ P ++ + L + E+ K+ Sbjct: 222 GETEKGIKHIAQCLQSDPDSKVCMKLRRREKNLEKTLKKVR 262 >gi|108757417|ref|YP_633022.1| adventurous gliding motility protein AgmK [Myxococcus xanthus DK 1622] gi|108461297|gb|ABF86482.1| adventurous gliding motility protein AgmK [Myxococcus xanthus DK 1622] Length = 3822 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 8/185 (4%) Query: 99 NIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154 + A K+ + + + L+E + + A E++E M T + Sbjct: 9 DPGAAAKVKEALDRCFLLWPGMPEGLSLIEKLTLRSGGDFAPAIEQIEAMAGEVKDRTAQ 68 Query: 155 FAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + R+ D + A KA+ P +Q + A+ L Sbjct: 69 VDLWLRVGTLRLG-RMNDADGALAAFEKAVAADPSRADAASLAAEQLLEKGRAPEAVAVL 127 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K+ + + L L D A+ +LKL +A+ A+ L Sbjct: 128 ERYLGTVKDRSTQAGMRLRLADLFLTQLKDADAAREHLEAALKLDPTQALAAFQLARLLA 187 Query: 272 SQNKK 276 ++ Sbjct: 188 EDDEL 192 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 13/190 (6%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + A + +H+ + N + + A Q A E + +I Sbjct: 2911 AALAVDAECRPALHALGTMYERSGNWPFALEMLSKEAELAGQSKDAVELYYRLGKINEDM 2970 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 D SA+ +AL + P A+ K+WS L Q Sbjct: 2971 LM-------------DTGSARTAYQQALAVDPGHLPSIRALKGIQEQEKDWSGYEQTLRQ 3017 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + ++ LL + D + E+LK +S+ A+ + I+ Sbjct: 3018 EAEQTEDPAAKGRALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAH 3077 Query: 274 NKKRKAEVIL 283 E +L Sbjct: 3078 EDWASGERML 3087 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 35/322 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + AR + H + L +Q E+ ++ + L + Sbjct: 2973 DTGSARTAYQQALAVDPGHLPSIRALKGIQ--EQEKDWSGYEQTLRQEAEQTEDPAAKGR 3030 Query: 159 SLYF----ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFL 211 +L + D ++A Y +AL PD+ + Y+ ++W+ + + Sbjct: 3031 ALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAHEDWASGERMLDIV 3090 Query: 212 NQKKKNAKEWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASIC 265 +K +++ + R A+K G + ++ +L + A Sbjct: 3091 TRKMAEMAVADKDSVSAADLCRQLYRLGYVAEKLGKRDKALGCYEKAYELDATYLPALEG 3150 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLK 312 L+ + A + + I + H E + +I+ L + Sbjct: 3151 YGNLLVQTRRYEGALKVFQTI--LIHHREELTDLEVVEVYWQLGDIHAALNQTDRAQ--N 3206 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQ 369 + I+ +L + + + G +++ + + ++ R ++ L L +I + Sbjct: 3207 HFEKALAIDPGHEPTLRALVALLEKQGQYEKSAELRQQLVGVLEGEARAKVCLELGRIAR 3266 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 H+ + +AL + PD Sbjct: 3267 DELHDPYMAIDAFTNALKSQPD 3288 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 4/152 (2%) Query: 128 QIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLY-FESCRIGDLNSAQRYATKALDI 183 Q A + E + + + R + L + ++ D A + L I Sbjct: 848 QAAEDADSLDSYAEIIAELAEEGDVGSARLALLRELAEVQEKKLDDKAGAVKALRDLLAI 907 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P A+ + + +EW+ L + + E A L A L D Sbjct: 908 EPGNLDCLRALQRLHRAGEEWAALAEVLEKLAAASPEPAEQLAFLREAALLHETKLMDKE 967 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 ++ + S A+ + + Sbjct: 968 SAADAWRVIAERDPASREAAATLDRLYTESGR 999 >gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293] gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM 11293] Length = 820 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 35/250 (14%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 ++ Y A + + L+ + +L + G L A+R + I+P + Sbjct: 182 SLESQGDYEAAIREYKRSLKSRPGWPSGINNLGVALQKAGKLEEAERMFRDLVRIAPGSV 241 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + A + + + +A L ++ + + Sbjct: 242 KGNNNLGTVLAEQGKAEEAERCYRKAL--SLDAGYGKAALNLSSLKRETESPEEALKSIQ 299 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 A+ + + + + ++ I K KA VIL P Sbjct: 300 ALAAE--FPDDVALQLRFVQAYIDAGKVHKAGVIL------AP----------------- 334 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 L + + ++ E+ ++ +I + G + A LA+K P L Sbjct: 335 --------LLKNDPDNGEAHCLMGRIRRQQGKKELAEQHFKLALKKDPPAIEAWLHLAYM 386 Query: 369 QANSHNTDKI 378 + ++ Sbjct: 387 AKDGGEVEQA 396 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 81/277 (29%), Gaps = 34/277 (12%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD---ISPDAPWVTE 192 Y+ A + + + FA +L + A + L P + Sbjct: 121 YDEAIRYYRNAISLNPSFSFAYNNLGTIYESQDQTDRAITTYEEGLQYDTNHPTLRYNLG 180 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ ++ AI + K+ W I + +L+ A G + + + Sbjct: 181 ISLESQ---GDYEAAIREYKRSLKSRPGWPS--GINNLGVALQKA--GKLEEAERMFRDL 233 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEV------ILEKIWKVNPHPEIANIYTHLLSEN 306 +++ S+ + L Q K +AE L+ + + +E+ Sbjct: 234 VRIAPGSVKGNNNLGTVLAEQGKAEEAERCYRKALSLDAGYGKA---ALNLSSLKRETES 290 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLA 365 LK L + V + + ++ G + +A +K P L+ Sbjct: 291 PEEALKSIQALAAEFPDDVALQLRFVQAYIDAGKVHKAGVILAPLLKNDPDNGEAHCLMG 350 Query: 366 QIEQANS--------------HNTDKILYWTQSALHA 388 +I + + I W A A Sbjct: 351 RIRRQQGKKELAEQHFKLALKKDPPAIEAWLHLAYMA 387 >gi|186684862|ref|YP_001868058.1| hypothetical protein Npun_F4764 [Nostoc punctiforme PCC 73102] gi|186467314|gb|ACC83115.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 630 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 67/228 (29%), Gaps = 37/228 (16%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEA 193 Y A + LQ T VY + R GD A + + L ++P Sbjct: 323 DYEGAIADYDRALQENPT-LALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCD 381 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + AI ++ + A R + D+ + D +++ Sbjct: 382 RAAARRSLGDHKGAIKDYDRALQIND----QLAAAYYGRGIAREALKDLQGAIDDNTQAI 437 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L +++ ++ R+ LL + Sbjct: 438 ELVPEF-------SQAYCNRGNTRR-----------------------LLGDEQGAIADY 467 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L +IN + +E+ + + + A A A++I P+ F Sbjct: 468 NQAL-KINPDLIEAYYNRGSTHYALEAYESAIADYTQALQINPQSAAF 514 >gi|242035181|ref|XP_002464985.1| hypothetical protein SORBIDRAFT_01g029925 [Sorghum bicolor] gi|241918839|gb|EER91983.1| hypothetical protein SORBIDRAFT_01g029925 [Sorghum bicolor] Length = 1195 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 77/273 (28%), Gaps = 42/273 (15%) Query: 98 HNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA 151 + ARK+ + + N+ + + A + + P Sbjct: 45 GDGEEARKLRAAASEHFLAAAKLNPNDGVPFRFLGHHYAHGGDNQRAAKCYQRAVTLNPD 104 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 E +L G + +A SP A W + V ++WS AI L Sbjct: 105 DAEAG-ETLCDLLDVEGKESLELAVCKEAAGKSPRAFWAFRRLGYLQVHQRKWSEAIQSL 163 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + A L A L G A+ +++L + + A I + + Sbjct: 164 QNAIRGYPT----CADLWEALGLAYHRLGMFTAAVKSYGRAIELDSSRVFALIESGNIQL 219 Query: 272 SQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 RK ++ P H + Y L S +L+ Sbjct: 220 MLGYFRKGVEQFRSALEMAPCNH----SAYFGLAS----------------------ALL 253 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 ++ + +G+ A + A + I Sbjct: 254 AWARNCITIGAFGWAASLLKEASEA---SRICT 283 >gi|91093513|ref|XP_969441.1| PREDICTED: similar to tpr repeat nuclear phosphoprotein [Tribolium castaneum] gi|270002675|gb|EEZ99122.1| hypothetical protein TcasGA2_TC005228 [Tribolium castaneum] Length = 1187 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 103/332 (31%), Gaps = 34/332 (10%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + + + V L + A E L Sbjct: 166 LGKACIAYNKKDFRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQ---RYATKALDISPDAPWVTEAVVQQYVLAKEW 204 Q+ A+ L + S + + +KA I P V + + K++ Sbjct: 225 QLDPQCVGALVGLAILKLNLQQPESIRSGVQMLSKAYTIDSSNPMVLNHLANHFFFKKDY 284 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263 S+ + L + E RA + +GD ++ ++ + ++ Sbjct: 285 SK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPTAFVLPH 343 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317 + I + A EK+ K P + ++Y + S++ K ++ Sbjct: 344 FGLGQMYIYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLKKV 403 Query: 318 EEINKESVESLVIVSKIALEMGS-------IDQAHAKAMLAMKIA-PRKEI-------FL 362 E + +E+ + +++I LE A ++ P + + + Sbjct: 404 TEQFPDDIEAWIELAQI-LEQSDLQGSLNAYGTAIQILNKDVQADIPTEILNNVGALHYR 462 Query: 363 LLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393 L +E+A + + A A DP Sbjct: 463 L-NNLEEAKKNLEEA----LTRAKTEAEHDPQ 489 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 44/276 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + + Y+ A + Q T + L GD +A + K L P Sbjct: 312 ARAFHVQGDYDQAFQYYYQATQFAPTAFVLPHFGLGQMYIYRGDAENAAQCFEKVLKAQP 371 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMI 243 + + Y + S+ K + + A + +A+ LE +D + Sbjct: 372 GNYETMKILGSLYANSSSQSK-RDIAKNHLKKVTEQFPDDIEAWIELAQILEQSDLQGSL 430 Query: 244 ASYHDAIES-LKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 +Y AI+ K I I N +A+ LE+ Sbjct: 431 NAYGTAIQILNKDVQADIPTEILNNVGALHYRLNNLEEAKKNLEEA-------------- 476 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVI-----VSKIALEMGSIDQAHAKAMLAMKIA 355 L RA E + + S+ + ++++ + D++ +K Sbjct: 477 ----------LTRAKTEAEHDPQYYNSISVTITYNLARLNEALCLFDKSEKLYKDILKER 526 Query: 356 PRKEIFLL----LAQIEQANSHNTDKILYWTQSALH 387 P L +A+ + + + W + AL Sbjct: 527 PNYVDCYLRLGCMAR----DKGHIYEASDWFKEALR 558 >gi|168016027|ref|XP_001760551.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688248|gb|EDQ74626.1| predicted protein [Physcomitrella patens subsp. patens] Length = 503 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 14/272 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + + T A + R G+ A+ K L ++ + Sbjct: 105 GNTGKARKLFDAATAADRTHPAAWHGWAVLELREGNTKKARALLKKGLKFHGPNEYLLQT 164 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + V + +A + ++ + A +A +L A + + + + Sbjct: 165 LALLDVKMGRYDQARILFGKATRSNPKS----AASWLAWALMEASQERKTTARNLFKNGI 220 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLK 312 + + A + K +A + ++ ++NP P I Y + + Sbjct: 221 EASPKNRYVWQAWALFEAKEGNKERARQLFQRGQQLNPLDPVIYQSYGLFEYDCGHIAIA 280 Query: 313 R--ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK----EIFLLLAQ 366 + R + + + + + + + G++D A A+ + PR F Sbjct: 281 KQLFKRGVSVGPQHQPAWIAWAWVEWKEGNLDAARELFQRAIAVDPRSMDAVRAFQAWGI 340 Query: 367 IEQANSHNTDKILYWTQSALHAMPD--PLWIS 396 +E N + AL P W+S Sbjct: 341 LEDRE-GNVGVARVLFKRALRVDSQNVPTWMS 371 >gi|302037836|ref|YP_003798158.1| hypothetical protein NIDE2523 [Candidatus Nitrospira defluvii] gi|300605900|emb|CBK42233.1| conserved protein of unknown function, contains TPR repeats [Candidatus Nitrospira defluvii] Length = 567 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 42/294 (14%) Query: 104 RKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 R+ + + + LL E Q+ + + A +L+ + A++ L Sbjct: 6 RRRDEKLHGRQAGGADVSTALLREAQLHHQAGRLDEAERAYRSLLERAPAQPDALHGLGL 65 Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--W---------VTEAV--VQQYVLAKEWS---- 205 + R G+L A + KA P P W V V+ Y A +W+ Sbjct: 66 LTYRRGNLKDALGWLAKACAAGPRNPVYWFNHGVVLQRAGRTVDAVEAYGQAIQWNPRYI 125 Query: 206 RAITFLNQKKKN-AKEWNRNRAI------------LLIARSLENADKGDMIASYHDAIES 252 A T L K + + A + ++G + + + Sbjct: 126 EARTNLGNAYKELGRLADAQAAYEQVLTLNPDHAEAHNNLGVVLKEQGRLDEAAESYRRA 185 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENT 307 + L + A L+ Q + A E+ ++ P + + + E+ Sbjct: 186 IALKPSHAEAQNNLGLVLLEQGRLDDAIRCFERALQIVPGYGTALYNLGIAW--IWREDM 243 Query: 308 VGKLKRALRLEEINKES----VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L+ + E+ V S++ + + A +L + P Sbjct: 244 PRALRCFAETAQAKHAHGRPVTETAVFRSRLKHDAEQLQYLRACGLLGDEWNPY 297 >gi|149926302|ref|ZP_01914564.1| cellulose synthase operon protein C [Limnobacter sp. MED105] gi|149825120|gb|EDM84332.1| cellulose synthase operon protein C [Limnobacter sp. MED105] Length = 1322 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 78/235 (33%), Gaps = 27/235 (11%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K++ + Q++ + + V L+ A + + A ++ M P + V Sbjct: 407 DFQTAEKLYRALLQKNPNNADARVGLVL--TLSASGRADEAQRLIDSM---PESMVTGVG 461 Query: 159 SL--YFES---------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 L + R+G+ +A++Y + +P PW + + Y A Sbjct: 462 GLDKLRSAIAYENGKRELRLGNEAAARQYFEDTVAFNPAYPWARVELARLYHAQGRKDEA 521 Query: 208 ITFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASY--HDAIESLKLCDNSIM--- 261 ++ + A + + + + + D + + +L Sbjct: 522 RALIDPLTSIDNVPEESLYAAAVFYSEIGDNAGAAAVLARIPKDELTTDQLALTQRTEFR 581 Query: 262 ASICAAKSLISQNKKRKAEVILEK-IWKVNPHPE----IANIYTHLLSENTVGKL 311 A + A +L +K A+ +L P+ +A+ Y + +L Sbjct: 582 AVLDQAATLNKLGRKSDAQRLLSSLERDAADKPDLMLQLASEYAEGGDIDNATRL 636 >gi|124024786|ref|YP_001013902.1| hypothetical protein NATL1_00731 [Prochlorococcus marinus str. NATL1A] gi|123959854|gb|ABM74637.1| Hypothetical protein NATL1_00731 [Prochlorococcus marinus str. NATL1A] Length = 816 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 94/269 (34%), Gaps = 19/269 (7%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPAT 152 A NI A K + Y Q L +L+ A +++ Sbjct: 56 AQGNIQKAAKYYQYFIDQGFKDPRVLANYGVILKG-----FGNSQEAELLYRKAIELNPN 110 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A Y+L +G L A+ KA++ISP+ + + + + Sbjct: 111 FADAHYNLGNTLRDLGKLKEAELSYRKAIEISPNY---ANTLYNLGTILSD-LGKLQDAE 166 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + A N N D G + + +++K+ N L Sbjct: 167 FSYRQAIIINPNYTEAHYNLGNTLRDLGKLKDAELSYRKAIKISPNYAKVHCNLGTILRD 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRAL----RLEEINKESVES 327 K + AE+ K ++N P+ A Y++L + + +G LK A + E+ + E+ Sbjct: 227 LGKLKDAELYTRKAIQLN--PDFAEAYSNLGNILSDLGNLKEAEISQKKTIELKPDCAEA 284 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + I ++G + A A++I+P Sbjct: 285 HSNLGNILRDLGKLKDAELSYRKAIEISP 313 >gi|113476446|ref|YP_722507.1| sulfotransferase [Trichodesmium erythraeum IMS101] gi|110167494|gb|ABG52034.1| sulfotransferase [Trichodesmium erythraeum IMS101] Length = 681 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 93/247 (37%), Gaps = 23/247 (9%) Query: 127 VQIALAERQYNIAHEK-LEMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDIS 184 + +LA+ + + A+ L+ + P A ++ GD+ +A+ Y KA+ I Sbjct: 18 AESSLAQGKLDEAYAACLKALNSQPE--FAPAYKTIGNILQVKGDIEAAKNYYFKAITIF 75 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 PD + Y ++W +A F QK + K N AI+ + Sbjct: 76 PDFAEAHANIGSMYAKQRDWEKAF-FYYQKAIHIKP---NLAIVYRNLAKVCECTEKEEL 131 Query: 245 SYHDAIESLKLCDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + ++L L S A K L+ NK A K+N P ++ Y +L Sbjct: 132 ATEYTYKALILEPESATAIEHLNIGKKLLELNKIEAAIKCYRNAVKIN--PNLSAGYQNL 189 Query: 303 LS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 E+ + L+ ++++ N ++ ++ + G A + A+++ Sbjct: 190 GELLVKNGELESALIALREGIKIDAKNPRCY---YLLGEVWQKQGQYKLAISDYSRAIEL 246 Query: 355 APRKEIF 361 P +F Sbjct: 247 KPENHLF 253 Score = 43.4 bits (101), Expect = 0.088, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 67/203 (33%), Gaps = 24/203 (11%) Query: 65 FLSCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 A + + + GY+ L G + + + A + + N Sbjct: 162 LNKIEAAIKCYRNAVKINPNLSAGYQNL--GELLVKNGELESAL-IALREGIKIDAKNPR 218 Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESC-----RIGDLNSAQ 174 YLL ++ + QY +A + P L+ + ++G L+ A Sbjct: 219 CYYLL-GEVWQKQGQYKLAISDYSRAIELKPEN------HLFHKKLGDVWEKMGKLDVAI 271 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KA++I+P+ W ++ Y ++W +AI ++ ++ + Sbjct: 272 SCYEKAIEINPNFFWSYHSLGNVYTKQQKWDKAIAAYDKATIINPNFSN----TYYNLAD 327 Query: 235 ENADKGDMIASYHDAIESLKLCD 257 + +E+++L Sbjct: 328 AFLHNSQKEEAIITYLEAIRLRP 350 >gi|325499086|gb|EGC96945.1| cellulose synthase subunit BcsC [Escherichia fergusonii ECD227] Length = 1157 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 16/256 (6%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 357 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416 Query: 186 DAPWVTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + Y A+ + +++ ++ + E + L ++ ++G Sbjct: 417 GNTNAVRGLANIYRQQSPEKAEAYIASLSVSQRRSIDDIERSLQNDRLA-QQAEALENQG 475 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIY 299 + + L L S+ + ++ L ++ +A+ ++ + + P+ PE Y Sbjct: 476 KWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAY 535 Query: 300 THLLSENTVGK--LKRALRL--EEINKESVE--SLV---IVSKIALEMGSIDQAHAKAML 350 LS + + L L + N E + + V + A + + + Sbjct: 536 GLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRENGKEAEAEAM 595 Query: 351 AMKIAPRKEIFLLLAQ 366 + P I L LA Sbjct: 596 LRQQPPSSRIDLTLAD 611 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 257 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 311 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 312 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 371 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 372 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 415 >gi|313230744|emb|CBY08142.1| unnamed protein product [Oikopleura dioica] Length = 885 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 98/292 (33%), Gaps = 39/292 (13%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNI----AHEKLEMMLQIPATRE 154 A K++ + LV L Q + A + E L+I T E Sbjct: 611 YEEAIKVYEQAIALEPLNPNPLVNLAWVKQTLGISSGSSRMVRDAEQLYEQSLRIKPTSE 670 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFL 211 + L + G+ + A +A + P V++Q V A E RA+ L Sbjct: 671 AFMR-LGSLKYQRGETSEANLEYEEARKLDP---ENHMIVLEQSIVLVSAGETERALEIL 726 Query: 212 NQKKKNAKEWNRNRAILLIA-----RSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 K+ + +A R + ++ + H IE K D A Sbjct: 727 QVAVSKDKDCKLANLHITLAKIYGPRKHQFMKAASVLENCHREIEENKHEDE------IA 780 Query: 267 AKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A R + + NP + + T+ L+ A++L Sbjct: 781 ADIKFQLGAMYHEIVRNNQNV------SNPTKN-EEAFLAKAKQKTLELLQEAIKL---K 830 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANS 372 VE V+++++ L G++ +K+ P E+ +L ++++A S Sbjct: 831 PGDVEYRVLLAQVHLRSGNLKDGTHVLKTILKLKPDHEVATILLNRVKEAES 882 >gi|325110736|ref|YP_004271804.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM 5305] gi|324971004|gb|ADY61782.1| hypothetical protein Plabr_4209 [Planctomyces brasiliensis DSM 5305] Length = 526 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 5/136 (3%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL-YFESCRIG-DLNSAQR 175 +V+ + A A + + + +L + + DL+ A Sbjct: 379 PEMVHFVLGSAAYRRSDLKAAERHWDLAFAKSGKLTPLLLNNLAMVYAEQAEPDLDHALE 438 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A +A+++ P + Q + +W AI L+ + NR + + L+A++ E Sbjct: 439 LANQAVEVVPQLAEFRDTRGQIHAKRGDWKSAI--LDLQIVVRHFPNRKQVLELLAKAYE 496 Query: 236 NADKGDMIASYHDAIE 251 D+ A+Y +E Sbjct: 497 ELGDNDVAAAYRRRVE 512 >gi|171057178|ref|YP_001789527.1| TPR repeat-containing protein [Leptothrix cholodnii SP-6] gi|170774623|gb|ACB32762.1| Tetratricopeptide TPR_2 repeat protein [Leptothrix cholodnii SP-6] Length = 566 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 10/236 (4%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 ++ R + SA KAL I P E + + A L K + Sbjct: 5 LLQAGRHDEAESAY---RKALQIKPLHARAQEGLGLVLLRIGRLEEAFLHLEAAHKVEPD 61 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 A +L L + + G++ + +++ + A + Q + + Sbjct: 62 ----NAEILTHWGLVDLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSI 117 Query: 281 VILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +L K ++ P +A +E L A + E ++ V+++ + + Sbjct: 118 ELLRKAIEIRPQHGLAYSNLAMALRRAERLDDALDAARKATEYKADNARVWVVLADVQMN 177 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +G D A A I P+ + A + + + AL PD Sbjct: 178 LGDFDAAGQSLERATAIDPQHVGTFVGLGKRHAATGDPTRSREAYTRALQLNPDSA 233 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 54/165 (32%), Gaps = 6/165 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A K ++ A ++L + + G ++++ KA++I P Sbjct: 77 GNLGNAAGKFHRAIERDPRNPHAWHNLGLVALKQGQVDTSIELLRKAIEIRPQHGLAYSN 136 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A+ A+ + + + R +L + + GD A+ + Sbjct: 137 LAMALRRAERLDDALDAARKATEYKADNARVWVVL----ADVQMNLGDFDAAGQSLERAT 192 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + + K + ++ + ++N P+ A+ Sbjct: 193 AIDPQHVGTFVGLGKRHAATGDPTRSREAYTRALQLN--PDSADA 235 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 91 GLMSIAAHN-IPLARKMHSYVSQQ----HTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 GL+ + N A K H + + H +HN LV AL + Q + + E L Sbjct: 70 GLVDLEMGNLGNAAGKFHRAIERDPRNPHAWHNLGLV-------ALKQGQVDTSIELLRK 122 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ++I A +L R L+ A A KA + D V + + ++ Sbjct: 123 AIEIRPQHGLAYSNLAMALRRAERLDDALDAARKATEYKADNARVWVVLADVQMNLGDFD 182 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A L + + +A GD S +L+L +S A Sbjct: 183 AAGQSLERATAIDP----QHVGTFVGLGKRHAATGDPTRSREAYTRALQLNPDSADA 235 >gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1270 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 96/312 (30%), Gaps = 49/312 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAP--- 188 A +++ A + ++ DL A T+AL + P Sbjct: 444 GDAQGAAADFSEVIKRDPQDGEAYFNRGVAR--VQLSDLQGAVEDYTQALQLDPRHGKAY 501 Query: 189 ----WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIARSLENADKGDMI 243 +A+ +++S+A++ + + E +A L + R++ + Sbjct: 502 YHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMAYLSSNTLE 561 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + D ++L+L N +++ + + R+ Sbjct: 562 PALADCEQALRLDPNL-------SRAYLCRGLARQGL----------------------- 591 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFL 362 + G L R E++ + ++ + L++G+I+ A + A+ + P + Sbjct: 592 -GDPGGALADFNRALELDPQMAKAYLNRGIAHLDLGNIEAALSDLNQAIALDPQDASAYS 650 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYFE 419 +I + +T + +P + G L + W + + Sbjct: 651 SRGRIHWLLGDPLAALRDYTAALERDPQNPQLYFNRGQLHAEREDWPAACEDFSQV--LQ 708 Query: 420 WKIPTKSPEYIS 431 W P Sbjct: 709 WAARPGIPRGPE 720 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 95/297 (31%), Gaps = 26/297 (8%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G + + A + ++ ++ +Y Q+ + A E +LQ Sbjct: 651 SRGRIHWLLGDPLAALRDYTAALERD--PQNPQLYFNRGQLHAEREDWPAACEDFSQVLQ 708 Query: 149 ------IPATREFAV-----YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 IP E + + + R+GD A +AL P + Q Sbjct: 709 WAARPGIPRGPELLLNAHLRRGMARQ--RLGDWQGALADFDQALQGDPQSGLAYFHRGQV 766 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + AI +Q +AR+ GD+ A+ E+++L Sbjct: 767 RAALGDGLGAIQDYHQALALGVAVAEADIRRDLARA--QIQTGDLQAALEQLNEAVRLQP 824 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKR 313 A+ + +A +++ + +P + + H N ++ Sbjct: 825 ERRDLRQERAELCRQLGRWPEAIADYDEVLRQDPQ-DWTAWLGRGMAHGQVGNWDSAIQD 883 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 R+ + + + E+L + ++G + A ++ P+ +A++ + Sbjct: 884 LSRVLQQDPDHREALWHRGQALQQLGQTEAALQDLNRLLQRDPQHR----MARLARG 936 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 51/167 (30%), Gaps = 11/167 (6%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-----IPA---TREFAVYSLYFESCRIGDLNSA 173 +L Q+ A + +L+ P T L + GDL A Sbjct: 998 AHLKRAQVRRLRHNLEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQ--ERGDLAGA 1055 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 T + P A ++ + A+ L+Q ++W A L + Sbjct: 1056 LADFTALIQQQPQASQAFALRATVHLALGDQEMALADLDQALSLDRDWGVANAALAYRQR 1115 Query: 234 LENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + + + D ++L L A + A + + KA Sbjct: 1116 GDLHRQANCPELAIADYTQALALNPQEHSALLHRALLWDGEGQTDKA 1162 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 56/198 (28%), Gaps = 16/198 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G+ + A + + L Y Q+ A A + L Sbjct: 727 LRRGMARQRLGDWQGA--LADFDQALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQAL 784 Query: 148 Q------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 R L + GDL +A +A+ + P+ + + + Sbjct: 785 ALGVAVAEADIR----RDLARAQIQTGDLQAALEQLNEAVRLQPERRDLRQERAELCRQL 840 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 W AI ++ + + R + + G+ ++ D L+ + Sbjct: 841 GRWPEAIADYDEVLRQDP----QDWTAWLGRGMAHGQVGNWDSAIQDLSRVLQQDPDHRE 896 Query: 262 ASICAAKSLISQNKKRKA 279 A ++L + A Sbjct: 897 ALWHRGQALQQLGQTEAA 914 >gi|317048291|ref|YP_004115939.1| tetratricopeptide repeat-containing protein [Pantoea sp. At-9b] gi|316949908|gb|ADU69383.1| tetratricopeptide repeat protein [Pantoea sp. At-9b] Length = 389 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 79/254 (31%), Gaps = 37/254 (14%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R AV L + G + A+ IS Sbjct: 83 GEVDRAIRIHQSLMESASLSYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLVDETDFRIS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W +AI + K K+ + A +L+ D+ Sbjct: 143 -----ALQQLLLIHQATSDWQQAIEVAEKLVKLGKDKQKGEIAHFYCELALQALSSDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297 + + S SI + + Q + KA + +LE K P + Sbjct: 198 RAMTLLKKGEAADRQSARVSIMTGRIFMEQGEYTKAVERLQRVLEQDKELVSEALPMLET 257 Query: 298 IYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLA 351 Y L E L+R + E+ V+++ L + A Sbjct: 258 CYQRLNQPEQWAQFLQRCV---------DENTGAVAELYLADILEQQQGPEAAQLYINRQ 308 Query: 352 MKIAPRKEIF-LLL 364 ++ P +F L+ Sbjct: 309 LQRHPTMRVFHRLM 322 >gi|224002959|ref|XP_002291151.1| RNA splicing factor [Thalassiosira pseudonana CCMP1335] gi|220972927|gb|EED91258.1| RNA splicing factor [Thalassiosira pseudonana CCMP1335] Length = 935 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 60/350 (17%), Positives = 120/350 (34%), Gaps = 61/350 (17%) Query: 97 AHNIPLARKMHSYVSQQHTFHNE----YLVYLLEVQIALAERQYNIAHEKLEMML----Q 148 A + A ++ + + + L +Q ER++ A E++ + Sbjct: 520 ADDANAALSRNAVATARAILAHSLAAFPTKRGLWLQAVDLERKHGTASSLDEVLAAASER 579 Query: 149 IPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 +P T + V E GD++S++ T+A +PD+ V A V+ E RA Sbjct: 580 LPRTEIFWLVR--AKEKWLAGDVDSSRNILTEAFKANPDSEPVWLAAVKLEWETGEIERA 637 Query: 208 ITFLNQKKKNAKEWNRNRAILLIAR-------SLENADKG-------------------- 240 L + ++ A L+ R +L+ ++G Sbjct: 638 QKLLERARERAPTARIFMKSALLERECGNFDGALDLLEQGILRYPTFAKMYMMGGQICSE 697 Query: 241 -------DMIASYHDAIESLKLCDNSIMASICAAKSL---------ISQNKKRKAEVILE 284 + + L+ C S++ A++ + KA +LE Sbjct: 698 DLKKDRESLDRARKFYQRGLQNCPKSVVLWCLASRLEEKVADYGAGSASAGVTKARSLLE 757 Query: 285 KIWKVNPHPEIANIYTH-LLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSID 342 N P+ A ++ + E G K A+ L +E S +++++ + Sbjct: 758 LARLKN--PKNAELWVEAIRLERRAGNDKLAVSLMARALQECPSSGLLLAE-NISTSPRV 814 Query: 343 QAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + +K+ A+K P + +A + DK W + A+ PD Sbjct: 815 EQKSKSADAIKRCPDDPRVITAVADLFAGERK-HDKARKWFERAVILDPD 863 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 24/229 (10%) Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + +GD+N A+ D +P W+ A V++ A + +A + + + + Sbjct: 261 AAEVGDVNKARLLLKSVRDTNPKHGPGWIAAARVEE--AAGKTVQARKLIMEGCETCPDS 318 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L A L D+ I + + + S+ + AA + + +KA Sbjct: 319 ED---VWLEAARLHPQDQAKTILA-----AAARRLPTSVKVFLRAADLE-AHDSSKKA-- 367 Query: 282 ILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +L K + NP + L + L E SVE + ++++ S Sbjct: 368 VLRKALEANPTSVTLWKAAVDLEDADDARIL--LSVAVEKVPHSVEMWLALARL----ES 421 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQANSHNTDKILYWTQSALHA 388 + A A K P + + A +E++ +H A+ + Sbjct: 422 YENARKVLNQARKQLPTERAVWIAAAKLEESQNHGDMVDRI-VDKAVRS 469 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 68/186 (36%), Gaps = 17/186 (9%) Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + + ++A L K+ ++ N IA + G + + + Sbjct: 254 SNTKIASAAEVGDVNKARLLL----KSVRDTNPKHGPGWIAAARVEEAAGKTVQARKLIM 309 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 E + C +S + AA+ +A+ IL + P ++ Sbjct: 310 EGCETCPDSEDVWLEAARLHPQD----QAKTILAAAARRLPT--SVKVFLRAADLEAHDS 363 Query: 311 LKRA--LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367 K+A + E N + V + K A+++ D A +A++ P E++L LA++ Sbjct: 364 SKKAVLRKALEANP----TSVTLWKAAVDLEDADDARILLSVAVEKVPHSVEMWLALARL 419 Query: 368 EQANSH 373 E + Sbjct: 420 ESYENA 425 >gi|158522757|ref|YP_001530627.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511583|gb|ABW68550.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 248 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 54/139 (38%), Gaps = 7/139 (5%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + + A KA+ + PD + Y+ +EW +AI L ++ + Sbjct: 75 RKEFDMAIESYKKAIALKPDFATAINNLGVLYMEKEEWDKAIITLTPISESFIYATPHFP 134 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L+ ++ + K + + ++L+L + + A K+ ++ + +A ILE Sbjct: 135 NFLLGQAYYH--KKEYAKAVEKFQKALELQPDYVFAGHWLGKTYMAMGQAPRAVKILENT 192 Query: 287 WKVNP-----HPEIANIYT 300 + P H ++ Y Sbjct: 193 VEKGPAVAVFHLDLGRAYR 211 >gi|108756867|ref|YP_632729.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108460747|gb|ABF85932.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 838 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 90/296 (30%), Gaps = 32/296 (10%) Query: 98 HNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF 155 + R K + + Q N++ ++ L + + A + P + Sbjct: 173 GDAAATRLKRYLALRPQALAPNDFQIHELLGRAHVLRGDAAAARASFQQAQAGRPESPSV 232 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L G A+ P A E + + Y+ A + ++A T Sbjct: 233 QL-GLAQVLELEGRAVEARTLLEGVTTRFPQAGDAREKLARLYLGAGDVAKADTQAQAVM 291 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + + + A+ + + L+L ++ + K+L +Q + Sbjct: 292 KLGSSP-----AAHLLLGDVRFAQKNAAAAEAEYRKVLQLQPGLVLGQMAVGKALQAQGR 346 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRA----LRLEEINKESVESLVI 330 +A LE + ++ +L S G+ +RA R+ E+ V+ Sbjct: 347 HEEAIQFLEGAVRAGA--NSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQALGYVL 404 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + G DQA A+++ P W AL Sbjct: 405 LGADHFATGQWDQAIEDYANALQVEP-----------------EHAGAKQWLARAL 443 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 15/243 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A+ ++ A + LE ++ A +L + R G A + ++++P Sbjct: 340 ALQAQGRHEEAIQFLEGAVRAGANSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQA 399 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + +W +AI + E + L A + D+ D Sbjct: 400 LGYVLLGADHFATGQWDQAIEDYANALQVEPEHAGAKQWLARALAHRARDRAGTGR-LED 458 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRK---AEVILE-------KIWKVNPHPEIANI 298 A+ L+ + + A + S + R A ++E W+ + + Sbjct: 459 AVRDLRRAYDLDRGAPMARRLGASLLETRAYADARKVMEQGVMLPGAAWRDS----LLLG 514 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 Y L + + L+ R +E E AL + Q A + P + Sbjct: 515 YARLATNDAQAALEAFNRAAAQTEEPDEQAEASVGAALAEVELGQVDAAVQRLTAVGPSR 574 Query: 359 EIF 361 Sbjct: 575 AAA 577 >gi|85373893|ref|YP_457955.1| TPR repeat-containing protein [Erythrobacter litoralis HTCC2594] gi|84786976|gb|ABC63158.1| TPR repeat-containing protein [Erythrobacter litoralis HTCC2594] Length = 594 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 73/274 (26%), Gaps = 12/274 (4%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 ++T L AL + A L ML R L G Sbjct: 22 AACSENTPEQPPLER---AIAALEDGDGFGAELILRKMLADGVERSAISAFLGEAELIQG 78 Query: 169 DLNSAQR-YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 A+R A A + A + + + A ++ + R Sbjct: 79 QPAEARRWLAEGAFTDA-TAGRGFHMLGRLEMREGNLPAAGQAFDRAIAFIPDDPR---- 133 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L G+ + A ++KL + A + A+ + A E+ Sbjct: 134 LWTDIGRLRYRGGEQGLAVDAAEHAVKLGPENSEALLFMAQLTRDSHGMAAALPWFERAI 193 Query: 288 KVNP-HPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ Y L + L + N + S + + +A G D A Sbjct: 194 AAKPDQLDLMAEYAATLGDAGEAQEALAVIRDIASRNPGYLRSYYLQAVLAARAGQYDLA 253 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + +LL+ I + N Sbjct: 254 RKLLFRSGGFVNDTPAGILLSGIIDLETGNFASA 287 >gi|308388548|gb|ADO30868.1| hypothetical protein NMBB_0379 [Neisseria meningitidis alpha710] Length = 402 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 50/356 (14%), Positives = 111/356 (31%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ + QQ ++ L ++ + + A ML P T Sbjct: 70 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 124 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 125 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 181 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + + A+E+ K C Sbjct: 182 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 241 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 242 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 291 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 292 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 343 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 ++ A + D + L ++ + + S W P F Sbjct: 344 DLDPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395 >gi|261340022|ref|ZP_05967880.1| tetratricopeptide repeat protein [Enterobacter cancerogenus ATCC 35316] gi|288317942|gb|EFC56880.1| tetratricopeptide repeat protein [Enterobacter cancerogenus ATCC 35316] Length = 389 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 15/160 (9%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R AV L + G + A+ IS Sbjct: 83 GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFMQLVDETDFRIS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++Q Y +W +AI + K K+ R A +L+ DM Sbjct: 143 -----ALQQLLQIYQATSDWQKAIDTAERLVKLGKDKQRVEIAHFYCELALQQMGNDDMD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + NS SI + ++ KA L Sbjct: 198 KAMALLKKGAAADRNSARISIMMGRVFMASGDYTKAVESL 237 >gi|242765435|ref|XP_002340974.1| mRNA splicing factor (Prp1/Zer1), putative [Talaromyces stipitatus ATCC 10500] gi|218724170|gb|EED23587.1| mRNA splicing factor (Prp1/Zer1), putative [Talaromyces stipitatus ATCC 10500] Length = 941 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 113/335 (33%), Gaps = 47/335 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SIA AR +++Y + L A ER + +++ + Sbjct: 551 SIAHGKYETARAIYAYALRVFVTSK---TLWLAA--ADLERNHGTKEALWQVLEKAVEAC 605 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + + L E + ++++A+ +A + +P+ + A V+ AKE A Sbjct: 606 PQSEVLWMQ-LAKEKWQASEIDNARLVLKRAFERNPNNEDIWLAAVKLETDAKETEHARE 664 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240 L+ ++ A + R L N D+ Sbjct: 665 LLSTARREAGTDRVWIKSVAFERQLGNMDEALDLVNQGLQLYPKADKLWMMKGQIYESQK 724 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + C S+ + A++ K+ IL++ P+ A ++T Sbjct: 725 KYPQAREAYGTGTRACPQSVPLWLLASRLEEKAGVVVKSRSILDRARLAV--PKNAELWT 782 Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356 + E + +A L +E S ++ ++ LE + + + K+ Sbjct: 783 ESVRVERRANNISQAKVLMAKALQEVPNSGLLWAESIWHLEPRTHRKPRS-LEAIKKVDN 841 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F+ +A+I +K + W + A+ A D Sbjct: 842 DPILFVTVARIFWDERR-LEKAMTWFEKAILADSD 875 >gi|158521589|ref|YP_001529459.1| TPR repeat-containing serine/threonin protein kinase [Desulfococcus oleovorans Hxd3] gi|158510415|gb|ABW67382.1| serine/threonine protein kinase with TPR repeats [Desulfococcus oleovorans Hxd3] Length = 602 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 78/270 (28%), Gaps = 12/270 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL A P+A +M + + L + + L + + A ML Sbjct: 259 GLEHFIAALAPIASRMQARPPEPPVMDAGTLTRA-DAEKFLRAGRPDRAIAVYRDMLTRN 317 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + L R G +A R+ A+ ++ + + + + + A+ Sbjct: 318 PADFQCHHRLGGILYRQGRFQAAIRHLQAAIAVNNQQAELHKDLGRALSRTGQNENAVAA 377 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + +L+ + + A+ +L S+ A A + Sbjct: 378 FQKALALNPD----NLSILLDLGRQYNRQKQPEAAEPYFARALAAHPTSLAAYNGLAHTK 433 Query: 271 ISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 K +A + +K + P H + + + + T + Sbjct: 434 QVLGKTAEAITLFQKALALAPDQPELHYNLGTAHLAI--QETAAAESCFAAALRLKPGFA 491 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + I L + QA A+ Sbjct: 492 AAHHAMGNICLAAKNPVQAAVHLKAALAAD 521 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 54/197 (27%), Gaps = 11/197 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G + A L +P + + AI L N Sbjct: 298 LRAGRPDRAIAVYRDMLTRNPADFQCHHRLGGILYRQGRFQAAIRHLQAAIA----VNNQ 353 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A L + G + ++L L +++ + + Q + AE Sbjct: 354 QAELHKDLGRALSRTGQNENAVAAFQKALALNPDNLSILLDLGRQYNRQKQPEAAEPYFA 413 Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + + HP Y L T + + + + E + L + Sbjct: 414 RA--LAAHPTSLAAYNGLAHTKQVLGKTAEAITLFQKALALAPDQPELHYNLGTAHLAIQ 471 Query: 340 SIDQAHAKAMLAMKIAP 356 A + A+++ P Sbjct: 472 ETAAAESCFAAALRLKP 488 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 70/234 (29%), Gaps = 11/234 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A + L + + L + R +A+ Y +AL P Sbjct: 362 GRALSRTGQNENAVAAFQKALALNPDNLSILLDLGRQYNRQKQPEAAEPYFARALAAHPT 421 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + + + AIT + A + L A + + A+ Sbjct: 422 SLAAYNGLAHTKQVLGKTAEAITLFQKALALAPDQPELHYNLGTA----HLAIQETAAAE 477 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIYTH 301 +L+L A ++ +A V L+ + ++ Sbjct: 478 SCFAAALRLKPGFAAAHHAMGNICLAAKNPVQAAVHLKAALAADGSGVSALYDLGRACR- 536 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + G + R + + + + ++++ G + A +A ++ Sbjct: 537 -MQNDLDGAVSAFGRYLKFAAKDTTAYLALAEVLEAQGKQEAAGKYRRMAEELN 589 >gi|147919208|ref|YP_687057.1| hypothetical protein RCIX2687 [uncultured methanogenic archaeon RC-I] gi|110622453|emb|CAJ37731.1| hypothetical protein RCIX2687 [uncultured methanogenic archaeon RC-I] Length = 348 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 75/191 (39%), Gaps = 21/191 (10%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ P A+ Y + +S A+ L + K + A + + + Sbjct: 16 EQAVKTRPGDADARRALGLAYGIKGRYSDAVRELEEAAKLRPDS----AEIHYSLGIAYD 71 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE-- 294 G+ + + ++++L D+ + A + A +L A + ++ K P+ PE Sbjct: 72 ALGETKKASQEFRKAVELKDDYVEARLSLAITLNELGLVDDALPVFTELVKQAPNLPEAR 131 Query: 295 -------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 +A Y ++ + L+ A++L N E ++ ++++ + G + +A Sbjct: 132 VGFAISLMAAGYL----DDAIEMLQEAVKL---NPEYFDAYMLLAGAYADKGDLREAENA 184 Query: 348 AMLAMKIAPRK 358 A+K P Sbjct: 185 YKQAVKANPSS 195 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 84/235 (35%), Gaps = 13/235 (5%) Query: 129 IALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + +Y+ A E E P + E YSL +G+ A + KA+++ D Sbjct: 35 AYGIKGRYSDAVRELEEAAKLRPDSAEI-HYSLGIAYDALGETKKASQEFRKAVELKDDY 93 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 ++ A+ + K A R ++ G + + Sbjct: 94 VEARLSLAITLNELGLVDDALPVFTELVKQAPNLPEARV----GFAISLMAAGYLDDAIE 149 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSEN 306 E++KL A + A + + R+AE ++ K NP P+ Y ++++ Sbjct: 150 MLQEAVKLNPEYFDAYMLLAGAYADKGDLREAENAYKQAVKANPSSPD--AYYNLAVTQS 207 Query: 307 TVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L A++ I + +E+ + + + G +D+A + + + P Sbjct: 208 ERNLLTEAIQNYRIAIQHSPDFLEAHYNLGLLLDDKGLVDEAIREYETTLDLDPD 262 >gi|75906889|ref|YP_321185.1| hypothetical protein Ava_0666 [Anabaena variabilis ATCC 29413] gi|75700614|gb|ABA20290.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 293 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 47/145 (32%), Gaps = 16/145 (11%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------- 176 +L Q A +L A+ + +A Sbjct: 121 VLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGMVVLLLDQQRPEAAVGLLQDTLTN 180 Query: 177 ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIAR 232 A +A I P + + ++ + K + +AI+ +Q +K+ K++ ++A+ Sbjct: 181 ANQANTIQPGSVDVVAVQVLLGNVHAAQKRYPQAISAFDQAIQKDTKDFRP-----VLAK 235 Query: 233 SLENADKGDMIASYHDAIESLKLCD 257 ++ +G + +L L Sbjct: 236 AMLLKQQGKASEAKPLFDSALALAP 260 >gi|20090792|ref|NP_616867.1| hypothetical protein MA1943 [Methanosarcina acetivorans C2A] gi|19915855|gb|AAM05347.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 429 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 51/170 (30%), Gaps = 15/170 (8%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+G A + KAL +P A + +I + K + R Sbjct: 152 RLGQHEKALEASEKALTSNPKLAGAWHAKGTVLADLGRYEESIRAYDSALKINPKLAR-- 209 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++ + + +L++ ++ + A + K +KA K Sbjct: 210 --AWEGKAFALCSLDRPVEAIIAYDSALQINPDNAKTWVGKALVHLKLGKYKKALEPCNK 267 Query: 286 IWKVNPHPEIANIY-------THLLSENTVGKLKRALRLEEINKESVESL 328 + P++A + L ++ L R I + ++ Sbjct: 268 AISIK--PDLAEAWYCKGMILAGLEKDDEA--LGAFERALRIRPDYPDAR 313 >gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 847 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 9/202 (4%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L R G+ +A +A++I+P+ + + AI N+ + Sbjct: 429 RGL--THRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEI 486 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A+ R + +G+ A+ D ++++ N +A + Q Sbjct: 487 NPNY----ALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYE 542 Query: 278 KAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 A + ++NP+ +A + H N + R EIN + Sbjct: 543 AAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFA 602 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 G+ A A A++I P Sbjct: 603 HRSQGNYKAAIADYNRAIEINP 624 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 82/270 (30%), Gaps = 9/270 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G N A + Y N L Y + Y A ++I Sbjct: 463 RGFAHRRQGNYEAA--IADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEI 520 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A R G+ +A +A++I+P+ + + AI Sbjct: 521 NPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIA 580 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 N+ + + A+ R + +G+ A+ D ++++ N A + Sbjct: 581 DYNRAIEINPNY----ALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFA 636 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVE 326 SQ A + ++NP+ A + H N + R EIN Sbjct: 637 HRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHN 696 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + G+ + A A A++I P Sbjct: 697 AYNNRGFAHRSQGNYEAAIADYNRAIEINP 726 >gi|40063713|gb|AAR38494.1| TPR repeat protein [uncultured marine bacterium 583] Length = 1120 Score = 47.6 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 11/162 (6%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G L++A + KAL I PD V + + A+ Q ++ A Sbjct: 626 GQLDTAIKRYEKALVIKPDYAEVHNNLGIALKDLGQRDTAVKSFEQALAIKPDY----AE 681 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + G + +++ + + A +L ++ A E+ Sbjct: 682 AHNNLGVTLQELGQHDTAVKSYEQAIAIKPDYAEAHNNLGNALRELDQLDAALKSYEQAI 741 Query: 288 KVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 +NP H + + L +T +K + I + Sbjct: 742 VINPEYAVAHYNLGIVLKELGQRDTA--VKSFEKALAIKPDY 781 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 81/278 (29%), Gaps = 39/278 (14%) Query: 92 LMSIAA-HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 ++++ + I A + + +E L++ + + Q + + + E Sbjct: 16 VIALYSNGQIHEALDAVEALIKDD--PHEPLLFNISGACYVGLGQLDESVTRYE------ 67 Query: 151 ATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 R A+ Y E+ +G ++A + +AL I PD + Sbjct: 68 --RAIAIKPDYVEAHNNLGNVLKELGQRDTAVKSFEQALAIKPDYAEAHNNLGVTLQELG 125 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A+ Q ++ A + D G + S ++L + + A Sbjct: 126 QLDAAVKCYEQALAIKPDY----AEAHNNLGVTLQDLGQVDRSIKSLNKALAIKPDYAQA 181 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 S + + A E+ + P+ A + L + + Sbjct: 182 RNNLGVSFQERGQIDGAVKQYEQAVAIK--PDYA---------SAHHNLSVLKKYTASDP 230 Query: 323 ESVESLVIVSKIALEMGS-----IDQAHAKAMLAMKIA 355 + + ++S L A L + Sbjct: 231 QITQMQSLLSTSNLSQSDRIHLCFALARVYENLGKQDE 268 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 4/127 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Q + A + E L I A +L +G ++A + +A+ I PD Sbjct: 660 GQRDTAVKSFEQALAIKPDYAEAHNNLGVTLQELGQHDTAVKSYEQAIAIKPDYAEAHNN 719 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A+ Q E+ A+ + + G + ++L Sbjct: 720 LGNALRELDQLDAALKSYEQAIVINPEY----AVAHYNLGIVLKELGQRDTAVKSFEKAL 775 Query: 254 KLCDNSI 260 + + + Sbjct: 776 AIKPDYV 782 >gi|225025183|ref|ZP_03714375.1| hypothetical protein EIKCOROL_02077 [Eikenella corrodens ATCC 23834] gi|224942042|gb|EEG23251.1| hypothetical protein EIKCOROL_02077 [Eikenella corrodens ATCC 23834] Length = 392 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 62/219 (28%), Gaps = 21/219 (9%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 AR + N Y ++L ++ + + A + +L+ P T Sbjct: 57 GSAARHLADMTDLLPAGDNTYELHLTLGKLYRQRGENDKAIRLHQALLEAPET--VGEKR 114 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDA------PWVTEAVVQQYVLAKEWSRAITFLNQ 213 D SA +A I + ++ Y ++W++AI Sbjct: 115 NQVLFELGQDYQSA-GLVDRAEQIFLGLQQGNMAAQARQVLLNIYQQDRDWAKAIDTAQL 173 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSL 270 + + + A + K D + A+++ + C A++ Sbjct: 174 LSHDEQTYRFEIAQFHCELAQAALFKSDFEQARTNIAKALDANRKCAR---ANMILGDLE 230 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 A I K N + Y ++ E Sbjct: 231 QKLGNYPAAVAAYTAIEKQN------HAYLSMVGEKLYD 263 >gi|307110542|gb|EFN58778.1| hypothetical protein CHLNCDRAFT_34097 [Chlorella variabilis] Length = 932 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 98/306 (32%), Gaps = 51/306 (16%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E + + E L+ +L+ P + + E GD+ A+ +A Sbjct: 568 RAAQLE-KAAGSRESLDALLRKAVQYCPQAEVLWLMA-AKEKWLSGDVAGARSVLEEAFV 625 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +PD+ + A + E RA L + +++ + + ++ + G Sbjct: 626 RNPDSEEIWLAAFKVEFENAELDRARLILAKAREHPPASTAR---VWMKSAMVEREAGAA 682 Query: 243 IASYHDAIESLKLCDNS----------------------------------IMASICAAK 268 A E ++ I + AA+ Sbjct: 683 GAERELLQEGIRRFPYFWKLHIMLGQLEERLGNADAARLAYAAGIKRCLDCIPLWVSAAR 742 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEIN-KESVE 326 KA +LE+ N P+ A ++ + +E K L ++ + Sbjct: 743 LEERAGNVAKARALLEQARLKN--PKNAQLWLAAVRTELRAQNQKAGEALMAKALQDCPD 800 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 S + ++ + M Q ++++ A+K + +A + + DK W A Sbjct: 801 SGPLWAET-INMAPRPQRKSRSVDALKKCNDDPHVVAAVAALFWLDRK-VDKARSWFNRA 858 Query: 386 LHAMPD 391 + PD Sbjct: 859 VTLNPD 864 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 9/131 (6%) Query: 163 ESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E R G + +A+ AL + P + W A +++ + L+ + A + Sbjct: 538 ECMRRGSVETARAIYAHALSVFPGKKSIWRRAAQLEKAA------GSRESLDALLRKAVQ 591 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +L + + E GD+ + E+ +S + A K + +A Sbjct: 592 YCPQAEVLWLMAAKEKWLSGDVAGARSVLEEAFVRNPDSEEIWLAAFKVEFENAELDRAR 651 Query: 281 VILEKIWKVNP 291 +IL K + +P Sbjct: 652 LILAKA-REHP 661 >gi|151554489|gb|AAI49783.1| OGT protein [Bos taurus] Length = 908 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P P + Sbjct: 104 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLAN 163 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + A L + ++G++ + ++L++ Sbjct: 164 ALKEKGSVAEAEDCYNTALRLCPT----HADSLNNLANIKREQGNIEEAVRLYRKALEVF 219 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K ++A + ++ +++P A+ Y+++ + ++ G L Sbjct: 220 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FADAYSNMGNTLKEMQDVQGAL 277 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A A+K+ P Sbjct: 278 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 323 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 75/197 (38%), Gaps = 11/197 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G++ A + KA+ + P+ + A+ + RA+ + + N Sbjct: 65 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NH 120 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A++ + ++G + + +++L + A A +L + +AE Sbjct: 121 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNT 180 Query: 286 IWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS 340 ++ P H + N ++ E G ++ A+RL E + ++ + + G Sbjct: 181 ALRLCPTHADSLNNLANIKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 238 Query: 341 IDQAHAKAMLAMKIAPR 357 + +A A++I+P Sbjct: 239 LQEALMHYKEAIRISPT 255 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 162 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 221 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 222 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 277 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 278 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 335 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 336 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 371 >gi|2266994|gb|AAB63466.1| O-linked GlcNAc transferase [Homo sapiens] gi|6911265|gb|AAF31458.1| HRNT1 [Homo sapiens] gi|18250916|emb|CAC86129.1| UDP-N-acetylglucosamine: polypeptide-N-acetylglucosaminyl transferase [Homo sapiens] gi|119625690|gb|EAX05285.1| O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N- acetylglucosaminyl transferase), isoform CRA_a [Homo sapiens] Length = 920 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+++ P P + Sbjct: 116 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLAN 175 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + A L + ++G++ + ++L++ Sbjct: 176 ALKEKGSVAEAEDCYNTALRLCPT----HADSLNNLANIKREQGNIEEAVRLYRKALEVF 231 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K ++A + ++ +++P A+ Y+++ + ++ G L Sbjct: 232 PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FADAYSNMGNTLKEMQDVQGAL 289 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A A+K+ P Sbjct: 290 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD 335 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 75/197 (38%), Gaps = 11/197 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G++ A + KA+ + P+ + A+ + RA+ + + N Sbjct: 77 AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSP----NH 132 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A++ + ++G + + +++L + A A +L + +AE Sbjct: 133 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNT 192 Query: 286 IWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS 340 ++ P H + N ++ E G ++ A+RL E + ++ + + G Sbjct: 193 ALRLCPTHADSLNNLANIKRE--QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK 250 Query: 341 IDQAHAKAMLAMKIAPR 357 + +A A++I+P Sbjct: 251 LQEALMHYKEAIRISPT 267 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + L++ T ++ +L G++ A R KAL++ P+ Sbjct: 174 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 233 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + D+ + Sbjct: 234 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDVQGAL 289 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 290 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 347 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 348 QIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHH 383 >gi|295692883|ref|YP_003601493.1| o-linked transferase [Lactobacillus crispatus ST1] gi|295030989|emb|CBL50468.1| O-linked transferase [Lactobacillus crispatus ST1] Length = 415 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 21/230 (9%) Query: 146 MLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + +P + + SL ++ G + +A+ +AL ++P+ + + + L+ Sbjct: 89 LYNVPESSSAYLDSLLVQADYYQTNGLIETAKDKLIRALQLAPEEDAIKFGLAEIEYLSG 148 Query: 203 EWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + +A+ L +++ E N + + L N ++ + A L + Sbjct: 149 NYEQALELYQDLIKRQSTFSEVNLYQRLFATFAKLGNYEEAAKVI-REHANSILDIDSK- 206 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314 A L+S ++A L+++ + +P +P +A Y H + L+ A Sbjct: 207 ----YEAGLVLLSVGDDKQAIKFLDEVIEQSPDYVNAYPLLAQAYDH--QHDNEQVLRTA 260 Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 N E E+L + ++ A + +D A +K+AP + Sbjct: 261 QAGLAYN-ELDETLYSMGARAAANLNELDTARDLLEKGLKVAPDNSDLRM 309 >gi|171915159|ref|ZP_02930629.1| putative outer membrane protein (ComQ) [Verrucomicrobium spinosum DSM 4136] Length = 809 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 65/189 (34%), Gaps = 17/189 (8%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A +Q+ + A L+ + + DKGD ++ ++ L ++ +++ Sbjct: 47 ARNLADQELVR-RNARVAEAQALLVEANSHNDKGDYESALRLYRQAWDLLPDAPLSAAVR 105 Query: 267 --AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL------- 317 A+ S+ +A + E+ ++++ + L RL Sbjct: 106 NQARDGYSRVAVAQAAKLAEQAKYAEARTLLSSVLADDFNPGYTDALTLQKRLDDPARYE 165 Query: 318 EEINKESV------ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQA 370 + E + E + + + + +G D A+ + +++ P + + EQ Sbjct: 166 PALTPEHIAKVTEVEEKLRLGQGLMSLGDFDAANERFRDVLRLDPYNGAARRGMERAEQH 225 Query: 371 NSHNTDKIL 379 + D Sbjct: 226 KAQYYDVAR 234 >gi|149923428|ref|ZP_01911833.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] gi|149815735|gb|EDM75261.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] Length = 3491 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 81/257 (31%), Gaps = 49/257 (19%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE------------------------ 203 GD + A+ +A+ I P +A+ Y L ++ Sbjct: 822 GDPDLARSAYERAVRIRPKHRGALDALADLYRLEEDSEPLAKVLGTLRLIADSDEEAFSF 881 Query: 204 -WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 W +A L +K + IL R + ++ +Y A + KL + Sbjct: 882 AWEQAQLLLLDVEKPGEAAEVLAWILEGPRRGDPEVNRSLLEAYRGASDREKLVAH---- 937 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + ++ + ++ W+V +N ++ R E Sbjct: 938 AELMLIGTADTAERAELFQLIVDAWQVL--------------DNKPAAMQAIRRRLEEFP 983 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---APRKEIFLL--LAQIEQANSHNTDK 377 E E + ++ E+G + A +++ P ++I L +A++ + + Sbjct: 984 EDPEGHAKLGELQAELGEFELALRSLARKLELVARDPDEQIDTLKRMAELADQGLGDARR 1043 Query: 378 ILYWTQSALHA-MPDPL 393 L + A DP Sbjct: 1044 ALELLRRASGIDPTDPA 1060 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 65/214 (30%), Gaps = 37/214 (17%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+++A+ AL PD + + V + ++ A L Q + ++ Sbjct: 2399 DVDAARSRFDAALAEDPDHAEARLGLGEVLVESGDFEGAEKQLEQAVEALGLVRAQEQLV 2458 Query: 229 --LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L+ + +Y +L+ + + + N+ R Sbjct: 2459 EGLVLLARVLEATDRAGEAYRRLTAALRHDPD-----NMGIRLAVVDNRVR--------- 2504 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 H ++ ++ L KR L E + ++ + AL A Sbjct: 2505 --ARRHRDVVSVVDQLE--------KRLTALRE-----ADGVLSKADAALVAQM-QAEAA 2548 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 A L ++ A++E A H+ + Sbjct: 2549 AAELELRRHEEAR-----ARLEAALGHDASNVRA 2577 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 10/127 (7%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------ 215 + R + A + +AL + P +EA++ ++ W RA + + Sbjct: 161 IQRRRFHAMGEAVAHYEQALRVDPGLTGASEALITLHLGGGAWERAFQLMETELGVLEGD 220 Query: 216 ----KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ R + L L D+ ++ ++K+ NS+ A + Sbjct: 221 PRFAQDPAVAARISELHLRLARLATEHYDDLASAARHLQAAIKMAPNSLAALRAFGNLYL 280 Query: 272 SQNKKRK 278 K + Sbjct: 281 GSGKASE 287 >gi|88603309|ref|YP_503487.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88188771|gb|ABD41768.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 984 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 65/211 (30%), Gaps = 18/211 (8%) Query: 84 GYKALYTGLMSIA---AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 G+ A L ++A + A ++ + V ++ LV ++ +A + A Sbjct: 154 GFMATIHALKALALIHTGEMSAAAEIMAAVGEE--GDKMPLVPYVKGILAWRSGDISAAE 211 Query: 141 EKLEMMLQIPATRE---FAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVT-EAVV 195 L + + L E R + A +P P Sbjct: 212 TFLRASCEDQPQDMQSKVDLAHLLTECGRE---DEALVIRRDISGFYAPPHPEAAPVFRA 268 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++ + + + A FL +K++ + L I G A K Sbjct: 269 EELLKSGRYEEAEVFLESAQKSSPD----DMDLFIPYLSSLYFTGRYDDLIRLAETGEKA 324 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++ A A +L S K R+A +L Sbjct: 325 S-DAWKAIYLKASALYSSGKIREAIRVLITA 354 >gi|58258167|ref|XP_566496.1| pre-mRNA splicing factor prp1 [Cryptococcus neoformans var. neoformans JEC21] gi|57222633|gb|AAW40677.1| pre-mRNA splicing factor prp1, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 946 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 32/268 (11%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E GD+ AQ +A + D+ + A + E AI L + K A Sbjct: 624 KEKWVGGDIPGAQAILAEAFKQNEDSESIFLAAAKLAAETGEMEAAIQILEKAKAQADTE 683 Query: 222 NRNRAILLIARSLENADKG-----------------------------DMIASYHDAIES 252 ++ R L D+ ++ + + + Sbjct: 684 RVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRGQIYESRNEVALARNAYAQG 743 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 + C SI I +A+ KA +LEK NP + + + E T + Sbjct: 744 CRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKNDELWAESIKIEERTGSPQQ 803 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 L +E S ++ S +A+ M + Q +++ A+K A +L + Sbjct: 804 AKSVLARAMQECPASPLLWS-MAIFMETPQQRKGRSVDAIKKAGEHPAVILAVARNFWSE 862 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGY 400 +K W +A+ A D W GY Sbjct: 863 RKIEKTRQWMANAITA--DEDWGDAWGY 888 >gi|224094184|ref|XP_002196319.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 3 [Taeniopygia guttata] Length = 914 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 5/149 (3%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195 A E L++ T Y+L + D A + +AL+++P A++ Sbjct: 581 KAKEAYLRALELDRTNADLWYNLAIVYIELKDPTEALKNFNRALELNPTHKLALFNSALL 640 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q + + +R Q+ + + + + D + + ++++L Sbjct: 641 MQ--ESGD-ARLRPEAKQRLLHYVKEEPQDSNGYFNLGMLAMDDKKDLEAEAWMKKAIRL 697 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILE 284 N A A K+ A +LE Sbjct: 698 QPNFRSALFNLALLYSQTGKELMALPVLE 726 >gi|108758609|ref|YP_629452.1| hypothetical protein MXAN_1193 [Myxococcus xanthus DK 1622] gi|108462489|gb|ABF87674.1| conserved domain protein [Myxococcus xanthus DK 1622] Length = 1219 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 72/203 (35%), Gaps = 9/203 (4%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ + + + FL R L + D+G Sbjct: 343 ARLQLLAAHAQRDDLNERRRFLEAAIAADPAMPEARVAL----ADHELDRGHPERVQPLV 398 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV 308 L+ + + A + A++ + ++ KA ++E+ +++ P P + + Sbjct: 399 APVLEKTPDDVNARLVLARAHEALGERPKAHALVEETFRLQPRVPRAVRAAAQVSRQLDR 458 Query: 309 GK--LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365 G+ + R + + + + +++ + E G ++ A + +K+ P + LA Sbjct: 459 GREAMDRMRVVLALRFDDTTTRHMLATMLAEAGQVESAQREYAQLVKLNPFDNGSRVRLA 518 Query: 366 QIEQANSH-NTDKILYWTQSALH 387 +++ +N L+ AL Sbjct: 519 ELKASNGAVEEAVALFAEARALS 541 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 86/265 (32%), Gaps = 33/265 (12%) Query: 119 EYLVYLLEVQI------ALAERQYNIAHEKLEMMLQIPAT-------------REFAVYS 159 L L + A Y + T ++ + Sbjct: 288 PTLTSALRAMVEKNPDDAALRGDYARVLGFFRAYDEREHTASAEAARAAEAAPKDARLQL 347 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + R DLN +R+ A+ P P A+ + R + + Sbjct: 348 LAAHAQR-DDLNERRRFLEAAIAADPAMPEARVALADHELDRGHPERVQPLVAPVLEKTP 406 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRK 278 + R +L + + G+ ++ E+ +L + ++ AA + Q ++ R+ Sbjct: 407 DDVNARLVL----ARAHEALGERPKAHALVEETFRLQPR-VPRAVRAAAQVSRQLDRGRE 461 Query: 279 AEV----ILEKIWKVNPHPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A +L + +A + + + +L ++N S V +++ Sbjct: 462 AMDRMRVVLALRFDDTTTRHMLATMLAEAGQVESAQR--EYAQLVKLNPFDNGSRVRLAE 519 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358 + G++++A A A ++P + Sbjct: 520 LKASNGAVEEAVALFAEARALSPDE 544 Score = 36.8 bits (84), Expect = 9.2, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 19/164 (11%) Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNY-DKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112 A L+ R P + D+G +A+ + +A Sbjct: 428 AHALVEETFRLQPRVPRAVRAAAQVSRQLDRGREAMDRMRVVLA---------------- 471 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 F + ++L +A Q A + ++++ + L G + Sbjct: 472 -LRFDDTTTRHMLATMLAE-AGQVESAQREYAQLVKLNPFDNGSRVRLAELKASNGAVEE 529 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 A +A +SPD P V E + + A A+ + Sbjct: 530 AVALFAEARALSPDEPEVYEREGRALLAAGRREPALASFERSLA 573 >gi|154248048|ref|YP_001419006.1| TPR repeat-containing protein [Xanthobacter autotrophicus Py2] gi|154162133|gb|ABS69349.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus Py2] Length = 655 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 13/242 (5%) Query: 127 VQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + A + A + + + L FE ++G A A + D Sbjct: 10 ARAADLHRMGHFEQALAIYRRLAKAHSASFDIQRLLIFELLQVGRPKEAVIAARRLGDAH 69 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P P + + W +A+ + E A L + + Sbjct: 70 PRNPHAAILLGASHQGLGNWEKALAAFQVAL--SLEGAPLEARFLAGNAFCALGRYAEGV 127 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIY 299 + +DA+ + SI A A +L + +A E + + P P +A Sbjct: 128 ACYDAVLAA--DARSIEALSNRAGALARLGRLEEALRDSEALVALQPWQPLHLVNLAGTL 185 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + A + ++ + + L +G +A A+ +AP+ Sbjct: 186 LELQR--SRDVIAAADAALRLAPGLADAEYLRGQALLGLGKWAEARVSLEKAVDLAPQNT 243 Query: 360 IF 361 F Sbjct: 244 AF 245 >gi|332532510|ref|ZP_08408388.1| hypothetical protein PH505_af01250 [Pseudoalteromonas haloplanktis ANT/505] gi|332038153|gb|EGI74600.1| hypothetical protein PH505_af01250 [Pseudoalteromonas haloplanktis ANT/505] Length = 557 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 91/262 (34%), Gaps = 56/262 (21%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ------------------------IALAER 134 + L +K ++Y + L+ L Q +A Sbjct: 164 DTALDKKNNNYSPILLRLKGDALLRLKRAQDAKDFFKSVLDIQKFAWAKVGLVEALIANN 223 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ +A L+ ML+ TR A+ L ++ AQ + ++A DI+P +++ Sbjct: 224 EHILAQRMLKTMLERQETRLVALDLLGRLEIKLNQFELAQSFLSQAADIAPRNITRQKSL 283 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRN------RAILLIARS----LENADKGDMIA 244 ++ ++ ++ +K+ + ++ L AR+ D+ D I Sbjct: 284 SNVSLINHDYEKSYLT----QKDIATFAKHSIHDHPDVYLNAARAGIDFALTTDQTDQIQ 339 Query: 245 --SYHDAIESLKLCDNSIMAS------ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 S L + + A+ +++ +KA+ ++E ++ Sbjct: 340 RISRQTNQYINDLKKQFPNNANQAQIDVLNARLHYLKDEHQKAKKLIE---------QLD 390 Query: 297 NIYTHLLS-ENTVGKLKRALRL 317 + TH+ S + + K K L Sbjct: 391 DDDTHIRSVDGALDKAKAFHEL 412 >gi|322419109|ref|YP_004198332.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320125496|gb|ADW13056.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 660 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 67/232 (28%), Gaps = 11/232 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + + L + + A AL + P A V A Sbjct: 386 GDAAGAVNEFRTVATERPQFMEGHIRLAEAYLQKKEPALALDALMTALKLDPSAREVQFA 445 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + E +A L + + + + L + A GD + E Sbjct: 446 LSRYHEAQGEAKQARALLVR-MVAKEPGDLEARVELGDFA---ARSGDARGAEAQYAEVK 501 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGK 310 K + + Q K ++A EK ++ N + + S ++ + Sbjct: 502 KRAPGLPIGYARTGALYVRQGKLQRALAEYEKAYRQNEDSWLLANDLAFLLAQSASSPRE 561 Query: 311 LKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L RAL L +N + L + + G +A A P Sbjct: 562 LDRALALAEKARALNPQGANVLDTMGWLHYRRGDAVKATELLRQAHARNPDA 613 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 98/341 (28%), Gaps = 40/341 (11%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146 L G + +A AR+ V + +LL L E L + Sbjct: 135 LLKGAVLVAGQEHGQARQFLEGVIARGVAK--PDAFLLLANACLQAGDRKAGEEMLRRGL 192 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 P + E + SL + G + +A + PD P + Y A + R Sbjct: 193 KANPRSVELVL-SLAGITANSGRGDETATLLEQAAVLEPDNPGHRINLAALYWAAGKEPR 251 Query: 207 AITFL-----------NQKKKNAKEWNRNRAILLIARSLENADKGDMI------------ 243 A L ++ + A ++ R R L+ + Sbjct: 252 AAEILHKLVQAQPADQERRLRVASFYSERRRFADFERELKEGLAANPKSTELRFALADLY 311 Query: 244 ---ASYHDAIESLKLC-------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 A+E+LK C I A AK + + + +A +E++ K +P Sbjct: 312 LGREQADRAVETLKGCLSGKAGDPEVIRAKTALAKVCLQRAELDRASAYIEEVLKESPKN 371 Query: 294 EIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 A L + G + + + +E + +++ L+ A M Sbjct: 372 VDARYLKGGVQLKKGDAAGAVNEFRTVATERPQFMEGHIRLAEAYLQKKEPALALDALMT 431 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A+K+ P + + P Sbjct: 432 ALKLDPSAREVQFALSRYHEAQGEAKQARALLVRMVAKEPG 472 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 55/189 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + ++ + V + A+ + A L M+ A L Sbjct: 423 ALALDALMTALKLDPSAREVQFALSRYHEAQGEAKQARALLVRMVAKEPGDLEARVELGD 482 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + R GD A+ + +P P YV + RA+ + + ++ Sbjct: 483 FAARSGDARGAEAQYAEVKKRAPGLPIGYARTGALYVRQGKLQRALAEYEKAYRQNEDSW 542 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + ++ + A ++ L + KA + Sbjct: 543 LLANDLAFLLAQSASSPRELDRALALAEKARALNPQGANVLDTMGWLHYRRGDAVKATEL 602 Query: 283 LEKIWKVNP 291 L + NP Sbjct: 603 LRQAHARNP 611 >gi|282164262|ref|YP_003356647.1| hypothetical protein MCP_1592 [Methanocella paludicola SANAE] gi|282156576|dbj|BAI61664.1| hypothetical protein [Methanocella paludicola SANAE] Length = 383 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 12/133 (9%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK- 288 +A L+ D D I E+L++ + A + + A + +K K Sbjct: 235 LAYILDLNDDPDTIEELR---EALRIRPKYLDAMFLLGEHYGNHGMIDDAVRMFKKAMKT 291 Query: 289 ----VNPHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 PH I Y + + +LKRAL+L + + E+ ++++ E D+ Sbjct: 292 YPDNALPHYYIGATYADEGMFKEARKELKRALKL---DPGNFEARRRLAQLYAEDELYDE 348 Query: 344 AHAKAMLAMKIAP 356 A + + P Sbjct: 349 AIEEYEKLIATEP 361 >gi|91088509|ref|XP_971592.1| PREDICTED: similar to pre-mRNA-splicing factor prp1 [Tribolium castaneum] gi|270011722|gb|EFA08170.1| hypothetical protein TcasGA2_TC005794 [Tribolium castaneum] Length = 933 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 36/198 (18%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ A Sbjct: 571 RAAHLEKNH-GTRESLEGLLQRAVAHCPKSEILWLMG-AKSKWLAGDVPAARGILALAFQ 628 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ +E+ RA L + + +A A Sbjct: 629 ANPNSEEIWLAAVKLESENREYERARRLLAKARGSAPTPRVMMKSAKLEWSLNDLKAAQN 688 Query: 229 LIARSLE---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L+ +L+ + +G++ ++ ++K C NSI I ++ + Sbjct: 689 LLDEALKVFPDFAKLWMMMGQIHEQEGELSKAFDVYYGAIKKCPNSIPLWILLSRLEEKR 748 Query: 274 NKKRKAEVILEKIWKVNP 291 KA +LEK NP Sbjct: 749 GLLIKARSMLEKARLKNP 766 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 77/225 (34%), Gaps = 22/225 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 280 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPQSEDLW- 338 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 339 -------LEAARINPQDTAKAVIAQAARHIPTSVRIWIKAADVETETKAKR---RVYRKA 388 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E +VE + ++++ + + A Sbjct: 389 LEHIPNSVRLWKAAVELENPEDARILLSRA---VECCPTAVELWLALARL----ETYENA 441 Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 A + P K+I+ A++E+A + N + + A+ + Sbjct: 442 RKVLNKARENIPTDKQIWTTAAKLEEA-NGNHAMVEKIIERAITS 485 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 76/214 (35%), Gaps = 15/214 (7%) Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G A+ AL P + W+ A +++ L + A Sbjct: 544 SQGAYECARTVYNHALATFPGKKSIWLRAAHLEKN------HGTRESLEGLLQRAVAHCP 597 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 IL + + GD+ A+ + + NS + A K + +A +L Sbjct: 598 KSEILWLMGAKSKWLAGDVPAARGILALAFQANPNSEEIWLAAVKLESENREYERARRLL 657 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMG 339 K P P + L E ++ LK A L + + + +++ +I + G Sbjct: 658 AKARGSAPTPRVMMKSAKL--EWSLNDLKAAQNLLDEALKVFPDFAKLWMMMGQIHEQEG 715 Query: 340 SIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372 + +A A+K P +++LL+++E+ Sbjct: 716 ELSKAFDVYYGAIKKCPNSIPLWILLSRLEEKRG 749 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 27/163 (16%) Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIA 296 D D+ + + N A I +A+ K + A ++ K +VNP ++ Sbjct: 279 DINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPQSEDLW 338 Query: 297 NIYTHLLSENTVGKL-------------------------KRALRLEEINKESVESLVIV 331 + ++T + K R+ E + + V + Sbjct: 339 LEAARINPQDTAKAVIAQAARHIPTSVRIWIKAADVETETKAKRRVYRKALEHIPNSVRL 398 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSH 373 K A+E+ + + A A++ P E++L LA++E + Sbjct: 399 WKAAVELENPEDARILLSRAVECCPTAVELWLALARLETYENA 441 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 8/164 (4%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + +G + +L + AA + + E +L++ P Sbjct: 539 AENCVSQGAYECARTVYNHALATFPGKKSIWLRAAHLEKNHGTRESLEGLLQRAVAHCPK 598 Query: 293 PEIANIYTH----LLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAK 347 EI + L + + L L + N S E + K+ E ++A Sbjct: 599 SEILWLMGAKSKWLAGDVPAAR--GILALAFQANPNSEEIWLAAVKLESENREYERARRL 656 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A AP + + A++E + ++ AL PD Sbjct: 657 LAKARGSAPTPRVMMKSAKLEWS-LNDLKAAQNLLDEALKVFPD 699 >gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii] gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii] Length = 973 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 5/126 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + ++ Y+ A +Q P Y L ++ DL SA K LD+ Sbjct: 283 ARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDV 342 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ + V ++ +A+ + K + A + I L + D + Sbjct: 343 HPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSP--RDVDAWIEIGELLVSTDFSAAL 400 Query: 244 ASYHDA 249 ++ A Sbjct: 401 DAFKTA 406 >gi|302913221|ref|XP_003050871.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731809|gb|EEU45158.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 927 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 78/209 (37%), Gaps = 16/209 (7%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+ +A + +P+ + A V+ +A L ++ A Sbjct: 602 LAKEKWQAGEVDNARLVLKRAFNQNPNNEDIWLAAVKLESENGNAEQARKLLEIAREQAP 661 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ R L G++ A+ +++L+L + + + K +A Sbjct: 662 TDRVWMKSVVFERVL-----GNVEAALDLVLQALQLFPAAAKLWMLKGQIYGDLGKLGQA 716 Query: 280 ----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN---KESVESLVIVS 332 ++ + K P + +Y L EN +K L+ ++ + Sbjct: 717 REAYATGVKAVPKSVP---LWLLYARLE-ENAGLTVKARSVLDRARLAVPKNAQLWCESV 772 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 ++ G++ QA + A + P+ + Sbjct: 773 RLERRAGNLAQAKSMMAKAQQEVPKSGLL 801 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 20/238 (8%) Query: 162 FESCRIGDLNSAQRYATKALDIS--PDAPWVTEAVVQQY--VLAKEWSRAITFLNQKKKN 217 S G +A+ AL + W+ A +++ W L + + Sbjct: 536 RASINRGKYETARAIYAYALRVFVNSKTMWMAAADLERNHGSRESLW----QVLEKAVEA 591 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + +L + E G++ + + N+ + A K Sbjct: 592 CPKSEDLWMML----AKEKWQAGEVDNARLVLKRAFNQNPNNEDIWLAAVKLESENGNAE 647 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSK 333 +A +LE + P + ++ E +G ++ AL L ++ + + ++ + Sbjct: 648 QARKLLEIAREQAPTDRVW--MKSVVFERVLGNVEAALDLVLQALQLFPAAAKLWMLKGQ 705 Query: 334 IALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 I ++G + QA +K P ++LL A++E+ N+ T K A A+P Sbjct: 706 IYGDLGKLGQAREAYATGVKAVPKSVPLWLLYARLEE-NAGLTVKARSVLDRARLAVP 762 >gi|322421485|ref|YP_004200708.1| CheR-type MCP methyltransferase [Geobacter sp. M18] gi|320127872|gb|ADW15432.1| MCP methyltransferase, CheR-type [Geobacter sp. M18] Length = 497 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 59/164 (35%), Gaps = 19/164 (11%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G A T+ L + + + + + + + A+ ++ +R Sbjct: 346 ERGAYGEAVEMVTEQLALDQNDTDALALLCRIHANEGKLAAALDASDRALA----ADRLS 401 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A L R++ ++G + ++L L + ++A A Q K R+++ Sbjct: 402 AGLHYLRAVILQEQGVDDEAAASLKKALYLDQDLVLAHFTLANLEKRQGKVRESQR---- 457 Query: 286 IWKVNPHPEIANI--YT--HLLSEN---TVGKLKRALRLEEINK 322 + H +A + Y+ ++ + + G+LK +R Sbjct: 458 ----HFHNALALLDKYSPDEVIPGSDGMSAGRLKEIIRAANARP 497 >gi|212635296|ref|YP_002311821.1| tetratricopeptide repeat-containing protein [Shewanella piezotolerans WP3] gi|212556780|gb|ACJ29234.1| N-acetylglucosaminyl transferase, putative [Shewanella piezotolerans WP3] Length = 386 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 85/250 (34%), Gaps = 32/250 (12%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + + ++ P R+ A+ L + G + A+ ++ + Sbjct: 83 GEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVNQEDHSEE 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y + K+W +AI + + K+K + + A + E+AD Sbjct: 143 AETQLIAIYQVTKDWQKAIDIIKKLKRKRQQVLKHDSAHFYCELAAESADDA---IKLKR 199 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + + K+ + A + A+ + + + +EK + N L ++ + Sbjct: 200 LLSANKIDPSCGRALLTLAELYLKLEDFKSCKQYIEK---------LLNTDIDLFPDS-L 249 Query: 309 GKLKRALRLEEINKESVE-------------SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 K+ L + N E V +++ + G+ A + + Sbjct: 250 PIAKQVYLLTDDNFGYQELLREAIEKGAGASIAVTLAQHMISQGNEKDAEKLILEGLIRH 309 Query: 356 PRKEIFL-LL 364 P + F L+ Sbjct: 310 PTMKSFQHLM 319 >gi|170730497|ref|YP_001775930.1| hypothetical protein Xfasm12_1370 [Xylella fastidiosa M12] gi|167965290|gb|ACA12300.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 690 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 12/227 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G L+ A++ + A I D P + + + +A+ L+Q + E Sbjct: 110 AIARGALDEAEQLSRTAARIISDHPQLLAVNATIALRRGQVDQALAMLSQAVELLPE--- 166 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L + KG + + ++L + I A+ Q + A IL Sbjct: 167 -EPAVLFSLGFAYLQKGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRIL 225 Query: 284 EKIWKVNP--HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 E+ + P + + LL+ N L ++ E +L + ++ Sbjct: 226 EEALSLTEGDTPALHRLTGEFELLAGNPDRALPHLRQVLATWPEDPRTLEALLTAWKQLD 285 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD---KILYWTQ 383 D A A+ I PR L A++ A + + I W Sbjct: 286 MDDDARVTLDAALDIKPRNHDLWL-ARLAVAPVGSDEARIVIERWLS 331 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 32/296 (10%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ + A M S E V L + A + ++++ Sbjct: 143 IALRRGQVDQALAMLSQAV--ELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVIELNP- 199 Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITF 210 V +L + + R G L+ A R +AL + D P + + +LA RA+ Sbjct: 200 HVIPVRALIAQLAQRQGRLDDALRILEEALSLTEGDTPALHRLTGEFELLAGNPDRALPH 259 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L Q E R LL A + D D + A++ + A+ Sbjct: 260 LRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKPRNHDL-----WLARLA 313 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESL 328 ++ +A +++E+ + + E+ L ++ + + E+ Sbjct: 314 VAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQNNPEAA 356 Query: 329 VIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++ +A+E G + ++ P + L IE H + W Sbjct: 357 ETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVTCLQQLIESVPEHERTILRPWL 412 >gi|220904712|ref|YP_002480024.1| hypothetical protein Ddes_1444 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869011|gb|ACL49346.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 581 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 78/241 (32%), Gaps = 18/241 (7%) Query: 160 LYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 LY E+ G L PD+ + V +KE++ A + LN Sbjct: 136 LYAEALMEQGTPERGVELMRTYLAKHPDSLDARLELALLLVKSKEYTEAESLLNS----- 190 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ + + +++K + + A A + + + Sbjct: 191 VTAKERTPLVDYYHARALIGMDKQAEAIPYLQKAIKEMPDFVEAMAELAFIHEQRAELKS 250 Query: 279 AEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A + EK+ K N P+ + I L LK + +++ + V+ + Sbjct: 251 ARNLYEKLLKFNFSPQDVLLRLINLSLRMNQPEKALKYMRQ----GPDTIPFKLTVAGLF 306 Query: 336 LEMGSIDQAHAKAML-AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS----ALHAMP 390 ++ QA + A K +++LLLA + H+ L W + A Sbjct: 307 IDSRHYLQAESLLKQIAAKDDAPVDVYLLLADLTYEQRHDLPLALSWLDRIPPQSKAAPR 366 Query: 391 D 391 Sbjct: 367 G 367 >gi|149173184|ref|ZP_01851815.1| hypothetical protein PM8797T_28379 [Planctomyces maris DSM 8797] gi|148847990|gb|EDL62322.1| hypothetical protein PM8797T_28379 [Planctomyces maris DSM 8797] Length = 339 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 49/134 (36%), Gaps = 17/134 (12%) Query: 200 LAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 E+++A + + ++ N A+++ +G++ + +L+L Sbjct: 45 QRGEYAKARESFTRAIADNPGNPDYVHNLAVVM-------EKEGNLAGAEQTYQNALRLD 97 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTHLLSENTVGKL 311 + + A+ +ISQ ++++A + W+ P IA + S + G Sbjct: 98 PSHQPSHHGLAELMISQGRQQEAVQHI-TAWRDT-QPYIAESHLEMAWLLEQSGDINGAE 155 Query: 312 KRALRLEEINKESV 325 + ++ Sbjct: 156 QSLKAAANVDPNHP 169 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 47/148 (31%), Gaps = 4/148 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 AR+ + + + +Y+ L + E A + + L++ + + + Sbjct: 47 GEYAKARESFTRAIADNPGNPDYVHNL--AVVMEKEGNLAGAEQTYQNALRLDPSHQPSH 104 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + L G A ++ T D P + + + + A L K Sbjct: 105 HGLAELMISQGRQQEAVQHITAWRDTQPYIAESHLEMAWLLEQSGDINGAEQSL--KAAA 162 Query: 218 AKEWNRNRAILLIARSLENADKGDMIAS 245 + N + + + + + + + + Sbjct: 163 NVDPNHPKVLAHLGQVYQQTGRSEEAIA 190 >gi|307329776|ref|ZP_07608932.1| Tetratricopeptide TPR_2 repeat protein [Streptomyces violaceusniger Tu 4113] gi|306884616|gb|EFN15646.1| Tetratricopeptide TPR_2 repeat protein [Streptomyces violaceusniger Tu 4113] Length = 441 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 79/227 (34%), Gaps = 13/227 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G A + A KA + P P V + L + + A L + + ++ + A Sbjct: 161 GRYQDAYKAAKKADSLRPGIP-VFTRLGYVLELRGDPAGARRVLLRAQ-DSATSPSDIAY 218 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + A ++G+ + +L+ + A ++ ++ +++ LE + Sbjct: 219 VSAALGQLAWNQGEYDTARRAYSTALRAVPGYLPALEGRGRTSVADGRQKAGIRDLEAVV 278 Query: 288 KVNPHP----EIANIYTHLLSENTVGKLKRALR---LEEINKESVESLVIVSKIALEMGS 340 + P P + Y + ++ + + ++ + V + + + +A + G Sbjct: 279 RRYPLPAELAALGEAY-EARGDRSLARRQYSVVGTWITLARANGVATDLDSALVAADHGE 337 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKILYWTQSAL 386 + +A A LA + + + +K + + A Sbjct: 338 VKEALEAARAEWDRRRTVHTADALAWALHR--NGEDEKAREYAERAA 382 >gi|297823015|ref|XP_002879390.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gi|297325229|gb|EFH55649.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] Length = 800 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + L + +W + + + +G ++++ E+ LC A Sbjct: 289 LLALEAAESGGNQWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLG 348 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322 +L + R A LE+ + P H ++A+ H + E+ ++ R ++ Sbjct: 349 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHAMGEDERA-IEVFQRAIDLKP 406 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++L + + +++G +A + + P L + + T++ Sbjct: 407 GHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRAL 466 Query: 383 QSALH 387 + AL Sbjct: 467 KEALK 471 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 19/146 (13%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 RA+ L+ +L G+ A+ E++ L + A A SL + + +A Sbjct: 339 THYRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIE 396 Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331 + ++ + P H + + +Y L G+ +RA L + + Sbjct: 397 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNK 449 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + L G ++A A+K+ R Sbjct: 450 AVSLLGAGETEEAKRALKEALKMTNR 475 >gi|912469|gb|AAB18507.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655] Length = 1165 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 40/352 (11%), Positives = 99/352 (28%), Gaps = 68/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 361 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 418 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 419 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 478 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 479 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 538 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + L + Sbjct: 539 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---------LETA 589 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 N+ R++ E P ++ + + T + L + +++ Sbjct: 590 NRLRESGKEAEAEVLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 648 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 649 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 700 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 4/154 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 R+ + L A R Y A + +L A+ L Sbjct: 593 RESGKEAEAEVLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGLT 652 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAK 219 GD +A+ K + V + + A N+ + ++ Sbjct: 653 EVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKSQ 712 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A++L + A GD + +++ Sbjct: 713 PPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 746 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 Q+K+ A R RA + L D G + + ++++ A + Sbjct: 266 QLAEQQKQLADPAFRARA-----QGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQ 320 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-------EIANI---YTHLLSENTVGKLK---RAL 315 + + + A LEK ++PH + + + + + K RA Sbjct: 321 AYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAE 380 Query: 316 RL--EEINKESVESL--VIVSKIALEMGSIDQAHAKAMLAMKIA 355 RL + N ++ +S + + +A+ A +++ Sbjct: 381 RLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMD 424 >gi|134106111|ref|XP_778066.1| hypothetical protein CNBA0690 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260769|gb|EAL23419.1| hypothetical protein CNBA0690 [Cryptococcus neoformans var. neoformans B-3501A] Length = 942 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 32/268 (11%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E GD+ AQ +A + D+ + A + E AI L + K A Sbjct: 620 KEKWVGGDIPGAQAILAEAFKQNEDSESIFLAAAKLAAETGEMEAAIQILEKAKAQADTE 679 Query: 222 NRNRAILLIARSLENADKG-----------------------------DMIASYHDAIES 252 ++ R L D+ ++ + + + Sbjct: 680 RVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRGQIYESRNEVALARNAYAQG 739 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 + C SI I +A+ KA +LEK NP + + + E T + Sbjct: 740 CRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKNDELWAESIKIEERTGSPQQ 799 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 L +E S ++ S +A+ M + Q +++ A+K A +L + Sbjct: 800 AKSVLARAMQECPASPLLWS-MAIFMETPQQRKGRSVDAIKKAGEHPAVILAVARNFWSE 858 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGY 400 +K W +A+ A D W GY Sbjct: 859 RKIEKTRQWMANAITA--DEDWGDAWGY 884 >gi|168022875|ref|XP_001763964.1| predicted protein [Physcomitrella patens subsp. patens] gi|162684703|gb|EDQ71103.1| predicted protein [Physcomitrella patens subsp. patens] Length = 684 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 102/340 (30%), Gaps = 48/340 (14%) Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115 ++ RF L +L + + G++ + P A + Sbjct: 129 VVSLYCWRFKLKAKKLL-RAPAGCKNIRAFSLRSRGVIKFMMKDYPGA--LADLNKADSL 185 Query: 116 FHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 N + L + Y A ++ P + +L +GD A Sbjct: 186 DPNNSFILQLRGDVKCWMNDYEGALNDLSRANRLRPDDTFT-LRALGAAKSALGDRRGAL 244 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIA 231 + A + P+ W + +++ A+ L+ + + R R ++ Sbjct: 245 QVLNAANRLQPNDMWTLRLRGRVKRYLHDYAGALVDLDAADRIEPNDLDVLRVRGVV--- 301 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + D + D ++ ++ S A + K +A + ++K Sbjct: 302 ----KFNLCDFEGALIDLNKAHRMEPKSSSILRYRADVQLRAGKLDQALIDVKKA----- 352 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + ++T G L R ++ +M A A A Sbjct: 353 ----------MELDSTSGSLYRIR----------------GEVKFQMKEFPAALADLNKA 386 Query: 352 MKIAPRKEIFLLLAQIEQA-NSHNTDKILYWTQSALHAMP 390 +++ P + L A+ E + ++ L Q+A AM Sbjct: 387 LEMQPDD-VCGLRARGELLYEMGDYEEALTDLQAADRAMR 425 >gi|217969861|ref|YP_002355095.1| HemY domain protein [Thauera sp. MZ1T] gi|217507188|gb|ACK54199.1| HemY domain protein [Thauera sp. MZ1T] Length = 397 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 52/412 (12%), Positives = 122/412 (29%), Gaps = 52/412 (12%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 +R + + I + +++ V + + S + + +L + LL Sbjct: 1 MRALIWLIGIFALAVGVTMLAGVNDGYVLVVLSPWRAQVSLNLFIVVLVVGVALIHLLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + +R DK +AL+ + ++ A K S + Sbjct: 61 MVTRTVQLPGRVARWRERRRRDKADRALHGSVTALFEGRYSEALK--SASTAYSASDGSP 118 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATK 179 + A + TR + G + A+ Sbjct: 119 MAA------------LVAARAAYGL---QDDTR---YREWLDHAAEQGKESEVARLMTEA 160 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----------KKNAKEWNRNRAILL 229 L I + A + Q + A+ L K N R L Sbjct: 161 ELAIDARQFELAAARLAQLRETGQKHIAMLRLESKVAYELGRWEELVNNVRQLRKHKALT 220 Query: 230 IARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQ------------NK 275 ++ + + ++ L I + A + LI + + Sbjct: 221 AEQAAPALRRAHVERMRQLVGDASALLGYWQEIPSEELADRGLIKEVLPLMARAGQAMHM 280 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSK 333 + + E +L++ W ++A +Y + ++T L +A E L + + Sbjct: 281 RAQTETLLDEQWDS----DLARLYASCANTMDDTNACLHKAEAWLEKQPRDAGLLFALGQ 336 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + + +A + ++ + P+ L LA + + + ++ +A Sbjct: 337 LCRRVELWGKAQSYLEASLSVDPQVGTHLALAHLFETLERRDESQRHYRAAA 388 >gi|209529687|ref|NP_001129330.1| transmembrane and TPR repeat-containing protein 3 [Rattus norvegicus] gi|149067073|gb|EDM16806.1| transmembrane and tetratricopeptide repeat containing 3 (predicted), isoform CRA_a [Rattus norvegicus] gi|149067074|gb|EDM16807.1| transmembrane and tetratricopeptide repeat containing 3 (predicted), isoform CRA_a [Rattus norvegicus] Length = 920 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 18/195 (9%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 517 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 576 Query: 269 SLISQNKKRKAEVILEKI----------WKVNPHPEIANIYTHL-LSENTVGKLKRALRL 317 L+ NK KA+ K W +A +Y L + + RAL L Sbjct: 577 LLLKMNKPLKAKEAYLKALELDRNNADLWYN-----LAIVYIELKEPDEALKNFNRALEL 631 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376 +K ++ + I+ + + E+ +A + + + P + L + + +++ Sbjct: 632 NSRHKLALFNSAILMQESGEVKLRPEARKRLLNYINEEPQDANGYFNLGMLAMDDKKDSE 691 Query: 377 KILYWTQSALHAMPD 391 W + A+ PD Sbjct: 692 -AETWMKRAIKLQPD 705 >gi|302142595|emb|CBI19798.3| unnamed protein product [Vitis vinifera] Length = 778 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 11/191 (5%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCDNSIM 261 A + A+ A LL + +G ++++ E+ LC Sbjct: 227 EAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGMVMSACEHYREAAILCPTHFR 286 Query: 262 ASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 A +L + R A LE K + H ++A+ H + E + + Sbjct: 287 ALKLLGSALFGVGEYRAAVKALEEAIFMKADYADAHCDLASA-LHAMGEGEKA-IPVFQK 344 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 ++ V++L + + ++MG +A + + P L + + + Sbjct: 345 AIDLKPGHVDALYNLGGLYMDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAE 404 Query: 377 KILYWTQSALH 387 + + AL Sbjct: 405 EAKKALKEALK 415 >gi|255075899|ref|XP_002501624.1| predicted protein [Micromonas sp. RCC299] gi|226516888|gb|ACO62882.1| predicted protein [Micromonas sp. RCC299] Length = 329 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 15/224 (6%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 H+R +G + L G + +A A + + E A + + Sbjct: 55 HRRATQRGDQMLKLGRLEVAEACYLGALRQKNDFPMALYGLGEVHTR------AEDDDRV 108 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 ++A ++ L+ A +L R + A TKAL+++P EA+ + Sbjct: 109 DLAESAYKLALENWPQYVDAYIALGDLHERRERNDDAVAAYTKALEVAPGDVMAWEALGR 168 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL--------IARSLENADKGDM-IASYH 247 ++ ++ +A + A + ++L LE A+ + Sbjct: 169 HHLATSDFDKAKESYEKALTTATNGESSPGLILGLAKAAWGAGSKLEGAEATKKFVECVS 228 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A ++ L + A+ K + +KA +L + +++P Sbjct: 229 HAEKATNLAPDFGQAAHWNGKCRTHLKQTKKATELLFRAVELDP 272 >gi|242784767|ref|XP_002480459.1| DnaJ and TPR domain protein [Talaromyces stipitatus ATCC 10500] gi|218720606|gb|EED20025.1| DnaJ and TPR domain protein [Talaromyces stipitatus ATCC 10500] Length = 691 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 28/182 (15%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATR--EFAVYSLYFESCRIGD 169 + + LL + + + A + M LQ P + + + + Sbjct: 377 LRENNQDPDALLLRAKAYYGQGDNDQAVKYTRMSLQLDPDNKKAFTLLRLVQRLVRTKEE 436 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 N+A + AK++ RA+ Q + + LL Sbjct: 437 GNAAFK-------------------------AKDYKRAVELYTQGLEIDPTNKDTNSKLL 471 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R+ + D + D E+L+L I A AK+ + +A + + + Sbjct: 472 QNRAQAHIALKDYEKAIEDCTEALRLDPGYIKAQKIRAKAHGAAGNWEEAIKDYKNVAET 531 Query: 290 NP 291 NP Sbjct: 532 NP 533 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 29/237 (12%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + Y A ++ L++ + + A A +AL++ P+ + Sbjct: 212 QGDYQRAIQEYNKALEVNPNSSIFLSNRAAAFLSANRFIEALDDAQRALELDPENSKIMH 271 Query: 193 AVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + A+ L++ + N + I ++ ++ + G + A Sbjct: 272 RLARILTSLGRPADALDVLSKVQPPASAKDRANAEAMLRHITQAEDSLNNGKGGSLVVFA 331 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 IE K RK W++ + + +EN G Sbjct: 332 IEQAKQM--LGPGV----------KTPRK--------WQLM----LGEAQLKIGNENGFG 367 Query: 310 KLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL 364 K A+ L N + ++L++ +K G DQA +++++ P K+ F LL Sbjct: 368 KAHDVAISLLRENNQDPDALLLRAKAYYGQGDNDQAVKYTRMSLQLDPDNKKAFTLL 424 >gi|119493196|ref|ZP_01624071.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119452761|gb|EAW33938.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 867 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 92/266 (34%), Gaps = 19/266 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA 156 + A + +L L + Q A + P + Sbjct: 398 GDHQKASHCLEKAYELEPEKATPEDHLKLGNTRLQQGQLQAAMSCYRHALRLNP--QLAG 455 Query: 157 VYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y E R GD +A + KA ++ P P +++ Q +E A+ Sbjct: 456 AYHGIGEIQRLQGDAVNALQSYRKATELEPKQPHFYQSLAQLLAQQEETQEALEI----Y 511 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQ 273 K E N N A+ + + + ++++L N A+ K L Q Sbjct: 512 KKLLELNPNNALAYHQVGEIFKQQWQLKEAVVAYQKAIQLNPN---AASYYSLGKVLAKQ 568 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESL 328 + ++A IL + +++ + + A Y L + +T ++ + E++ S E+ Sbjct: 569 EQWQEAGSILRQAMQLDGNAD-AEAYKCLADALLQTGDTEAAIQAYQKATELDSNSEEAY 627 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ + + + A + A+++ Sbjct: 628 QKLADLLRDKEQFEDAISAYHRAVEL 653 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 70/199 (35%), Gaps = 19/199 (9%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G++++A R KAL I P+ P V + Y + +AI++ Q ++ A Sbjct: 330 GEISAAIRSYEKALAIQPNYPEVHANLGSLYAQQERLEKAISYYQQAITQKPDF----AG 385 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + D GD + H ++ +L + + R + L+ Sbjct: 386 AYRNVAKIFTDMGDHQKASHCLEKAYELEPEKATP-----EDHLKLGNTRLQQGQLQAAM 440 Query: 288 KVNPH-----PEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 H P++A Y + L + V L+ + E+ + ++++ + Sbjct: 441 SCYRHALRLNPQLAGAYHGIGEIQRLQGDAVNALQSYRKATELEPKQPHFYQSLAQLLAQ 500 Query: 338 MGSIDQAHAKAMLAMKIAP 356 +A +++ P Sbjct: 501 QEETQEALEIYKKLLELNP 519 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 75/220 (34%), Gaps = 11/220 (5%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + M A L + GD +A + KA ++ ++ + + ++ Sbjct: 580 QAMQLDGNADAEAYKCLADALLQTGDTEAAIQAYQKATELDSNSEEAYQKLADLLRDKEQ 639 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + AI+ ++ + + + + + ++++L + Sbjct: 640 FEDAISAYHRAVELKADVW----WVHNGLAEVLFKLERWSEAIESYQKAIELNPEFSWSH 695 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRL 317 A +L+ + +A + K ++NP H + + L + E V + A +L Sbjct: 696 NSLADALVKLERWEEAVIPYRKATELNPEFPWSHYNLGEVLAKLENWEEAVVAYRNAQKL 755 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++E + + M +++A ++ P Sbjct: 756 QSDLP-AIEEKLADALRERAMIDLNEALGYYRQVIQQNPD 794 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 9/203 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 L A + + ++ + E A L A +A+++ D Sbjct: 597 ADALLQTGDTEAAIQAYQKATELDSNSEEAYQKLADLLRDKEQFEDAISAYHRAVELKAD 656 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 WV + + + WS AI + + E++ + L A +L ++ + + Sbjct: 657 VWWVHNGLAEVLFKLERWSEAIESYQKAIELNPEFSWSHNSL--ADALVKLERWE--EAV 712 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPE--IANIYTH 301 ++ +L + + L +A V K+ P E +A+ Sbjct: 713 IPYRKATELNPEFPWSHYNLGEVLAKLENWEEAVVAYRNAQKLQSDLPAIEEKLADALRE 772 Query: 302 LLSENTVGKLKRALRLEEINKES 324 + L ++ + N + Sbjct: 773 RAMIDLNEALGYYRQVIQQNPDH 795 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 51/137 (37%), Gaps = 15/137 (10%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 LIA++ A+ + ++LK+ + +A +L + A EK Sbjct: 285 LIAKATAFCAIHKWEAAINTCQQALKIQPDLAVAYKIQGNALHLLGEISAAIRSYEKALA 344 Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMG 339 + P H + ++Y +L++A+ + + + V+KI +MG Sbjct: 345 IQPNYPEVHANLGSLYAQ------QERLEKAISYYQQAITQKPDFAGAYRNVAKIFTDMG 398 Query: 340 SIDQAHAKAMLAMKIAP 356 +A A ++ P Sbjct: 399 DHQKASHCLEKAYELEP 415 >gi|321250666|ref|XP_003191883.1| pre-mRNA splicing factor prp1 [Cryptococcus gattii WM276] gi|317458351|gb|ADV20096.1| Pre-mRNA splicing factor prp1, putative [Cryptococcus gattii WM276] Length = 946 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 32/268 (11%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E GD+ AQ +A + D+ + A + E AI L + K A Sbjct: 624 KEKWVGGDIPGAQAILAEAFKANEDSESIFLAAAKLAAETGEMEAAIQILEKAKAQADTE 683 Query: 222 NRNRAILLIARSLENADKG-----------------------------DMIASYHDAIES 252 ++ R L D+ ++ + + + Sbjct: 684 RVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRGQIYESRNEVALARNAYAQG 743 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 + C SI I +A+ KA +LEK NP + + + E T + Sbjct: 744 CRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKNDELWAESIKIEERTGSTQQ 803 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 L +E S ++ S +A+ M + Q +++ A+K A +L + Sbjct: 804 AKSVLARAMQECPASPLLWS-MAIFMEAPQQRKGRSVDAIKKAGEHPAVILAVARNFWSE 862 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGY 400 +K W +A+ A D W GY Sbjct: 863 RKIEKTRQWMANAITA--DEDWGDAWGY 888 >gi|146313570|ref|YP_001178644.1| cellulose synthase domain-containing protein [Enterobacter sp. 638] gi|145320446|gb|ABP62593.1| cellulose synthase operon C domain protein [Enterobacter sp. 638] Length = 1324 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 92/256 (35%), Gaps = 23/256 (8%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL + A + E +LQ A+ + + + R GD +A +Y +A DA Sbjct: 269 TALNSGNTDAAKRQFEQVLQTNPQDADALAGMGYIAQRSGDYQAAAQYLGRAASQGGDAS 328 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + L Q ++ KE N ++A+ L A ++ + + A Sbjct: 329 TARQTQADDAAFYGQ-------LAQAQQALKEGNVSQALALSAPLVQQSGERGTAAKLFR 381 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV-----ILEKIWKVNPHPEIANIYTHLL 303 A + L+ + + + LI+Q + A +L++ K E A L Sbjct: 382 A-DVLRHNKDY-PQAEQTLRELINQQPQNGAARENLYYVLKEQNKT----EDAQAMLRTL 435 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 E+ KL+ R+ ++ A G+ +QA + P L Sbjct: 436 PESLQAKLQ--PRVVAGLPGDPIRR--QAQQAAANGNTEQAIGILRQGIARLPDDPWLRL 491 Query: 364 -LAQIEQANSHNTDKI 378 LA++ Q + + + Sbjct: 492 DLARLLQKSGADGEAA 507 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 46/347 (13%), Positives = 103/347 (29%), Gaps = 36/347 (10%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 + G A G ++ + N A++ V Q + + L + IA Y A Sbjct: 256 RKNIGGAAKGEGYTALNSGNTDAAKRQFEQVLQTNPQDADALAGM--GYIAQRSGDYQAA 313 Query: 140 HEKLE------------MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + L Q + + ++ + G+++ A + + S + Sbjct: 314 AQYLGRAASQGGDASTARQTQADDAAFYGQLAQAQQALKEGNVSQALALSAPLVQQSGER 373 Query: 188 PWVTE-AVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + K++ +A L + ++ R ++ + D M+ Sbjct: 374 GTAAKLFRADVLRHNKDYPQAEQTLRELINQQPQNGAARENLYYVLKEQNKTEDAQAMLR 433 Query: 245 SYHDAIESLKLCDNSI---MASICA--AKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 + +++++ KL + A+ + +A IL + P P + Sbjct: 434 TLPESLQA-KLQPRVVAGLPGDPIRRQAQQAAANGNTEQAIGILRQGIARLPDDPWLRLD 492 Query: 299 YTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHAKAML--AMKIA 355 LL ++ A+ + SL + A E G+ Q+ Sbjct: 493 LARLLQKSGADGEAAAVMQPASRPGAGASSLYAAALFASESGAWQQSQTLLSRVSPASQT 552 Query: 356 PRKEIFLL-------LAQIEQ--ANSHNTDKILYWTQSALHAMPDPL 393 P+ L +A E+ A ++ + P Sbjct: 553 PQMRELALRVNTNLQMATAERYLAQGNSVAAANTLKTLSARPPESPA 599 >gi|114331039|ref|YP_747261.1| HemY domain-containing protein [Nitrosomonas eutropha C91] gi|114308053|gb|ABI59296.1| HemY domain protein [Nitrosomonas eutropha C91] Length = 393 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 49/394 (12%), Positives = 121/394 (30%), Gaps = 31/394 (7%) Query: 2 LRLIRYFFVISLVICSFIIVSHYP-EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 ++L+ + + + ++ ++Y V T + + ++ + +L Sbjct: 1 MKLVLWVLALFASATAIVLAAYYNTGSVLFTVPPYKIELAFNTFIIMVLSVFTVFYMLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE- 119 + + K + ++G+ + + M + Sbjct: 61 ILSGLSGINRRI-------RAKKAEQLTWSGVRAFF--EARYDQAMEFSEKAFKLADTQT 111 Query: 120 --YLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRY 176 L ++ + A +R Y L + P R + + G + A Sbjct: 112 TKVLNAVVAARSAHQQRNYLRRDHLLTAAREQAPVGRVLTLITEAELFLDEGRYHDALT- 170 Query: 177 ATKALDISPDAPWVTEAVVQQYVL--AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 A +++ +++ A W + L + N +R L Sbjct: 171 ALQSIYSFGGLQSTAVLLLELKAQQMAGNWDAVLE-LTEVLSNRSSVDRAHV-----DEL 224 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIM--------ASICAAKSLISQNKKRKAEVILEKI 286 + + I I LK ++ ++ AA++L++Q A+ I+E Sbjct: 225 RHQAHLENIKKNTKDIVLLKKYWGTLPWQEKTDGRIAVAAARALMAQGDNAAAQKIIENG 284 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +PE+ +Y S +++RA + + L+ + ++ +A Sbjct: 285 LDAGLYPELVALYADCQSGIVSWQIQRAESWLVKYPNNADLLLALGRLCTYGELWGKAQN 344 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ I P L LAQ+ + + Sbjct: 345 YLEASLSIDPGYPAHLALAQLFEKLGKQEAASEH 378 >gi|300916741|ref|ZP_07133452.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1] gi|300415963|gb|EFJ99273.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1] Length = 1157 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 42/352 (11%), Positives = 102/352 (28%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQSDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPANADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQR 692 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 738 >gi|223995619|ref|XP_002287483.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana CCMP1335] gi|220976599|gb|EED94926.1| hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana CCMP1335] Length = 891 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 103/295 (34%), Gaps = 34/295 (11%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A IP + ++Y L G++ A ++ KA SP+ + Q Sbjct: 176 AKGAYNA-TNIPEMQAESLYMLARVYHARGEMELANKFYDKACKHSPELSPARFGLAQTL 234 Query: 199 VLAKEWSRA--ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + W A + + N A+ + LE D ++ +++ L Sbjct: 235 I----WDEAYDEAAAHLRLLLGTCSNATDALAALGL-LEVKGGKDRREAFIYLKKAIDLD 289 Query: 257 D---NSIMASICA-----AKSLISQNKKRKAEVILEKIWKVNP----------HPEIANI 298 + ++ A + L+S ++ RKA +LE K+ P H + ++ Sbjct: 290 PFNADLVLIEALALQQNESDYLLSLDRYRKAVRLLEAQQKIVPADVLTNMGALHIHLKSV 349 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357 E+ + K RL + SV ++++ G I A +K P Sbjct: 350 VALNEGESAISVKKSNGRLRNASSISV--AFNLARLHEAAGRIVPAVELHKAIVKRHPSY 407 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWISDDGYLSS---VWLPL 408 +L LA I + + + W +SA+ A +P ++ G L W P Sbjct: 408 VNSYLRLACIAR-DCGSLKDCSEWLKSAVAVAPGNPEVLTLVGNLHLSLCDWAPA 461 >gi|307153350|ref|YP_003888734.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7822] gi|306983578|gb|ADN15459.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822] Length = 367 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 83/247 (33%), Gaps = 14/247 (5%) Query: 117 HNEYLVYLL-EVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNS 172 HNE L LL + + + Y A + + Q + LY G+ + Sbjct: 39 HNEQLGDLLRQGRQYVDNGNYTEALNLYQQAATLAQDNPKIFSGIGYLYSL---QGNYQA 95 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A R +AL + P P A+ A ++S A T + + ++ I Sbjct: 96 AVRAYQQALTLEPSNPEFYYALGYNLAYAGDYSNAATAYYYAMQLEPKNVKH----YIGL 151 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + + + L L N+ A +L+ Q + +A L+ + P Sbjct: 152 GVVLLRQKNYDKAIEVYQWVLALDPNNQEAHEIMGVALLEQKRTSEAMSFLQNATEKFPS 211 Query: 293 P---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ L N L ++ ++ + + + + + + D+A Sbjct: 212 STELKLQLASASLAQGNLDQGLSLLQDVQRLDPNNYKIQLKIGILLEKKERYDEALTAYR 271 Query: 350 LAMKIAP 356 A +AP Sbjct: 272 RASYLAP 278 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 90/257 (35%), Gaps = 38/257 (14%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQH---TFHNEYLVYLLEVQIALAERQYNIAHE 141 Y AL G A + A + Y Q H L +L Q + Y+ A E Sbjct: 114 YYAL--GYNLAYAGDYSNAATAYYYAMQLEPKNVKHYIGLGVVLLRQ-----KNYDKAIE 166 Query: 142 KLE-MMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + ++ P +E V +L + + A + A + P + + + Sbjct: 167 VYQWVLALDPNNQEAHEIMGV-ALLEQKR----TSEAMSFLQNATEKFPSSTELKLQLAS 221 Query: 197 QYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + ++ L ++ + + I ++ E D+ + + L Sbjct: 222 ASLAQGNLDQGLSLLQDVQRLDPNNYKIQLKIGILLEKKERYDE-----ALTAYRRASYL 276 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL--------LSEN 306 SI A+ + ++Q A V+ +++ +V P +P+I Y +L + Sbjct: 277 APKSIEANAGIGRVYLAQKDYLGAIVVYKELAEVAPNNPDI---YYNLGFALKQRERKQE 333 Query: 307 TVGKLKRALRLEEINKE 323 L++A +L + + Sbjct: 334 AKEALEKARQLYQSRND 350 >gi|325106717|ref|YP_004267785.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305] gi|324966985|gb|ADY57763.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305] Length = 1391 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 77/258 (29%), Gaps = 26/258 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---- 153 A + + L A + Q A + E +L Sbjct: 56 GEHLAA--VEKIERALKLKPDAVLFRKNLASAARSAGQLEKARKSCENVLAAEPNEPVMF 113 Query: 154 -EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAIT 209 E +A+ Y ++L I + E ++ Y + A Sbjct: 114 TLLGRICETEEKW----TEAARHY-EESLRIGLNNSETLETLLHLGDCYSKVGRSTDA-- 166 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + ++ + + + + E G + A+ ++L + N A Sbjct: 167 --ERCYRDIIDRDPWHLFAVHNLARELQFAGKLAAAESFYEQTLDIDPNCASAWNNLGVV 224 Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 ++ +A +EK ++ P H +AN+ L + ++ + ++ + Sbjct: 225 YQTRGNFSEARRCMEKARQLLPSLPDVHNNLANVLEALGEAGSCKEM--FEKAIQLRPDY 282 Query: 325 VESLVIVSKIALEMGSID 342 E+ +S++ L + Sbjct: 283 PEAYHSLSQVYLRERDFE 300 >gi|296122109|ref|YP_003629887.1| hypothetical protein Plim_1858 [Planctomyces limnophilus DSM 3776] gi|296014449|gb|ADG67688.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus DSM 3776] Length = 326 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 58/204 (28%), Gaps = 12/204 (5%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 + +++ Q A + ++ A+ L G A+ Sbjct: 73 LRDPVRMHVAYGQWNERSGNSKEARASYDEAIEKNPKSVDALLGLARLDILGGRHADAET 132 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 KA +P V Q + EW+ AI K A E +R L A + Sbjct: 133 LIAKAAKQAPQNAQVRATRGQLFESRGEWALAIEEYRAAVKLAPEETNHRFQLGTALAK- 191 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--P 293 Y + L + +A L + ++ AE K + NP P Sbjct: 192 -------SGDYEAGLAELTRVQGAAIAHYNVGYILHEKGERGAAERYFAKALQFNPELKP 244 Query: 294 E--IANIYTHLLSENTVGKLKRAL 315 I Y + + L R Sbjct: 245 AGTILAQYREARGQISADALARME 268 >gi|115660714|ref|XP_784504.2| PREDICTED: similar to UDP-N-acetylglucosaminyltransferase [Strongylocentrotus purpuratus] gi|115936542|ref|XP_001177116.1| PREDICTED: similar to UDP-N-acetylglucosaminyltransferase [Strongylocentrotus purpuratus] Length = 1032 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 37/242 (15%), Positives = 89/242 (36%), Gaps = 16/242 (6%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL+ + + A ++ A +L G++ A + KA Sbjct: 153 LGNLLKA-----LGRLDEAKACYLKAIETQPNFAVAWSNLGCVFNSQGEIWLAIHHFEKA 207 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P+ + A+ + RA+ + + + N A++ + ++G Sbjct: 208 VTLDPNFLDAYINLGNVLKEARIFDRAVGAYLRALQLSP----NHAVVHGNLACVYYEQG 263 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + +++L + A A +L Q K +AE ++ P H + N Sbjct: 264 LIDLAIDTYKRAIELQPHFPDAYCNLANALKEQGKVAEAEDCYNTALRLCPTHADSLNNL 323 Query: 300 THLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ E G ++ +++L E + ++ + + G + +A A++I+ Sbjct: 324 ANIKRE--QGNVEGSIQLYCKALEIFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRIS 381 Query: 356 PR 357 P Sbjct: 382 PT 383 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 29/252 (11%), Positives = 76/252 (30%), Gaps = 31/252 (12%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+ +A + +Y + Y + + A + L++ Sbjct: 262 QGLIDLA---------IDTYKRAIELQPHFPDAYCNLANALKEQGKVAEAEDCYNTALRL 312 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T ++ +L G++ + + KAL+I P+ + + A+ Sbjct: 313 CPTHADSLNNLANIKREQGNVEGSIQLYCKALEIFPEFAAAHSNLASVLQQQGKLQEALL 372 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + + A + D+ + ++++ A A Sbjct: 373 HYKEAIRISPTF----ADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASV 428 Query: 270 LISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSE--NTVGKLKRA-------- 314 +A K+ P+ P+ +A+ ++ + + ++KR Sbjct: 429 HKDSGNIPEAIESYRTALKLKPNFPDAYCNLAH-CLQIVCDWTDYESRMKRLVSIVADQL 487 Query: 315 --LRLEEINKES 324 RL ++ Sbjct: 488 EKNRLPSVHPHH 499 >gi|120610676|ref|YP_970354.1| HemY domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589140|gb|ABM32580.1| HemY domain protein [Acidovorax citrulli AAC00-1] Length = 425 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 51/416 (12%), Positives = 112/416 (26%), Gaps = 44/416 (10%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + + + + V++ W S +L + + Sbjct: 1 MRAALWFLVLFGTAVAAALFAGNNQGTVTLFWPPYRVDLSLNFVLLLFFGGFAILYAALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 L P ++ + AL L + A +RK Q Sbjct: 61 ALSALLELPGQARRWRVQQKERSMHAALLDALSQLLAGRFLRSRKAAMAALAQENALEAA 120 Query: 121 ------------LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVY-SLYFE 163 L +L+ + + A + L L R E + Sbjct: 121 GEAVPHGRQLRTLAHLVAAESSHALQDRATREAHLRNALDNIPARAPVSELELREGAQLR 180 Query: 164 SCR----IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + R D +A + + A ++ L+ + A+ K+ Sbjct: 181 AARWSLDERDAATALEHLAALPQGAARRTLALRARLKATRLSHQTQEALETARLLGKHRA 240 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNK 275 ++ ++E + A + + +I AA+ L + Sbjct: 241 FSPAAAQSIVRGLAIELLNGAHDPAQLQQTWMSFEAAERAMPEL---AIHAAQRLTALGG 297 Query: 276 KRKAEVI-LEKIWK-----VNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKES 324 L W+ NP P+ + + E+ + L R ++ N Sbjct: 298 DHGQVRTWLLPAWERMVDAANPLPDAHALKLVRVLESNLDALDAAWLARIESAQQANPRD 357 Query: 325 VESLVIVSKIALEMGSIDQAHA---KAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376 + L +A +A + P R + LA++ + +T+ Sbjct: 358 ARLQYLSGMACLRRQLWGKAQQLFTQAAQQLDEGPLRCRAWRHLAELAE-QRGDTE 412 >gi|159903982|ref|YP_001551326.1| Flp pilus assembly protein TadD [Prochlorococcus marinus str. MIT 9211] gi|159889158|gb|ABX09372.1| Flp pilus assembly protein TadD [Prochlorococcus marinus str. MIT 9211] Length = 594 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 30/157 (19%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----------- 208 L G+L A+ YA KA+ + P+ + + +AI Sbjct: 98 LALILKEKGELKEAELYARKAISLKPNLCDAYLILGGILQDQGDLDQAILCTRKAIILDP 157 Query: 209 ----------TFLNQK--KKNAKEWNRNRAILLIARSLENA-------DKGDMIASYHDA 249 L +K K A++ R L + + +KG++ + Sbjct: 158 NLASSHLNLGVLLKEKGNLKEAEDATRKAISLQSNLANAHLNLGVLLKEKGNLKEAEDAT 217 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +++ L N A + L K ++AE L K Sbjct: 218 RKAISLQSNLANAHLNLGILLKDLGKLKEAEKTLIKA 254 >gi|297183434|gb|ADI19566.1| FOG: tpr repeat-protein [uncultured Acidobacteria bacterium HF0770_27F21] Length = 333 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 54/191 (28%), Gaps = 22/191 (11%) Query: 126 EVQIALAERQYNIAHEKLEM-MLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDI 183 E Y A K E M+ P GD+ A+ K L Sbjct: 144 EAIALSDAGDYAGAVAKYEEFMVANPHLDAVHGNIG--NAYRDAGDVEKAREAYEKLLAA 201 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDM 242 PD + + +V A + A+ + + + + + S + + Sbjct: 202 EPDNVMANYNMGEMFVEAGDMEEALPYFESVLQQNPDDPAVYYNVAELYFSQQVLGCLEP 261 Query: 243 IASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + AI +L+ N + A + +L+ A + EK Sbjct: 262 VPECQGAISYYNRALETDPNYLPAHMQIGFALVRLGDIDNAVLAFEK------------- 308 Query: 299 YTHLLSENTVG 309 Y L E+ Sbjct: 309 YVELAPEDDAQ 319 >gi|197120101|ref|YP_002140528.1| bifunctional SAM-dependent methyltransferase, type 11,/glycosyltransferase, family 2, TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089461|gb|ACH40732.1| SAM-dependent methyltransferase, type 11, and glycosyltransferase, family 2, TPR domain-containing protein [Geobacter bemidjiensis Bem] Length = 1523 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 9/136 (6%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + R ++ + + + SP +P A+ A W A+ L Q Sbjct: 882 LRG-AKLARRGKLNDAVELMLQEGIRFSPASPAPYLALAGILCEAGNWREALEVLEQ--- 937 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNK 275 A L+ R+ + + G+ + A ++ + ++ +SQ + Sbjct: 938 -VPAGCELDAALMRGRAFK--ESGEPAQAVEAAKQAEGIDPE-APGTLHLNGVLALSQGE 993 Query: 276 KRKAEVILEKIWKVNP 291 K E +L + +P Sbjct: 994 AEKGEELLRRAITADP 1009 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 E+A T L +L RL +++ E+ E+ + + + L G +A A+ + Sbjct: 1357 ELARQATELDRGEEAQRL--WHRLLQVHPENAEAYLNLGYLQLNAGEYPKARESALKGAQ 1414 Query: 354 IAP 356 +AP Sbjct: 1415 LAP 1417 >gi|302665320|ref|XP_003024272.1| hypothetical protein TRV_01623 [Trichophyton verrucosum HKI 0517] gi|291188319|gb|EFE43661.1| hypothetical protein TRV_01623 [Trichophyton verrucosum HKI 0517] Length = 739 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%) Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183 ++Y A + L P ++ A+ S Y + GD + + + L Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQLKE 316 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237 +P + + + + + R + + + W R + + E Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376 Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D + E LKL + A+ I Q A L + + P Sbjct: 377 ENEDAERARQIYTECLKLIPHKKFTFAKIWLLKAEFEIRQLDLVLARKTLGQAIGMCPKD 436 Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ Y + E + + K + + N ES + +++ + +++A A L Sbjct: 437 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 495 Query: 351 AM 352 + Sbjct: 496 GI 497 >gi|317154776|ref|YP_004122824.1| tetratricopeptide domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316945027|gb|ADU64078.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio aespoeensis Aspo-2] Length = 506 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 53/134 (39%), Gaps = 8/134 (5%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 R D G+ A+ L L + + +L+ + KA + P Sbjct: 152 RCASLLDAGEYDAALEVTDRILLLKPDCAPGLVMRGDALMGIGEADKAVQAYMAAHESRP 211 Query: 292 ---HP--EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P ++A + + E + +K L+EI+ + E + +++ L+ ++A A Sbjct: 212 IFMAPLIKLAAAFDRMEDERALAYMK---ELDEISPLNPERKIELARQHLQRDETEKAEA 268 Query: 347 KAMLAMKIAPRKEI 360 ++++A R+ + Sbjct: 269 YLTESVELAEREHL 282 >gi|147781154|emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera] Length = 788 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 7/165 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + ++ Y A ++ P Y L ++GD S+ K L++ Sbjct: 312 ARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEV 371 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ +A+ YV + +A +L + K + +A L + L +D G + Sbjct: 372 YPENCEALKALGHIYVQLGQTEKAQEYLRKATK--IDPRDAQAFLDLGELLITSDTGAAL 429 Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286 ++ A LK + + + + AE ++ Sbjct: 430 DAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEA 474 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 88/302 (29%), Gaps = 51/302 (16%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 Y +E ++ + Q+ LA+ A +++L A+ G Sbjct: 117 YNKASRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRG 176 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKNAKEWNRNRAI 227 + + +AL + PD P + ++ +A + + E N + Sbjct: 177 RYSDSLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPE-NVEALV 235 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----------------------SIC 265 L L D + + ++ MA + Sbjct: 236 ALGIMDLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295 Query: 266 A---------------AKSLISQNKKRKA-----EVILEKIWKVNPH----PEIANIYTH 301 A A+S S+ KA + E PH P Sbjct: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKES---NKPHDFVLPYYGLGQVQ 352 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L + L ++ E+ E+ E+L + I +++G ++A A KI PR Sbjct: 353 LKLGDFRSSLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQA 412 Query: 362 LL 363 L Sbjct: 413 FL 414 >gi|15228944|ref|NP_188329.1| HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107); binding [Arabidopsis thaliana] gi|20260426|gb|AAM13111.1| unknown protein [Arabidopsis thaliana] gi|30725484|gb|AAP37764.1| At3g17040 [Arabidopsis thaliana] gi|332642376|gb|AEE75897.1| protein high chlorophyll fluorescent 107 [Arabidopsis thaliana] Length = 652 Score = 47.6 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 18/267 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 NI AR + + + NEY+ LLE + +Y A + + Sbjct: 285 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKA----GRYEQARYLFKQATICNSRSC 339 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + + + +A++ KA+ SP + R L Sbjct: 340 ASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL--- 396 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K N +LL + L + + +L I + Sbjct: 397 -KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWKEG 455 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328 A + ++ ++ + E A+ E G L A RL IN +S + Sbjct: 456 NTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTW 515 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +++ + G ++A L + Sbjct: 516 MTWAQLEEDQGDTERAEEIRNLYFQQR 542 >gi|325181098|emb|CCA15510.1| anaphasepromoting complex subunit putative [Albugo laibachii Nc14] Length = 307 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 78/212 (36%), Gaps = 8/212 (3%) Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A KA D++ AP A + L E A++F + + + E Sbjct: 69 LAQKATDLNKLAPEAWCAAGNCFSLHGEHDIALSFFQRAIQLNSAF----VYAYTLSGHE 124 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 D + + ++++ A Q K A E+ ++NP+ + Sbjct: 125 YVANEDYEKAANCYRHAIRVDPRHYNAWYGLGTICYRQEKYEFARYHFERALQINPNSSM 184 Query: 296 ANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + ++ + L++ ++ ++++ + + + + A + Sbjct: 185 LHYLVGVVMHSMKRYNEALQKLKVAIDLQPLNLQARIQRANVLISQEQFHAARDDLLDVR 244 Query: 353 KIAPRK-EIFLLLAQIEQANSHNTDKILYWTQ 383 +AP++ I+ LL Q+ + ++ + + Y+T+ Sbjct: 245 DLAPQESSIYYLLGQVSKKLNNMDEAMQYYTK 276 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 50/162 (30%), Gaps = 4/162 (2%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L +A Y A +++ A Y L R A+ + +AL I+ Sbjct: 120 LSGHEYVANEDYEKAANCYRHAIRVDPRHYNAWYGLGTICYRQEKYEFARYHFERALQIN 179 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P++ + V K ++ A+ QK K A + I R+ + A Sbjct: 180 PNSSMLHYLVGVVMHSMKRYNEAL----QKLKVAIDLQPLNLQARIQRANVLISQEQFHA 235 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D ++ L + N +A K Sbjct: 236 ARDDLLDVRDLAPQESSIYYLLGQVSKKLNNMDEAMQYYTKA 277 >gi|226226818|ref|YP_002760924.1| hypothetical protein GAU_1412 [Gemmatimonas aurantiaca T-27] gi|226090009|dbj|BAH38454.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 561 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 56/205 (27%), Gaps = 9/205 (4%) Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKG-----YKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 A L L + G AL ++ ++ A + Q Sbjct: 323 LAFCTARLGDIGQAKRHLDEATRRAGAQPDPRIALTAAQFALTDGDMAEAEVQLARARAQ 382 Query: 114 HTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + L A + A LE L +L R G + Sbjct: 383 WGARQPSAAWFHLAGLAAAIGGESARAQALLEEGLTAHPHAAPLHNNLAVVQERRGSYEA 442 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A R A AL ++ + + + + + A L + + A + + + Sbjct: 443 AARTAEHALLEDANSAHLHKNLGDYLYRGQRYDEAFDALTRVVRLAPNHGPD---VYLKL 499 Query: 233 SLENADKGDMIASYHDAIESLKLCD 257 + +G + + ++L L Sbjct: 500 GNVHYRRGALDDARAAWEQALALDP 524 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 11/203 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+GD+ A+R+ +A + P A+ + A + + A+ R Sbjct: 329 RLGDIGQAKRHLDEATRRAGAQPDPRIALTAAQFALTDGDMAEAEVQLARARAQWGARQP 388 Query: 226 AILLIARS-LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV--- 281 + + L A G+ + E L ++ A + A Sbjct: 389 SAAWFHLAGLAAAIGGESARAQALLEEGLTAHPHAAPLHNNLAVVQERRGSYEAAARTAE 448 Query: 282 --ILEKIWKVNPHPEIAN-IYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALE 337 +LE + H + + +Y + L R +RL + + + + Sbjct: 449 HALLEDANSAHLHKNLGDYLYRGQRYDEAFDALTRVVRLA---PNHGPDVYLKLGNVHYR 505 Query: 338 MGSIDQAHAKAMLAMKIAPRKEI 360 G++D A A A+ + P I Sbjct: 506 RGALDDARAAWEQALALDPENRI 528 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 56/212 (26%), Gaps = 17/212 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM-----LQIPAT 152 +I A++ +++ + + L Q AL + A +L + P+ Sbjct: 331 GDIGQAKRHLDEATRRAGAQPDPRIALTAAQFALTDGDMAEAEVQLARARAQWGARQPSA 390 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 F + L + G+ AQ + L P A + + + A Sbjct: 391 AWFHLAGLA--AAIGGESARAQALLEEGLTAHPHAAPLHNNLAVVQERRGSYEAAARTAE 448 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLI 271 A L ++ ++L N Sbjct: 449 HALLEDANS----AHLHKNLGDYLYRGQRYDEAFDALTRVVRLAPNHGPDVYLKLGNVHY 504 Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANI 298 + A E+ ++P H +A + Sbjct: 505 RRGALDDARAAWEQALALDPENRIVHANLAAL 536 >gi|168702395|ref|ZP_02734672.1| TPR domain protein [Gemmata obscuriglobus UQM 2246] Length = 1992 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 94/340 (27%), Gaps = 53/340 (15%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATR 153 +A + A + H + Q H LL+ + A L +L + Sbjct: 823 LAETDGRGAARAHLTQACQRFPHYYP---LLKFRAEFLSGDPEGDAERALRDLLDVCPDD 879 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 +A+ L+ A +A +A ++ P+ W + Q + A + A + Sbjct: 880 AWALRQRALVCADRKRLDEALAHAVRAGELEPNHVWYHSVLAQVHKRADRTAEAAEAIRA 939 Query: 214 KKK---------------NAKEWNRNRAILLIARSL----------------------EN 236 + + A+ I L N Sbjct: 940 GLRLNIDQEPQIAELVQLARGRREKRDALEFIEAELRRQPHTGEGLIAFVGVSHHVFQGN 999 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +D D + L + A A+ L + +A + + V+ P + Sbjct: 1000 SDPEDHTRLLETLEQILDDRPDLWHAWSAVAQQLTGLGRLDEAHALAREA--VDRFPLLG 1057 Query: 297 NIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 ++ L N G+L + ++ + +++ + D A A A Sbjct: 1058 KLWLDLAQVCHALGNADGRLDALRQAVAVSPGWSLAARELAEALDDADQRDDAIAVLERA 1117 Query: 352 MKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 P LA+ + + A A+ Sbjct: 1118 TVRNPTDALAHGFLAE----RLWDEGRSREALDRAKTAVR 1153 Score = 39.9 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 91/299 (30%), Gaps = 17/299 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA------T 152 + + E + L Q+A R+ A E +E L+ Sbjct: 928 DRTAEAAEAIRAGLRLNIDQEPQIAELV-QLARGRREKRDALEFIEAELRRQPHTGEGLI 986 Query: 153 REFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 V + ++ + D + LD PD AV QQ A Sbjct: 987 AFVGVSHHVFQGNSDPEDHTRLLETLEQILDDRPDLWHAWSAVAQQLTGLGRLDEAHALA 1046 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + L + + G+ +++ + +A+ A++L Sbjct: 1047 REAVDRFPLLGK----LWLDLAQVCHALGNADGRLDALRQAVAVSPGWSLAARELAEALD 1102 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESL 328 +++ A +LE+ NP +A+ + + L RA + + Sbjct: 1103 DADQRDDAIAVLERATVRNPTDALAHGFLAERLWDEGRSREALDRAKTAVRLEPGYDWAW 1162 Query: 329 VIVSKIALEMGSIDQ-AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 V A M D+ A LA A ++L LA+ N + +L A+ Sbjct: 1163 HAVQLWADRMELPDEPAELTRELARDRAGDPRVWLRLARTLHHPRFNDE-VLAALDRAI 1220 >gi|332707120|ref|ZP_08427178.1| glycosyltransferase [Lyngbya majuscula 3L] gi|332354145|gb|EGJ33627.1| glycosyltransferase [Lyngbya majuscula 3L] Length = 1933 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 46/127 (36%), Gaps = 4/127 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 ++ A KA+++ PD PW + + ++W AI ++ E + Sbjct: 781 LKLERWQDAADVFRKAIELKPDFPWSYQNLGDALQALEQWDEAI----IAYRHGIEVKSD 836 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A G + + ++++L N A ++L + +A + E Sbjct: 837 WPWSYYNLGQALAKTGQWLDAIACYQKAIELDPNFAKAYSHLGEALARIGEWDEAIISYE 896 Query: 285 KIWKVNP 291 + ++P Sbjct: 897 QAIDIDP 903 Score = 44.2 bits (103), Expect = 0.055, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 20/229 (8%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D + KA +PD+ V + Y ++W AI + + A Sbjct: 545 DQDQELESFIKAAQQNPDSAKVQANLGSAYAQRQQWLDAIACYQKAIAINPSF----AGA 600 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286 + A+ ++L L N++ A +L S K + + Sbjct: 601 YRNLAKVLTQTNQPEAAADYWYQALTLEPNTVSAEEHLNLGNTLTSLGKLTQGIACYRQA 660 Query: 287 WKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ P ++ Y L L + + N + ++ + + E + Sbjct: 661 IQLK--PNLSEAYHRLGALLKNQGEEQELLSLYQQAVQNNPQDAKAYFYLGNLFTEEEAW 718 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++A+ + A ++ P LAQ K W + A+ A Sbjct: 719 EEAYPSYLKATQLQPN------LAQAHHNLGDTLVKQQRW-EEAVTAYR 760 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 74/238 (31%), Gaps = 32/238 (13%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR----- 175 L +L Q E A + + P T E +G+ ++ Sbjct: 604 LAKVLT-QTNQPE---AAADYWYQALTLEPNTVSA------EEHLNLGNTLTSLGKLTQG 653 Query: 176 YA--TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 A +A+ + P+ + E ++ Q +N A Sbjct: 654 IACYRQAIQLKPNLSEAYHRLGALLKNQGEEQELLSLYQQAVQNNP----QDAKAYFYLG 709 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 ++ +Y +++ +L N A +L+ Q + +A + ++ P Sbjct: 710 NLFTEEEAWEEAYPSYLKATQLQPNLAQAHHNLGDTLVKQQRWEEAVTAYRRAIEIQ--P 767 Query: 294 EIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQA 344 E + Y ++ + + KL+R + E+ + S + + D+A Sbjct: 768 EFSWSYNNM--GDALLKLERWQDAADVFRKAIELKPDFPWSYQNLGDALQALEQWDEA 823 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCR-IGDLNSAQRYATK 179 VYL + Q L +RQ+ A E ++I P T + Y ++ + + +G A Y + Sbjct: 173 VYLQQAQTYLKQRQWQQAIAACERAIKIAPDTAQV--YKIWGNALQFMGQTTEAMGYYGQ 230 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 AL+I PD V + Y ++W AI + + + + Sbjct: 231 ALEIEPDFAEVYANLGSLYAGQQDWQHAIAYYQKAIELKPD 271 >gi|262197085|ref|YP_003268294.1| hypothetical protein Hoch_3902 [Haliangium ochraceum DSM 14365] gi|262080432|gb|ACY16401.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 1921 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 68/231 (29%), Gaps = 38/231 (16%) Query: 168 GDLNSAQRYATKALDISPDAP---WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD A +A DI P W + ++Q+ +W+ + ++ A + + Sbjct: 277 GDEEGALAAHRRAFDIDPTHRANLWALQRLLQRR---GDWASFVDVIDTAALAASDDPQR 333 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L + A D ++ + SI A + ++ A + Sbjct: 334 AQLYLEKAHVFEAHLRDAESARDAYERAAAFDPRSIAALRGLERLCLAAGDLAGAVHAIT 393 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P A Y + ++++A + G +D A Sbjct: 394 ALAAAVDDPAQAMAYL----------------------------LDLARLAADSGDLDTA 425 Query: 345 HAKAMLAMKIA----PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + A L LA+ E + W ++ A D Sbjct: 426 RDALERAAESAFDAVAVARERLHLAEREGDAEAQIAALDAWLEADARAPED 476 >gi|198463697|ref|XP_001352910.2| GA19898 [Drosophila pseudoobscura pseudoobscura] gi|198151372|gb|EAL30411.2| GA19898 [Drosophila pseudoobscura pseudoobscura] Length = 931 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 686 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + + LK C SI + +A + Sbjct: 687 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAANTYTQGLKKCPTSIPLWVLSANLEERK 746 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 KA ILE+ N P++A ++ + LK Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEINAQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|15225686|ref|NP_180804.1| calcium-binding EF hand family protein [Arabidopsis thaliana] gi|75160474|sp|Q8S8L9|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At2g32450 gi|20197430|gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gi|28393656|gb|AAO42246.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gi|28973559|gb|AAO64104.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gi|330253593|gb|AEC08687.1| Calcium-binding tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 802 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + L + +W + + + +G ++++ E+ LC A Sbjct: 287 LLALEAAESGGNQWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLG 346 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322 +L + R A LE+ + P H ++A+ H + E+ ++ R ++ Sbjct: 347 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHAMGEDERA-IEVFQRAIDLKP 404 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++L + + +++G +A + + P L + + T++ Sbjct: 405 GHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRAL 464 Query: 383 QSALH 387 + AL Sbjct: 465 KEALK 469 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 19/146 (13%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 RA+ L+ +L G+ A+ E++ L + A A SL + + +A Sbjct: 337 THYRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIE 394 Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331 + ++ + P H + + +Y L G+ +RA L + + Sbjct: 395 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNK 447 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + L G ++A A+K+ R Sbjct: 448 AVSLLGAGETEEAKRALKEALKMTNR 473 >gi|329903034|ref|ZP_08273346.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] gi|327548512|gb|EGF33178.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] Length = 596 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 80/242 (33%), Gaps = 5/242 (2%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQ 174 E + LL +IA + A + M+ TR+ A + A Sbjct: 64 LTEELMFKLLSAEIAFQRGDWQPA--YINMISVAQQTRDPRAARRAAEMAIAAKQPEEAM 121 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 ++P + T+ V +L + S + ++ + +R IL + R L Sbjct: 122 VAVRFWRALAPKSDEATQYYVGMILLGDDLSEFQEVFALRLRDVRPPSRPLLILQVQRLL 181 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 A + + + + + I A++ S N +A K+ P E Sbjct: 182 LRAKDKKEAFAVMENLVAPY--PDLAETHIALAQAAFSNNDPARARSEAMLALKIKPDSE 239 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 IA + + + + + +S E + ++ +E DQA + +K Sbjct: 240 IAALTLAQVIPDKKESAQSLQSYLSAHPDSREIRIAYGRMLIEQNLYDQARKEFETLLKD 299 Query: 355 AP 356 P Sbjct: 300 QP 301 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%) Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L +++ L + E+ + +++ A +A ++AMLA+KI P EI Sbjct: 182 LRAKDKKEAFAVMENLVAPYPDLAETHIALAQAAFSNNDPARARSEAMLALKIKPDSEIA 241 Query: 362 LL 363 L Sbjct: 242 AL 243 >gi|195496397|ref|XP_002095677.1| GE19580 [Drosophila yakuba] gi|194181778|gb|EDW95389.1| GE19580 [Drosophila yakuba] Length = 931 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDEALR 686 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + LK C SI I +A + Sbjct: 687 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTQGLKKCPTSIPLWILSANLEERK 746 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 KA ILE+ N P++A ++ + LK Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|219849276|ref|YP_002463709.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] gi|219543535|gb|ACL25273.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485] Length = 520 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 15/171 (8%) Query: 200 LAKEWSRAITFLNQKKKNA--------KEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 L ++ AI A + + R RAI+ + A + + + +E Sbjct: 41 LRAAYADAIEHFKAALIAAYVDGEEQAQIYERERAIIYLYIGNSLAFQDHWEEALREYLE 100 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 +++ A + + + +A ++ + NP H + Y + ++ Sbjct: 101 AVQTDPQLAEAHYNLGVAFAALGQIDRAIAAFKETLEHNPNLYEAHFALGRCYQRI--DD 158 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ E + + G+ + A A+++ P Sbjct: 159 AGRAYIHFSSACNARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 83/298 (27%), Gaps = 46/298 (15%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ-------QHTFHNEYLVYLLE----------VQIALAE 133 GLM + LA++ + + +E LV E Q + Sbjct: 184 GLMHQSHGAHELAQRCFAEALRVEPTFVSPEPLPDEPLVNRSEEEVAQWYYRLSQALKQQ 243 Query: 134 RQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A +LQ A Y R D A + I P Sbjct: 244 GYEEEAERIYRALLQWRPQEYAARYLLGNLLARQRRFDEAYA-----EYEQIPPQHRHYV 298 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDMIA 244 +A ++ AI L +K K A N + L + D G Sbjct: 299 DARLR--------MSAILRLQKKPKQAYEILFACARLNPHHGQLFLQMGKLLYDMGMTRQ 350 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIANIY 299 + +++L A + + A K ++ P H ++ +Y Sbjct: 351 AVRAFERAVQLLPTDAQAHYLLGFVYNTMGRDTWALAAWRKAVQLAPDAHSLRFDLGYMY 410 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + K ++ E + +E+ ++ E+ +A ++ PR Sbjct: 411 IRRGRYDLAA--KEFQQVLEQWPDDIETQFMLGLCYKELLEPSRAIPLFEKVLRRNPR 466 >gi|121605693|ref|YP_983022.1| hypothetical protein Pnap_2799 [Polaromonas naphthalenivorans CJ2] gi|120594662|gb|ABM38101.1| Tetratricopeptide domain protein [Polaromonas naphthalenivorans CJ2] Length = 381 Score = 47.2 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 84/266 (31%), Gaps = 53/266 (19%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +Y A E ++ RE A ++L + + G L+ A+ A + L+ +P Sbjct: 85 GEYERAVRVHEHLMSRGDLTQHERERAQHALALDFLKAGLLDRAEA-ALRKLEGTPFEEE 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A++ Y +++W+ A + + ++ +A L ++ +A GD + + Sbjct: 144 ARLALLSIYERSRDWANATEIAARLGSSSQGSFSTRQAHYLCEQASASAATGDAAKALNT 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----------------------------- 279 ++++ + I AK A Sbjct: 204 LMQAVAMAPALARPLIDLAKLQYQLGNAHDALHTLLKLTTAAPQALPLAAGLLANIAQNS 263 Query: 280 ------EVILEKIWKVNPHPEIANIYTHLLSENTVGK------LKRALRLEEINKESV-- 325 +L+ + P ++ L + + L+R + L +K Sbjct: 264 DEQQTTLALLKASYAQAPSIDLIEAIVKLEKDPATARQWYVQHLEREVSLVAASKWIAGE 323 Query: 326 ----ESLVIVSKIALEMGSIDQAHAK 347 E + + A++ + + Sbjct: 324 KLEDERHHALVQRAMDQATKPLMRYR 349 >gi|321465641|gb|EFX76641.1| hypothetical protein DAPPUDRAFT_54951 [Daphnia pulex] Length = 825 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 107/381 (28%), Gaps = 68/381 (17%) Query: 13 LVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFF-----LS 67 LV F ++ + + L +L+ + F +L+ +R Sbjct: 411 LVALGFHLIDDL--------LRQKQQMQASNSLRLLFRWAFVLLLVVYSARTIQRNRDWH 462 Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 L+ N K Y L + + A + + + L Sbjct: 463 TEETLYRSGISVNPPKAYGNLAN--ILSSTGRKDEAEQAYKKALSYRNNMADVHYNL--G 518 Query: 128 QIALAERQYNIAHEKLE---------MMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + +++Y A + M + A+ + E+ + + Sbjct: 519 ILYQEQKRYEEAIQSYRSAVHYRPRMAMAHLNMGLVLALMGMKDEAIEV--YRRCSQLDG 576 Query: 179 KALDISPDAPWVTEAVV----QQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARS 233 L + + + + ++++AI N+ + + ++ + Sbjct: 577 SGLKDPRTHETTKISALFNLGRLHADDGQYTKAIDVYNEAIQRMPTHYQPQSLYNMLGEA 636 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291 D+ + H E+L+ + I A + K L N+ +AE + + ++P Sbjct: 637 YFKLDRLK--EAEHWYREALRAKADHIPAHLTYGKLLTKMNRLSEAEDMFLRAKSLSPND 694 Query: 292 ----------------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 H E A Y + E++ + Sbjct: 695 STVYQHYGQYLSECERHTEAAEQYVRA---------------ASLAPTEYETVFNAANTL 739 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 + G +A A+KI P Sbjct: 740 RQAGRHSEAEQYYRSAVKIRP 760 >gi|307300108|ref|ZP_07579893.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti BL225C] gi|306904997|gb|EFN35580.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti BL225C] Length = 637 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 15/192 (7%) Query: 206 RAITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDN 258 A L++ + + RA L + A D +A ++++L N Sbjct: 395 AARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATTTDAETGLSEARQAVRLDPN 454 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLK 312 + L + A ++ ++NP+ P+ +A S + V + Sbjct: 455 LAAGYQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAE 514 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 RA RL + E + + G +D+A + AP++ LL+ + Sbjct: 515 RARRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPQEADCLLIRTAVLSQR 572 Query: 373 HNTDKILYWTQS 384 + + Sbjct: 573 GDVEGAQRTMAR 584 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 17/155 (10%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266 L + + A++ L A + D + A + + + Sbjct: 376 VLQARDRYKHGSKDAEALIAARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATT 435 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321 + ++ R+A + P +A Y L + + G ++ A R E+N Sbjct: 436 TDAETGLSEARQAVRL---------DPNLAAGYQVLSFGLSATGDYPGAMQAAQRAVELN 486 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +SL+ ++K + GS D+A A A ++ P Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 7/119 (5%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D + A +A+ + P+ + + ++ A+ Q + A E N N Sbjct: 437 DAETGLSEARQAVRLDPNLAAGYQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEK 285 L+A + G + +A + +L + ++L + + +A+ +L + Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLRE 550 Score = 36.8 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD A + A +A++++P+ P A+ + V + A+ + ++ Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527 Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + D+ D + E L + L + A+ + Sbjct: 528 TYVYGQALYAAGRLDEADEVL-----RECLIRAPQEADCLLIRTAVLSQRGDVEGAQRTM 582 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ +V+P +A+ + ++ + RL E N V S + Sbjct: 583 ARLTEVDPEFSLASERSMRRFGDSALMEQFLSRLAEANAPDVTSGFL 629 >gi|170768083|ref|ZP_02902536.1| tetratricopeptide repeat protein [Escherichia albertii TW07627] gi|170122849|gb|EDS91780.1| tetratricopeptide repeat protein [Escherichia albertii TW07627] Length = 389 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 R+G + ++Q Y EW +AI + Sbjct: 139 F-----------RVG---------------------ALQQLLQIYQSTSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K K+ R A +L++ D + + NS SI + ++ Sbjct: 167 QVKLGKDKQRVEIAHFYCELALQHMASDDFDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|308272099|emb|CBX28707.1| hypothetical protein N47_G40310 [uncultured Desulfobacterium sp.] Length = 255 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 9/153 (5%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + + L A + KA+++ PD + Y+ K+W+ AI+ + KN Sbjct: 72 GLVYMAKDR--LQLAVDHFKKAIELKPDYAPAINNLGTAYLALKDWNSAISCFEKVYKNL 129 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + + + +K D + ++LK+ N +A + + + Sbjct: 130 LYATPHYPLTNLGWA--YYNKNDFALAEKYYKQALKIEPNYSIALHGLGLTYLKMGNAPE 187 Query: 279 AEVILEKIWKVNPH-P----EIANIYTHLLSEN 306 A + LEK K +P P ++A Y L + Sbjct: 188 AVIYLEKAMKYSPWVPERYFDLAKAYEKLEQYD 220 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 13/199 (6%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 V + Y+ +++ A+ L +K + + + + L+ + + Sbjct: 29 RQGEARRDVGEAYMNQNDYTAALNELLEAEKLYPNDHHLHNDLGLVYMAKDRLQ-----L 83 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK----VNPH-PEIANIY 299 + ++++L + A + ++ A EK++K PH P + Sbjct: 84 AVDHFKKAIELKPDYAPAINNLGTAYLALKDWNSAISCFEKVYKNLLYATPHYPLTNLGW 143 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--R 357 + + K + +I +L + L+MG+ +A AMK +P Sbjct: 144 AYYNKNDFALAEKYYKQALKIEPNYSIALHGLGLTYLKMGNAPEAVIYLEKAMKYSPWVP 203 Query: 358 KEIFLLLAQIEQANSHNTD 376 + F L E+ ++ Sbjct: 204 ERYFDLAKAYEKLEQYDKA 222 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + L L + + +A + + L+I A++ L ++G+ A Y Sbjct: 134 PHYPLTNL--GWAYYNKNDFALAEKYYKQALKIEPNYSIALHGLGLTYLKMGNAPEAVIY 191 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 KA+ SP P + + Y +++ +AI Sbjct: 192 LEKAMKYSPWVPERYFDLAKAYEKLEQYDKAIE 224 >gi|269960670|ref|ZP_06175042.1| hypothetical protein VME_14260 [Vibrio harveyi 1DA3] gi|269834747|gb|EEZ88834.1| hypothetical protein VME_14260 [Vibrio harveyi 1DA3] Length = 1253 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 7/185 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YL + + Q+ A +Q T+ +A SL + +A + +AL Sbjct: 389 AYLDQGDALAEKGQFKQAESLYRKAIQSDKTQPYAFTSLGALYLAQKNYAAADKAYIQAL 448 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNAKEWNRNRAILLIARSLEN 236 + + + ++W+ A + + K+ +++ N ++ +++AR Sbjct: 449 QLEALNGSALRGRLDVRIEQQDWAGAASLAQRFSPAQKQVVSEKINGIQSEIILARLRIA 508 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI 295 K D E ++L S + A + S KR+A+ ++ W N PE+ Sbjct: 509 IAKDDQAGMQSAVEELIELKPTSPWLRLDIADVVRSMGDKRRADKLM-SEWATNSTDPEM 567 Query: 296 ANIYT 300 Y Sbjct: 568 KFAYA 572 >gi|208779645|ref|ZP_03246990.1| hypothetical protein FTG_0897 [Francisella novicida FTG] gi|208744606|gb|EDZ90905.1| hypothetical protein FTG_0897 [Francisella novicida FTG] Length = 385 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|254373300|ref|ZP_04988788.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|151571026|gb|EDN36680.1| conserved hypothetical protein [Francisella novicida GA99-3549] Length = 385 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|134301553|ref|YP_001121521.1| hypothetical protein FTW_0482 [Francisella tularensis subsp. tularensis WY96-3418] gi|134049330|gb|ABO46401.1| hypothetical membrane protein [Francisella tularensis subsp. tularensis WY96-3418] Length = 385 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|121635525|ref|YP_975770.1| hypothetical protein NMC1831 [Neisseria meningitidis FAM18] gi|120867231|emb|CAM11000.1| putative periplasmic hypothetical protein [Neisseria meningitidis FAM18] gi|325202841|gb|ADY98295.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] Length = 389 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 109/356 (30%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGEMAREARQHLLNIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + + A+E+ K C Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 279 MQTFPELDLINVVYEKSLLLKGE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + A + D + L ++ + + S W P F Sbjct: 331 DMNPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|118497947|ref|YP_898997.1| hypothetical protein FTN_1371 [Francisella tularensis subsp. novicida U112] gi|194323169|ref|ZP_03056953.1| hypothetical protein FTE_0759 [Francisella tularensis subsp. novicida FTE] gi|118423853|gb|ABK90243.1| conserved protein of unknown function [Francisella novicida U112] gi|194322533|gb|EDX20013.1| hypothetical protein FTE_0759 [Francisella tularensis subsp. novicida FTE] gi|332678663|gb|AEE87792.1| hypothetical protein FNFX1_1406 [Francisella cf. novicida Fx1] Length = 385 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|56708454|ref|YP_170350.1| hypothetical protein FTT_1406c [Francisella tularensis subsp. tularensis SCHU S4] gi|110670925|ref|YP_667482.1| hypothetical protein FTF1406c [Francisella tularensis subsp. tularensis FSC198] gi|224457605|ref|ZP_03666078.1| hypothetical protein FtultM_08179 [Francisella tularensis subsp. tularensis MA00-2987] gi|254371078|ref|ZP_04987080.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254875298|ref|ZP_05248008.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604946|emb|CAG46039.1| hypothetical membrane protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110321258|emb|CAL09422.1| hypothetical membrane protein [Francisella tularensis subsp. tularensis FSC198] gi|151569318|gb|EDN34972.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254841297|gb|EET19733.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159647|gb|ADA79038.1| hypothetical membrane protein [Francisella tularensis subsp. tularensis NE061598] Length = 385 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|16264038|ref|NP_436830.1| putative adenylate cyclase protein [Sinorhizobium meliloti 1021] gi|15140162|emb|CAC48690.1| putative adenylate cyclase protein [Sinorhizobium meliloti 1021] Length = 637 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 15/192 (7%) Query: 206 RAITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDN 258 A L++ + + RA L + A D+ +A ++++L N Sbjct: 395 AARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATTTDVETGLSEARQAVRLDPN 454 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLK 312 + L + A ++ ++NP+ P+ +A S + V + Sbjct: 455 LAAGFQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAE 514 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 RA RL + E + + G +D+A + AP++ LL+ + Sbjct: 515 RARRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPQEADCLLIRTAVLSQR 572 Query: 373 HNTDKILYWTQS 384 + + Sbjct: 573 GDVEGAQRTMAR 584 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 17/155 (10%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266 L + + A++ L A + D + A + + + Sbjct: 376 VLKARDRYKHGSKDAEALIAARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATT 435 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321 ++ R+A + P +A + L + + G ++ A R E+N Sbjct: 436 TDVETGLSEARQAVRL---------DPNLAAGFQVLSFGLSATGDYPGAMQAAQRAVELN 486 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +SL+ ++K + GS D+A A A ++ P Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ + A +A+ + P+ + + ++ A+ Q + A E N N Sbjct: 437 DVETGLSEARQAVRLDPNLAAGFQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEK 285 L+A + G + +A + +L + ++L + + +A+ +L + Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLRE 550 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD A + A +A++++P+ P A+ + V + A+ + ++ Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527 Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + D+ D + E L + L + A+ + Sbjct: 528 TYVYGQALYAAGRLDEADEVL-----RECLIRAPQEADCLLIRTAVLSQRGDVEGAQRTM 582 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ +V+P +A+ + ++ + RL E N V S + Sbjct: 583 ARLTEVDPEFSLASERSMRRFGDSALMEQFLSRLAEANAPDVTSGFL 629 >gi|46137453|ref|XP_390418.1| hypothetical protein FG10242.1 [Gibberella zeae PH-1] Length = 931 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 80/235 (34%), Gaps = 26/235 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E R G+L+ A+ +A + +P+ + + V+ + +A L ++ A Sbjct: 605 LAKEKWRAGELDGARLVLKRAFNQNPNNEDIWLSAVKLESESGNEEQARKLLEIAREQAP 664 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ R L G++ A+ +++L+L S + + K A Sbjct: 665 TDRVWMKSIVYERVL-----GNIEAALDLVLQALQLFPASPKLWMLKGQIYEDLGKIGPA 719 Query: 280 EVILEKIWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIA 335 K P + +Y+ L E+ + +K L+ + ++ ++ Sbjct: 720 REAYATGVKAVPKSVALWLLYSKLEEESGLT-VKARSVLDRARLAVPNNALLWRESVRLE 778 Query: 336 LEMGSIDQAHAKAMLAMKIAP----------------RKEIFLLLAQIEQANSHN 374 G++ QA A A + P + +L I+ + Sbjct: 779 RRAGNMAQAKAMMARAHREVPKSDVLWAEQVWHLEARTQRKARILEAIKTVDGSP 833 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 11/190 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 NI A + + F +++L+ QI + A E ++ + A+ Sbjct: 680 GNIEAA--LDLVLQALQLFPASPKLWMLKGQIYEDLGKIGPAREAYATGVKAVP-KSVAL 736 Query: 158 YSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + LY G A+ +A P+ + V+ A ++A + + + Sbjct: 737 WLLYSKLEEESGLTVKARSVLDRARLAVPNNALLWRESVRLERRAGNMAQAKAMMARAHR 796 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + +L A + + + + +E++K D S + + AA+ K Sbjct: 797 EVPKSD-----VLWAEQVWHLEARTQRKAR--ILEAIKTVDGSPIIFVVAARIFWGDRKL 849 Query: 277 RKAEVILEKI 286 +A+ EK Sbjct: 850 EQAQKWFEKA 859 >gi|302189081|ref|ZP_07265754.1| peptidase aspartic, active site [Pseudomonas syringae pv. syringae 642] Length = 654 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 24/228 (10%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL+ R GD + D ++ + ++ A + + +A L Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333 ++ P E+ Y + + + KR R + ++ S + S Sbjct: 303 QQARDAGELQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSN 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 A + + P +++F +D W Sbjct: 363 DAQAIAYFKRVLDYQQTGDLQMPAQQVF-------DTRRAVSDLSREW 403 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 25/216 (11%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L +L TG ++A + A + +F + L Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTA--VSEAREAVRSFPKQMAYRKL 219 Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 V +A+ QY A + AT + R+GD + A++ +A+ Sbjct: 220 LVSALIAQGQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234 + + P +A + Y + S A+ L Q + + A L +L Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGAL 333 Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264 + + D A +++ +++ + Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369 >gi|270160089|ref|ZP_06188745.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|289165132|ref|YP_003455270.1| TPR repeat protein [Legionella longbeachae NSW150] gi|269988428|gb|EEZ94683.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|288858305|emb|CBJ12173.1| TPR repeat protein [Legionella longbeachae NSW150] Length = 389 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 18/159 (11%), Positives = 61/159 (38%), Gaps = 6/159 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ++ P ++ +L + G + A+R + +++ Sbjct: 83 GEVDRAIRIHQNLIARPQLSLVQKKESLMALGQDYMSAGLFDRAERIFLEVVELGGSKET 142 Query: 190 VT-EAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + ++ Y K W +A+ + + + ++ A + + + + + Sbjct: 143 SSLHGLLAIYQQEKAWEKALDVIKKLEITTGTSFHHQAAHYYCEMAGQALKTNSLDKAAY 202 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +++ + S+ AS+ A + + + ++A L+K+ Sbjct: 203 CIKQAINVDAASVRASLMHASLEMKEGRYKQAIRSLKKV 241 >gi|162452186|ref|YP_001614553.1| protein kinase [Sorangium cellulosum 'So ce 56'] gi|161162768|emb|CAN94073.1| Protein kinase [Sorangium cellulosum 'So ce 56'] Length = 1765 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 65/208 (31%), Gaps = 7/208 (3%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 D+ L G +AA + A + + L L ++ A+ + Sbjct: 1152 RDRAEALLGLGEARLAAGDPDGAVAALNGAADLLPESPTPLALL--SRVFEAKGDWEEVV 1209 Query: 141 EKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 L + + +A+ Y ALD PD + ++Q Sbjct: 1210 RLKHRRLDVVTGEERSALLLEIGDLLAAHLHDRARAAKSYVA-ALDERPDDRKILTKLMQ 1268 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y K+WS+ + + + + + L A + GD+ + E L L Sbjct: 1269 LYSEEKDWSKLVDIVLKLAAKIDDSRQKAKYLHTAAIVSARQLGDLDRAATFYDEVLALD 1328 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILE 284 + A A + + + E +L+ Sbjct: 1329 PSLTRALAEAIELRGEKGDHEEVERLLK 1356 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 10/191 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD + A ALD P + A+ Y+ + + A+ + ++ E N Sbjct: 947 EEKGDRDGAIERYKMALDAQPQNAGASSALRAAYLARGDATSAVELI-AREAEVAEGNLA 1005 Query: 225 RAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV-- 281 + L +L ++ D + A ++ L + + + + +A Sbjct: 1006 KGRLYGEMALLLRERLKDDGRAAEAATRAVDLDPTGALGLMISGDLAFEAGRFLEAARHY 1065 Query: 282 -ILEKIWKVNPHPE---IANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +L V P + + Y L ++ + L + + +L +++ Sbjct: 1066 ELLASRVDVLPKEQGLKLLLRYVDALGKSGSSGKAIGTVKALLALAPDDPAALSRAARVN 1125 Query: 336 LEMGSIDQAHA 346 L+ G +A Sbjct: 1126 LDAGKAKEAAE 1136 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 92/310 (29%), Gaps = 37/310 (11%) Query: 81 YDKGYKALYTGLMSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 ++G K L + ++ + + A + L ++ L + A Sbjct: 1077 KEQGLKLLLRYVDALGKSGSSGKAIGTVKALLALAPDDPAALSR--AARVNLDAGKAKEA 1134 Query: 140 HEKLEMMLQI------PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 E ++ R A+ L GD + A A D+ P++P Sbjct: 1135 AELYGRLVDRFGAGLPERDRAEALLGLGEARLAAGDPDGAVAALNGAADLLPESPTPLAL 1194 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + +W + +++ + A+LL L A D + + +L Sbjct: 1195 LSRVFEAKGDWEEVVRLKHRRL-DVVTGEERSALLLEIGDLLAAHLHDRARAAKSYVAAL 1253 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + + + K I+ K +++ K K Sbjct: 1254 DERPDDRKILTKLMQLYSEEKDWSKLVDIVLK--------------LAAKIDDSRQKAKY 1299 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 + ++ ++ ++G +D+A + + P L A + Sbjct: 1300 LHT----------AAIVSAR---QLGDLDRAATFYDEVLALDPSLTRALAEAIELRGEKG 1346 Query: 374 NTDKILYWTQ 383 + +++ + Sbjct: 1347 DHEEVERLLK 1356 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 33/302 (10%), Positives = 76/302 (25%), Gaps = 48/302 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR-YAT-------------- 178 A + E L++ A+ L R G + + A Sbjct: 735 GDLGEATRRYEAALELDPASLTALRGLDRIHSRAGSYAALLQNLARQIDVSATPRQKINL 794 Query: 179 ---------KALDISPDAPWVTEAVVQQYVLA--------------KEWSRAITFLNQKK 215 + A EA++ + W ++ ++ Sbjct: 795 YERIAGIHDEEFLDHAKAAEALEAILGIDSAHEGSLAALGRHYRALERWEDVVSLYERQL 854 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + R +LL + G + L + + A A + Sbjct: 855 GIVPDDKRREELLLAMGRVLLDQIGSPERARKAYERVLAIDPHHAGALESLAHVRAATGD 914 Query: 276 KRKAEVILE----KIWKVNPHPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLV 329 A +E ++ LL E + G ++R + ++ + Sbjct: 915 AAAALSAIESLAATAKTAESKADLWIRAARLLEEKGDRDGAIERYKMALDAQPQNAGASS 974 Query: 330 IVSKIALEMGSIDQA----HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + L G A +A +A + ++ +A + + + + A Sbjct: 975 ALRAAYLARGDATSAVELIAREAEVAEGNLAKGRLYGEMALLLRERLKDDGRAAEAATRA 1034 Query: 386 LH 387 + Sbjct: 1035 VD 1036 Score = 36.8 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 11/189 (5%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QIP 150 L++ H+ A K + + + L L+ Q+ E+ ++ + + + +I Sbjct: 1234 LLAAHLHDRARAAKSYVAALDERPDDRKILTKLM--QLYSEEKDWSKLVDIVLKLAAKID 1291 Query: 151 ATREFAVYSLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 +R+ A Y L+ + ++GDL+ A + + L + P ++ + Sbjct: 1292 DSRQKAKY-LHTAAIVSARQLGDLDRAATFYDEVLALDPSLTRALAEAIELRGEKGDHEE 1350 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGD---MIASYHDAIESLKLCDNSIMAS 263 L + A E N +L L K M + + L +S + Sbjct: 1351 VERLLKVELDRATEENDTAKMLETFDRLGAVYKDKLGWMSEAIDAYEAAQTLDPDSEARN 1410 Query: 264 ICAAKSLIS 272 A S Sbjct: 1411 ELLANLYAS 1419 >gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414] gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414] Length = 608 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 80/286 (27%), Gaps = 48/286 (16%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTE 192 +Y A E LQ T VY L R+ GD A + ++L + P Sbjct: 298 GEYYQALEDYSQALQKNPT-LALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYC 356 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + ++ A+ + N N A R++ D A+ D ++ Sbjct: 357 DRATTRRIQGDYQGAVQDYTMALQI----NCNLAEAYYGRAIAYEFLQDFAAAVADNTQA 412 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------------- 299 +++ + A + +++A + +N P++ Y Sbjct: 413 IQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAIN--PDLVEAYYNRACLRYTLKDY 470 Query: 300 ----------THLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSI----- 341 ++ + L++ + + ++ + Sbjct: 471 QSAVADYTEALQRNPQSATFYSDRANARYALQDYHGAIADYHQALAIDSSRAEDWYNRGR 530 Query: 342 --------DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKI 378 A A A++ P ++L A I + I Sbjct: 531 SLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLEDYQGAI 576 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 79/278 (28%), Gaps = 62/278 (22%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---------RIGDLNSAQRYATKALD 182 + Y A T+ +Y Y E+ + D + A +AL+ Sbjct: 15 LQGDYQEAIANY--------TQAIQLYPDYAEAYYNLGIILSAELQDYHGAIANFDQALE 66 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI------- 230 I+P ++ AI +Q + + R A L + Sbjct: 67 INPQFAEAYCNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRGNAYLALEKYDQAI 126 Query: 231 ---------------------ARSLENA-----DKGDMIASYHDAIESLKLCDNSIMASI 264 A++L N + GD + D ++L+ A Sbjct: 127 ANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIADFQQALQWHPYFAPAYS 186 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEE 319 + ++A ++ +++ P +A +Y + G +K + Sbjct: 187 SRGNIYQILGEYQQAIAEHDRALQLD--PNLAEVYHNRGNARYALGDNQGAIKDYNYALK 244 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 I E+ + + QA A A+ + P Sbjct: 245 IKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPD 282 Score = 36.5 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 77/275 (28%), Gaps = 17/275 (6%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH-EKLEMMLQ 148 G+ + A Q H + I +Y A E + Sbjct: 154 RGVARCNYGDYQGAIADFQQALQWHPYFAPAYSS--RGNIYQILGEYQQAIAEHDRALQL 211 Query: 149 IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P E + GD A + AL I P Y K++ +A Sbjct: 212 DPNLAEVYHNRGNARYAL--GDNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQA 269 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I NQ + R L G+ + D ++L+ + A Sbjct: 270 IADFNQALILNPD----DVQAYSERGLIRETLGEYYQALEDYSQALQKNPTLALVYGLRA 325 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINK 322 + A + K++PH +A Y T + + G ++ +IN Sbjct: 326 NVRRLLGDYQGAIDDSNQSLKLHPH--LAQGYCDRATTRRIQGDYQGAVQDYTMALQINC 383 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E+ + + A A A+++ P Sbjct: 384 NLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPD 418 >gi|262305037|gb|ACY45111.1| acetylglucosaminyl-transferase [Skogsbergia lerneri] Length = 289 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + + P A Sbjct: 34 GQVGEAEECYNTALKLCPSHADSLNNL--ANIKREQGFIEDATKLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + + A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 44.2 bits (103), Expect = 0.055, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N K + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVGEAEECYNTALKLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFIEDATKLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 21/177 (11%), Positives = 53/177 (29%), Gaps = 14/177 (7%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E ++G+ AL + P + A + + E Sbjct: 30 LKEKGQVGEAEECYN---TALKLCPSHADSLNNLANIKREQGFIEDATKLYLKALEVFPE 86 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + A + +G + + E++++ A +L + A Sbjct: 87 F----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDIQGAL 142 Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N ++ ++ + ++ ++ Sbjct: 143 QCYSRAIQINPAFADAHSNLASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197 >gi|307316539|ref|ZP_07595982.1| adenylate/guanylate cyclase [Sinorhizobium meliloti AK83] gi|306897737|gb|EFN28480.1| adenylate/guanylate cyclase [Sinorhizobium meliloti AK83] Length = 637 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 15/192 (7%) Query: 206 RAITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDN 258 A L++ + + RA L + A D+ +A ++++L N Sbjct: 395 AARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATTTDVETGLSEARQAVRLDPN 454 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLK 312 + L + A ++ ++NP+ P+ +A S + V + Sbjct: 455 LAAGFQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAE 514 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 RA RL + E + + G +D+A + AP++ LL+ + Sbjct: 515 RARRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPQEADCLLIRTAVLSQR 572 Query: 373 HNTDKILYWTQS 384 + + Sbjct: 573 GDVEGAQRTMAR 584 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 17/155 (10%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266 L + + A++ L A + D + A + + + Sbjct: 376 VLKARDRYKHGSKDAEALIAARALLHRALELDPGYAAARANLGMTYIVDFVQNLSGRATT 435 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321 ++ R+A + P +A + L + + G ++ A R E+N Sbjct: 436 TDVETGLSEARQAVRL---------DPNLAAGFQVLSFGLSATGDYPGAMQAAQRAVELN 486 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +SL+ ++K + GS D+A A A ++ P Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 45/119 (37%), Gaps = 7/119 (5%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ + A +A+ + P+ + + ++ A+ Q + A E N N Sbjct: 437 DVETGLSEARQAVRLDPNLAAGFQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEK 285 L+A + G + +A + +L + ++L + + +A+ +L + Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLRE 550 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD A + A +A++++P+ P A+ + V + A+ + ++ Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527 Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + D+ D + E L + L + A+ + Sbjct: 528 TYVYGQALYAAGRLDEADEVL-----RECLIRAPQEADCLLIRTAVLSQRGDVEGAQRTM 582 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++ +V+P +A+ + ++ + RL E N V S + Sbjct: 583 ARLTEVDPEFSLASERSMRRFGDSALMEQFLSRLAEANAPDVTSGFL 629 >gi|218296681|ref|ZP_03497399.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23] gi|218242994|gb|EED09527.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23] Length = 357 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 9/204 (4%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + +G +A +A+ +P P + + + + A+ + Sbjct: 39 VQLYALGRYEAALSLFERAVKENPGNPDALYWLARAQLKMGLLNPALENAKGLVARNPRY 98 Query: 222 -----NRNRAILLIARSLENADKGDM--IASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + + R+ E+ +KG + ++ ++ Sbjct: 99 IGGYMVLSEAYVALYRASEDKEKGKAYLEQALSVLRDAERINPRYAPIFAQRGLVYALLG 158 Query: 275 KKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + KAE +K + PE+ A +L S L + + + ++ + V + Sbjct: 159 QMDKAEEAFKKALALEDTPEVRSALAEVYLASGKLDEALDQYAKAVALAPKNQDLRVRYA 218 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 L G + A K+ P Sbjct: 219 SALLLKGRPEAAAQVLEEGHKLKP 242 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 73/281 (25%), Gaps = 44/281 (15%) Query: 84 GYKALYTGLMSI-------AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 GY L +++ L + + + ++ + Q Sbjct: 101 GYMVLSEAYVALYRASEDKEKGKAYLEQALSVLRDAERINPRYAPIFAQRGLVYALLGQM 160 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A E + L + T E +L G L+ A KA+ ++P + Sbjct: 161 DKAEEAFKKALALEDTPEV-RSALAEVYLASGKLDEALDQYAKAVALAPKNQDLRVRYAS 219 Query: 197 QYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +L A L + K + + SL G + ++ L Sbjct: 220 ALLLKGRPEAAAQVLEEGHKLKPLDAEGWYTLGQAYLSL-----GRPKEAGVALENAVAL 274 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 A+ + +Y L + R Sbjct: 275 APLRFPAAYYY----------------------------LGQVYLAL--GDAAKAKSRLT 304 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + E ++ +G + A + A+K+ P Sbjct: 305 VAARLEPKKPEYRYLLCLANERLGDKEGARYQCQEALKLKP 345 >gi|321453432|gb|EFX64668.1| hypothetical protein DAPPUDRAFT_204585 [Daphnia pulex] Length = 1195 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 94/264 (35%), Gaps = 21/264 (7%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKA 180 L + I+ ++ Y A + L+ AT V + ++G+ + A+ +A Sbjct: 163 SLLGKACISFNKKDYKAALAYYKKALRTNATCPAGVRLGMGHCFLKLGNADKARLAFERA 222 Query: 181 LDISPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 LD+ P V A+++ + + +I Q A + + ++L + Sbjct: 223 LDLDPKCVGALVGMAILELNLQESD---SIRNGVQLLSRAYAVDSSNPMVLNHLANHFFF 279 Query: 239 KGDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVN----- 290 K D H A+ + +N M + A++ Q +A + + Sbjct: 280 KKDYSKVQHLALHAFHNTENEAMRAESCYQMARAFHVQGDYDQAFQYYYQATQFASTNFI 339 Query: 291 -PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK---IALEMGSIDQAHA 346 PH + +Y + +T + R+ + + E++ I+ + D A Sbjct: 340 LPHFGLGQMY--IYRGDTENAAQCFERVLKAQPGNYETMKILGSLYAASSSQSKRDIAKT 397 Query: 347 KAMLAMKIAP-RKEIFLLLAQIEQ 369 + P E ++ LAQI + Sbjct: 398 HLKKVTEQFPDDVEAWIELAQILE 421 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 56/165 (33%), Gaps = 5/165 (3%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + + Y+ A + Q +T + L GD +A + + L Sbjct: 310 MARAFHVQGDYDQAFQYYYQATQFASTNFILPHFGLGQMYIYRGDTENAAQCFERVLKAQ 369 Query: 185 PDAPWVTEAVVQQYVLAKEWSRA-ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P + + Y + S+ I + KK + + A + +A+ LE +D + Sbjct: 370 PGNYETMKILGSLYAASSSQSKRDIAKTHLKKVTEQFPDDVEAWIELAQILEQSDLQGSL 429 Query: 244 ASYHDAIESL--KLCDNSIMASI-CAAKSLISQNKKRKAEVILEK 285 ++Y A++ L K+ + + ++ E+ Sbjct: 430 SAYSTAMKILKEKVQADIPPEILNNVGALYYRLGNLEESRKYFEQ 474 >gi|262305015|gb|ACY45100.1| acetylglucosaminyl-transferase [Neogonodactylus oerstedii] Length = 289 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVADAEECYNTALQLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++ + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQAQTEEATKLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ Q H + L L I + Q A + + + P A Sbjct: 34 GQVADAEECYNTALQLCPTHADSLNNL--ANIKREQAQTEEATKLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASILQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 59/216 (27%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A E LQ+ T ++ +L A + KAL++ P+ Sbjct: 27 ANALKEKGQVADAEECYNTALQLCPTHADSLNNLANIKREQAQTEEATKLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASILQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYDARMKKLVAIVGDQLEKNRLPSVHPHH 236 >gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase [Acaryochloris marina MBIC11017] gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris marina MBIC11017] Length = 699 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 90/268 (33%), Gaps = 17/268 (6%) Query: 38 RTSPFVILSILYFFLFAWILLFAVSRFFLS--CPAMLFHMLHKRNYDKGYKALYTGLMSI 95 R S V+ S L+ + + V++ S P + +G+ L G Sbjct: 366 RMSRKVVGSALFTLTLLGGIGYVVAQGLQSAVSPKAITVA-EVNRQVQGH--LQQGDQKF 422 Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A + A + ++ Q+ + E + A +++ T Sbjct: 423 AQGDYQRALREYAAAIQKDPENAEA--HFNSGITKRRLNDLKGAIAHYTTAIRLKPTSVD 480 Query: 156 AV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A L +GD +A T+A+ ++P Y + AI +Q Sbjct: 481 AYNNRGLVR--SELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQ 538 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + ++ R + +D G+ A+ D + ++L N A + ++ Sbjct: 539 AVQIDAQYYE----AYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNL 594 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTH 301 +KA + +V+ P+ A YT+ Sbjct: 595 GNLKKAIADYTQAIRVD--PKYARAYTN 620 >gi|296102108|ref|YP_003612254.1| tetratricopeptide repeat protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056567|gb|ADF61305.1| tetratricopeptide repeat protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 389 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 37/189 (19%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + ++ T Sbjct: 83 GEVDRAIRIHQTLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFSQLV--DETDF- 139 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 RIG + ++Q Y +W +AI + Sbjct: 140 ----------RIG---------------------ALQQLLQIYQATSDWQKAIDTAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K K+ R A +L+ DM + + NS SI + ++ Sbjct: 169 KLGKDKQRVEIAHFYCELALQQMGNDDMDKAMALLKKGAAADRNSARISIMMGRVFMASG 228 Query: 275 KKRKAEVIL 283 KA L Sbjct: 229 DYAKAVESL 237 >gi|197286918|ref|YP_002152790.1| cellulose biosynthesis protein C [Proteus mirabilis HI4320] gi|194684405|emb|CAR46089.1| putative cellulose biosynthesis protein C [Proteus mirabilis HI4320] Length = 1228 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 87/283 (30%), Gaps = 44/283 (15%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL A + L + + A+ L + + R GDL + Q+ L+ + + Sbjct: 272 ALNTGNLKQATTYFKQALTVDSQDAQALAGLGYVALRSGDLATGQKL----LNQASQSGG 327 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 +Q + + + ++ K ++L+ +S Sbjct: 328 EQGQKWKQQAEDAGFYSQLREVQRQAKQGN----------TQQALDKL-SPLTYSSGEKG 376 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306 + + + A L Q A +L ++++ + E A Y + Sbjct: 377 LSAH----------LLQADLLRKQGNLPAAYQLLSELYQQHSQNEKVISAYYYLLIQQGK 426 Query: 307 TVGKLKRALRLEEINKESVESLVIV-----------SKIALEMGSIDQAHAKAMLAMKIA 355 A +L S+ + ++ ALE G QA A + Sbjct: 427 NSQ----AEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQARQLLTQAQRKN 482 Query: 356 PRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397 P+ ++L LA++ A T Q D +I+ Sbjct: 483 PQNNWVYLDLARLMIAEGDKTQADQLILQLERRQTRDANYIAA 525 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 78/218 (35%), Gaps = 25/218 (11%) Query: 86 KALY-TGLMSIAAHNIPLARKMHSYVS----------QQHTFHNEYLVYLLEVQIALAER 134 +AL G +++ + ++ +K+ + S +Q + L EVQ + Sbjct: 297 QALAGLGYVALRSGDLATGQKLLNQASQSGGEQGQKWKQQAEDAGFYSQLREVQRQAKQG 356 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFES---CRIGDLNSAQRYATKALDISPDAP 188 A +KL P T L ++ + G+L +A + ++ Sbjct: 357 NTQQALDKLS-----PLTYSSGEKGLSAHLLQADLLRKQGNLPAAYQLLSELYQQHSQNE 411 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGDMIAS 245 V A + + S+A + ++ + N + + L + + + G + Sbjct: 412 KVISAYYYLLIQQGKNSQAEQLVAKQPASLRQKLTANTDPSERLRRDAQKALENGHRTQA 471 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 ++ + + + A+ +I++ K +A+ ++ Sbjct: 472 RQLLTQAQRKNPQNNWVYLDLARLMIAEGDKTQADQLI 509 >gi|288935896|ref|YP_003439955.1| hypothetical protein Kvar_3037 [Klebsiella variicola At-22] gi|288890605|gb|ADC58923.1| TPR repeat-containing protein [Klebsiella variicola At-22] Length = 389 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 37/192 (19%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + + ++ R Sbjct: 83 GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLS 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + ++Q Y +W AI + Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE +R A +L+ D+ + + NS SI + + + Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLKKGAAADRNSARVSIMMGRVWMEKG 228 Query: 275 KKRKAEVILEKI 286 KA LE++ Sbjct: 229 DYAKAVESLERV 240 >gi|206579869|ref|YP_002238984.1| tetratricopeptide repeat protein [Klebsiella pneumoniae 342] gi|290512960|ref|ZP_06552324.1| yciM [Klebsiella sp. 1_1_55] gi|206568927|gb|ACI10703.1| tetratricopeptide repeat protein [Klebsiella pneumoniae 342] gi|289774573|gb|EFD82577.1| yciM [Klebsiella sp. 1_1_55] Length = 389 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 37/192 (19%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + + ++ R Sbjct: 83 GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLS 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + ++Q Y +W AI + Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE +R A +L+ D+ + + NS SI + + + Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLKKGAAADRNSARVSIMMGRVWMEKG 228 Query: 275 KKRKAEVILEKI 286 KA LE++ Sbjct: 229 DYAKAVESLERV 240 >gi|148981566|ref|ZP_01816453.1| hypothetical protein VSWAT3_04666 [Vibrionales bacterium SWAT-3] gi|145960809|gb|EDK26143.1| hypothetical protein VSWAT3_04666 [Vibrionales bacterium SWAT-3] Length = 284 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 85/233 (36%), Gaps = 23/233 (9%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFLNQ 213 A+ L + G L+ A++ + L PD + +V Y +EW++AI + N Sbjct: 1 LALQQLAKDYMVSGFLDRAEKIFEQ-LVDEPDHKEGALQQLVAIYQQTREWNKAIHYGNI 59 Query: 214 KKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K K+ + RA + +++ G+ + ++L + ASI K Sbjct: 60 LVKLGKKKMKMRATVAHFWCELAMQEQADGNRSKALAHFKKALSEDPKCVRASIALGKFH 119 Query: 271 ISQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INK 322 ++ +K LE + + P ++ Y L E + L+ K Sbjct: 120 LANEDYQKTIDCLEAVLEQDIDFISEVLPTLSECYHKLGHE-----AQLVEFLKACIQKK 174 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQA 370 V + ++++++ I A + P + L LA+ E+ Sbjct: 175 AGVSAELMLAQLVAHHEDIGSAQELLTKQLVKNPTMKGFYRLIDYHLAEAEEG 227 >gi|83749848|ref|ZP_00946817.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum UW551] gi|207744708|ref|YP_002261100.1| tpr domain protein [Ralstonia solanacearum IPO1609] gi|83723485|gb|EAP70694.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum UW551] gi|206596115|emb|CAQ63042.1| tpr domain protein [Ralstonia solanacearum IPO1609] Length = 700 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 65/230 (28%), Gaps = 43/230 (18%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 RI + A A +A+ ++P + A+ + A+ Q + + Sbjct: 262 RRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQTDEALPHFEQAARLPGAVAED 321 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ R++ + G A+ ++L+ S+ A++ + + KA Sbjct: 322 ---ALVGRAILLMEAGRRDAALAAFDQALEQFPGSV-----QARAGRADARTFKAGD--- 370 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P+IA + L + R + K L++ QA Sbjct: 371 --------PDIAALEACLADGERRSQRDRISA-----------HFALGKAYLDLQDPAQA 411 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393 + + + W A P+P Sbjct: 412 FHHLDAGNRQKRSTFTY------------DGAASSRWMARIADAFPPEPH 449 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 3/150 (2%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + A E + A + + +G + A +++L + A + A Sbjct: 165 LERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLA 224 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKES 324 ++ I +++ A +L+++ P HP A E L A + + S Sbjct: 225 EAEIGRHRHEAALRVLDRLSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALAPHS 284 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 E+ ++ +G D+A A ++ Sbjct: 285 AETHHALAMALQALGQTDEALPHFEQAARL 314 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 4/150 (2%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A L++ A +L F G + A A A+++SP + + Sbjct: 166 ERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAE 225 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A+ L++ + L AR+ + A +++ L Sbjct: 226 AEIGRHRHEAALRVLDR----LSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALA 281 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI 286 +S A +L + + +A E+ Sbjct: 282 PHSAETHHALAMALQALGQTDEALPHFEQA 311 >gi|295690833|ref|YP_003594526.1| cellulose synthase operon C domain-containing protein [Caulobacter segnis ATCC 21756] gi|295432736|gb|ADG11908.1| cellulose synthase operon C domain protein [Caulobacter segnis ATCC 21756] Length = 1274 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 49/246 (19%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-------K 215 E+ DL A+R +AL + + + ++ A T L + + Sbjct: 184 EALERKDLAGAERLFNQALRERSNDLDAAGGLGIIRLQQGRFADAETLLKRASGGASGEQ 243 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQN 274 + + + ++R+ + G + DA + + I A + +SL + Sbjct: 244 RWGEALRSAQFFSTLSRARAAYEGGRFAQAEQDARPLANGQNPDRIEAQVLWGQSLAALG 303 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + A E ++ +A + E++ +++ Sbjct: 304 RPTDA----ETAFRAA----LATA-----------------------PQRPEAVAGLAQA 332 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA------NSHNTDKILYWTQSALHA 388 + D+A A P A IE+A +T +AL A Sbjct: 333 LADQARYDEASEIAANL--TGPTAGQTR--AAIERARANELQKRGDTFGSGAALSAALTA 388 Query: 389 MPDPLW 394 P+ W Sbjct: 389 NPNNPW 394 Score = 36.5 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 2/94 (2%) Query: 124 LLEVQIAL-AERQYN-IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL L A + + +L I A+ + R GD + A +A+ Sbjct: 615 LLSALARLYDTGDLAPQAAQTYDALLSINPNDYEALAGSARVAVRTGDYDRANDLLRRAI 674 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 I P+ + + Q A+ + + Sbjct: 675 AIQPNNADLYYQLGQMEQARGRERAALKAFERAQ 708 >gi|282165368|ref|YP_003357753.1| protein kinase [Methanocella paludicola SANAE] gi|282157682|dbj|BAI62770.1| protein kinase [Methanocella paludicola SANAE] Length = 624 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 26/225 (11%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G +++A +AL + P + + + AI + E+ Sbjct: 400 ARGQVDAAIGEYREALRLDPGLADAHNNLGTALMAKGQSDGAIQEYREALATRPEY---- 455 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ L A +G++ + + E+L+L + A I +L +A K Sbjct: 456 AMAHHNLGLSYACRGELGDAMGEYREALRLKPAFVEARINLGLALAISGCFDRAIEEYRK 515 Query: 286 IWKVNP-----HPEIANIY-THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 ++P H +A+ + V + + A I+ + + + EMG Sbjct: 516 AAVLSPDDAVLHFNLASALRATGRIGDAVDEYRIA---TGIDPMNARAHYQLGLSLDEMG 572 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 + A ++ M A+++ P K + Sbjct: 573 DLQGAISEYMSALRLNP-------------GEPGAAGKFRNALER 604 >gi|213982999|ref|NP_001135660.1| interferon-induced protein with tetratricopeptide repeats 5 [Xenopus (Silurana) tropicalis] gi|197245770|gb|AAI68560.1| Unknown (protein for MGC:184922) [Xenopus (Silurana) tropicalis] Length = 473 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 35/201 (17%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR---------AITFLNQKKKNAKE 220 A+ +A+ +PD P + +E+ + L + K Sbjct: 153 YERAKGCFEEAVKGNPDDPEWNTGLATVVCRLEEFRGRNCPAFKSVSFQLLERAVKLNP- 211 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +++ + +L+ + + ++L+L + AK K + Sbjct: 212 ---KDSVIKVLLALKLQELKRQEEAMKHIKDALELTPDLPYVLRYVAKFYRRAGKFEETI 268 Query: 281 VILEKIWKVNP-----HPEIANIY------------THLLSENTVGKLKRALRLEEINKE 323 +L+K + P H ++ Y + ++T L E Sbjct: 269 RVLKKAVSITPNSGFLHHQLGLCYRQMIIQRKRTGKANYRGQDTQE----IKDLTEKAIF 324 Query: 324 SVESLVIVSKIALEMGSIDQA 344 E + + K L D A Sbjct: 325 HFEMALEMKKTFLHAH-FDLA 344 >gi|54295320|ref|YP_127735.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens] gi|53755152|emb|CAH16645.1| hypothetical protein lpl2405 [Legionella pneumophila str. Lens] Length = 577 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 74/235 (31%), Gaps = 41/235 (17%) Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180 L Q E A E + Q P T L + ++GD+ +A Y +A Sbjct: 8 LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 I+P+ + + Y A + AI + Q + E+ + L +L N Sbjct: 66 RKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + H + ++ + A+ L+ +N++ A Sbjct: 122 NYQKALHHYVIAVNTEPDF-SAAHFNLGLLLLKNQQLSAAK------------------- 161 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + +N + E+ + + LE + +A ++ Sbjct: 162 -----------TQFNNVIALNPQHREAQFYLGILHLEDNLLSEAEQAFQKVLEQD 205 >gi|320580866|gb|EFW95088.1| hypothetical protein HPODL_3460 [Pichia angusta DL-1] Length = 595 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 4/198 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL++ + A + + + +Y Q+ + A + E Sbjct: 351 GLVNADKGDFASADEEIGKAIK--MNPEDPDIYYHYGQLFYLMGDLDKAKDNFEKSKLYN 408 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 F L + R G+ + +A P +P V + ++++ A Sbjct: 409 PENVFGHIQLACIAYRKGESATCDELFREAKRKFPTSPEVPNYYGEILFDRQDYAAAAKQ 468 Query: 211 LN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + + A+ LI +S D+ + +L S +A I + Sbjct: 469 FDTAARLQEVLPTFNIGALPLINKSAIFQVNKDIAGCEQLLKTACELDPKSEVARINLGQ 528 Query: 269 SLISQNKKRKAEVILEKI 286 + K + A + E+ Sbjct: 529 IYLQAQKVKDAIELFEEA 546 >gi|295673180|ref|XP_002797136.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb01] gi|226282508|gb|EEH38074.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb01] Length = 938 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 91/260 (35%), Gaps = 37/260 (14%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R +A + +P+ + A V+ AK+ A L+ ++ A Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADAKQTEHARELLSTARREAG 675 Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250 + R L N ++ + Sbjct: 676 TDRVWIKSVAFERQLGNTDQALDLVNQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 + C S+ + A++ KA IL++ P+ A ++T + E Sbjct: 736 TGTRACPKSVPIWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 793 Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A L +E S ++ S+ LE + + + K+ +F+ +A+ Sbjct: 794 NISQAKVLMAKALQEVPNSGLLWSESIWNLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 852 Query: 367 IEQANSHNTDKILYWTQSAL 386 I DK + W + A+ Sbjct: 853 IFWGERK-LDKAMTWFEKAI 871 >gi|194873813|ref|XP_001973282.1| GG16015 [Drosophila erecta] gi|190655065|gb|EDV52308.1| GG16015 [Drosophila erecta] Length = 931 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDEALR 686 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + LK C SI I +A + Sbjct: 687 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTQGLKKCPTSIPLWILSANLEERK 746 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 KA ILE+ N P++A ++ + LK Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|124007529|ref|ZP_01692234.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] gi|123987012|gb|EAY26768.1| tetratricopeptide repeat family [Microscilla marina ATCC 23134] Length = 1434 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 48/275 (17%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE--------FAVYSLYFESCRIGDLNSAQRYAT 178 ++ L ++ A + ML+ T +Y+L + +G A++Y T Sbjct: 111 ARLYLQTKKMAKAEKIYAQMLESQKTALGEKSPEYALTLYNLANLNRDLGKPAEAKKYYT 170 Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQ------KKKNAKEWNRN 224 +AL I PD E + Y ++ +A+ + Sbjct: 171 QALAIQKASRGEQHPDYLNTLEGLAFLYNQEGDYKKAMPLFEKIWQTYKATVKNSNPQYI 230 Query: 225 RAILLIAR---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK--A 279 RA+ +A ++ +K D + Y++ ++ LK + + A+ +++ + + R A Sbjct: 231 RAVGNLAEIYFAVGKYNKADPL--YNETVQLLKATKSPLYGRYLASMAVLKEVQDRYDEA 288 Query: 280 EVILEKIWKV------NPHPEIANIY------THLLSE--NTVGKLKRALRLEEIN---- 321 E + ++ HP+ A L +E +K+A + Sbjct: 289 EKLYQEAITELKKDVGEQHPDYAQAMHDFGKLYELKNELNKAEQMMKKAQTIRAQAYGKN 348 Query: 322 -KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ESL ++K+ +MG QA A A A++I Sbjct: 349 SPKYAESLNDLAKLYFKMGKHQQALAHAKQALEIR 383 >gi|224369177|ref|YP_002603341.1| tetratricopeptide (TPR) domain protein [Desulfobacterium autotrophicum HRM2] gi|223691894|gb|ACN15177.1| tetratricopeptide (TPR) domain protein [Desulfobacterium autotrophicum HRM2] Length = 760 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 70/247 (28%), Gaps = 44/247 (17%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPAT--REFAVYSLYFESCRIG 168 N Y +LL I +A++ A ++ P+ R + L E Sbjct: 433 ALPNHYPAHLLLGNIHMAQKHEPEAETIFTKLITLAPDNPSAYYRMGVLRKLQKEKIE-- 490 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A +Y L+I+P ++ YV ++ + AI K + +++I+ Sbjct: 491 ----ALQYFNTILEINPGRMDAFGQIISIYVTDQQDAIAIKTCLSHLK-KLDAAIHKSIV 545 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + +++K I + A +Q K Sbjct: 546 HTILGQLYQSNNKTDLAEEAYKKAIKENPAYIPSYTALAAMYKAQGKIN----------- 594 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +++ L N S ++ ++ D A Sbjct: 595 --------------------DSIEQYEALIGENPGHASSHNLLGQLYEGRQQYDLAENHY 634 Query: 349 MLAMKIA 355 A++I Sbjct: 635 KKALEIN 641 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 80/262 (30%), Gaps = 9/262 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 ++ A M + ++ + YL+ + ++ A + ++ A Sbjct: 215 DLESAEGMLKIIRDKN--PEDPEAYLMLGKFYSGRKENRKAEQAFLSAIEKDPENLNAHL 272 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L IG + A+++ KAL I P+ A + + +A +++ K+ Sbjct: 273 MLARFYTHIGKNSQAEKFIRKALLIDPENFEAKMAYSEFLFAHNKNEQAEKIIDEVLKDR 332 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ L + K + + L +S + ++ K + Sbjct: 333 PKF----LTALTVKGKILISKKEFKPAIEIFQSLLNEEPDSSDINFLLGTAMFETGKIER 388 Query: 279 AEVILEKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A L K + P H + + ++ + +++ I Sbjct: 389 ALPYLSKALERKPSFHQARFLRAQIYFRDMDFFSAKTETEKIINALPNHYPAHLLLGNIH 448 Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357 + +A + +AP Sbjct: 449 MAQKHEPEAETIFTKLITLAPD 470 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 90/272 (33%), Gaps = 16/272 (5%) Query: 125 LEVQIALAERQYNIAHEK---LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L +Q + RQ E +L I + + A+ L ++AQ+ A+ Sbjct: 134 LYLQAGILARQNKGIEHTKLLYEKILDIDSRQIPALLVLSKIYIAEKKWDAAQKALKTAI 193 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 D PD + +++ YV + A L K K A L++ + + Sbjct: 194 DFDPDNMALQKSLYLLYVDKNDLESAEGML--KIIRDKNPEDPEAYLMLGKFYSGRKEN- 250 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---- 297 + + +++ ++ A + A+ K +AE + K ++P A Sbjct: 251 -RKAEQAFLSAIEKDPENLNAHLMLARFYTHIGKNSQAEKFIRKALLIDPENFEAKMAYS 309 Query: 298 --IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ H +E K + + + + +L + KI + A + Sbjct: 310 EFLFAHNKNEQAE---KIIDEVLKDRPKFLTALTVKGKILISKKEFKPAIEIFQSLLNEE 366 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 P L + ++ L + AL Sbjct: 367 PDSSDINFLLGTAMFETGKIERALPYLSKALE 398 >gi|154495172|ref|ZP_02034177.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC 43184] gi|154085722|gb|EDN84767.1| hypothetical protein PARMER_04221 [Parabacteroides merdae ATCC 43184] Length = 667 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 50/149 (33%), Gaps = 12/149 (8%) Query: 213 QKKKNAKEWNR--NRAILLIARSLENA---DKGDMIASYHDAIESLKLCDNSIMASICAA 267 +K + R + + N D A+ ++LKL + A + Sbjct: 512 KKLREEIHAQREIQKEYAHEYYLMGNECITKAHDPNAAIRSFDKALKLYPEFVDAWVRKG 571 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINK 322 +L+ +A L + ++NP A Y L + + ++ ++ Sbjct: 572 VTLLDMGDGFQAVTCLNEAVRLNPKSFKARYNRGKSYLQLKYYDEA--VSDFMKAVDLKP 629 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + +++ L +G + A +A Sbjct: 630 KHAAAHEYLAEAFLHIGEEELARQHQDIA 658 >gi|312381341|gb|EFR27109.1| hypothetical protein AND_06385 [Anopheles darlingi] Length = 833 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 107 GQVKEAEECYNIALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 163 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 164 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 223 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 224 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 273 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+D+ P+ P + + A N + N A L + Sbjct: 83 RRAIDLQPNFPDAYCNLANALKEKGQVKEAEECYNIALRLCP----NHADSLNNLANIKR 138 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 139 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 196 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 197 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 256 Query: 353 KIAPR 357 K+ P Sbjct: 257 KLKPD 261 >gi|302785157|ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii] gi|300157948|gb|EFJ24572.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii] Length = 1041 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 5/126 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + ++ Y+ A +Q P Y L ++ DL SA K LD+ Sbjct: 310 ARSYHSKGDYDKAAAYYRASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDV 369 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ + V ++ +A+ + K + A + I L + D + Sbjct: 370 HPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSP--RDVDAWIEIGELLVSTDFSAAL 427 Query: 244 ASYHDA 249 ++ A Sbjct: 428 DAFKTA 433 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 13/221 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDISPDAPWV 190 Q + A + + +LQ+ A+ +L D S Q +A +I P Sbjct: 209 GQLSKARQAFQRVLQLDPENLDALVALGIMDINANDAESVQEGTKKMLEAFEIYPYCATA 268 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++ + + ++++ +ARS + D A+Y+ A Sbjct: 269 LNHLANHYFYTEQHGVVEQLMETALASTDNALIKSQSYFNLARSYHSKGDYDKAAAYYRA 328 Query: 250 -IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLL 303 ++ LK + I+ + + N + A EK+ V HPE Y HL Sbjct: 329 SVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDV--HPENCETLKVVGYIHLQ 386 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 L+ + +++ V++ + + ++ L A Sbjct: 387 QGRNDKALESFRKAAKVSPRDVDAWIEIGEL-LVSTDFSAA 426 >gi|227879098|ref|ZP_03996987.1| tetratricopeptide repeat family protein [Lactobacillus crispatus JV-V01] gi|256850261|ref|ZP_05555690.1| TPR repeat-containing protein [Lactobacillus crispatus MV-1A-US] gi|262046347|ref|ZP_06019309.1| TPR repeat-containing protein [Lactobacillus crispatus MV-3A-US] gi|293379770|ref|ZP_06625902.1| tetratricopeptide repeat protein [Lactobacillus crispatus 214-1] gi|227861339|gb|EEJ68969.1| tetratricopeptide repeat family protein [Lactobacillus crispatus JV-V01] gi|256712898|gb|EEU27890.1| TPR repeat-containing protein [Lactobacillus crispatus MV-1A-US] gi|260573218|gb|EEX29776.1| TPR repeat-containing protein [Lactobacillus crispatus MV-3A-US] gi|290923679|gb|EFE00550.1| tetratricopeptide repeat protein [Lactobacillus crispatus 214-1] Length = 415 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 89/230 (38%), Gaps = 21/230 (9%) Query: 146 MLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + +P + + SL ++ G + +A+ +AL ++P+ + + + L+ Sbjct: 89 LYNVPESSSAYLDSLLVQADYYQTNGLIETAKDKLIRALQLAPEEDAIKFGLAEIEYLSG 148 Query: 203 EWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + +A+ L +++ E N + + L N ++ + A L + Sbjct: 149 NYEQALELYQDLIKRQSTFSEVNLYQRLFATFAKLGNYEEAAKVI-REHANSILDIDSK- 206 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314 A L+S ++A L+++ + +P +P +A Y H + L+ A Sbjct: 207 ----YEAGLVLLSVGDDKQAIKFLDEVIEQSPDYVNAYPLLAQAYDH--QHDNEQVLRTA 260 Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 N E E+L + ++ A + +D A +K+AP + Sbjct: 261 QAGLAYN-ELDETLYSMGARAAANLNELDTARDLLEKGLKVAPDNSDLRM 309 >gi|307153280|ref|YP_003888664.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7822] gi|306983508|gb|ADN15389.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822] Length = 1048 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 92/297 (30%), Gaps = 47/297 (15%) Query: 91 GLMSIAAHNIPLARKMHSY----VSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLE 144 G + A K + F E L L I Y A + E Sbjct: 375 GQAHFNLGDYAAAIKYQKNRLELARKIEDFSQQIEALNGL--GDIYYQLDDYEQAVKFYE 432 Query: 145 MMLQIPATR------EFAVYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPW-VTE 192 L I + + +L + + D + A YA ++LD++ P W Sbjct: 433 QGLAISKNQEKYEKVLETLNNLGNVARQKNDYDKAIDYAQQSLDLARKIVNPYEEWKALI 492 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-----DKGDMIASYH 247 ++ Y + +AI +L Q K++ L + A + I Y Sbjct: 493 SLGGTYKYLGD-KKAIEYLQQSLAITKKFPTRGQEFLTLEYMGLAYRALGENEKAIEVYQ 551 Query: 248 DAI---ESLKLCDNSIMASICAAKSLISQNKKRKAEV-------ILEKIWKVNPHPEIAN 297 A+ ++ + ++AE ILE IWKV +I Sbjct: 552 KALVQARAINDRPAKGTILSHLGSAYFESGNLQEAEKILRESINILESIWKVLKKEDIYK 611 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 I ++T +L+ L NK + ALE+ +A A A + Sbjct: 612 ISLFERQKDTYLELQ--QVLIAENKPNE---------ALEISERGRARAYAERLAER 657 >gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310819976|ref|YP_003952334.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 1369 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 102/284 (35%), Gaps = 21/284 (7%) Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 L K + KG +A+ L LA + +++ + L L + A E + Sbjct: 815 LRKGDAAKGLQAVEQAL-----DEKALAGLGPAEIARARSLKGVALAGLFRFKEAETELK 869 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 + + + P + L D A +A E + Sbjct: 870 DS--------LKKDPDSIFIKAQ-LAMVLRANRDFAGALPLYEEASKEEAGVIEYAEGYI 920 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 V+ + S A+ + NA+ N R LL R ++ D ++++ + ++K Sbjct: 921 TSLVMLGKMSDALKAVEAA--NARFTNDARIALLFGRIDDSRD--QLVSAEGHYLRAIKE 976 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRA 314 A++ + + + A V LE+ K P+ L +L Sbjct: 977 DPKLFEANLYLGRFYLRLRRTGDARVQLEEAAKKAPNDAGVRAGMGELALAENNVRLAEE 1036 Query: 315 LRL--EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L E+N ++ + +S++AL G ++ A AK+ A+++ P Sbjct: 1037 EFLRAAELNPSLADAQLGLSRVALLTGDLETARAKSTRALELDP 1080 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 95/269 (35%), Gaps = 17/269 (6%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 ALAE +A E+ ++ + A L + GDL +A+ +T+AL++ P Sbjct: 1025 ALAENNVRLAEEEFLRAAELNPSLADAQLGLSRVALLTGDLETARAKSTRALELDPFL-- 1082 Query: 190 VTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + +Q+ + AI L + K+ L +KG++ + Sbjct: 1083 LKDGRLQRGTVLWRLGQLDEAIVELEKAKEEDPRSVNIPITL----GAVLYEKGELAGAE 1138 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTH 301 + + +L ++ A A + + A ++ + PH + IY Sbjct: 1139 KNLMLALNREPSNHEALYYVAMVKAKRAEYTGAIDQMKSAVEKAPHRADYHYALGVIYRD 1198 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEI 360 E + + + ++ + K LE +D+A A+ P RK + Sbjct: 1199 A--ERLPEAIAEWKETIKRDPNHADTYEQLGKAYLETNKMDEAIPAFESALAADPKRKRV 1256 Query: 361 FLLLAQIEQANSHNTDKILYWTQSALHAM 389 + + + + I + ++ A Sbjct: 1257 LGAIGDVFFSEGRWDEAIRRYEKALKEAP 1285 >gi|110805283|ref|YP_688803.1| tetratricopeptide repeat-containing protein [Shigella flexneri 5 str. 8401] gi|110614831|gb|ABF03498.1| putative heat shock protein [Shigella flexneri 5 str. 8401] Length = 371 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 65 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 120 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 121 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 148 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 149 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 208 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 209 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 259 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 260 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 304 >gi|320354473|ref|YP_004195812.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122975|gb|ADW18521.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus propionicus DSM 2032] Length = 581 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 102/283 (36%), Gaps = 21/283 (7%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A M Y ++ + LL ++ L Q A LE +L A + Sbjct: 138 AEAMRQYQLISDRHPDDPAILLLLAEMYLNANQPERARPLLERILAQDPAAYLAHVLMAR 197 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 A + TKAL+ + + + + + YV A + A+ + ++ Sbjct: 198 LCQLQALPEEAIEHYTKALERN-WSSELQMELGELYVKAGQHDEAVRLYRDIIERDEQNE 256 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R L+ L+ D + ++S + +I A+ Q K KA I Sbjct: 257 GARVALIHVYLLQKKDDQALEELNR--LKSYAEQPQRVDLTI--ARLYAKQKKYDKAVAI 312 Query: 283 LEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +EKI H E +A ++ + E L++ +++ E +++L + +I Sbjct: 313 VEKIL----HKENLSEARYFLAVLF--VQQEKYGRALRQVRQIDREAPEYLDALFLQVRI 366 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANSHNT 375 E + +A + A E+++LLA + Q + Sbjct: 367 LREQNKLAEAKQLLEEHIAAADTRNAEMYILLAALYQDLGRDD 409 >gi|331092952|ref|ZP_04588186.2| TPR domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022580|gb|EGI02637.1| TPR domain-containing protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 548 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 82/232 (35%), Gaps = 12/232 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L D Sbjct: 66 QIAEYMGADQSALETALVWAKNAPTSLEAQRAAAIQLARAGRYDDSLAYMERVLQGQGDT 125 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + A+ + + + ++ K N ++ L+ ++L GD S Sbjct: 126 HFDFLALSAAETDSDTRNGLLKSFDRLL--GKYPNNSQ--LIFGKALLLQQNGDAEQSLK 181 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + + + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 182 L-LEDNPPKEGEVAPILLRARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 238 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 E + L + + E ++ + LE + D+A ++ Sbjct: 239 EQNRMEDAKVQFSSLLKQYPDDDELRFSLALVCLEAKAWDEAAGYLEELIER 290 >gi|327404890|ref|YP_004345728.1| hypothetical protein Fluta_2911 [Fluviicola taffensis DSM 16823] gi|327320398|gb|AEA44890.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola taffensis DSM 16823] Length = 364 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 20/178 (11%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAV--YSL---YFE--SCRIGDLNSAQRYATKALDI 183 ++ YN A + +++ + A E I D + AL Sbjct: 162 FLQQDYNAAIKYFTKSIELDPSSPMAYNDRGSCYRMQENYPKAIEDYEA-------ALRK 214 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P+ +V V K++S A+ N+ + N + R + +KG + Sbjct: 215 NPNLAFVLNNVGTTKKKMKDYSGALIAFNRAIS----VDVNFFLAYNNRGVALLEKGSLD 270 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + D +++++ A+ A + +KAE + K ++ P A+ Y + Sbjct: 271 DAIKDFEKAMQINPKYAPAASNLAGIYFKRKDFKKAEELASKAIAID--PNYASAYVN 326 >gi|322707980|gb|EFY99557.1| DnaJ and TPR domain protein [Metarhizium anisopliae ARSEF 23] Length = 520 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 94/306 (30%), Gaps = 39/306 (12%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A+ L++ A + V+Q L Q LA + + A + Sbjct: 9 AVTASLLASA----------TNLVAQDIPVDLPVSTLLTSAQSHLARGETSEALAYYDAA 58 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + + ++ +G N A + L++ P + + +W Sbjct: 59 IAKDPSNYITLFKRATTYLSLGRSNQASEDFGRVLELKPGFEGAHIQLAKIKAKVADWEG 118 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + K++ + ++ +A + AD + + E + +A + A Sbjct: 119 ARSEYMAAKRSDESTE----LVELAEAQGAADLAEAAERDKNWEECISHA---GVAILVA 171 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 +++ + ++ + + E +G L L+L + + Sbjct: 172 SRAPSLRERRSRCR------------------FQRGEIEEGMGDLHHVLQL---RPGNTD 210 Query: 327 SLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +++ + + D A A+A + P +I L + E+ K+ Sbjct: 211 PHILISATTVYALADFDNAIAQAKKCLHSDPDSKICQTLHRQERRLQKAFQKVESQLNRG 270 Query: 386 LHAMPD 391 + Sbjct: 271 QTTLAG 276 Score = 36.8 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 47/138 (34%), Gaps = 21/138 (15%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + ++ + A +Y +A+++ P++ W + + +E+ AI L + + Sbjct: 320 MLCQAYSESNHKDASKYCEEAIELDPESFWGLIYKGKSLLKREEYDAAIQTLEKAAEIRP 379 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + ++ ++ ++ + Y + + I A+ RKA Sbjct: 380 D-KSDKVHPILQKAQIALKRSKTKDYYKILGVANDADERQIKAAY------------RKA 426 Query: 280 EVILEKIWKVNPHPEIAN 297 HP+ A Sbjct: 427 SK--------QYHPDKAE 436 >gi|296200947|ref|XP_002747829.1| PREDICTED: pre-mRNA-splicing factor prp1-like [Callithrix jacchus] Length = 1022 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 100/301 (33%), Gaps = 43/301 (14%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 660 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 717 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A A Sbjct: 718 ANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIKAAQD 777 Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + + M + + LK C +S + ++ Sbjct: 778 LCEEALRHYEDFPKLWMMKGQIEEQKELMEKAREAYNQGLKKCPHSTALWLLLSRLEEKI 837 Query: 274 NKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIV 331 + +A ILEK NP +P + L + + A L +E S ++ Sbjct: 838 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILW 895 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 S+ A+ + + Q K++ A+K + L +A++ + K W + Sbjct: 896 SE-AIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERK-ITKAREWFHRTVKIDS 953 Query: 391 D 391 D Sbjct: 954 D 954 >gi|261401625|ref|ZP_05987750.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970] gi|313667745|ref|YP_004048029.1| periplasmic hypothetical protein [Neisseria lactamica ST-640] gi|269208261|gb|EEZ74716.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970] gi|309378649|emb|CBX22720.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|313005207|emb|CBN86640.1| putative periplasmic hypothetical protein [Neisseria lactamica 020-06] Length = 389 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 107/349 (30%), Gaps = 53/349 (15%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELARNYQSAGLVDRAEQIF---LGLQDGEMAHEARQHLLHIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAK 268 + + + A + + K + A+ A+E+ K C A++ Sbjct: 169 RLLSHDEQTYQFEIAQFYCELAQASLFKSNFDAARFHIGKALEANKKC---TRANMILGD 225 Query: 269 SLISQNKKRKAE---VILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRALRL 317 A +E+ + ++ Y E + +L + L Sbjct: 226 LEYRLGNFPAAVDAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLDRLTGYMQTFPEL 285 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LAQIEQANS 372 + I +SL++ + +A A+ ++ P ++ L L+ + A Sbjct: 286 DLIQVVYEKSLLLKGE--------KEAAQTAVELVRRRPDLNGVYRLLGLKLSDLNPAWK 337 Query: 373 HNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + D + L ++ + + S W P F Sbjct: 338 ADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQAFFWH--CPACNKWQTF 382 >gi|291278873|ref|YP_003495708.1| hypothetical protein DEFDS_0458 [Deferribacter desulfuricans SSM1] gi|290753575|dbj|BAI79952.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 530 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 84/224 (37%), Gaps = 33/224 (14%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 N A K+ + + N+ + L + + + ++Y+ A + L+ Sbjct: 41 TGNYDKALKL---IDDLLNYDNDPYLVLKKGEYLIRLKRYDEARDLYLKFLEKED--YPG 95 Query: 157 VYSLYFESC----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + LY + D +SA +Y +K + I ++ E +++ Y L ++++AI L+ Sbjct: 96 I--LYNLANIYKTYYKDYDSAIKYLSKLIKIEKREGYLLE-LMKLYELKGDYAKAIGVLD 152 Query: 213 Q--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKS 269 + + + R L + LE D ++ K + ++ A Sbjct: 153 ELIGLNPSSAYYYQRGTLYLKLGLE-------KKGLKDLEQAYKN--DKYPLALYKLADY 203 Query: 270 LISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSEN 306 + + K KA L + VN HPE + +Y L + Sbjct: 204 YLKKGDKEKAVKYLSSV--VNKHPEQASLKFQLGRLYMDLKEYD 245 >gi|147806293|emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera] Length = 799 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 11/191 (5%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCDNSIM 261 A + A+ A LL + +G ++++ E+ LC Sbjct: 280 EAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGMVMSACEHYREAAILCPTHFR 339 Query: 262 ASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 A +L + R A LE K + H ++A+ H + E + + Sbjct: 340 ALKLLGSALFGVGEYRAAVKALEEAIFMKADYADAHCDLASA-LHAMGEGEKA-IPVFQK 397 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 ++ V++L + + ++MG +A + + P L + + + Sbjct: 398 AIDLKPGHVDALYNLGGLYMDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAE 457 Query: 377 KILYWTQSALH 387 + + AL Sbjct: 458 EAKKALKEALK 468 >gi|46201785|ref|ZP_00054372.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 720 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 81/269 (30%), Gaps = 47/269 (17%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + R+ + A L + A A++ L + G L A + AL + P+ Sbjct: 70 ALFSVRRLDEAEAAYRRALALNAEIPEALFGLGNTLAQTGQLEEALAFHRNALALRPNFV 129 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-----EWNRNRAILLIARSLE-------- 235 + A+ L + + RA+L E Sbjct: 130 EALANMAGVLGRLGRRDEAVEKLRRAVAERPGEASLHADLGRALLASGHGAEADVEVCRA 189 Query: 236 -----------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 +G M + A +++L N A + A+ L ++ + Sbjct: 190 LRLAPDSPPVLVAASDVIRARGRMEEALEYADRAVELAPNYPPAVLVLARQLRVLGRRDQ 249 Query: 279 AEVI------LEKIWKVNPHPEIANIYTHLLSENTVGKL----KRALRLEEINKESVESL 328 A +E +A+++ + N + +L RL + E Sbjct: 250 AAETYLRLAGIEGA-------GVAHLFDAANALNEMSRLPEAVALYQRLLAREHDHSEVW 302 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E+G +++A A +++P Sbjct: 303 NNLGNALRELGELERAAECYEAAERLSPD 331 >gi|237808311|ref|YP_002892751.1| Tetratricopeptide domain-containing protein [Tolumonas auensis DSM 9187] gi|237500572|gb|ACQ93165.1| Tetratricopeptide domain protein [Tolumonas auensis DSM 9187] Length = 385 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 106/340 (31%), Gaps = 63/340 (18%) Query: 98 HNIPLARKMHSY--VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + L L + +A + A L +L Sbjct: 83 GEVDRAIRIHQNLVARCLDSTEQQNLSMLELARDFVAAGLLDRAENVLISLLNDDE---- 138 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A A + ++Q Y EW +AI ++ Sbjct: 139 --------------------LADDARKM----------LLQIYEQLNEWQKAIDIADK-- 166 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 ++K+ +R A + +A + D + +LK + A + A+ I Q + Sbjct: 167 LSSKKHHRVVAHYYCQLAENDASQSDFKTAASRLKRALKSDPQCVRAQMLLAQLYIKQQQ 226 Query: 276 KRKAEVILEKIWKVNPHPEIANIYT-HLLS-----ENTVGKLKRALRLEEI--NKESVES 327 +A +++I PE+++ + ++ + A L + ++ Sbjct: 227 YDQAIKHIDQI------PELSSAFASEAWKLLQQCKSHLDDRSFAAILVRWLESTQNTTV 280 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILYWTQSAL 386 + +++ + A A + +K P + F L+ +A + +L Sbjct: 281 ALALAESIQAQQGVRDAEAFILRHIKRNPTMKGFHRLMTYQLEAMHDDKAAESISLLRSL 340 Query: 387 H----AMPDPLWISDDGYLSSV---WLPLSPISKTLCYFE 419 A+ P++ + SS W P K Sbjct: 341 VEKQMAVK-PIYRCEHCGFSSKVIFWH--CPSCKQWGSIS 377 Score = 38.0 bits (87), Expect = 4.1, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 17/199 (8%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + A L + D A+ + E RAI + + Sbjct: 48 SEQPDKAVDLFIDLLQVDTDTIDTHLALGNLFRQRGEVDRAIRIHQNLVARCLDSTEQQN 107 Query: 227 ILLIARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + ++ + + G + + + +L D+ A + N+ +KA I Sbjct: 108 LSMLELARDFVAAGLLDRAENVLISLLNDDELADD---ARKMLLQIYEQLNEWQKAIDIA 164 Query: 284 EKIWKVNPHPEIANIYTHLLSENT--------VGKLKRALRLEEINKESVESLVIVSKIA 335 +K+ H +A+ Y L + +LKRAL+ + + V + ++++++ Sbjct: 165 DKLSSKKHHRVVAHYYCQLAENDASQSDFKTAASRLKRALK---SDPQCVRAQMLLAQLY 221 Query: 336 LEMGSIDQAHAKAMLAMKI 354 ++ DQA ++ Sbjct: 222 IKQQQYDQAIKHIDQIPEL 240 >gi|83645522|ref|YP_433957.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396] gi|83633565|gb|ABC29532.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396] Length = 884 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 93/311 (29%), Gaps = 26/311 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYL---------LEVQIALAERQ-------YNIAHE 141 + A + +E + L L + ++A Sbjct: 109 GELNEAHVGLAKSLLLLGKVDEAMTELNKIEEPNATLSARADNVRGDIELSKRNTDVART 168 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 LQ A+ L S D + A KA +++P+ V + L Sbjct: 169 LYNKALQSDPKSFQALLGLSKASFLQNDKDGAAAELKKAEELAPNDSDVWLWKAKMAALE 228 Query: 202 KEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 K + A + ++ +++ + + +G ++ K Sbjct: 229 KNFPAAEDAYVRALEDIGQYDLMTLQKYQTISELIEVLRAQGKHAEAFTYQEVLDKSGPG 288 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRL 317 SI S +A + KAE L+ I + P H E A + ++ L Sbjct: 289 SIKNSYVSALEAVKNKDYAKAEEYLKGILEKAPGHRE-AGVLLGMVKYQQGDWEAADKYL 347 Query: 318 EEINKESVESLVIVSKIA--LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT 375 + E V S V + A L++ + A K P +A++E N + Sbjct: 348 SQFATEDVNSAVTKALAATKLKLQQPEAAARLVEKLPKEDPDSLSIYGVAELESGNLASG 407 Query: 376 DKILYWTQSAL 386 + + AL Sbjct: 408 VEA---LEKAL 415 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 44/272 (16%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L+ +L Q ++ A E++ + Y E+ + D A+ Y Sbjct: 261 ELIEVLRAQ-----GKHAEAFTYQEVLDKSGPGSIKNSYVSALEAVKNKDYAKAEEYLKG 315 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI--------- 230 L+ +P + +W A +L+Q +A+ Sbjct: 316 ILEKAPGHREAGVLLGMVKYQQGDWEAADKYLSQFATEDVNSAVTKALAATKLKLQQPEA 375 Query: 231 -ARSLENADKGDMIAS------------YHDAIESLK--LCDNSIMASIC--AAKSLISQ 273 AR +E K D + +E+L+ L +S A + K+ ++ Sbjct: 376 AARLVEKLPKEDPDSLSIYGVAELESGNLASGVEALEKALALDSSNAVLVDKLGKAYLAN 435 Query: 274 NKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + KA +L NP E + + Y + +E+ K S Sbjct: 436 GQADKAITLLSDSKDKNPKSEGIRALLVSAYAKAGKGDQAK-----TEIEDWKKAIPNSA 490 Query: 329 VIV-SKIAL--EMGSIDQAHAKAMLAMKIAPR 357 + ++ A + D+A A KI+P Sbjct: 491 LAFNAEGAYYSSLDQFDKAEKAFEQAKKISPD 522 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 105/319 (32%), Gaps = 51/319 (15%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G++ + A K S + + N + L ++ A ++ + P Sbjct: 331 GMVKYQQGDWEAADKYLSQFATEDV--NSAVTKALAATKLKLQQPEAAARLVEKLPKEDP 388 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + ++Y + G+L S KAL + + + + + Y+ + +AIT Sbjct: 389 DS--LSIYGVAE--LESGNLASGVEALEKALALDSSNAVLVDKLGKAYLANGQADKAITL 444 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L+ K + RA+L+ A + G + + + K NS +A Sbjct: 445 LSDSKDKNPKSEGIRALLVSAYAK----AGKGDQAKTEIEDWKKAIPNSALAFNAEGAYY 500 Query: 271 ISQNKKRKAEVILEKIWKVNP---HP------------------------------EIAN 297 S ++ KAE E+ K++P P ++A Sbjct: 501 SSLDQFDKAEKAFEQAKKISPDLKTPYRNSILLFAKTQSWNKLLDETKSAVKQFPEDLAL 560 Query: 298 IYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 I + N + KL A + + + +++ G D+A A Sbjct: 561 IRALFEAANKLDKLGEATSYLEEIANNVTTTAAPSLTLAEFYARTGEFDKARQFLNKAKG 620 Query: 354 IAPR----KEIFLLLAQIE 368 + + LL+A +E Sbjct: 621 LDSAGSQLESTTLLVATLE 639 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 3/134 (2%) Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + +L+ + ++ L A Y + + + + + Y E+ +A FLN Sbjct: 557 DLALIRALFEAANKLDKLGEATSYLEEIANNVTTTAAPSLTLAEFYARTGEFDKARQFLN 616 Query: 213 QKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + K + ++ + A E K + I A + K+ Sbjct: 617 KAKGLDSAGSQLESTTLLVATLEIPSLIKAQKNEDARKLATEVAKTLPDRIEARLLPVKT 676 Query: 270 LISQNKKRKAEVIL 283 + + +L Sbjct: 677 EFLTDNEAAGVKLL 690 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 1/98 (1%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 N L A + A E+ E + QI A+ +L + GD A Sbjct: 765 PNSPQTITLLAMGYQANNMPDKAIEQYERLRQIRPNDAVALNNLSWLYFEKGD-ARALEL 823 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A A + P++ + + + A+ L + Sbjct: 824 AENAYKLQPESAAIADTYGWIVYKNGDAKSALPILKKA 861 >gi|332975534|gb|EGK12424.1| hypothetical protein HMPREF9374_1491 [Desmospora sp. 8437] Length = 482 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 137 NIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 AH L+ P + Y Y +S + D + A+ + KAL++ P+ + + Sbjct: 90 EEAHAAFRRALELDPNLSIAHLWYGYYCQSVKE-DWDRAEVHLRKALELEPENEYYMTTL 148 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + ++ A T + + A R + + + E+L+ Sbjct: 149 AEFEEAQGNFTEAETLFRRALEIAPTEARVFRV----YAEYLHRNHRYDEARPLLREALR 204 Query: 255 LCDN 258 L + Sbjct: 205 LEPD 208 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 59/156 (37%), Gaps = 6/156 (3%) Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + E L++ + + + + ++ +A + +++P+ IA+++ Sbjct: 54 QYAKALELIREFLRVNPDHAWSVAFEGRVFVMLDQVEEAHAAFRRALELDPNLSIAHLWY 113 Query: 301 HLLSENTVGKLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ RA + E+ E+ + +++ G+ +A A++IAP Sbjct: 114 GYYCQSVKEDWDRAEVHLRKALELEPENEYYMTTLAEFEEAQGNFTEAETLFRRALEIAP 173 Query: 357 R-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F + A+ N + + AL PD Sbjct: 174 TEARVFRVYAEYLHRNHRYDE-ARPLLREALRLEPD 208 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ A L L++ E+ + +L G+ A+ +AL+I+P V Sbjct: 123 DWDRAEVHLRKALELEPENEYYMTTLAEFEEAQGNFTEAETLFRRALEIAPTEARVFRVY 182 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + A L + + + R + SL+ +D+ Sbjct: 183 AEYLHRNHRYDEARPLLREALRLEPDNESIRGLYFSNYSLQESDQA 228 >gi|330951014|gb|EGH51274.1| peptidase aspartic, active site protein [Pseudomonas syringae Cit 7] Length = 654 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 95/315 (30%), Gaps = 41/315 (13%) Query: 75 MLHKRNYDKGYKALYTGLMSIAA----HNIPLARKMHSYVSQ---QHTFHNEYLVY---L 124 K GY L + A + ARK + + E L L Sbjct: 89 RFPKARPKPGYLEGNQALRAYANRDYDGSASHARKAIAQAPKNLDYRMMLIEALQRQQRL 148 Query: 125 LEVQIALAERQYN--------IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 E Q A+ E + + ++ + + + GD ++A Sbjct: 149 DEAQAAINEAEQALGPQQVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDNDTAVSE 202 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +A+ P + +V + +++ A + + N N A LL+ R Sbjct: 203 AREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMR 258 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHP 293 GD + D ++ + ++ A + + +A L++ P Sbjct: 259 QRLGDQDGARQDFAQA--MAGGNLPLRE-QASLYAAMGQPSEALQRLQQARDAGELQPGD 315 Query: 294 EIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHA 346 E+ Y + + + KR R + ++ S + S A + + Sbjct: 316 EVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSDDAQAIAYFKRVLD 375 Query: 347 KAMLAMKIAPRKEIF 361 P +++F Sbjct: 376 YQQTGDLQMPAQQVF 390 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 63/216 (29%), Gaps = 25/216 (11%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L +L TG ++A + A + Y L+ Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKAATGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221 Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 IA QY A + AT + R+GD + A++ +A+ Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234 + P +A + Y + S A+ L Q + + A L +L Sbjct: 277 -GGNLPLREQASL--YAAMGQPSEALQRLQQARDAGELQPGDEVQIAYFLSQAGDDQGAL 333 Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264 + + D A +++ D++ + Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSDDAQAIAY 369 >gi|315038201|ref|YP_004031769.1| O-linked transferase [Lactobacillus amylovorus GRL 1112] gi|325956654|ref|YP_004292066.1| O-linked transferase [Lactobacillus acidophilus 30SC] gi|312276334|gb|ADQ58974.1| putative O-linked transferase [Lactobacillus amylovorus GRL 1112] gi|325333219|gb|ADZ07127.1| O-linked transferase [Lactobacillus acidophilus 30SC] gi|327183478|gb|AEA31925.1| O-linked transferase [Lactobacillus amylovorus GRL 1118] Length = 415 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 101/263 (38%), Gaps = 30/263 (11%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172 F E L + +I L + + L + + + SL ++ G + + Sbjct: 62 FPKEDLFKVYLAEILLNDGDEDDGLSLLYSVSHDSS---AYLDSLLVQADYYQTSGLIET 118 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229 A+ +AL I+P+ V + + L+ ++ +A+ L Q+++ E N N+ + Sbjct: 119 AKDKLLQALKIAPEEDAVKFGLAELDYLSGDYEQALALYKDLVQRQETFGEVNLNQRLFA 178 Query: 230 IARSLENADKGDMI-ASYHDAIESL--KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + N ++ I D+I + K +M S+ KA L+++ Sbjct: 179 TNAKMGNYEQAAEIIRKRSDSIFDIDSKYEAGLVMLSV---------GDDDKAIKFLDEV 229 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGS 340 + +P +P +A Y H + L+ A N E E+L + ++ A + Sbjct: 230 IEQSPDYVNAYPLLAQAYEH--KHDNEQVLRTAQAGLAYN-ELDETLYSLGARAAANLNE 286 Query: 341 IDQAHAKAMLAMKIAPRKEIFLL 363 +D A +KIAP + Sbjct: 287 MDTARDLLEKGLKIAPDNSDLRM 309 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 76/226 (33%), Gaps = 30/226 (13%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + I A+ + E V ++ Y A + ++Q T Sbjct: 113 SGLIETAK--DKLLQALKIAPEEDAVKFGLAELDYLSGDYEQALALYKDLVQRQET---- 166 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAP----------WVTEAVVQQYVLAKEWSR 206 + + R+ N+ +A +I ++ + + Sbjct: 167 -FGEVNLNQRLFATNAKMGNYEQAAEIIRKRSDSIFDIDSKYEAGLVMLSV----GDDDK 221 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 AI FL++ + + ++ +L A D ++ + + +L + Sbjct: 222 AIKFLDEVIEQSPDYVNAYPLLAQAYE-HKHDNEQVLRTAQAGLAYNELDETLYS---LG 277 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENT 307 A++ + N+ A +LEK K+ P +++N+Y H+ +++ Sbjct: 278 ARAAANLNEMDTARDLLEKGLKIAPDNSDLRMQLSNLYLHMHQDSS 323 >gi|255611944|ref|XP_002539362.1| conserved hypothetical protein [Ricinus communis] gi|223506840|gb|EEF23021.1| conserved hypothetical protein [Ricinus communis] Length = 327 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 78/214 (36%), Gaps = 18/214 (8%) Query: 160 LYFESCRIGDLNSAQRYATKAL----------------DISPDAPWVTEAVVQQYVLAKE 203 + + + D A+R A AL ++PD+ + + V A + Sbjct: 71 MMALAQQTRDPRLARRAAEMALTAKQTAEAVSAIRLWRSLAPDSDEAMQFFLGFAVTADD 130 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 S A + K AK R +++ D A++ L D+++ A Sbjct: 131 LSEAEAVFEARLKKAKPA--ARPLMMFQMQQYLLRAKDKAAAFSLMERVLLPYDDTLEAH 188 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 + +++ N +A + + P E+A + T +S + +K + + Sbjct: 189 LILSQAAAGNNDPERARAEAARALAIKPDSELAILSTAQVSGDIDAAIKVLTGFLDKYPK 248 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + E ++I ++ D+A + ++ +K P Sbjct: 249 ANEVRAAYARILVDNKQYDEARKQFLMLLKDQPD 282 >gi|18859261|ref|NP_571705.1| protein-kinase, interferon-inducible double stranded RNA dependent inhibitor [Danio rerio] gi|11545427|gb|AAG37839.1|AF295376_1 interferon-inducible double stranded RNA dependent protein-kinase inhibitor [Danio rerio] Length = 502 Score = 47.2 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 61/179 (34%), Gaps = 19/179 (10%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A + + A++ + E + + R+ G ++ D ++++L + Sbjct: 54 AAGQLAEALSHYHSAV----EGDSKSYLTYYKRATVFLAMGKSKSALPDLTQAIQLKPDF 109 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI-YTHLLSENTVGKLKR 313 + A + L+ Q ++A + + +P H ++ L E +R Sbjct: 110 LAARLQRGNILLKQGSTQEAREDFQAVLNHSPDHKEAHDQLLKADKLESLQEEVHEAHRR 169 Query: 314 ---------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + E++ ES + ++ +++G +A A ++ L Sbjct: 170 GDCRIAVQVLEHVIELSPWDPESRELRAECYIQLGEPRKAIMDLTPASRLRADNRAAFL 228 >gi|330002534|ref|ZP_08304358.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3] gi|328537296|gb|EGF63553.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3] Length = 389 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 37/192 (19%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + + ++ R Sbjct: 83 GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLG 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + ++Q Y +W AI + Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE +R A +L+ D+ + + S SI + + + Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLRKGAAADRTSARVSIMMGRVWMEKG 228 Query: 275 KKRKAEVILEKI 286 KA LE++ Sbjct: 229 DYAKAVESLERV 240 >gi|172038545|ref|YP_001805046.1| putative prenyltransferase [Cyanothece sp. ATCC 51142] gi|171699999|gb|ACB52980.1| putative prenyltransferase [Cyanothece sp. ATCC 51142] Length = 383 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 83/264 (31%), Gaps = 42/264 (15%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLE--MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 E L LL + + + Y A E L R F+ + + + G+ +A Sbjct: 59 KEQLDELLRRGRDYVDKGDYQRAIATYEQAASLDKDNARIFS--GIAYLHSQQGNYQAAV 116 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 +Y +AL + A+ + + A + + ++ ++ I + Sbjct: 117 KYYQQALSLDSSNANFYYALGDSLANIGDNNNAASAYYYAIQLNPQFVKS----YIGLGV 172 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + + + L N+ A SL+ Q + +A L Sbjct: 173 VLLRQENYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYL----------- 221 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 N V + V+ ++++ L+ G ++ + A +I Sbjct: 222 ----------GNAVERF----------SGDVDLRLLLATAYLQQGQLELGKEQLQRAERI 261 Query: 355 APRKEIFLL-LAQI-EQANSHNTD 376 P L +A+I E + + Sbjct: 262 DPSNTKIQLKIARIYEVQENLDEA 285 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 79/274 (28%), Gaps = 23/274 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALAERQYNIAHEKLEMML 147 + N A K + + + L L A N A + Sbjct: 103 AYLHSQQGNYQAAVKYYQQALSLDSSNANFYYALGDSL----ANIGDNNNAASAYYYAIQ 158 Query: 148 QIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 P + + L R + A + + + P+ P + + K+ + Sbjct: 159 LNP--QFVKSYIGLGVVLLRQENYEGAAEAYKRVIALDPNNPEAFAIMGSSLLQQKQLDQ 216 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ +L + R +L A +G + + ++ ++ + Sbjct: 217 ALQYLGNAVERFSGDVDLRLLLATAY----LQQGQLELGKEQLQRAERIDPSNTKIQLKI 272 Query: 267 AKSLISQNKKRKAEVILEK-IWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEI 320 A+ Q +A I + + PE Y L ++ +G + L EI Sbjct: 273 ARIYEVQENLDEALKIYRRISYLNRKSPE---AYAGVGRIQLAQKDYLGAIITYKDLIEI 329 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E + E +A A K+ Sbjct: 330 IPQNPEPYYYLGVAFKERQRNSEAKKALQYAKKL 363 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 64/195 (32%), Gaps = 11/195 (5%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 YV ++ RAI Q K+ R + + ++ +G+ A+ ++L L Sbjct: 72 YVDKGDYQRAIATYEQAASLDKDNAR----IFSGIAYLHSQQGNYQAAVKYYQQALSLDS 127 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLK 312 ++ SL + A ++N P+ Y L EN G + Sbjct: 128 SNANFYYALGDSLANIGDNNNAASAYYYAIQLN--PQFVKSYIGLGVVLLRQENYEGAAE 185 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 R+ ++ + E+ I+ L+ +DQA A++ LL Sbjct: 186 AYKRVIALDPNNPEAFAIMGSSLLQQKQLDQALQYLGNAVERFSGDVDLRLLLATAYLQQ 245 Query: 373 HNTDKILYWTQSALH 387 + Q A Sbjct: 246 GQLELGKEQLQRAER 260 >gi|183221520|ref|YP_001839516.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat (TPR) domains [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 700 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 15/242 (6%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y+ A ++++ A Y+L + A +Y KALD + + P V + Sbjct: 301 DYDRAEYYFREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYI 360 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++ + + AIT L + + L A + KG+++ + ++ Sbjct: 361 ADAFLSMGQTNMAITALKKALLLKP----SDVDSLFALAELYYKKGELVEAESLFRRIIR 416 Query: 255 LCDNSI---MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 L A + L + ++ E +NP + + Y H Sbjct: 417 LTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHA--GK 474 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LA 365 ++ + + ++ V S + ++ LE ++A ++ A+ P L LA Sbjct: 475 PTMAIESLRKSQALDPNHVPSRLAIADYYLENRFYNEAISEYEEAIAWKPELYEARLKLA 534 Query: 366 QI 367 + Sbjct: 535 DV 536 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 55/306 (17%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A AR+ N+Y V LL+ + A E + + + Sbjct: 194 AGKFEEARRAAQRAK--EIAPNDYRVALLQGNLFQEIGDPQSAIEAYKEGQSLAPSDVTL 251 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ------YVLAKEWSRA--- 207 Y+L + G+L A K + +P+ AV+ + +++ RA Sbjct: 252 TYNLAISYLKQGNLAEAISEFQKVVQTAPN---SQTAVLSYGHLGTIFYQREDYDRAEYY 308 Query: 208 -ITFLNQKKKNAKEWNR-----------NRAILLIARSLEN---------------ADKG 240 + K +AK + A ++L+ G Sbjct: 309 FREVIRLKTGDAKAYYNLGLVYLKKKVPEEAAKYFQKALDANANEPEVYRYIADAFLSMG 368 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + ++L L + + + A+ + + +AE + +I ++ P + Y+ Sbjct: 369 QTNMAITALKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTP----GDTYS 424 Query: 301 HL----------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 E + +N ++ + + L G A Sbjct: 425 ETAYVNLGIILDEMERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRK 484 Query: 351 AMKIAP 356 + + P Sbjct: 485 SQALDP 490 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 71/226 (31%), Gaps = 12/226 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A + + L A + +G N A KAL + P A+ + Sbjct: 337 EEAAKYFQKALDANANEPEVYRYIADAFLSMGQTNMAITALKKALLLKPSDVDSLFALAE 396 Query: 197 QYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 Y E A + + + ++ + L E + IA++ A+ Sbjct: 397 LYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILDEMERYSESIAAFEGALS--- 453 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H-P---EIANIYTHLLSENTVG 309 L + A S + K A L K ++P H P IA+ Y N Sbjct: 454 LNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDPNHVPSRLAIADYYLENRFYNEA- 512 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + E E+ + ++ + ++ + A + ++ A Sbjct: 513 -ISEYEEAIAWKPELYEARLKLADVYIQTKNYQAAEKMLVYVLENA 557 >gi|71748398|ref|XP_823254.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70832922|gb|EAN78426.1| hypothetical protein, conserved [Trypanosoma brucei] gi|261333167|emb|CBH16162.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 557 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 85/263 (32%), Gaps = 13/263 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDIS 184 + A ++ + QI R + + D + + ++ Sbjct: 271 AMAYFHDGDVENAVKEFARLRQIAPWRLADPLLVHYSTALWQRKDTGALGSLSQTLINEM 330 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P +P Y L KE A+ L++ + E+ A R E Sbjct: 331 PVSPVTLCVAANAYSLLKESKEALCMLDRAVQLDSEF----AYAHTLRGYELLHLDRKHD 386 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-- 302 +Y ++ + N A + +A+ ++ ++NP P I N Y Sbjct: 387 AYESFQNAVLIDSNHYNAYAGLGELYFRSENIPQAQYYFKQAIQINPLPSIMNRYAATYH 446 Query: 303 LSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + L ALR+ + + ++ + +++ + + +A + K P + Sbjct: 447 RRDTSKENLSEALRIYDSAIKRHPTNLGARHQRAEVLIRLRRYPEAREALLEMTKACPDE 506 Query: 359 EI-FLLLAQIEQANSHNTDKILY 380 + ++ LA+ + Y Sbjct: 507 AMLYVTLAKCVHFMGMPGKAVQY 529 >gi|298713360|emb|CBJ33577.1| conserved unknown protein [Ectocarpus siliculosus] Length = 700 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 52/134 (38%), Gaps = 7/134 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+A + ++ + ++L ++ A + + + K +AE + + Sbjct: 36 LVAAAAGLFERRKFDEAESVLRQALSESPSNPPALVLLGRVRATTGKLDEAERLYRVALE 95 Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +P H +A ++ + + R E + ++ E+ + + ++++ G+ + Sbjct: 96 ASPRNAPAHHALAKVFA--FQQRWAEAKESFERSLEADADNAEAWLGLGRVSMATGNEEA 153 Query: 344 AHAKAMLAMKIAPR 357 A ++ + P Sbjct: 154 AERHYARSLSLDPS 167 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 78/235 (33%), Gaps = 7/235 (2%) Query: 125 LEVQIALAERQY--NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L A + + A L L + A+ L G L+ A+R AL+ Sbjct: 36 LVAAAAGLFERRKFDEAESVLRQALSESPSNPPALVLLGRVRATTGKLDEAERLYRVALE 95 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 SP A+ + + + W+ A + + + A + + G+ Sbjct: 96 ASPRNAPAHHALAKVFAFQQRWAEAKESFERSLEADAD----NAEAWLGLGRVSMATGNE 151 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 A+ SL L ++ + + + A+ + ++NP ++ + Sbjct: 152 EAAERHYARSLSLDPSNALLHFDMGVLSCKRGQVIAADEAFARAGELNPKLDLTVVAQMF 211 Query: 303 LSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + + RL + + + ++ + + A A+++ P Sbjct: 212 TAYDMLEQARDTYKRLLQKDPNDAVHQLAYGELCEALNDEEGARDAYDEALRVDP 266 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 8/155 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++++A A L + + + + SC+ G + +A +A +++P Sbjct: 142 GRVSMATGNEEAAERHYARSLSLDPSNALLHFDMGVLSCKRGQVIAADEAFARAGELNPK 201 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIAS 245 A Q + +A + +K+ + A + +L D + Sbjct: 202 LDLTVVA--QMFTAYDMLEQARDTYKRLLQKDPNDAVHQLAYGELCEAL-----NDEEGA 254 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 E+L++ A A L +A Sbjct: 255 RDAYDEALRVDPGMGKAHFRKALLLTGTGVTNQAA 289 >gi|260768937|ref|ZP_05877871.1| hypothetical protein VFA_001994 [Vibrio furnissii CIP 102972] gi|260616967|gb|EEX42152.1| hypothetical protein VFA_001994 [Vibrio furnissii CIP 102972] Length = 389 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 99/339 (29%), Gaps = 59/339 (17%) Query: 98 HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + + L + + + A E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIEQKNLALQQLAKDYMVSGFLDRAERIFEQLVDEPEHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + + Y +EW +AI + Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIDCAHALV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K ++ + A +++ G + ++L+ + ASI K + Sbjct: 169 KMGRKRMKASIAHFWCELAMQEKADGHDNKAIQLFKKALQEDPKCVRASISLGKLYLESE 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +K +E + + P +A Y HL E + + R + + S E Sbjct: 229 DYKKTIQYMEMVLDQDIDFIGEVLPTLAECYHHLGQEQELVQFLR-QCISDKAGVSAE-- 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS-- 384 ++++++ + + A + P + F L I +A L Q Sbjct: 286 LMLAQLVAQHEGVASAQELLTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQKLV 345 Query: 385 --ALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 L A P + S+ W P K Sbjct: 346 GEQLKAK--PHYRCRRCGFSTHSLYWH--CPSCKGWGSI 380 >gi|254445221|ref|ZP_05058697.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198259529|gb|EDY83837.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 501 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 81/243 (33%), Gaps = 19/243 (7%) Query: 134 RQYNIAHEKLEMMLQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 Y A L+ M + P R + F G + A + K +++ D Sbjct: 187 GDYKRALSYLDRMQEIDPENARFYRYRGTVF--MEEGQFDQASIHFRKGIELGGDNAESY 244 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +VQ A + ++++ + + D+ + E Sbjct: 245 PLLVQSLSRGGAPDEAEAVARKGLQDSEPSAVLL----LELARLLVDRKAYADARETLSE 300 Query: 252 SLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + ++ + + A+ L S+ + +++ ++ ++ +P + H+ + + V Sbjct: 301 AHEIQPYDVEVLLLRARVSMWLDSREEAKRSLAMVRQLAPSDPEKLVRAALVHMEAGSFV 360 Query: 309 GKLKRALRLEEINKESVESLVIVSKIA-------LEMGSIDQAHAKAMLAMKIAPRKEIF 361 L R ++ + + ++ L G + A A ++++ P I Sbjct: 361 DALPLLERAVKVKPGYKDGVELLVDAHLQIGGKLLAAGDREAALASFDRSLEVMP-ISIE 419 Query: 362 LLL 364 L+ Sbjct: 420 TLM 422 >gi|195171564|ref|XP_002026575.1| GL21701 [Drosophila persimilis] gi|194111491|gb|EDW33534.1| GL21701 [Drosophila persimilis] Length = 915 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 553 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 610 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 611 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 670 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + + LK C SI + +A + Sbjct: 671 LLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAANTYTQGLKKCPTSIPLWVLSANLEERK 730 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 KA ILE+ N P++A ++ + LK Sbjct: 731 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 767 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 262 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEINAQSEDLW- 320 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 321 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 370 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 371 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 423 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 424 RKVLNKARENIPTDRQIWTTAAKLEEANGN 453 >gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 1056 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 6/216 (2%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+ A + Y + Y ++ +Y+ A + LQ Sbjct: 576 RGLVFQNKGEYDRA--IVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQH 633 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A R G+ + A +AL + P + E+ RAIT Sbjct: 634 NPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAIT 693 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L+Q + + A R KGD+ + D E+++L A + Sbjct: 694 DLDQALRLKPGF----ANPHYHRGTAFRHKGDLDRALADLNEAVRLNPKYADAYQERGVT 749 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++ + +A + ++ P E + + E Sbjct: 750 FQARGEPDRALADFAEAVRLKPELEADATFLKVRGE 785 >gi|71905787|ref|YP_283374.1| response regulator receiver:tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] gi|71845408|gb|AAZ44904.1| Response regulator receiver:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] Length = 449 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 32/257 (12%) Query: 126 EVQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + ++ LA + + +L+ P R SL+ ++ L A+ K +D Sbjct: 172 QAEVLLASGDAEASEKAYRSILENYEFPWARAGVARSLHKQNR----LTEARAEIDKVVD 227 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241 +P ++ + E + A L++ KK + + R R + A + + Sbjct: 228 STPHFFDASDLKASICMAQGEHAEAQKVLDEVAKKTPRNYLRKRML---AEAATLNGDSE 284 Query: 242 MIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVIL-------EKIWKVNPH 292 + + + +I + A+S + N K AE +L + + Sbjct: 285 TARATMADVIANDTMPGAISPEDRLTMARSHLDGNDKISAEKVLVGLRDVEIQAMNLAEQ 344 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 A + E + ++ + + V + AL + + A A Sbjct: 345 ASFAALLAISSPEKGKARFAGLRPALLASELGPTTSLDVMRAALSVSDHELADLHAEQ-- 402 Query: 353 KIAPRKEIFLLLAQIEQ 369 L+A IE Sbjct: 403 ----------LMAGIEA 409 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 71/222 (31%), Gaps = 23/222 (10%) Query: 161 YFESCRIG-DLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 Y E + A A + + P + + + + + + A + Sbjct: 137 YQEKRKQEYARALAILEAQRTSETGRPYRFEIQRQQAEVLLASGD-AEASEKAYRSILEN 195 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E+ RA + + + + + + + + AS A ++Q + + Sbjct: 196 YEFPWARA----GVARSLHKQNRLTEARAEIDKVVDSTPHFFDASDLKASICMAQGEHAE 251 Query: 279 AEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEE-INKES--VESLVI 330 A+ +L+++ K P +A L ++ + A + + E + Sbjct: 252 AQKVLDEVAKKTPRNYLRKRMLAEA-ATLNGDSETARATMADVIANDTMPGAISPEDRLT 310 Query: 331 VSKIALEMGSIDQA-------HAKAMLAMKIAPRKEIFLLLA 365 +++ L+ A + AM +A + LLA Sbjct: 311 MARSHLDGNDKISAEKVLVGLRDVEIQAMNLAEQASFAALLA 352 >gi|328700630|ref|XP_001950113.2| PREDICTED: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like isoform 1 [Acyrthosiphon pisum] Length = 1045 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 100/304 (32%), Gaps = 35/304 (11%) Query: 71 MLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVY 123 L + H GY L L++ A ++ A + + Q + L Sbjct: 110 ALDNYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPELYCVRSDLGN 167 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKA 180 LL+ + + A L+ TR A +L + ++ A + KA Sbjct: 168 LLKA-----LGRLDEAKSCY---LKAIETRPDFAVAWSNLGCVFNSLNEIWLAIHHFEKA 219 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P+ + ++ + R+++ + + A++ + ++G Sbjct: 220 VALDPNFLDAYINLGNVLKESRIFDRSVSAYLRALALSPT----NAVVHGNLACVYYEQG 275 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + +++L N A A +L + + AE K+ P H + N Sbjct: 276 LIDLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALKLCPTHADSLNNL 335 Query: 300 THLL------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ E T LK E ++ + + G + +A A++ Sbjct: 336 ANIKREQGYIEEATGLYLKALEVFPEFAAAHSN----LASVLQQQGKLTEALNHYQEAIR 391 Query: 354 IAPR 357 I P Sbjct: 392 IQPT 395 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + + L + T +L G ++ A +A+++ P+ P + Sbjct: 244 DRSVSAYLRALALSPTNAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPNFPDAYCNLAN 303 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N K A L + ++G + + +++L++ Sbjct: 304 ALKEKGQVVDAEECYNTALKLCPT----HADSLNNLANIKREQGYIEEATGLYLKALEVF 359 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A ++ ++ P A+ Y+++ + ++ L Sbjct: 360 PEFAAAHSNLASVLQQQGKLTEALNHYQEAIRIQPT--FADAYSNMGNTLKEMQDIQNAL 417 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A A+++ P Sbjct: 418 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALRLKPD 463 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 309 GQVVDAEECYNTALKLCPTHADSLNNL--ANIKREQGYIEEATGLYLKALEVFPEF-AAA 365 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I P + ++ A+ ++ + Sbjct: 366 HSNLASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQ 425 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +L+L + A A L Sbjct: 426 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALRLKPDFPDAYCNLAHCL 475 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%) Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + AL + P + A + + E+ A Sbjct: 314 AEECYNTALKLCPTHADSLNNLANIKREQGYIEEATGLYLKALEVFPEF----AAAHSNL 369 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 + +G + + + E++++ A +L + A + ++NP Sbjct: 370 ASVLQQQGKLTEALNHYQEAIRIQPTFADAYSNMGNTLKEMQDIQNALQCYSRAIQINPA 429 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 H +A+I H S N + + + ++ ++ Sbjct: 430 FADAHSNLASI--HKDSGNIPEAIASYRTALRLKPDFPDAYCNLA 472 >gi|322433067|ref|YP_004210316.1| hypothetical protein protein [Acidobacterium sp. MP5ACTX9] gi|321165294|gb|ADW70998.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] Length = 373 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 18/193 (9%) Query: 135 QYNIAHEKLEM---MLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 +Y+ A M A L R L AQ +A KAL + P P Sbjct: 177 KYDDARHAFAAQFGMEPDGAGAYLLAARML----LRREYLPVAQGFAEKALALQPGLPLA 232 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + + AI ++K + L A + Sbjct: 233 HALLGEIALAGNHLEEAIAQFEKEKISNPLEPSVYDRLGDAYGR----AARYTDAQASLQ 288 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL-LS 304 E++ L NS I K+++ Q A LE+ K++P H + Y + + Sbjct: 289 EAVLLEPNSTGPYILLGKTMLKQGDALGATTYLERAVKMDPANYMTHSLLGQAYRTMGRT 348 Query: 305 ENTVGKLKRALRL 317 E+ + A +L Sbjct: 349 EDASRETSTAQKL 361 >gi|320103411|ref|YP_004179002.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319750693|gb|ADV62453.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 315 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 7/229 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + L+ A + + +P +P V Y A A LNQ + Sbjct: 73 QAALETDRLDEAAQILNRLAAQNPHSPMVHYRRGVLYRKAGRPEEARACLNQALAIDPNY 132 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 L+ ++ +AD G + A+ + +L + A + L + +A Sbjct: 133 GE----ALVELAMLDADLGRTQIALERALTATRLDPTNGKAHAARGRLLADLGRDEEALA 188 Query: 282 ILEKIWKVNP-HPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + P PEI L R ++ E++ + E+ + I LE Sbjct: 189 AFHRALEWEPDDPEIQWRVAAIQRRRGRLEQSLARLAKVLELDPDHGEAHHLRGVIRLER 248 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 G I +A LA + P + + + +H D+ A Sbjct: 249 GRIAEAVEDLTLAAQRLPHRPEVHYHLALARQANHQLDQAREAVTQARR 297 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 80/247 (32%), Gaps = 13/247 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q AL + + A + L + Y + G A+ +AL I P Sbjct: 71 AAQAALETDRLDEAAQILNRLAAQNPHSPMVHYRRGVLYRKAGRPEEARACLNQALAIDP 130 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + +V+ +L + R L + A + AR AD G + Sbjct: 131 NYGEA---LVELAMLDADLGRTQIALERAL-TATRLDPTNGKAHAARGRLLADLGRDEEA 186 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 +L+ + A + + ++ L K+ +++ P+ + HL Sbjct: 187 LAAFHRALEWEPDDPEIQWRVAAIQRRRGRLEQSLARLAKVLELD--PDHGEAH-HLRGV 243 Query: 306 NTVGKLKRALRLEEIN------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + + A +E++ E ++ +DQA A ++ P + Sbjct: 244 IRLERGRIAEAVEDLTLAAQRLPHRPEVHYHLALARQANHQLDQAREAVTQARRLDPTFQ 303 Query: 360 IFLLLAQ 366 +L + Sbjct: 304 AAAILEE 310 >gi|209523077|ref|ZP_03271634.1| sulfotransferase [Arthrospira maxima CS-328] gi|209496664|gb|EDZ96962.1| sulfotransferase [Arthrospira maxima CS-328] Length = 714 Score = 47.2 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 14/229 (6%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A KA+ I P+ ++ + + +V ++W AI Q + + + Sbjct: 166 AIAIYAKAMAIYPNVAEISYNLGETFVNCEQWESAINAYKQALEIDPDLY----YVYSRL 221 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ + + E LKL + ++ + Q ++A +K + P Sbjct: 222 GDVFTEQKNYQDAIAAYQECLKLKPDIDWINLKLGEICQKQGDIKQAIAAYQKGITIQPK 281 Query: 293 ---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHA 346 P + + E+ L + + +S +I +++ A+ +QA Sbjct: 282 LTWPYLKLLELLNHLESWQEIFSNYKELLNNHPD--KSAIIHQKLAEAAVRFKKWNQAIK 339 Query: 347 KAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 A++I P + L LAQI I + A++ P W Sbjct: 340 NFQKALEIDPECFDACLQLAQIFLRQGKPIKAIEAYI-KAVNIRPHFYW 387 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 5/161 (3%) Query: 133 ERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 ++ Y A + + P + L + GD+ A K + I P W Sbjct: 228 QKNYQDAIAAYQECLKLKPDIDWINLK-LGEICQKQGDIKQAIAAYQKGITIQPKLTWPY 286 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +++ + W + + N + AI+ + + + + Sbjct: 287 LKLLELLNHLESWQEIFSNYKELLNNHPD---KSAIIHQKLAEAAVRFKKWNQAIKNFQK 343 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +L++ A + A+ + Q K KA K + PH Sbjct: 344 ALEIDPECFDACLQLAQIFLRQGKPIKAIEAYIKAVNIRPH 384 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 6/127 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G+ + A+ KAL+I P+ V + + +W AI + + ++ Sbjct: 56 QGEFDQAEASYKKALEIEPNFAEVYANLGSLFAQKNDWQSAINCYEKAIEIKPDFGGVYR 115 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSI--MASICAAKSLISQNKKRKAEVILE 284 L + + + ++++ + ++ + AK+L +Q K +A I Sbjct: 116 NL----AKVFGQINQQDKANYCWLKAINIEPQNVNLPEYLEVAKALDNQGKFPQAIAIYA 171 Query: 285 KIWKVNP 291 K + P Sbjct: 172 KAMAIYP 178 >gi|268317307|ref|YP_003291026.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262334841|gb|ACY48638.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM 4252] Length = 906 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 1/100 (1%) Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFL 362 NT L ++ + ++ E + ++++ + G +D+A A + P + Sbjct: 700 EGNTRRALDAFEQVSRLAPDNPEGPINLARVLIAEGQLDRAMEALAEAERRRPGYLKTAY 759 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLS 402 +I Q + W + D + + + G + Sbjct: 760 FRGKIYQRQGEYDRALDEWMKVVARYPRDRVLLQEIGRIH 799 >gi|149924835|ref|ZP_01913174.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] gi|149814295|gb|EDM73898.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] Length = 2568 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 77/260 (29%), Gaps = 30/260 (11%) Query: 113 QHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 H + L +LEVQ A L A Q+ +R GD Sbjct: 1115 DHRGRYDELAEVLEVQAAKVLDAGDTEAASGLFLRTAQLAESRL-------------GDK 1161 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A R + ++++P +A+ + Y A T+L ++ ++ + R +L + Sbjct: 1162 EQATRAYLRVVELAPSNA-ALDALARLYASQDRPDTAATYLERRLEDTPDSERVAILLKL 1220 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 AR+ A+ + + + + ++ L Sbjct: 1221 ARARIAAE--QREKAVQALETAFAEAPRNGEVRKLLIRLHRERDDIASLARTLATAAGAV 1278 Query: 291 PHPEIANIYTH---------LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P Y E V L+RA + + ++++ G + Sbjct: 1279 GDPNTVVAYAREAAELYDTLGTPEAAVPVLERAHEFA---PDDRDLRLMLADGLRGAGRL 1335 Query: 342 DQAHAKAMLAMKIAPRKEIF 361 D+A + R+ Sbjct: 1336 DEARELLEALIASFGRRRSA 1355 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 63/223 (28%), Gaps = 9/223 (4%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 L +R K L +A+ + + + L+ Q Sbjct: 1343 EALIASFGRRRSAKRAVVHSR-LARVASAQGKVEEAIDQLERASKMAAGDVLILRDLAQT 1401 Query: 130 ALAERQYNIAHEKLEMML--------QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 A + Q++ A +L P +L + G + A L Sbjct: 1402 AQSAGQHDRAERAYRTLLLSLRRAGKDAPIGAGEVYLALAAIADERGQADKAAELRESVL 1461 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + + + ++++ L ++ K R +L + D GD Sbjct: 1462 EAVTEDDSQAPRIQAALREREDFAFLRRVLEARRDGVKSARRKAKVLAALGDVLENDLGD 1521 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+ +++++ +S + + + +LE Sbjct: 1522 KDAALEARLQAVEADPSSPPLHDAVQPLAVELGRTERYAKLLE 1564 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 35/216 (16%) Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARSLENA 237 L+ P P A+ + + L K +A + + L L + Sbjct: 1097 LEERPGHPESIAALSELLDHRGRYDELAEVLEVQAAKVLDAGDTEAASGLFLRTAQLAES 1156 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 GD + + ++L ++ A++ A A+ SQ++ P+ A Sbjct: 1157 RLGDKEQATRAYLRVVELAPSN--AALDALARLYASQDR-----------------PDTA 1197 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y E+T +R L + +++ + ++A A AP Sbjct: 1198 ATYLERRLEDTPD-SERVAIL-----------LKLARARIAAEQREKAVQALETAFAEAP 1245 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 R L + + +A A+ DP Sbjct: 1246 RNGEVRKLLIRLHRERDDIASLARTLATAAGAVGDP 1281 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 44/332 (13%) Query: 99 NIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + + + E V LE A A R + + + + A Sbjct: 1210 DSERVAILLKLARARIAAEQREKAVQALETAFAEAPRNGEVRKLLIRLHRERDDIASLA- 1268 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQ------------------ 197 +L + +GD N+ YA +A ++ P V+++ Sbjct: 1269 RTLATAAGAVGDPNTVVAYAREAAELYDTLGTPEAAVPVLERAHEFAPDDRDLRLMLADG 1328 Query: 198 YVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 A A L + + + RA++ + + +G + + + K+ Sbjct: 1329 LRGAGRLDEARELLEALIASFGRRRSAKRAVVHSRLARVASAQGKVEEAIDQLERASKMA 1388 Query: 257 DNSIMASICAAKSLISQNKKRKAEVI-------LEKIWKVNP------HPEIANIYTHLL 303 ++ A++ S + +AE L + K P + +A I Sbjct: 1389 AGDVLILRDLAQTAQSAGQHDRAERAYRTLLLSLRRAGKDAPIGAGEVYLALAAIADERG 1448 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIAL-EMGSIDQAHAKAMLAMKIAPRKE--- 359 + +L R LE + ++ S + AL E Sbjct: 1449 QADKAAEL-RESVLEAVTEDD--SQAPRIQAALREREDFAFLRRVLEARRDGVKSARRKA 1505 Query: 360 -IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + L + + + + D L A+ A P Sbjct: 1506 KVLAALGDVLENDLGDKDAALEARLQAVEADP 1537 >gi|109089878|ref|XP_001086302.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 2 [Macaca mulatta] Length = 472 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 68/220 (30%), Gaps = 37/220 (16%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVQEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLE--EINKESVESLVIVSKIALEMG 339 + P H +I Y RA L+ + + + + ++ Sbjct: 274 LEYLPNNAYLHCQIGCCY-------------RAKVLQVMNLRENGIYGKRKLLEL----- 315 Query: 340 SIDQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 I A A A + + +LA + E+A Sbjct: 316 -IGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354 >gi|319443727|pdb|3PE3|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex With A Peptide Substrate gi|319443728|pdb|3PE3|B Chain B, Structure Of Human O-Glcnac Transferase And Its Complex With A Peptide Substrate gi|319443729|pdb|3PE3|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex With A Peptide Substrate gi|319443730|pdb|3PE3|D Chain D, Structure Of Human O-Glcnac Transferase And Its Complex With A Peptide Substrate gi|319443731|pdb|3PE4|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex With A Peptide Substrate gi|319443733|pdb|3PE4|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex With A Peptide Substrate Length = 723 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 6/154 (3%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 H + L L I + A L++ A +L + G L A + Sbjct: 8 HADSLNNL--ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMH 65 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +A+ ISP + ++ A+ + + + A + + Sbjct: 66 YKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF----ADAHSNLASIH 121 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 D G++ + +LKL + A A L Sbjct: 122 KDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 155 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 45/153 (29%), Gaps = 11/153 (7%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + A+ + + E+ A + +G + Sbjct: 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF----AAAHSNLASVLQQQGKLQE 61 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299 + E++++ A +L + A + ++NP H +A+I Sbjct: 62 ALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASI- 120 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVS 332 H S N + ++ + ++ ++ Sbjct: 121 -HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 152 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 59/125 (47%), Gaps = 7/125 (5%) Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G++ + ++L++ A A L Q K ++A + ++ +++P A+ Sbjct: 21 EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT--FAD 78 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 79 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 138 Query: 353 KIAPR 357 K+ P Sbjct: 139 KLKPD 143 >gi|322420317|ref|YP_004199540.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320126704|gb|ADW14264.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 406 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 76/216 (35%), Gaps = 13/216 (6%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPW 189 + + A E +++ T + + + R ++ A + AL++ P+AP Sbjct: 197 QDLGRNDEAITYYEKAVKLVPTH-VGCQNNFGAALLRANRIDEALEHCNTALELDPNAPL 255 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 V + ++L ++++ A + L A E A GD+ Sbjct: 256 VKINLGYIHLLKQDYTAARNNFRDALALNDKLAPAYYGLASA---EQALGGDVKRIQELY 312 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKR----KAEVILEKIWKVNPHPEIANIYTHL-LS 304 ++++ + A A L SQN ++ A + N + L Sbjct: 313 EKAVETNPSIAEAHYALANILASQNDQQALSHYATALQLNSSLPNLRRDFGYTCLQLGRR 372 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 E + +LK A+ L N + + ++++ G Sbjct: 373 EEALEQLKLAVML---NPDDPVARDLLAQAQGASGE 405 Score = 43.4 bits (101), Expect = 0.097, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 86/238 (36%), Gaps = 14/238 (5%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 Y+ A L+ L+ A+Y+ +G + A Y KA+ + P Sbjct: 168 YDYAESVLQEALKHAPYHFGALYTYAVLLQDLGRNDEAITYYEKAVKLVPTHVGCQNNFG 227 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + A A+ N + ++ I + K D A+ ++ ++L L Sbjct: 228 AALLRANRIDEALEHCNTALELDPNAP----LVKINLGYIHLLKQDYTAARNNFRDALAL 283 Query: 256 CDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVG 309 D A A + + ++ + + EK + NP H +ANI L S+N Sbjct: 284 NDKLAPAYYGLASAEQALGGDVKRIQELYEKAVETNPSIAEAHYALANI---LASQNDQQ 340 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQ 366 L ++N L++G ++A + LA+ + P + LLAQ Sbjct: 341 ALSHYATALQLNSSLPNLRRDFGYTCLQLGRREEALEQLKLAVMLNPDDPVARDLLAQ 398 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 14/171 (8%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GD 169 + N LV + I L ++ Y A L + A Y L + GD Sbjct: 245 TALELDPNAPLVKINLGYIHLLKQDYTAARNNFRDALALNDKLAPAYYGLASAEQALGGD 304 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + Q KA++ +P A+ + +A++ + R Sbjct: 305 VKRIQELYEKAVETNPSIAEAHYALANILASQND-QQALSHYATALQLNSSLPNLR---- 359 Query: 230 IARSLENADKGDMIASYHDAIESLKLC----DNSIMASICAAKSLISQNKK 276 + + +A+E LKL + +A A++ + + Sbjct: 360 ----RDFGYTCLQLGRREEALEQLKLAVMLNPDDPVARDLLAQAQGASGEA 406 >gi|164658385|ref|XP_001730318.1| hypothetical protein MGL_2700 [Malassezia globosa CBS 7966] gi|159104213|gb|EDP43104.1| hypothetical protein MGL_2700 [Malassezia globosa CBS 7966] Length = 917 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 87/277 (31%), Gaps = 26/277 (9%) Query: 124 LLEVQIALAERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL + A + L + A +GD+++A + + Sbjct: 585 LLYADDRRRAGDVSGARTILARAFDANLGSESISLAA----ATLESDLGDMHAAAKLLMR 640 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + V VQ + A+T + + ++ K Sbjct: 641 AREEVRTER-VWITSVQVAWRQGAYDDALTLAKNALERFPALE----AVYTMQARLYETK 695 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 GD+ A+ + C SIM + +++ +A +LEK + +P + Sbjct: 696 GDLGAAREALAAGRRACPTSIMLWLLSSRLEERTGALIRARALLEKGRQAHPTSD----- 750 Query: 300 THLLSENTVGKLKR-----ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L +E+ +L+ A L ++ S + A+ + ++A A++ Sbjct: 751 -ELWAESAAVELRANSAAQAKTLLSRGLQACPSSGRLLSAAIWLEPRPARKSRAADALRR 809 Query: 355 APRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + + +A++ + W + A Sbjct: 810 SADSPYVICTVARLFWDEGR-YTQARDWFTKTVQAAR 845 >gi|195127943|ref|XP_002008426.1| GI13491 [Drosophila mojavensis] gi|193920035|gb|EDW18902.1| GI13491 [Drosophila mojavensis] Length = 899 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 537 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 594 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 595 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALERLDEALR 654 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + +LK C SI I +A + Sbjct: 655 LLAEAVEVFPDFPKLWMMKGQIEEQQQRTDDAAATYTLALKKCPTSIPLWILSANLEERK 714 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 KA ILE+ N P++A ++ + LK Sbjct: 715 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 751 >gi|32471678|ref|NP_864671.1| DNA-directed RNA polymerase alpha chain [Rhodopirellula baltica SH 1] gi|32397049|emb|CAD72353.1| probable DNA-directed RNA polymerase alpha chain [Rhodopirellula baltica SH 1] gi|327539093|gb|EGF25725.1| RNA polymerase alpha subunit domain protein [Rhodopirellula baltica WH47] Length = 500 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 40/134 (29%), Gaps = 5/134 (3%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + A + + A++ L E+ R+G+ + A R +A P Sbjct: 220 AATAAQIGGRMEEAINLYQRAVSTDENHAGALFGLALENDRLGNDDEALRLYERAAKAFP 279 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + Y ++ +A + + R + + A + N + Sbjct: 280 TGIGALINLGVMYEDNGQYDKAQLCYKRILDCHPDHPRTQLYMKDASATGNMLYDEEAQR 339 Query: 246 YHDAIESLKLCDNS 259 +D +L Sbjct: 340 RND-----RLAQTL 348 >gi|332859018|ref|XP_514793.3| PREDICTED: pre-mRNA-processing factor 6 isoform 4 [Pan troglodytes] Length = 899 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 286 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 342 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 343 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 394 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 395 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 447 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 448 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 493 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 577 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 634 Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + S WV + + A + ++ +++ + L + + K Sbjct: 635 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 680 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 M + + LK C +S + ++ + +A ILEK NP +P + Sbjct: 681 EMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 740 Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356 L + + A L +E S ++ S+ A+ + + Q K++ A+K Sbjct: 741 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 797 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +A++ + K W + D Sbjct: 798 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 831 >gi|313675474|ref|YP_004053470.1| hypothetical protein [Marivirga tractuosa DSM 4126] gi|312942172|gb|ADR21362.1| Tetratricopeptide TPR_1 repeat-containing protein [Marivirga tractuosa DSM 4126] Length = 1579 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 85/283 (30%), Gaps = 40/283 (14%) Query: 129 IALAERQYNIAHEKLEMMLQIP-------ATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 A E + + R A Y L + I D+ + +A Sbjct: 1307 AKQLNGNLEQAIEDYDQAIATDGEYARAYENRASARYELENYAGVIEDVEKLEDL-EEA- 1364 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P+ + Y ++W AI++ + + +A R + D Sbjct: 1365 --GPN---AFYIKAESYYAVEDWVGAISYFERSIQ----GEVVKADSYFKRGRSYLEVED 1415 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299 A+ D + + ++ + A+ + R A K + PE + Y Sbjct: 1416 YQAALDDFNRAAEADPSNASIYLYRAQCYLYLGDVRYAAEDYSKAITLE--PENTDAYYN 1473 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA- 355 +EN G L+ ++ ++N E + + + + A A+++ Sbjct: 1474 RAILREETENWEGALQDYDKVVQLNPEDASAYYYRGNVKAVLENYQPALKDLNKAIELNS 1533 Query: 356 PRKEIFLLLAQI--------------EQANSHNTDKILYWTQS 384 + L I E+A + D + Y+ + Sbjct: 1534 EDASYYKLRGNIHYQLEDDLKACEDWERAKNMGDDSVNYYLRQ 1576 >gi|288939973|ref|YP_003442213.1| family 2 glycosyl transferase [Allochromatium vinosum DSM 180] gi|288895345|gb|ADC61181.1| glycosyl transferase family 2 [Allochromatium vinosum DSM 180] Length = 981 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 14/108 (12%) Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 W + Y + ++ KR ++ + + ++ A+ +G Q Sbjct: 171 AAWS------LGRWYAWMDQWPEAARVMKRFSQIADPVPGHLAPHLLDIDAAMRVGEFGQ 224 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQ----IEQANSHNTDKILY---WTQS 384 AH + ++ P LLA E + + I W Sbjct: 225 AHDRLKPLLERRPDHADLCLLAANLIQAEAQDDRDDTAIRQRLAWINR 272 >gi|212638951|ref|YP_002315471.1| TPR -repeat containing protein [Anoxybacillus flavithermus WK1] gi|212560431|gb|ACJ33486.1| TPR repeat protein [Anoxybacillus flavithermus WK1] Length = 427 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 67/196 (34%), Gaps = 25/196 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--------REFAVY 158 + NE LV ++ QY + E ++ T R Y Sbjct: 131 QKLLKAYEKMPNEPLVQFALAELYFTNGQYQKSLLYYEQIITKTKTIAGTVIAQRIAEAY 190 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 SL G+ A Y +AL+ DA + Q A + + A K Sbjct: 191 SLL------GEFEQALSYYEQALNERFDA----HTLFQYGFTAYQ-AEAYKTAIAKLSEL 239 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC---DNSIMASICAAKSLISQNK 275 K +R L + + +GD+ SY A E L + + + A K + K Sbjct: 240 KALDREYVPLYLFLAKSYEQEGDIQQSYEIAKEGLTIDEWNKQLL---VYAGKIALKIGK 296 Query: 276 KRKAEVILEKIWKVNP 291 + +A + +EK ++P Sbjct: 297 REEALMYIEKALDIDP 312 >gi|119595582|gb|EAW75176.1| chromosome 20 open reading frame 14, isoform CRA_c [Homo sapiens] Length = 901 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + S WV + + A + ++ +++ + L + + K Sbjct: 637 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 682 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 M + + LK C +S + ++ + +A ILEK NP +P + Sbjct: 683 EMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 742 Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356 L + + A L +E S ++ S+ A+ + + Q K++ A+K Sbjct: 743 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 799 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +A++ + K W + D Sbjct: 800 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 833 >gi|23014824|ref|ZP_00054622.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 569 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 74/251 (29%), Gaps = 7/251 (2%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + L LL +A+ + A+ M + FA L + + Sbjct: 297 ALSLRPDFPLAQLLLADAMMAQGRLEDANTLYRSMNRASQPGAFARLKLAVNLDELKQTD 356 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLI 230 +A PD+P + K +S A R L Sbjct: 357 AAIAELKSLAAEWPDSPEAMMTLGDILRRHKRYSEAADAYGTALARNNGAKEPRNWALYY 416 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKV 289 AR + + D +E+L+L + + + Q K ++E+ ++ Sbjct: 417 ARGIAYERAKQWSKAEPDMLEALRLSPDQPDVLNYLGYTWVDQGINVEKGRKLIERAVEL 476 Query: 290 NPHPEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P+ + A + + +K R E+ E + +G +A Sbjct: 477 RPN-DGAIVDSLGWALYRMGEFQAAVKYLERASELKPEDATVNEHLGDAFWRVGRETEAR 535 Query: 346 AKAMLAMKIAP 356 + AM + P Sbjct: 536 YQWKRAMGLDP 546 >gi|330507412|ref|YP_004383840.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328928220|gb|AEB68022.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 1286 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 14/147 (9%) Query: 127 VQIALAERQYNIAHEKLEMM------LQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L + A E + L ++Y L GDL A K Sbjct: 598 AGVYLQSGEEERAEELYQQSIDGFRELGDARGEARSLYGLARSMAERGDLEGALECYRKC 657 Query: 181 LDI------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 LD+ S E++V + W A+T Q + + + A+ + +L Sbjct: 658 LDLQIVGGDSRSMIEALESMVNLLLRRGRWQEALTRYAQVLEALRSRDDLSAVAAVQCAL 717 Query: 235 E--NADKGDMIASYHDAIESLKLCDNS 259 +AD G + D ESL + + Sbjct: 718 GNLHADLGQWDEALEDYNESLAIMEGL 744 >gi|319942688|ref|ZP_08016995.1| hypothetical protein HMPREF9464_02214 [Sutterella wadsworthensis 3_1_45B] gi|319803771|gb|EFW00706.1| hypothetical protein HMPREF9464_02214 [Sutterella wadsworthensis 3_1_45B] Length = 419 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 89/291 (30%), Gaps = 49/291 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREF 155 A ++H ++ + +E L+ Q LA ++ A + +P+ + Sbjct: 117 GEFERAVRLHRHLYNRADLSDEERALALKELAQDFLAAGFFDRAEAAYRKLSSVPSEHLY 176 Query: 156 AVYSLY----FESCRIGDLNSAQRYATKALDISPDAPWVTEA---VVQQYVLAKEWSRAI 208 A+ L E +A+ T+A + + + + Q + AK A Sbjct: 177 ALRQLLSIYVIEHEWAAATETARLLETQAGETH--SLEIAHFYCERIDQALRAKRSEDAR 234 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-A 267 + Q K A R + + + G + ++ + I A Sbjct: 235 LLVEQLMKYADATPRAQMTI----AKVAEAAGATTEAVRWWRRVIEKNPDYAPLVIGKLA 290 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 ++ Q + A +L +T +L A +E Sbjct: 291 DAMNEQGDRAGALKLLL---------------------DTTERLSTADVMEA-------- 321 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 +S+IA I A A ++ P + L QI + + D + Sbjct: 322 --TLSRIA-AWQGIGAAETLAQSLLEKHPTLSAYNALLQI-RLKGNPDDPM 368 >gi|183221154|ref|YP_001839150.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911245|ref|YP_001962800.1| serine phosphatase RsbU [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775921|gb|ABZ94222.1| Serine phosphatase RsbU, regulator of sigma subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779576|gb|ABZ97874.1| Hypothetical protein with TRP repeats [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 606 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 3/132 (2%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +S + A A KA I + + + Y ++ AI +L + + + Sbjct: 458 LAKQSNSKMKMEEAYAQALKAFSIDSSLKEILVFLGKMYYRDGKYKEAIRYLEEYLRTSG 517 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + N A G + + +L + ASI A+ + +N K KA Sbjct: 518 D---NTAASHFTMGRAYYKAGMISEAKRALKMALSSDHSFAKASILLAQCYLKENAKPKA 574 Query: 280 EVILEKIWKVNP 291 +L++ K P Sbjct: 575 IKVLQQGVKNTP 586 >gi|154300308|ref|XP_001550570.1| hypothetical protein BC1G_11343 [Botryotinia fuckeliana B05.10] gi|150856666|gb|EDN31858.1| hypothetical protein BC1G_11343 [Botryotinia fuckeliana B05.10] Length = 530 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 59/191 (30%), Gaps = 9/191 (4%) Query: 108 SYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFES 164 S +S + + LL LA+ + N A ++ + + + Sbjct: 24 SALSANDIPSDTPISSLLASANAHLAKGETNDALTYYDIAIARDPSNYLSHFRRG--AAY 81 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-ITFLNQKKKNAKE--- 220 +G + A + K L I P + +W A +L+ + E Sbjct: 82 LSLGRMAQAAQDFDKVLTIKPGHEPALSQRAKIRAKNGDWENAKQDYLSLGASHGAEEEL 141 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 N A + +++ + A ++ + + A + + ++ Sbjct: 142 ANLVEAQGAASLAMDAEKDQNWEECVTQAGAAIMVASKVVSLRKTRAHCRFERGEVQEGM 201 Query: 281 VILEKIWKVNP 291 L+ + ++ P Sbjct: 202 SDLKHVLQMQP 212 >gi|332262341|ref|XP_003280219.1| PREDICTED: pre-mRNA-processing factor 6 isoform 2 [Nomascus leucogenys] Length = 901 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + S WV + + A + ++ +++ + L + + K Sbjct: 637 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 682 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 M + + LK C +S + ++ + +A ILEK NP +P + Sbjct: 683 EMMERAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 742 Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356 L + + A L +E S ++ S+ A+ + + Q K++ A+K Sbjct: 743 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 799 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +A++ + K W + D Sbjct: 800 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 833 >gi|322706857|gb|EFY98436.1| mitochondrial outer membrane 72K protein [Metarhizium anisopliae ARSEF 23] Length = 622 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 5/197 (2%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +S+ A + ++ VY Q + + A + + + + Sbjct: 378 ISLELGEPDKAD--AEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKD 435 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 F+ L ++G + S+ + + P P V + + +S A+ + Sbjct: 436 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQSNFSEAVEKFD 495 Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + K+ + LI ++L K D + ++L + +A A+ Sbjct: 496 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEQLCQKALIIDPECDIAVATMAQL 555 Query: 270 LISQNKKRKAEVILEKI 286 L+ QNK +A E+ Sbjct: 556 LLQQNKVTEALKYFERA 572 >gi|170034036|ref|XP_001844881.1| Oseg1 [Culex quinquefasciatus] gi|167875289|gb|EDS38672.1| Oseg1 [Culex quinquefasciatus] Length = 1166 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 73/245 (29%), Gaps = 45/245 (18%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q AL Y+IA E + +P + + E + GD + A Sbjct: 602 AQAALEALNYHIAREAYVKVRNLP---WLELINDLKERQKRGDNSKEVLLA--------- 649 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 Y ++ A + N+K + + + E +G Sbjct: 650 ---------DTYAFTGKFKEAARLYQKSGNNSKALAMYSDLRMFDLAQEFLKEGSAADKK 700 Query: 247 HDA-IESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHLLS 304 + C + AA+ L+S + ++A I+ E+ W + +I L + Sbjct: 701 ELIRRRAEWACSVHEPRA--AAELLLSAGESQRAIEIVAEQGWTDV----LLDIGRRLNA 754 Query: 305 ENT------VGKLKRALRLEEINKESVESLVIVSK------IALEMGSIDQAHAKAMLAM 352 L+R L + E + + + +E +A A Sbjct: 755 SEKEPLELIATHLRRLKAL----PLAAEIYRKLGEEEQVVQLHVEARDWPEAFRLAEHLP 810 Query: 353 KIAPR 357 KI P Sbjct: 811 KILPS 815 >gi|110738736|dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thaliana] Length = 808 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + L + +W + + + +G ++++ E+ LC A Sbjct: 292 LLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLG 351 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322 +L + R A LE+ + P H ++A+ H + E+ ++ R ++ Sbjct: 352 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHSMGEDERA-IEVFQRAIDLKP 409 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++L + + +++G +A + + P L + + T++ Sbjct: 410 GHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLNKAVSLLGAGETEEAKRAL 469 Query: 383 QSALH 387 + AL Sbjct: 470 KEALK 474 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 RA+ L+ +L G+ A+ E++ L + A A SL S + +A Sbjct: 342 THFRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIE 399 Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331 + ++ + P H + + +Y L G+ +RA L + + Sbjct: 400 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLTVW-PNHWRAQLNK 452 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + L G ++A A+K+ R Sbjct: 453 AVSLLGAGETEEAKRALKEALKLTNR 478 >gi|313224512|emb|CBY20302.1| unnamed protein product [Oikopleura dioica] Length = 929 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 105/301 (34%), Gaps = 41/301 (13%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+QY E + ML+ P + + + GD+ SA+ +A + Sbjct: 565 RAAFLEKQY-GTKESYDNMLERAVKACPREEKLWLMG-AKSKWQQGDIRSARGILEQAFE 622 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------LIARSLE 235 + + + A V+ E RA L + + +A + +++ Sbjct: 623 SNQQSEEIWLAAVKLESENNELLRARQILARARTSASSPRVMMKSAKLEWCLGELKNAIK 682 Query: 236 NADKG----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 +D+G D ++ + ++ C +S I A S+ Sbjct: 683 LSDEGLAKYPKFDKLWMMKGTIFLQMKDANSARKAFAKGIENCKDSKPLWILLADLEESE 742 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIV 331 + KA +LE+ NP PE+ L + R L +E S + Sbjct: 743 GNQVKARSVLERARLKNPASPELWKRAIELEKRVSGNEIADRLLSRAGAMQECAASGSLW 802 Query: 332 SKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ A+E S K++ A+K ++ L +A++ + +K W + P Sbjct: 803 AE-AIECASRPARKTKSIDALKKCEHDPQVLLAVARMFWSERR-INKAREWFKKCTKIDP 860 Query: 391 D 391 D Sbjct: 861 D 861 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 85/230 (36%), Gaps = 32/230 (13%) Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A+ + +P P W+ A +++ + + A + + + ++ Sbjct: 276 DVRKARLLLKSVRETNPKQPQAWIGSARLEE--VVGRLAEARVLI---MQGTDKCPKSED 330 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEK 285 + L A L AD+ I + ++ NS+ AA + KR+ + LE Sbjct: 331 VWLEASRLAPADQAKKIFA-----AAVAEIPNSVRIWCAAANLEKEKKAKRRVYQRALEN 385 Query: 286 IWKVNPHPE---IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P + L ++ L RA E S E + ++K+ + Sbjct: 386 V------PNAVRLWKAAVELEEIDDAKELLTRA---VECCPSSAELWLALAKL----ETY 432 Query: 342 DQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 D A A P K +++ A++E+AN + + + AL A+ Sbjct: 433 DNARKVLNKARATIPTDKSVWITAAKLEEANGKSERCAIV-IKRALEALR 481 >gi|167623974|ref|YP_001674268.1| tetratricopeptide repeat-containing protein [Shewanella halifaxensis HAW-EB4] gi|167353996|gb|ABZ76609.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4] Length = 386 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 92/247 (37%), Gaps = 26/247 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + + ++ P R+ A+ L + G + A+ ++ + Sbjct: 83 GEVDRSIRIHQNLIARPSLTTEQRDLAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEE 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y + K+W +AI + + K+K +E + A + E D+ + + Sbjct: 143 AETQLIAIYQVTKDWQKAIDIIKKLKRKRQQELKHDTAHFYCELADETEDETLKLKNLQL 202 Query: 249 AIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK--IWKVNPHPE-IA---NIYTH 301 AI+ C ++ A A+ + Q + + + +EK ++ P+ +A Y Sbjct: 203 AIKQDSQCPR----ALLALAEQYLRQEEFKACKQAIEKLLTTDIDFLPDALAIAKQAYL- 257 Query: 302 LLSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + +++T L E+ + +++ +E G A M + P Sbjct: 258 ITNDSTG-----YQELLREAIENGAGASITITLAQHMIEQGHPKDAEKLIMEGLIRHPTM 312 Query: 359 EIFL-LL 364 + F L+ Sbjct: 313 KSFQHLM 319 >gi|47848089|dbj|BAD21873.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] gi|47848095|dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] Length = 953 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 14/240 (5%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181 LL + E + P Y + GD++ A RY A+ Sbjct: 116 LLLGAIYYQIRNYDMCIAKNEEALAIDPN--FAECYGNMANAWKEKGDVDLAIRYYLTAI 173 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P+ + Y W + Q + A N +G Sbjct: 174 QLRPNFCDAWSNLASAYT----WKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGF 229 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +Y+ IE+L++ +A A + KA + ++ K+ P A+ Y + Sbjct: 230 IQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLK--PSFADAYLN 287 Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + R + + + ++ I E G +D A A+ P Sbjct: 288 QGNVYKTMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 56/188 (29%), Gaps = 18/188 (9%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-- 151 + A + + + L L++ Q A+ E + P Sbjct: 194 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYNCYIEALRIDPQFA 248 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L+ E+ GDL+ A Y +A+ + P Y AI Sbjct: 249 IAWSNLAGLFMEA---GDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISY 305 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + ++ A+ + ++G + + +++ + A +L Sbjct: 306 QRAVQARPDY----AMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALK 361 Query: 272 SQNKKRKA 279 + +A Sbjct: 362 DAGRVEEA 369 >gi|315180633|gb|ADT87547.1| tetratricopeptide repeat family protein [Vibrio furnissii NCTC 11218] Length = 389 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 48/339 (14%), Positives = 99/339 (29%), Gaps = 59/339 (17%) Query: 98 HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + + L + + + A E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIEQKNLALQQLAKDYMVSGFLDRAERIFEQLVDEPEHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + + Y +EW +AI + Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIDCAHALI 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K ++ + A +++ G + ++L+ + ASI K + Sbjct: 169 KMGRKRMKASIAHFWCELAMQEKADGHDNKAIQLFKKALQEDPKCVRASISLGKLYLESE 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +K +E + + P +A Y HL E + + R + + S E Sbjct: 229 DYKKTIQYMEMVLDQDIDFIGEVLPTLAECYHHLGQEQELVQFLR-QCISDKAGVSAE-- 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYWTQS-- 384 ++++++ + + A + P + F L I +A L Q Sbjct: 286 LMLAQLVAQHEGVASAQELLTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQKLV 345 Query: 385 --ALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 L A P + S+ W P K Sbjct: 346 GEQLKAK--PHYRCRRCGFSTHSLYWH--CPSCKGWGSI 380 >gi|289548649|ref|YP_003473637.1| hypothetical protein Thal_0878 [Thermocrinis albus DSM 14484] gi|289182266|gb|ADC89510.1| Tetratricopeptide TPR_2 repeat protein [Thermocrinis albus DSM 14484] Length = 850 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 20/175 (11%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSL--YFESCRIGDLNSA 173 + LL+ + L A L P T RE + L + E D N A Sbjct: 457 DDRLQARLLKAEAYLLLGNPAKARSYL-----TPQTDRELYLLGLSYFME----EDYNKA 507 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIA 231 + ++ + SP P + + + S+A + + + + R + L+ Sbjct: 508 VEFFSRVPESSPLRPQALLKMGDAFYNMGDLSKAQETYRKVIEEYPDTPYARQATLALLE 567 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVIL 283 N + D + K +S A AK I QN+ A+ +L Sbjct: 568 AKPTNMNIEQETKLIEDYL---KKDPDSPTAQHLKLQLAKLYIQQNRLSDAQRLL 619 >gi|254670171|emb|CBA05243.1| putative membrane protein [Neisseria meningitidis alpha153] Length = 402 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 49/347 (14%), Positives = 112/347 (32%), Gaps = 49/347 (14%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155 AR++ + QQ ++ L ++ + + A + +L P T R Sbjct: 70 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQTLLDSPDTTGAKRAR 126 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ L G ++ A++ L + A + ++ Y ++W +AI Sbjct: 127 VLFELAQNYQSAGLVDRAEQIF---LSLQDGEMAREARQHLLNIYQQDRDWEKAIETAQL 183 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAKSL 270 + + + A + K + + A+E+ K C A++ Sbjct: 184 LSHDEQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKC---TRANMILGDIE 240 Query: 271 ISQNK---KRKAEVILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRALRLEE 319 Q +A +E+ + ++ + Y E + +L + L+ Sbjct: 241 YRQGNFPASVEAYAAIEQQNHAYLSMVGEKLYDAYAAQGKPEEGLNRLIGYMQTFPELDL 300 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL-AQIEQANS---HN 374 IN +SL++ + +A A+ ++ P ++ LL +I + + Sbjct: 301 INVVYEKSLLLRGE--------KEAAQTAIELVRRKPDLNGVYRLLGLRISDMDPTWKAD 352 Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 D + L ++ + + S W P F Sbjct: 353 ADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 395 >gi|317504510|ref|ZP_07962486.1| tetratricopeptide (TPR) domain protein [Prevotella salivae DSM 15606] gi|315664371|gb|EFV04062.1| tetratricopeptide (TPR) domain protein [Prevotella salivae DSM 15606] Length = 557 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 71/248 (28%), Gaps = 31/248 (12%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAH------------NIPLARKMHSYVSQQHTFHNE 119 L + +K + + G +A N + + QQ+ Sbjct: 296 LSMYKDPQEREKQIRNMSEGFRELADGILPELRRSRLIINYQTIGRSDDQIQQQYAADPT 355 Query: 120 YLVY--LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L LL A N + ++ A +L + GD +AQ Y Sbjct: 356 KLSLEELLYA--ASLTNDKNAKKAIYKKTTELYDRDYRAYNNLAALALNDGDEQTAQSYL 413 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR----- 232 KAL ++ AP + + A L+ + +N L IAR Sbjct: 414 EKALQVNRKAPEAFANKAYIDLTHGRIADAERHLSDATEANG-FNEVLGNLHIARGNYAN 472 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI---------CAAKSLISQNKKRKAEVIL 283 + + + A+ + + + +I A Q K A L Sbjct: 473 ASDELFNNNNSAALAQLMNKNYVAAEQTLKAIQQPNGLTYYLFAVLNARQGKNDAAGTYL 532 Query: 284 EKIWKVNP 291 + + +P Sbjct: 533 KDALQKDP 540 >gi|325107574|ref|YP_004268642.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324967842|gb|ADY58620.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 471 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 66/206 (32%), Gaps = 21/206 (10%) Query: 160 LYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L+ + + A P P+ Q A++ + + N Sbjct: 11 LFSQKRYQEALAEVGRHLAE-----QPHEPYGLALRGQILAELDRKDEALSSVYEAIANG 65 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + + A G + +E+++L + A + + Q++ + Sbjct: 66 PDND----YVHFAHGYVLLKSGKSKDAEAALLEAIRLAPDHAEHYSLLAATYLDQSRWKD 121 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI-------NKESVESLVIV 331 A + +++P E + + + +L+R +++ N E + Sbjct: 122 ALKTCDAALELDPDDERVLNFKSM----ALRRLRRKEESQQLSEEALRRNPEDPMTHANR 177 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 LE G +QA A+++ P Sbjct: 178 GWQLLEAGKHEQALEHFKEALRLDPD 203 >gi|300312352|ref|YP_003776444.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] gi|300075137|gb|ADJ64536.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] Length = 570 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 10/195 (5%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQ 148 G ++ A A + +E + L + E ++ A +++ Sbjct: 44 GSVAAAQGRFAEAALAWQQALRLLPPDSEEALALRYRLGRAFYEEGRFEDAFLLYRELIE 103 Query: 149 I----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 P A +L S + A +AL P + A++W Sbjct: 104 SGWQLPELFVAAAAALQGMSPSGKNDPQALALLEEALQRDPGQADTWHRKAALHERARQW 163 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A ++Q + + RA +A L +G + ++L L + A + Sbjct: 164 DAARQCIHQALR----LDDQRAQYWLAAGLVEHAQGQFEEALRYYDQALILAPELVDAHV 219 Query: 265 CAAKSLISQNKKRKA 279 +L + +A Sbjct: 220 SRGTTLARLRQHEEA 234 >gi|262305009|gb|ACY45097.1| acetylglucosaminyl-transferase [Lynceus sp. 'Lyn'] Length = 288 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 6/165 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + H + L L I + A L + A Sbjct: 34 GQVQDAEDCYNTALKLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 92 SNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDINGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + + D G++ + +LKL + A Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDA 192 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N K + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVQDAEDCYNTALKLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|209527528|ref|ZP_03276030.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209492016|gb|EDZ92369.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 530 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 82/254 (32%), Gaps = 14/254 (5%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y +L L ++ A + + + +E L L + ++ ++ Sbjct: 175 YMSLGQTLEAL--GETEEAIASYRRAYELNPNLSEALPKLQT--VLESQGRWEELATLYR 230 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + + L G L+ A KAL++ P+ + + + Q +W Sbjct: 231 RCCIVDPNSATSHKYLGTALANSGKLSEAAESYQKALELDPNLVEILQPLGQVLTQLNQW 290 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A+ + + + N + ++L D+ + + ++ +L S Sbjct: 291 EAAVDIFRKATQ--VDPNSASFYHQLGQALTKCDR--LSEALAAYQKASELHPTSTPVLF 346 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEE 319 + L +A +K +NP P A I THL + + E Sbjct: 347 DLGQVLTKLYHWSEAIATYQKALYLNP-PNQAEIQTHLQEVQDKQRHLDEEIAAYSESHE 405 Query: 320 INKESVESLVIVSK 333 + S ES ++ Sbjct: 406 FHPNSSESYEKFAQ 419 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 92/268 (34%), Gaps = 14/268 (5%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPAT 152 + + A + + + + LV +L+ Q+ Q+ A + Q+ Sbjct: 251 ANSGKLSEAAESYQKALEL----DPNLVEILQPLGQVLTQLNQWEAAVDIFRKATQVDP- 305 Query: 153 REFAVYSLYFESCRIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + Y ++ D + A KA ++ P + V + Q WS AI Sbjct: 306 NSASFYHQLGQALTKCDRLSEALAAYQKASELHPTSTPVLFDLGQVLTKLYHWSEAIATY 365 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + N+ + + D + + ES + NS + A+ L Sbjct: 366 QKALYLNPP-NQAEIQTHLQEVQDKQRHLDEEIAAYS--ESHEFHPNSSESYEKFAQFLR 422 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESL 328 S+ K A + + +NP +A+ YT + + + E+N S Sbjct: 423 SKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAIIAYQKAGELNPYSPHVQ 482 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + +E G +++A A ++ I P Sbjct: 483 YHLGQALVEEGRLEEAIAHFKQSITIDP 510 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 11/200 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + R G L+ A +A+ SP + W + + + AI + A E Sbjct: 10 NQLLRKGQLDEAIASYNQAIAASPKSAWYYHNLGEALSQQGKIDEAI----AAYRQATEL 65 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N N A +G++ + ++++L A LI Q +A Sbjct: 66 NPNSAWSYDNLGTLLNQQGNLPEAVRCFRQAIELDPYFWQFYHNLALVLIKQGHPEEAVS 125 Query: 282 ILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +L+K ++ + A +Y L + + + E+N + + + + Sbjct: 126 LLQKAIELTA--DDAELYHSLGKAYHQQQQYSEAVTAYRQGLELNPYWSDCYMSLGQTLE 183 Query: 337 EMGSIDQAHAKAMLAMKIAP 356 +G ++A A A ++ P Sbjct: 184 ALGETEEAIASYRRAYELNP 203 >gi|193786049|dbj|BAG50938.1| unnamed protein product [Homo sapiens] Length = 901 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 344 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 345 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 396 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 397 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 449 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 450 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 495 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 95/275 (34%), Gaps = 31/275 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 579 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 636 Query: 183 I---SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + S WV + + A + ++ +++ + L + + K Sbjct: 637 VFMKSVKLEWVQDNI----------RAAQDLCEEALRHYEDFPK----LWMMKGQIEEQK 682 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 M + + LK C +S + ++ + +A ILEK NP +P + Sbjct: 683 EMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLE 742 Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-AP 356 L + + A L +E S ++ S+ A+ + + Q K++ A+K Sbjct: 743 SVRLEYRAGLKNI--ANTLMAKALQECPNSGILWSE-AIFLEARPQRRTKSVDALKKCEH 799 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +A++ + K W + D Sbjct: 800 DPHVLLAVAKLFWSQRK-ITKAREWFHRTVKIDSD 833 >gi|27804872|gb|AAO22907.1| adventurous gliding motility protein K [Myxococcus xanthus] Length = 2516 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 13/190 (6%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + A + +H+ + N + + A Q A E + +I Sbjct: 1605 AALAVDAECRPALHALGTMYERSGNWPFALEMLSKEAELAGQSKDAVELYYRLGKINEDM 1664 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 D SA+ +AL + P A+ K+WS L Q Sbjct: 1665 LM-------------DTGSARTAYQQALAVDPGHLPSIRALKGIQEQEKDWSGYEQTLRQ 1711 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + ++ LL + D + E+LK +S+ A+ + I+ Sbjct: 1712 EAEQTEDPAAKGRALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAH 1771 Query: 274 NKKRKAEVIL 283 E +L Sbjct: 1772 EDWASGERML 1781 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 35/322 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + AR + H + L +Q E+ ++ + L + Sbjct: 1667 DTGSARTAYQQALAVDPGHLPSIRALKGIQ--EQEKDWSGYEQTLRQEAEQTEDPAAKGR 1724 Query: 159 SLYF----ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFL 211 +L + D ++A Y +AL PD+ + Y+ ++W+ + + Sbjct: 1725 ALLDVARYHAETREDRDTATGYWQEALKHIPDSLEAARPLSDVYIAHEDWASGERMLDIV 1784 Query: 212 NQKKKNAKEWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASIC 265 +K +++ + R A+K G + ++ +L + A Sbjct: 1785 TRKMAEMAVADKDSVSAADLCRQLYRLGYVAEKLGKRDKALGCYEKAYELDATYLPALEG 1844 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLK 312 L+ + A + + I + H E + +I+ L + Sbjct: 1845 YGNLLVQTRRYEGALKVFQTI--LIHHREELTDLEVVEVYWQLGDIHAALNQTDRAQ--N 1900 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQ 369 + I+ +L + + + G +++ + + ++ R ++ L L +I + Sbjct: 1901 HFEKALAIDPGHEPTLRALVALLEKQGQYEKSAELRQQLVGVLEGEARAKVCLELGRIAR 1960 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 H+ + +AL + PD Sbjct: 1961 DELHDPYMAIDAFTNALKSQPD 1982 >gi|239993639|ref|ZP_04714163.1| serine/threonine-protein kinase PksC [Alteromonas macleodii ATCC 27126] Length = 1052 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 77/251 (30%), Gaps = 37/251 (14%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 E+ D A + +PD P WV +A ++ A + + + Sbjct: 467 EALNSADTVEAI------IATTPDYPGGWVAKARNDLNT--GDYDGARQAVETLFQLSDL 518 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + R + LL R+ N D S + + + A + K Sbjct: 519 AVYWRLQGELL--RAELNEDLSLAQQSIDALVSQFPDRPDLLS---MRADIYQWAGEDAK 573 Query: 279 AEVILEKIWKVNPHP-----EIANIYTHLLSEN----TVGKLKRALRLEEINKESV-ESL 328 A + + P+ E+A +++ + T L RAL K+ ESL Sbjct: 574 AMSDYKAALALRPNNGQLWFELAR--LQIINGDIETATSDSLTRALVAFRQAKDPRGESL 631 Query: 329 VIVS--KIALEMGSIDQAHAKAMLAM-----KIAPRKEIFLLL-AQIEQANSHNTDKILY 380 V+ + L A A+ K P + L I + + + Sbjct: 632 VLNAFGIAYLRTADNVAAAQYFKDALALRDAKTQPSQRAKTLANLAIATSLTGDYATAEA 691 Query: 381 WTQSALHAMPD 391 + A+ + D Sbjct: 692 SLEEAVKLLHD 702 >gi|167647902|ref|YP_001685565.1| sulfotransferase [Caulobacter sp. K31] gi|167350332|gb|ABZ73067.1| sulfotransferase [Caulobacter sp. K31] Length = 673 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 23/266 (8%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVY 158 A + L+ + A E + ++Q P + + Sbjct: 28 AMAAEQARAILEAVPRHAGATLMLAAALRLSGDLDQALEVVDPLARALVQSPEVQL--EH 85 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L R+G +A +A + PD + + LA + + A ++ K Sbjct: 86 GLVLA--RLGQTQAAIAAFKRATALDPDLAEGWRGLAEALDLAGDAAGAQAAQARQIKAG 143 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 L+ A + G + + + L++ + A A+ + Sbjct: 144 ----VRDPALMSAAAA--LVDGKLGVAEQILRDVLRVRPDEPAAIRMLAEVAARLGRHDD 197 Query: 279 AEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 AE +L + ++ P H +Y SE+ + +L +L + L + + Sbjct: 198 AETLLVRCLELAPGFTAARHNLATVLYRQGRSEDALVELA---QLLAGAPRNPAYLNLKA 254 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358 +G QA + P++ Sbjct: 255 AALARIGEYAQAIELLEDVLARFPQQ 280 >gi|145612561|ref|XP_367288.2| hypothetical protein MGG_07213 [Magnaporthe oryzae 70-15] gi|145019705|gb|EDK03933.1| hypothetical protein MGG_07213 [Magnaporthe oryzae 70-15] Length = 933 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 12/207 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E G LN A+ +A +P+ + A V+ E A L ++NA Sbjct: 606 LAKERLLAGQLNEARLVLGRAFQQNPNNEDIWLAAVKLEADHNEIDEARRLLTVARQNAP 665 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + R L+N D A+ E+L+L + + + + +A Sbjct: 666 TDRVWMRSVAFERQLDNKD-----AALELVQEALQLFPAAPKLWMMKGQIYEDMGQVPQA 720 Query: 280 EVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEIN---KESVESLVIVSKI 334 K P P + +Y+ L E +K L+ +S E + ++ Sbjct: 721 REAYGTGVKAVPSSVP-LWLLYSRLE-ERNKNVVKARSVLDRARQAVPKSPELWCELIRV 778 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIF 361 G+ QA A++ PR + Sbjct: 779 ERRAGNTTQAKNLMATALRQMPRSGLL 805 >gi|110597763|ref|ZP_01386047.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM 13031] gi|110340670|gb|EAT59150.1| TPR repeat:Tetratricopeptide TPR_3 [Chlorobium ferrooxidans DSM 13031] Length = 537 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 57/163 (34%), Gaps = 4/163 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 E Q E +++ + ++L + G+ + A +A+ I+P Sbjct: 325 AYGREGQKQKKIEAYRQAVRLNSEYAVGWFNLAMAYVQNGETDKAIAAYQQAVRITPRDA 384 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + ++ +A+ Q + E A L++ + +Y Sbjct: 385 SAWYRLGLVFSDGGQFDKAVKAYLQAVRITPE----NANYLLSLARAYGHAAQPSEAYEA 440 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L++ + A + S + ++K +A + ++NP Sbjct: 441 YKSALRINPDYTDAWVYLGISYENDHRKEEALHAYTEALRINP 483 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 14/225 (6%) Query: 78 KRNYDKGYKALYTGLMSIAAH-NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 +R D + G +A +K+ +Y + + + + Sbjct: 310 RRRPDYAQYWVDLG---VAYGREGQKQKKIEAYRQAVRLNSEYAVGWFNLAMAYVQNGET 366 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + ++I A Y L G + A + +A+ I+P+ ++ + Sbjct: 367 DKAIAAYQQAVRITPRDASAWYRLGLVFSDGGQFDKAVKAYLQAVRITPENANYLLSLAR 426 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y A + S A + ++ L I+ ++ + + H E+L++ Sbjct: 427 AYGHAAQPSEAYEAYKSALRINPDYTDAWVYLGISYENDHRKE----EALHAYTEALRIN 482 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIY 299 + A + + K + + H PE+A ++ Sbjct: 483 PDHNTALFNLGRFYLETGSVEKGMAV----YGRLKHLNPEMAQLF 523 >gi|119944202|ref|YP_941882.1| TPR repeat-containing protein [Psychromonas ingrahamii 37] gi|119862806|gb|ABM02283.1| Tetratricopeptide TPR_2 repeat protein [Psychromonas ingrahamii 37] Length = 880 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 38/243 (15%) Query: 123 YLLEVQIALAERQYNIAHE-KLEMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL+ A AE Y A E + + Q P ++ L R A++ K Sbjct: 636 NLLKASKAFAENDYPKAKEILIAALKQEPENITLLSL--LTDIEIRSEQYIEARKITDKI 693 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAIL--------- 228 I P + T +V ++ +AI L QK K+ + ++ +L Sbjct: 694 AKILPKSSLATRLYAGIFVAQEKPQQAINLLTAYWQKTKDEQVADQLYLLLGNNNSEKAA 753 Query: 229 ----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + +++ + G + LK N +++ +A Sbjct: 754 AFLNEWQQAFPKSLTAIRYQAIYLQNNGKKEQALQVYQAQLKQTPNDVVSLNNSAWLYFE 813 Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEINKESVE--S 327 Q A + EK +K+ P + I + Y + + K ++ E S Sbjct: 814 QGNP-IAITLAEKAYKLMPENAAILDTYGWILYKNGERQQGKKLIEEAMRLSPNEPEIKS 872 Query: 328 LVI 330 ++ Sbjct: 873 HLL 875 >gi|119193220|ref|XP_001247216.1| pre-mRNA splicing factor [Coccidioides immitis RS] Length = 940 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 37/265 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R KA + +P+ + A V+ AK+ +A L ++ A Sbjct: 615 LAKEKWQAGEIDNARRVLAKAFNQNPNNEDIWLAAVKLEADAKQTDQARELLATARREAG 674 Query: 220 EWNRNRAILLIARSLENAD-----------------------------KGDMIASYHDAI 250 + R L N+D + + Sbjct: 675 TDRVWIKSVAFERQLGNSDTALDLVNQGLQLYPKADKLWMMKGQIYEVEKRYPQAREAYG 734 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 + C S+ + A++ KA IL++ P+ A ++T + E Sbjct: 735 TGTRACPKSVPLWLLASRLEEKLGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 792 Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A L +E S ++ S+ LE + + + K+ +F+ +A+ Sbjct: 793 NISQAKVLMAKGLQEVPTSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 851 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 I +K + W + A+ A D Sbjct: 852 IFWGERR-LEKAMTWFEKAIVANSD 875 >gi|89889650|ref|ZP_01201161.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] gi|89517923|gb|EAS20579.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7] Length = 459 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 79/238 (33%), Gaps = 18/238 (7%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A+ ++ A LE T + L D A+ K +++S D Sbjct: 50 ALAEKAKGNHDRAIVLLENCAAQEPTSGAVQFELAKNHLANKDFVKAELSVKKGIELSGD 109 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL--IARSLENADKGDMIA 244 W+ + + Y KE+ +A+ + Q K + L + + + I Sbjct: 110 NEWMLDMLFDIYDEQKEYDKAVPVMEQLVKINDNYEEFLPTLYYRTGQYDKALKSLNDID 169 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVI--LEKIWKVNPHPEIA---N 297 + A ++ + +SL+ Q + R I LE + NP E A Sbjct: 170 ARQGANDARRNALR---------RSLVNRQQQEVRNENNIESLEAEIERNPTNEQAYINL 220 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 IY H + + + A E S + + + KI +E ID A + Sbjct: 221 IYMHGRNGDKEALFEVAQDFERNVPNSDAAHLALYKIFIENDRIDDGVASLEKILTSD 278 >gi|15220436|ref|NP_172007.1| calcium-binding EF hand family protein [Arabidopsis thaliana] gi|75318061|sp|O23052|Y1515_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At1g05150 gi|2388582|gb|AAB71463.1| Contains similarity to Rattus O-GlcNAc transferase (gb|U76557) [Arabidopsis thaliana] gi|332189674|gb|AEE27795.1| Calcium-binding tetratricopeptide family protein [Arabidopsis thaliana] Length = 808 Score = 46.9 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + L + +W + + + +G ++++ E+ LC A Sbjct: 292 LLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLG 351 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322 +L + R A LE+ + P H ++A+ H + E+ ++ R ++ Sbjct: 352 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHSMGEDERA-IEVFQRAIDLKP 409 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++L + + +++G +A + + P L + + T++ Sbjct: 410 GHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLNKAVSLLGAGETEEAKRAL 469 Query: 383 QSALH 387 + AL Sbjct: 470 KEALK 474 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 RA+ L+ +L G+ A+ E++ L + A A SL S + +A Sbjct: 342 THFRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIE 399 Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331 + ++ + P H + + +Y L G+ +RA L + + Sbjct: 400 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLTVW-PNHWRAQLNK 452 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + L G ++A A+K+ R Sbjct: 453 AVSLLGAGETEEAKRALKEALKLTNR 478 >gi|326389037|ref|ZP_08210619.1| tetratricopeptide repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] gi|326206637|gb|EGD57472.1| tetratricopeptide repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] Length = 650 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 11/206 (5%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 V L D A +++ SPD A+ +Q VL + A Q+ + Sbjct: 67 VRGLALAGMHRLDE--AVTALRESVRRSPDNYEAWRALGEQLVLLGDSGGADFAFAQQLR 124 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + +A + + D+ + + LK I A A+ + Sbjct: 125 CQAKDPQLQA------AAVAMVRNDVPVAERLLKQFLKQHPTDIAALRMLAEVAGRIGRY 178 Query: 277 RKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 R A +LE ++ P + A L++ L + + Sbjct: 179 RDAIYLLEHALELAPSFDTARFNLATALYRFGENAKALEQLDLLLAKQPRHSSYRNLAAA 238 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKE 359 +G +D A A ++ P Sbjct: 239 ALGRIGDLDAAIAHYEYLVERHPAAS 264 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 13/213 (6%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIA 231 A+ A + L + P + A+T L + + + + + RA L Sbjct: 47 AEEQAREILAVVPASGEAHLVRGLALAGMHRLDEAVTALRESVRRSPDNYEAWRA--LGE 104 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + D G ++ + A++ + N AE +L++ K +P Sbjct: 105 QLVLLGDSGGADFAFAQQLRCQAKDPQLQAAAVAMVR-----NDVPVAERLLKQFLKQHP 159 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAK 347 +IA + +G+ + A+ L E + + ++ G +A + Sbjct: 160 T-DIAALRMLAEVAGRIGRYRDAIYLLEHALELAPSFDTARFNLATALYRFGENAKALEQ 218 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 L + PR + LA + D + Sbjct: 219 LDLLLAKQPRHSSYRNLAAAALGRIGDLDAAIA 251 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 7/173 (4%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 ++AL L+ + + A ++ Q + L +A+ +A L Sbjct: 98 AWRALGEQLVLL--GDSGGAD--FAFAQQLRCQAKDP--QLQAAAVAMVRNDVPVAERLL 151 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + L+ T A+ L + RIG A AL+++P + E Sbjct: 152 KQFLKQHPTDIAALRMLAEVAGRIGRYRDAIYLLEHALELAPSFDTARFNLATALYRFGE 211 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++A+ L+ + + + L A D IA Y +E Sbjct: 212 NAKALEQLDL-LLAKQPRHSSYRNLAAAALGRIGDLDAAIAHYEYLVERHPAA 263 >gi|158335728|ref|YP_001516900.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158305969|gb|ABW27586.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 454 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 74/234 (31%), Gaps = 24/234 (10%) Query: 116 FHNEYLVYLLEVQIALAERQ---YNIAHEKLEMML-----QIPATREFAVYSLYFESCRI 167 L L Q+A + Y+ A E L P + L + Sbjct: 81 LDRASLATLYL-QLASSTGNTHWYHEAEETARQSLANLPFNNPEAQLA----LAKVAQAE 135 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 A ++A L +P VV + + +A +Q + A + Sbjct: 136 HQFAEALQFAETVLQENPTNQQALSIVVTSKLAQGQLDQAQPVADQLVEQAPTL-----V 190 Query: 228 LLIARSLENADKGDMIASYHDAIESLKL-CDNSIM----ASICAAKSLISQNKKRKAEVI 282 R+L +G+ A+ D ++L L + + A + + + A+ Sbjct: 191 SHTLRALVLVAQGEDQAALQDFQQALALEQPDQLSQSAWARTLLGRYYAHRGQLPLAKQY 250 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 ++ ++ PH A + E G A L + + ES + +AL Sbjct: 251 YQEALQLQPHSSFARVKL-AELETRQGNYGAAETLYQQLLQHPESSHGLDHVAL 303 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 68/220 (30%), Gaps = 24/220 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G L A++Y +AL + P + + + + + A T Q ++ + + Sbjct: 241 RGQLPLAKQYYQEALQLQPHSSFARVKLAELETRQGNYGAAETLYQQLLQHPESSHGLDH 300 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L + +G + + E+ + + L +R +L Sbjct: 301 VALQGLAQLKVLEGKLTEASQLWDEAEHEFRDH--------QDLDHFGHRRDLAKLL--- 349 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + L + ++ E+L ++ + +A + Sbjct: 350 ------------LARGHQADLPEALTLMQAEANLRQD-PETLKTLAWALSRLNRYGEAQS 396 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 A+ + + A + +A+ N + + Q AL Sbjct: 397 VLQDAIALGIQDASLFYRASLVEASLGNKAQAKVYVQKAL 436 >gi|116283326|gb|AAH05987.1| IFIT2 protein [Homo sapiens] Length = 412 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H +I Y + K + + + + + ++ I Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 A A A + + +LA + E+A Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354 >gi|15673165|ref|NP_267339.1| hypothetical protein L198787 [Lactococcus lactis subsp. lactis Il1403] gi|12724149|gb|AAK05281.1|AE006350_8 hypothetical protein L198787 [Lactococcus lactis subsp. lactis Il1403] Length = 418 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 23/198 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154 + A + + + + + L + + Y+ A + + + T+ Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAI 208 S+Y RIGD + A L+ S + E + + Y +RAI Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAI 223 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + +K E+ +A + + A+ A + +K N++ A+K Sbjct: 224 ANFKRLEKMDVEFLNYE----LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASK 279 Query: 269 SLISQNKKRKAEVILEKI 286 K AE L Sbjct: 280 ICFKLKDKAAAERYLVDA 297 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 75/242 (30%), Gaps = 44/242 (18%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ L +IA + A L + A+ + GD +A +A Sbjct: 69 LINL--AEIAEDNGNLDEALNYLYQIPVNDENYIAALIKIADLYQFEGDFETAISKLEEA 126 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 ++S D+P +T A+ + Y ++S AIT K R IL + G Sbjct: 127 RELS-DSPLITFALAESYFEQGDYSAAITE-YAKL-------SERKILHETKISIYQRIG 177 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IA 296 D A LEK + + PE IA Sbjct: 178 DS---------------------------YAQLGNFENAISFLEKSLEFDEKPETLYKIA 210 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +Y +E + RLE+++ E + + ++ A A MK P Sbjct: 211 LLYGETHNETRA--IANFKRLEKMDVEFLNYELAYAQTLEANQEFKAALEMAKKGMKKNP 268 Query: 357 RK 358 Sbjct: 269 NA 270 >gi|327403299|ref|YP_004344137.1| hypothetical protein Fluta_1304 [Fluviicola taffensis DSM 16823] gi|327318807|gb|AEA43299.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola taffensis DSM 16823] Length = 329 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 9/195 (4%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-- 226 D + + KA I P + + + A ++ ++ N+ Sbjct: 56 DFDKSLHDGAKAYRIQPWNTEA-RFLYANALNNRAERTASDVMSAQQHFKFVINKQPKNL 114 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L+A + A +GD +++ + E+L++ A I +S + A+ + Sbjct: 115 AALVAIATTYAQQGDNEKAFYYSNEALRINKKYRDAYILKGSIYLSLGNTKLAKSSYQTA 174 Query: 287 WKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++ P+ Y L +E ++ + +I ++E L ++ E I Sbjct: 175 --IDQDPDFFEAYVKLGLMYQAEQDPLCIEYFITASQIRPNNIEVLYNLAYAYQEFDKIP 232 Query: 343 QAHAKAMLAMKIAPR 357 +A +K P Sbjct: 233 EAQQTYREMLKKDPS 247 >gi|237745406|ref|ZP_04575886.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS] gi|229376757|gb|EEO26848.1| TPR repeat-containing protein [Oxalobacter formigenes HOxBLS] Length = 608 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 63/299 (21%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q ++Y A ++ E +L + A+YSL S + D +A++Y Sbjct: 284 SLARLLVGQ-----KKYEQAKQEFEKLLSSDSQDLMALYSLGLLSVQQNDYRAAEKYLQS 338 Query: 180 ----ALDISPDAPWVTEAVV---------------------------------------Q 196 A + P T+ + Q Sbjct: 339 YLVAAAAQEKEKPESTQVLFLLSQIAEEQRHYDKALQWLSQINPDADDEVALGVDIKKAQ 398 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y + +A + ++ + R R LL+ + D + + + Sbjct: 399 IYARKGKVDKARKII-ADMESKNPYERER--LLLTEAQILRDAKKTREALNILQAGMAEF 455 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRA- 314 + A + + + + E L++I K++P HP Y + L + + R Sbjct: 456 PENTNILYDYALTAENLGQYAEMEKALKRIIKIDPNHP---QAY-NALGYSLADRQLRLD 511 Query: 315 ------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 + ++ + + + G +D A A ++ P EI + LA++ Sbjct: 512 EAFTLIEKALQLAPDDPFITDSLGWVLYRQGKLDLAEKNLRQAYQLRPDNEIAIHLAEV 570 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 71/219 (32%), Gaps = 19/219 (8%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + D A+ A KAL + PD+ AV+ + S A+ L+ + Sbjct: 220 LAISALLKNDSARAREEAQKALALKPDSE---MAVLTFAQASASPSVAVEVLSGFLEKYP 276 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R L + + + + + L +MA + QN R A Sbjct: 277 ASREVRVSL----ARLLVGQKKYEQAKQEFEKLLSSDSQDLMALYSLGLLSVQQNDYRAA 332 Query: 280 EVILE-----KIWKVNPHPEIANIYTHLLSENTVGKL--KRALRLEEINKE-SVESLVIV 331 E L+ + PE + L + K L +IN + E + V Sbjct: 333 EKYLQSYLVAAAAQEKEKPESTQVLFLLSQIAEEQRHYDKALQWLSQINPDADDEVALGV 392 Query: 332 ----SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 ++I G +D+A P + LLL + Sbjct: 393 DIKKAQIYARKGKVDKARKIIADMESKNPYERERLLLTE 431 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 100/334 (29%), Gaps = 86/334 (25%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 Q N+ L +L IA A E ML + + GD Sbjct: 70 QLLLTNDLLYQILSADIAEQRGLDIYA---YETMLDV--------------AKETGDPRL 112 Query: 173 AQRYATKA----------------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 A+R A A ++P + +V VL + K Sbjct: 113 ARRAAEIAVKNRNVKDALQAVRLWYRLAPQSGEAERYLVGFLVLDNRLDEVKDMFSSKLA 172 Query: 217 NAKEWNRNR-------------------AIL-------------LIARSLENADKGDMIA 244 A R A+L ++ ++ K D Sbjct: 173 AASPEQRVSLFYQLQQILAGTKDKSDAFAVLEEVLVPYQNMPEAHVSLAISALLKNDSAR 232 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIY 299 + +A ++L L +S MA + A++ S A +L + P +A + Sbjct: 233 AREEAQKALALKPDSEMAVLTFAQASAS---PSVAVEVLSGFLEKYPASREVRVSLARL- 288 Query: 300 THLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L+ + + K+ +L + + + +L + ++++ A + A + Sbjct: 289 --LVGQKKYEQAKQEFEKLLSSDSQDLMALYSLGLLSVQQNDYRAAEKYLQSYLVAAAAQ 346 Query: 359 --------EIFLLLAQIEQANSHNTDKILYWTQS 384 ++ LL+QI + H K L W Sbjct: 347 EKEKPESTQVLFLLSQIAEEQRHYD-KALQWLSQ 379 >gi|222622881|gb|EEE57013.1| hypothetical protein OsJ_06783 [Oryza sativa Japonica Group] Length = 1004 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 14/240 (5%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKAL 181 LL + E + P Y + GD++ A RY A+ Sbjct: 116 LLLGAIYYQIRNYDMCIAKNEEALAIDPN--FAECYGNMANAWKEKGDVDLAIRYYLTAI 173 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P+ + Y W + Q + A N +G Sbjct: 174 QLRPNFCDAWSNLASAYT----WKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGF 229 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +Y+ IE+L++ +A A + KA + ++ K+ P A+ Y + Sbjct: 230 IQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLK--PSFADAYLN 287 Query: 302 LLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + R + + + ++ I E G +D A A+ P Sbjct: 288 QGNVYKTMGMSQEAIISYQRAVQARPDYAMAYGNLATIYYEQGQLDIAIRCYNQAIICDP 347 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 18/188 (9%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-- 151 + A + + + L L++ Q A+ E + P Sbjct: 194 GRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQ-----GFIQEAYNCYIEALRIDPQFA 248 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L+ E+ GDL+ A Y +A+ + P Y AI Sbjct: 249 IAWSNLAGLFMEA---GDLDKALLYYKEAVKLKPSFADAYLNQGNVYKTMGMSQEAIISY 305 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + ++ A+ + ++G + + +++ + A +L Sbjct: 306 QRAVQARPDY----AMAYGNLATIYYEQGQLDIAIRCYNQAIICDPQFVEAYNNMGNALK 361 Query: 272 SQNKKRKA 279 + ++A Sbjct: 362 DAGRVKEA 369 >gi|158424856|ref|YP_001526148.1| putative Flp pilus assembly protein [Azorhizobium caulinodans ORS 571] gi|158331745|dbj|BAF89230.1| putative Flp pilus assembly protein [Azorhizobium caulinodans ORS 571] Length = 608 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 104/324 (32%), Gaps = 48/324 (14%) Query: 86 KALYTGLMSIAAHNIPL------ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 AL+ L + + L A + + +H LV E A+ Y A Sbjct: 2 NALHPSLCACGSGLRALRCCQLEASALGPAAASRHLL---PLVD--EAIACHAKGAYGEA 56 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 +L++ + A+ LY G +A+ + + + P+ W T+ + Sbjct: 57 ERLCLEVLELAPGQGGALAVLYQIRKMQGAGAAAEALVRRLVMLDPNNVWATQELALLLF 116 Query: 200 LAKEWSR----AITFL------------------NQKKKNAKEWNRNRAI---------L 228 + + A + + E++ RA+ L Sbjct: 117 GKGDLAEGEIHARNAVRIAPTDPQSHNLMGMIMTEMNRPQVGEFHYRRALDLLGQRQPIL 176 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L + ++G M S ES L + + A+ + +A+ +L++ Sbjct: 177 LANLAWNLKNQGKMAESRALYEESFALAPTILQTVLGWARMEETDRNFARADELLDQAQA 236 Query: 289 VNP-HPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSID 342 + P HP I ++ L R+ + N L+ ++ +MG D Sbjct: 237 LAPGHPSILLHRAVVRGRTKQYDAALAILDRMAQQNPGGGLGTNDLLEKGRLLDKMGRYD 296 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQ 366 +A A ++ + +A+ Sbjct: 297 EAFAAFAAGKRLNVEQSGVTYMAE 320 >gi|34558195|ref|NP_908010.1| hypothetical protein WS1901 [Wolinella succinogenes DSM 1740] gi|34483914|emb|CAE10910.1| conserved hypothetical protein [Wolinella succinogenes] Length = 351 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 22/188 (11%) Query: 58 LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 + + +F + +R ++ K + K + ++ Sbjct: 24 VIFLVTYFWNL-------RAQRRREQSLKKFSQLF------DHSSVDKDAKALFERGADF 70 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-----RIGDLNS 172 L +L + +Y+ A + ML+ T+E L ES + G L Sbjct: 71 GATLGFL--AETYSKAGEYDKAIKIYLAMLE--QTQESGEKLLLLESLGETYFKAGFLER 126 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A++ + L +P P ++Q ++ A+ L+ + ++ R + Sbjct: 127 AKKIFLEVLKNAPRNPKALFWLMQACENLGQFDEALEALDCLLELGEKSERVKFNHAYLS 186 Query: 233 SLENADKG 240 + Sbjct: 187 AKRVLADP 194 >gi|309791088|ref|ZP_07685623.1| serine/threonine protein kinase with TPR repeats [Oscillochloris trichoides DG6] gi|308226872|gb|EFO80565.1| serine/threonine protein kinase with TPR repeats [Oscillochloris trichoides DG6] Length = 858 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 14/235 (5%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A E L I A + + R A AL ++P+ P A Sbjct: 613 DYEQARSAFETALDIDPNYSEAQLGIGWGYYRQDQGTKADEAFDTALSMNPNNPNTHYAK 672 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA----- 249 + E+ AI + + + A L A E + Sbjct: 673 GRIAFDNDEYRNAINYFERANQLNPRSTYTLAWLARAYQFEGFFADNDATRKDLYAKAES 732 Query: 250 --IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSEN 306 ++L + N A+ L Q K ++ I E+ ++NP+ + Y L S Sbjct: 733 IYRQALDIRPNFAFATSGLGWVLQYQEKYEESISIFERAIELNPNDD--EAYNGLGWSLF 790 Query: 307 TVGKL----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + +L + ++ + + E+G +D+A A ++I P Sbjct: 791 NLDRLGDAETAFRQSTQLAPNYASPQYGLGRTLEELGRLDEARAAFKTTLEIDPT 845 >gi|291302798|ref|YP_003514076.1| LuxR family transcriptional regulator [Stackebrandtia nassauensis DSM 44728] gi|290572018|gb|ADD44983.1| transcriptional regulator, LuxR family [Stackebrandtia nassauensis DSM 44728] Length = 900 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 84/245 (34%), Gaps = 21/245 (8%) Query: 137 NIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 + E++ P + L + GD ++A A AL I + T V Sbjct: 475 DDLRRAHELLASEPDDNARGRLLGLMAMATYRGDADTALELARDALRIGRETGDPTVTVR 534 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--ILLIARSLENADKGDMIASYHDAIESL 253 V+ S + L + +E + +L+ ++ +A +GD S A + Sbjct: 535 GLLVVGGVTSN-LDMLTEALSITEELRDHDLEITVLMYLAMHHARQGDHGESARAARGGV 593 Query: 254 KLCDNSIMA-------SICAAKSLISQNKKRKAEVILEKIWKVNPHP---EIANI---YT 300 +A + AK+L+ +A +++ P P +I + Sbjct: 594 DRAQRLGLARSRGTHLAGHLAKALLLSGHWDEAASVVDSALAEGPPPMSRDILRAVAGHL 653 Query: 301 HLLSENTVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +L +T + A+ L E + + V + AL G ID+A A+ Sbjct: 654 AVLRGDTDTAAELAVDLESGDERLGTHLLHRHVFLCLAALSEGDIDRAEEFLSRALSNPA 713 Query: 357 RKEIF 361 + + Sbjct: 714 LRRVA 718 >gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT 9303] gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT 9303] Length = 706 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 12/158 (7%) Query: 133 ERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A + + P + + +GD A KA++I P Sbjct: 533 SGDHQGAIADYNKAIELDPQHAFAFNNRGIAKD--NLGDHQGAIADYNKAIEIDPKYASA 590 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 K++ AI N+ ++ A+ R +GD + DA Sbjct: 591 YNNRGYAKSDLKDYQGAIADFNKAIAINPQY----ALAYTNRGWFKYLQGDFQDALKDAN 646 Query: 251 ESLKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKI 286 ++L + N + + L + R A L++ Sbjct: 647 KALAITPN--DGATLDTRGLAKHALGQDRSACKDLKRA 682 >gi|71022665|ref|XP_761562.1| hypothetical protein UM05415.1 [Ustilago maydis 521] gi|46101431|gb|EAK86664.1| hypothetical protein UM05415.1 [Ustilago maydis 521] Length = 558 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 80/253 (31%), Gaps = 31/253 (12%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIG 168 + L+ +I LA+ A + + P Sbjct: 234 ADALRADSSNPEALLVRARILLAKGDTAKAIAHCQAALRSDPE----------------- 276 Query: 169 DLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + A+ K + + + ++ A+ + +A Sbjct: 277 -QSGARDLLKKCRRLEAKKEEGNTSFKKGDNLAAVRSYTEALEIAGDNSQRDGPAQGFKA 335 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 IL R+ N+ KGD A+ D +L+L + A A++L++ K A + Sbjct: 336 ILYSNRATANSKKGDHKAAIADCDAALQLDPGYVKALRTRARALLATEKYEDAVRDFKSA 395 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVSKIALEMGSIDQAH 345 + A++ +E +L+ A L+ K+ ++ V+K + D Sbjct: 396 LQE------ASVSGGREAEQLQRELRSAEIDLKRSKKKDYYKILNVAK---DASDSDIKK 446 Query: 346 AKAMLAMKIAPRK 358 A ++K P K Sbjct: 447 AYRKESLKHHPDK 459 >gi|302036314|ref|YP_003796636.1| hypothetical protein NIDE0948 [Candidatus Nitrospira defluvii] gi|300604378|emb|CBK40710.1| protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 424 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 8/150 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A + L + R +L+ ++GD + A AL P + Sbjct: 73 TQARQALHLEPDAQEPRLTLGRTLF----QLGDTDGAIDEYRTALRFHPTVAQAHLDLGT 128 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + ++W A+T L + + + + + +G++ ++ E+L+L Sbjct: 129 ALMAKQDWRNAMTELQEAVRLDPTLVQ----AHYSMGTIHYTRGNVQSAIKAYQEALRLK 184 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI 286 + A L + + A LE Sbjct: 185 ADFAEAHYRLGLVLKVAGRDKDAAQELESA 214 >gi|262304993|gb|ACY45089.1| acetylglucosaminyl-transferase [Hanseniella sp. 'Han2'] Length = 290 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVAEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYTEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 56/181 (30%), Gaps = 13/181 (7%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL++ A + ++ + H + L L I + A L + Sbjct: 33 KGLVA-------EAEECYNTALRLCPTHADSLNNL--ANIKREQGYTEEATRLYLKALDV 83 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A +L + G LN A + +A+ I P + ++ A+ Sbjct: 84 FPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQ 143 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + A + + D G++ + +LKL + A A Sbjct: 144 CYTRAIQINPGF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHC 199 Query: 270 L 270 L Sbjct: 200 L 200 >gi|152969830|ref|YP_001334939.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894338|ref|YP_002919072.1| tetratricopeptide repeat protein [Klebsiella pneumoniae NTUH-K2044] gi|262042993|ref|ZP_06016137.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|150954679|gb|ABR76709.1| putative heat shock protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546654|dbj|BAH63005.1| putative heat shock protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259039710|gb|EEW40837.1| tetratricopeptide repeat protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 389 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 37/192 (19%) Query: 98 HNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + S T+ L + +A Y+ A + + ++ R Sbjct: 83 GEVDRAIRIHQSLMESASLTYDQRLLAVQQLGRDYMAAGLYDRAEDMFKQLVDETDFRLG 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + ++Q Y +W AI + Sbjct: 143 AL----------------------------------QQLLQIYQATSDWQSAIEVAERLV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE +R A +L+ D+ + + NS SI + + + Sbjct: 169 KLGKEKHRGEIANFWCELALQQMAANDLDKAMALLRKGAAADRNSARVSIMMGRVWMEKG 228 Query: 275 KKRKAEVILEKI 286 KA LE++ Sbjct: 229 DYAKAVESLERV 240 >gi|283779948|ref|YP_003370703.1| hypothetical protein Psta_2170 [Pirellula staleyi DSM 6068] gi|283438401|gb|ADB16843.1| Tetratricopeptide TPR_2 repeat protein [Pirellula staleyi DSM 6068] Length = 438 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 11/165 (6%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + +A + ++G + ++LK+ + + A+ Q + KA + K Sbjct: 126 VYVAAARLLENQGKFEEAQAQYDKALKVSPKDLNTLVSLARMYDRQGQSAKAVELYRKA- 184 Query: 288 KVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + HPE Y L ++ + + E+ +V+ ++ + +E G D Sbjct: 185 -IAAHPESGMAYNDLGLCYARQKDLPQSMANLHKAVELQPANVKYRNNLATVQVEAGRAD 243 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 +A P+ + + + + + A+ Sbjct: 244 EAIKTLSAV---NPQAVAHYNVGYLLEQKGNAQGAAQH-MARAVE 284 >gi|239907744|ref|YP_002954485.1| hypothetical protein DMR_31080 [Desulfovibrio magneticus RS-1] gi|239797610|dbj|BAH76599.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 785 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 9/191 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTE 192 + A + L I + + G L A + +L I+PD P Sbjct: 96 GRTEEAMACFDRALDIDP-EAVGARNNRGNALESQGQLEEACQEYEASLAIAPDQPRTLY 154 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + A+ ++ A L + G + A + Sbjct: 155 NLANTLYALGRPAEAVPRYQAALALCPDY----AYALANCGVALTALGRAAEAEDYARRA 210 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVG 309 L+L + A I A +LI++ A ++E + P PE+ ++ G Sbjct: 211 LRLEPGLVEARILLANTLIARGYPADALTVVEAGLDLTPGPELRRLFVACLRGQPAPAAG 270 Query: 310 KLKRALRLEEI 320 +R L + Sbjct: 271 TPRRERLLAAL 281 >gi|189424871|ref|YP_001952048.1| hypothetical protein Glov_1812 [Geobacter lovleyi SZ] gi|189421130|gb|ACD95528.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 406 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 17/149 (11%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A + +L T GD ++A +AL +SPD V Sbjct: 34 QAAGDR---IVRYNQLLLKADTAYL-----------SGDYSTAISAYQEALRLSPDNQLV 79 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + + Y A E A+ K + A + + +G++ A+ + Sbjct: 80 YQKLGEAYFSAGEDEEALATFKTYLK---KSTSTSARIHYVSGVLLERQGNIDAALDEYN 136 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ + A A I + + +KA Sbjct: 137 AAMAIDPIHSGARRRRADIYIIRGEFKKA 165 >gi|86159730|ref|YP_466515.1| hypothetical protein Adeh_3311 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776241|gb|ABC83078.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 4074 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 14/159 (8%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R GD SA +ALD+ P + A ++ A+ L + A + Sbjct: 330 RFGDAESALAALRRALDLDPACETAALQAFEHEFDAGRFAEALEVLERHLAAAPAKPAHA 389 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + + A +L GD + +L+ A++ A L + + +LE Sbjct: 390 PLRVRAAALAREKLGDPARARRHLEAALRADPGHAAAAVALAPLLAEAGEWQPLARVLE- 448 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 + + +++ RL EI +E Sbjct: 449 -------------LSARRERSPGERVRLLERLAEIQQEH 474 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 1/131 (0%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ + L + P P A+V+ +W+ L ++ E A+ L Sbjct: 48 AEDLYRQLLQLEPAHPVALRALVELLEERGDWAGIAAALEREATATAEPVAAAAVTLRLA 107 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ G + + +L + A A + + + +A+ +L+ Sbjct: 108 KVQEERLGRRDRAALLYARAHRLDPSLEEARARALECFGALRRFAQAKRLLDGARDAGAE 167 Query: 293 P-EIANIYTHL 302 P +A Y L Sbjct: 168 PRALAAEYARL 178 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 8/235 (3%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATR 153 +A A V E LV L++ A A+ + A + + ++P R Sbjct: 2080 LAHGEPARAAAAWQKVLDLAPDDREALVGLIDALEAGADPEALAQALRRGLAVEELPEGR 2139 Query: 154 EFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + L + R+GD A + + L++SPD + + V A+ W L Sbjct: 2140 AHLLRRLAAVQDERLGDAAGAIQSLKRLLELSPDDREALARLDRLCVKAERWVDLGDVLA 2199 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAAKS 269 ++ A E + ++ + L + D + E L+ + A Sbjct: 2200 REIAAAAEAGDANVLGVLRQRLAELKEHRLLDREGALELYEEVLRARPDHPEALARLEAM 2259 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLEEIN 321 L +A V LE+ + P + + + L L E+ Sbjct: 2260 LQKDPGNARAAVALERAYAAAGDPLRQAAVLEQRAGERPDPQERKALYLALAELR 2314 Score = 37.6 bits (86), Expect = 5.3, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 41/134 (30%), Gaps = 7/134 (5%) Query: 160 LYFESCR-----IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 LY E+ R D SA RY +AL +P + YV W+ A L Sbjct: 3312 LYTEAARVYQEERDDRESAVRYYEEALKRTPGHLDAARPLSDIYVAQARWADAERVLAVI 3371 Query: 215 KKNAKEWNRNRAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 R + + G + + + +L + A L+ Sbjct: 3372 VGVLDSAGDARELCRQCYRQGYVAEKLGRLDKALASYRRAYELDATYLPALEGLGNLLVR 3431 Query: 273 QNKKRKAEVILEKI 286 + + +A I + Sbjct: 3432 REEWDEALRIFTAV 3445 >gi|113474024|ref|YP_720085.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101] gi|110165072|gb|ABG49612.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101] Length = 892 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 19/189 (10%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YL + E ++ A + + ++ +L I A A+ Sbjct: 6 TYLKHGKNYSDEGKWEEAIFYYKKLTELQPNNWEVYQNLGNALLEIESWQDAVTAYRHAI 65 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-----------KKNAKEWNRN----RA 226 ++P+ + + + + ++W AI + +K + + R Sbjct: 66 QLNPNLDFSHYQLGEALIKLEQWQEAIAAYQRALELNSNLPNIYQKLGDAFQQKITTDRI 125 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L E D I Y+ A+E L N + A +L + + +A +++ Sbjct: 126 AILNTYRQEIQQNPDNIQIYNRALE---LQPNDVEFCFGLANALAKKGEINQAINTYKRV 182 Query: 287 WKVNP-HPE 294 ++ P HPE Sbjct: 183 LRLQPTHPE 191 >gi|289627640|ref|ZP_06460594.1| cellulose synthase operon protein C [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 1104 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 60/295 (20%) Query: 102 LARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKL-EMMLQIPA---TREFA 156 A + ++ N L L + + A+ Q A L + + P R Sbjct: 334 RATRHPGGARWKNALENVQLWTSLQQARDLQAKGQTGKAQALLAQAQRENPDNIDVRLT- 392 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213 L + G L++AQ + L P ++ + A+ L+ Sbjct: 393 ---LADVQVQAGQLDAAQAGYRQVLASQRGNPQAIRGLINVLAQRGQADEALRLLDTLSP 449 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + R +A+ + +GD+ A+ +++K +++ A+ + Sbjct: 450 GEQAKLGDSGRFKALRSTQVARLAEQRGDVRAAQTALKDAVKSDPDNVWTRFDLARLYLK 509 Query: 273 QNKKRKAEVILEKIWKVNP----------------------------------HPEIANI 298 ++ KA V+++++ K P P++ + Sbjct: 510 TDEAPKARVLIDELLKAQPNNIDALYTSALLSVEMGQWQDAQTTFARIPVDQRTPDMKAL 569 Query: 299 YTHL-------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + L RL+ + S E + ++ ++ Sbjct: 570 ADEITMTVQINLAIGIARRGQRQEALALLDRLQPVASGSPERQLTLANAYIDADE 624 >gi|239814618|ref|YP_002943528.1| tetratricopeptide repeat protein [Variovorax paradoxus S110] gi|239801195|gb|ACS18262.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 392 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 6/157 (3%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +Y A E +L RE A ++L + R G L+ A+ K L+ + Sbjct: 85 GEYQRAVRVHEHLLGRGDLSRSDRERAQHALAQDFLRAGLLDRAEAALQK-LEGTRYENE 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +++ Y ++EW++A + + + ++ RA L ++ E GD+ A+ Sbjct: 144 ARLSLLAIYERSREWAQAAAVAQKLDESDQASYSTRRAHHLCEQASEQVAAGDLAAAGRL 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 E++ L + +I +A + KA L Sbjct: 204 LSEAVALAPQAPRPAIDSATLQLRNGDGAKAFDTLVA 240 >gi|90022461|ref|YP_528288.1| hypothetical protein Sde_2819 [Saccharophagus degradans 2-40] gi|89952061|gb|ABD82076.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40] Length = 471 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 82/236 (34%), Gaps = 25/236 (10%) Query: 137 NIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + A LE MLQ T + + + A AL + + + Sbjct: 225 DQAQALLEGMLQANPKDTNLWLQRG--QIALKQQRPQQALSSLETALVLGENNADNIATL 282 Query: 195 VQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Q ++ + +RA+T L K N+ I + L + +A+ A++ Sbjct: 283 AQLHIQSGSANRAVTLLANNITKMVANNNKIEVIDQVCAWLAYQQQWQQLANLTQALQKN 342 Query: 254 KLCDNSIMA------SICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSE 305 I A ++ AA+ S K + A +LE+ +P + + L S+ Sbjct: 343 TNN---IPAHYRSRFAVYAAQVAQSNGKTKHATKLLEEAVNNDPSNGEALLTLANILRSQ 399 Query: 306 NTVGKLK----RALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIAP 356 + RA L + E ++ +++ ++ + +A L ++ P Sbjct: 400 QRTQRANLYYIRAEALA----DYKERALLGRAQLEIDANNYPEALRLLRLVAQLNP 451 >gi|303312257|ref|XP_003066140.1| pre-mRNA-splicing factor prp1, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105802|gb|EER23995.1| pre-mRNA-splicing factor prp1, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040137|gb|EFW22071.1| pre-mRNA splicing factor [Coccidioides posadasii str. Silveira] Length = 940 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 37/265 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R KA + +P+ + A V+ AK+ +A L ++ A Sbjct: 615 LAREKWQAGEIDNARRVLAKAFNQNPNNEDIWLAAVKLEADAKQTDQARELLATARREAG 674 Query: 220 EWNRNRAILLIARSLENAD-----------------------------KGDMIASYHDAI 250 + R L N+D + + Sbjct: 675 TDRVWIKSVAFERQLGNSDTALDLVNQGLQLYPKADKLWMMKGQIYEVEKRYPQAREAYG 734 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 + C S+ + A++ KA IL++ P+ A ++T + E Sbjct: 735 TGTRACPKSVPLWLLASRLEEKLGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 792 Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A L +E S ++ S+ LE + + + K+ +F+ +A+ Sbjct: 793 NISQAKVLMAKGLQEVPTSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 851 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 I +K + W + A+ A D Sbjct: 852 IFWGERR-LEKAMTWFEKAIVANSD 875 >gi|242776072|ref|XP_002478770.1| heat shock protein (Sti1), putative [Talaromyces stipitatus ATCC 10500] gi|218722389|gb|EED21807.1| heat shock protein (Sti1), putative [Talaromyces stipitatus ATCC 10500] Length = 577 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 12/158 (7%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A E L T + ++ + A+ A K ISP+ Sbjct: 337 AYEKLGDLTQAIEYYNRSLTEHRTADVL--------TKLRAVEKAKIKAEKDAYISPEEA 388 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + Q+ +W A+ + K A + R R+ + D Sbjct: 389 EKARELGQKKFQEADWPGAVDAFTEMTKRAPDDPRG----FSNRAAALIKLMAFPQAVQD 444 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 E++K + I A I A++L + + KA L + Sbjct: 445 CDEAIKRDASFIRAYIRKAQALQAMKEYSKALDALTEA 482 >gi|197285948|ref|YP_002151820.1| cellulose synthase protein [Proteus mirabilis HI4320] gi|194683435|emb|CAR44197.1| cellulose synthase protein [Proteus mirabilis HI4320] Length = 1091 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 63/382 (16%) Query: 55 WILLFAVSRFFLSCP-AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 W LL L+ + + YK + +I LA +H + Sbjct: 278 WHLLAKADEALLNQEYSTAKRYFTQVRQLSPYK--SEAYI--GLGDIELA--LHQLEQAE 331 Query: 114 HTFHNE------------YLVYLLEVQIALAERQYNI--AHEKLEMMLQIPATREFAVYS 159 + L L Q Q+ ++ + + Q Y Sbjct: 332 RYYQQALQYQPNDAATLHSLTKLYRQQSHQKAAQFMANLTSQQYKNLAQD--------YG 383 Query: 160 LYFESCRIG---DLNSAQRY-----ATKALDIS-PDAPWVTEAVVQQYVLAKEWSRAITF 210 + D Q Y KA+ + PD W + ++ ++ A + Sbjct: 384 YIISGIQQDLAADDEQQQHYLSAIEKRKAIAKAYPDEVWNIYRLADDLLITQQPQLAEDY 443 Query: 211 LNQ-KKKNAKEWNRNRAILL----IARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 NQ ++ + +R A L R+ + + I + L I Sbjct: 444 FNQLNQRRPNDPSRRYAYALYLNKTGRAQQALNTLKTIPLSQRSESMNALDSQLRFGQIM 503 Query: 266 A-AKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRL 317 A A+SL N++++A L + P PE + + + L + Sbjct: 504 AHAQSLREHNQQQQAVEYL---FTHIP-PEQKIESYLLLAQWAE-EDDQLNQALNYYHTV 558 Query: 318 EEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQANSH 373 + + E+ ++ + +I+L IDQA +++P K LA E+ + Sbjct: 559 LNLAPNN-ETALLGATEISLAQHQIDQARYYLAQIEQLSPEKFNHYSLRRLANAEKTAGN 617 Query: 374 NTDKILY--WTQSALHAMPDPL 393 Y + + PD Sbjct: 618 IDKAKHYFIYLARQVDKEPDSA 639 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 81/290 (27%), Gaps = 43/290 (14%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALA 132 L L LA K + + + +LL + AL Sbjct: 238 RYSRANQRAPAIYYLSQAL--------TLAPKHNDSDLWRTLLQSNQYWHLLAKADEALL 289 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 ++Y+ A + Q+ + A L + L A+RY +AL P+ Sbjct: 290 NQEYSTAKRYFTQVRQLSPYKSEAYIGLGDIELALHQLEQAERYYQQALQYQPNDAATLH 349 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ + Y A N + K ++ ++ + A + Y AIE Sbjct: 350 SLTKLYRQQSHQKAAQFMANLTSQQYKNLAQDYGYIISGIQQDLAADDEQQQHYLSAIEK 409 Query: 253 LKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 K AK+ + N R A+ +L P++A Y Sbjct: 410 RKA----------IAKAYPDEVWNIYRLADDLLIT-----QQPQLAEDY----------- 443 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 +L + + L + +A I + Sbjct: 444 ---FNQLNQRRPNDPSRRYAYA---LYLNKTGRAQQALNTLKTIPLSQRS 487 >gi|323527669|ref|YP_004229822.1| tetratricopeptide repeat-containing protein [Burkholderia sp. CCGE1001] gi|323384671|gb|ADX56762.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp. CCGE1001] Length = 602 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 68/203 (33%), Gaps = 15/203 (7%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + G L++A + L + P + + + A T ++Q K+ Sbjct: 28 LHAHQAGRLDTADSLYREILALDPANARALHYFGVLHYQRGQHATAATLMSQALKH---- 83 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R+ A R L A G + + ++L+L + A +L +Q A Sbjct: 84 DRHDAACWSNRGLAAAALGRLDEATICYDQALQLQPDFADARNNFGVALQAQGALDDAIE 143 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVESLVIVSKI 334 NP A + HL +GKL R L ++ S E+ Sbjct: 144 QYRLAIASNP----ALVDAHLNLGTALGKLGRFAEALACYRDALRLDPTSAEAHFNAGNA 199 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 G + A A A+ + P Sbjct: 200 HNAQGEHEAAVASFERALALRPD 222 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 71/244 (29%), Gaps = 21/244 (8%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--A 187 A + + A +L + A++ + G +A ++AL A Sbjct: 30 AHQAGRLDTADSLYREILALDPANARALHYFGVLHYQRGQHATAATLMSQALKHDRHDAA 89 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W + A +Q + ++ R +A + + Sbjct: 90 CWSNRGL--AAAALGRLDEATICYDQALQLQPDFADARNNFGVALQAQ--------GALD 139 Query: 248 DAIESLKLC----DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYT 300 DAIE +L + A + +L + +A +++P A Sbjct: 140 DAIEQYRLAIASNPALVDAHLNLGTALGKLGRFAEALACYRDALRLDPTSAEAHFNAGNA 199 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK--AMLAMKIAPRK 358 H + R + + E+ V + + G A A +A+K P Sbjct: 200 HNAQGEHEAAVASFERALALRPDYAEAHVNLGSAIGKRGDYAGAEAHYRRAVALKANPTN 259 Query: 359 EIFL 362 + L Sbjct: 260 LVCL 263 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 19/176 (10%), Positives = 47/176 (26%), Gaps = 5/176 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A L++ T A ++ G+ +A +AL + PD Sbjct: 170 GRFAEALACYRDALRLDPTSAEAHFNAGNAHNAQGEHEAAVASFERALALRPDYAEAHVN 229 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + +++ A + + + D+ + E+L Sbjct: 230 LGSAIGKRGDYAGAEAHYRRAVALKANPTNLVCLGGSLGAQGRLDEEE-----KFYREAL 284 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 A A L+ + + W+ + + +A + Sbjct: 285 AQDPGYADAHQNLAWLLLKRGDYTEGWAEFALRWRKSDYDALAVAGVAEWRGEPLD 340 >gi|194390796|dbj|BAG62157.1| unnamed protein product [Homo sapiens] Length = 472 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H +I Y + K + + + + + ++ I Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 A A A + + +LA + E+A Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354 >gi|149925768|ref|ZP_01914032.1| hypothetical protein LMED105_06072 [Limnobacter sp. MED105] gi|149825885|gb|EDM85093.1| hypothetical protein LMED105_06072 [Limnobacter sp. MED105] Length = 592 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 94/299 (31%), Gaps = 68/299 (22%) Query: 88 LYTGLMSIAAHNIPLARKMHS------YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 L TG ++ A A++ S + L LL +IA A Sbjct: 19 LTTGCATVPADQGEPAQQQMSDEQKAYEARVADMVKQDPLFALLTAEIASQRGDTYSATL 78 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + E A ++ S G L+ A A ++SP + +++ + Sbjct: 79 AYTEAAKQQRNPELAKRAVEI-SLAEGQLDLALNAAQVWSELSPGDKQASRSIMLLQLGT 137 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 A+ L +A L ++ E A+ G +S Sbjct: 138 NRVDEAMPAL-------------KAFLADVQAAETANPGLGGSSTEKV------------ 172 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A +L++I P+ Y + L N Sbjct: 173 -----------------ALDMLQRI------PDKNKAYQTGIE------------LFGNN 197 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQANSHNTDKIL 379 + +E+ +++++A QA ++ +P++ ++L+AQ +E+ + + + Sbjct: 198 ADDLETQTLLAQLANNSELYPQAVGHMENVLRKSPQERFYVLMAQFMEKRDGNLDAAMQ 256 >gi|83644566|ref|YP_433001.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396] gi|83632609|gb|ABC28576.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396] Length = 592 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 77/211 (36%), Gaps = 23/211 (10%) Query: 127 VQIALA---ERQYNIAHEKLEMMLQIPATREFAV----YSLYFESCRIGDLNSAQRYATK 179 + A + + A + ++ + +L E + DL++A +++ + Sbjct: 378 ARSAYLLIRSGRQSEAEAAFTEARENLPSQASQLWELQINLMLE---LDDLDAALKFSNQ 434 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A++ P+ ++ + K+ + + ++ + + A+ L A AD+ Sbjct: 435 AVEEYPEDL----QLLYARAMLKDRMGLLQGMEDDLRHIIALDPDNAVALNALGYTLADR 490 Query: 240 GD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN- 297 + +Y+ ++L+L + L K +A L++ + P PE+A+ Sbjct: 491 TERTQEAYNLINKALELDPGNPAILDSMGWVLFRLGKSGEAVGFLQEAYSKFPDPEVASH 550 Query: 298 ----IYTHLLSENTVGKLKRALRLEEINKES 324 +++ ++ + L + Sbjct: 551 LGEVLWSLGRQDDAKNIWR--EAL-NTKPDH 578 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 94/321 (29%), Gaps = 45/321 (14%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV- 157 + LA + F L+ LL +IA Q ++ + + + TR+ V Sbjct: 49 DTELAPAPDAQSPYPQQFSRSTLLDLLTAEIAGQRGQVDMLLQNYLKVAR--ETRDIGVI 106 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-- 215 + I D + ++ PD + Q + K++ A++ + Q Sbjct: 107 RRALNAAQYIKDDAAMTEMTLLWTEVEPDNVDAHQLAAFQLIKQKQYPEALSHMEQVLEL 166 Query: 216 ----------------------------KNAKEWNRNRAILLIARSLENADKGDMIASYH 247 K E + L+ ++ G A+ Sbjct: 167 EGPTTFDRLAVHAKNLTDEEKKELLNLYKKILERHPENGELMYGYAVLQEINGMEEAALA 226 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTH--L 302 LK ++ A+ L S + L+K + HP+ + +Y + Sbjct: 227 STDPLLKTSPDNPAVIALRARLLKSVKGVDVSLAYLKKQYAK--HPDEVQVGALYARTQI 284 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE 359 + N L + + + ++LE I +A +K Sbjct: 285 EAHNFDAAQSIYKELMNRFPNTPHLKLSYALVSLENQHIQEARKHLEELVKQGQHLNEAH 344 Query: 360 IFLLLAQIEQANSHNTDKILY 380 + LA+I D I + Sbjct: 345 FY--LARIADQEDRVEDAIQH 363 >gi|332526321|ref|ZP_08402449.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2] gi|332110459|gb|EGJ10782.1| TPR repeat-containing protein [Rubrivivax benzoatilyticus JA2] Length = 925 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 81/270 (30%), Gaps = 10/270 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 + + + + + L +LL +I A ++ AV Sbjct: 452 GQVDAALAATGRLEKKMQGQPLPHLLRGRILGQRGDAPGARAAYTRAAELDPAYFPAVAG 511 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L A + + P A+ + A + A Sbjct: 512 LAAIDFAENKPQEAIKRFEALREQDPRDYRALLAIADLKQRTG--AGA-AEVGGLLAAAV 568 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + N A + GD A+ A E++ + + + ++ ++A Sbjct: 569 KANPGEAAPRLVLVEHFLGLGDHKAALTAANEAVAAVPDDVRLLDALGVAQLAVGDTQQA 628 Query: 280 EVILEKIWKVNPH---PE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 K+ P P+ +A+ Y + + + ++ R + E + + + ++ Sbjct: 629 LATFGKVAAAQPELPGPQMRMADTYVAMKNPDAA--MQALRRALKAAPEHLPAQQRLVQV 686 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 AL D+A A + PR+ LL Sbjct: 687 ALASQHYDEALQVAREVGRQRPREAAGPLL 716 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 78/244 (31%), Gaps = 11/244 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A L+ A +L D+ + + P P Sbjct: 215 GDNDGAMAAFRSALEAEPRHLPAYAALVPLLLERSDVEGLRAMVAAMKKVLPQHPDTRYY 274 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Q +L + RA + Q K A R +L +A ++E +G ++ + ++ Sbjct: 275 DAQVALLDGDVKRARDGVQQLLKLAPTSVR---LLQLAGAIE-FREGRLLLAESFLNRAI 330 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVG 309 + A A++ + + KA ++ + P P+ A +L S + Sbjct: 331 QQEPRLGTARRLLAQTHLRAGQPAKALQAIKPV-LEGPRPDAPSLAAAAEAYLQSGDMAT 389 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQI 367 + R I+ + ++ + G D A+ P ++ L+ A++ Sbjct: 390 AERYFKRAAAIDPRDPKVSTALALTQIAKGQTDDGFAQLEHIATQDPGNYADLALISARL 449 Query: 368 EQAN 371 Sbjct: 450 RVGQ 453 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 87/268 (32%), Gaps = 60/268 (22%) Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R +L+ GD+ +AQ KA D+ W AV+ +A+ Sbjct: 64 EARFLLGRTLF----ESGDMAAAQIELGKAHDLR----WDDNAVLPLLA------KAMVA 109 Query: 211 LNQKKKNAKEWNRNR-------AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + K+ A + R A L +L +A GD S ++L+L +I A Sbjct: 110 RGEAKQVADLYGRFELGDRVAGAELRAQVALAHAALGDSDRSQAAVDQALRLDPKNITAR 169 Query: 264 ICAAKSLISQNKKRK-----------------------------------AEVILEKIWK 288 + A+ L R+ A + Sbjct: 170 LQEARLLTRTESPRQTLERVDGILADAPGNANAWLLKGNVLRWSLGDNDGAMAAFRSALE 229 Query: 289 VNPH--PEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P P A + LL + V L+ ++++ + ++ +++AL G + +A Sbjct: 230 AEPRHLPAYAALVPLLLERSDVEGLRAMVAAMKKVLPQHPDTRYYDAQVALLDGDVKRAR 289 Query: 346 AKAMLAMKIAPRK-EIFLLLAQIEQANS 372 +K+AP + L IE Sbjct: 290 DGVQQLLKLAPTSVRLLQLAGAIEFREG 317 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 39/302 (12%), Positives = 87/302 (28%), Gaps = 37/302 (12%) Query: 91 GLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+ +A + A + Q + +A + + A + L L+ Sbjct: 616 GVAQLAVGDTQQALATFGKVAAAQPELPGPQMR---MADTYVAMKNPDAAMQALRRALKA 672 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A L + + A + A + P + K+W A+ Sbjct: 673 APEHLPAQQRLVQVALASQHYDEALQVAREVGRQRPREAAGPLLESEVLSAQKQWPAALA 732 Query: 210 ---FLNQKKKNAKEWNRNRAILLIA--------------------------RSLENADKG 240 Q++ R A+L +A D+G Sbjct: 733 ATRVALQRQPATAVAVRQHALLSLAGRQAEAERFAAAWETEHPKDADFQNHLGGAALDRG 792 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANI 298 + + + L N +A A ++ Q K A + E+ ++ P + + Sbjct: 793 QFAQAEARFRKVIALRPNDAVAHNNVAWLMVRQGKPG-AVAVAERALQLAPGNASVLDTL 851 Query: 299 YTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L ++ + + ++ E + ++++ + G A A+ K+ P Sbjct: 852 AGALAADKQLPRAVQTQREAVAKAPEVPNYRLGLARLLMANGDKAAARAELESLAKLGPS 911 Query: 358 KE 359 Sbjct: 912 FR 913 >gi|307197750|gb|EFN78899.1| RNA polymerase-associated protein CTR9-like protein [Harpegnathos saltator] Length = 1015 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 87/267 (32%), Gaps = 13/267 (4%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + + + V L + A E L Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224 Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 Q+ A+ L + + + +KA I P V + + K++ Sbjct: 225 QLDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 284 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263 ++ + L + E RA + +GD ++ ++ + ++ Sbjct: 285 NK-VQHLALHAFHNTENESMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 343 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317 + + + A EK+ K P + ++Y + S++ K ++ Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403 Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344 E + VE+ + +++I LE ++ A Sbjct: 404 TEQFPDDVEAWIELAQI-LEQSDLNAA 429 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 86/249 (34%), Gaps = 31/249 (12%) Query: 137 NIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 + A + + +L+ P + + L + G + A + AL I+ + P + Sbjct: 513 DRAEKLYKDILKEHPNYMDCYLR-LGCMARDKGQIYEASDWFKDALRINNEHPDAWSLLG 571 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA---------RSLENA-DKGDMIAS 245 ++ EW + KN +++ + + +K + Sbjct: 572 NLHLAKMEWGPGQKKFERILKNPSTSTDAYSLIALGNIWLQTLHQSGKDKEREKRHQDRA 631 Query: 246 YHDAIESLKLCDNSIMA-----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEI 295 + L+ +I A ++ A K +++ + R+A +W I Sbjct: 632 LAMYKQVLRNDPKNIWAANGIGAVLAHKGCVNEARDIFAQVREATAEFCDVWLN-----I 686 Query: 296 ANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 A+IY + ++ + + VE L + + + G + +A + A + Sbjct: 687 AHIYVEQKQFVSAIQMYENCLRKFYRYH--HVEVLQYLGRAYFKAGKLKEAKLTLLKARR 744 Query: 354 IAPRKEIFL 362 +AP+ + L Sbjct: 745 VAPQDTVLL 753 >gi|299135312|ref|ZP_07028503.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] gi|298590289|gb|EFI50493.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] Length = 700 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 80/235 (34%), Gaps = 12/235 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A L+I ++ +L G + A +A+ + P + V Sbjct: 21 GDLANADRYFRATLKIVPAHGPSLANLAAVLVHQGHFEEGRERAEQAVAVGPPSADVLNT 80 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + +S AI + K + + A L +L + D + +D + L Sbjct: 81 LGFALGRLGRYSEAIKVTDDALK--IDPSSIDAQLTRGNALRRLCRFDEALAVYDRL--L 136 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS------ENT 307 S A++ A +L + +A I E++ N P++A+ + L + ++ Sbjct: 137 SADPQSEDAALGRATALAQAQRFDEAFPIFERLLSQN--PKLASAWAGLGNALVSSHKSY 194 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + R EI+ ++ L M ++A A+ + P + Sbjct: 195 AEAVSAFDRAIEISPGLADAWAGRGGAFLAMKDFERALPNFERALSLDPHQRFLR 249 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 16/218 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GDL +A RY L I P + V + Q Sbjct: 18 LDRGDLANADRYFRATLKIVPAHGPSLANLAAVLVHQGHFEEGRERAEQAVAVGPP--SA 75 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + +L G + ++LK+ +SI A + +L + +A + + Sbjct: 76 DVLNTLGFALGRL--GRYSEAIKVTDDALKIDPSSIDAQLTRGNALRRLCRFDEALAVYD 133 Query: 285 KIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS- 340 ++ +P E + ++ RL N + + + + Sbjct: 134 RLLSADPQSEDAALGRATALAQAQRFDEAFPIFERLLSQNPKLASAWAGLGNALVSSHKS 193 Query: 341 IDQAHAKAMLAMKIAP--------RKEIFLLLAQIEQA 370 +A + A++I+P R FL + E+A Sbjct: 194 YAEAVSAFDRAIEISPGLADAWAGRGGAFLAMKDFERA 231 >gi|221235845|ref|YP_002518282.1| tetratricopeptide repeat (TPR) protein [Caulobacter crescentus NA1000] gi|220965018|gb|ACL96374.1| tetratricopeptide repeat (TPR) protein [Caulobacter crescentus NA1000] Length = 549 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 77/275 (28%), Gaps = 17/275 (6%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEK-LEMMLQIPATREF 155 + A + LL A + + + A + + P R Sbjct: 66 DNGRAADALRLTTGPVALPQAS-AGLLMAHAAALKALGRTDEALTFNRRAVARAPGDRF- 123 Query: 156 AVYSLYFESCRIGDL---NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 S Y + +GDL + A+ A K + + D P V + + + A Sbjct: 124 ---SWYNLAATLGDLALDDEAEGAARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFV 180 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L L G + ++ + + L Sbjct: 181 RALAARP---SDATVHLNLAQLRWMRSGRSDEALAPLDAAIARHPADVTLRTIRSNVLTF 237 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINKESVESLV 329 A+ LE P I + + L A + ++ES Sbjct: 238 AGDHAGADATLEDALTRAPGDLAVRIAAARAAGAVGDRARMLAHAREAARLAPGALESQT 297 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 ++ + L G D A A + AP + L+L Sbjct: 298 VLCEALLAAGQADVAARTAEALVAAAPDDQYALVL 332 >gi|255948108|ref|XP_002564821.1| Pc22g08050 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591838|emb|CAP98093.1| Pc22g08050 [Penicillium chrysogenum Wisconsin 54-1255] Length = 937 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 40/245 (16%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SIA N AR +++Y F N ++L A ER + +++ + Sbjct: 548 SIARGNYETARAIYAYA--LRVFVNRRSIWL---AAADLERNHGTKEALWQVLEKAVEAC 602 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + E + L E + GD++ A+R +A + +P+ + A V+ AK+ +A Sbjct: 603 PQSEELWLL-LAKEKWQSGDIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAKKTDQARE 661 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240 L ++ A + R L N D Sbjct: 662 LLATARREAGTDRVWTKSVAFERQLGNIDDALDLVNQGLQLFPKADKLWMIKGQIYEAQN 721 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + + C S+ + A++ +A +L++ P +PE+ Sbjct: 722 KLPQAREAYGTGTRACPKSVALWLLASRLEEKAGAVVRARSVLDRARLAVPKNPELWTES 781 Query: 300 THLLS 304 + Sbjct: 782 VRVER 786 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 7/150 (4%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + +G+ + +L++ N + AA + K +LEK + P Sbjct: 545 AKASIARGNYETARAIYAYALRVFVNRRSIWLAAADLERNHGTKEALWQVLEKAVEACPQ 604 Query: 293 PEIANIYTHLLSE----NTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAK 347 E ++ L E + +R L N + + + K+ + DQA Sbjct: 605 SE--ELWLLLAKEKWQSGDIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAKKTDQAREL 662 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 A + A ++ E+ + D Sbjct: 663 LATARREAGTDRVWTKSVAFERQLGNIDDA 692 >gi|116754673|ref|YP_843791.1| TPR repeat-containing protein [Methanosaeta thermophila PT] gi|116666124|gb|ABK15151.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila PT] Length = 1261 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 101/303 (33%), Gaps = 61/303 (20%) Query: 125 LEVQIALAERQYNIAHEKLEM---MLQ----IPATREFAVYSLYFESCRIGDLNSAQ--- 174 L + A+ + A E M++ + E R GD+ A Sbjct: 833 LAAECAMRAGDHEAATE-FRANIDMVRSCRGEASVDIDGYLKKLEEIERAGDVEMAAEMH 891 Query: 175 -----RYA-----TKALDISPDAPWVTEAVVQQYVLA-------------KEWSRAITFL 211 YA +ALD + + E +Y A EWS A L Sbjct: 892 GILANAYADIFRWEEALDHYQKSLELFERTGDRYSAAETMFNMALIYRDRGEWSIAEDLL 951 Query: 212 NQ------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 ++ K + ++ +R L + + + AD + I S ES+ + A + Sbjct: 952 SRSMSEFRALKASPCYSMSRLNLGLLKEIRGADPEEDILSAITTFESIGAIPDLCEAYLA 1011 Query: 266 AAKSLISQNKKRKA--------EVILEKIW---KVNPHPEIANIYTHLLSENTVGKLKRA 314 A+ +++ + +A +IL+ + K+ + E + Y ++A Sbjct: 1012 MARVKLNRGEMSEARFYLSEAETLILKTGYDSMKIRLYIEWGDFYLSQAPFEARSSYQKA 1071 Query: 315 LRLEE---INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-------EIFLLL 364 L L + ++ +L + +L G D+A A+ + + L+ Sbjct: 1072 LALARKMGLTRDEGVALRSLGAASLNAGDYDEAEEHLQKALTLFKSINSMYDLLSTYALM 1131 Query: 365 AQI 367 A + Sbjct: 1132 ATL 1134 >gi|262305039|gb|ACY45112.1| acetylglucosaminyl-transferase [Scolopendra polymorpha] Length = 290 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALQLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ Q H + L L I + A + + P A Sbjct: 34 GQVAEAEECYNTALQLCPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A E LQ+ T ++ +L G A R KAL++ P+ Sbjct: 27 ANALKEKGQVAEAEECYNTALQLCPTHADSLNNLANIKREQGFTEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 XIVCDWTDYESRMKKLVAIVADQLDKNRLPSVHPHH 236 >gi|187251561|ref|YP_001876043.1| Tetratricopeptide domain-containing protein [Elusimicrobium minutum Pei191] gi|186971721|gb|ACC98706.1| Tetratricopeptide repeat protein [Elusimicrobium minutum Pei191] Length = 511 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 9/189 (4%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A++Y K L P + + + K ++ A+ +L ++ L+ Sbjct: 248 ARKYFEKILSYDPSSILANQFMAAISEDEKNYAAALKYLQAAGDYKTNASK-----LLQA 302 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 S A G+ + + K+ D S+ A SL K ++A I ++I P Sbjct: 303 SFYAARMGNAEEASSILDNAYKVSDKSVEVGYFYAVSLQDLGKHKEAVKIFKEILSQTPQ 362 Query: 293 PEIANIYTHLLSE---NTVGKLKRALRLEEINKESVESLVIVSKIALEM-GSIDQAHAKA 348 E A + + + + K+ + N + E+L ++ LE + +A Sbjct: 363 YEKARMMYGVSLDALGDNAELEKQMRIVVGQNPANSEALNSLAYALLEQNKKLKEAKKHI 422 Query: 349 MLAMKIAPR 357 ++++ P Sbjct: 423 DRSLQLKPD 431 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 73/254 (28%), Gaps = 54/254 (21%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A + K L P++ ++ ++Q + A + + L Sbjct: 43 YDKALDHFEKNLKEFPESEFLKTLILQTAIAAGKEDNYEEI------AKEVSQYKDKNSL 96 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN--KKRKAEVILEKIW 287 IA + + KG + + +L L + A+ L N +A LE+ Sbjct: 97 IASAAYSWSKGHLKDALSYYESALALDPE---NTAILAQYLTLLNGMDSERAVAFLEE-- 151 Query: 288 KVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSK-------- 333 PE+A + +L T L + + N E+ + ++ Sbjct: 152 YAEKVPELAAVIFQEAGNVNLKRGRTEDALTMYFKATKANPRYAEAYISRAEIYQKQSKL 211 Query: 334 --------------------------IALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQ 366 + + + +I +A + P + +A Sbjct: 212 QESLKEYKKLEDMGLADTYVYLRIGTLHVLLKNIPEARKYFEKILSYDPSSILANQFMAA 271 Query: 367 IEQANSHNTDKILY 380 I + + + Y Sbjct: 272 ISEDEKNYAAALKY 285 >gi|16124374|ref|NP_418938.1| TPR domain-containing protein [Caulobacter crescentus CB15] gi|221233057|ref|YP_002515493.1| porphyrin biosynthesis protein [Caulobacter crescentus NA1000] gi|13421226|gb|AAK22106.1| TPR domain protein [Caulobacter crescentus CB15] gi|220962229|gb|ACL93585.1| porphyrin biosynthesis protein [Caulobacter crescentus NA1000] Length = 747 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 83/254 (32%), Gaps = 25/254 (9%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + A Q A +L A ++L + +G + + AL+I Sbjct: 9 LAQAIAAHRSGQLQDAERLYRAILDAAPGHADANHNLGVLAVGVGKPQAGLSFLKAALEI 68 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P + + + A + A L Q K+ A+ + + L+ A Sbjct: 69 NPAQGQFWVSYIDALIAAGLPAAARDHLEQAKRRGLTG---DAVERLEKRLDPA--SQPP 123 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IANI--Y 299 + D++ + N A A +S +L ++ V E +A++ Sbjct: 124 QALLDSVVAQYRSGNLAAAESQAHALTLSFPNHELGWKVLGAVFSVTGRSEESLASMRQA 183 Query: 300 THLLSENTVG---------KLKRALRLE-------EINKESVESLVIVSKIALEMGSIDQ 343 L ++ KLKRA E + + + + + +++ + Sbjct: 184 LSLNPQDAETFKNLAILLLKLKRAEEAEAACRSALALAPDYPQVHLTLGNALIDLARAAE 243 Query: 344 AHAKAMLAMKIAPR 357 A A+++ P Sbjct: 244 AEESFRQAIRLKPD 257 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 72/253 (28%), Gaps = 18/253 (7%) Query: 88 LYTGLMSIAAHNIPLARKM-------HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + GL + A ++ A++ + L V A Sbjct: 84 IAAGLPAAARDHLEQAKRRGLTGDAVERLEKRLDPASQPPQALLDSVVAQYRSGNLAAAE 143 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + E L G + +AL ++P + + + Sbjct: 144 SQAHALTLSFPNHELGWKVLGAVFSVTGRSEESLASMRQALSLNPQDAETFKNLAILLLK 203 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 K A A ++ + L + +L D + ++++L + Sbjct: 204 LKRAEEAEAACRSALALAPDYP--QVHLTLGNAL--IDLARAAEAEESFRQAIRLKPDYS 259 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRAL 315 A +L + +AE + ++NP H + +++ L RA Sbjct: 260 EAHCNLGCALKLSGRLTEAETCFRRAIQLNPADAQAHNNLGDVFKDLGRFADAEAFYRAA 319 Query: 316 RLEEINKESVESL 328 + E +E+ Sbjct: 320 --IGLKPEYLEAH 330 >gi|302343834|ref|YP_003808363.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075] gi|301640447|gb|ADK85769.1| peptidase M48 Ste24p [Desulfarculus baarsii DSM 2075] Length = 503 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 7/169 (4%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L ++L + K D + E + A L+ + +A+ +L+ Sbjct: 296 LYGQALLSMRKRDYDQALRILDEMERKWPGDQDALKERGLCLVRVGRLDEAKSVLDAALT 355 Query: 289 VNP-HPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +P +P+I Y H ++ R+ + E++E+ ++ G++ + Sbjct: 356 KDPGNPQILFAIGEAYAHSGQDDVAA--SAFRRVVQAQPENLEARRMLGTSLGRAGNLGE 413 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 A + L K + + + + + ++ Q AL+ + DP Sbjct: 414 AALQLGLTFKQENNERLARYHLERAVSQLADRPELRQEAQKALNELNDP 462 >gi|297537340|ref|YP_003673109.1| hypothetical protein M301_0144 [Methylotenera sp. 301] gi|297256687|gb|ADI28532.1| TPR repeat-containing protein [Methylotenera sp. 301] Length = 510 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 5/158 (3%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL A + A ++ +LQ A+ + + R G AQ + K L+I Sbjct: 328 LLAAYQAFMRGEDANAQQQYRQVLQRDVRNVDALLGMAAIAQRQGRDADAQGWYQKVLEI 387 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P A+V + + A + K+ A L A A++ Sbjct: 388 EPRNSIAQTAIVSPQANT-DAAGA----ESRIKSMIAQQPEGANLHAALGNLYAEQSQWP 442 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 ++ + +L N+ + A SL K A Sbjct: 443 SAQEAYFNASRLAPNNADYAFNLAISLDQMGKSSLALK 480 >gi|163748943|ref|ZP_02156194.1| hypothetical protein KT99_12594 [Shewanella benthica KT99] gi|161331319|gb|EDQ02207.1| hypothetical protein KT99_12594 [Shewanella benthica KT99] Length = 386 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 96/310 (30%), Gaps = 44/310 (14%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + + ++ P R+ A+ L + G + A+ + + Sbjct: 83 GEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVKQDDHSED 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y + K+W +AI + K+K + N A + E D + Sbjct: 143 AETHLIDIYQVTKDWQKAINIIKSLKRKRQQSLKHNTAHFYCELANEQTDVAPQLKLLQA 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-T 307 A+ K + A + A+ + ++ K + +L K + + L + + Sbjct: 203 AL---KQDSDCGRALLTLAEKYLDSHEHAKCKALLAK---------LLDADIELFPDALS 250 Query: 308 VGK--------LKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + L L ++ + ++K +E G +A + + P Sbjct: 251 IARQVFHDSHDLAGYSDLLRQALQNGAGASVAITLAKNMIEQGETQEAEQLVLDGLYRHP 310 Query: 357 RKEIFL-LLAQIEQANSHNTDKILYWTQSALHAMPD------PLWIS-DDGYLSSV--WL 406 + F L+ + L + D P + G+ S W Sbjct: 311 TMKSFQHLMKM--HVQQAEDGQAKESLTM-LEKLVDQQIKFRPGYRCSGCGFPSHRLYWH 367 Query: 407 PLSPISKTLC 416 P K+ Sbjct: 368 --CPSCKSWG 375 >gi|147919289|ref|YP_686975.1| hypothetical protein RCIX2597 [uncultured methanogenic archaeon RC-I] gi|110622371|emb|CAJ37649.1| hypothetical protein RCIX2597 [uncultured methanogenic archaeon RC-I] Length = 292 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 11/135 (8%) Query: 133 ERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-- 187 +Y+ A E E ++ A + SL R G+ A ++AL +S D Sbjct: 89 NGKYDEAIEAFEDAMKLVSTEADTISILNSLGNAYLRAGNTQRALELYSEALQLSYDHDL 148 Query: 188 -PWVTEAVVQQYVLA---KEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLENADKGD 241 W + V ++ ++ F A + R I L + + G Sbjct: 149 DEWTQITLSNIGVAHVNMGDYKGSLKFFEDALDLARALDDARGERICLNNLAGVLNNMGQ 208 Query: 242 MIASYHDAIESLKLC 256 + +E+LK Sbjct: 209 REDALELFMEALKKA 223 >gi|17545117|ref|NP_518519.1| hypothetical protein RSc0398 [Ralstonia solanacearum GMI1000] gi|17427408|emb|CAD13926.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000] Length = 642 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 4/190 (2%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A A ++++P + + V +WS L + R AIL Sbjct: 139 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 198 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + + D + + A++ + A L+ K+ Sbjct: 199 LQQQMSK--SNDPAGAVSALQRLTTHDAQRPETHLALARAKVVAKDNTGALSELDTALKL 256 Query: 290 NP-HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P + + A + L +++ + + S++ + ++++ L DQA A+ Sbjct: 257 RPGYEDAAILAAELRADSDPDAAISGLRTFLKAAPASIDGHLALARMYLVRNQNDQARAE 316 Query: 348 AMLAMKIAPR 357 KIAP Sbjct: 317 FEALRKIAPT 326 Score = 38.0 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 52/144 (36%), Gaps = 5/144 (3%) Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + A ++L S+ A +++ + + E +L+ + A Sbjct: 139 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 198 Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L S + G + RL + + E+ + +++ + A ++ A+K+ P Sbjct: 199 LQQQMSKSNDPAGAVSALQRLTTHDAQRPETHLALARAKVVAKDNTGALSELDTALKLRP 258 Query: 357 RKEIFLLLAQIEQANSHNTDKILY 380 E +LA +A+S I Sbjct: 259 GYEDAAILAAELRADSDPDAAISG 282 >gi|319778147|ref|YP_004134577.1| tetratricopeptide tpr_1 repeat-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171866|gb|ADV15403.1| Tetratricopeptide TPR_1 repeat-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 580 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 88/307 (28%), Gaps = 8/307 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQI 149 G+ + A A + + + LV L A A E L + Sbjct: 36 GVKARQAQRFEAAAGLFRRALALRPDNADALVQL---GFAELGRNNLPAAREAFSKALSL 92 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T A + + R G+ ++A A + PD + V + S Sbjct: 93 APTYRDASFGMAEVEFRSGNPDAALPLAEEVSRAEPDNADASTLVANIRKAQRAGSSKAK 152 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +K A L+ + G + + + +L+L + + Sbjct: 153 PATARKIPRPPRPDPVAGLM-EEGRRSRAAGQLPEAENAYRRALRLAPKNTDILVAIGLV 211 Query: 270 LISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 SQ K +A ++ + P + + + + + ++VE Sbjct: 212 AGSQQKFDQAGQFFDQALAIRPRLLGARLGKVRLAIWQGDVPRARAMIDDVLGTAPDNVE 271 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 ++ + ++I+L +A + + L+ + + + AL Sbjct: 272 AMALDARISLLEQDYTRAEQSFQRVLAVDSHNAEALVGIGDLRRARGDDFAAREAYRQAL 331 Query: 387 HAMPDPL 393 P Sbjct: 332 AIEPGSA 338 >gi|195081785|ref|XP_001997359.1| GH23803 [Drosophila grimshawi] gi|193905926|gb|EDW04793.1| GH23803 [Drosophila grimshawi] Length = 900 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 538 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 595 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 596 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 655 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + +LK C SI I +A + Sbjct: 656 LLAEAVEVFPEFPKLWMMKGQIEEQQRRTDDAAATYTLALKKCPTSIPLWILSANLEERK 715 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 KA ILE+ N P+IA ++ + LK Sbjct: 716 GVLTKARSILERGRLRN--PKIAVLWMEAIRVELRAGLK 752 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 70/217 (32%), Gaps = 16/217 (7%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 W+ +A + A + + R+ S Sbjct: 499 KQTWIDDA--DFCAKENAFECARAVYAHALQMFPSKKS-----IWLRAAYFEKNHGTRES 551 Query: 246 YHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLL 303 ++ ++ C S + + AKS A IL ++ NP+ +I L Sbjct: 552 LEALLQRAVAHCPKSEILWLMGAKSKWMAGDVPAARGILSLAFQANPNSEDIWLAAVKLE 611 Query: 304 SENTV-GKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 SEN+ + +R L + + V++ +++ + D+A A+++ P Sbjct: 612 SENSEYERARRL--LAKARGSAPTPRVMMKSARLEWALERFDEALRLLAEAVEVFPEFPK 669 Query: 361 FLLL-AQIEQANSH-NTDKILYWTQSALHAMPDPLWI 395 ++ QIE+ + Y PLWI Sbjct: 670 LWMMKGQIEEQQRRTDDAAATYTLALKKCPTSIPLWI 706 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 247 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 305 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 306 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 355 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 356 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 408 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 409 RKVLNKARENIPTDRQIWTTAAKLEEANGN 438 >gi|152975043|ref|YP_001374560.1| TPR repeat-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023795|gb|ABS21565.1| Tetratricopeptide TPR_2 repeat protein [Bacillus cytotoxicus NVH 391-98] Length = 420 Score = 46.9 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 96/265 (36%), Gaps = 27/265 (10%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFE 163 + + E ++ ++ ++ + A + + +L A+ L Sbjct: 121 QKLLKAKEIMPEEPVIIFGLAELYSSKGEEKKAIQYYQSLLAEHKVMGGVIIALR-LAET 179 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 +G+ A Y + L+ D + Y +E+ RAI+ + KE + Sbjct: 180 LSAVGNWEEAIPYYEEGLEEQKDIHSLFGYAFTLY-QGEEYPRAISVW----QELKELDP 234 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + +G + SY + +K+ + S+ + A K +AE +L Sbjct: 235 EYASLYMYLAKCYEKEGMLQESYETLHDGIKVDELSVPLYVELANIAAKLGKMAEAEEVL 294 Query: 284 EKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +K +++P H + I Y ++L ++ L + + + ES +++ Sbjct: 295 QKALRLDPGH--LGAILKYVYILKGQ-----EKYEELIRVVENARESGEQDAQL-----L 342 Query: 341 IDQAHAKAMLAMKIAP---RKEIFL 362 D A AK L M + + Sbjct: 343 WDLAFAKKQLEMYSDALKHYESAYT 367 >gi|302502632|ref|XP_003013277.1| hypothetical protein ARB_00462 [Arthroderma benhamiae CBS 112371] gi|291176840|gb|EFE32637.1| hypothetical protein ARB_00462 [Arthroderma benhamiae CBS 112371] Length = 727 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 79/242 (32%), Gaps = 24/242 (9%) Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183 ++Y A + L P ++ A+ S Y + GD + + + + Sbjct: 306 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 365 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237 +P + + + + + R + + + W R + + E Sbjct: 366 NPKNYDLWFDLTRLEETSGDVDRIRDTYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 425 Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + GD + E LKL + A+ I Q A L + + P Sbjct: 426 ENGDAERARQIYTECLKLIPHKKFTFAKIWLLKAEFEIRQLDLVLARKTLGQAIGMCPKD 485 Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ Y + E + + K + + N ES + +++ + +++A A L Sbjct: 486 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 544 Query: 351 AM 352 + Sbjct: 545 GI 546 >gi|227818389|ref|YP_002822360.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] gi|227337388|gb|ACP21607.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] Length = 594 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 86/280 (30%), Gaps = 19/280 (6%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA-ERQYNIAHEKLEMMLQIP 150 L+ + A + ++ ++ +++ E + L+ Sbjct: 285 LIDATSGGHLWAERFDRDLTDIFAVQDDVTQQIVDALALNLREGDQQRLAAEQTESLEAY 344 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKEWS--- 205 ++ A+ +A+++ + AV +WS Sbjct: 345 DCFLRGREHMWR--LTREQNTQARELLQRAIELDAKFVPAYAFLAVTHGLAYINQWSQSP 402 Query: 206 -RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++ + A + A + + +A + L N + Sbjct: 403 SKSRELAIEAATRAVALDDQYPYAHWALGVVKLHLRQHDVAIAEAERVIALAPNLVEGYE 462 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-PEI-----ANIYTHL-LSENTVGKLKRALRL 317 +L + +A E+ +NP+ P++ A L E V LKR RL Sbjct: 463 NLGNALHYAGRSAEALAYFERAMALNPYYPDLFLHFYAQAMFQLGRYEEAVVILKR--RL 520 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 N ++ S V+++ +G ++A + + +I P Sbjct: 521 VR-NPDTDVSRVLLAASYGHLGRFEEARGEWVEVFRINPD 559 >gi|171913931|ref|ZP_02929401.1| TPR repeat [Verrucomicrobium spinosum DSM 4136] Length = 468 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 7/190 (3%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A + AL I P + ++ +A+ N + E + Sbjct: 146 WDLALQDFDNALKIQPRYAHALAGRGEARRNLGQYEKALEDFNA----SIELDPKNPGAY 201 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R L A G + D +++ L N A + S + + A+ + K+ Sbjct: 202 NNRGLTQASLGKREEAQADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKI 261 Query: 290 NP--HPEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +P P + + + + + + ++V + + + G ++A A Sbjct: 262 DPAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALA 321 Query: 347 KAMLAMKIAP 356 A+K+AP Sbjct: 322 DLDTAIKLAP 331 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 67/201 (33%), Gaps = 15/201 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 QY A E +++ A L S G AQ KA+D+ P+ Sbjct: 178 GQYEKALEDFNASIELDPKNPGAYNNRGLTQASL--GKREEAQADFNKAIDLLPNFAPAY 235 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 Y A T NQ K + L R++ +G + + D E Sbjct: 236 NNRGFNYASLGRTKDAQTDYNQALKIDPAYTP----ALNNRAMLRVAEGSLKDAIADFSE 291 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 ++L +++ A A + + KA L+ K+ P H +A Y + + Sbjct: 292 IIRLRPDNVHAYNNRAAAYDKAGQPEKALADLDTAIKLAPQDGQTHKNLAIAYVNRGRWD 351 Query: 307 TVGKLKRALRLEEINKESVES 327 LK + E VE+ Sbjct: 352 EA--LKEFTTASSLLPEDVET 370 >gi|197124020|ref|YP_002135971.1| hypothetical protein AnaeK_3630 [Anaeromyxobacter sp. K] gi|196173869|gb|ACG74842.1| protein of unknown function DUF124 [Anaeromyxobacter sp. K] Length = 428 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 48/173 (27%), Gaps = 31/173 (17%) Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + + + +AR E +GD + +L+L ++ Sbjct: 2 ARRADGGDGVDDELAFHLARGTELLAQGDADRARAALERALELGPKDAKVLALLGQACYR 61 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 Q + A W RL + N + V + Sbjct: 62 QGQFDDAA----IAW---------------------------QRLVDENPVEPAARVNLG 90 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 L+ ++A + +A+ + P + + S + W + A Sbjct: 91 LAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGAREWFRKA 143 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 2/135 (1%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G +A + AR + + V L Q + Q++ A + ++ Sbjct: 19 LARGTELLAQGDADRAR--AALERALELGPKDAKVLALLGQACYRQGQFDDAAIAWQRLV 76 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 A +L + A+R ALD++PD + + + + + A Sbjct: 77 DENPVEPAARVNLGLAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGA 136 Query: 208 ITFLNQKKKNAKEWN 222 + + + Sbjct: 137 REWFRKAGSDHMVAR 151 >gi|118581067|ref|YP_902317.1| hypothetical protein Ppro_2656 [Pelobacter propionicus DSM 2379] gi|118503777|gb|ABL00260.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 568 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 68/191 (35%), Gaps = 13/191 (6%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + L E++ A+ L + A E + + A L A + G + + + ++K Sbjct: 49 RLASLEGEYALALNCL----REAIEQDPSSAFLYSAMAENKLKIGQVQEALENINRAIKQ 104 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV-----GK 310 + + A + S K +A L +++P E + Y HL T Sbjct: 105 DPSFREPYVMAGVLMASAGKDTEAVGYLRTAIQLDPSKE--DAYLHLAVSLTRMFEYEEA 162 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQ 369 + L + N ESV + + +M A ++++ P + +A + Sbjct: 163 VTTLKSLVKQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYE 222 Query: 370 ANSHNTDKILY 380 A + K + Sbjct: 223 A-LGDYTKAIE 232 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 99/334 (29%), Gaps = 70/334 (20%) Query: 84 GYKALYTGL-------MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAER 134 Y A L ++ LA ++ + +L L Sbjct: 34 AYDAYSRALYLYSRSRLASLEGEYALALNC----LREAIEQDPSSAFLYSAMAENKLKIG 89 Query: 135 QYNIAHEKL-EMMLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 Q A E + + Q P+ RE V L + D A Y A+ + P Sbjct: 90 QVQEALENINRAIKQDPSFREPYVMAGV--LM--ASAGKDTE-AVGYLRTAIQLDPSKED 144 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + E+ A+T L K E L + S + Y DA Sbjct: 145 AYLHLAVSLTRMFEYEEAVTTLKSLVKQNPESVLGYYYLGRSYS--------QMKLYRDA 196 Query: 250 I----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 + +S++L A+I A S + KA I Y LL E Sbjct: 197 VGYFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEI----------------YHDLLDE 240 Query: 306 NTV-----GKL-------KRA-LRLEEINKES------VESLVIVSKIALEMGSIDQAHA 346 + +L +R LE +N+ + E++ + I LE+ D+A A Sbjct: 241 DESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLIHLELEQYDEAIA 300 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ P L + + D+ Sbjct: 301 VFNDLLEKDPSAHHVRLYLGVAYEEKGDLDRAKA 334 >gi|297530896|ref|YP_003672171.1| two component transcriptional regulator, winged helix family [Geobacillus sp. C56-T3] gi|297254148|gb|ADI27594.1| putative two component transcriptional regulator, winged helix family [Geobacillus sp. C56-T3] Length = 329 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 16/100 (16%) Query: 164 SCRIGDLNSAQRYATKALDISPDAP-----WVTEAVVQQYVLAKEWSRAIT----FLNQK 214 R + A++ +AL P P W + W AI L Sbjct: 66 KLRKENYRKARKLFEQALRFDPGDPVCRYHWGHLELYD-----GRWKEAIRQFQLVLQST 120 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 K+ + ++ RA+ A + GD + E+ K Sbjct: 121 SKHLEPYHYIRALCSSAIAYNQL--GDPETALRLLDEAKK 158 >gi|256810816|ref|YP_003128185.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86] gi|256794016|gb|ACV24685.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86] Length = 318 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 79/247 (31%), Gaps = 25/247 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 +I + K +++ + + Y L Q ++ A E E L I + V Sbjct: 65 GDIQRSTKYLEEIAKD---SKDPITYTLLGQCYELSGNFDKALECYEKSLGIDE-KFALV 120 Query: 158 YSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 ++F+S +G + + Y K + SPD + A+ LN+ Sbjct: 121 --VFFKSLCVGISDECDKTLTYCDKLIANSPDFVPAYIIKADLLRRLGRYEEALHCLNRA 178 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLIS 272 + N + ++L G S KL D + +S Sbjct: 179 L----DLKSNDKNAMYLKALILKKMGKYDESLKYYE---KLIDELNITCIEVIREGIYLS 231 Query: 273 --QNKKRKAEVILEKIWKVNPHPEIANIYTHLL----SENTVGKLKRALRLEEINKESVE 326 NK +AE +E K P + + Y LK + +I + Sbjct: 232 FLFNKLDQAEKYIEMGLKSIPG-DASLWYFKGRLYEKQGKAEEALKYYNKALQIMPNHTK 290 Query: 327 SLVIVSK 333 +L+ ++ Sbjct: 291 ALLAKAR 297 >gi|312966789|ref|ZP_07781007.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75] gi|312288253|gb|EFR16155.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75] Length = 389 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSACVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|225458091|ref|XP_002280691.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 788 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 11/191 (5%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCDNSIM 261 A + A+ A LL + +G ++++ E+ LC Sbjct: 280 EAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGMVMSACEHYREAAILCPTHFR 339 Query: 262 ASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 A +L + R A LE K + H ++A+ H + E + + Sbjct: 340 ALKLLGSALFGVGEYRAAVKALEEAIFMKADYADAHCDLASA-LHAMGEGEKA-IPVFQK 397 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 ++ V++L + + ++MG +A + + P L + + + Sbjct: 398 AIDLKPGHVDALYNLGGLYMDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAE 457 Query: 377 KILYWTQSALH 387 + + AL Sbjct: 458 EAKKALKEALK 468 >gi|170727983|ref|YP_001762009.1| TPR repeat-containing protein [Shewanella woodyi ATCC 51908] gi|169813330|gb|ACA87914.1| Tetratricopeptide TPR_2 repeat protein [Shewanella woodyi ATCC 51908] Length = 729 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 4/132 (3%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 +G L L +A A + + + L I A Q + A+ Sbjct: 563 RGEGRLNLALQHLAIGQWEKAETQLIASIATDPYFDPSYINL--ADIYRATGQTSKANNT 620 Query: 143 LEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + +L P + Y L R D +A++Y A ++P + Sbjct: 621 FKEGLLHNPNSSGL-HYGLGLHLIRAKDYLAAEKYLENAATLAPQNVQYQYVYLVALDHN 679 Query: 202 KEWSRAITFLNQ 213 + + A+ +L + Sbjct: 680 GKTTDALDYLKR 691 >gi|301615544|ref|XP_002937238.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 5-like [Xenopus (Silurana) tropicalis] Length = 498 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 27/214 (12%) Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE--AVVQQYVLAKEWS------ 205 +Y Y E A+ KAL + PD P + A V + ++ Sbjct: 182 LLTLYGKYCE--------RAKECFEKALVLDPDNPELNSGYATVMYRLENQDLILYETSK 233 Query: 206 -RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 ++I L + K + +A+L +L+ G E+L+ +S Sbjct: 234 YKSIELLKRAVKLNENDTVIKALL----ALKYVYLGQAEEGGKIMEEALRQTPDSPYLLR 289 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV-GKLKRALRLE 318 A K K A IL+K P H +I Y + + + + + Sbjct: 290 HAGKFYRIVGKTDVAITILKKALNQTPTSGSLHHQIGLCYREKMKFDAMSSAIFHFEKAV 349 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E+ VE+ + ++++ D+A + Sbjct: 350 ELKIFFVEAYIDLARMYGRANQFDKAEDTFQKVL 383 >gi|134296605|ref|YP_001120340.1| HemY domain-containing protein [Burkholderia vietnamiensis G4] gi|134139762|gb|ABO55505.1| HemY domain protein [Burkholderia vietnamiensis G4] Length = 395 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 50/369 (13%), Positives = 116/369 (31%), Gaps = 14/369 (3%) Query: 26 EDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY 85 V + + S + + + L + R P + + +K Sbjct: 28 GQVLLVYPPYRVDVSLNLFVIGIVVLFIVVYALMRIVRNIWLMPRRVAAYRARARNEKAQ 87 Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +L + ++ A A K + A A + + + + Sbjct: 88 SSLRDAIANLYAGRFSRAEKAARDAMAVDANQGAASLV-----AATAAHRMHEYTRRDDW 142 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEW 204 + ++ A L R ++ A A + + V ++ K W Sbjct: 143 LSKVDAPEWQDARLLATADMRADARDADGALAALADLQAGGKRIHAQQVALRAQQQLKNW 202 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENA---DKGDMIASYHDAIESLKLCDNSIM 261 + + L + + + A+ L ++ EN + D A L S Sbjct: 203 AEVLK-LAKALEKRDALHPAAAVRLRQQAAENLLRERRHDADALLEVWQSLSALERQSPR 261 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 + AA+ L+S ++ +A I+E N + Y + + ++RA ++ + Sbjct: 262 LADLAAELLVSLERRTEARRIVEDALAHNWDARLLRRYPDTAGNDALPLIQRAEGWKKDH 321 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANSHNTDK 377 + + L + ++ + +A + A+K A LA++ + Sbjct: 322 PDDADLLFALGRLCQQQQLWGKAQSFLEAALKQADNDALKVRTHRALARLFEHLGETDKA 381 Query: 378 ILYWTQSAL 386 ++ +SAL Sbjct: 382 AKHYRESAL 390 >gi|291617602|ref|YP_003520344.1| YciM [Pantoea ananatis LMG 20103] gi|291152632|gb|ADD77216.1| YciM [Pantoea ananatis LMG 20103] gi|327394031|dbj|BAK11453.1| N-acetylglucosaminyl transferase YciM [Pantoea ananatis AJ13355] Length = 389 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 84/281 (29%), Gaps = 55/281 (19%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + + T Sbjct: 83 GEVDRAIRIHQSLMESASLSYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFKQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++ + +W +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLLIHQATSDWVQAIEVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ + A +L+ D+ + + S SI + L+ Sbjct: 167 LVKLGKDKQKGEIAHFYCELALQAMSSDDLDRAMTLLKKGESADRQSARVSIMMGRILME 226 Query: 273 QNKKRKA----EVIL--EKIWKVNPHPEIANIYTHLLSENT-VGKLKR-ALRLEEINKES 324 + + KA + +L +K P + + L + LKR E Sbjct: 227 KGEHAKAIEHLQRVLDQDKELVSETLPMLETCFQRLNQPDAWAAFLKRCVEENTGAAAEL 286 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLL 364 S ++ + E A ++ P +F L+ Sbjct: 287 YLSAILEQEQGAEA-----AQNYINNQLQRHPNMRVFHRLM 322 >gi|254877001|ref|ZP_05249711.1| type IV pili lipoprotein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843022|gb|EET21436.1| type IV pili lipoprotein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 300 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 18/163 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L++ Q E +A Y++S G + A++Y KAL Sbjct: 90 TKLIKAQELANEHNQKLAIVDY-----------AG--GYYYQSI--GANSIAEKYYQKAL 134 Query: 182 DISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 D P Q +++SRA + + + + L ++ + K Sbjct: 135 DNHPKNYEAMNFYAQFLCTEKEDYSRAQELFEKALFMPNNNDMAQTLFLYSQCMYKQGKK 194 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 D +Y + K + A + A+ + + ++ ++ Sbjct: 195 DDALAYMQ--RADKFRLDYKAAKLRLAQMYFERGEYKECYKVI 235 >gi|241668467|ref|ZP_04756045.1| type IV pili, pilus assembly protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 297 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 18/163 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L++ Q E +A Y++S G + A++Y KAL Sbjct: 87 TKLIKAQELANEHNQKLAIVDY-----------AG--GYYYQSI--GANSIAEKYYQKAL 131 Query: 182 DISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 D P Q +++SRA + + + + L ++ + K Sbjct: 132 DNHPKNYEAMNFYAQFLCTEKEDYSRAQELFEKALFMPNNNDMAQTLFLYSQCMYKQGKK 191 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 D +Y + K + A + A+ + + ++ ++ Sbjct: 192 DDALAYMQ--RADKFRLDYKAAKLRLAQMYFERGEYKECYKVI 232 >gi|261379043|ref|ZP_05983616.1| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685] gi|269144495|gb|EEZ70913.1| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685] Length = 616 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 99/315 (31%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 74 LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132 Query: 184 SPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + + L E ++ + L + A + R LL+A++ D Sbjct: 133 EPIPGEAQKRMTWLRSVLRGEENQRLDGLEEVLAQADDGQNRRVFLLLAQAAVQQDGLAK 192 Query: 243 IAS-----------------------------YHDAIESL----KLCDNSIMASICAAKS 269 AS AI +L KL + ++ + Sbjct: 193 KASEAVHRAAMKYGHMSEAAIADVVFNVQVREKDKAIAALQRLAKLDTEILPPTLVTLRL 252 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEI 320 + R+ IL ++ ++ ++ + ++ +LK L + Sbjct: 253 VA-----RRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLRRPDDAYERLK---VLMDA 304 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + ++ A ++ L A + A+ + Sbjct: 305 NPNAD----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRD 360 Query: 375 TDKILYWTQSALHAM 389 K+ W + A Sbjct: 361 YAKVRQWLTK-VSAP 374 >gi|159027098|emb|CAO89283.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 363 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 67/205 (32%), Gaps = 13/205 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLE--MM 146 GL++ + +A + + V L Q Y A E Sbjct: 12 GLLAGGCFSPSIA---IADNPAGAIVSKDSQVNELLRQARQLVKNGNYGEAIAIYEQAAA 68 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L R F+ R GD N+A + KAL + P P A+ +++ Sbjct: 69 LDGNNARIFSGIGFLQ--TRQGDYNAAAQAYQKALSLDPSNPDFFHALGYSLANIGDYNN 126 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A T + + ++ + + + + + L L N+ A Sbjct: 127 AATAYYYAIQIEPKNVQH----YLGLGVVLLRQKNYAKAGEVYQWILALDPNNQQAHEIM 182 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 K+LI QNK +A L+K + P Sbjct: 183 GKALIEQNKSSEAFDFLQKSLQRFP 207 >gi|149376328|ref|ZP_01894091.1| TPR repeat protein [Marinobacter algicola DG893] gi|149359342|gb|EDM47803.1| TPR repeat protein [Marinobacter algicola DG893] Length = 187 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 2/137 (1%) Query: 51 FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110 L A +L+ + + PA + + + + + + AR + + Sbjct: 3 LLLAVVLVAGCASSPKTDPADAAEAERQAREAELTQDFSEAVALLRGGDSGNARDLFEQI 62 Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 Q L L IAL E + A +L+ A+ L + G+ Sbjct: 63 HQADPERTGPLANL--GIIALQEGNADEAEAYFRQVLERDPEHSAALTHLGVMAREQGEF 120 Query: 171 NSAQRYATKALDISPDA 187 A+ +AL+ P Sbjct: 121 EQAETLYRQALEADPGH 137 >gi|186472115|ref|YP_001859457.1| cellulose synthase domain-containing protein [Burkholderia phymatum STM815] gi|184194447|gb|ACC72411.1| cellulose synthase operon C domain protein [Burkholderia phymatum STM815] Length = 1542 Score = 46.9 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 47/336 (13%), Positives = 99/336 (29%), Gaps = 37/336 (11%) Query: 73 FHMLHKRNYDKGYKA----LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL----VYL 124 + + G A + G ++ ++ A+ S V + L V L Sbjct: 269 RRASERAQQNAGADARGRTVAEGFAALDRGDLVTAKARFSSVLASSPNDGDALGGMGVAL 328 Query: 125 LE----VQI------ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L+ Q A + E L T E L + G+L A+ Sbjct: 329 LKQEQFAQAREYLLRASQQGGAARWREALNSATYWMYTSE----GLGEQ--SNGNLAHAK 382 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIA 231 KA+ +SP A+ + + + A +++ + + R L A Sbjct: 383 ALFEKAIAVSPGDVTAQTALGDLLMQSGDPRGAEAAFRMALRRQADNPDAIRGLVGALAA 442 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + + + D A A++ ++ A + E N Sbjct: 443 QGRGDDALSFANQLTEAQRKKVGGADRLRGEAQAAQARAAEARGDLGNARSLFEDALLSN 502 Query: 291 P-HP----EIANIYTHLLSENTVGKLKRALR-LEEINKESVESLVIVSKIALEMGSIDQA 344 P P ++A IY + K + L ++ + ++ + +A +M Sbjct: 503 PDDPWLRLDLARIYAK---QGAYANAKSIMDGLIALHPDMPDAFYASALLAADMQDWRYG 559 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ + LL ++ + L Sbjct: 560 LSQLERIPVNKRTDAMALLQHRLWVHQQCDEAVALA 595 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 90/286 (31%), Gaps = 30/286 (10%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL LM + + A ++ + + + L+ A A + Sbjct: 401 ALGDLLM--QSGDPRGAEAAFRMALRRQADNPDAIRGLVGALAAQGRGD--DALSFANQL 456 Query: 147 LQIPATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + + + GDL +A+ AL +PD PW+ + + Y Sbjct: 457 TEAQRKKVGGADRLRGEAQAAQARAAEARGDLGNARSLFEDALLSNPDDPWLRLDLARIY 516 Query: 199 VLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLE------NADKGDMIASYHDAIE 251 ++ A + ++ + + A L+A ++ + + + DA+ Sbjct: 517 AKQGAYANAKSIMDGLIALHPDMPDAFYASALLAADMQDWRYGLSQLERIPVNKRTDAMA 576 Query: 252 --SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI--ANIYTHLLSEN 306 +L + A +L + +A +L V H E+ A ++ + + Sbjct: 577 LLQHRL---WVHQQCDEAVALAKSGRVAQARGVLNNAEPVAGNHAELIGAIASAYVNTGD 633 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMG---SIDQAHAKAM 349 T L + L+ + I L G + + + Sbjct: 634 TARALMMVRGAVARSPNDAGLLLTDAGILLNAGQDAELGEVMRRLA 679 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 16/237 (6%) Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRAL-RL 317 + + +L N A +L P+ P+I L + N A RL Sbjct: 696 VAIVVRRTDALRQANDLASAFDVLSPWLAARPNDPDILAALARLYTANNDNANALATYRL 755 Query: 318 E-EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375 N + L+ + A ++ D A + A++IAP + + ++ +A N+ Sbjct: 756 ALAQNPNDLGLLLNAAGAATQIRKFDFAESSLRHALRIAPNNADALAAMGRMYRAQGRNS 815 Query: 376 DKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKI--PTKSPEYISSE 433 Y Q AL A P ++ G + ++ T W + P + P + Sbjct: 816 LAAQY-FQRALIAQNAP--LARQGTQPA------GVNGTPVPSGWDVPLPPRGPIPLPGT 866 Query: 434 NINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDS-TIHPLDPHIRQPDDPGI 489 N + A ++ + N + +P + + I P Q D G+ Sbjct: 867 NPFANRTSADASNSVPFPAQNTQPYLMPMPAYTPPTQPAPYIAPQTQPASQIDSLGV 923 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 23/204 (11%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE----WSRAITFLNQKKKN 217 + ++AQ Y +AL P P + ++ Y W A L Q + Sbjct: 126 RLAQSGQQASAAQAY-RQALGTKPANP---QLALEYYQALGSSPQGWEEARRGLEQLARE 181 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA---KSLISQN 274 ++ R A + + +L +SI+ + A ++L+ Sbjct: 182 HRDDPR------FALAYARHLTYREANRREGIEQLAQLSKDSIVGAQAKAAWRQALLWLG 235 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK- 333 R ++ L + + P+ A + S + + RA + N + V++ Sbjct: 236 -VRASDAPLFQAYLSV-APDDAAVKARADSISEQDR--RASERAQQNAGADARGRTVAEG 291 Query: 334 -IALEMGSIDQAHAKAMLAMKIAP 356 AL+ G + A A+ + +P Sbjct: 292 FAALDRGDLVTAKARFSSVLASSP 315 >gi|226292328|gb|EEH47748.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb18] Length = 938 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 90/260 (34%), Gaps = 37/260 (14%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R +A + +P+ + A V+ AK+ A L+ ++ A Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADAKQTEHARELLSTARREAG 675 Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250 + R L N ++ + Sbjct: 676 TDRVWIKSVAFERQLGNTDRALDLVNQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 + C S+ + A++ KA IL++ P+ A ++T + E Sbjct: 736 TGTRACPKSVPIWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWTESVRVERRAN 793 Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A L +E S + S+ LE + + + K+ +F+ +A+ Sbjct: 794 NISQAKVLMAKALQEVPNSGFLWSESIWNLEPRTHRKPRS-LEAIKKVDNDPILFVTVAR 852 Query: 367 IEQANSHNTDKILYWTQSAL 386 I DK + W + A+ Sbjct: 853 IFWGERK-LDKAMTWFEKAI 871 >gi|322710253|gb|EFZ01828.1| pre-mRNA-splicing factor prp1, putative [Metarhizium anisopliae ARSEF 23] Length = 925 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 113/329 (34%), Gaps = 45/329 (13%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-- 151 SI AR +++Y + L + A ER + E++ Q Sbjct: 535 SINRGKYDTARAIYAYAIRIFYNSRT-----LRMAAADLERNHGTKESLWEVLEQAVDAC 589 Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T E L E + G++++A+ +A + +P+ + A V+ +A Sbjct: 590 PTSEDLWMMLAKEKWQAGEVDNARLVLKRAFNKNPNNEDIWLAAVKLESENDNAEQARKL 649 Query: 211 LNQKKKNAKE--------------WNRNRAILLIARSLEN---------------ADKGD 241 L ++ A A+ L+ ++L+ D G Sbjct: 650 LEIAREQAPTDRVWMKSVVFERVQGQVETALDLVLQALQLFPAAAKLWMLKGQIYEDLGK 709 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300 + +K+ S+ + A+ KA +L++ P P++ Sbjct: 710 TAQAREAYAAGVKVVPKSVPLWLLYARLEEKSGMTIKARSVLDRARLAVPKSPQLW--CE 767 Query: 301 HLLSENTVGKLKRALRL-EEINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPR 357 + E G L +A + + +E +S ++ + LE + + + K+ Sbjct: 768 SVRLERRAGNLSQAKSIMAKAQQEIPKSGLLWVEQIWHLEPRTQRKPRS-LEAIKKVDND 826 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSAL 386 +F+ +A+I A+ +K W + AL Sbjct: 827 PLLFVGVARIFWADRK-LEKAQNWFEKAL 854 >gi|297622686|ref|YP_003704120.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix DSM 17093] gi|297163866|gb|ADI13577.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM 17093] Length = 740 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 19/275 (6%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL L+ + LA + L E Q A A ++ Sbjct: 346 ALIGELVRRGEGDEALAVLEARLAADPDPSAYALASALGEAQSARALEILREGRQRYPQD 405 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + + G+L +A+ +ALD +P P + + A Sbjct: 406 AALALAEAEVLRG-------TGNLEAAEAVLQEALDAAPTNPELANQLAITQAQAGRTDE 458 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L + L LE I + Sbjct: 459 ARATLEAALAQNPQARGVLERNLAQLLLEAGQNEAAIGVLEPLLARDAGDPELYT---LY 515 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 +L + +A L++ ++ P + A L+ +N +L A RL + + Sbjct: 516 GLALGGAGRFDQALNALDEALRLAPTSQDAQNARRLVEQN--QRLTGAERLA-FDPDVAA 572 Query: 327 ------SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 S + ++A D+A A Sbjct: 573 VFGAGLSALQADELAAAQREFDRAAELQADVADEA 607 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 40/199 (20%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A +A++ P++ + A++ + V E A+ L + + + Sbjct: 318 RRTDDAEGALITLREAVERVPESASLHAALIGELVRRGEGDEALAVLEARLAADPDPS-- 375 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + E + ++ A+ L AE +L+ Sbjct: 376 -----AYALASALGEAQSARALEILREGRQRYPQDAALALAEAEVLRGTGNLEAAEAVLQ 430 Query: 285 KIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + P PE+AN + +++ + G D+ Sbjct: 431 EALDAAPTNPELAN------------------------------QLAITQA--QAGRTDE 458 Query: 344 AHAKAMLAMKIAPRKEIFL 362 A A A+ P+ L Sbjct: 459 ARATLEAALAQNPQARGVL 477 >gi|117623540|ref|YP_852453.1| hypothetical protein APECO1_440 [Escherichia coli APEC O1] gi|218558270|ref|YP_002391183.1| tetratricopeptide repeat protein [Escherichia coli S88] gi|115512664|gb|ABJ00739.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218365039|emb|CAR02742.1| conserved hypothetical protein [Escherichia coli S88] gi|323949116|gb|EGB45008.1| TPR repeat-containing protein [Escherichia coli H252] Length = 389 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|24112679|ref|NP_707189.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 301] gi|24051595|gb|AAN42896.1| putative heat shock protein [Shigella flexneri 2a str. 301] Length = 389 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|197102096|ref|NP_001126072.1| interferon-induced protein with tetratricopeptide repeats 2 [Pongo abelii] gi|55730255|emb|CAH91850.1| hypothetical protein [Pongo abelii] Length = 472 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 33/218 (15%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H +I Y RA L+ +N E+ + + LE+ I Sbjct: 274 LEYIPNNAYLHCQIGCCY-------------RAKALQVMN--LRENGMYGKRKLLEL--I 316 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 A A A + + +LA + E+A Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354 >gi|225875069|ref|YP_002756528.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] gi|225792210|gb|ACO32300.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] Length = 476 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 74/203 (36%), Gaps = 6/203 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQI 149 L++ + PLA K+ + + YL QIA R + + L + Q+ Sbjct: 221 ALLAEDTGDTPLAVKLLRAAIA--AEPRDEMNYLEFAQIAFDHRSPQVGIDMLNAGLTQL 278 Query: 150 PATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P + + + +I N+A +A ++P +A+ + + A+ Sbjct: 279 PNAAQLYLARGVLE--VQISHFNAAIADFQRAHKLAPQLSLAMDAMGIMESQQYKQTSAL 336 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 ++ ++ + + + A S N K I + A +S++ A A Sbjct: 337 QLYRKEARSHPKDGLLQYLYAEALSEANPTKDASIEAIAAARKSVESEPGYAPARDLLAL 396 Query: 269 SLISQNKKRKAEVILEKIWKVNP 291 + + ++A + K+NP Sbjct: 397 LYLRIHNSQQALKEAQTALKINP 419 >gi|30062802|ref|NP_836973.1| tetratricopeptide repeat protein [Shigella flexneri 2a str. 2457T] gi|30041050|gb|AAP16780.1| putative heat shock protein [Shigella flexneri 2a str. 2457T] gi|281600703|gb|ADA73687.1| putative heat shock protein [Shigella flexneri 2002017] gi|313649468|gb|EFS13899.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str. 2457T] gi|332757935|gb|EGJ88262.1| tetratricopeptide repeat family protein [Shigella flexneri 4343-70] gi|332759437|gb|EGJ89745.1| tetratricopeptide repeat family protein [Shigella flexneri 2747-71] gi|332760376|gb|EGJ90666.1| tetratricopeptide repeat family protein [Shigella flexneri K-671] gi|332767516|gb|EGJ97710.1| tetratricopeptide repeat family protein [Shigella flexneri 2930-71] gi|333004596|gb|EGK24120.1| tetratricopeptide repeat family protein [Shigella flexneri VA-6] gi|333005457|gb|EGK24975.1| tetratricopeptide repeat family protein [Shigella flexneri K-218] gi|333007619|gb|EGK27097.1| tetratricopeptide repeat family protein [Shigella flexneri K-272] gi|333019119|gb|EGK38409.1| tetratricopeptide repeat family protein [Shigella flexneri K-304] Length = 389 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|268573864|ref|XP_002641909.1| C. briggsae CBR-OGT-1 protein [Caenorhabditis briggsae] Length = 1148 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 77/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ + N +V+ + + ++A + + +++ A +L Sbjct: 344 RAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQPHFPDAYCNLANA 403 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G ++ A+ KAL++ P + + A + + E+ Sbjct: 404 LKERGSVSEAETMYLKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF-- 461 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + E++++ A +L A Sbjct: 462 --AAAHSNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSAIACY 519 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I+ N ++ ++ + ++ ++ Sbjct: 520 NRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYGTALKLKPDFPDAFCNLA 571 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 21/281 (7%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAERQYNIAH 140 Y L L+S ++ A + + L LL+ + A Sbjct: 226 AYINLAAALVS--GGDLEQAVAAYFNALRINPDLYCVRSDLGNLLKAM-----GRLEEAK 278 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 ++ A +L G++ A + KA+ + P+ + Sbjct: 279 VCYLKAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKE 338 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A+ + RA++ + + N A++ + ++G + + ++++L + Sbjct: 339 ARIFDRAVSAYLRAL----NLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIELQPHFP 394 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRAL 315 A A +L + +AE + K ++ P H + +ANI +L Sbjct: 395 DAYCNLANALKERGSVSEAETMYLKALELCPTHADSQNNLANIKREQGKIEDATRLY-LK 453 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L EI E + ++ I + G + A A++I+P Sbjct: 454 AL-EIYPEFAAAHSNLASILQQQGKLQDAILHYKEAIRISP 493 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A M+ + H + L I + + A L+I A Sbjct: 408 GSVSEAETMYLKALELCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 465 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ ISP + + S AI N+ + Sbjct: 466 SNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSAIACYNRAIQI 525 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G+M + +LKL + A A L Sbjct: 526 NPAF----ADAHSNLASIHKDAGNMAEAIQSYGTALKLKPDFPDAFCNLAHCL 574 >gi|330818349|ref|YP_004362054.1| TPR domain protein [Burkholderia gladioli BSR3] gi|327370742|gb|AEA62098.1| TPR domain protein [Burkholderia gladioli BSR3] Length = 620 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 13/248 (5%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180 +L ++AL Q A + + + A + + + D +A + Sbjct: 94 QVLAAEVALQRGQPAPAFQTYLALARDTKDPRMAQRATEIALAAQSPADALAAANLWRE- 152 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 +PD+ + VLA + A L ++ NR AIL +L+ Sbjct: 153 --YAPDSNRAAQVDAALLVLAGKPLDAEPLLGRELARTNGDNRGDAIL----ALQALIAR 206 Query: 241 DMIASYHDAIESLKLCDNSI-MASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + L D+ I + A A+ ++ + K A L++ ++ P A + Sbjct: 207 GPNRVDGLTVLQHLLKDDLIRPEARLAIARQQLAVDDKPAAVTSLKQALELKPDYLPAAL 266 Query: 299 YTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + + + + N ++ E + ++++ L +D A + + P+ Sbjct: 267 MLSQMGPDERAIGVASFEKYVQQNPKAREGRLALAQLYLADNRLDDAQKQFETMHRNDPK 326 Query: 358 KEIFLLLA 365 + L+A Sbjct: 327 EPA-PLMA 333 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 53/202 (26%), Gaps = 39/202 (19%) Query: 185 PDAPWVTEAVVQQYVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 P P + V Q + + A ++ K+ + IA + ++ Sbjct: 83 PGVPLSAQIVYQVLAAEVALQRGQPAPAFQTYLALARDTKDPRMAQRATEIALAAQS--- 139 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + A + +S A+ A L+ K AE P + Sbjct: 140 --PADALAAANLWREYAPDSNRAAQVDAALLVLAGKPLDAE------------PLLGREL 185 Query: 300 THLLSENTVGKLKRALRLEEINKES-----------------VESLVIVSKIALEMGSID 342 +N + L E+ + +++ L + Sbjct: 186 ARTNGDNRGDAILALQALIARGPNRVDGLTVLQHLLKDDLIRPEARLAIARQQLAVDDKP 245 Query: 343 QAHAKAMLAMKIAPRKEIFLLL 364 A A+++ P L+ Sbjct: 246 AAVTSLKQALELKPDYLPAALM 267 >gi|170036979|ref|XP_001846338.1| o-linked N-acetylglucosamine transferase, ogt [Culex quinquefasciatus] gi|167879966|gb|EDS43349.1| o-linked N-acetylglucosamine transferase, ogt [Culex quinquefasciatus] Length = 838 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 107 GQVQEAEDCYNTALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 163 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 164 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 223 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 224 INPAF----ADAHSNLASIHKDSGNIPDAIQSYRTALKLKPDFPDAYCNLAHCL 273 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + N A L + Sbjct: 83 RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLCP----NHADSLNNLANIKR 138 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 139 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 196 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I A A+ Sbjct: 197 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPDAIQSYRTAL 256 Query: 353 KIAPR 357 K+ P Sbjct: 257 KLKPD 261 >gi|115523543|ref|YP_780454.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53] gi|115517490|gb|ABJ05474.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53] Length = 732 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 101/298 (33%), Gaps = 31/298 (10%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 RK + E ++ L+ ++ Q + A + +L+ A++ Sbjct: 19 RKNAPPLRSNPDKDYEPVLQLVRARMLHQAGQLDEAKSAYKKVLKKAPNNFQALHFYALA 78 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--- 220 + G L + R +AL I P++ + + A + A+ ++ + Sbjct: 79 EHQSGHLETGIRNLKRALLIDPNSAPAHSDMANMMIDANRFEEALKSCDKAIALDPKLVL 138 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + NR L L D +AS DA+ L N + SL + +A Sbjct: 139 AHHNRGHTL----LHLERLEDAVASLDDALA---LDPNRADSWNDRGNSLQKLARYDEAL 191 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEI------NKESVESLVIVSK 333 K ++P ++A ++ +T +LKR L K VE+ + ++ Sbjct: 192 ESYAKAIAIDPLHDMA----YMNRASTFKELKRLDDALASYDRALSIGKRPVEAGICRAE 247 Query: 334 IALEMGSIDQAHAKAMLAMKIAP-RKEIFLL----LAQIEQANSHNTDKILYWTQSAL 386 I L ++ A + I P L +A + + + + AL Sbjct: 248 ILLNKKNVKDAMQTVTAVLNIEPNSVSGLTLLGNCMASL-----GDAETAIALYSRAL 300 >gi|114631703|ref|XP_507902.2| PREDICTED: interferon-induced protein with tetratricopeptide repeats 2 [Pan troglodytes] Length = 472 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 71/218 (32%), Gaps = 33/218 (15%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H +I Y RA L+ +N E+ + + LE+ I Sbjct: 274 LEYIPNNAYLHCQIGCCY-------------RAKVLQVMN--LRENGMYGKRKLLEL--I 316 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 A A A + + +LA + E+A Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354 >gi|307322270|ref|ZP_07601636.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti AK83] gi|306892087|gb|EFN22907.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti AK83] Length = 624 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 56/148 (37%), Gaps = 14/148 (9%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + L + + + + +++ L + A A++ +Q K +A + ++ Sbjct: 420 AEAHASLGLALSLRERHSEAMAEFDQAIALDPDLFEAHYFYARACFTQGKLDEAARLFQR 479 Query: 286 IWKVNPHPE-------IANIYTHLLSE---NTVGK--LKRALRLEEINKESVESLVIVSK 333 + P+ + N+ L E N + + RA R + E+ + + Sbjct: 480 AADIK--PDDYQALLVLINVLRSLGREQEMNAAAREGVARAERELMMRPENPRPAYLGAV 537 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +G +D+A A+ A+ I P + Sbjct: 538 GLAALGELDRAKEWAVRALAIDPDDRLA 565 >gi|322421463|ref|YP_004200686.1| hypothetical protein GM18_3992 [Geobacter sp. M18] gi|320127850|gb|ADW15410.1| hypothetical protein GM18_3992 [Geobacter sp. M18] Length = 694 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 57/176 (32%), Gaps = 19/176 (10%) Query: 133 ERQYNIA------HEKL---EMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKA 180 E A + E +L+ P A E+ + G+ A R+ +A Sbjct: 211 EGDSTEAVFQDGQQQDFPTLEELLRNP--AAVAAQEQLAEARKAIGFGERAIAIRHLKRA 268 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIARSLE 235 L+ P W + + Q + + + + K A I + Sbjct: 269 LEHRPLDIWASYTLAQLLMQSGRKNDCREAFEIASRAGKMALHDRRKVRSADCFILAAKA 328 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 GD+++ A ++++ A I A S NK ++A +++ P Sbjct: 329 ANKAGDVVSGMSSAENAVEVTPWLASAHIELACQFASDNKVQEAVNKAMFAFQLQP 384 >gi|258405779|ref|YP_003198521.1| type II secretion system protein E [Desulfohalobium retbaense DSM 5692] gi|257798006|gb|ACV68943.1| type II secretion system protein E [Desulfohalobium retbaense DSM 5692] Length = 785 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 35/241 (14%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRY----ATK 179 L + A + A + + TR A L + ++ D + + A + Sbjct: 16 LVQETAEQGDLRSSARAAQRTLFVLRQTRPLAARKGLTKQWRKMEDYFAGRSEPGLGAEE 75 Query: 180 ALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + V+++ ++ +T L + +N K R +L+ + E Sbjct: 76 PAGGEVALG-TGQGVLERARKRCANGDYEGGLTVLLHEYRNGK-----RDPVLLRFAAEC 129 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMA-----SICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + D I S L A + + K +A L K+ +++P Sbjct: 130 FEHSNRYQEGADFIASALLEQEFPPADQAHLQFVLSGWYLQLGKTNEARQALWKVQRLDP 189 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL--VIVSKIALEMGSIDQAHAKAM 349 H Y L R L E +S ++++ L + QA +A Sbjct: 190 H------YPGLQG--------RLQHLLPAQTEKPKSRYGLLLASGQLSEEQLQQATEEAN 235 Query: 350 L 350 Sbjct: 236 K 236 >gi|16127050|ref|NP_421614.1| TPR domain-containing protein [Caulobacter crescentus CB15] gi|13424424|gb|AAK24782.1| TPR domain protein [Caulobacter crescentus CB15] Length = 526 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 77/275 (28%), Gaps = 17/275 (6%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEK-LEMMLQIPATREF 155 + A + LL A + + + A + + P R Sbjct: 43 DNGRAADALRLTTGPVALPQAS-AGLLMAHAAALKALGRTDEALTFNRRAVARAPGDRF- 100 Query: 156 AVYSLYFESCRIGDL---NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 S Y + +GDL + A+ A K + + D P V + + + A Sbjct: 101 ---SWYNLAATLGDLALDDEAEGAARKTIALGLDVPEVRLVLGKALQGLHRYDEAEATFV 157 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L L G + ++ + + L Sbjct: 158 RALAARP---SDATVHLNLAQLRWMRSGRSDEALAPLDAAIARHPADVTLRTIRSNVLTF 214 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINKESVESLV 329 A+ LE P I + + L A + ++ES Sbjct: 215 AGDHAGADATLEDALTRAPGDLAVRIAAARAAGAVGDRARMLAHAREAARLAPGALESQT 274 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 ++ + L G D A A + AP + L+L Sbjct: 275 VLCEALLAAGQADVAARTAEALVAAAPDDQYALVL 309 >gi|322796271|gb|EFZ18847.1| hypothetical protein SINV_80216 [Solenopsis invicta] Length = 1022 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 86/267 (32%), Gaps = 13/267 (4%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + + + V L + A E L Sbjct: 152 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 210 Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 Q+ A+ L + + +KA I P V + + K++ Sbjct: 211 QLDGQCVGALVGLSVLKLNQQQPESIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 270 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263 ++ + L + E RA + +GD ++ ++ + ++ Sbjct: 271 NK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 329 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317 + + + A EK+ K P + ++Y + S++ K ++ Sbjct: 330 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 389 Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344 E + VE+ + +++I LE ++ A Sbjct: 390 TEQFPDDVEAWIELAQI-LEQSDLNAA 415 >gi|315633976|ref|ZP_07889265.1| lipopolysaccharide N-acetylglucosaminyltransferase [Aggregatibacter segnis ATCC 33393] gi|315477226|gb|EFU67969.1| lipopolysaccharide N-acetylglucosaminyltransferase [Aggregatibacter segnis ATCC 33393] Length = 396 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 44/193 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY------NIAHEKLEMMLQIPA 151 + A ++H + + E LL Q + + + A +M+ P Sbjct: 91 GEVDRALRIHQALDNSPYYTFEQ--KLLAKQ--QLAKDFMAVGFFDRAEHLYILMVDEPE 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 +A AL A++ Q W +AI Sbjct: 147 ------------------------FAEAALQ--------QLAIIYQKTKE--WKKAINVA 172 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K + + N + N + +++LK+ + ASI A I Sbjct: 173 EKLAKISPKKNHIELAHYYCEYVRNLPQDSKENPQQILLQALKVSPSCARASIMLADLAI 232 Query: 272 SQNKKRKAEVILE 284 Q + A ILE Sbjct: 233 KQENYKSAVDILE 245 >gi|94969466|ref|YP_591514.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94551516|gb|ABF41440.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 448 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 5/173 (2%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 H +++LL + + A E L + +Y+L + A Sbjct: 268 LDAHQPEVLFLLGA-AYTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRA 326 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 KAL P+ + + + + AI + + R A Sbjct: 327 IDSYQKALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATA-- 384 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +KG+ + + E++KL + A SL+ N A+ E+ Sbjct: 385 --LFNKGNFKEAAENYREAVKLKPDFAHAHYNLGMSLLRLNDAAGAKSEFEEA 435 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 63/196 (32%), Gaps = 7/196 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 ++G N A KAL P + + Q AK++ A N+ + ++ Sbjct: 216 QQLGRTNEAITEYEKALKGDPKSAVAWAQLGQTQYAAKQYPEAEVSFNKSLH--LDAHQP 273 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L+ + ++G + H + L L ++ + +Q + +A + Sbjct: 274 EVLFLLGAA--YTEQGKSKEAMHSYEKGLALKPDNPDGLYNLGHAYETQKEYPRAIDSYQ 331 Query: 285 KIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 K P H L S + +L + + + G+ Sbjct: 332 KALAARPEFTHALAGLGACQLASNKLDDAIATYRKLVPMQSDDPGIRFNFATALFNKGNF 391 Query: 342 DQAHAKAMLAMKIAPR 357 +A A+K+ P Sbjct: 392 KEAAENYREAVKLKPD 407 >gi|87306790|ref|ZP_01088936.1| cell division cycle protein 48-related protein [Blastopirellula marina DSM 3645] gi|87290163|gb|EAQ82051.1| cell division cycle protein 48-related protein [Blastopirellula marina DSM 3645] Length = 446 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 7/159 (4%) Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---I 295 D +A+ A+E + ++I + A++L + + E L++ P + Sbjct: 2 SNDAVAALRAALE---VSPHNIPLRLHLAQTLAELGRTAEVEAELKEALTYEPQNAEIKL 58 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 A + + + L + + + S E+ V+++++ L G + A A A++ Sbjct: 59 ALARLFVRTAKSSQALVILEEIAQRGEASAEARVVLARLLLAEGEVRSAVAHYKEAIETD 118 Query: 356 PRKEIFLLLAQIEQANS-HNTDKILYWTQSALHAMPDPL 393 P E L AQ+ + ++D + A P+P+ Sbjct: 119 PDVEDAELSAQLGVGAAWQDSDVSEGRLREMADAAPEPV 157 >gi|163847235|ref|YP_001635279.1| hypothetical protein Caur_1672 [Chloroflexus aurantiacus J-10-fl] gi|222525076|ref|YP_002569547.1| tetratricopeptide repeat-containing protein [Chloroflexus sp. Y-400-fl] gi|163668524|gb|ABY34890.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus J-10-fl] gi|222448955|gb|ACM53221.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl] Length = 520 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 15/171 (8%) Query: 200 LAKEWSRAITFLNQKKKNA--------KEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 L ++ AI A + + R RAI+ + A + + + +E Sbjct: 41 LRAAYADAIEHFKAALIAAYVDGEEQAQIYERERAIIYLYIGNSLAFQDHWEEALREYLE 100 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN 306 +++ A + + + +A ++ + NP H + Y + ++ Sbjct: 101 AVQTDPQLAEAHYNLGVAFAALGQIDRAIAAFKETLEHNPNLYEAHFALGRCYQRI--DD 158 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ E + + G+ + A A+++ P Sbjct: 159 AGRAYIHFSSACNARPQAAEPRYYMGLMHQSHGAHELAQRCFAEALRVEPT 209 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 47/300 (15%), Positives = 87/300 (29%), Gaps = 50/300 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ-------QHTFHNEYLVYLLE----------VQIALAE 133 GLM + LA++ + + +E LV E Q + Sbjct: 184 GLMHQSHGAHELAQRCFAEALRVEPTFVSPEPLPDEPLVQRSEEEVAQWYYRLSQALKQQ 243 Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD----ISPDAPW 189 A +LQ A Y L G+L + QR +A I P Sbjct: 244 GYEEEAERIYRALLQWRPQEYAARYLL-------GNLLARQRRFEEAYAEYEQIPPQHRH 296 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-------KEWNRNRAILLIARSLENADKGDM 242 +A ++ AI L +K K A N + L + D G Sbjct: 297 YVDARLR--------MSAILRLQKKPKQAYELLFACARLNPHHGQLFLHMGKLLYDMGMN 348 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIAN 297 + +++L A + + A K ++ P H ++ Sbjct: 349 TQAARAFERAVQLMPTDAQAHYLLGFVYNTLGRDTWALAAWRKAVQLAPEAHSLRFDLGY 408 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +Y + ++ E + +E+ ++ E+ +A ++ PR Sbjct: 409 MYIRRGRYDLAA--AEFQQVLEQWPDDLETQFMLGLCYKELLEPARAIPLFEKVLRRNPR 466 >gi|332705763|ref|ZP_08425839.1| hypothetical protein LYNGBM3L_10980 [Lyngbya majuscula 3L] gi|332355555|gb|EGJ35019.1| hypothetical protein LYNGBM3L_10980 [Lyngbya majuscula 3L] Length = 303 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 14/144 (9%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-- 181 +L Q+ A + +L A+ L + +A L Sbjct: 135 VLLAQVKQQIGDREGAAQAYRDILNAKPGDMNALQGLVSLLTQENRPEAAIGLLQDTLKS 194 Query: 182 -----DISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 +I P + V + Q Y K + A +Q K ++ R ++A++ Sbjct: 195 SQQVNEIKPGSIDVISVQLLLGQVYANQKRYDEATAIYDQAIKGNQDDWRP----VLAKA 250 Query: 234 LENADKGDMIASYHDAIESLKLCD 257 + ++G+ + ++ L Sbjct: 251 MIFQEQGNTEKAKPLFDQATSLAP 274 >gi|167568720|ref|ZP_02361594.1| TPR domain protein [Burkholderia oklahomensis C6786] Length = 606 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 109/336 (32%), Gaps = 58/336 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 51 DAPQATFAPALPEEQKDLPNVALTSQIVYQVLAAEVALQRNLPAPAYQTYLALARDTRDP 110 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP A V A++ VL + + A L Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWREYSPSSPRAAQVDAALL---VLGGKPADAQPML 167 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 Q+ A NR AI+ + A + + Sbjct: 168 AQELARATGENRGEAIIALQALLSRGPNRVGGLTVLQDLLKNDMNRPEARLAIARQQLAT 227 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L+L + + A++ L +A ++ V +P+ Sbjct: 228 DDKGGATQSLKEALRLKPDYLPAALM----LSQMGPNERAAGVVSFEKFVQQNPKSRDGR 283 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 284 LALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVKV 343 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 A +K + ++ LAQI +++ W Sbjct: 344 AQKKPGADVGQAYVYLAQIALDQNNDALAAQ-WLDK 378 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 78/243 (32%), Gaps = 45/243 (18%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q+ LA+ + + A ++ E M + ++ + +L + L+ A Y + + Sbjct: 283 RLALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVK 342 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++ +KK + + L + D+ + Sbjct: 343 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNND 369 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----- 297 + + + + A + A+ L Q K +A +L + +P + A Sbjct: 370 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKAEEARKLLANLQVSDP-RDAAVIARTD 428 Query: 298 ---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++T + +L +A E + + + ++G + L M+ Sbjct: 429 ASILFTSKRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRA 485 Query: 355 APR 357 P Sbjct: 486 QPD 488 >gi|159463248|ref|XP_001689854.1| predicted protein [Chlamydomonas reinhardtii] gi|158283842|gb|EDP09592.1| predicted protein [Chlamydomonas reinhardtii] Length = 698 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 28/281 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPATREF 155 + LAR+ + + + + ++ + R+ A + IP Sbjct: 226 GEVGLARRCYERAVDELGEDAQTEEFFIKFAEFEEKAREVERARAIYRYALDHIPKASAP 285 Query: 156 AVYSLYFESCRI-GDLNSAQRYA--------TKALDISPDAPWVTEAVVQQYVLAKEWSR 206 ++Y + + GD ++ + + SP ++ + R Sbjct: 286 SLYQRFVAFEKQHGDREGIEQVVVSKRRFQYEEDIAKSPYNYDTWFDYIKLEEGTGDIER 345 Query: 207 AITFLNQKKKNAKEWN------RNRAILLIARSL-ENADKGDMIASYHDAIESLKLCD-- 257 + + R L + +L E D D + L L Sbjct: 346 TREVYERAVAQLPPSSAEKRFWRRYIYLWVKYALFEELDCADPDRTRDVYRAVLDLIPHR 405 Query: 258 --NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 I AAK I Q +L + + P ++ Y L E T+G + R Sbjct: 406 QFTFAKIWIMAAKFEIRQRNVEGCRKLLGRALGLCPKEKLFKAYIEL--ELTMGNVDRVR 463 Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +L E +V + V + + ++G +A A LA+ Sbjct: 464 KLYEKYLEWRPSNVGAWVRFADLERQLGETGRARALYELAI 504 >gi|187920514|ref|YP_001889546.1| cellulose synthase operon C domain-containing protein [Burkholderia phytofirmans PsJN] gi|187718952|gb|ACD20175.1| cellulose synthase operon C domain protein [Burkholderia phytofirmans PsJN] Length = 1569 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 59/207 (28%), Gaps = 17/207 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL SA L PD P + A+ + Y A + A+ + + Sbjct: 711 RQRGDLASAYDVIAPWLAAMPDNPDLQAALGRLYSTAGDDRNALASYRVALQRKPDDLNL 770 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + A + + A ++L + ++ K A L+ Sbjct: 771 LQATISAAAGAKQFS----YAETLAKQALTAAPADPGVLATVGRMYRAEGKLSLASTYLQ 826 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSK------ 333 + P +AN + V + ++R E Sbjct: 827 RSLVAANTPLMANA--PRSPASNVPRGWEVAMRRIGATPLPGTNPFEGKTATVTPTDADN 884 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEI 360 AL GS + A + + P + + Sbjct: 885 AALAGGSYNAARSALPYSQSSLPTQTV 911 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 88/274 (32%), Gaps = 35/274 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G M +A + A + + ++ + + + L+ A A + + Sbjct: 407 GEMLLANGDPSGAEQAYRMALRRQADNPDAVRGLVGALAAQGRGD--EALQFANQLNTEQ 464 Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 ++ + + GDL SA+ AL +PD PW+ + + YV Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + ++ + L A +L +A+ D A I Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSAGLAQLER--------IPV 572 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + ++ A L+ V+ ++A + T L E + Sbjct: 573 A-----------QRTDAMTTLQHRLWVHQQADLAT--RMARNGQTQQALATLQAAEPVAG 619 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 S E + +++ + G ++A AM AP Sbjct: 620 NSPELIGVIAAAYSQAGDPNRALGLVRAAMNAAP 653 >gi|13543269|gb|AAH05801.1| Prpf6 protein [Mus musculus] Length = 493 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 36/198 (18%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + GD+ +A+ A Sbjct: 131 RAAYFEKNH-GTRESLEALLQRAVAHCPKAEVLWLMG-AKSKWLAGDVPAARSILALAFQ 188 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--------------NRAIL 228 +P++ + A V+ E+ RA L + + +A + A Sbjct: 189 ANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNISAAQE 248 Query: 229 LIARSLENADKGD---------------MIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 L +L + + M + + LK C +S + ++ Sbjct: 249 LCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 308 Query: 274 NKKRKAEVILEKIWKVNP 291 + +A ILEK NP Sbjct: 309 GQLTRARAILEKSRLKNP 326 >gi|46122229|ref|XP_385668.1| hypothetical protein FG05492.1 [Gibberella zeae PH-1] Length = 823 Score = 46.5 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 91/260 (35%), Gaps = 15/260 (5%) Query: 136 YNIAHEKLEMMLQIPATRE--FAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y A + M +R VYS + + R DL+ A + +D + +P Sbjct: 546 YAEAEKFFRRMRVQAPSRLEDMEVYSTILWHLRRETDLS---FLAHELVDSAWLSPQAWC 602 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ + LA++ +A+ + + ++ A + E + + ++ Sbjct: 603 ALGNAWSLARDHEQALKCFKRATQLDPKF----AYAFTLQGHEYVTNEEYDKAQTAYRQA 658 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-- 310 + A + KA +NP+ + + E Sbjct: 659 ISADKRHYNAYYGIGRVQERLGAYDKAYTHFHAAQSINPNNAVLITCIGTVLEKQKQIMP 718 Query: 311 -LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIE 368 L+ + E+ + ++ ++ L +G ++QA + M+ +AP + LL ++ Sbjct: 719 ALQAYSKAVELAPRAAQTRYKKARALLAVGQLEQAQKELMILKDLAPDEATVHFLLGKLY 778 Query: 369 QANSHNTDKILYWT-QSALH 387 ++ + ++T AL Sbjct: 779 RSMGEKQLSVRHFTIALALD 798 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 59/185 (31%), Gaps = 20/185 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q + L+ + +Y+ A + A Y Sbjct: 613 DHEQALKCFKRATQLD--PKFAYAFTLQGHEYVTNEEYDKAQTAYRQAISADKRHYNAYY 670 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYV----LAKEWSRAITFL 211 + R+G + A + A I+P+ + V+++ + +S+A+ Sbjct: 671 GIGRVQERLGAYDKAYTHFHAAQSINPNNAVLITCIGTVLEKQKQIMPALQAYSKAVELA 730 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + + + RA+L + G + + + + L + K Sbjct: 731 PRAAQTR--YKKARALLAV---------GQLEQAQKELMILKDLAPDEATVHFLLGKLYR 779 Query: 272 SQNKK 276 S +K Sbjct: 780 SMGEK 784 >gi|42526563|ref|NP_971661.1| putative lipoprotein [Treponema denticola ATCC 35405] gi|41816756|gb|AAS11542.1| lipoprotein, putative [Treponema denticola ATCC 35405] Length = 598 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTH--LLSEN 306 E+ KL S++A NK +A + +K W+++ +P Y H S N Sbjct: 196 EAQKLRPQSVLAYYLLGLYKEKTNKLTEAVTLYQKAWQLDSSCYPA-GFKYGHFAAESGN 254 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 LK A L + ++ E ++ ++ + +++A + +K P LLL Sbjct: 255 GTETLKIADALNSLYNDNTEVKLLYAQAHIAKNDLNKASENIVSVLKKEPENISALLL 312 >gi|55981628|ref|YP_144925.1| TPR repeat-containing protein [Thermus thermophilus HB8] gi|55773041|dbj|BAD71482.1| tetratricopeptide repeat family protein [Thermus thermophilus HB8] Length = 453 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 18/227 (7%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ +A + AL+ P + + + RA + + + ++ Sbjct: 171 GEREAAVPHLYAALNREPGRAEAWDLLARVLAEVGLTDRARREVERGLEAVQDPKGK--A 228 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LL+ R + + + E+L L + A+ + + ++ L++ + Sbjct: 229 LLLLRKGTLVEDPEPL-----WREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAY 283 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHA 346 PE+A + KE+ + ++ A +G +A Sbjct: 284 AKGQDPEVALALAAAYLKAKD-----YANAYRYAKEAGPAGAFLQAQAAQGLGRRQEALK 338 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +P+ +E+ Q+A A DP Sbjct: 339 LLEGLA--SPQALALRGSLLLEEGQGEEAVAA---LQAAYEATRDPQ 380 >gi|327303038|ref|XP_003236211.1| pre-mRNA splicing factor prp1 [Trichophyton rubrum CBS 118892] gi|326461553|gb|EGD87006.1| pre-mRNA splicing factor prp1 [Trichophyton rubrum CBS 118892] Length = 938 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 108/300 (36%), Gaps = 42/300 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G++++ +R +A + Sbjct: 579 AADLERNHGTKESLWQLLEKAVEACPRSEELWMQ-LAKEKWQAGEIDNTRRVLGRAFHQN 637 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------WNRNRAILLI 230 P+ + A V+ + +A L+ ++ A NR+ A+ L+ Sbjct: 638 PNNEDIWLAAVKLEADTNQIEQARELLSTARREAGTDRVWIKSVAYERQLGNRDHALDLV 697 Query: 231 ARSLEN---------------ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + L+ G + + + C S+ + A++ Sbjct: 698 NQGLQLYPKADKLWMLKGQIYESDGQIQQAREAYGTGTRACPKSVPLWLLASRLEEKAGV 757 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 KA +L++ P+ A ++T + E + +A L +E S ++ S+ Sbjct: 758 VVKARSVLDRARLAV--PKNAELWTESVRVERRANNMSQAKSLMSKALQEVPNSGLLWSE 815 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 LE + + + K+ +F+ +A+I +K + W + A+ A D Sbjct: 816 SIWHLEPRTHRKPRS-LEAIKKVDNDPILFVTVARIFWGERR-LEKAMTWFEKAIVANSD 873 >gi|323449294|gb|EGB05183.1| hypothetical protein AURANDRAFT_54803 [Aureococcus anophagefferens] Length = 897 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 88/264 (33%), Gaps = 14/264 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A + + + + L + Q N A E +M L I A Sbjct: 61 GDVRGAMQFYLKAIKCKPRFGDAYNNL--ASAHMHLGQTNDAIETFQMGLVIDPGLVDAH 118 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L G L +A+R +A+ ++P + + + S AI + + + Sbjct: 119 CNLGNLFKAQGKLAAARRCYLEAIRLNPGFAIAWSNLAGIFKDEGQLSTAIAYYREAIRL 178 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A + ++G+ + + +++L + +A L++ N + Sbjct: 179 CPPF----ADVYSNLGSAMQEQGNFVEARQCYQTAIRLRPDFAIAHGNLGSCLLASNDAK 234 Query: 278 KAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A L ++ P+ P+ + N L + + + + + Sbjct: 235 GAVRALRHAVQLEPNFPDAYNNLGNA---LRKTFMREAISCYRTALHLKPDHPHAYSNLG 291 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + G + +A + A ++ P Sbjct: 292 NAMRDRGLVREAIHCNVTAARLMP 315 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 66/202 (32%), Gaps = 11/202 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +GD+ A ++ KA+ P + ++ + + AI Sbjct: 53 LANALKELGDVRGAMQFYLKAIKCKPRFGDAYNNLASAHMHLGQTNDAIETFQMGLV--I 110 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + + +G + A+ +E+++L +A A + + A Sbjct: 111 DPGLVDAHCNLGNLFK--AQGKLAAARRCYLEAIRLNPGFAIAWSNLAGIFKDEGQLSTA 168 Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + ++ P P A++Y++L N V + + + + + Sbjct: 169 IAYYREAIRLCP-P-FADVYSNLGSAMQEQGNFVEARQCYQTAIRLRPDFAIAHGNLGSC 226 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 L A A+++ P Sbjct: 227 LLASNDAKGAVRALRHAVQLEP 248 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 84/262 (32%), Gaps = 24/262 (9%) Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPD 186 + + A + + + P + L D A R A+ + P+ Sbjct: 192 AMQEQGNFVEARQCYQTAIRLRPD--FAIAHGNLGSCLLASNDAKGAVRALRHAVQLEPN 249 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + + AI+ + A + ++ D+G + + Sbjct: 250 FPDAYN-NLGNALRKTFMREAISCYRTALHLKPD--HPHAYSNLGNAM--RDRGLVREAI 304 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 H + + +L + A L Q + +A + ++ P+ A YT+L Sbjct: 305 HCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALD--PDFAEAYTNL-GNA 361 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA--KAMLAMKIA-PRKEIFLL 363 +K +I E+ ++ + + G+ + A + LA++ P LL Sbjct: 362 LDDAIKCYTTALKIAPGLAEAHAALAAVHGDGGNYEDAIMCYERALALRPHFPDAFAGLL 421 Query: 364 LAQIEQANSHNTDKILYWTQSA 385 A+ D + WT A Sbjct: 422 QAK---------DFVCDWTSRA 434 >gi|255325863|ref|ZP_05366955.1| DNA repair protein RadA [Corynebacterium tuberculostearicum SK141] gi|255297075|gb|EET76400.1| DNA repair protein RadA [Corynebacterium tuberculostearicum SK141] Length = 456 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 1/95 (1%) Query: 395 ISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNN 454 S+ GY+S WL P + E + P + + + + + + PA + + Sbjct: 11 CSECGYVSPKWLGRCPDCGSWGTLEERAPVVAGPGTAGTSASKGVAPSSPAQPITKIGAQ 70 Query: 455 GKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGI 489 K I ++ + I P + +PG+ Sbjct: 71 ATKTVRTGIGELDRVLGTGIVPGS-VVLMAGEPGV 104 >gi|91778084|ref|YP_553292.1| putative cellulose synthase operon protein C [Burkholderia xenovorans LB400] gi|91690744|gb|ABE33942.1| Putative cellulose synthase operon protein C [Burkholderia xenovorans LB400] Length = 1588 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 58/207 (28%), Gaps = 17/207 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL A L PD P + A+ + Y A + A+ + + Sbjct: 711 RQRGDLAGAYDVIAPWLAAMPDNPDLQAALGRLYSTAGDDRNAVASYRVALQRKPDDLSL 770 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + A + + A ++L + ++ K A L+ Sbjct: 771 LQATISAAAGAKQFS----YAESLATQALNAAPGDPGVLATVGRMYRAEGKLSLASTFLQ 826 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSK------ 333 + P +AN + V + ++R E Sbjct: 827 RSLVAANTPLMANA--PRNPASNVPRGWEVAMRRIGATPLPGTNPFEGKTATVTPTDADN 884 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEI 360 AL GS + A A + P + + Sbjct: 885 AALAGGSYNAARASLPYSQSSLPTQTV 911 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 88/274 (32%), Gaps = 35/274 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G M +A + A + + ++ + + + L+ A A + + Sbjct: 407 GEMLLANGDPVGAEQAYRMALRRQADNPDAVRGLVGALAAQGRGD--EALQFANQLNAEQ 464 Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 ++ + + GDL SA+ AL +PD PW+ + + YV Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + ++ + L A +L +A+ D + I Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQL--------DRIPL 572 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + ++ A L+ V+ ++A S T L E + Sbjct: 573 A-----------QRTDAMTTLQHRLWVHQQADLAT--RMARSGQTQQALATLHAAEPVAG 619 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 S E + +++ + G ++A AM AP Sbjct: 620 NSPELIGVIAAAYQQAGDPNRALGLVRAAMNAAP 653 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 54/199 (27%), Gaps = 19/199 (9%) Query: 97 AHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-- 153 A + + A S+ L + + M+Q +T Sbjct: 218 AGDSTVGASAKKSWRQALLWLDARPSDAALYQAYLQTATDDAAVKARFDSMVQQDSTARA 277 Query: 154 ------EFAVYSLYFE----SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + D+ +A+ + L SP+ + + + Sbjct: 278 RAQENAAVDARGRAIADGFAALDRNDVATARAKFSSVLATSPNDTDALGGMGIAALKQER 337 Query: 204 WSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ A L + +N A+ + ++ G+ + ++ L Sbjct: 338 FAEARNDLERASRNGNPARWKTALDSATYWTYTSDAIGARSNGEFAKAKSLFERAIALNP 397 Query: 258 NSIMASICAAKSLISQNKK 276 + + A + + L++ Sbjct: 398 SDVTAQVLLGEMLLANGDP 416 >gi|83746558|ref|ZP_00943608.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum UW551] gi|207742243|ref|YP_002258635.1| hypothetical protein RSIPO_00426 [Ralstonia solanacearum IPO1609] gi|83726692|gb|EAP73820.1| Tetratricopeptide repeat family protein [Ralstonia solanacearum UW551] gi|206593631|emb|CAQ60558.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 642 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 78/266 (29%), Gaps = 47/266 (17%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A A ++++P + + V +WS L + R AIL Sbjct: 138 APSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRADAIL 197 Query: 229 --------------------------------LIARSLENADKGDMIASYHDAIESLKLC 256 +A + D + + +L+L Sbjct: 198 QLQQQMSKSNDPVGAVSALQRLTVHDAQRPETHLALARAKVVAKDNTGALSELDTALRLR 257 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKL 311 A+I AA+ L + + A L K P H +A +Y + ++N + Sbjct: 258 PGYEDAAILAAE-LRADSNPDAAIAGLRTFLKAAPASLDGHLALARLYL-VNNQNDQARA 315 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI------FLLLA 365 + + +I + + + L+ D A + A + + LA Sbjct: 316 Q-FEAIRKIAPNDARIPLALGLLNLQQRQYDAAERYLKEYIAQAAQSPSLSPEPGYQGLA 374 Query: 366 QIEQANSHNTDKILYWTQSALHAMPD 391 Q+ + H+ + W A Sbjct: 375 QVAE-EKHDYAGAITWLDKIAGASNG 399 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 13/173 (7%) Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L Q ++ + R I + R+ + A ++L S+ A + Sbjct: 116 LAQDTRDPRFAQRATEIAFLTRA--------PSQALTAARLWVELAPTSMPARQVQQLLM 167 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325 ++ + + E +L+ + A+ L S + VG + RL + + Sbjct: 168 VATGQWSEVEPMLQAQLNKVSPGQRADAILQLQQQMSKSNDPVGAVSALQRLTVHDAQRP 227 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 E+ + +++ + A ++ A+++ P E +LA +A+S+ I Sbjct: 228 ETHLALARAKVVAKDNTGALSELDTALRLRPGYEDAAILAAELRADSNPDAAI 280 >gi|257075491|ref|ZP_05569852.1| TPR repeat-containing protein [Ferroplasma acidarmanus fer1] Length = 516 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 12/198 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 D A +A+ I P + + + ++ I L + + Sbjct: 21 EADDFAGALEAINRAISILPRNVDLHDFKSDILFHSGDFEETIKELE----FIETLDPGD 76 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A SL G+ + A +++K+ ++ + AK+L + + A Sbjct: 77 ASHYSMESLCYLQMGEDEKALELADKAIKVDNDYEFSYYNRAKALNNLGRTEDAISAYRL 136 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM-G 339 + NP H ++A +Y + + K + ++ ++ L G Sbjct: 137 SLEKNPSDPDGHRDLAELYLDAGNYKMAER--ELKLSLRFRKNDKITNDLMVELKLATGG 194 Query: 340 SIDQAHAKAMLAMKIAPR 357 + + A A Sbjct: 195 AFEFTKALLDAFKNTADT 212 >gi|15676254|ref|NP_273388.1| hypothetical protein NMB0339 [Neisseria meningitidis MC58] gi|7225559|gb|AAF40782.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|316984343|gb|EFV63317.1| tetratricopeptide repeat family protein [Neisseria meningitidis H44/76] gi|325132894|gb|EGC55571.1| hypothetical protein NMBM6190_0274 [Neisseria meningitidis M6190] gi|325134920|gb|EGC57552.1| hypothetical protein NMBM13399_0337 [Neisseria meningitidis M13399] gi|325138879|gb|EGC61429.1| hypothetical protein NMBES14902_0323 [Neisseria meningitidis ES14902] gi|325140988|gb|EGC63494.1| hypothetical protein NMBCU385_0299 [Neisseria meningitidis CU385] gi|325143053|gb|EGC65404.1| hypothetical protein NMB9615945_0384 [Neisseria meningitidis 961-5945] gi|325199533|gb|ADY94988.1| conserved hypothetical protein [Neisseria meningitidis H44/76] Length = 389 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 109/356 (30%), Gaps = 67/356 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 AR++ V + ++ L ++ + + A ML P T Sbjct: 57 GRAARELAEVVDGRPQSYDLNLTL---GKLYRQRGENDKAINIHRTMLDSPDT--VGEKR 111 Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFL 211 L+ + G ++ A++ L + A + ++ Y ++W +A+ Sbjct: 112 ARVLFELAQNYQSAGLVDRAEQIF---LGLQDGKMAREARQHLLNIYQQDRDWEKAVETA 168 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLC------------ 256 + + + A + K + + A+E+ K C Sbjct: 169 RLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTRANMILGDIEH 228 Query: 257 -DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVGKL--- 311 + A++ A + I Q ++ EK + Y E + +L Sbjct: 229 RQGNFPAAV-EAYAAIEQQNHAYLSMVGEK---------LYEAYAAQGKPEEGLNRLTGY 278 Query: 312 -KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLL----LA 365 + L+ IN +SL++ + +A A+ ++ P ++ L L+ Sbjct: 279 MQTFPELDLINVVYEKSLLLKCE--------KEAAQTAVELVRRKPDLNGVYRLLGLKLS 330 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + A + D + L ++ + + S W P F Sbjct: 331 DMNPAWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWQTF 382 >gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110] gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110] Length = 458 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 54/165 (32%), Gaps = 9/165 (5%) Query: 129 IALAERQYNIA-HEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A + E + P R + ++ D + A A +A+ + P Sbjct: 181 TYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVAD--AAEAIRLDPK 238 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + ++ +AI +Q + A + N R KG+ A+ Sbjct: 239 VPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPKPN-----FFTNRGDSYQFKGEFGAAL 293 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D +LKL N A ++RKA E K++P Sbjct: 294 SDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDP 338 >gi|109897526|ref|YP_660781.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c] gi|109699807|gb|ABG39727.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c] Length = 918 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 101/301 (33%), Gaps = 31/301 (10%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL+ +++ + + S ++ T +E L Q + A + Sbjct: 400 LREGLVKLSSGDQSGIESLESAIAIDATL-SEAWSLL--AQAHMQANDSEQALSIAKRWQ 456 Query: 148 QIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + L ES ++ + A+ K L+++PD ++ K + Sbjct: 457 ETNQID-----GLVLESYLLQQLNNNVEARATLQKVLELAPDNYPAMRFLMLMNAREKRF 511 Query: 205 SRAITFLNQKK--KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM- 261 A T + N E + +I +++ D + +++ Sbjct: 512 DEARTLAEKLLLSSNNAEGKFQLVLTIINLAIQQDDLKSIETLLQSLLDNRPTDVEEEPL 571 Query: 262 -ASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRA 314 + A Q + +KA +L+ I + ++ E+ Y + ++ Sbjct: 572 ELKVGLATIFNYQGEYQKALTVLKDIKNQKDFFVLS---ELGQTYIEM--DDFRNAKLTF 626 Query: 315 LRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 L I + S + ++++ L + + + A ++A A+ PR + + A I Sbjct: 627 ETLVNIFPRNTLSWNKQINLLNQYGLHVEAAELA-SRAETAIPHDPRLTVLNIRALIRAG 685 Query: 371 N 371 Sbjct: 686 E 686 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 39/103 (37%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A + +L + + + + R ++ A A +A+ I P+ Sbjct: 779 AEYYTRNGALDAAEIYYKGLLDMNPKDFVTLNNYSALAIRKEEIPLAIELAQQAIQIQPN 838 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 +P+ + + ++S A+T++ + + N L+ Sbjct: 839 SPYAMDTLGWALFRNNQFSDALTYIKKANAELPKNNEITLHLI 881 >gi|332025552|gb|EGI65715.1| Anaphase-promoting complex subunit 7 [Acromyrmex echinatior] Length = 572 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 57/190 (30%), Gaps = 26/190 (13%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKA 180 L Q A + L E + D A + A Sbjct: 320 ANTLTAQALNLNPNDIEATI---------------LRGNLLIEQKKYQD---ALFFFRHA 361 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P + +V V A+ + K R +L + S+ D Sbjct: 362 VQLKPYRYEPHKGLVDCLVGMHRLREALNIASSSCKQLGHTTR---VLTLYASVLMKDPV 418 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIA 296 + + + ++L + + A A+ + A +LE+ +++ H + Sbjct: 419 SVSKAKNLLEKALSQDEVYLPAVYLLAEIYEQEMNLEAAIELLERQVEIHSTCKLHQTLG 478 Query: 297 NIYTHLLSEN 306 +++ + +E Sbjct: 479 DLWARMHNEE 488 >gi|22001528|sp|O82861|BCSC2_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|3298351|dbj|BAA31465.1| cellulose synthase subunit C [Gluconacetobacter xylinus] Length = 1326 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 85/289 (29%), Gaps = 26/289 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + A + + + + + L+ L ++ +A+ A + L + + Sbjct: 418 TGQVAAAEQEYRGILSREPNNQLALMGL--ARVDMAQGNTAEARQLLSR-VSPQYASQVG 474 Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 V L + + D +A+ +P PWV + + + A + Sbjct: 475 EIEVSGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQP 534 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS-ICAAKSLI 271 N +A +L N + + L + A A + I Sbjct: 535 ILANPVTAQDRQAGILYTYGSGNDAMTRQLLA--------GLSPADYSPAIRSIAEEMEI 586 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 Q+ + ++ NP P I + + T + L + V + + + Sbjct: 587 KQDLASRLSMV------SNPVPLIREALS--QPDPTGARGVAVADLFRQRGDMVHARMAL 638 Query: 332 SKIALEMGSI--DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + DQ + A MKI+ LLA + Sbjct: 639 RIASTRTIDLSPDQRLSYATEYMKISNPVAAARLLAPLGDGTGSGAGNA 687 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 12/161 (7%) Query: 133 ERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + + A + + LQI L S R GD A RY +A+ P Sbjct: 304 AGRLSAAEQSFQSALQINSHDADSLGGMGLV--SMRQGDTAEAHRYFEEAMAADPKTADR 361 Query: 191 TEAVVQQYVLAKEWSRAITFL------NQKKKNAKEWNR--NRAILLIARSLENADKGDM 242 + ++ +++ + K+K A + + + G + Sbjct: 362 WRPALAGMAVSGDYAAVRQLIAAHQYTEAKQKLATLARQPGQYTGATLMLADLQRSTGQV 421 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + L N+ +A + A+ ++Q +A +L Sbjct: 422 AAAEQEYRGILSREPNNQLALMGLARVDMAQGNTAEARQLL 462 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 110/351 (31%), Gaps = 57/351 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GLM+ A+ ARK+ + V + + A ++ +L P Sbjct: 480 GLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQPILANP 539 Query: 151 AT---REFAV---YSLYFESCRIG--------DLNSA-QRYATK-------ALDIS---- 184 T R+ + Y ++ D + A + A + A +S Sbjct: 540 VTAQDRQAGILYTYGSGNDAMTRQLLAGLSPADYSPAIRSIAEEMEIKQDLASRLSMVSN 599 Query: 185 --PDAPWV----------TEAVVQQYVLAKEWSRAITFL------------NQKKKNAKE 220 P AV + + A L +Q+ A E Sbjct: 600 PVPLIREALSQPDPTGARGVAVADLFRQRGDMVHARMALRIASTRTIDLSPDQRLSYATE 659 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIM-ASICAAKSLISQNKKRK 278 + + + AR L G + + + E ++ M S+ + L + + + Sbjct: 660 YMKISNPVAAARLLAPLGDGTGSGAGNALLPEQMQTLQQLRMGISVAQSDLLNQRGDQAQ 719 Query: 279 AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A L + +P P++A + L+ L + N + +++ + A Sbjct: 720 AYDHLAPALQADPEATSPKLALARLYNGHGKPGKALEIDLAVLRHNPQDLDARQAAVQAA 779 Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + A AM ++ +P +L +A +QA+ H I + A Sbjct: 780 VNSNHNSLATRLAMDGVQESPMDARAWLAMAVADQADGHGQRTIED-LRRA 829 >gi|255068440|ref|ZP_05320295.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256] gi|255047326|gb|EET42790.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256] Length = 389 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 106/352 (30%), Gaps = 59/352 (16%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 AR++ + QQ ++ L ++ + + A + +L P T Sbjct: 57 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQALLDSPDT------- 106 Query: 160 LYFESCRIGDLNSAQRY-----ATKALDISPDA------PWVTEAVVQQYVLAKEWSRAI 208 E AQ Y +A I + ++ Y ++W +AI Sbjct: 107 -VNEKRARVLFELAQNYQSAGLVDRAEQIFIGLQEGNMAREARQHLLSIYQQDRDWEKAI 165 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASIC 265 + + + A + K ++ A+ A+++ K C A++ Sbjct: 166 ETAQLLSHDEQTYQFEIAQFYCELAQTALFKSNLDAARYNVQKALDANKKCAR---ANMI 222 Query: 266 AAKSLISQNKKRKAEV---ILEK---IWKVNPHPEIANIYTH-LLSENTVGKL----KRA 314 Q A +E+ + ++ Y E + +L + Sbjct: 223 LGDIETKQGNFPAAVEAYGAIEQQNHAYLSMVGEKLYEAYAAQGKQEEGLNRLIGYMQTF 282 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLL----AQIEQ 369 L+ IN ++ + AL + +A A+ ++ P ++ LL + + Sbjct: 283 PDLDLIN--------VIYEKALLLKGESEAAQLAIDLVRQKPDLNGVYRLLGLKISDMNP 334 Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 A + D + L ++ + + S W P F Sbjct: 335 AWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWETF 382 >gi|307183491|gb|EFN70290.1| Transmembrane and TPR repeat-containing protein 4 [Camponotus floridanus] Length = 485 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 81/212 (38%), Gaps = 14/212 (6%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK--KNAKEWNRNRAILLIARSLENADKGDM 242 P A + ++ + + W+R+ + N+K ++A + A + + AD GD+ Sbjct: 221 PKAALLAYIMLIILLFTRSWTRSSQWRNEKLLFQSALDVCPLNAKVHYNIAKNAADTGDI 280 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + E+L+L N A L + KA + ++ +N + A + +L Sbjct: 281 NLAKLEYQEALRLNPNYTQAMNNLGNLLRDDGQISKAINLFKQA--INLQKDFATAWMNL 338 Query: 303 -LSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++++++ + K + + + + + LE D+A + A + P Sbjct: 339 GIAQSSLKQYKESETSYFMALQHRSNYPDCYYNLGILYLEQKQYDKALKAWINATRQKPT 398 Query: 358 -KEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 + + + + + K + A A Sbjct: 399 HRRAWTNMILLLD----DLGKTEEALRMANTA 426 >gi|262199637|ref|YP_003270846.1| hypothetical protein Hoch_6484 [Haliangium ochraceum DSM 14365] gi|262082984|gb|ACY18953.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 1257 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 64/208 (30%), Gaps = 11/208 (5%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-----HEKLEMML 147 +++ AR++ V E V + +A A A + Sbjct: 965 LALDTGERRAARRILERVLGDEADAVEPAVLIEAAHVATASGALADAQGFLDRAAAGELS 1024 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + R G L+SA A +P ++ + +E +A Sbjct: 1025 GPAQVALARERG--HLALRRGTLDSAVEQLALAHAGAPSDGEAALLLIDARLQREELEQA 1082 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----NSIMAS 263 + A ++ + ++ + + A+ +L+ A Sbjct: 1083 QAVADALAATAGTSPASQHLAAGLLAMAKREFDTAQERFDQAVAALEEAQATPRQFARAH 1142 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291 I A ++L ++ R A LE+ +++P Sbjct: 1143 ILAGRALFQADELRDASKALERAIRLDP 1170 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 109/294 (37%), Gaps = 20/294 (6%) Query: 93 MSIAAHNIPLARKMHSYVSQQH-TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 M++A++ + ARK VS L ++ LA + A E LE L + Sbjct: 790 MALASNALAPARKALIDVSDLQERIAGSPAALGLRGRVHLALDDLDSAAEDLEAALALLP 849 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A +L + R G A + L + + + A + + RA L Sbjct: 850 GDLAATQALAQVALRRGAPRDAVEFLEP-LMSAGASAEIQLAFATALRRSGAFERAAEVL 908 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS---ICAAK 268 + K + R +++ R+ D+GD + + I + + + A+ I AA+ Sbjct: 909 DTMAKADEPEPR----VMLERARLARDQGDWDRARREFIAAAERVPGTPTATEAIIDAAR 964 Query: 269 SLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLEEI 320 + ++R A ILE + V P I + S + G L RA E Sbjct: 965 LALDTGERRAARRILERVLGDEADAVEPAVLIEAAHVATASGALADAQGFLDRAAAGELS 1024 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQAN 371 V +AL G++D A + LA AP + L+ A++++ Sbjct: 1025 GPAQVALARERGHLALRRGTLDSAVEQLALAHAGAPSDGEAALLLIDARLQREE 1078 >gi|94968248|ref|YP_590296.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94550298|gb|ABF40222.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 609 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 5/134 (3%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKN 217 L FE + GD A+R A+ + P+ W + + W+ A F + + Sbjct: 466 HLAFEVYKRGDAADAERLYKHAVALGPN-DWPANFGLAMIEMRMSNWNEADRFFQRAIEI 524 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + +L ++ + A+ E++ N + A+ L Q + Sbjct: 525 SPSVSNGSYLL---QARVRVEMQHYDAAEKSVREAIDNWPNIASQHLLLAQILTKQGRIE 581 Query: 278 KAEVILEKIWKVNP 291 +A +K +NP Sbjct: 582 EARSEYQKELTLNP 595 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 62/171 (36%), Gaps = 13/171 (7%) Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 WS + + A + L + E +GD + ++ L N A+ Sbjct: 443 WSNNLALFLRGVDVAPNSTPAYSHL----AFEVYKRGDAADAERLYKHAVALGPNDWPAN 498 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRL 317 A + + +A+ ++ +++P + A + + + K R + Sbjct: 499 FGLAMIEMRMSNWNEADRFFQRAIEISPSVSNGSYLLQARVRVEMQHYDAAEKSVR-EAI 557 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367 + +++++I + G I++A ++ + + P + LA+I Sbjct: 558 DNW-PNIASQHLLLAQILTKQGRIEEARSEYQKELTLNPTSTEARMGLAEI 607 >gi|262305033|gb|ACY45109.1| acetylglucosaminyl-transferase [Scutigera coleoptrata] Length = 290 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVAEAEECYNTALRLCPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDAYCNLAHCL 200 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVAEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A E L++ T ++ +L G A R KAL++ P+ Sbjct: 27 ANALKEKGQVAEAEECYNTALRLCPTHADSLNNLANIKREQGFTEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYESRMKKLVAIVADQLDKNRLPSVHPHH 236 >gi|254430727|ref|ZP_05044430.1| TPR repeat containing Spindly family protein [Cyanobium sp. PCC 7001] gi|197625180|gb|EDY37739.1| TPR repeat containing Spindly family protein [Cyanobium sp. PCC 7001] Length = 1107 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 14/141 (9%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKAL 181 L A + +++ A + E A Y L+ GD R +AL Sbjct: 359 LAGVAAHMQGRHDEAIRRFEA---AQAAGFLTPYLLFNAGNACRSRGDTGEGLRLYREAL 415 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + PD P + + A A L ++ W+ + + A+ Sbjct: 416 ALLPDFPECRHNLALGLIEAGRPEEAEATLRLLLRDQPSWH--------QAAFQLANLLR 467 Query: 242 MIASYHDAIESLKLCDNSIMA 262 +A+E+ +LC A Sbjct: 468 SQRREAEAVEAFRLCLQFAPA 488 >gi|238757379|ref|ZP_04618565.1| Cellulose synthase protein C [Yersinia aldovae ATCC 35236] gi|238704418|gb|EEP96949.1| Cellulose synthase protein C [Yersinia aldovae ATCC 35236] Length = 1111 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 27/237 (11%) Query: 73 FHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN--EYLVYLLEVQIA 130 ++ +GY L + + N A + + L + L V Sbjct: 143 RLYFGQQKDAQGYAMLEK-VAADPVGNADAAELWMNTIKAMAVSPQSVAALTHFLGV--- 198 Query: 131 LAER-QYNIAHEKL---EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + Q + A + L + ML P R + G +A +AL +S Sbjct: 199 FSSGPQADSARKTLASQQAMLADPAYQARLSGL-----AKVDSGGGTAAIPALKQALAVS 253 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW----------NRNRAILLIARSL 234 P+ P + A+ Y + + +A+ Q +K K+ NR LL Sbjct: 254 PNDPELLGALGLAYARSGDRVQALRLFEQAQKADKDGLNSDKWTSLIKTNRYWLLSDEGD 313 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + GD + ++ ++ + A I ++++ + AE ++ ++ P Sbjct: 314 KALKAGDTARALQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLEP 370 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 74/208 (35%), Gaps = 18/208 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLL----------EVQIALAERQYNI 138 GL + + A ++ + + +++ L+ E AL Sbjct: 264 GLAYARSGDRVQALRLFEQAQKADKDGLNSDKWTSLIKTNRYWLLSDEGDKALKAGDTAR 323 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A +K + QI + +A+ L + D SA++Y +AL + P + Y Sbjct: 324 ALQKYQQARQIDGSDSYALIGLGDVAVARHDDKSAEQYYQQALRLEPSNSSAVRGLANIY 383 Query: 199 VLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +A+++LN Q+ N + +L ++ A + + ++ Sbjct: 384 QRESP-QKALSYLNSLPRSQQTNMRDTSNSLQLDILKQQAEALAAQQQWHQAAQKYRQAQ 442 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 K+ + + + A++L +A+ Sbjct: 443 KMAPDDVWITYRLAQALEQDKHLPEADA 470 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 102/314 (32%), Gaps = 54/314 (17%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESC 165 Y Q ++ + Q ++ A + + ++ ++ Y+LY S Sbjct: 437 KYRQAQKMAPDDVWITYRLAQALEQDKHLPEADAQFRQLAKLKPGDPQQVYAYALYLSST 496 Query: 166 RIGDLNSAQRYATKALDISPDAPW-----------VTEAVV---QQYVLAKEWSRAITFL 211 D + A P A W + V+ +Q A + + AI L Sbjct: 497 NR-DSQALAHLA-----TLPTAQWNDNIRELDKRLKLDQVLTQARQQRAAGDEAGAIAIL 550 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +Q+ N + L +LE D + + Y + A + ++ I Sbjct: 551 HQQ----PPANTQIDLTLADWALERGDYSEALTGYQHVRAREPQNPD---ARLGEIEAYI 603 Query: 272 SQNKKRKAEVILEKI------WKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEINKES 324 ++ + +A L+ +N +AN + + + +R S Sbjct: 604 AEGRLSEARQHLQTEPLSTEGASLNTQRRVANAWRDVGEPQQAADIFQRLKPAAAKGGVS 663 Query: 325 VESLVIV---SKIALEMGSIDQAHA---KAMLAMKIAP----RKEIFLLLAQIEQANSHN 374 E+ +++ +++A G A AM+A I P + + LL + + + Sbjct: 664 QENALLLRDSARLAQSQGQPVAAQEDYKHAMVASGITPILPADNDSYTLLT---RNQATD 720 Query: 375 TDKILYWTQSALHA 388 W + + + Sbjct: 721 D-----WLKRGVRS 729 >gi|284053977|ref|ZP_06384187.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] Length = 532 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 19/242 (7%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++N A + + +++ + ++L + + D A KA+++ P+ W + Sbjct: 145 RWNEAADAYQNAIKLKGDFALSHHNLGYILVKKEDWEGAIAAYQKAIELDPNFVWSHYNL 204 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS-YHDAI--- 250 V +EW AI+ K + L A + + I+ YH AI Sbjct: 205 GDILVKKEEWEGAISAYRSAVKIDPNLPQFHEKLGEALRNQIQISSEEISQVYHRAIKDN 264 Query: 251 --------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--VNPHPEIANIYT 300 ++L++ S+ A L Q K +A + + N H A + Sbjct: 265 PTDLQLYYKALEVNPKDAEISLKLADVLKEQGKIEQAITFYKSTLQIDSNNHEIQAVAWH 324 Query: 301 HLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L +K ++ E+ E S + ++ ++G + +A A+KI Sbjct: 325 RLGDIFKQLGRLQEAIKAYQQVVELKPEWAGSHFNLIRVLRQLGRLQEAEKAGNRAVKIE 384 Query: 356 PR 357 PR Sbjct: 385 PR 386 Score = 43.4 bits (101), Expect = 0.095, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 71/209 (33%), Gaps = 28/209 (13%) Query: 158 YSLYFESCRIGDL--NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 L ++ + +AQ Y A+ ++P+ W + + + W+ A Sbjct: 99 RHLLGDALSKLEQWSEAAQAY-QNAIALNPEFSWSHNNLGDALLKLERWNEAADAYQNAI 157 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K ++ A+ K D + ++++L N + + L+ + + Sbjct: 158 KLKGDF----ALSHHNLGYILVKKEDWEGAIAAYQKAIELDPNFVWSHYNLGDILVKKEE 213 Query: 276 KRKAEVILEKIWKVNP-----HPEIANI---------------YTHLLSENTVGKLKRAL 315 A K++P H ++ Y + +N L+ Sbjct: 214 WEGAISAYRSAVKIDPNLPQFHEKLGEALRNQIQISSEEISQVYHRAIKDNPTD-LQLYY 272 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQA 344 + E+N + E + ++ + E G I+QA Sbjct: 273 KALEVNPKDAEISLKLADVLKEQGKIEQA 301 >gi|149377996|ref|ZP_01895721.1| TPR repeat protein [Marinobacter algicola DG893] gi|149357705|gb|EDM46202.1| TPR repeat protein [Marinobacter algicola DG893] Length = 582 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 88/291 (30%), Gaps = 37/291 (12%) Query: 99 NIPLARKMHSYVS-QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + F E L LL +IA ++++ M +R+ V Sbjct: 36 DDATASSAEPSADIRYADFEPEELYLLLSGEIAAQRGRFDVTLVNY--MKAAQQSRDLGV 93 Query: 158 YS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--- 213 + + N+ Q+ A L+++PD Q V E A+ + + Sbjct: 94 IERTMRIAQSLNADNAQQKLAALWLEVAPDNMQAHRISAIQAVKKNELETALGHMEKIMD 153 Query: 214 -----------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI---------ESL 253 + + +L + + LE + Y A+ ++L Sbjct: 154 LGGDADFDSLAAMAGNLPPEQQQELLDLYQQLEQRHPDNPELQYSIALLLKVTGEPQQAL 213 Query: 254 -------KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LL 303 + A I L N+K++A L + P + ++ +Y + Sbjct: 214 AKLEPLLDSKPDFQPALILKGDLLYQTNQKQQALDHLRANTRQFPDNRQMGTLYGRMLIG 273 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 RL + + + +ALE I A + ++ Sbjct: 274 EGELQTAQNEFRRLVNRFPDVPGLRLSYALVALENDQIALAKEELTRLIEQ 324 >gi|148270125|ref|YP_001244585.1| TPR repeat-containing protein [Thermotoga petrophila RKU-1] gi|147735669|gb|ABQ47009.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga petrophila RKU-1] Length = 357 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 9/158 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286 L +LE AD+ ++ L + +N A L+ Q K + L+K Sbjct: 100 LYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLDKAVE 159 Query: 287 ---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 W V + + Y +L + + R E N + ++++ EM D Sbjct: 160 IDPWLVQAYASLGEAYYNL--GDYEKAIHYWERELEYNPNDKITYFMITEAYYEMNRKDL 217 Query: 344 AHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 A ++I P L+Q+ + N +K Sbjct: 218 AVKALERLLEIDPDNIPALYQLSQLYR-ELGNEEKARE 254 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 83/246 (33%), Gaps = 36/246 (14%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD--ISPD-APW 189 E + + E M + + E L + I P+ W Sbjct: 33 EGDWELLK---EDMKKKEN--------IMKEVQTCEKLEKVVHLDETVYEPLIFPEFQEW 81 Query: 190 VTEAV-----VQQYVLAKEWSRAITFLNQKKKNAK--------EWNRNRAILLIARSLEN 236 + E + L + A+ + ++ + + + N A + Sbjct: 82 LREENITPKDFKNVSLKGLYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLL 141 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294 ++G + +++++ + A ++ + KA E+ + NP+ + Sbjct: 142 VEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPN-DKI 200 Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 I Y + ++ +K RL EI+ +++ +L +S++ E+G+ ++A Sbjct: 201 TYFMITEAYYEMNRKDLA--VKALERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEEK 258 Query: 351 AMKIAP 356 M P Sbjct: 259 IMNCKP 264 >gi|147921279|ref|YP_684907.1| hypothetical protein RCIX74 [uncultured methanogenic archaeon RC-I] gi|110620303|emb|CAJ35581.1| hypothetical protein RCIX74 [uncultured methanogenic archaeon RC-I] Length = 218 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 3/161 (1%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + + +L++ Y GDLN+A +AL + P+ + Sbjct: 23 GDSREAVKCFDRILKLNPDSISGWYGRGLAMKASGDLNAALECFDRALSLDPELTEAWQE 82 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAI 250 Y A AI + + ++ + L +++E+ D S Sbjct: 83 KGLVYQSAGNIDGAILCFSCAVGIDPLYAPGWFSKGLALQEKAMESEDYELFRESAECFE 142 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +LK+ A SL+ + ++A + + + +P Sbjct: 143 CALKMSPGMTEAWFGRGVSLLMLGQPQEAVRCFDHVIESDP 183 >gi|327539622|gb|EGF26230.1| TPR repeat-containing protein [Rhodopirellula baltica WH47] Length = 631 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 88/267 (32%), Gaps = 16/267 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + K S + + L YLL + +A + + P+ E Sbjct: 205 GDEERIAKATSAAIKLLQDDPKELSTAYLLRAMT-QDKTDDQLADLT-KAIELDPSNAEA 262 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 V + GD + A K L++ P + A VQQ V A+ L++ Sbjct: 263 -VRQRAGLRMQEGDFDKAVEDLQKVLELDPTNEQIAAATVQQLVELDRADDALELLSKTI 321 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + R L+ +++ D + D ++L + +A + A+ + ++ Sbjct: 322 QARPSEGLYRLRALLYTNMDREDD-----ALADLNKALAMQPKDPIALLQRAEISLRRDD 376 Query: 276 KRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + A+ L+ + P E + + + + L + + + V + Sbjct: 377 VKDAKRDLDAAIDLAPQVEQLDQAIVVRCFIAVEEGRMADAINDMKILIDRSPDDVYRQL 436 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + L+ QA + P Sbjct: 437 QLANLYLQDDRPRQAIDMLSGVLDRDP 463 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 55/138 (39%), Gaps = 11/138 (7%) Query: 230 IARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLI----SQNKKRKAEV 281 +A ++ + +A+ ++++ A + A+ + + + KA Sbjct: 156 LAGAMTRMRGRRALQVRDEALRVLDQAIENDPELAEAHMLIARLNLLPDGDEERIAKATS 215 Query: 282 ILEKIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K+ + +P E++ Y + + T +L + E++ + E++ + + ++ G Sbjct: 216 AAIKLLQDDPK-ELSTAYLLRAMTQDKTDDQLADLTKAIELDPSNAEAVRQRAGLRMQEG 274 Query: 340 SIDQAHAKAMLAMKIAPR 357 D+A +++ P Sbjct: 275 DFDKAVEDLQKVLELDPT 292 >gi|308160490|gb|EFO62977.1| Hypothetical protein GLP15_191 [Giardia lamblia P15] Length = 315 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 82/217 (37%), Gaps = 39/217 (17%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G+ A A +AL + + P V +++ + + +A ++ +A + + ++ Sbjct: 31 KLEAGNFTKALAIAERALPLC-NQPSVLDSLGEIFSVAGDFQKATSCYAKAL----GYDH 85 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN---KKRKAE 280 + GD A++ +A + ++ ++ ++ Sbjct: 86 LTHAAGLRYMTLYEITGD-------------------PANLNSAIGIFRKHTSTEESRSS 126 Query: 281 VILEKIWKVNPHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +IL +A+ Y L +T ++ A IN +E + ++ L Sbjct: 127 LILALA-------TLADAYLTRLDPPDTKAAIRAAKEAIGINPSYIEPHISLAGAYLVAE 179 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 S D A A+ A+K+ ++ ++ +IE+A + + Sbjct: 180 SFDLAEKAALCALKLMEQRGLY----KIERAEDGSEE 212 >gi|32474397|ref|NP_867391.1| hypothetical protein RB6671 [Rhodopirellula baltica SH 1] gi|32444935|emb|CAD74937.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 281 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 80/238 (33%), Gaps = 16/238 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + +A L + + A + + G A + KA+ +S P + Sbjct: 3 QGDWTVAETLFTEALDVSNVNDAAHRGMSESLWQKGHREEAIAHLEKAVQLSAGDPKHMQ 62 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + Y+ A ++ + A + +R A L + + + + Sbjct: 63 RLGRMYLEVGRVDEA----ARQCQIALDSDREWAALWALWGDCQVARNEKDEALSAYHRA 118 Query: 253 LKLCDNSIMASICAA----------KSLISQNKKRKAEVILEKIWKV-NP-HPEIANIYT 300 L L + + A + L + ++ R+ ++ + + P ++ Sbjct: 119 LSLQPDYPYVQLRTAEIYHQQKRYDRLLATLDRLREDTEVVGDVDEAIRPGAADLLRGIA 178 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 T ++ + + N E S + ++ IA+E G + A AM++ P Sbjct: 179 MRELGRTEESVQYFIASAQKNPEDATSRLQLASIAVETGQPEIAQTWLAQAMRLDPSA 236 >gi|197118152|ref|YP_002138579.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197087512|gb|ACH38783.1| TPR domain lipoprotein [Geobacter bemidjiensis Bem] Length = 882 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 27/247 (10%), Positives = 71/247 (28%), Gaps = 9/247 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 +A + A E+ ++ L + ++ +A KA+ + Sbjct: 639 AYVAMNDSSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSV 698 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A+ Y KE+ +A+ ++ + + + A Sbjct: 699 EARIALGNLYQGTKEYDKALASYQYAQRMNPDSVAAQFAIGALYDSTGKKNQAADAYRAV 758 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSE 305 ++ + + A K +A + +K P +P + + Y + Sbjct: 759 LQKNDRYVPALNNLAYLCADGY---GSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNG 815 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM---KIAPRKEIFL 362 + +K R + + G ++ ++ + K Sbjct: 816 RSADAVKVMERAVALLPNDPTVRYHLGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQT 875 Query: 363 LLAQIEQ 369 LLA++++ Sbjct: 876 LLAELKR 882 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 48/152 (31%), Gaps = 12/152 (7%) Query: 126 EVQIA-----LAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATK 179 Q A + + N A + +LQ A+ +L Y + G A R A Sbjct: 733 AAQFAIGALYDSTGKKNQAADAYRAVLQKNDRYVPALNNLAYLCADGYGSKEEALRLAIS 792 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A P P V + V + A+ + + R L +A L Sbjct: 793 AFKQQPGNPGVMDTVGYALAKNGRSADAVKVMERAVALLPNDPTVRYHLGLAYYL----A 848 Query: 240 GDMIASYHDAIESLKL--CDNSIMASICAAKS 269 GD S +SL L ++ A A+ Sbjct: 849 GDRARSEQALQKSLSLGQSPDTKAAQTLLAEL 880 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 11/240 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + A ++ +L TR+ + L + G YAT+ L P Sbjct: 64 AKAYAALGKNEQAEKEFTKVLTQNPTRDEVLLELAKLNNASGKGAQGFSYATQYLAKHPG 123 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 A EA +++K+ A + Q K + +R+ + + + GD + Sbjct: 124 AVDGLEAAGISCLVSKKHQEAREYFTQALK----VDPSRSATKLELASLDMATGDTERAK 179 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTH 301 E + + A A + KA V+ +KI +++ + +A +Y Sbjct: 180 ALLNEVILAEQKNFKALYMLAAIENNSGHGDKAAVLYQKILQLDQNQVLALYKLGLLYLE 239 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + +RA ++ + + + + A D A ++K++P E + Sbjct: 240 RGEVDKAD--QRADQMIKAFPKKGDGYRLKGLAAFYRKRFDDAITSLQQSVKLSPTLEAY 297 >gi|167525922|ref|XP_001747295.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774130|gb|EDQ87762.1| predicted protein [Monosiga brevicollis MX1] Length = 826 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 79/269 (29%), Gaps = 61/269 (22%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----------------LYFESC 165 V +L + + Y+ A + + R + L E Sbjct: 583 VQVLLGRAYMELADYDAAEQAFRSARRFEKHRLSGLEYYSTVLWHMAKITDLAYLANEVM 642 Query: 166 R----------IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + + A +Y +A+ + P + + ++ + RA Q Sbjct: 643 TIDPKHAVSCLQKEADRACQYFQRAVQLDPTFAYAYTLLGHEFSANNDHERAQACFRQAL 702 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 NR + A + ++ + I + ++ +S + K L + + Sbjct: 703 AQ----NRRLYNAWFGLGMLAARQERLVEAEKQLILATRINPSSPILRCHLGKVLGMRGR 758 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A +L+K +++ P EN + + RA L +N Sbjct: 759 FVLALRVLDKAYEMAP-------------ENPLVRYTRASMLISLN-------------- 791 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +A + + AP++ + + Sbjct: 792 ----RYPEALTELEKLLVDAPKESVVYFM 816 >gi|157114867|ref|XP_001652461.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti] gi|108877167|gb|EAT41392.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti] Length = 381 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 83/291 (28%), Gaps = 27/291 (9%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +L Q ++ A E L+ L P + Y+L D A K Sbjct: 51 LGSVLSAQ-----GRHQEAKEALKAALSYRPNMADV-HYNLGILLQNQQDYEEAVESFRK 104 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-------KKKNAKEWNRNRAILLIAR 232 A+ P + + A + L + ++ + R L+ Sbjct: 105 AIQFRPSLALAYLNLGTSLIALGRCQEAASVLREGSKLDGVGLRDRAAHDNARISALLQL 164 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRKAEVILEKIWKV 289 AD+G + + E+L + + + N+ +AE + Sbjct: 165 GNLYADQGKLQRALAVYREALHILPDRYPPQGIYHRLGEVFARLNQWSEAERFQRAALEA 224 Query: 290 NP-----HPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 P H ++ + KRALRL ++ + Sbjct: 225 QPDHIAAHISYGSMLARNSSRTSEAEQWFKRALRLA---PADASVHHHYAEFLASVRRTA 281 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +A + A ++AP + A + W + A+ P+ Sbjct: 282 EACQYRVKAAELAPDDYSLVTAAASALRLLDRKVEAERWYRQAVTLRPEEA 332 >gi|11467562|ref|NP_043708.1| photosystem I assembly protein Ycf3 [Odontella sinensis] gi|1351777|sp|P49525|YCF3_ODOSI RecName: Full=Photosystem I assembly protein ycf3 gi|1185257|emb|CAA91740.1| ORF179 [Odontella sinensis] Length = 179 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 15/141 (10%) Query: 126 EVQIALAERQYNIA-HEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 A +E +Y A E + + P R + +Y++ G+ + A Y +AL+ Sbjct: 35 AGMSAQSEGKYAEALENYYEALQLEEDPYDRSYTLYNIGLIYGNNGNYSQALEYYHQALE 94 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++ + P + Y + L + ++ RN L + + E DK Sbjct: 95 LNSNLPQALNNIAVIYHSQG-----LNALQMQNQDKNLEIRNDEYLEL--AKEFFDK--- 144 Query: 243 IASYHDAIESLKLCDNSIMAS 263 + ++LKL ++ + Sbjct: 145 --AAEYWRQALKLAPDNYPGA 163 >gi|193062647|ref|ZP_03043741.1| tetratricopeptide repeat protein [Escherichia coli E22] gi|193069957|ref|ZP_03050905.1| tetratricopeptide repeat protein [Escherichia coli E110019] gi|194425776|ref|ZP_03058332.1| tetratricopeptide repeat protein [Escherichia coli B171] gi|260843628|ref|YP_003221406.1| hypothetical protein ECO103_1443 [Escherichia coli O103:H2 str. 12009] gi|192931769|gb|EDV84369.1| tetratricopeptide repeat protein [Escherichia coli E22] gi|192956710|gb|EDV87165.1| tetratricopeptide repeat protein [Escherichia coli E110019] gi|194415831|gb|EDX32097.1| tetratricopeptide repeat protein [Escherichia coli B171] gi|257758775|dbj|BAI30272.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009] gi|323162357|gb|EFZ48212.1| tetratricopeptide repeat family protein [Escherichia coli E128010] Length = 389 Score = 46.5 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQIYITRQLQRHPTMRVFHKLM 322 >gi|149917256|ref|ZP_01905755.1| hypothetical protein PPSIR1_40275 [Plesiocystis pacifica SIR-1] gi|149821863|gb|EDM81257.1| hypothetical protein PPSIR1_40275 [Plesiocystis pacifica SIR-1] Length = 439 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 44/164 (26%), Gaps = 16/164 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A+K + ++ L E + + M+ Sbjct: 49 GEGSAAKKGGDAKAAALHPDDQELAD--RRSKDQLEHDPAAVKKTHDEMVA--------- 97 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 L E+ + GD +A L + P + A +W A+ Sbjct: 98 --LLAEARKLGEAGDTEAAVAKYEALLKLDPHYRPALIEAGELEAKAGDWVAAVHHTKLA 155 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 K + + + LL +G + H E+L L + Sbjct: 156 AKLTADDDAMKVTLLDRVGQYAEKEGKNNDAAHYYREALALKPD 199 >gi|315050516|ref|XP_003174632.1| bimA protein [Arthroderma gypseum CBS 118893] gi|311339947|gb|EFQ99149.1| bimA protein [Arthroderma gypseum CBS 118893] Length = 804 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 72/202 (35%), Gaps = 17/202 (8%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDA--P 188 + ++ A + Q+ R Y+L E + + AQ A++ + Sbjct: 591 LQGDHDQALRCFKRATQVDP-RFAYGYTLQGHEYMSNEEYDKAQDAYRYAINANARHYSA 649 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W V + + F Q + A N +L+ + L + ++ A+ Sbjct: 650 WYGLGKVYER------MGKLKFAEQHLRTASNINPANVVLICSIGLVLERQNNLKAALLQ 703 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA---EVILEKIWKVNP--HPEIANIYTHLL 303 + L +S++A + A++L+ N+ A +L+ + P H + +Y + Sbjct: 704 YSRASSLSPHSVLARLRKARTLLKLNEVNLAHIELKVLKDVAPDEPNVHYLLGKLYKMIQ 763 Query: 304 SENTVGKLKRALRLEEINKESV 325 + +K ++ ++ Sbjct: 764 DKGNA--IKHFTTALNLDPKAA 783 >gi|299472683|emb|CBN78335.1| flagellar associated protein [Ectocarpus siliculosus] Length = 1318 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 98/343 (28%), Gaps = 58/343 (16%) Query: 93 MSIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 + +A A + +S + L++ + E + A E E L++P+ Sbjct: 522 VHLAQGRCRAASNSLEQALSFSFRVGKNPVFLLVKASVQKEEGKLEEALETFEEALRLPS 581 Query: 152 TR-------------------------------EFAVYSLYFESCRIGDLNSAQRYATKA 180 R + + R A +A Sbjct: 582 VRGSTLGGSAPATRGGTVGTALSSFTDGEKAAIFSGAVGVLAKLKR---TAEATELVKEA 638 Query: 181 LDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + + P + VV + + ++ +A+ L + + R +++ Sbjct: 639 MAMFRGTPDEVQIVVANSELAIERGDFEKALKILGDVPPESPAYVRVQSVKATIYLTLRR 698 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292 DK Y D ++ + ++ + A E +P Sbjct: 699 DKRAYAQCYRDMAQANPSAATYV----LLGEAYMRIQMPEAAIESFEIALDTDPSDSSLA 754 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +I + + ++ + SV ++++ L++G + A A+ Sbjct: 755 GQIGRALVS--THDYRRAVEYYRKALRGQPRSVPLRHDLARLCLKLGRYEDASGVLQQAL 812 Query: 353 KIA--------PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + L+LA++ +A + + ++ A Sbjct: 813 IEDSSDVEDMKADVQTLLILAEVHEA-TGDDNQADSSLARASE 854 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 51/311 (16%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL + + + Q ++A + L+ +L + E A G +A +AL Sbjct: 481 ARLLMARASYSTGQADLAQQTLQELLAMDPALEDAHLLAAQVHLAQGRCRAASNSLEQAL 540 Query: 182 DISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKK----------NAKEWNR----- 223 S ++ + A+ + + + R Sbjct: 541 SFSFRVGKNPVFLLVKASVQKEEGKLEEALETFEEALRLPSVRGSTLGGSAPATRGGTVG 600 Query: 224 ---------NRAILLIARSLENADKGDMIASYHDAIESL---KLCDNSIMASICAAKSLI 271 +A + A + E++ + + + + ++ I Sbjct: 601 TALSSFTDGEKAAIFSGAVGVLAKLKRTAEATELVKEAMAMFRGTPDEVQIVVANSELAI 660 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-----TVGKLKRA-----LRLEEIN 321 + KA IL + +P Y + S T+ + KRA + + N Sbjct: 661 ERGDFEKALKILGDVPPESP------AYVRVQSVKATIYLTLRRDKRAYAQCYRDMAQAN 714 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--NSHNTDKIL 379 + + V++ + + + + A +A+ P L QI +A ++H+ + + Sbjct: 715 PSAA-TYVLLGEAYMRIQMPEAAIESFEIALDTDPSDSS--LAGQIGRALVSTHDYRRAV 771 Query: 380 YWTQSALHAMP 390 + + AL P Sbjct: 772 EYYRKALRGQP 782 >gi|196006385|ref|XP_002113059.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens] gi|190585100|gb|EDV25169.1| hypothetical protein TRIADDRAFT_56833 [Trichoplax adhaerens] Length = 996 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 76/205 (37%), Gaps = 20/205 (9%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + D +A+++ P+ P + + + A N Sbjct: 251 QGLMDLAV---DTYK------RAIELQPNFPDAYCNLANALKELGKVTEAEECYNTALSL 301 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A L + +KG + + ++L++ A A L Q K + Sbjct: 302 CPT----HADSLNNLANIKREKGQIGEASKLYRKALEIFPEFAAAHSNLASVLQQQGKLQ 357 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVS 332 +A ++ ++N P A+ Y+++ + ++ G ++ R +IN ++ ++ Sbjct: 358 EALAHYKEAIRIN--PSFADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPNFADAHSNLA 415 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 I + GSI +A A A+K+ P Sbjct: 416 SIHKDSGSIPEAIANYRTALKLKPD 440 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 70/251 (27%), Gaps = 29/251 (11%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GLM +A + +Y N Y + A E L + Sbjct: 251 QGLMDLA---------VDTYKRAIELQPNFPDAYCNLANALKELGKVTEAEECYNTALSL 301 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T ++ +L G + A + KAL+I P+ + + A+ Sbjct: 302 CPTHADSLNNLANIKREKGQIGEASKLYRKALEIFPEFAAAHSNLASVLQQQGKLQEALA 361 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + A + D+ + ++++ N A A Sbjct: 362 HYKEAIRINPSF----ADAYSNMGNTLKEMQDVQGAIQCYTRAIQINPNFADAHSNLASI 417 Query: 270 LISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVG-KLKRA--------- 314 +A K+ P P+ +A+ Y + ++KR Sbjct: 418 HKDSGSIPEAIANYRTALKLKPDFPDAFCNLAHCYQIICDWADYELRMKRLVSIVQDQLE 477 Query: 315 -LRLEEINKES 324 RL ++ Sbjct: 478 KGRLPSVHPHH 488 >gi|167627915|ref|YP_001678415.1| type IV pili, pilus assembly protein [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597916|gb|ABZ87914.1| type IV pili, pilus assembly protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 297 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 54/163 (33%), Gaps = 18/163 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L++ Q E +A Y++S G + A++Y KAL Sbjct: 87 TKLIKAQELANEHNQKLAIVDY-----------AG--GYYYQSI--GANSIAEKYYQKAL 131 Query: 182 DISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + P Q +++SRA + + + + L ++ + K Sbjct: 132 ENHPKNYEAMNFYAQFLCTEKEDYSRAQELFEKALFMPNNNDMAQTLFLYSQCMYKQGKK 191 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 D +Y + K + A + A+ + + ++ ++ Sbjct: 192 DDALAYMQ--RADKFRIDYKAAKLRLAQMYFERGEYKECYKVI 232 >gi|104780135|ref|YP_606633.1| response regulator/TPR domain-containing protein [Pseudomonas entomophila L48] gi|95109122|emb|CAK13819.1| putative response regulator/TPR domain protein [Pseudomonas entomophila L48] Length = 535 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 21/181 (11%) Query: 120 YLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L LL Q A A+ Y A + +M + + G+ AQ Sbjct: 203 ALGNLLHKRGQHAQAQGVYEQALKAFPIMPNLYD-------GMAEVLVAQGETRRAQHML 255 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--LLIARSLE 235 +A+ +SP A A+ + + ++ A + A L + ++L Sbjct: 256 EEAVRLSPLAVRRQAALGKLALDNADFESASKAFRHAVNQGQSSRYKDAESNLGLVQALM 315 Query: 236 NADKGDMIASY----------HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 N + G+ + + A E+++ + A + A SL A + E+ Sbjct: 316 NKNAGNGLDARTRVEINTVLSEVAKENVEDQGLQVRARLMKAASLQQAGDAETAAKLTEQ 375 Query: 286 I 286 Sbjct: 376 A 376 >gi|332642377|gb|AEE75898.1| protein high chlorophyll fluorescent 107 [Arabidopsis thaliana] Length = 618 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 18/267 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 NI AR + + + NEY+ LLE + +Y A + + Sbjct: 251 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKA----GRYEQARYLFKQATICNSRSC 305 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + + + +A++ KA+ SP + R L Sbjct: 306 ASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL--- 362 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K N +LL + L + + +L I + Sbjct: 363 -KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWKEG 421 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328 A + ++ ++ + E A+ E G L A RL IN +S + Sbjct: 422 NTTTARELYQRALSIDANTESASRCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTW 481 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +++ + G ++A L + Sbjct: 482 MTWAQLEEDQGDTERAEEIRNLYFQQR 508 >gi|320107097|ref|YP_004182687.1| TPR domain-containing protein [Terriglobus saanensis SP1PR4] gi|319925618|gb|ADV82693.1| TPR domain protein [Terriglobus saanensis SP1PR4] Length = 435 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 7/198 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 L + A A + + L QIA + A +L Sbjct: 144 RALARLDAGTNNNAAR-DELLQALKLSPETPDDRELAAQIASSSGDSADAETVYRRVLTE 202 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + A L R A+ KAL+ P ++ + Y K+ A+ Sbjct: 203 SPGQIEASIGLARLQARAARFTDAEATLNKALETHPGDVTLSTQLASIYGAEKKPEAALA 262 Query: 210 FLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + ++ N +R + + G S LK + + Sbjct: 263 LLETAHTAHPEDPNVSRML-----ARLYVQTGAPDKSISIYETLLKAAPSDVELLDDYGD 317 Query: 269 SLISQNKKRKAEVILEKI 286 L+ + +AE +L+K Sbjct: 318 GLMRNKQFAQAEDVLKKA 335 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 88/292 (30%), Gaps = 35/292 (11%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 +M + E ++ + L + + A + L+ +L+ A Y L F Sbjct: 16 AQMQLPAGTRSALDVEEQQKQIQNAEELLQKNEAAKARDLLQAVLKGDPKNARASYDLGF 75 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + + +A+ A+ A+ + + A L + + Sbjct: 76 ADESLKEEAAAETAYRSAIAADKSQFEARLALGLLLARQGKMAEAREQLLAATERTPVSD 135 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + + A+ + +++LKL + AA+ S AE + Sbjct: 136 PSNKGMAFRALARLDAGTNNNAARDELLQALKLSPETPDDRELAAQIASSSGDSADAETV 195 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 Y +L+E+ +E+ + ++++ Sbjct: 196 ----------------YRRVLTES---------------PGQIEASIGLARLQARAARFT 224 Query: 343 QAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDP 392 A A A++ P + LA I A L ++A A DP Sbjct: 225 DAEATLNKALETHPGDVTLSTQLASIYGAEKKPEA-ALALLETAHTAHPEDP 275 >gi|195054947|ref|XP_001994384.1| GH16619 [Drosophila grimshawi] gi|193892147|gb|EDV91013.1| GH16619 [Drosophila grimshawi] Length = 701 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 48/171 (28%), Gaps = 13/171 (7%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ A EW N A + + D G+ ++ +++ Sbjct: 414 MLRTRQRAAEWLNEEKLFTSALLVCP----NNAKVHYNIARLATDTGNSSRAFQHYHKAI 469 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L A + R AE + K +PE + +L K K Sbjct: 470 ELYPGYESALMNLGNLYREHGNLRTAEKYIRAALKA--YPEFPVAWMNLGIVQASQK-KY 526 Query: 314 ALRLEEI------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L + + + LE A A+ + PR+ Sbjct: 527 DEALASYWKALKFRPDYAVCHYNMGNLFLEQQHYADALHHWQHAVAVNPRQ 577 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 4/131 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++A + A + +++ E A+ +L G+L +A++Y AL P+ Sbjct: 449 ARLATDTGNSSRAFQHYHKAIELYPGYESALMNLGNLYREHGNLRTAEKYIRAALKAYPE 508 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + K++ A+ + K ++ A+ ++ + Sbjct: 509 FPVAWMNLGIVQASQKKYDEALASYWKALKFRPDY----AVCHYNMGNLFLEQQHYADAL 564 Query: 247 HDAIESLKLCD 257 H ++ + Sbjct: 565 HHWQHAVAVNP 575 >gi|15801897|ref|NP_287917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 EDL933] gi|15831107|ref|NP_309880.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. Sakai] gi|16129241|ref|NP_415796.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr. MG1655] gi|26247613|ref|NP_753653.1| tetratricopeptide repeat protein [Escherichia coli CFT073] gi|74312348|ref|YP_310767.1| tetratricopeptide repeat-containing protein [Shigella sonnei Ss046] gi|89108126|ref|AP_001906.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110] gi|91210574|ref|YP_540560.1| tetratricopeptide repeat protein [Escherichia coli UTI89] gi|110641515|ref|YP_669245.1| tetratricopeptide repeat protein [Escherichia coli 536] gi|157157418|ref|YP_001462579.1| tetratricopeptide repeat protein [Escherichia coli E24377A] gi|157160787|ref|YP_001458105.1| tetratricopeptide repeat protein [Escherichia coli HS] gi|168749091|ref|ZP_02774113.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4113] gi|168755950|ref|ZP_02780957.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4401] gi|168762718|ref|ZP_02787725.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4501] gi|168769351|ref|ZP_02794358.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4486] gi|168775094|ref|ZP_02800101.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4196] gi|168784027|ref|ZP_02809034.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4076] gi|168788404|ref|ZP_02813411.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC869] gi|168799579|ref|ZP_02824586.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC508] gi|170020354|ref|YP_001725308.1| tetratricopeptide repeat protein [Escherichia coli ATCC 8739] gi|170080959|ref|YP_001730279.1| hypothetical protein ECDH10B_1397 [Escherichia coli str. K-12 substr. DH10B] gi|170683676|ref|YP_001743903.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5] gi|187730544|ref|YP_001880112.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94] gi|188496187|ref|ZP_03003457.1| tetratricopeptide repeat protein [Escherichia coli 53638] gi|191171105|ref|ZP_03032656.1| tetratricopeptide repeat protein [Escherichia coli F11] gi|194433842|ref|ZP_03066116.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012] gi|194436935|ref|ZP_03069034.1| tetratricopeptide repeat protein [Escherichia coli 101-1] gi|195939724|ref|ZP_03085106.1| hypothetical protein EscherichcoliO157_25535 [Escherichia coli O157:H7 str. EC4024] gi|208811084|ref|ZP_03252917.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4206] gi|208816308|ref|ZP_03257487.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4045] gi|208821968|ref|ZP_03262288.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4042] gi|209396639|ref|YP_002270336.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4115] gi|209918521|ref|YP_002292605.1| tetratricopeptide repeat protein [Escherichia coli SE11] gi|215486577|ref|YP_002329008.1| tetratricopeptide repeat protein [Escherichia coli O127:H6 str. E2348/69] gi|217329141|ref|ZP_03445221.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14588] gi|218553836|ref|YP_002386749.1| hypothetical protein ECIAI1_1303 [Escherichia coli IAI1] gi|218689272|ref|YP_002397484.1| tetratricopeptide repeat protein [Escherichia coli ED1a] gi|218694855|ref|YP_002402522.1| tetratricopeptide repeat protein [Escherichia coli 55989] gi|227886286|ref|ZP_04004091.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia coli 83972] gi|237705307|ref|ZP_04535788.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238900515|ref|YP_002926311.1| hypothetical protein BWG_1111 [Escherichia coli BW2952] gi|253773720|ref|YP_003036551.1| tetratricopeptide repeat protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161360|ref|YP_003044468.1| tetratricopeptide repeat protein [Escherichia coli B str. REL606] gi|254792870|ref|YP_003077707.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14359] gi|256018471|ref|ZP_05432336.1| tetratricopeptide repeat protein [Shigella sp. D9] gi|256023009|ref|ZP_05436874.1| tetratricopeptide repeat protein [Escherichia sp. 4_1_40B] gi|260854978|ref|YP_003228869.1| hypothetical protein ECO26_1846 [Escherichia coli O26:H11 str. 11368] gi|260867729|ref|YP_003234131.1| hypothetical protein ECO111_1661 [Escherichia coli O111:H- str. 11128] gi|261224265|ref|ZP_05938546.1| hypothetical protein EscherichiacoliO157_06625 [Escherichia coli O157:H7 str. FRIK2000] gi|261257479|ref|ZP_05950012.1| hypothetical protein EscherichiacoliO157EcO_16902 [Escherichia coli O157:H7 str. FRIK966] gi|291282369|ref|YP_003499187.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str. CB9615] gi|293433641|ref|ZP_06662069.1| yciM protein [Escherichia coli B088] gi|300819007|ref|ZP_07099211.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|300904929|ref|ZP_07122747.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|300919464|ref|ZP_07135965.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1] gi|300926666|ref|ZP_07142442.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|300927789|ref|ZP_07143353.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|300948358|ref|ZP_07162464.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|300954528|ref|ZP_07166975.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|300971709|ref|ZP_07171582.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|300971809|ref|ZP_07171643.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] gi|301017636|ref|ZP_07182310.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] gi|301022781|ref|ZP_07186623.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] gi|301046124|ref|ZP_07193299.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|301304377|ref|ZP_07210490.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|301326991|ref|ZP_07220280.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] gi|301647223|ref|ZP_07247042.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|306813694|ref|ZP_07447875.1| tetratricopeptide repeat protein [Escherichia coli NC101] gi|307137921|ref|ZP_07497277.1| tetratricopeptide repeat protein [Escherichia coli H736] gi|307309965|ref|ZP_07589615.1| tetratricopeptide repeat protein [Escherichia coli W] gi|309793245|ref|ZP_07687672.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|312971472|ref|ZP_07785647.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] gi|331641843|ref|ZP_08342978.1| putative heat shock protein [Escherichia coli H736] gi|331652323|ref|ZP_08353342.1| putative heat shock protein [Escherichia coli M718] gi|331657330|ref|ZP_08358292.1| putative heat shock protein [Escherichia coli TA206] gi|331672808|ref|ZP_08373594.1| putative heat shock protein [Escherichia coli TA280] gi|331677061|ref|ZP_08377757.1| putative heat shock protein [Escherichia coli H591] gi|332279526|ref|ZP_08391939.1| tetratricopeptide repeat protein [Shigella sp. D9] gi|77416653|sp|P0AB60|YCIM_ECO57 RecName: Full=Uncharacterized protein yciM; Flags: Precursor gi|77416654|sp|P0AB59|YCIM_ECOL6 RecName: Full=Uncharacterized protein yciM; Flags: Precursor gi|77416655|sp|P0AB58|YCIM_ECOLI RecName: Full=Uncharacterized protein yciM; Flags: Precursor gi|12515512|gb|AAG56533.1|AE005379_1 putative heat shock protein [Escherichia coli O157:H7 str. EDL933] gi|26108015|gb|AAN80215.1|AE016760_74 Hypothetical protein yciM precursor [Escherichia coli CFT073] gi|1742094|dbj|BAA14834.1| conserved hypothetical protein [Escherichia coli str. K12 substr. W3110] gi|2367116|gb|AAC74362.1| TPR-repeats-containing protein [Escherichia coli str. K-12 substr. MG1655] gi|13361318|dbj|BAB35276.1| putative heat shock protein [Escherichia coli O157:H7 str. Sakai] gi|73855825|gb|AAZ88532.1| putative heat shock protein [Shigella sonnei Ss046] gi|91072148|gb|ABE07029.1| putative heat shock protein [Escherichia coli UTI89] gi|110343107|gb|ABG69344.1| hypothetical protein YciM precursor [Escherichia coli 536] gi|157066467|gb|ABV05722.1| tetratricopeptide repeat protein [Escherichia coli HS] gi|157079448|gb|ABV19156.1| tetratricopeptide repeat protein [Escherichia coli E24377A] gi|169755282|gb|ACA77981.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli ATCC 8739] gi|169888794|gb|ACB02501.1| conserved protein [Escherichia coli str. K-12 substr. DH10B] gi|170521394|gb|ACB19572.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5] gi|187427536|gb|ACD06810.1| tetratricopeptide repeat protein [Shigella boydii CDC 3083-94] gi|187769262|gb|EDU33106.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4196] gi|188016626|gb|EDU54748.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4113] gi|188491386|gb|EDU66489.1| tetratricopeptide repeat protein [Escherichia coli 53638] gi|188998726|gb|EDU67712.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4076] gi|189356792|gb|EDU75211.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4401] gi|189361584|gb|EDU80003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4486] gi|189367076|gb|EDU85492.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4501] gi|189371824|gb|EDU90240.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC869] gi|189377972|gb|EDU96388.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC508] gi|190908837|gb|EDV68425.1| tetratricopeptide repeat protein [Escherichia coli F11] gi|194417945|gb|EDX34040.1| tetratricopeptide repeat protein [Shigella dysenteriae 1012] gi|194423918|gb|EDX39906.1| tetratricopeptide repeat protein [Escherichia coli 101-1] gi|208724590|gb|EDZ74298.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4206] gi|208732956|gb|EDZ81644.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4045] gi|208742091|gb|EDZ89773.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4042] gi|209158039|gb|ACI35472.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4115] gi|209771898|gb|ACI84261.1| putative heat shock protein [Escherichia coli] gi|209771900|gb|ACI84262.1| putative heat shock protein [Escherichia coli] gi|209771902|gb|ACI84263.1| putative heat shock protein [Escherichia coli] gi|209771904|gb|ACI84264.1| putative heat shock protein [Escherichia coli] gi|209771906|gb|ACI84265.1| putative heat shock protein [Escherichia coli] gi|209911780|dbj|BAG76854.1| putative heat shock protein [Escherichia coli SE11] gi|215264649|emb|CAS09020.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] gi|217317580|gb|EEC26008.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14588] gi|218351587|emb|CAU97299.1| conserved hypothetical protein [Escherichia coli 55989] gi|218360604|emb|CAQ98162.1| conserved hypothetical protein [Escherichia coli IAI1] gi|218426836|emb|CAR07688.2| conserved hypothetical protein [Escherichia coli ED1a] gi|222033086|emb|CAP75826.1| Uncharacterized protein yciM [Escherichia coli LF82] gi|226900064|gb|EEH86323.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227836490|gb|EEJ46956.1| lipopolysaccharide N-acetylglucosaminyltransferase [Escherichia coli 83972] gi|238860472|gb|ACR62470.1| conserved protein [Escherichia coli BW2952] gi|253324764|gb|ACT29366.1| Tetratricopeptide domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973261|gb|ACT38932.1| hypothetical protein ECB_01257 [Escherichia coli B str. REL606] gi|253977475|gb|ACT43145.1| hypothetical protein ECD_01257 [Escherichia coli BL21(DE3)] gi|254592270|gb|ACT71631.1| conserved protein [Escherichia coli O157:H7 str. TW14359] gi|257753627|dbj|BAI25129.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368] gi|257764085|dbj|BAI35580.1| conserved predicted protein [Escherichia coli O111:H- str. 11128] gi|260449588|gb|ACX40010.1| Tetratricopeptide domain protein [Escherichia coli DH1] gi|290762242|gb|ADD56203.1| hypothetical protein G2583_1621 [Escherichia coli O55:H7 str. CB9615] gi|291324460|gb|EFE63882.1| yciM protein [Escherichia coli B088] gi|294493956|gb|ADE92712.1| tetratricopeptide repeat protein [Escherichia coli IHE3034] gi|299881082|gb|EFI89293.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] gi|300301857|gb|EFJ58242.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|300309315|gb|EFJ63835.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] gi|300318503|gb|EFJ68287.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|300400130|gb|EFJ83668.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] gi|300403078|gb|EFJ86616.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|300411195|gb|EFJ94733.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|300413486|gb|EFJ96796.1| tetratricopeptide repeat protein [Escherichia coli MS 115-1] gi|300417332|gb|EFK00643.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|300452119|gb|EFK15739.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|300464182|gb|EFK27675.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|300528468|gb|EFK49530.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|300840364|gb|EFK68124.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|300846374|gb|EFK74134.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] gi|301074585|gb|EFK89391.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|305852968|gb|EFM53413.1| tetratricopeptide repeat protein [Escherichia coli NC101] gi|306909683|gb|EFN40177.1| tetratricopeptide repeat protein [Escherichia coli W] gi|307553341|gb|ADN46116.1| tetratricopeptide repeat protein [Escherichia coli ABU 83972] gi|307627143|gb|ADN71447.1| tetratricopeptide repeat protein [Escherichia coli UM146] gi|308122832|gb|EFO60094.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|309701580|emb|CBJ00887.1| tetratricopeptide repeat protein [Escherichia coli ETEC H10407] gi|310336069|gb|EFQ01269.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] gi|312945917|gb|ADR26744.1| tetratricopeptide repeat protein [Escherichia coli O83:H1 str. NRG 857C] gi|313848615|emb|CAQ31785.2| conserved protein [Escherichia coli BL21(DE3)] gi|315060533|gb|ADT74860.1| Predicted N-acetylglucosaminyl transferase [Escherichia coli W] gi|315135918|dbj|BAJ43077.1| hypothetical protein ECDH1ME8569_1221 [Escherichia coli DH1] gi|315254320|gb|EFU34288.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1] gi|315289121|gb|EFU48519.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3] gi|315295312|gb|EFU54642.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1] gi|315297196|gb|EFU56476.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3] gi|315619361|gb|EFU99905.1| tetratricopeptide repeat family protein [Escherichia coli 3431] gi|320177284|gb|EFW52289.1| tetratricopeptide repeat protein [Shigella dysenteriae CDC 74-1112] gi|320189967|gb|EFW64619.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC1212] gi|320195705|gb|EFW70330.1| tetratricopeptide repeat protein [Escherichia coli WV_060327] gi|320199316|gb|EFW73907.1| tetratricopeptide repeat protein [Escherichia coli EC4100B] gi|320637177|gb|EFX07003.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. G5101] gi|320642543|gb|EFX11791.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str. 493-89] gi|320647896|gb|EFX16604.1| tetratricopeptide repeat protein [Escherichia coli O157:H- str. H 2687] gi|320653498|gb|EFX21603.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659198|gb|EFX26787.1| tetratricopeptide repeat protein [Escherichia coli O55:H7 str. USDA 5905] gi|320663991|gb|EFX31178.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. LSU-61] gi|323153286|gb|EFZ39544.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14] gi|323172362|gb|EFZ57999.1| tetratricopeptide repeat family protein [Escherichia coli LT-68] gi|323179766|gb|EFZ65327.1| tetratricopeptide repeat family protein [Escherichia coli 1180] gi|323187513|gb|EFZ72822.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1] gi|323378905|gb|ADX51173.1| tetratricopeptide repeat protein [Escherichia coli KO11] gi|323942397|gb|EGB38567.1| TPR repeat-containing protein [Escherichia coli E482] gi|323947437|gb|EGB43441.1| TPR repeat-containing protein [Escherichia coli H120] gi|323953847|gb|EGB49648.1| TPR repeat-containing protein [Escherichia coli H263] gi|323962582|gb|EGB58162.1| TPR repeat-containing protein [Escherichia coli H489] gi|323973478|gb|EGB68664.1| TPR repeat-containing protein [Escherichia coli TA007] gi|324006106|gb|EGB75325.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2] gi|324011303|gb|EGB80522.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1] gi|324018891|gb|EGB88110.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3] gi|324117526|gb|EGC11432.1| TPR repeat-containing protein [Escherichia coli E1167] gi|326341058|gb|EGD64851.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. 1125] gi|326343298|gb|EGD67065.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. 1044] gi|331038641|gb|EGI10861.1| putative heat shock protein [Escherichia coli H736] gi|331050601|gb|EGI22659.1| putative heat shock protein [Escherichia coli M718] gi|331055578|gb|EGI27587.1| putative heat shock protein [Escherichia coli TA206] gi|331070029|gb|EGI41398.1| putative heat shock protein [Escherichia coli TA280] gi|331075750|gb|EGI47048.1| putative heat shock protein [Escherichia coli H591] gi|332091675|gb|EGI96755.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82] gi|332098116|gb|EGJ03089.1| tetratricopeptide repeat family protein [Shigella dysenteriae 155-74] gi|332101878|gb|EGJ05224.1| tetratricopeptide repeat protein [Shigella sp. D9] gi|332342874|gb|AEE56208.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 389 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|298529505|ref|ZP_07016908.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510941|gb|EFI34844.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] Length = 241 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 7/174 (4%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 D + A R KAL++ PD + Q A + + A Sbjct: 70 EDWDRAARDFEKALELKPDYGEAWNNLGQVRKAQGRTQEARQAYEAALEIEEYMTPEFAY 129 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + ++GD+ + A+ S++ + A + +A I E+ Sbjct: 130 --YNLASLFQEEGDLERALEYAVNSVEKNRRFVPGYDLAGSLYQELDLYDEALRIFERGA 187 Query: 288 KVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + P + ++ Y + + + + E N +S E+ + ++ LE Sbjct: 188 QAMPGNARLSLAYAEELVRAGRDSEAITWFEHVIEQNDDSQEAQM--ARDYLEA 239 >gi|294142615|ref|YP_003558593.1| hemY protein [Shewanella violacea DSS12] gi|293329084|dbj|BAJ03815.1| hemY protein, putative [Shewanella violacea DSS12] Length = 389 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 70/402 (17%), Positives = 135/402 (33%), Gaps = 29/402 (7%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M R++ Y +I L +C + T + T + L F L+ Sbjct: 1 MTRVLIYLGIILLGLCISPFFEGMNGYLYFTIWDYEVETGVIFAIIALIVFYALLQLVEW 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHTFHNE 119 V F ++ ++ +K K G +++A + A K M + Sbjct: 61 VIIFSINLLLNSRYLPNKWRKKAARKHTLMGALALAEEDWSTAEKAMIKGAEKGELPTLN 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV-----YSLYFESCRIGDLNSAQ 174 L Q + + +K + + AV L+ + G+L+ A+ Sbjct: 121 LLAAARAAQ----HQNNTESRDKYLLQAEQEPLALKAVSTSRTRYLFQQ----GELDKAR 172 Query: 175 RYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAI 227 K +SP P V ++ Y +W+ A+ L +K++ E + Sbjct: 173 IELDK---LSPTSNSKLP-VLRLAIELYKAQADWN-ALKLLLPIIKKRQVLNEEDSKSLT 227 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVILEK 285 +L SL + L + A+ SL N++ +A+ +L K Sbjct: 228 MLTNNSLLIQAQSSSEQELEKVWHWLSRAERKEP-VYIASYSLGLHKFNREAEAKKLLMK 286 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 K + + +LS V + K+ LE+ E + +++ + L+ QA Sbjct: 287 QIKSDLCSNTTSALVKVLSPADVEERKQIFLLEKKYGEKLSFQKLLANLHLQNSDYRQAI 346 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 A P K +L L + + I + Q+A+ Sbjct: 347 AYWKKVCNQEPNKANWLALGETHEHLGEQNGAIQSYRQAAVS 388 >gi|262305045|gb|ACY45115.1| acetylglucosaminyl-transferase [Streptocephalus seali] Length = 289 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 8/166 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 34 GMVQEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + + + A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDINGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + + D G++ + +LKL + A Sbjct: 151 INPGF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDA 192 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A N + + A L + Sbjct: 10 KRAIELQPNFPDAYCNLANALKEKGMVQEAEDCYNTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMGDINGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|255034468|ref|YP_003085089.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254947224|gb|ACT91924.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM 18053] Length = 330 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 11/165 (6%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 + +NE ++ L QI A K + A +L F + GD A Sbjct: 11 SLNNEGVILFLNGQI-------EEAIAKYRQAIAAEPDNASAHNNLGFALAQQGDFEQAS 63 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + +L++ P+ + +++ ++S A R+ A + + + Sbjct: 64 EHYRLSLELDPENDNTWLNLGNLKMMSGDYSGARDLFENAL----NITRDIANVWESYAK 119 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 D A+ + ++L++ +S + +LI+ K +A Sbjct: 120 LMTISDDPSAAVNAWQQALRIHPHSPDYHLELGIALIADGKHSQA 164 >gi|225680653|gb|EEH18937.1| pre-mRNA-splicing factor prp1 [Paracoccidioides brasiliensis Pb03] Length = 941 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 29/161 (18%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R +A + +P+ + A V+ AK+ A L+ ++ A Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADAKQTEHARELLSTARREAG 675 Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250 + R L N ++ + Sbjct: 676 TDRVWIKSVAFERQLGNTDRALDLVNQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + C S+ + A++ KA IL++ P Sbjct: 736 TGTRACPKSVPIWLLASRLEEKAGVVVKARSILDRARLAVP 776 >gi|218777993|ref|YP_002429311.1| hypothetical protein Dalk_0133 [Desulfatibacillum alkenivorans AK-01] gi|218759377|gb|ACL01843.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 616 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 71/211 (33%), Gaps = 34/211 (16%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 ++A Y KA+ P++ ++ + +++ V + A+ K + R +L+ Sbjct: 104 DAASLYLDKAIAKDPESRFLKQGLLEILVEKGNYQGALEESALLLKEDPDNVR----VLL 159 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 R+ + + LK A++ N+ KA + ++ Sbjct: 160 TRAAVLLQLKKWNEASAVYEKVLKTAPEESQTYFLLAETYHKANQPEKAISVYQR----- 214 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + L + + + + + ++A MG A Sbjct: 215 --------FIENLPNS---------------PDVISAWFFIGRVAYNMGDYALAAQAFEE 251 Query: 351 AMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 + + P +++ L LA++ + N +K+ Sbjct: 252 TLLLKPDFEQVQLNLAEVYR-ELGNDEKVQA 281 >gi|195377617|ref|XP_002047585.1| GJ11852 [Drosophila virilis] gi|194154743|gb|EDW69927.1| GJ11852 [Drosophila virilis] Length = 931 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 38/219 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 686 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + +LK C SI I +A + Sbjct: 687 LLAEAVEVFPEFPKLWMMKGQIEEQQKRTDDAAATYTLALKKCPTSIPLWILSANLEERK 746 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 KA ILE+ N P++A ++ + LK Sbjct: 747 GVLTKARSILERGRLRN--PKVAVLWLEAIRVELRAGLK 783 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|253701092|ref|YP_003022281.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M21] gi|251775942|gb|ACT18523.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter sp. M21] Length = 882 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 28/247 (11%), Positives = 71/247 (28%), Gaps = 9/247 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 +A + A E+ ++ L + ++ +A KA+ + Sbjct: 639 AYVAMNDSSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRADGKSV 698 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A+ Y KE+ +A+ + + + + K A Sbjct: 699 EARIALGNLYQATKEYDKALASYQYAHRMNPDSVAAQFAIGALYDSTGKKKQAADAYRAV 758 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSE 305 ++ + + A K +A + +K P +P + + Y + Sbjct: 759 LQKNDRYVPALNNLAYLCADGY---GSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNG 815 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM---KIAPRKEIFL 362 + +K R + + G ++ ++ + K Sbjct: 816 RSADAVKVMERAVALLPNDPTVRYHLGLAYYLAGDRARSEQALQKSLSLGQSPDTKAAQT 875 Query: 363 LLAQIEQ 369 LLA++++ Sbjct: 876 LLAELKR 882 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 99/289 (34%), Gaps = 36/289 (12%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A LA + + Q+ LL ++++ A L+ L+ Sbjct: 413 AEGETELATAVQAAPDAQN-------SRLLLASYYQSQKKPAKALSTLKSGLKGGKGDVP 465 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-- 213 ++ G+ + +A + P + + + ++ RA+ LNQ Sbjct: 466 LYNAIASLQLSAGNKAEGIKTLEQAKRLDPGFAATYQNLAGVHAATGDYPRAMAELNQLL 525 Query: 214 --------------------KKKNAKEWNRNRAI------LLIARSLENADKGDMIASYH 247 K+ +A +A + + KGD + Sbjct: 526 TRDAGNLRALLGLAALSEISGKETDAVAYYQKATQTKAPEAFLALAGYHQKKGDAAKAIA 585 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSEN 306 E +KL +I A + L SQ + +KA + +++ +N +A I ++ + Sbjct: 586 VLDEEIKLDPRAISALEAKGRILASQKEYQKALKVFDQVEALNEERGVALKIGAYVAMND 645 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +++A RL S + ++++ + + +I A + A++ Sbjct: 646 SSKAVEQAGRLIAKRPGSSQGYLLLATVHQSLRNIPAAINEVNKAIRAD 694 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 12/183 (6%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-----LAERQYNIAHEKLEMMLQI 149 IA N+ A K + + + + + Q A + + A + +LQ Sbjct: 702 IALGNLYQATKEYDKALASYQYAHRMNPDSVAAQFAIGALYDSTGKKKQAADAYRAVLQK 761 Query: 150 PATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 A+ +L Y + G A R A A P P V + V + A+ Sbjct: 762 NDRYVPALNNLAYLCADGYGSKEEALRLAISAFKQQPGNPGVMDTVGYALAKNGRSADAV 821 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL--CDNSIMASICA 266 + + R L +A L GD S +SL L ++ A Sbjct: 822 KVMERAVALLPNDPTVRYHLGLAYYL----AGDRARSEQALQKSLSLGQSPDTKAAQTLL 877 Query: 267 AKS 269 A+ Sbjct: 878 AEL 880 >gi|157812780|gb|ABV81135.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Prodoxus quinquepunctellus] Length = 287 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVSEAEECYNTALRLCPSHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPSFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ--PSFAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|21229659|ref|NP_635576.1| hypothetical protein XCC0181 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766535|ref|YP_241297.1| hypothetical protein XC_0190 [Xanthomonas campestris pv. campestris str. 8004] gi|188989596|ref|YP_001901606.1| hypothetical protein xccb100_0200 [Xanthomonas campestris pv. campestris str. B100] gi|21111140|gb|AAM39500.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571867|gb|AAY47277.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167731356|emb|CAP49531.1| hypothetical protein xcc-b100_0200 [Xanthomonas campestris pv. campestris] Length = 690 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + + +PD + + A+ + E Sbjct: 6 LQALRRNAADDAVALAREWVTSAPDLSAAHRWLGLSLQQQGQPVLALASIEAAL----EL 61 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ + S L N A + A +++ +AE Sbjct: 62 TPEDADLHLLRAGLLLAVRDVPGADAALSRSTTLDPNQFNAYVMQAHLAVARGDLDEAER 121 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + + L R E + + + L+ Sbjct: 122 LSRTAARLAPEHPQLLAVDGVVEMRRGQSDRALSLLTRAAEQLPDDARVMFALGFAYLQK 181 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 182 EHFAFAERAFERVVELNP 199 Score = 37.2 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 61/191 (31%), Gaps = 24/191 (12%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + GDL+ A+R + A ++P+ P + VV+ + RA++ L + + + Sbjct: 110 AVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMRRGQSD--RALSLLTRAAEQLPD- 166 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A ++ A K + ++L A+ Q + A Sbjct: 167 ---DARVMFALGFAYLQKEHFAFAERAFERVVELNPPGTALRAFIAQLAQRQGRLDDALS 223 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ + P +I + +L + L+ + V+ + L + Sbjct: 224 AMQGV-LAQPGGDI----------PAMRRLAGEMELQAGRPDQ-----AVAHLRLALAHW 267 Query: 342 DQAHAKAMLAM 352 + Sbjct: 268 PADRRTLHALL 278 >gi|169769488|ref|XP_001819214.1| pre-mRNA-splicing factor prp1 [Aspergillus oryzae RIB40] gi|83767072|dbj|BAE57212.1| unnamed protein product [Aspergillus oryzae] Length = 938 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 120/335 (35%), Gaps = 47/335 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SIA AR +++Y F N ++L A ER + +++ + Sbjct: 549 SIARGKYETARAIYAYA--LRVFVNRRSIWL---AAADLERNHGTKEALWQVLEKAVEAC 603 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + E + L E + G+++ A+R +A + +P+ + A V+ A++ +A Sbjct: 604 PQSEELWLL-LAKEKWQTGEIDEARRVLGRAFNQNPNNEDIWLAAVKLEADARQTDQARE 662 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKG----------------------------- 240 L ++ A + R L NA++ Sbjct: 663 LLATARREAGTDRVWVKSVAFERQLGNANEALDLVNQGLQLYPKADKLWMMKGQIYESQN 722 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + C S+ + A++ KA +L++ P+ A ++T Sbjct: 723 KYPQAREVYGTGTRACSRSVPLWLLASRLEEKAGAVVKARSVLDRARLAV--PKSAELWT 780 Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356 + E + +A L +E S ++ S+ LE + +A + K+ Sbjct: 781 ESVRVERRANNIAQAKILMAKALQEVPTSGLLWSESIWHLEPRAQRKARS-LEAIKKVDN 839 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F+ +A+I +K + W + A+ + D Sbjct: 840 DPILFITVARIFWGERR-LEKAMTWFEKAIVSDSD 873 >gi|87310659|ref|ZP_01092787.1| hypothetical protein DSM3645_26724 [Blastopirellula marina DSM 3645] gi|87286640|gb|EAQ78546.1| hypothetical protein DSM3645_26724 [Blastopirellula marina DSM 3645] Length = 885 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 11/146 (7%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P + + +++ A K + R ++ + + D Sbjct: 192 APRYAGAYITAAELALAKNDFALAAEDFQNALKIDPDNPR-----ILYGLARSFEPSDSK 246 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP---EIANIY 299 + E+L + + + + + AA+ + + + E +LE++ K+NP P I + Sbjct: 247 KAEQYLNEALAINPHHVPSLLLAAEEHLQAERYEETEKLLEQVLKINPVQPKAWAIRAVL 306 Query: 300 THLLSENTVGKLKRALRLEEI--NKE 323 HL S++ RA L+ N + Sbjct: 307 AHLSSDSEQETQARAKALQHWTDNPD 332 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 93/252 (36%), Gaps = 25/252 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQR-YATKA 180 LL+++ L +Y A + LE + T + + + R G+ A+ A A Sbjct: 89 RLLKLESELILGRYADAVQTLEE-AKKVNTYSIRLRWIERDVRRFQGESAKAKEVLAEIA 147 Query: 181 LDI-----SPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 ++ +P + + ++ + + T L ++ + A I Sbjct: 148 AEVERSSGRYRSPEDMVVIGQFFLEI---GADPKQIRTTLFKQVQQRAP---RYAGAYIT 201 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + K D + D +LK+ ++ A+S + +KAE L + +NP Sbjct: 202 AAELALAKNDFALAAEDFQNALKIDPDNPRILYGLARS-FEPSDSKKAEQYLNEALAINP 260 Query: 292 H--PEIA-NIYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAH 345 H P + HL +E K ++ +IN ++ +++ ++ + QA Sbjct: 261 HHVPSLLLAAEEHLQAERYEETEKLLEQVLKINPVQPKAWAIRAVLAHLSSDSEQETQAR 320 Query: 346 AKAMLAMKIAPR 357 AKA+ P Sbjct: 321 AKALQHWTDNPD 332 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 62/193 (32%), Gaps = 30/193 (15%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++ ++ ++ A+ L + KK R R I +G+ + E Sbjct: 93 LESELILGRYADAVQTLEEAKKVNTYSIRLRWI----ERDVRRFQGESAKAKEVLAE--- 145 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 AA+ S + R E ++ I + + ++ + Sbjct: 146 ----------IAAEVERSSGRYRSPEDMVV----------IGQFFLEIGADPKQIRTTLF 185 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSH 373 ++++ + + +++AL A A+KI P I LA+ Sbjct: 186 KQVQQRAPRYAGAYITAAELALAKNDFALAAEDFQNALKIDPDNPRILYGLAR--SFEPS 243 Query: 374 NTDKILYWTQSAL 386 ++ K + AL Sbjct: 244 DSKKAEQYLNEAL 256 >gi|291571512|dbj|BAI93784.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 491 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 71/241 (29%), Gaps = 23/241 (9%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A A +Y A + L+I +A +L G L A +AL + P+ Sbjct: 37 AARAAGRYREAEQIWREFLEIEPNNAYAHNNLGVALYHQGKLPEAIEAYRRALALDPNNA 96 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W + + AI + A + N A + +L ++G + + Sbjct: 97 WAHNNLGLALADQGKLPEAIEAYRRAL--ALDSNNAYAHNNLGVAL--RNQGKLPEAIEA 152 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTH--- 301 +L L N+ A +L Q K +A P P A+ H Sbjct: 153 YRRALALDPNNAYAHNNLGYALYLQGKLPEAIDAYRTA-LALPDRRGTPASAHTLAHNNL 211 Query: 302 ----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + G + + ++ ++ L+ A + P Sbjct: 212 GLALQQQGDLPGAIAEYKKAIRLDPN-----FAIAYSNLQEAERLLALR--GNPLPANPT 264 Query: 358 K 358 + Sbjct: 265 E 265 >gi|301168178|emb|CBW27767.1| putative exported protein [Bacteriovorax marinus SJ] Length = 606 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 16/140 (11%) Query: 172 SAQRYATKA-------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +A + +A L P + + + Y L ++ +A + LN+ ++++K Sbjct: 147 TALKEKREAQLVYLSILKNFPSSEEACVFLAKSYSLESKFKKAFSLLNKCERSSK----G 202 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +AI R +G++ ++ + +SL++ A+I + K A + E Sbjct: 203 KAIYSFYRGKIEIARGNIKSAQKNFKKSLRVDPTYQQAAIGLGAIYEEEKKFANALEVYE 262 Query: 285 KIWKVNPHPEIANIYTHLLS 304 K K +PH Y L + Sbjct: 263 KFLKKSPH-----AYAILKN 277 >gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera] Length = 1091 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 7/165 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + ++ Y A ++ P Y L ++GD S+ K L++ Sbjct: 312 ARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEV 371 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ +A+ YV + +A +L + K + +A L + L +D G + Sbjct: 372 YPENCEALKALGHIYVQLGQTEKAQEYLRKATK--IDPRDAQAFLDLGELLITSDTGAAL 429 Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286 ++ A LK + + + + AE ++ Sbjct: 430 DAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEA 474 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 88/302 (29%), Gaps = 51/302 (16%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 Y +E ++ + Q+ LA+ A +++L A+ G Sbjct: 117 YNKASRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRG 176 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKNAKEWNRNRAI 227 + + +AL + PD P + ++ +A + + E N + Sbjct: 177 RYSDSLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPE-NVEALV 235 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----------------------SIC 265 L L D + + ++ MA + Sbjct: 236 ALGIMDLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETAL 295 Query: 266 A---------------AKSLISQNKKRKA-----EVILEKIWKVNPH----PEIANIYTH 301 A A+S S+ KA + E PH P Sbjct: 296 AVTNHGPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKES---NKPHDFVLPYYGLGQVQ 352 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L + L ++ E+ E+ E+L + I +++G ++A A KI PR Sbjct: 353 LKLGDFRSSLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQA 412 Query: 362 LL 363 L Sbjct: 413 FL 414 >gi|303287102|ref|XP_003062840.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455476|gb|EEH52779.1| predicted protein [Micromonas pusilla CCMP1545] Length = 138 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 AK W A+ + + RA L R+ + + ++ +L+ + Sbjct: 10 AKNWKEALNSYQKALEMTMAGTEERASLYSNRAACFLMENRYREAIRESDAALESKPDFK 69 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A + +++ N+ KA LE KV+P Sbjct: 70 PALVRRSRAYEQINEYSKAVSDLESALKVDP 100 >gi|224073548|ref|XP_002195417.1| PREDICTED: similar to laminin, gamma 3 [Taeniopygia guttata] Length = 1546 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 97/285 (34%), Gaps = 25/285 (8%) Query: 82 DKGYKALYTGL--MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ---Y 136 + + L G+ +++ A A + + L +L VQ A ++ Sbjct: 1186 QRAQEELGAGMAEVAVGARRAVTAVEQAHADLAERLLQVAALGQVLPVQAADLAQELAVL 1245 Query: 137 NIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 A E + Q L E R Q A A D++ A +AV+ Sbjct: 1246 EQAAAAQEPLAQRAVEASHTLAAGLQLELQRTQSFKQLQDQAGSAHDMATMAVSRGKAVL 1305 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 S A + L + K ++ + R + M+ + ++ K Sbjct: 1306 ---------SDAESLLASLEGMKKVLGHQKSQAALRRRMATVRDRVMVDAQRKIKQAEKT 1356 Query: 256 CDNSIMASICAAKS-----LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 NS+ SI A ++ IS+ ++A +L++ H + T + Sbjct: 1357 LGNSLSISITAQRTAGEAEQISEGSAKRARAVLQESKHALKH----ASQLTTRANETQWE 1412 Query: 311 LKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L R + ++ + E+ + S+++ S+ +A M ++ Sbjct: 1413 LSRQEHMAEKLRADLEEAQQVGSEVSEMAKSLQEARGSLMSDIET 1457 >gi|86159982|ref|YP_466767.1| hypothetical protein Adeh_3564 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776493|gb|ABC83330.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 433 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 48/173 (27%), Gaps = 31/173 (17%) Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + + + +AR E +GD + +L+L ++ Sbjct: 2 ARRADGGDGLDDELAFHLARGTELLAQGDADRARAALERALELGPKDAKVLALLGQACYR 61 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 Q + A W RL + N + V + Sbjct: 62 QGQFDDAA----IAW---------------------------QRLVDENPVEPAARVNLG 90 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 L+ ++A + +A+ + P + + S + W + A Sbjct: 91 LAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAAAREWFRKA 143 Score = 40.3 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 2/135 (1%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G +A + AR + + V L Q + Q++ A + ++ Sbjct: 19 LARGTELLAQGDADRAR--AALERALELGPKDAKVLALLGQACYRQGQFDDAAIAWQRLV 76 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 A +L + A+R ALD++PD + + + + + A Sbjct: 77 DENPVEPAARVNLGLAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAAA 136 Query: 208 ITFLNQKKKNAKEWN 222 + + + Sbjct: 137 REWFRKAGSDHMVAR 151 >gi|114319442|ref|YP_741125.1| tetratricopeptide TPR_4 [Alkalilimnicola ehrlichii MLHE-1] gi|114225836|gb|ABI55635.1| Tetratricopeptide TPR_4 [Alkalilimnicola ehrlichii MLHE-1] Length = 584 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 88/267 (32%), Gaps = 16/267 (5%) Query: 126 EVQIALAERQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD- 182 Q+A+ + + + A L+ L + L R G+ + A + ++ L+ Sbjct: 103 AAQLAIIQGRLDDALAALQRWDALDDDNAEVDRLLGLL--HLRAGEPDRAYHHLSRYLET 160 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + + + + + + L + + A +A + G + Sbjct: 161 LDGEVRQAFQGLGELMGREARADDVLQVLER----LADEYAGHASAQVALARAAMQLGRL 216 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + + +L + + ++L++ ++ A ++E + + H Sbjct: 217 ETALEASRRAAELDPDWQAPRMLEVQALVNLDRPEAALDVVE-ALLAQDAEDRSLRMLHA 275 Query: 303 L----SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PR 357 + L+ L + +E + +A ++ DQA K A R Sbjct: 276 RLLVNMGHRERALEEFEVLMAQRPDDLEVAYAAALLATDLRRWDQAREYWQFIAKRAYQR 335 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQS 384 E F L +I + N ++ W + Sbjct: 336 AEAFYRLGRIAEQE-GNREEARAWYER 361 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 48/167 (28%), Gaps = 10/167 (5%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G A AL+ P + A V + + A L + + A Sbjct: 416 QGRAGEAVALLDDALEAEPGDHSLLYARALARVETGDLAGAEADLRAILADEPD----DA 471 Query: 227 ILLIARSLENADKGDMIA-SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L A AD G+ + + +L + L K A LE+ Sbjct: 472 HALNALGYTLADAGERLEEARELIARALAQEPDHPAILDSKGWVLYRLGKPEAALDYLER 531 Query: 286 IWKVNPHPEIAN-----IYTHLLSENTVGKLKRALRLEEINKESVES 327 W P PEI ++ E + A LE + E+ Sbjct: 532 AWARQPDPEIGAHLGEVLWVLGRREEARAIWEAAEELEADHPVLRET 578 >gi|320181725|gb|EFW56636.1| tetratricopeptide repeat protein [Shigella boydii ATCC 9905] Length = 389 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGECAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|319792198|ref|YP_004153838.1| hemy domain protein [Variovorax paradoxus EPS] gi|315594661|gb|ADU35727.1| HemY domain protein [Variovorax paradoxus EPS] Length = 427 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 54/389 (13%), Positives = 106/389 (27%), Gaps = 45/389 (11%) Query: 23 HYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYD 82 + +++ W S ++L IL + S P ++ Sbjct: 23 NNQGTITVFWPPWRVDLSLNLVLVILLGTFVLLHVALRALAALFSLPTQARQWRLQQKER 82 Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYV----SQQHTFHN--------EYLVYLLEVQIA 130 + AL ++ + A ARK L +LL + A Sbjct: 83 TLHAALLDAMVQLIAGRFSRARKAAQSALVQEKTLAALDANLPQAQQVRVLSHLLAAESA 142 Query: 131 LAERQY---------NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 A + + +L P TRE + + R + A L Sbjct: 143 QALQDKPARDAHLQQALKESVDRTLLASPETRE----GVQLRAARWALEDRDAAAALARL 198 Query: 182 DISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + P ++ + A A+ K+ + ++ + E Sbjct: 199 EELPQGAQRRTLALRLRLKAARQDRRTLEALETARLLAKHRAFSDAAAQSIVRGLATELL 258 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWK---VNPH 292 A A L + + A + ++ A L W+ NP Sbjct: 259 SGAHDPAQLMRAWSELDTNEREMPEVAIHGAQRMVLLHGDLSLARGWLLPAWERMVANPR 318 Query: 293 P-------EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 ++A L L R + N + ++ +A Sbjct: 319 GLGDALRVKLARALEAGLDSVDADWLARIESAQRNNPRDANLQYLAGMACMKRQLWGKAQ 378 Query: 346 A---KAMLAMKIAP-RKEIFLLLAQIEQA 370 +A LA++ A + +L LA++ +A Sbjct: 379 QLLTQAGLALQDAELYRRAWLALAELAEA 407 >gi|307611344|emb|CBX01005.1| hypothetical protein LPW_27071 [Legionella pneumophila 130b] Length = 577 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%) Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180 L Q E A E + Q P T L + ++GD+ +A Y +A Sbjct: 8 LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 I+P+ + + Y A + AI + + + E+ + L +L N Sbjct: 66 RKINPNDVGILNNLANAYKKAGQLDEAIKYYQEAIEIKPEYVQAHNNLAATYALLN---- 121 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + H + ++ + A L+ + A+ + +NP H E A Y Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHRE-AQFY 180 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 HL + ++ E + E V+SL+ + IAL+ A A+ + Sbjct: 181 LGILHLEDNLLAEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239 >gi|281209859|gb|EFA84027.1| TPR repeat-containing protein [Polysphondylium pallidum PN500] Length = 935 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 81/219 (36%), Gaps = 25/219 (11%) Query: 166 RIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IGD+ A+ + +P W+ A ++ + S+A ++Q + + Sbjct: 275 EIGDIKKARLLFKSVIQTNPKHAPGWIAAAKLEMLA--GKLSQARKIISQGCQECPDNEE 332 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +ENA+ + +++KL S+ + A + R + IL Sbjct: 333 VW--------IENANLQTPDNAKAVLAQAVKLIPQSVKVWLYATNL---EKDIRMKKKIL 381 Query: 284 EKIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + + P ++ L ++ L RA E ++VE + ++ + + Sbjct: 382 RRALEFIPTSVKLWKEAIELEEPDDARIMLGRA---VECVSDNVELWLALA----NLETY 434 Query: 342 DQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKIL 379 ++A A + P I++ AQ+E++ N + Sbjct: 435 EKAREVLNRARQSIPTSSEIWIAAAQLEESAKKNENVSR 473 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 84/259 (32%), Gaps = 36/259 (13%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E GD++ A+ T+A + +P + + A V+ E A L + A Sbjct: 605 KEKWLAGDVDQARSILTQAFESNPGSEEIWLAAVKIESEMNEIKVARGLLKRAIDMAATE 664 Query: 222 NRNRAILLIARSLENADKGDMIAS-------------------------------YHDAI 250 L+ R + + I + Sbjct: 665 RIWMKSALLEREFGESKAENDILAEGLKAFPTSWKLWLMKAQLEERVNPRALDKIRDIYN 724 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 ++ C +SI + + N ++KA +LEK NP E IY + E +VG Sbjct: 725 SAVTKCPSSIPLWLEFVRFEKRANNQQKARTLLEKAKLRNPKNE--EIYLEFVRFEKSVG 782 Query: 310 KLKRALR-LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 K A L +E +S ++ ++ Q + K + + +A+I Sbjct: 783 NAKAAANWLSVGLQECPKSGLLWAEAIANEPKHGQKNKCVDALNKCNNDQYVLTQVAKIF 842 Query: 369 QANSHNTDKILYWTQSALH 387 + DK W + A+ Sbjct: 843 WFDGK-LDKAKSWFKRAIT 860 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 7/124 (5%) Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309 +++K C + + + AK +A IL + ++ NP EI + SE + Sbjct: 588 QAIKNCPHYEVLWLMYAKEKWLAGDVDQARSILTQAFESNPGSEEIWLAAVKIESE--MN 645 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK---AMLAMKIAPRKEIFLLL-A 365 ++K A L + + + I K AL ++ A+ +K P L+ A Sbjct: 646 EIKVARGLLKRAIDMAATERIWMKSALLEREFGESKAENDILAEGLKAFPTSWKLWLMKA 705 Query: 366 QIEQ 369 Q+E+ Sbjct: 706 QLEE 709 >gi|239905040|ref|YP_002951779.1| putative response regulator receiver protein [Desulfovibrio magneticus RS-1] gi|239794904|dbj|BAH73893.1| putative response regulator receiver protein [Desulfovibrio magneticus RS-1] Length = 455 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 69/170 (40%), Gaps = 11/170 (6%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +L R+ GD+ + A ++ ++ +S+ A + +++ +AE + Sbjct: 161 VLFDRAAALLAAGDLDQAARVAAKAFEIKPDSLKAHLLLGDVALAKGDHAQAESHYKDAA 220 Query: 288 KVN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + P + +YT + + +L RL+E++ + E ++ + L++G D Sbjct: 221 RAEKLYIEPLKRLVEVYT--QTGDDAKRLACLTRLDELSPLNFERKAVIGEAYLDLGEND 278 Query: 343 QAHA----KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 +A A + K+A L+ ++ + + L + A+ A Sbjct: 279 KARAFFEEARKVVGKVASDMVSDALMEMAKRIGERDQETALRFVTEAIEA 328 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 62/219 (28%), Gaps = 63/219 (28%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE------------------------ 126 G +++A + A + ++ + E L L+E Sbjct: 200 GDVALAKGDHAQAESHYKDAARAEKLYIEPLKRLVEVYTQTGDDAKRLACLTRLDELSPL 259 Query: 127 --------VQIALAERQYNIAHEKLEM-----------MLQIPATREFAVYSLYFESCRI 167 + L + + A E M+ L + RI Sbjct: 260 NFERKAVIGEAYLDLGENDKARAFFEEARKVVGKVASDMVSDA---------LMEMAKRI 310 Query: 168 G--DLNSAQRYATKALD-----ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 G D +A R+ T+A++ + P W+ W A + A Sbjct: 311 GERDQETALRFVTEAIEAKGEALGPKDLWMFNNRGILLRRQGNWREAAENYRKALSIAP- 369 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + A L + +A+ D + E+LKL + Sbjct: 370 ---SDAGLRYNLGVAHAEGKDYYTALTHFEEALKLDPDL 405 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 85/286 (29%), Gaps = 21/286 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A ++ + +LL +ALA+ + A + + + Sbjct: 173 GDLDQAARV--AAKAFEIKPDSLKAHLLLGDVALAKGDHAQAESHYKDAARAEKLYIEPL 230 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216 L + GD T+ ++SP + + Y+ E +A F + +K Sbjct: 231 KRLVEVYTQTGDDAKRLACLTRLDELSPLNFERKAVIGEAYLDLGENDKARAFFEEARKV 290 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASY--HDAIESLKLCDNSIMASIC----AAKSL 270 K + + L+ + ++ A +AIE+ + L Sbjct: 291 VGKVASDMVSDALMEMAKRIGERDQETALRFVTEAIEAKGEA--LGPKDLWMFNNRGILL 348 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKE--- 323 Q R+A K + P + Y H ++ L +++ + Sbjct: 349 RRQGNWREAAENYRKALSIAPS-DAGLRYNLGVAHAEGKDYYTALTHFEEALKLDPDLLL 407 Query: 324 -SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367 ++ + A +K P + LLA + Sbjct: 408 QGPTVGYNIATAYHRCRDLPAAREFLAQTLKRHPGYEPARRLLAHL 453 >gi|124024756|ref|YP_001013872.1| hypothetical protein NATL1_00431 [Prochlorococcus marinus str. NATL1A] gi|123959824|gb|ABM74607.1| Hypothetical protein NATL1_00431 [Prochlorococcus marinus str. NATL1A] Length = 435 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 10/157 (6%) Query: 128 QIAL--AERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 Q + A + + ++ R F+ Y + G A+ KA+++ Sbjct: 51 QAIQFHLKGNIPKATKYYQQLINQECNDYRVFSNYGAILQGL--GKSKEAEASLRKAVEL 108 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +PD + ++ A L + E N N A+ + D G + Sbjct: 109 NPDLAESHSYLGNLLNDLGKFKEAEASLRKAV----ELNPNLALAHAYLGILLNDLGQLK 164 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +++KL S+ A + L +K++AE Sbjct: 165 EAEASLKKAIKLKFGSVKAYDALSNVLNKLGRKKEAE 201 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 6/84 (7%) Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G + ++++L + + L K ++AE L K ++NP+ +A+ Y Sbjct: 93 GKSKEAEASLRKAVELNPDLAESHSYLGNLLNDLGKFKEAEASLRKAVELNPNLALAHAY 152 Query: 300 THLLSEN------TVGKLKRALRL 317 +L + LK+A++L Sbjct: 153 LGILLNDLGQLKEAEASLKKAIKL 176 >gi|118350326|ref|XP_001008444.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89290211|gb|EAR88199.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 550 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 4/175 (2%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 + Y +Y L I A E + LQ A ++L ++ + +A+ Sbjct: 132 DPYEIYNLLGIIYERNNMDEKAEEYYKKCLQTNENYLGAYFNLAQVYYKLNKMQNAKLCL 191 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 KA I P P V + Q ++W +AI + + + + A+ + + Sbjct: 192 EKASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIE--IDPENINALFELGVTQFQI 249 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ D + H+ ++L + + A + S + A+ LE+ K+ PH Sbjct: 250 EELD--EAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQPH 302 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 93/251 (37%), Gaps = 7/251 (2%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 F +E V+ Q+ + A E ++I A++ L +I +L Sbjct: 193 KASIIFPSEPEVFNKLGQLCQEMEDWQQAIGYFEKTIEIDPENINALFELGVTQFQIEEL 252 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A K L I PD +V+ Y A A +L Q K + +A L++ Sbjct: 253 DEAIHNFKKTLMIQPDHFNALFKLVEIYHSADLIEYAQEYLEQAIKIQP--HNVKANLIL 310 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + ++ + + +K+ + A +N +KA I +++ ++N Sbjct: 311 --AGIYLAQKMILEAKQLCEQVIKVDSRNADALYYLGIIYQKENNIQKAISIFKEVTQIN 368 Query: 291 PHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P IA I + + R+ ++ + +L +S + E+G +QA Sbjct: 369 PTKYIAQIQLGQLYHQQGKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELL 428 Query: 348 AMLAMKIAPRK 358 A+ + P Sbjct: 429 CKKALAVDPNA 439 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 14/141 (9%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q+ + + A + +LQ+ FA+ L F +GD N A+ KAL + P+ Sbjct: 379 GQLYHQQGKVEDAIISYKRILQVQPNNYFALNYLSFLLYELGDFNQAELLCKKALAVDPN 438 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-----DKGD 241 A + Y + +AI F K+ + A + N +KG+ Sbjct: 439 AYEPYHNLGLIYQDKLLYEQAIKFYQSALKSNPD---------CAEAYNNLGCIYYEKGN 489 Query: 242 MIASYHDAIESLKLCDNSIMA 262 + + + E++K A Sbjct: 490 LKEAINQFEEAIKANPKFAEA 510 >gi|313148154|ref|ZP_07810347.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12] gi|313136921|gb|EFR54281.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12] Length = 478 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 22/207 (10%) Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A + K +D +P P WV A + K++ +A+ + +E+ A + Sbjct: 188 EKATFFYNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAVESCDFAIAADEEFG--EAHI 243 Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLIS-----QNKKRKAEVI 282 + A SL + + + IA Y A+E L I A + R A Sbjct: 244 IKAHSLFHLENIEGAIAEYQKALEYKTLSPEFTYMFIGLAYAHQENWAEAAESYRLALQA 303 Query: 283 LEKIWKVNPHPEIANIYT-------HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +E+ P +++IY+ HL +L R ++ E+ + E ++ +I Sbjct: 304 IEES-GNGSSPLLSDIYSNKAVCASHLGDSAEAHRLCRLVK--ELAPQDAEPYLLEGRIY 360 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFL 362 +E G+ DQA A+ LA++ AP + ++ Sbjct: 361 MEEGNFDQARAEWALALRYAPEADTWM 387 >gi|219122591|ref|XP_002181625.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406901|gb|EEC46839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 640 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 21/215 (9%) Query: 156 AVYSLYFES--CRIGDLNSAQRYAT--------KALDISPDAPWVTEAVVQQYVLAKEWS 205 +Y + D A A + D + W K W Sbjct: 323 GRRHVYDRAFENASDDFEQAYALAETNEVQLLLEGDDYARVLEWTGMV--------KHWR 374 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 + + + + A++L+ + D + +L L + A + Sbjct: 375 YKLDEASACYEKCADLEPTNALVLVKNAGVKMDGSHQDEAMKLFDTALGLDPKNADALLH 434 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINK 322 A + Q K +A+ LE V P +A + K E++ Sbjct: 435 RANLRLLQTKPDEAKEDLEACIAVRPDHIMARLRLASILAATNEAAKAKKHLDAAEKVEP 494 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +S E ++ G DQA A+ A+ + P Sbjct: 495 KSSEVQSYRGELHFTQGEFDQARAQFEKAIALDPT 529 >gi|67968584|dbj|BAE00651.1| unnamed protein product [Macaca fascicularis] Length = 594 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 22/227 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + K + ++ Sbjct: 229 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI---MKGTEMCPKSED 285 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L+ D + + ++++ S+ I AA+ R + +L K Sbjct: 286 VWLEAARLQPGDTAKAVVA-----QAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKA 337 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA E SVE + ++++ + + A Sbjct: 338 LEHVPNSVRLWKAAVELEEPEDARIMLSRA---VECCPTSVELWLALARL----ETYENA 390 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I++ A++E+A + NT + A+ ++ Sbjct: 391 RKVLNKARENIPTDRHIWITAAKLEEA-NGNTQMVEKIIDRAITSLR 436 >gi|309358159|emb|CAP34526.2| CBR-OGT-1 protein [Caenorhabditis briggsae AF16] Length = 1184 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 55/178 (30%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G ++ A+ KAL++ P + + A + + Sbjct: 436 LANALKERGSVSEAETMYLKALELCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYP 495 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E+ A + +G + + E++++ A +L A Sbjct: 496 EF----AAAHSNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSA 551 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I+ N ++ ++ + ++ ++ Sbjct: 552 IACYNRAIQINPAFADAHSNLASIHKDA--GNMAEAIQSYGTALKLKPDFPDAFCNLA 607 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A M+ + H + L I + + A L+I A Sbjct: 444 GSVSEAETMYLKALELCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 501 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ ISP + + S AI N+ + Sbjct: 502 SNLASILQQQGKLQDAILHYKEAIRISPAFADAYSNMGNTLKEMGDSSSAIACYNRAIQI 561 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G+M + +LKL + A A L Sbjct: 562 NPAF----ADAHSNLASIHKDAGNMAEAIQSYGTALKLKPDFPDAFCNLAHCL 610 >gi|297848776|ref|XP_002892269.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] gi|297338111|gb|EFH68528.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] Length = 809 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + L + +W + + + +G ++++ E+ LC A Sbjct: 293 LLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLG 352 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK 322 +L + R A LE+ + P H ++A+ H + E+ ++ R ++ Sbjct: 353 SALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASS-LHSMGEDERA-IEVFQRAIDLKP 410 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++L + + +++G +A + + P L + + T++ Sbjct: 411 GHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRAL 470 Query: 383 QSALH 387 + AL Sbjct: 471 KEALK 475 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 RA+ L+ +L G+ A+ E++ L + A A SL S + +A Sbjct: 343 THFRALKLLGSAL--FGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIE 400 Query: 282 ILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRA-----LRLEEINKESVESLVIV 331 + ++ + P H + + +Y L G+ +RA L + + Sbjct: 401 VFQRAIDLKPGHVDALYNLGGLYMDL------GRFQRASEMYTRVLAVW-PNHWRAQLNK 453 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + L G ++A A+K+ R Sbjct: 454 AVSLLGAGETEEAKRALKEALKLTNR 479 >gi|291566529|dbj|BAI88801.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 1065 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 94/258 (36%), Gaps = 31/258 (12%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +++ A + + + + ++ +L ++ + A + A+ + D W + Sbjct: 153 RWDEAIKAYKDAIALEPEFFWSHNNLGDALLQLERWDEAAQAYQNAIGLKDDFGWSHYNL 212 Query: 195 VQQYVLAKEWSRAITF-------------LNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + + W AI +++K +A + + I+++ E A + + Sbjct: 213 GEALSKLQRWDEAIKAYKDAIEIKSDLPCIHEKLGDALRYQVPPNLEEISQAYEQAIQAN 272 Query: 242 M--IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + Y+ A+E+ S+ A + SQ + KA + K+ PH N Sbjct: 273 PQDLQIYYRALEAN---PKDAKISLMLADAFRSQGQLDKAVTFYKSTLKIEPH----NAE 325 Query: 300 THLLSENTVGKLKRA-------LRLEEINKESVESLVIVSKIALEMG-SIDQAHAKAMLA 351 H+ + + R + + + + + + +E G + +A A Sbjct: 326 IHIKLGDILLIKGRFTEAVGYLQQAADFQGDDPQLQLGLGVALVEAGTDLHRAEASLRRT 385 Query: 352 MKIAPRKE-IFLLLAQIE 368 +++ P + + L ++E Sbjct: 386 LELQPDQGEAYFYLGKLE 403 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 25/233 (10%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPD 186 Q A + P + L G DL+ A+ + L++ PD Sbjct: 349 QAADFQGD-------------DPQLQL----GLGVALVEAGTDLHRAEASLRRTLELQPD 391 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + L W A+ + + + L +A +LE G + Sbjct: 392 QGEAYFYLGKLEGLRGRWDEALAMYRRSWEINPQVGEWG--LALAEALEKL--GRWSEAV 447 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEIANIYTHLLSE 305 + + S AS+ ++L+ + +A V L + K+ PE+ ++ +L E Sbjct: 448 DQYRQVVLELGESGEASLGLGRALVQLERPVEAVVELRRAVKLGVDRPEVHRLWAGVLVE 507 Query: 306 --NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +++ L E + + ++ + +G +A A+ ++AP Sbjct: 508 LGRWPDVVEQWQWLLERYPGAADIRRRLALALMGLGRWPEAAAQWGEYWRVAP 560 >gi|256072451|ref|XP_002572549.1| heat shock protein 70 [Schistosoma mansoni] gi|238657709|emb|CAZ28781.1| heat shock protein 70 (hsp70)-interacting protein, putative [Schistosoma mansoni] Length = 700 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 94/267 (35%), Gaps = 17/267 (6%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRI----GDLNSAQR 175 + LL + A E+ + + + + V +L +C D+ + Sbjct: 402 ISLLHATYQALAGRSEEAKERFQNIGMVDSGASLVVRVNALIKSACLSMSVDQDVAACLY 461 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR 232 +A ++ P+ P V Q +LA + A+ LN K E+ R L Sbjct: 462 DFQRAQNVWPECPDVYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQRLYTLYRC 521 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +L D + + + +K N + A+ L + ++++ I + + Sbjct: 522 ALTAGDISKVDSRIEEFRRLVKKYPNCLETHSLFAQILSERGDFKESDKIFADLITLA-- 579 Query: 293 PEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P+ Y H ++ L + + + + ++ ++++E G ++A Sbjct: 580 PDSGLAYAHRGLLQLKWKQDRDAALCFFIEGIQKDPKCELIHELLGQLSVEKGQFNEALK 639 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSH 373 +A+K A + L + + + Sbjct: 640 HFDMAIKQAKTQNDLSHLIALREGVNA 666 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 4/132 (3%) Query: 94 SIAAHNIPLARKMHSYVSQQ-HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA 151 ++ A +I + + N + L QI + + + ++ P Sbjct: 522 ALTAGDISKVDSRIEEFRRLVKKYPNCLETHSLFAQILSERGDFKESDKIFADLITLAPD 581 Query: 152 TREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + A L + D ++A + + + P + E + Q V +++ A+ Sbjct: 582 SGLAYAHRGLLQLKWKQ-DRDAALCFFIEGIQKDPKCELIHELLGQLSVEKGQFNEALKH 640 Query: 211 LNQKKKNAKEWN 222 + K AK N Sbjct: 641 FDMAIKQAKTQN 652 >gi|170732852|ref|YP_001764799.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3] gi|169816094|gb|ACA90677.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia MC0-3] Length = 275 Score = 46.5 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 47/163 (28%), Gaps = 14/163 (8%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL A QY+ +L P L + GD A + + Sbjct: 90 PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLEQ 148 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++P + + + + A L + E + +L L Sbjct: 149 ATALAPTDAATLSDLAYSKMREGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLAT 204 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 G + ++ KL A +S I ++ + A + Sbjct: 205 GHAKDARRL-MDQQKLSP--------AVRSQIRDDETKVAAAM 238 >gi|326317963|ref|YP_004235635.1| HemY domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374799|gb|ADX47068.1| HemY domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 425 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 50/413 (12%), Positives = 115/413 (27%), Gaps = 38/413 (9%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + + + + V++ W S +L + + Sbjct: 1 MRAALWFLVLFGTAVAAALFAGNNQGTVTLFWPPYRVDLSLNFVLLLFFGGFAILYAALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 L P ++ + AL L + A +RK Q Sbjct: 61 ALSALLELPGQARRWRVQQKERSMHAALLDALSQLLAGRFLRSRKAAMAALAQENALEAA 120 Query: 121 ------------LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVY-SLYFE 163 L +L+ + + A + L L R E + Sbjct: 121 GEAVPHGRQLRTLAHLVAAESSHALQDRATREAHLRNALDNIPARAPVSELELREGAQLR 180 Query: 164 SCR----IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + R D +A + + A ++ L+ + A+ K+ Sbjct: 181 AARWSLDERDAATALEHLAALPQGAARRTLALRARLKATRLSHQTQEALETARLLGKHRA 240 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRK 278 ++ ++E + A + + + ++ +I AA+ L + Sbjct: 241 FSPAAAQSIVRGLAIELLNGAHDPAQLQQTWMAFEPAERAMPELAIHAAQRLTALGGDHG 300 Query: 279 AEVI-LEKIWK-----VNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVES 327 L W+ +P P+ + + E+ + L R ++ N Sbjct: 301 QVRTWLLPAWERMVDAADPLPDAHALKLVRVLESNLDALDAAWLARIESAQQANPRDARL 360 Query: 328 LVIVSKIALEMGSIDQAHA---KAMLAMKIAP-RKEIFLLLAQIEQANSHNTD 376 + L +A +A + P R + LA++ + +T+ Sbjct: 361 QYLSGMACLRRQLWGKAQQLFTQAAQQLDEGPLRCRAWRHLAELAE-QRGDTE 412 >gi|254786362|ref|YP_003073791.1| hypothetical protein TERTU_2356 [Teredinibacter turnerae T7901] gi|237685879|gb|ACR13143.1| TPR domain/sulfotransferase domain protein [Teredinibacter turnerae T7901] Length = 526 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 24/221 (10%), Positives = 66/221 (29%), Gaps = 43/221 (19%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + GDL + Y L +P + + +A+ +++ + Sbjct: 13 IAALNRGDLRAVHNYCESILGANPAHADAWFLLAMVAANTGKLQQALELIDKALSITPQV 72 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRK 278 A L ++ A+ A +++ L ++ I+ + Sbjct: 73 ----ADYLAQKAKLLTMLRHDKAARTCADKAVALNPQ---GALLLDTLGVVYINLGDYAR 125 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A +L K + E ++ ++ + Sbjct: 126 ARELLNKA-------------------------------VALKPEHLQFRFNLATAEQFL 154 Query: 339 GSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 G++ A A + A++I P + L+++ + + + ++ Sbjct: 155 GNLIVAKAHYLKAIEIKPNYARAYWALSELNK-ENLDGSRV 194 >gi|148360062|ref|YP_001251269.1| methyltransferase [Legionella pneumophila str. Corby] gi|296108117|ref|YP_003619818.1| hypothetical protein lpa_03621 [Legionella pneumophila 2300/99 Alcoy] gi|148281835|gb|ABQ55923.1| methyltransferase [Legionella pneumophila str. Corby] gi|295650019|gb|ADG25866.1| Hypothetical protein lpa_03621 [Legionella pneumophila 2300/99 Alcoy] Length = 577 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%) Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180 L Q E A E + Q P T L + ++GD+ +A Y +A Sbjct: 8 LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 I+P+ + + Y A + AI + Q + E+ + L +L N Sbjct: 66 RKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + H + ++ + A L+ + A+ + +NP H E A Y Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHRE-AQFY 180 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 HL + ++ E + E V+SL+ + IAL+ A A+ + Sbjct: 181 LGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239 >gi|52842693|ref|YP_096492.1| TPR domain-containing protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629804|gb|AAU28545.1| TPR domain protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 571 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%) Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180 L Q E A E + Q P T L + ++GD+ +A Y +A Sbjct: 8 LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 I+P+ + + Y A + AI + Q + E+ + L +L N Sbjct: 66 RKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + H + ++ + A L+ + A+ + +NP H E A Y Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPQHRE-AQFY 180 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 HL + ++ E + E V+SL+ + IAL+ A A+ + Sbjct: 181 LGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239 >gi|109899147|ref|YP_662402.1| tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c] gi|109701428|gb|ABG41348.1| Tetratricopeptide TPR_2 [Pseudoalteromonas atlantica T6c] Length = 940 Score = 46.5 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 81/259 (31%), Gaps = 37/259 (14%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + Q H H L LL +I ++++A E+ + +L + A Sbjct: 531 GDADEAFRLLRLILQDHRLHVPSL--LLSAKINYEREEFDLAVERYKTVLSVSIRNVKAH 588 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + + + A K L + PD VQ + + E S A L++ Sbjct: 589 EGLLLVALKKHNSKDALYQVDKLLALDPDNIKYIVQKVQLHQIRDETSNATKMLDK---- 644 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 RN L A + ++G+ + ++ L + + Sbjct: 645 LAFLGRNNPQALFALAKLYVNQGENQKALAALTQAQTLAPD----------------NAQ 688 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 A ++E L + + R L E + + A + Sbjct: 689 LALQVIE---------------LMLNNHLSKEAKPRIDELAERFPSLANVPFMRGRAAEQ 733 Query: 338 MGSIDQAHAKAMLAMKIAP 356 I A A+K+ P Sbjct: 734 EQDIATAQRMYEYALKLDP 752 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 19/207 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R L A A +AL + P + + L + A L ++ +R Sbjct: 495 RQNHLEQALSTAQRALKLQPSMVAAQYNLANIWHLQGDADEAFRLLRLILQD----HRLH 550 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEV 281 L+ + N ++ + + L + ++ A + A K S++ + + Sbjct: 551 VPSLLLSAKINYEREEFDLAVERYKTVLSVSIRNVKAHEGLLLVALKKHNSKDALYQVDK 610 Query: 282 ILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +L P+ + + H + + T K +L + + + ++L ++K+ + Sbjct: 611 LLALD------PDNIKYIVQKVQLHQIRDETSNATKMLDKLAFLGRNNPQALFALAKLYV 664 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLL 363 G +A A A +AP L Sbjct: 665 NQGENQKALAALTQAQTLAPDNAQLAL 691 >gi|330921312|ref|XP_003299369.1| hypothetical protein PTT_10345 [Pyrenophora teres f. teres 0-1] gi|311326952|gb|EFQ92505.1| hypothetical protein PTT_10345 [Pyrenophora teres f. teres 0-1] Length = 266 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 74/268 (27%), Gaps = 41/268 (15%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPA---TREFAVYSLYFESCRIGDLNS 172 + + L++ + LA A + + + P T +IG Sbjct: 28 DTPVSQLIKDASVQLATGNTQDALAYFDIAISRDPRNYLTYF--RRG--AAYLQIGRTTQ 83 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ K L++ P + +W A K + A Sbjct: 84 AQHDFDKVLELKPGFEGALVQRAKIRARKADWEAARKDYEAAGKTDEIAQLEEAQGAAMM 143 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + E ADKGD + +A + + A I + + R Sbjct: 144 AQEAADKGDWDSCISNAGTA---------IVVAGAAYDIRKTRAR--------------- 179 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLA 351 V + L +IN + + + +G ++ Sbjct: 180 -------CRFEKGEVVEGISDLQHLLQINTGDITPHLQSSAMAFYSLGETEKGIKHIAQC 232 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++ P ++ + L + E+ + K+ Sbjct: 233 LQSDPDSKVCMKLRRREKNLEKDIQKVR 260 >gi|262198282|ref|YP_003269491.1| hypotheticalprotein [Haliangium ochraceum DSM 14365] gi|262081629|gb|ACY17598.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365] Length = 288 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 70/198 (35%), Gaps = 13/198 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G ++A +A+ +P ++ Y +++ +A+ + + + Sbjct: 46 KQQGKSDAAISAFQQAVAANPKHAMAWASLGHLYKDKRDYKKAVDAYERATAISDD---- 101 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+L + + + S +L S + + KA L Sbjct: 102 NALLWSNLGMAYYRAKRVDDAQRALERSFQLDSKSADVNANLGTLYRQRGDIEKALRHLR 161 Query: 285 KIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 K++P H +A Y + +L++A+RL+ +L +V + Sbjct: 162 FAVKLDPKSAVYHSNLAIAYRSNKQYDEAEQELRQAIRLDAKEPSYQFNLGVVYR---YQ 218 Query: 339 GSIDQAHAKAMLAMKIAP 356 +D+A A A+++ P Sbjct: 219 EKVDEAIAAYTRAVRLDP 236 >gi|192359864|ref|YP_001981168.1| TPR domain-containing protein [Cellvibrio japonicus Ueda107] gi|190686029|gb|ACE83707.1| TPR domain protein [Cellvibrio japonicus Ueda107] Length = 608 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 106/312 (33%), Gaps = 48/312 (15%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRI 167 F +E L LL + A R Y++A + P E A + + Sbjct: 74 RNDRAFDSETLYSLLAAEFAGNRRLYDLALSNYAQQARQTRDPQIAERAT----LLARYL 129 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----- 222 GD ++A A +D +PD + A + +A + + + + Sbjct: 130 GDKDTALEAAQIWMDAAPDNREALSNQALAQLEAGQLHQAFASSQRLLEQGETPHFQVIA 189 Query: 223 -------------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 +N LL+ L +GD + A +LKL Sbjct: 190 AQANTLSKAEHDQLLAEFQSLLKTHKNNEQLLVGTGLLLEQQGDYPQAMTLARRALKLAP 249 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKL-KR 313 S+ +I A L + ++A +E + HP+ + Y +LS N + ++ Sbjct: 250 RSLPPAILEANLLHLLKRDQEAIAKMED--LLALHPDNHRLRYQYARILSHNDLAAAQQQ 307 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQA 370 L + + + + + +AL+ + A +++ + L Q+ +A Sbjct: 308 FALLTQQLPHNGDIWLSLGIVALQREDQETAERAFEALVELGQHKNTANFY--LGQMSEA 365 Query: 371 NSHNTDKILYWT 382 + + +LY+ Sbjct: 366 AGNPDEALLYYL 377 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 98/294 (33%), Gaps = 24/294 (8%) Query: 85 YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-QYNIAHEK 142 +AL L + A + A + + ++ Q + +++ + Sbjct: 150 REALSNQALAQLEAGQLHQA---FASSQRLLEQGETPHFQVIAAQANTLSKAEHDQLLAE 206 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ---QYV 199 + +L+ E + + GD A A +AL ++P + + A+++ ++ Sbjct: 207 FQSLLKTHKNNEQLLVGTGLLLEQQGDYPQAMTLARRALKLAPRS--LPPAILEANLLHL 264 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 L ++ AI + + +R R + D+ A+ + ++ Sbjct: 265 LKRD-QEAIAKMEDLLALHPDNHRLR-----YQYARILSHNDLAAAQQQFALLTQQLPHN 318 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + + + + AE E + ++ H AN Y +SE + L + Sbjct: 319 GDIWLSLGIVALQREDQETAERAFEALVELGQHKNTANFYLGQMSEAAGNPDEALLYYLQ 378 Query: 320 INKESVESLVIVSKIAL-----EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 +N S + ++ L + G D AH P L + + E Sbjct: 379 VNGG---SDFLAAQARLLDIFMQRGEYDAAHQHINRQSLRQPEHAAILFMLEAE 429 >gi|116179800|ref|XP_001219749.1| hypothetical protein CHGG_00528 [Chaetomium globosum CBS 148.51] gi|88184825|gb|EAQ92293.1| hypothetical protein CHGG_00528 [Chaetomium globosum CBS 148.51] Length = 895 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 84/272 (30%), Gaps = 44/272 (16%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 LN A+R +A +PD + A V+ +A L ++NA Sbjct: 577 EKALNEARRVLARAFKQNPDNEDIWLAAVKLEADNGFIDQARDLLKTARQNAPTDRVWMR 636 Query: 227 ILLIARSLENADKG-------------------------DMIASYHDAIES----LKLCD 257 + R L + D + A E+ ++ Sbjct: 637 SVAFERQLGANEAALDLVQDALQLFPAAPKLWMMKGQIYDDLEKLPQAREAYSTGVRAVP 696 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALR 316 +S+ + ++ KA +L++ + P PE+ + E G +A Sbjct: 697 SSVPLWLLYSRLEERSGNVVKARSVLDRARQAVPKSPELWTELIRV--ERRAGNANQAKS 754 Query: 317 L-EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ-IEQANSHN 374 L ++ +S ++ ++ L + + Q A+K + + A I A Sbjct: 755 LMASALQQMPKSGLLWAERILHLEARTQRKTLITEAIKKVEDDPVLQVTAARILWAERK- 813 Query: 375 TDKILYWTQSALHAMPDPLWISDDGYLSSVWL 406 D+ W + AL ++ W Sbjct: 814 LDRAQNWFERALLLDR---------HIGDTWA 836 >gi|257062034|ref|YP_003139922.1| hypothetical protein Cyan8802_4301 [Cyanothece sp. PCC 8802] gi|256592200|gb|ACV03087.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 363 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 84/265 (31%), Gaps = 11/265 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + N A K + +N Y L +A N A + P Sbjct: 83 GYLYAQKGNFRQAVKAYQQAVTLD-PNNADFYYALGFSLANIGDNENAASAYYYAIQLAP 141 Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T+ L R D A + + + P+ + + KE +AI Sbjct: 142 RVTK--NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQ 199 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +LN K R +L A ++ + +++ + ++ + + + Sbjct: 200 YLNNAVKRFPNDLELRLLLATA----FLEQDNNELAFNQLKSAERISPGNPKVQLKIGRI 255 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVE 326 L QNK A ++I ++P A L +++ +G + L + E+ E Sbjct: 256 LEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLATKDYLGAVITYRELASMLPETPE 315 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 + E G +A A Sbjct: 316 PYYYLGLAYKERGRKKEATKALEQA 340 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 42/258 (16%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE--MMLQIPATREFAVYS 159 A+ + Q + +E L LL + + + YN A E +L + F+ Sbjct: 24 AQLQPPLILAQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKAAILDGNNAKIFSGIG 83 Query: 160 -LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 LY + G+ A + +A+ + P+ A+ + A + + A Sbjct: 84 YLYAQK---GNFRQAVKAYQQAVTLDPNNADFYYALGFSLANIGDNENAASAYYYAIQLA 140 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + I + + D + + L N+ A SLI Q + K Sbjct: 141 PRVTK----NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDK 196 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A L +KR +E ++++ LE Sbjct: 197 AIQYLNNA------------------------VKRF-------PNDLELRLLLATAFLEQ 225 Query: 339 GSIDQAHAKAMLAMKIAP 356 + + A + A +I+P Sbjct: 226 DNNELAFNQLKSAERISP 243 >gi|189200909|ref|XP_001936791.1| DNAJ domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983890|gb|EDU49378.1| DNAJ domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 518 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 76/268 (28%), Gaps = 41/268 (15%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPA---TREFAVYSLYFESCRIGDLNS 172 + + L++ + LA A + + + P T +IG Sbjct: 28 DTPVSQLIKDASVQLATGNTQDALTYFDIAISRDPRNYLTYF--RRG--AAYLQIGRTTQ 83 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ K L++ P + +W A K + A Sbjct: 84 AQHDFDKVLELKPGFEGALVQRAKIRARKADWEAARKDYEAAGKPDEIAQLEEAQGATMV 143 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + E ADKGD + +A ++ + + A+ + + Sbjct: 144 AQEAADKGDWDSCITNAGAAIVVAGAAYDIRKIRARCRFEKGEV---------------- 187 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLA 351 +S+ L +IN + + + +G ++ Sbjct: 188 -------VEGISD--------LQHLLQINTGDITPHLQSSAMAFYSLGETEKGIKHIAQC 232 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++ P ++ + L + E+ + K+ Sbjct: 233 LQSDPDSKVCMKLRRREKNLEKDIQKVR 260 >gi|114890|sp|P19450|BCSC1_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|141734|gb|AAA21886.1| bcs C protein [Gluconacetobacter xylinus] Length = 1319 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 86/289 (29%), Gaps = 26/289 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 I A + + + + + L+ L ++ +A+ A + L + + Sbjct: 418 TGQIAAAEQEYRGILSREPNNQLALMGL--ARVDMAQGNTAEARQLLSR-VGPQYASQVG 474 Query: 157 ---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 V L + + D +A+ +P PWV + + + A + Sbjct: 475 EIEVSGLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQP 534 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS-ICAAKSLI 271 N +A +L N + + L + A A + I Sbjct: 535 ILANPVTAQDRQAGILYTYGSGNDAMTRQLLA--------GLSPADYSPAIRSIAEEMEI 586 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 Q+ + ++ NP P I T + T + L + V + + + Sbjct: 587 KQDLASRLSMV------SNPVPLIREALT--QPDPTGARGVAVADLFRQRGDMVHARMAL 638 Query: 332 SKIALEMGSI--DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + DQ + A MKI+ LLA + T Sbjct: 639 RIASTRTIDLSPDQRLSYATEYMKISNPVAAARLLAPLGDGTGSATGSA 687 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 16/163 (9%) Query: 133 ERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A + + LQI L S R GD A+RY +A+ P Sbjct: 304 AGRLAAAEQSFQSALQINSHDADSLGGMGLV--SMRQGDTAEARRYFEEAMAADPKTADR 361 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL------IARSLENADKGDMIA 244 + ++ E++ + + E + A L +L AD Sbjct: 362 WRPALAGMAVSGEYASVRQLIAAHQYT--EAKQQLATLARQPGQYTGATLMLADLQRSTG 419 Query: 245 SYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283 A + + + + A A+ ++Q +A +L Sbjct: 420 QIAAAEQEYRGILSREPNNQLALMGLARVDMAQGNTAEARQLL 462 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 110/351 (31%), Gaps = 57/351 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GLM+ A+ ARK+ + V + + A ++ +L P Sbjct: 480 GLMAAASQTSDSARKVSILREAMAQAPRDPWVRINLANALQQQGDVAEAGRVMQPILANP 539 Query: 151 AT---REFAV---YSLYFESCRIG--------DLNSA-QRYATK-------ALDIS---- 184 T R+ + Y ++ D + A + A + A +S Sbjct: 540 VTAQDRQAGILYTYGSGNDAMTRQLLAGLSPADYSPAIRSIAEEMEIKQDLASRLSMVSN 599 Query: 185 --PDAPWV----------TEAVVQQYVLAKEWSRAITFL------------NQKKKNAKE 220 P AV + + A L +Q+ A E Sbjct: 600 PVPLIREALTQPDPTGARGVAVADLFRQRGDMVHARMALRIASTRTIDLSPDQRLSYATE 659 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAI-ESLKLCDNSIM-ASICAAKSLISQNKKRK 278 + + + AR L G A+ + E ++ M S+ + L + + + Sbjct: 660 YMKISNPVAAARLLAPLGDGTGSATGSALLPEQVQTLQQLRMGISVAQSDLLNQRGDQAQ 719 Query: 279 AEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A L + +P P++A + L+ L + N + +++ + A Sbjct: 720 AYDHLAPALQADPEATSPKLALARLYNGHGKPGKALEIDLAVLRHNPQDLDARQAAVQAA 779 Query: 336 LEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + A AM ++ +P +L +A +QA+ H I + A Sbjct: 780 VNSDHNSLATRLAMDGVQESPMDARAWLAMAVADQADGHGQRTIED-LRRA 829 >gi|149928273|ref|ZP_01916516.1| hypothetical protein LMED105_15344 [Limnobacter sp. MED105] gi|149823002|gb|EDM82244.1| hypothetical protein LMED105_15344 [Limnobacter sp. MED105] Length = 406 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 12/184 (6%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + + RE A Y L + R G L+ A++ A +L S Sbjct: 84 GEIDRAIRVHQFLTTREQITLADREKATYELGVDFLRAGILDRAEQ-AFHSLSGSDMKAE 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + +++ Y L K W +AI ++ ++ E A + + D GD++ + + Sbjct: 143 ASRQLLELYELEKAWDKAIAQAHKLREYGAEVPAGDIAHFYCELAAQFIDAGDLLKAKAE 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHL 302 +L ++ AS+ +QN+ +A + NP P + + L Sbjct: 203 LQNALLTDAQNVRASLLLGDIYFTQNQFEEAIGQWRAAERQNPWYLPLVGPNMWAAFKKL 262 Query: 303 LSEN 306 E Sbjct: 263 EREE 266 >gi|297569136|ref|YP_003690480.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2] gi|296925051|gb|ADH85861.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio alkaliphilus AHT2] Length = 592 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 98/275 (35%), Gaps = 21/275 (7%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L+ I + + A E LE ++ Y L +G + A +AL Sbjct: 164 AMLMLAVIYGSSDRRQEAREILEQLVADQPAYFLGHYYLARLYHDLGLIEQALGAYERAL 223 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +++ AP E + Y A + ++ L + R R++L ++ + Sbjct: 224 ELNWSAPLAQE-LAAIYEAAGLYEDSLALLRRMVAKNPADERARSLLADLYLR--LERVE 280 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IA 296 + A+ + + + A+ L+ + + +A V+L+ + P + + Sbjct: 281 EALAELTALRPYSRDVDRV--DLTMARILLDEQRYEEAVVLLQGLLADEPRLDAVRSLLV 338 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAHAKAMLAM- 352 Y L + L LEEI E+++++++I G A A A+ Sbjct: 339 LAYYRLGKIDLARNL-----LEEIRPGDYGYEEAVLMLARIYHGSGQPVAAEAVLERALA 393 Query: 353 -KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 ++ LA + H+ + L Q AL Sbjct: 394 DSQHRYLSFYVTLA-LLHIEWHDAGQGLAIFQRAL 427 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 15/257 (5%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A +Y+ A + L + L + + A + + + I P Sbjct: 69 SAELGGRYDEARYAYQQALLCDRKAVHVMRRLAMLLLQQQEREQAIYWVRRIIAIDPTDL 128 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + Y + RA + + N + +I S + + I Sbjct: 129 AARSLLAKLYTALDDPDRAAAVYQEILTLDPGNANAMLMLAVIYGSSDRRQEAREILEQL 188 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIY-THL 302 A + + A+ +A E LE W E+A IY Sbjct: 189 VADQ-----PAYFLGHYYLARLYHDLGLIEQALGAYERALELNWSAPLAQELAAIYEAAG 243 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA-MKIAPRKEIF 361 L E+++ L+R + N + +++ + L + +++A A+ + Sbjct: 244 LYEDSLALLRR---MVAKNPADERARSLLADLYLRLERVEEALAELTALRPYSRDVDRVD 300 Query: 362 LLLAQIEQANSHNTDKI 378 L +A+I + + Sbjct: 301 LTMARILLDEQRYEEAV 317 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 9/238 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKA 180 V L +I L E++Y A L+ +L R AV SL + R+G ++ A+ + Sbjct: 299 VDLTMARILLDEQRYEEAVVLLQGLLADEP-RLDAVRSLLVLAYYRLGKIDLARNLLEEI 357 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + Y + + A L + +++ + + L +E D G Sbjct: 358 RPGDYGYEEAVLMLARIYHGSGQPVAAEAVLERALADSQHRYLSFYVTLALLHIEWHDAG 417 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 +A + A++ L A L A ++++ ++PH A Y Sbjct: 418 QGLAIFQRALQDLGPEPEVY---FEYAVYLDRVGDSEGALAKMQEVIALDPHDPYALNYV 474 Query: 301 HLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + L+ A + + + + +G +A + LA+++ Sbjct: 475 GYTWADRGENLELAREYIEEAVRLKPDDGAIRDSLGWVYYRLGKYQRAMEELELAVQL 532 Score = 37.2 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 83/253 (32%), Gaps = 20/253 (7%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L LL Q + A + ++ I T A L + D + A + Sbjct: 100 LAMLLLQQQ-----EREQAIYWVRRIIAIDPTDLAARSLLAKLYTALDDPDRAAAVYQEI 154 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L + P + Y + A L Q + + + + D G Sbjct: 155 LTLDPGNANAMLMLAVIYGSSDRRQEAREILEQLVADQPAYF----LGHYYLARLYHDLG 210 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----I 295 + + +L+L ++ +A AA + + +L ++ NP E + Sbjct: 211 LIEQALGAYERALELNWSAPLAQELAA-IYEAAGLYEDSLALLRRMVAKNPADERARSLL 269 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 A++Y L E L L +++ + +++I L+ ++A + Sbjct: 270 ADLYLRL--ERVEEALAELTALRPYSRDVDRVDLTMARILLDEQRYEEAVVLLQGLLADE 327 Query: 356 PR---KEIFLLLA 365 PR L+LA Sbjct: 328 PRLDAVRSLLVLA 340 >gi|262198610|ref|YP_003269819.1| hypotheticalprotein [Haliangium ochraceum DSM 14365] gi|262081957|gb|ACY17926.1| TPR repeat-containing protein [Haliangium ochraceum DSM 14365] Length = 2316 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 12/206 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + R GDL+ A+ +A +S V A+V + +++A + + Sbjct: 1716 RQHEREGDLDGAETLYREAATMSQGDLPVLVALVDFHCATHHFTQAAAAIEDFLRTEPPL 1775 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + ++ ++ D A+ ++L + A A+ L N+ +A+ Sbjct: 1776 EQRLEAMMRQAEIQADCLLDPEAAIATLRAVVELSPDYQDAQYRLAQELFLLNRPVEAKA 1835 Query: 282 ILEKIWKVNPH------PEIANIYTHLLS------ENTVGKLKRALRLEEINKESVESLV 329 +++ ++ PEI + Y + L + + + R E + ++ Sbjct: 1836 AIDRAIELAASPGKPVLPEILSRYYYYLGRILEVLGESRRVVSQYRRAAEYDPAYAPPVL 1895 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIA 355 +++ A+E QA + A A Sbjct: 1896 ALARRAVEQSDQRQAETLLINAAHAA 1921 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 1/122 (0%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNR 223 R+GD++ A +A++ D A+V + WS Q+ + + Sbjct: 1061 RRLGDVDGAVAQYQRAIEYGGDIGRSQRALVHLLAEHERWSELEAAYVQELELLGGDEQT 1120 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +IL+ +L G + E+L+L +I A A S +R +L Sbjct: 1121 RASILMRLAALRRDQLGQASEAAQAYEEALELDPPNIPAMEALAALYESDGSERDLLRVL 1180 Query: 284 EK 285 Sbjct: 1181 SA 1182 >gi|262305021|gb|ACY45103.1| acetylglucosaminyl-transferase [Peripatus sp. 'Pep'] Length = 288 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + + H + L L I + A L++ A Sbjct: 34 GXVAEAEECYNTALRLCSTHADSLNNL--ANIKREQGLTEEATRLYLKALEVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ ISP + ++ A+ + + Sbjct: 92 SNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMQDIPGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAFCNLANALKEKGXVAEAEECYNTALR----LCSTHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGLTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMQDIPGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ +T ++ +L G A R KAL++ P+ Sbjct: 27 ANALKEKGXVAEAEECYNTALRLCSTHADSLNNLANIKREQGLTEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + + A + D+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMQDIPGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYETRMKKLVAIVADQLEKNRLPSVHPHH 236 >gi|256829994|ref|YP_003158722.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum DSM 4028] gi|256579170|gb|ACU90306.1| PEP-CTERM system TPR-repeat lipoprotein [Desulfomicrobium baculatum DSM 4028] Length = 884 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 14/233 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + ARKM + Q + L L Q+ E+ + + I + FA Sbjct: 175 GDRAEARKMLDKLLAQDPENRSGLHAL--AQLEAQEKDPEAMLDAYSRISSIYPSDLFAR 232 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y G+ + A L PD+ + ++ A T+L++ + Sbjct: 233 YKQGSLLMNKGEGEKVRVSAEAMLSEYPDSAEGHRLMGLYLFREGKFDEAATYLSKSLRI 292 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + L+ +L+N + + L + A I + + Q + Sbjct: 293 KPDLETYYLLGLVYYNLDNLE-----LAVTQFQTVLDYSPGFVQARIMQGEIFLRQGRGP 347 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 +A V EK+ + +P H + L+ L + + Sbjct: 348 EAMVAAEKLIEGSPEDFRGH--VLKGDALLMQGKAHEALAEFKQGIGLAPSHY 398 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 82/235 (34%), Gaps = 14/235 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + +A + A E ++Q+ + + L + A++ K ++ P Sbjct: 639 RAWMAAGDLDKAEESARRLMQLKPDKGQSCLPLASILEMRQNRAEAEKVLLKGWELEPSD 698 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V + + + +E +A+ +Q ++ A L + + G + Sbjct: 699 DQVGVVLGEFQLRGRETKKALATFDQVLAHSPT----NAPALTGKGMALQLLGRNDDAAR 754 Query: 248 DAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIW-KVNPHPEIANI--YTHLL 303 +++++ + + A A + K +A + + N P + + Y + Sbjct: 755 MYLQAVQARHDHVPALNNLAMIWADDEAKSAQAVNLAMAAFVLANSDPAVIDTLGYALIR 814 Query: 304 ---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 E +G L RAL L N + +++ L G +A A A+ A Sbjct: 815 NNRPEEALGVLARALTLAPGNPGILY-HQGLAQAEL--GRTAEARATLETALASA 866 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 89/274 (32%), Gaps = 37/274 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL I + A + V + V +IA + + +A + LQ Sbjct: 66 GLAYIETGKMDQAEREFQKV--LLQNPYDGRVNFQLGRIANFQNKPAVAVPLIMAYLQEH 123 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ L + GD SA+ + KAL + PD +VQ +++ + + A Sbjct: 124 PDDAAALEQLAISATISGDPASAKGHLEKALAVEPDRISAKLGLVQIFMIQGDRAEARKM 183 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L++ E NR+ L LE +K D A + + + A L Sbjct: 184 LDKLLAQDPE---NRSGLHALAQLEAQEK-DPEAMLDAYSRISSIYPSDLFARYKQGSLL 239 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +++ + K + A + +S E + Sbjct: 240 MNKGEGEK-VRV------------------------------SAEAMLSEYPDSAEGHRL 268 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + G D+A +++I P E + LL Sbjct: 269 MGLYLFREGKFDEAATYLSKSLRIKPDLETYYLL 302 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 98/290 (33%), Gaps = 23/290 (7%) Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 V L A+ E + + A +LE T + S + + R G + A + Sbjct: 533 VRALIASAAVLEKQGKLDEARVRLEKARSTKDTGAILMLSSFLQ--RNGKSDEALAVLDQ 590 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIARSLEN 236 P+ + + + + +V KE +A+ L Q A R RA + Sbjct: 591 ERTKQPENMVIVQGMAKLHVARKEMDKAMALYSRLEQIDPYAGTVERMRAWMAA------ 644 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 GD+ + A ++L + + + A L + + +AE +L K W++ P + Sbjct: 645 ---GDLDKAEESARRLMQLKPDKGQSCLPLASILEMRQNRAEAEKVLLKGWELEPSDDQV 701 Query: 297 NIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM--GSIDQAHAKAMLA 351 + L T L ++ + + + +AL++ + D A Sbjct: 702 GVVLGEFQLRGRETKKALATFDQVLAHSPTNA-PALTGKGMALQLLGRNDDAARMYLQAV 760 Query: 352 MKIAPRKEIFLLLAQI-EQANSHNTDKILYWTQSALHAMPDPLWISDDGY 400 LA I + + + + + A DP I GY Sbjct: 761 QARHDHVPALNNLAMIWADDEAKSAQAVNLAMAAFVLANSDPAVIDTLGY 810 >gi|195469982|ref|XP_002099914.1| GE16759 [Drosophila yakuba] gi|194187438|gb|EDX01022.1| GE16759 [Drosophila yakuba] Length = 610 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 82/275 (29%), Gaps = 25/275 (9%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATR------EFAVYSLYFESCRIGDLNSAQ 174 L ++ + + ++ A + + R LY+ G+ A+ Sbjct: 204 LSTWIKALAQMFDCKHLDAARTFQRLQDTTMLRCNEYLMMAMGRCLYYH----GNYIQAE 259 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + A+ +PD + + S + L + + +++ + + + Sbjct: 260 QLFASAISANPDNVEAIAMLAVVRSQEGVDGSMDMDRLYAQVTSEVKYSASHWFVH---A 316 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 D G + L L A I + LIS + ++A V P+ Sbjct: 317 QLMYDSGKFERGLSFVGQCLNLEPRHHEALILRGRLLISLERHKEAAEAFRTAQTVIPYR 376 Query: 294 EIANIYTHL-LSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGS---IDQAH 345 +Y L S + K A + K S SL + + A Sbjct: 377 --FEVYRGLFHSYLAQKRFKEAHTMCNWTLHIFKNSPRSLTMFGRTLFHSPDPKIRKTAR 434 Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKIL 379 A ++KI P L+A I Q I Sbjct: 435 KFAEKSLKIDPNYTPAVALMADICQVEGAPKASIK 469 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 10/148 (6%) Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L R + A A + P V + Y+ K + A T N Sbjct: 348 LRGRLLISLERHKEAAEA---FRTAQTVIPYRFEVYRGLFHSYLAQKRFKEAHTMCNWTL 404 Query: 216 KNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 N R++ + R+L + D + A +SLK+ N A A + Sbjct: 405 H--IFKNSPRSLTMFGRTLFHSPDPKIRKTARKFAEKSLKIDPNYTPAVALMADICQVEG 462 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + +LE + P AN++THL Sbjct: 463 APKASIKLLEDHVSLFPQ---ANLFTHL 487 >gi|187925716|ref|YP_001897358.1| hypothetical protein Bphyt_3746 [Burkholderia phytofirmans PsJN] gi|187716910|gb|ACD18134.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN] Length = 602 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 70/224 (31%), Gaps = 13/224 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL++ A ++ A M Y + + A+ + A E+ + L Sbjct: 94 RGLVAAALGHLDEA--MICYDQALQLQPDFADAHNNFGVALQAQGDLSEAIEQYRLALAS 151 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A +L ++G + A +AL + P + V + + AI Sbjct: 152 NPMLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNAHKARGDHGAAIA 211 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + A + + + GD + ++ L N +C S Sbjct: 212 SFERALSLRANYT--EAHINLGSLIGKL--GDYAGAEAHYRRAVALKPN-PTHLVCLGGS 266 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 L +Q + + E + ++PH Y LKR Sbjct: 267 LGAQGRLDEEEGFYRQALALDPH------YADAHQNLAWLLLKR 304 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 15/201 (7%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E+ + G L++A+ + L + P + A + +++ K Sbjct: 28 LEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHDTAASLMSRALK----L 83 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R+ A R L A G + + ++L+L + A +L +Q +A Sbjct: 84 DRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVALQAQGDLSEAIE 143 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVESLVIVSKI 334 NP + L + KL L ++ S E+ V Sbjct: 144 QYRLALASNP----MLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNA 199 Query: 335 ALEMGSIDQAHAKAMLAMKIA 355 G A A A+ + Sbjct: 200 HKARGDHGAAIASFERALSLR 220 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 56/193 (29%), Gaps = 11/193 (5%) Query: 124 LLEVQ-----IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 LL+ + ++ A L + T A +++ GD +A Sbjct: 155 LLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNAHKARGDHGAAIASFE 214 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 +AL + + + +++ A + + + D Sbjct: 215 RALSLRANYTEAHINLGSLIGKLGDYAGAEAHYRRAVALKPNPTHLVCLGGSLGAQGRLD 274 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN- 297 + + ++L L + A A L+ + R+ W+ + + IA Sbjct: 275 EEEGF-----YRQALALDPHYADAHQNLAWLLLKRGDYRQGWAEFALRWRKSDYDAIAVP 329 Query: 298 IYTHLLSENTVGK 310 E+ G+ Sbjct: 330 GVAEWRGESLEGR 342 >gi|326386122|ref|ZP_08207746.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326209347|gb|EGD60140.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 657 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 40/292 (13%), Positives = 87/292 (29%), Gaps = 41/292 (14%) Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + + + A +E + + P F E R G A Y KA P P + Sbjct: 13 QGRLDEAARLVEGAIARNPEDPAFLALGGAIEFHR-GAHQRAVSYLKKAQVFRPQDPVIR 71 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE---------------- 235 +V+ + + A +++ R A L + E Sbjct: 72 ANLVEALLQMGDLHGAHALCDRESALGDPSLRL-ARLGAYLAQEVGEFATAVELYRHVTS 130 Query: 236 ---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 D G + +++++ ++ I ++L+ + +A Sbjct: 131 KVPADWASWNNLGNALTDMGKPGEAVAALEQAVRVAPDAPPIRINLGETLLLVGRVEEAV 190 Query: 281 VILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +L + + +PHP +A +L S + + +A + Sbjct: 191 DVLSRASTDFPEDPHPLLALFRHYLESGEEDRAFAVLQEASRRAPDRADIQTDFGHVAGQ 250 Query: 338 MGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 +A A+ ++P L A +E+ N ++ + A Sbjct: 251 RNEFARAEEALERALAVSPGFTPAFVGLAAVLERVNR--EGELEGLRERASR 300 >gi|262304943|gb|ACY45064.1| acetylglucosaminyl-transferase [Armillifer armillatus] Length = 289 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEDCYNTALR----LCSTHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFTEDATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMGDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 ++ P Sbjct: 184 RLKPD 188 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 64/216 (29%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q + A + L++ +T ++ +L G A R KAL++ P+ Sbjct: 27 ANALKEKGQVSEAEDCYNTALRLCSTHADSLNNLANIKREQGFTEDATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + GD+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMGDVQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A ++ P+ + Y +L Sbjct: 143 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALRLK--PDFPDAYCNLSHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + G++K+ RL ++ Sbjct: 201 QMICDWSDYEGRMKKLVNIVAEQLGKNRLPSVHPHH 236 >gi|255010354|ref|ZP_05282480.1| putative N-acetylglucosamine transferase [Bacteroides fragilis 3_1_12] Length = 462 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 22/207 (10%) Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A + K +D +P P WV A + K++ +A+ + +E+ A + Sbjct: 172 EKATFFYNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAVESCDFAIAADEEFG--EAHI 227 Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLIS-----QNKKRKAEVI 282 + A SL + + + IA Y A+E L I A + R A Sbjct: 228 IKAHSLFHLENIEGAIAEYQKALEYKTLSPEFTYMFIGLAYAHQENWAEAAESYRLALQA 287 Query: 283 LEKIWKVNPHPEIANIYT-------HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +E+ P +++IY+ HL +L R ++ E+ + E ++ +I Sbjct: 288 IEES-GNGSSPLLSDIYSNKAVCASHLGDSAEAHRLCRLVK--ELAPQDAEPYLLEGRIY 344 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFL 362 +E G+ DQA A+ LA++ AP + ++ Sbjct: 345 MEEGNFDQARAEWALALRYAPEADTWM 371 >gi|309389278|gb|ADO77158.1| Tetratricopeptide TPR_1 repeat-containing protein [Halanaerobium praevalens DSM 2228] Length = 403 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 91/281 (32%), Gaps = 51/281 (18%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A K++ + + ++YL +I +++ A E L++ + +L Sbjct: 164 KKAEKLYKEIIEVKAQASDYLAL---AKIKEQNKKFKKAINYYENALKLNDSESSLYLNL 220 Query: 161 YFESCRIGDLNSAQRYATKALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + +A K ++ P + E+ + ++ A + K Sbjct: 221 AKLYQKTNNNKAAILTFKKGINQKADFTPYYIGLAESYFELQ----NYNEA----EKYLK 272 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A E N N + ++G + + + ++LK N + A + K + + Sbjct: 273 KAIELNNNSYYGYFLLAEVEVEQGRLNLALSNYNQALKYNPNYVEAYLAEGKIYLKEKDY 332 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +A + E NK+ S ++K Sbjct: 333 YRA-------------------------------ISSFSIAVEKNKDHAASRYYLAKAYY 361 Query: 337 EMGSIDQAHAKAMLAMKIA---PRKEIFLLLAQIEQANSHN 374 + ++ A A+ A+ + P+ F L QIE + + Sbjct: 362 QAEMLEAARAEIKKALHLDNNYPKAREF--LEQIEADLNLD 400 >gi|225444762|ref|XP_002279485.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1064 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 7/165 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + ++ Y A ++ P Y L ++GD S+ K L++ Sbjct: 285 ARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRSSLSNFEKVLEV 344 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ +A+ YV + +A +L + K + +A L + L +D G + Sbjct: 345 YPENCEALKALGHIYVQLGQTEKAQEYLRKATK--IDPRDAQAFLDLGELLITSDTGAAL 402 Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286 ++ A LK + + + + AE ++ Sbjct: 403 DAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEA 447 >gi|113475906|ref|YP_721967.1| hypothetical protein Tery_2266 [Trichodesmium erythraeum IMS101] gi|110166954|gb|ABG51494.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 1213 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 90/311 (28%), Gaps = 36/311 (11%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVS-------QQHTFHNEYLVYLLEVQIALAERQY 136 Y AL L + LA K S L+ L ++ Sbjct: 363 RYAALTQSL-----GDWELALKRWSEAVFKFPENIDFQVQKGNALINL---------SRF 408 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + + + R + +GD A + ++A+ P+ Sbjct: 409 DEAEAVFQQLKEKYPNRPHGYERYAALTQSLGDWELALKRWSEAVFKFPENIDFQVQKAN 468 Query: 197 QYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A Q K N + A L GD + ++ Sbjct: 469 ALINLSRFDEAEAVFQQLIEKYPNQPDGYERCAAL-------TQSLGDWELALERWENAI 521 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEI--ANIYTHLLSENTVG 309 + L + + +AE+ EK+ + P H + + LL Sbjct: 522 AKFPGHFNFYLQKGDVLANLFRYEEAEIWWEKVIALYPARHEGLYKSAALARLLGNREFA 581 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 +R + E + + +K + MG +A K + A++ P LL I Sbjct: 582 -WQRFEQAIEKFPGHIPAYCEAAKELIAMGRFAEAEEKFLQALQRNPNDLTTLLQGGILA 640 Query: 370 ANSHNTDKILY 380 + N + L Sbjct: 641 SQQGNRELALE 651 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 4/133 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G L AQ+ K +++ P+ W + Q + +W A+T + K Sbjct: 14 LQAGKLEDAQKEYQKLIELQPNFAWNYYYLGQLFFQQGKWQDAVTQYRKAIKLNPNS--- 70 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + + ++G + + + + +++ L + + + A + ++ +A + Sbjct: 71 -ATLHNSLAEALIEQGKLDEAINYSQKAIFLEPDLAIYNQTLALAYEAKLDLWQAFKTWQ 129 Query: 285 KIWKVNPHPEIAN 297 KI ++P+ +A Sbjct: 130 KILSLHPNHSLAT 142 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 21/232 (9%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTE 192 + A + + + + + R+GD A + ++A+ P Sbjct: 273 DEAKAVFQHLKEKYPNQPQGYENYARLIHRLGDGELALKLWSEAIIKFPKPIVFQVQKGN 332 Query: 193 AVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A++ + A Q K+K + + +SL GD + E Sbjct: 333 ALINL----SRFDEAEAVFQQLKEKYPNRPHGYERYAALTQSL-----GDWELALKRWSE 383 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLS--EN 306 ++ +I + +LI+ ++ +AE + L++ + PH Y L + Sbjct: 384 AVFKFPENIDFQVQKGNALINLSRFDEAEAVFQQLKEKYPNRPHG--YERYAALTQSLGD 441 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 LKR E+++ V + + + D+A A ++ P + Sbjct: 442 WELALKRWSEAVFKFPENIDFQVQKANALINLSRFDEAEAVFQQLIEKYPNQ 493 >gi|218263597|ref|ZP_03477671.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii DSM 18315] gi|218222607|gb|EEC95257.1| hypothetical protein PRABACTJOHN_03360 [Parabacteroides johnsonii DSM 18315] Length = 667 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 53/153 (34%), Gaps = 12/153 (7%) Query: 213 QKKKNAKEWNR--NRAILLIARSLENA---DKGDMIASYHDAIESLKLCDNSIMASICAA 267 +K + R + + N D+ A+ ++LKL + A + Sbjct: 512 KKLREEIHAQREIQKEYAHEYYLMGNECITKAHDLNAAIRSFDKALKLYPEFVDAWVRKG 571 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINK 322 +L+ +A L + ++NP A Y L + + ++ ++ Sbjct: 572 VTLLDLGDGFQAVTCLNEAVRLNPKSFKARYNRGKSYLQLKYYDEA--VSDFMKAVDLKP 629 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + +++ L +G + A +A ++ Sbjct: 630 KHAAAHEYLAEAFLHIGEEELARQHQDIADELR 662 >gi|218248948|ref|YP_002374319.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 8801] gi|218169426|gb|ACK68163.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801] Length = 363 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 84/265 (31%), Gaps = 11/265 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + N A K + +N Y L +A N A + P Sbjct: 83 GYLYAQKGNFRQAVKAYQQAVTLD-PNNADFYYALGFSLANIGDNENAASAYYYAIQLAP 141 Query: 151 A-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T+ L R D A + + + P+ + + KE +AI Sbjct: 142 RVTK--NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQ 199 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +LN K R +L A ++ + +++ + ++ + + + Sbjct: 200 YLNNAVKRFPNDLELRLLLATA----FLEQDNNELAFNQLKSAERISPGNPKVQLKIGRI 255 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVE 326 L QNK A ++I ++P A L +++ +G + L + E+ E Sbjct: 256 LEQQNKLDDALKTYQRITYLSPSSTEARAGVGRIQLATKDYLGAVITYRELASMLPETPE 315 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 + E G +A A Sbjct: 316 PYYYLGLAYKERGRKKEATKALEQA 340 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 78/249 (31%), Gaps = 42/249 (16%) Query: 112 QQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE--MMLQIPATREFAVYS-LYFESCRI 167 Q + +E L LL + + + YN A E +L + F+ LY + Sbjct: 33 AQQSTDSEELKELLRLGREYVDLKDYNSAIVTYEKAAILDGNNAKIFSGIGYLYAQK--- 89 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ A + +A+ + P+ A+ + A + + A + Sbjct: 90 GNFRQAVKAYQQAVTLDPNNADFYYALGFSLANIGDNENAASAYYYAIQLAPRVTK---- 145 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 I + + D + + L N+ A SLI Q + KA L Sbjct: 146 NYIGLGVVLLRQNDYQGAAEAYKRVIALDPNNSEAFAIMGSSLIQQKELDKAIQYLNNA- 204 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 +KR +E ++++ LE + + A + Sbjct: 205 -----------------------VKRF-------PNDLELRLLLATAFLEQDNNELAFNQ 234 Query: 348 AMLAMKIAP 356 A +I+P Sbjct: 235 LKSAERISP 243 >gi|172057801|ref|YP_001814261.1| TPR repeat-containing protein [Exiguobacterium sibiricum 255-15] gi|171990322|gb|ACB61244.1| Tetratricopeptide TPR_2 repeat protein [Exiguobacterium sibiricum 255-15] Length = 420 Score = 46.1 bits (108), Expect = 0.012, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 67/220 (30%), Gaps = 22/220 (10%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ-RYAT 178 +L + ++ +A KL+ ++ Y L +G + A +A Sbjct: 103 PRTLVLLADLYQSQGLDEVALAKLKEARELAPNEPLLAYGLAELYMTLGAFDQAVPLFAE 162 Query: 179 KALDISPDAPWVTEAVV-QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A D +A+ + + E+ AI + R+ L ++ Sbjct: 163 IAADPVLREELPLDALYAEALAMIGEFEEAIPLYERA-----VAERSDLHTLFGLAMTAH 217 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G + + + + A + A+S ++A ++++ Sbjct: 218 RVGQHQKAVETFQQLIAQDPDYTSAYVPYAESQAELGLTKEALNVIKQ------------ 265 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + ++ +L+ L + E V + AL Sbjct: 266 ---GIERDDYNDELRTMEALFLLKLGDREGSVKALREALA 302 >gi|300312874|ref|YP_003776966.1| TPR repeat-containing protein [Herbaspirillum seropedicae SmR1] gi|300075659|gb|ADJ65058.1| TPR repeat-containing protein [Herbaspirillum seropedicae SmR1] Length = 603 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 11/197 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G L A+ K L P + ++W A L + + + Sbjct: 20 QKGQLAPAEELYKKVLVKLPRHFEANYLYGMLKLHQEDWETAEAQLAKAIELNPD--HLD 77 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A +L + + D + +D + L + + + A + +L + R+A LE+ Sbjct: 78 TYFDHAGALAHLGRDDEAVARYDLV--LTVNADFVEALLARGAALRRLGRNREALADLER 135 Query: 286 IWKVNPHPEIANIY---THLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P+ A+ + ++L ++ + R + + +E+ + + Sbjct: 136 ATALA--PDNADAWFQRGNVLHDSYAYGDARESYERAVALRPDFIEAWFNLGNTCKDGNQ 193 Query: 341 IDQAHAKAMLAMKIAPR 357 +DQA A+++ P Sbjct: 194 LDQALRAYDRALEVQPD 210 >gi|289547832|ref|YP_003472820.1| hypothetical protein Thal_0055 [Thermocrinis albus DSM 14484] gi|289181449|gb|ADC88693.1| TPR repeat-containing protein [Thermocrinis albus DSM 14484] Length = 159 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 49/162 (30%), Gaps = 5/162 (3%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNS 172 E + A E + ++ T Y+ + +GD Sbjct: 2 KDLEREAEELFRKAYQLHMMGDIKRAIEFYQRSIEKKPTAIA--YTFMGWAYSMLGDYEK 59 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A KA+++ P+ + + + AI +L + R+ + + Sbjct: 60 AIELCLKAIELDPELGNPYNDIGSYLIALGRYDEAIPWLKRAIVAKNYEPRHFPHINL-- 117 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + KG + + +LK+ N A I + L N Sbjct: 118 AKVYLAKGMYKDALVELENALKIEPNFKPAHILKHQILAMLN 159 >gi|158424550|ref|YP_001525842.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571] gi|158331439|dbj|BAF88924.1| TPR repeat protein [Azorhizobium caulinodans ORS 571] Length = 679 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 89/270 (32%), Gaps = 15/270 (5%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + L + + + A E ++ A L F ++G A R A Sbjct: 24 DPRALLGQASALHRAGRMDEAIEACRAAAKVAPGFLDAHRMLAFALLQVGRAKEAVRAAQ 83 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 KA D++P P V + + ++A+ ++ K A N A +L Sbjct: 84 KARDLAPRDPNSHLLVGAGLLGQGDAAKALAAFDEAAKLAP--NLLEAHFQAGNALAAL- 140 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPE 294 G A+ +L L S+ A A + + +A E++ ++ P H Sbjct: 141 -GRFPAAIERYNRALALDPRSVEALTNRATTYARLARHAEALADCERLIEMQPWSPLH-L 198 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV--SKIAL--EMGSIDQAHAKAML 350 +A T L V L A E+ + +K AL G+ID L Sbjct: 199 VAKASTLLEMGEPVPALAAAEAAMAAAPTFAEAFHVAGQAKAALMDISGAIDLMTQALAL 258 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + P + LA++ + + Sbjct: 259 EPQPRPTVRVH--LARLLRMEERFAEARRQ 286 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 48/159 (30%), Gaps = 7/159 (4%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A ++ + L+ ++ G M + + K+ + A Sbjct: 4 NGAPVTAARQLSRVWSSMSSDPRALLGQASALHRAGRMDEAIEACRAAAKVAPGFLDAHR 63 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319 A +L+ + ++A +K + P H + L + L + Sbjct: 64 MLAFALLQVGRAKEAVRAAQKARDLAPRDPNSH--LLVGAGLLGQGDAAKALAAFDEAAK 121 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + +E+ +G A + A+ + PR Sbjct: 122 LAPNLLEAHFQAGNALAALGRFPAAIERYNRALALDPRS 160 >gi|34498498|ref|NP_902713.1| tetratricopeptide repeat protein [Chromobacterium violaceum ATCC 12472] gi|34104353|gb|AAQ60712.1| probable periplasmic protein [Chromobacterium violaceum ATCC 12472] Length = 385 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 51/160 (31%), Gaps = 9/160 (5%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + ML R+ L + + G ++ A+ K L+ + Sbjct: 84 GENDRAIRLHQQMLDSSDLPGEQRDLVRNELAQDFRKAGLVDRAEEILLKLLNGNMALA- 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ Y ++W +AI + + +A + A + K D + Sbjct: 143 ARRQLLDIYQQDRDWKKAIETARELRSDAHSFQHEVAQFYCELAQGELYKSDHSQARQYV 202 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 E+L + AS+ ++ A W+ Sbjct: 203 AEALAANRKCVRASLILGDIEFAEGNLEAA----IAAWQS 238 >gi|318040539|ref|ZP_07972495.1| TPR repeat-containing protein [Synechococcus sp. CB0101] Length = 590 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 85/277 (30%), Gaps = 33/277 (11%) Query: 94 SIAAHNIPLARKMHSYVSQQHT------------------FHNEYLVYLLEVQIALAERQ 135 ++A + A + + + + E + L Q AL + Sbjct: 38 AVAQGDATAAAYSNLAALELQSNRIEAAAALLEHALRLAPNNAEAWLNLGTAQHAL--GR 95 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 A E + T A +L I DL A + ++AL + P P V A Sbjct: 96 SAKAVESFRQAASLKPTMAKAYANLGHALQAIHDLPGALQAYSQALSLQPLYPEVLSARG 155 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + +I L Q + L L + G + + + ++L L Sbjct: 156 VALRKQGHINESIASLQQAINQRSPYPE----ALNNLGLSLQEAGQLEEALNCFEQALAL 211 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310 +L+ Q + +A+ ++ NP H +A H + + Sbjct: 212 TPEHPEILSNLGLALMEQGRIDQAKTCFQQALNYNPLYPEAHRHLAY-CVHGRDDAEPEQ 270 Query: 311 LKRA--LRLEEINKESVESLVIVSKIALEMGSIDQAH 345 RA L++ + ++ + K L+ A Sbjct: 271 AARACLEELQD-HPKAYHLSFCIGKYQLDRLDPGAAE 306 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 29/220 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDIS------------------PDAPWVTEAVVQQYVLA 201 LY ++ GD +A AL++ P+ + Sbjct: 34 LYQQAVAQGDATAAAYSNLAALELQSNRIEAAAALLEHALRLAPNNAEAWLNLGTAQHAL 93 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 ++A+ Q +A + +L+ D+ + ++L L Sbjct: 94 GRSAKAVESFRQAASLKPTM--AKAYANLGHALQAI--HDLPGALQAYSQALSLQP-LYP 148 Query: 262 ASICAAK--SLISQNKKRKAEVILEKIW-KVNPHPE-IANIYTHL-LSENTVGKLKRALR 316 + +A+ +L Q ++ L++ + +P+PE + N+ L + L + Sbjct: 149 -EVLSARGVALRKQGHINESIASLQQAINQRSPYPEALNNLGLSLQEAGQLEEALNCFEQ 207 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + E E L + +E G IDQA A+ P Sbjct: 208 ALALTPEHPEILSNLGLALMEQGRIDQAKTCFQQALNYNP 247 >gi|307183815|gb|EFN70463.1| Anaphase-promoting complex subunit 7 [Camponotus floridanus] Length = 572 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 31/215 (14%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 I +A Y +++ + N L Q A Sbjct: 300 TGEIYVAMAYSLYAARKFSRANT-----LTAQALNLNPNDIEATI--------------- 339 Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + ++ E + D A + A+ + P + +V V A+ + Sbjct: 340 LRGNIFIEQKKYQD---ALFFFRHAVQLKPYRYEPHKGLVDCLVGMHRLREALNIASSSC 396 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K R +L + S+ D + + + ++L + + A A+ + Sbjct: 397 KQLGHTAR---VLTLYASVLMKDPVSVSKAKNLLEKALSQDEVYLPAVYLLAEIYEQEMN 453 Query: 276 KRKAEVILEKIWKVNP----HPEIANIYTHLLSEN 306 A +LE+ + N H + +++ + +E Sbjct: 454 LEAAIELLERQVENNSTCKLHQTLGDLWARVHNEE 488 >gi|296158011|ref|ZP_06840844.1| cellulose synthase operon C domain protein [Burkholderia sp. Ch1-1] gi|295891779|gb|EFG71564.1| cellulose synthase operon C domain protein [Burkholderia sp. Ch1-1] Length = 1587 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 59/207 (28%), Gaps = 17/207 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL A L PD P + A+ + Y A + A+T + + Sbjct: 711 RQRGDLAGAYDVIAPWLAAMPDNPDLQAALGRLYSTAGDDRNAVTSYRVALQRKPDDLNL 770 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + A + + A ++L + ++ K A L+ Sbjct: 771 LQATISAAAGAKQFS----YAESLATQALNAAPGDPGVLATVGRMYRAEGKLSLASTYLQ 826 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSK------ 333 + P +AN + V + ++R E Sbjct: 827 RSLVAANTPLMANA--PRNPASNVPRGWEVAMRRIGATPLPGTNPFEGKTATVTPTDADN 884 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEI 360 AL GS + A A + P + + Sbjct: 885 AALAGGSYNAARASLPYSQSSLPTQTV 911 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 88/274 (32%), Gaps = 35/274 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G M +A + A + + ++ + + + L+ A A + + Sbjct: 407 GEMLLANGDPVGAEQAYRMALRRQADNPDAVRGLVGALAAQGRGD--EALQFANQLNAEQ 464 Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 ++ + + GDL SA+ AL +PD PW+ + + YV Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + ++ + L A +L +A+ D + I Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQL--------DRIPV 572 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + ++ A L+ V+ ++A + T L E + Sbjct: 573 A-----------QRTDAMTTLQHRLWVHQQADLAT--RMARTGQTQQALATLHAAEPVAG 619 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 S E + +++ + G ++A AM AP Sbjct: 620 NSPELIGVIAAAYQQAGDPNRALGLVRAAMNAAP 653 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 54/199 (27%), Gaps = 19/199 (9%) Query: 97 AHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-- 153 A + + A S+ L + + M+Q +T Sbjct: 218 AGDSTVGASAKKSWRQALLWLDARPSDAALYQAYLQTATDDAAVKARFDSMVQQDSTART 277 Query: 154 ------EFAVYSLYFE----SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + D+ +A+ + L SP+ + + + Sbjct: 278 RAQENAAVDARGRTIADGFAALDRNDVATARAKFSSVLATSPNDADALGGMGIAALKQER 337 Query: 204 WSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ A L + +N A+ + ++ G+ + ++ L Sbjct: 338 FAEARNDLERASRNGNPARWKTALDSATYWTYTSDAIGARSNGEFAKAKSLFERAIALNP 397 Query: 258 NSIMASICAAKSLISQNKK 276 + + A + + L++ Sbjct: 398 SDVTAQVLLGEMLLANGDP 416 >gi|237708531|ref|ZP_04539012.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229457460|gb|EEO63181.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 316 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 49/268 (18%) Query: 99 NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + A++M F ++E L + + A L+ M Sbjct: 32 DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91 Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + ++ + Y + D + + KAL + P + + K+ AI Sbjct: 92 QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + +++ + R+ + D + L L + A + + Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 L + N+ PE A ++ +N + ++ Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ ++ L D+A A A++I P Sbjct: 233 ILSGELYLANKDFDKALAIYDEAIEINP 260 >gi|332024785|gb|EGI64973.1| RNA polymerase-associated protein CTR9-like protein [Acromyrmex echinatior] Length = 1225 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 87/267 (32%), Gaps = 13/267 (4%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + + + V L + A E L Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224 Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 Q+ A+ L + + + +KA I P V + + K++ Sbjct: 225 QLDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 284 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263 ++ + L + E RA + +GD ++ ++ + ++ Sbjct: 285 NK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 343 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317 + + + A EK+ K P + ++Y + S++ K ++ Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403 Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344 E + VE+ + +++I LE ++ A Sbjct: 404 TEQFPDDVEAWIELAQI-LEQSDLNAA 429 >gi|326437136|gb|EGD82706.1| hypothetical protein PTSG_12001 [Salpingoeca sp. ATCC 50818] Length = 938 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 98/307 (31%), Gaps = 52/307 (16%) Query: 101 PLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEM--------MLQIPA 151 A ++ S+ H N Y + A Y+ A + + + + Sbjct: 427 EEAVRISCAASKDGDKHPNTGATYNNLGRTYDALGDYDKALASYQRAVEVFCDTLGEDHS 486 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKE 203 T A ++ GD + A Y KA+ I P + ++ ++ Sbjct: 487 TTGLAYGNIGTVHDSKGDYDRAVEYFEKAIAIVVAALGDEHPSVANLYNSMASAFMGQGR 546 Query: 204 WSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + +A+ + + + + R+L D+ + AI ++ Sbjct: 547 YDQALQMYEKDLQITQASLGEWHMGTAASYGGLGSAYRALGEYDRAIEMYEKDLAI-GVR 605 Query: 255 LC----DNSIMASICAAKSLISQNKKRKAE-------VILEKIWKVNPHPEIA------- 296 + + + ++ + +A I + HP++A Sbjct: 606 VMGEKHPDVATTYSNLGAAYSNKGEHDRAIEHFIKCLEITIAAFGNE-HPDVATCLNNLG 664 Query: 297 NIYTHL-LSENTVGKLKRALRL--EEINKESVESLVIV---SKIALEMGSIDQAHAKAML 350 + YT + +++ V L RA+ + + E+ V V + G DQA L Sbjct: 665 SAYTSIGAADDAVEFLHRAVEIRSAVLGNMHPETAVAVSNLGRALRATGDDDQALECFEL 724 Query: 351 AMKIAPR 357 A++I R Sbjct: 725 ALEINRR 731 >gi|34192824|gb|AAH32839.2| Interferon-induced protein with tetratricopeptide repeats 2 [Homo sapiens] Length = 484 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H +I Y + K + + + + + ++ I Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 A A A + + +LA + E+A Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 354 >gi|302849597|ref|XP_002956328.1| hypothetical protein VOLCADRAFT_97285 [Volvox carteri f. nagariensis] gi|300258440|gb|EFJ42677.1| hypothetical protein VOLCADRAFT_97285 [Volvox carteri f. nagariensis] Length = 575 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 45/299 (15%), Positives = 88/299 (29%), Gaps = 39/299 (13%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTE 192 Y+ A L+ +++ GDL++A A +PD + + Sbjct: 59 DYDAASYAFRTALEREPGNAVVLHAWATVEASRGDLSAAGSRFRAATQANPDMVHSYTSW 118 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A + + + + + LL A + ++ + ++ Sbjct: 119 ARMAAAAGDE------AAATRLFQEGYAADPMHVPLLHAWATFELNRDKQSTARKLLTQA 172 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-VNP-HPEI-ANIYTHLLSENTVG 309 L+L + + + Q KA + E+ V P P I A L S NT Sbjct: 173 LQLDPYHVPSWMAIGSLEWRQGNPAKAREVFERGLSMVGPSAPLISALAELELRSSNTKN 232 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA----------KAMLAMKIAPRKE 359 + RL + +L+ +K+ G+ +A +L + Sbjct: 233 ARELFARLRITAPSHIPALLSEAKMEHRAGNRTRAQQLYGEAAAALAAGVLHLAEGDVAL 292 Query: 360 IFLLLAQIEQANSHNT----------------DKILYWTQSAL--HAMPDPLWISDDGY 400 LLA +E +N W + L D + +G+ Sbjct: 293 AEELLAAVEAVEPNNGHMCYTRGLLCQREGALAAAEQWFRRGLVCRTSRDGALLCYEGF 351 >gi|254442510|ref|ZP_05055986.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198256818|gb|EDY81126.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 592 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 23/262 (8%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + N V + + + L+ ++ A E P E A L + G Sbjct: 285 SRAEQIAPNNANVLVEKGRTLLSSQKPKDALRAFEKATAQPNPHEAAYIGLAQATASTGK 344 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRA 226 A A P + + A+ Y+ ++ A+ + + NRN Sbjct: 345 PKQAIELLVAAETQYPKSAELLSALGTLYLSQQKLDSALDAFKRAHSLNPRNPQANRNLG 404 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LL+AR GD + ++ D+S +A A L Q + A +L++ Sbjct: 405 TLLLAR-------GDKSGLAYTENYLVRQPDDSEVALFTARNLLEKQGNPQAAAALLQRS 457 Query: 287 WKVNPHPE------IANIYTHLLS-ENTVGKLKRA-----LRLEEINKESVESLVIVSKI 334 + P +A+ Y L + + + +L A L ++ E+L + I Sbjct: 458 YDSLARPSNELRQLLASSYHQLSNLQASQKRLAPAIASLEQSLTIW-PDNYEALANLGMI 516 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 ++G+ ++A + + + P Sbjct: 517 NAQLGNHEKAESYLLQFTEAQP 538 >gi|182677748|ref|YP_001831894.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633631|gb|ACB94405.1| Tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 662 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 64/205 (31%), Gaps = 15/205 (7%) Query: 158 YS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + R+ + +A AL + PD Q + + A+ F ++ Sbjct: 141 RGVLLRDLGRLDEAIAALDI---ALMLQPDHAEALHTGGQILQASGHFEDALAFYDKALS 197 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A++ L+ + D A+ + L ++ +L + Sbjct: 198 LKPRF--IEALIDRGALLQTVKQFD--AALTCYNAAHALQPDNAELLNNRGTALQCFGRF 253 Query: 277 RKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A LE+ + P A + H+ S L R E+ E++ Sbjct: 254 SEALTDLERAIALR--PNFAQAWFNKGNVHIQSREPEQALACFKRALELRPAYGEAMSSQ 311 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356 + G D+A A + P Sbjct: 312 AVALQHAGRFDEALAAYDATLAFDP 336 >gi|115949770|ref|XP_001185743.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 583 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 5/145 (3%) Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + K L++ G++ + ESL+ + + A + A L Sbjct: 415 RIKYTPHHRSKDQWLVLYGCETQYKLGNLPEAESWFKESLRSKADHVPAHLTYANLLGKT 474 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVS 332 N+ +AE +LE+ + PE AN++ H +N ++ ++ + V + + Sbjct: 475 NRATEAERLLERAVSLE--PENANVFRHYAKDNEKAEVY-YRVAVDLKPDVANGHVNLGA 531 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 + L G ++QA A + A+ + P Sbjct: 532 MLHLN-GKLEQAQASYLKALSLKPD 555 >gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1] gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1] Length = 1711 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 96/309 (31%), Gaps = 49/309 (15%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMM 146 L + N A + + V++ + + + LL + ++ A LE + Sbjct: 239 SRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLART----GKHEEALNALEKL 294 Query: 147 LQ-IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAK 202 L+ P T + G A K+L+ P W+ + ++ + Sbjct: 295 LEYDPDFTEAQKLRGTVLAGL--GRFEEALGPLEKSLEKEPENYNLWLQKGLI--LLDTG 350 Query: 203 EWSRAITFLNQKKKNAKEWNR--------NRAILLIARSLENADKG-------------- 240 + AI + + ++ +LE +G Sbjct: 351 KLEPAIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRK 410 Query: 241 --------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + E++KL + A L + + KAE ++ K+NP Sbjct: 411 GIVLGKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPE 470 Query: 293 PEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 +I ++Y +S +G+ L+ ++ + + + + E+G ++A Sbjct: 471 -DIDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETF 529 Query: 349 MLAMKIAPR 357 P Sbjct: 530 EKLASENPY 538 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 76/261 (29%), Gaps = 43/261 (16%) Query: 135 QYNIAHEKLEMMLQ-IPATREFAVY-SL-YFESCRIGDLNSAQRYATKALDISPDAPWVT 191 +Y A + +L+ P RE + R+ + A + +A+ I P Sbjct: 147 RYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNE---AIKAFEEAIKIDPSYFEAW 203 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILLI------------------ 230 + + + A+ + + + +RA+ L+ Sbjct: 204 NCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFARVTEL 263 Query: 231 ---------ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L A G + + + L+ + A L + +A Sbjct: 264 DPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALG 323 Query: 282 ILEKIWKVNPHPEIANIYTH-----LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 LEK + PE N++ L + + +N ++ + + Sbjct: 324 PLEKSLEKE--PENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMGFALY 381 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 + ++A +++ P Sbjct: 382 SLERYEEALEAFKEGLRLNPY 402 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 35/258 (13%), Positives = 73/258 (28%), Gaps = 43/258 (16%) Query: 137 NIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A E +L+I + G +A Y K + + PD P ++ ++ Sbjct: 455 EKAEEAFAEVLKINPEDIDSLYNRGISLLKL--GRKETALEYLEKVVSLRPDYPDLSYSL 512 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLI-----ARSLENAD-------- 238 E+ +A+ + E R L + +L+ + Sbjct: 513 GVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPA 572 Query: 239 -------KGDMIASYHDAIESLKL-------CDNSIMASICAAKSLISQNKKRKAEVILE 284 KG + + E++K + A + + + + A E Sbjct: 573 SREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFE 632 Query: 285 KIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++ + P + A Y + E K +N + +K E Sbjct: 633 RVLEKKPDSDTAWYYRGMILYTLQRQEEAA---KAFESASRLNPGLYTAFEYRAKCLFET 689 Query: 339 GSIDQAHAKAMLAMKIAP 356 G + A ++ P Sbjct: 690 GQYEAAFEAFEAVLEKDP 707 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 27/185 (14%) Query: 188 PWVTEAVVQQ---YVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSLENADKGDMI 243 P + +A+ + + ++ A + KN + L+ R L+ + D + Sbjct: 1278 PELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQNE--DAV 1335 Query: 244 ASYHDAIESLKLCDNSIMASI---CAAKSLISQNKKRKA-EVILEKIWKVNPHPEIANI- 298 +++ A+E + + A A SL + R A +LE+ PE A++ Sbjct: 1336 EAFNRALE---IKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEES------PENADVL 1386 Query: 299 -------YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L E+ L++ L + + E+ ++ ++E+ ++A + Sbjct: 1387 YNRAVASFKTLNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMV 1446 Query: 352 MKIAP 356 ++ P Sbjct: 1447 LEWEP 1451 >gi|297516104|ref|ZP_06934490.1| tetratricopeptide repeat protein [Escherichia coli OP50] Length = 389 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVIPQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|254410290|ref|ZP_05024070.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196183326|gb|EDX78310.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 667 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 16/156 (10%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N A R + + + +L + + A +L + ++A Sbjct: 514 NTANAKTHWQRCYDLNTQQRPQEAIQACDRALAINPDYPEALWSKGAALDQLGRHQEALN 573 Query: 282 ILEKIWKVNPHPEIANIYTH--------LLSENTVGKLKRALRLEEINKESVESLVIVSK 333 + EK + P+ A + + E + L RA++L S + + ++ Sbjct: 574 LYEKATTLK--PDFAEAWINQGVALILLGQPEKAIPILDRAIQL---KPNSANAWINKAE 628 Query: 334 IALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQ 366 +E+ D A A A++I P L+ A+ Sbjct: 629 AYMELERYDDAIASLKKALEIQPNNEYAATMLIAAE 664 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 AI ++ ++ A+ +L+ G + + ++ L + A I Sbjct: 536 EAIQACDRALAINPDYP--EALWSKGAALDQL--GRHQEALNLYEKATTLKPDFAEAWIN 591 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLS-ENTVGKLKRALRLEE 319 +LI + KA IL++ ++ P+ A Y L ++ + LK+AL + + Sbjct: 592 QGVALILLGQPEKAIPILDRAIQLKPNSANAWINKAEAYMELERYDDAIASLKKALEI-Q 650 Query: 320 INKESVESLVIVSKI 334 N E +++I ++ Sbjct: 651 PNNEYAATMLIAAEA 665 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 10/134 (7%) Query: 170 LNSAQRYATKALDISPDAP---WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A + +AL I+PD P W A + Q + A+ + ++ A Sbjct: 534 PQEAIQACDRALAINPDYPEALWSKGAALDQLGRHQ---EALNLYEKATTLKPDF--AEA 588 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +L G + +++L NS A I A++ + + A L+K Sbjct: 589 WINQGVALILL--GQPEKAIPILDRAIQLKPNSANAWINKAEAYMELERYDDAIASLKKA 646 Query: 287 WKVNPHPEIANIYT 300 ++ P+ E A Sbjct: 647 LEIQPNNEYAATML 660 >gi|322701876|gb|EFY93624.1| DnaJ and TPR domain protein [Metarhizium acridum CQMa 102] Length = 520 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 86/306 (28%), Gaps = 39/306 (12%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A+ L++ A + V+ L Q LA + + A + Sbjct: 9 AVTASLLASA----------TNLVAHDIPVDLPVSTLLTSAQSHLARGETSEALAYYDAA 58 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + + ++ +G N A + L++ P + + +W Sbjct: 59 VAKDPSNYVTLFKRATTYLSLGRSNQASEDFGRVLELKPGFEGAHIQLAKIKAKVADWEG 118 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + K E + R+ + A+ + ++ + I + +I Sbjct: 119 ARSE-YMAAKRNDESTELVELAEAQRAADLAEAAERDKNWEECI-------SHAGVAILV 170 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 A S ++R + E + L L+L S++ Sbjct: 171 ASRAPSLRERRSRCR-----------------FQRGEIEEGMSDLHHVLQL---RPGSID 210 Query: 327 SLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 +++ + + D A A+ + P +I L + E+ + K Sbjct: 211 PHILISATTFYALADFDNAIAQVRKCLHSDPDSKICKALHKQERRHQKAFQKAESQLNRG 270 Query: 386 LHAMPD 391 Sbjct: 271 QTTSAG 276 >gi|212532633|ref|XP_002146473.1| heat shock protein (Sti1), putative [Penicillium marneffei ATCC 18224] gi|210071837|gb|EEA25926.1| heat shock protein (Sti1), putative [Penicillium marneffei ATCC 18224] Length = 578 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 48/158 (30%), Gaps = 12/158 (7%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A E L T + ++ A+ A K ISP+ Sbjct: 338 AYEKLGDLGNAIEYYNRSLTEHRTADVL--------TKLRAAEKAKIKAEKDAYISPEEA 389 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + Q+ +W A+ + K A E R R+ + D Sbjct: 390 EKARELGQKKFQEADWPAAVDAFTEMTKRAPEDPRG----FSNRAAALIKLMAFPQAVTD 445 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 E++K I A I A++L + + KA L + Sbjct: 446 CDEAIKRDPAFIRAYIRKAQALQAMKEYNKALDALTEA 483 >gi|187922595|ref|YP_001894237.1| hypothetical protein Bphyt_0588 [Burkholderia phytofirmans PsJN] gi|187713789|gb|ACD15013.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN] Length = 613 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 97/286 (33%), Gaps = 15/286 (5%) Query: 108 SYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--L 160 + Q + L +L ++AL Q A++ + + A + + Sbjct: 67 ASAEDQKSLPGVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEI 126 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + D +A + +P++ + VL+ + A L ++ Sbjct: 127 ALAAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGKPDDASPILARELARVPA 183 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 NR AIL + L + I H + LK N A + A+ + + A Sbjct: 184 DNRGSAILALQLLLS--RGPNRIGGLHVLQDLLKNDMNRPEAQLAIARQQLVSDDAPGAR 241 Query: 281 VILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 LE+ + P P A + + E + + + N +S ++ + ++++ L Sbjct: 242 KSLEQALALKPDYLPA-ALTLSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLAS 300 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 +D A + + K + L+ + + N ++ + Sbjct: 301 DRLDDAQKQFEIMHKNNANELTPLMALALIKIQQKNFNEAQAYLTQ 346 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 45/244 (18%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L Q+ LA + + A ++ E+M + A + +L + + N AQ Y Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMHKNNANELTPLMALALIKIQQKNFNEAQAY----- 343 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++ K + I + + ++ + Sbjct: 344 ----------------------------LTQYAQQAEKTPGADPGQAYIYLAQLSLEQKN 375 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A+ + + A I A+ L Q K A +L P P+ + Sbjct: 376 EAAASDWLNKISPSSQQYVPAQITRAQLLAKQGKVDDARKLL----ANLPAPDPRDQALL 431 Query: 302 LLSENT--------VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + ++ R + + + + A + G D A+ ++ Sbjct: 432 MRTDAAILFDAKRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYDVMEAQLRKLIQ 491 Query: 354 IAPR 357 P Sbjct: 492 TQPD 495 >gi|46136823|ref|XP_390103.1| hypothetical protein FG09927.1 [Gibberella zeae PH-1] Length = 613 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 64/197 (32%), Gaps = 5/197 (2%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +S+ A + N+ VY Q + A + + + + Sbjct: 368 ISLELGEPEKAE--AEFAKALEQDKNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKD 425 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 F+ L ++G + S+ + + P P V + + +S A+ + Sbjct: 426 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQGNFSEAVEKFD 485 Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + K+ + LI ++L K D + ++L + +A A+ Sbjct: 486 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEALCKKALIIDPECDIAVATMAQL 545 Query: 270 LISQNKKRKAEVILEKI 286 L+ QN A E+ Sbjct: 546 LLQQNNVPAALKYFERA 562 >gi|157149134|ref|YP_001456453.1| cellulose synthase subunit BcsC [Citrobacter koseri ATCC BAA-895] gi|157086339|gb|ABV16017.1| hypothetical protein CKO_04973 [Citrobacter koseri ATCC BAA-895] Length = 1194 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 70/195 (35%), Gaps = 5/195 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A I T +AV L + D +A+RY + L + Sbjct: 391 QGDAALKANNPDQAERLYRQARSIDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 450 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ S I L+ +++ + + L ++ ++G+ Sbjct: 451 GNSNAVRGLANIYRQQSPEKASAFIASLSSRQRQSIDDIERSLENDRLAQQAEALENQGN 510 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + L L S+ + ++ L + ++ +A+ + + + P+ P+ Y Sbjct: 511 WAQAAELHRRRLALDPGSVWVTYRLSRDLWNAGQRSQADAHMRALARQKPNDPDQVYAYG 570 Query: 301 HLLSENTVGKLKRAL 315 L+ N + A Sbjct: 571 LYLAGNDQDRAAMAH 585 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 98/326 (30%), Gaps = 30/326 (9%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A +++ + ++ L +A+A + Y A + Sbjct: 386 WLAIQQGDAALKANNPDQAERLYRQARSIDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 443 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV----VQQYVL 200 L++ + AV L + ++ A+ + + ++ + Q Sbjct: 444 QTLRMDSGNSNAVRGLANIYRQQSPEKASAFIASLSSRQRQSIDDIERSLENDRLAQQAE 503 Query: 201 A----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 A W++A L++++ + L + A Sbjct: 504 ALENQGNWAQA-AELHRRRLALDPGSVWVTYRLSRDLWNAGQRSQADAHMRALARQKPND 562 Query: 257 DNSIMASICAAKSLISQNKKRKAE-----VILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 + + A ++ N + +A + W N E+A+ + T +L Sbjct: 563 PD----QVYAYGLYLAGNDQDRAAMAHINNLPRSQWNSNIQ-ELADRLQNNQVLETASRL 617 Query: 312 K------RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-L 364 + A L S + ++ A + A A + P L L Sbjct: 618 RDSGKEREAETLLRQQPASTRIDLTLADWAQQRRDYSSARAAYDAVLAREPGNVDARLGL 677 Query: 365 AQIEQANSHNTDKILYWTQSALHAMP 390 ++ A + L A Sbjct: 678 TEVYIAQ-GDNAAARAELAK-LPAPA 701 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 47/160 (29%), Gaps = 12/160 (7%) Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + + L A R Y+ A + +L A L Sbjct: 618 RDSGKEREAETLLRQQPASTRIDLTLADWAQQRRDYSSARAAYDAVLAREPGNVDARLGL 677 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-----KEWSRAITFLNQ-- 213 GD +A+ A A +P +Q+ + + A N Sbjct: 678 TEVYIAQGDNAAAR--AELAKLPAPATGEPLSINMQRRMARAQAQLGDTVAAQQTFNTIV 735 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++ + A++L + A G+ + +++ Sbjct: 736 PQAKSQPPSMETAMVLRDAAGFQAQNGEPQQALETYKDAM 775 >gi|254374763|ref|ZP_04990244.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151572482|gb|EDN38136.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 385 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKVFKLIIAVALATLVGIWATKYHGYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSAFRFPYLLFSWVIGLFSVDKQER 87 >gi|82544265|ref|YP_408212.1| tetratricopeptide repeat protein [Shigella boydii Sb227] gi|81245676|gb|ABB66384.1| putative heat shock protein [Shigella boydii Sb227] gi|332094767|gb|EGI99811.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74] Length = 389 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + N SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|189463137|ref|ZP_03011922.1| hypothetical protein BACCOP_03848 [Bacteroides coprocola DSM 17136] gi|189430116|gb|EDU99100.1| hypothetical protein BACCOP_03848 [Bacteroides coprocola DSM 17136] Length = 316 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 81/198 (40%), Gaps = 15/198 (7%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + +A+ ++ D P + + Y+ A A L++ + N L+A Sbjct: 45 AIKCFEQAIALN-DEPETLQLLANAYIEAGRTDDARITLDR-LVDKTPDNIQ---ALLAL 99 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + D + +++KL + S A AAK+ +A V+L K + + Sbjct: 100 ASICYMQEDYESMDDACQKAIKLDETSAPAYYLAAKAARGMKNDLQAIVMLTKA--IMQN 157 Query: 293 PEIANIYTHLLSE------NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 E Y L +E + ++ ++ + ++L++ +I +G +++A + Sbjct: 158 EEYKEAYL-LRAEVLWDMRQAKDAMSDLNKVLSVSPDEEDALLLKGRIHAALGQVEEAQS 216 Query: 347 KAMLAMKIAP-RKEIFLL 363 +++ P ++ +LL Sbjct: 217 CFNQVLEVNPFNEKAYLL 234 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 18/203 (8%) Query: 99 NIPLARKMH------SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + AR M Q ++E L + + + A L+ ++ Sbjct: 32 DGIRARNMRQLPYAIKCFEQAIALNDEPETLQLLANAYIEAGRTDDARITLDRLVDKTPD 91 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTEAVVQQYVLAKEWSRAI 208 A+ +L D S KA+ + +P +A + + +AI Sbjct: 92 NIQALLALASICYMQEDYESMDDACQKAIKLDETSAPAYYLAAKA---ARGMKND-LQAI 147 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + +E+ A LL R+ D + D + L + + A + + Sbjct: 148 VMLTKAIMQNEEYK--EAYLL--RAEVLWDMRQAKDAMSDLNKVLSVSPDEEDALLLKGR 203 Query: 269 SLISQNKKRKAEVILEKIWKVNP 291 + + +A+ ++ +VNP Sbjct: 204 IHAALGQVEEAQSCFNQVLEVNP 226 >gi|188996311|ref|YP_001930562.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931378|gb|ACD66008.1| Tetratricopeptide TPR_2 repeat protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 938 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 63/167 (37%), Gaps = 12/167 (7%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL +I + + + + E + + + L + GD + A Y + L Sbjct: 752 SKLLLAEIYEKQNDLDNSIKIYEELKENDDVKFK----LAKILLQKGDYDKASAYFKELL 807 Query: 182 DISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + P ++ + + Y L A+++L K++ + + L+ +K Sbjct: 808 EKHPEKVNELSFYIGKTYYLMNNEKDAVSYLENGTKSSNYNDAAESYYLLGM---IYNKE 864 Query: 241 DMIASYHDAIESLKLCDNSIMASIC----AAKSLISQNKKRKAEVIL 283 + + + + + L + + AAK L+ K+++A +L Sbjct: 865 NPNKALNYFLNGIYLYPEAKDITAKSRIEAAKILLKAEKRKEASCLL 911 >gi|330961815|gb|EGH62075.1| peptidase aspartic, active site protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 654 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 92/314 (29%), Gaps = 45/314 (14%) Query: 78 KRNYDKGYKALYTGLMSIA----AHNIPLARKMHSYVSQ---QHTFHNEYLVY---LLEV 127 K GY L + A + + ARK + + E L L E Sbjct: 92 KARPKPGYLEGNQALRAYARQDYSGSASHARKAIAQAPKNLDYRMMLIEALQRQQRLDEA 151 Query: 128 QIALAERQYNIA----------HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 Q A+ A + ++ + + + GD +A A Sbjct: 152 QTAI--NDAEQALGPQPVLTRRRQAIQEQVAVDK-AATGYK-----ALARGDHETAVSEA 203 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A+ P + +V + +++ A + + N N A LL+ R Sbjct: 204 RDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNGNDATLLVQRGQMRQ 259 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPE 294 GD + D ++ + ++ A + + +A L++ P E Sbjct: 260 RLGDQSGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRLQQARGAGELQPGDE 316 Query: 295 IANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAK 347 + Y + + + KR R + ++ S + A + + Sbjct: 317 VQIAYFLSQAGDDKGALDTFKRVDRQSGLKPREVQDAAYSAMRTPDDAQAIAYFKRVLDY 376 Query: 348 AMLAMKIAPRKEIF 361 P +++F Sbjct: 377 QQTGDLQMPAQQVF 390 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 25/210 (11%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 L TG ++A + A + +F + L V + Sbjct: 168 LTRRRQAIQEQVAVDKAATGYKALARGDHETA--VSEARDAVRSFPKQMAYRKLLVSALI 225 Query: 132 AERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A+ QY A + AT + R+GD + A++ +A+ + + P Sbjct: 226 AQGQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQSGARQDFAQAMAVG-NLP 281 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SLENADKG 240 +A + Y + S A+ L Q + + A L +L+ + Sbjct: 282 LREQASL--YAAMGQPSEALQRLQQARGAGELQPGDEVQIAYFLSQAGDDKGALDTFKRV 339 Query: 241 D------MIASYHDAIESLKLCDNSIMASI 264 D A +++ D++ + Sbjct: 340 DRQSGLKPREVQDAAYSAMRTPDDAQAIAY 369 >gi|331235475|ref|XP_003330398.1| pre-mRNA-splicing factor prp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309388|gb|EFP85979.1| pre-mRNA-splicing factor prp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 933 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 93/285 (32%), Gaps = 42/285 (14%) Query: 131 LAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A + E P + + + ++ ES G + +A++ +A D++ Sbjct: 601 QTNNDVDGARKILGDAFEA---NPESEQVWLAAVKLESEN-GQIEAAKQLMKRARDVAGT 656 Query: 187 AP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 W+ AV ++ A+ + + I + K D+ + Sbjct: 657 ERIWIKNAVFERQ--HGSVDEALEITEKALVKFPSSEKLHMI----KGQILESKEDVSGA 710 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------------- 291 K C I I +++ KA I+E+ NP Sbjct: 711 RGAYAIGTKKCPKCIPLWILSSRLEERVGMTIKARAIMERARHHNPKNEELWSESCSIEE 770 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 H ++ + + RAL+ + S ++ S+ ++ Q A+ Sbjct: 771 RAGGHTTGSSTNASAVGIQARNMMSRALQ------DCPNSGLLYSQ-SIWYEPRPQRKAR 823 Query: 348 AMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A+K + + +A++ A DK+ W + A+ A D Sbjct: 824 GADALKKCNNDPRVIVTVARLLWAERK-LDKVRNWLEKAIVADSD 867 >gi|254412859|ref|ZP_05026632.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180594|gb|EDX75585.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 435 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 6/129 (4%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 E + GDL A + +AL I+P+ + AI +Q + Sbjct: 8 RG--REKAQQGDLEGAIQEFEQALRINPEFAEAYYRRGLARFDLGDCQSAIADYSQALRV 65 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E + RSL +G+ AS DA + L++ N A + K + Sbjct: 66 NPE----HLDSYLGRSLAYLAQGEAQASLEDAQQVLQIDGNREAAYKLQGTAYRRLGKTK 121 Query: 278 KAEVILEKI 286 +A ++ Sbjct: 122 EAIASFKQA 130 >gi|134296995|ref|YP_001120730.1| hypothetical protein Bcep1808_2904 [Burkholderia vietnamiensis G4] gi|134140152|gb|ABO55895.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia vietnamiensis G4] Length = 607 Score = 46.1 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 82/223 (36%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + A +A++ V + + L KN + NR A L IAR Sbjct: 169 ARELARATGETRGQAILALQALL---VRGADRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D + ++L++ + + A++ L +A I V + Sbjct: 224 --QQLAVDDKEGAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D A A Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFESMRKLDSKDPTPLMALALIKIQQKKLDDASAY 337 Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LAQI N + W Sbjct: 338 LKQYVQLGTKQPNLDVGQGYIYLAQI-AIEQGNDAQASQWLDK 379 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 92/261 (35%), Gaps = 11/261 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +L ++AL Q A++ + + A + + A A L Sbjct: 81 QVLAAEVALQRNQPAPAYQTYLALARDTRDPRMAQRATEI-ALGAQSPADALSAANLWLQ 139 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +PD+ ++ VLA + + A L ++ A R +AIL + L D Sbjct: 140 YAPDSNRASQVDAALLVLAGKPADAQPMLARELARATGETRGQAILALQALL--VRGADR 197 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + LK N A + A+ ++ + K A L++ ++ P+ L Sbjct: 198 VGGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKEGAAQSLKQALQIR--PDYLPAALML 255 Query: 303 LSENTVGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK---AMLAMKIAP 356 + + + + N +S ++ + +S++ L +D A + P Sbjct: 256 SQMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFESMRKLDSKDP 315 Query: 357 RKEIFLLLAQIEQANSHNTDK 377 + L L +I+Q + Sbjct: 316 TPLMALALIKIQQKKLDDASA 336 >gi|226288700|gb|EEH44212.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb18] Length = 747 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVL- 200 Q P + G+ A ++ AL + PD+ + +++ Sbjct: 428 QDPDALF--LRG--RLFYAQGENEQAIKHFKLALSLDPDSSQAIKYLRMVQKLLRMKDEG 483 Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++++ +AI ++ + + + LL R+ + S D ++L+L Sbjct: 484 NAAYKSRKYQQAIDIYSKALEVDPKNKNINSKLLQNRAQSYLNLNKYEKSIEDCTKALEL 543 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A AK+ +A L+KI + NP Sbjct: 544 DPSYVKAQRVRAKAYGGAGNWEEAVQDLKKISEANP 579 >gi|33865520|ref|NP_897079.1| TPR domain-containing protein [Synechococcus sp. WH 8102] gi|33632689|emb|CAE07501.1| TPR domain protein [Synechococcus sp. WH 8102] Length = 928 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 78/240 (32%), Gaps = 37/240 (15%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWN 222 + R A+ +A+ +PD W + AIT L Q ++ + Sbjct: 253 AYRSSRYAEAEIAFAQAVTQAPDHLWSWLQWANSQRRQGQIDAAITTLEQLTEQLPGAAD 312 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKL------CDNSI---------------- 260 R + L+ + + K A++ L D + Sbjct: 313 GWRNLALLHQQKGHLAKAREALENLLALQPNNLGSIGLLADGLVQCQALDDAESLLRSAT 372 Query: 261 ------MASI----CAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENT 307 ++ A L+ + KRKA L ++P +A L + Sbjct: 373 HGLGQQPKAVGLWHRLAHLLVQRGDKRKAFNALHNGLLLDPSDSACALAQATLLLEAGQP 432 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 LK L + E + +L ++I MG ++ + A ++ P + + LLL +I Sbjct: 433 EAALKAVNALLKHQPEQIAALQRKAEILQFMGELEASLALCRQGLQQEP-QRLELLLLEI 491 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 10/205 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVY--------LLEVQIALAERQYNIAHEKLEMM 146 +A +A + Y + F + L + Q + A LE + Sbjct: 245 VAFQQGRIAYRSSRYAEAEIAFAQ-AVTQAPDHLWSWLQWANSQRRQGQIDAAITTLEQL 303 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + +L + G L A+ L + P+ + V + Sbjct: 304 TEQLPGAADGWRNLALLHQQKGHLAKAREALENLLALQPNNLGSIGLLADGLVQCQALDD 363 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + L + + L + +GD +++ L L + ++ Sbjct: 364 AESLL-RSATHGLGQQPKAVGLWHRLAHLLVQRGDKRKAFNALHNGLLLDPSDSACALAQ 422 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 A L+ + A + + K P Sbjct: 423 ATLLLEAGQPEAALKAVNALLKHQP 447 >gi|207722026|ref|YP_002252464.1| tpr domain protein [Ralstonia solanacearum MolK2] gi|206587200|emb|CAQ17784.1| tpr domain protein [Ralstonia solanacearum MolK2] Length = 700 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 3/150 (2%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + A E + A + + +G + A +++L + A + A Sbjct: 165 LERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLA 224 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKES 324 ++ I +++ A +L+++ P HP A E L A + + S Sbjct: 225 EAEIGRHRHEAALRVLDRLSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALAPHS 284 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 E+ ++ +G D+A A ++ Sbjct: 285 AETHHALAMALQALGQTDEALPHFEQAARL 314 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 66/230 (28%), Gaps = 43/230 (18%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 RI + A A +A+ ++P + A+ + A+ Q + + Sbjct: 262 RRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQTDEALPHFEQAARLPGAVAED 321 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ R++ + G A+ ++L+ S+ A++ + + KA Sbjct: 322 ---ALVGRAILLMEAGRRDAALAAFDQALEQFPGSV-----QARAGRADARTFKAGD--- 370 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P+IA + L + R + K L++ QA Sbjct: 371 --------PDIAALEACLADGERRSQRDRISA-----------HFALGKAYLDLQDPAQA 411 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393 + + + D W A P+P Sbjct: 412 FHHLDAGNRQKRSTFTY------------DGDASSRWMAHIADAFPPEPH 449 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 79/266 (29%), Gaps = 31/266 (11%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A L++ A +L F G + A A A+++SP + + Sbjct: 166 ERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAE 225 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A+ L++ + L AR+ + A +++ L Sbjct: 226 AEIGRHRHEAALRVLDR----LSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALA 281 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 +S A +L + + +A PH E A ++E+ + + RA+ Sbjct: 282 PHSAETHHALAMALQALGQTDEAL----------PHFEQAARLPGAVAEDAL--VGRAIL 329 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQA--------HAKAMLAMKIAPRKEIFLL-LAQI 367 L E + + A + A A P LA Sbjct: 330 LMEAGRRDA------ALAAFDQALEQFPGSVQARAGRADARTFKAGDPDIAALEACLADG 383 Query: 368 EQANSHNTDKILYWTQSALHAMPDPL 393 E+ + + + A + DP Sbjct: 384 ERRSQRDRISAHFALGKAYLDLQDPA 409 >gi|71907572|ref|YP_285159.1| TPR repeat-containing protein [Dechloromonas aromatica RCB] gi|71847193|gb|AAZ46689.1| TPR repeat:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] Length = 952 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 107/314 (34%), Gaps = 43/314 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + A+ + AR + V + ++ L+ + I ++++ A +L+ +L+ Sbjct: 502 GTIKGASGDKAGARSAYLQVLAKDAAFAPSVLNLVRLDIGE--KRFDEARRRLDALLKKD 559 Query: 151 --ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + Y L + R A R+ TKA D+ P T A++ Y+ ++ +A+ Sbjct: 560 SNDYQVLFEYGLLEQ--RAERPAEAIRHLTKAGDVQRTDPGPTLALIDLYLNQRQGEQAL 617 Query: 209 -----------------TFLNQKKKNAKEWNRNRAILLIAR-------------SLENAD 238 L + + R +L A + Sbjct: 618 KAAKALVSKFSTSLRVQQALARTYLATGDAVNARNVLTTATRLAEFDPKAQVSIARMQLA 677 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--- 295 + + + ++L+ + + A A + + KA+V L + +P+ ++ Sbjct: 678 AANPNGAAYSVSKALQGNPDDVAALALAVQVEARRGDSGKADVALRTLTSKHPN-DVETI 736 Query: 296 -ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A ++ + +L +E+ + + + G +A A +K Sbjct: 737 RAGAELAMMRGQYQAAVTGYRKLVA-REETSGNALALVDAQTRAGESGKASAFLEAWVKT 795 Query: 355 AP-RKEIFLLLAQI 367 P + LA I Sbjct: 796 HPEDQRAQKALADI 809 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 84/263 (31%), Gaps = 11/263 (4%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 M +AA N A +S ++ L VQ+ A L + Sbjct: 674 MQLAAANPNGAA--YSVSKALQGNPDDVAALALAVQVEARRGDSGKADVALRTLTSKHPN 731 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + + G +A K L + A+V A E +A FL Sbjct: 732 DVETIRAGAELAMMRGQYQAAVTGYRK-LVAREETSGNALALVDAQTRAGESGKASAFLE 790 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K E R + L + G + + + L + ++ A L+ Sbjct: 791 AWVKTHPEDQRAQKAL----ADILFRVGQLPVAKQAYQKLLAANPDDAVSLNNYANLLLQ 846 Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLV 329 N A+ + EK ++P HP A+ + + E L+ + E+ + Sbjct: 847 MNDPS-AQQVAEKAINLSPNHPAYADTLGWILVHKEQLETGLRYLREARLRSPENGDIRF 905 Query: 330 IVSKIALEMGSIDQAHAKAMLAM 352 ++ + G D+A + A+ Sbjct: 906 HLAYALAKAGRRDEAKEELRAAI 928 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 86/251 (34%), Gaps = 15/251 (5%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR-----YATKALDISPDAPW 189 + + A + E M++ + A+ L GD A+ A A +P Sbjct: 476 KKDKAMKTAEAMVKQDSANLTALNFLGTIKGASGDKAGARSAYLQVLAKDA-AFAPSVL- 533 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +V+ + K + A L+ K ++ ++ L+ + E + I Sbjct: 534 ---NLVRLDIGEKRFDEARRRLDALLKKDSNDYQVLFEYGLLEQRAE--RPAEAIRHLTK 588 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIYTHLLSENT 307 A + + ++ Q ++ KA L + + + A T+L + + Sbjct: 589 AGDVQRTDPG-PTLALIDLYLNQRQGEQALKAAKALVSKFSTSLRVQQALARTYLATGDA 647 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 V + + ++ V ++++ L + + A A++ P L LA Sbjct: 648 VNARNVLTTATRLAEFDPKAQVSIARMQLAAANPNGAAYSVSKALQGNPDDVAALALAVQ 707 Query: 368 EQANSHNTDKI 378 +A ++ K Sbjct: 708 VEARRGDSGKA 718 >gi|328789632|ref|XP_396581.4| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Apis mellifera] Length = 1255 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 87/267 (32%), Gaps = 13/267 (4%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + + + V L + A E L Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERAL 224 Query: 148 QIPATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 Q+ A+ L + + + +KA I P V + + K++ Sbjct: 225 QLDGQCVGALVGLSVLKLNQQQPDSIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDY 284 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263 ++ + L + E RA + +GD ++ ++ + ++ Sbjct: 285 NK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPH 343 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317 + + + A EK+ K P + ++Y + S++ K ++ Sbjct: 344 FGLGQMYVYRGDAENAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKV 403 Query: 318 EEINKESVESLVIVSKIALEMGSIDQA 344 E + VE+ + +++I LE ++ A Sbjct: 404 TEQFPDDVEAWIELAQI-LEQSDLNAA 429 >gi|110802108|ref|YP_699265.1| TPR repeat-containing protein [Clostridium perfringens SM101] gi|110682609|gb|ABG85979.1| tetratricopeptide repeat protein [Clostridium perfringens SM101] Length = 311 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 6/194 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156 L + ++ Y+ + E + L+ + + A EK E L I + A Sbjct: 21 EGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA 80 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y L D A KA+DI+P + + AI + K Sbjct: 81 YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEY----YK 136 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E + I ++ + +Y ++L++ +A N Sbjct: 137 KTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVY 196 Query: 277 RKAEVILEKIWKVN 290 KA+ EK K N Sbjct: 197 DKAKKFYEKAIKKN 210 >gi|110801298|ref|YP_696667.1| TPR repeat-containing protein [Clostridium perfringens ATCC 13124] gi|168204828|ref|ZP_02630833.1| tetratricopeptide repeat protein [Clostridium perfringens E str. JGS1987] gi|168208689|ref|ZP_02634314.1| tetratricopeptide repeat protein [Clostridium perfringens B str. ATCC 3626] gi|168212976|ref|ZP_02638601.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str. F4969] gi|168215614|ref|ZP_02641239.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC 8239] gi|169343485|ref|ZP_02864484.1| tetratricopeptide repeat protein [Clostridium perfringens C str. JGS1495] gi|182624441|ref|ZP_02952225.1| tetratricopeptide repeat protein [Clostridium perfringens D str. JGS1721] gi|110675945|gb|ABG84932.1| tetratricopeptide repeat protein [Clostridium perfringens ATCC 13124] gi|169298045|gb|EDS80135.1| tetratricopeptide repeat protein [Clostridium perfringens C str. JGS1495] gi|170663553|gb|EDT16236.1| tetratricopeptide repeat protein [Clostridium perfringens E str. JGS1987] gi|170713212|gb|EDT25394.1| tetratricopeptide repeat protein [Clostridium perfringens B str. ATCC 3626] gi|170715614|gb|EDT27796.1| tetratricopeptide repeat protein [Clostridium perfringens CPE str. F4969] gi|177910444|gb|EDT72821.1| tetratricopeptide repeat protein [Clostridium perfringens D str. JGS1721] gi|182382051|gb|EDT79530.1| tetratricopeptide repeat protein [Clostridium perfringens NCTC 8239] Length = 311 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 6/194 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156 L + ++ Y+ + E + L+ + + A EK E L I + A Sbjct: 21 EGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA 80 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y L D A KA+DI+P + + AI + K Sbjct: 81 YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEY----YK 136 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E + I ++ + +Y ++L++ +A N Sbjct: 137 KTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVY 196 Query: 277 RKAEVILEKIWKVN 290 KA+ EK K N Sbjct: 197 DKAKKFYEKAIKKN 210 >gi|18310970|ref|NP_562904.1| tetratricopeptide repeat protein [Clostridium perfringens str. 13] gi|18145652|dbj|BAB81694.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 311 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 6/194 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156 L + ++ Y+ + E + L+ + + A EK E L I + A Sbjct: 21 EGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA 80 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y L D A KA+DI+P + + AI + K Sbjct: 81 YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEY----YK 136 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E + I ++ + +Y ++L++ +A N Sbjct: 137 KTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVY 196 Query: 277 RKAEVILEKIWKVN 290 KA+ EK K N Sbjct: 197 DKAKKFYEKAIKKN 210 >gi|296416317|ref|XP_002837827.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633710|emb|CAZ82018.1| unnamed protein product [Tuber melanosporum] Length = 553 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 51/165 (30%), Gaps = 16/165 (9%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A L Q P LY + G+ A + +AL PD + + Sbjct: 225 AMSLLRQNAQDPDALVLRGRILYAQ----GENQKASLHFQEALRCDPDMKQARIFLRRSR 280 Query: 199 VLA------------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 L ++ A ++ A L R++ N + + Sbjct: 281 ELEKKKEAGNEAFKKGDYKIARELYSEALAVDPSNKGTNAKLYQNRAVANTKLQNWEEAL 340 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D+ E++KL A AK+L +A L+ + NP Sbjct: 341 ADSDEAIKLDSTYTKARKTRAKALGQMGNWEEAVRELKAVSDANP 385 >gi|159044505|ref|YP_001533299.1| hypothetical protein Dshi_1957 [Dinoroseobacter shibae DFL 12] gi|157912265|gb|ABV93698.1| hypothetical protein Dshi_1957 [Dinoroseobacter shibae DFL 12] Length = 475 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 84/267 (31%), Gaps = 9/267 (3%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + L E + + A +L+MM++ A+ + R L A Y +AL++ P Sbjct: 26 RSLLREGRTDEARAELQMMIEADPQDTRAMMAFAMSLVREQRLEEAAPYVERALEVEPGN 85 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 Q V A ++ + R L+ + + A+ Sbjct: 86 TTAALMGAQIGVRGGNAEYAEAHYHKALQADPRNMR----ALMGLARLHGQNQKPEAAIE 141 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLS 304 +L++ S A L K +A+ L NP+ + A++ + + Sbjct: 142 VLQTALEVDPQSARVRRQLATLLQRTEKTEEAKAQLRAALTANPNDQGASVQLANICMRA 201 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--KIAPRKEIFL 362 +T ++ E ++ + + ++ L A A + I L Sbjct: 202 GDTAEAIQVLETALEAQPDNRRLTMSLGRMRLRAEDYAGAEATLRPLTTGQRGGMARIAL 261 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAM 389 + A I Q +L + Sbjct: 262 VQALIPQGKLTEARTLLASSSRGARTP 288 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 71/278 (25%), Gaps = 45/278 (16%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEM 145 +M+ A + R + + E L+ QI + A Sbjct: 52 TRAMMAFAMSLVREQRLEEAAPYVERALEVEPGNTTAALMGAQIGVRGGNAEYAEAHYHK 111 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 LQ A+ L + +A AL++ P + Sbjct: 112 ALQADPRNMRALMGLARLHGQNQKPEAAIEVLQTALEVDPQSA----------------- 154 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 R A LL + A A+ + AS+ Sbjct: 155 --------------RVRRQLATLL----QRTEKTEEAKAQLRAALTANPNDQG---ASVQ 193 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINK 322 A + +A +LE + P + L +E+ G L + Sbjct: 194 LANICMRAGDTAEAIQVLETALEAQPDNRRLTMSLGRMRLRAEDYAGAEATLRPLTTGQR 253 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + + + + + G + +A + + A + Sbjct: 254 GG-MARIALVQALIPQGKLTEARTLLASSSRGARTPSL 290 >gi|17227939|ref|NP_484487.1| hypothetical protein all0443 [Nostoc sp. PCC 7120] gi|17129788|dbj|BAB72401.1| all0443 [Nostoc sp. PCC 7120] Length = 290 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 72/209 (34%), Gaps = 20/209 (9%) Query: 160 LYFESCRIGD---LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L E+ ++G A A A ++P V + + K + AI LN+ Sbjct: 47 LAQEAAQLGQFQQYELALARARLASQLAPGNDKVWFLLGGLQLQTKNFDGAIASLNR--- 103 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-------NSIMASICAAKS 269 +K N A +L A N + A+ L L + A + Sbjct: 104 -SKTINPKNADVLFALGSANFQQKKYQAAIEHYQAGLALKPNEADGLFDLGNAYYMIGRL 162 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 + + KA K W P I NI + N +KR I+K++ E L Sbjct: 163 PDAIAQYNKAVAQDRKFW-----PAINNIGLINYEQGNVSEAIKRWQTAVSIDKQAAEPL 217 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ G Q + A++I PR Sbjct: 218 LALAVALYTKGDRQQGISLGEAALRIDPR 246 >gi|262305005|gb|ACY45095.1| acetylglucosaminyl-transferase [Plathemis lydia] Length = 275 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGFVEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 >gi|254784361|ref|YP_003071789.1| tetratricopeptide repeat domain-containing protein [Teredinibacter turnerae T7901] gi|237687029|gb|ACR14293.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae T7901] Length = 733 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 79/196 (40%), Gaps = 8/196 (4%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 NSA+++ AL + P + + + + E+ +AI ++Q + N A LL Sbjct: 413 NSAKQHCELALKLDPTHTGAIRTMAEIHRQSGEYDQAIQLIDQVLAREPD-NTPAARLLA 471 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + + D I+ + + + A+ + KA +K+ ++ Sbjct: 472 LTYHDKNESAKGVRILEDCIQ--RHPKDFVNYKDL-ARIYLDNGNLEKAITNYKKVLEIT 528 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHAK 347 P A + S +G+LK+A + E+ ++ L + + +G D+A + Sbjct: 529 PQNNAALNNLGI-SYYFLGELKQARKYFELATRLIQGLDAYSNLGSLNYFLGDYDKAAEQ 587 Query: 348 AMLAMKIAPRKEIFLL 363 +A+ ++P + L Sbjct: 588 FKIALAMSPTNALLQL 603 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 86/272 (31%), Gaps = 26/272 (9%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + A ++ V + N LL + + LE +Q Sbjct: 443 SGEYDQAIQLIDQVLARE-PDNTPAARLL-ALTYHDKNESAKGVRILEDCIQRHPKDFVN 500 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L G+L A K L+I+P A + ++ + + L Q +K Sbjct: 501 YKDLARIYLDNGNLEKAITNYKKVLEITPQ----NNAALNNLGISYYF---LGELKQARK 553 Query: 217 NAKEWNRNRAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + R L +L + + GD + +L + + + + A SL + N Sbjct: 554 YFELATRLIQGLDAYSNLGSLNYFLGDYDKAAEQFKIALAMSPTNALLQLNYADSLRNTN 613 Query: 275 KKR--------KAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEIN 321 K KA + E+I VNP +A Y L + R L Sbjct: 614 GKSGLAEESYNKAIALAEEIHFVNPEDNDANITLALSYLALHNPEQAEPYLRKAELNA-- 671 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + E + + + + G+ +A A + Sbjct: 672 PDYPEVIYVRLRYDIATGNFSEAFATLSELLD 703 Score = 37.6 bits (86), Expect = 5.4, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 25/199 (12%) Query: 59 FAVSRFFLSCPAMLFHMLH-KRNYDKGYKALYT-GLMSIAAHNIPLARKMHSYVSQQHTF 116 +S +FL +G A G ++ + A + Sbjct: 538 LGISYYFLGELKQARKYFELATRLIQGLDAYSNLGSLNYFLGDYDKAAEQFKIALA--MS 595 Query: 117 HNEYLVYLLEVQIAL-AERQYNIAHEKL-EMMLQIPATREF------AVYSLYFESCRIG 168 L+ L + +A E + + A +L + Sbjct: 596 PTNALLQLNYADSLRNTNGKSGLAEESYNKAIALAEEIHFVNPEDNDANITLALSYLALH 655 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A+ Y KA +PD P V ++ + +S A L++ +L Sbjct: 656 NPEQAEPYLRKAELNAPDYPEVIYVRLRYDIATGNFSEAFATLSE-------------LL 702 Query: 229 LIARSLENADKGDMIASYH 247 S ++ +A+ H Sbjct: 703 DAGYSKAILERDPDLAALH 721 >gi|224123642|ref|XP_002319130.1| predicted protein [Populus trichocarpa] gi|222857506|gb|EEE95053.1| predicted protein [Populus trichocarpa] Length = 923 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 21/257 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + N A + HS V + + + LL + + E + P R Sbjct: 15 SGNYKQALE-HSSVVYERSPQRTDNLLLLGAIYYQLQDYDMCIAKNEEALRLEP--RFAE 71 Query: 157 VYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y + GD++ A RY ++++ P+ + Y+ + A Q Sbjct: 72 CYGNMANAWKEKGDIDLAIRYYLVSIELRPNFADAWSNLASAYMRKGRLNEASQCCRQAL 131 Query: 216 K---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + N L+ A+ L + +Y +E+L++ +A A + Sbjct: 132 TLNPHLVDAHSNLGNLMKAQGL-------VQEAYSCYLEALRIQPTFAIAWSNLAGLFME 184 Query: 273 QNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVES 327 +A ++ K+ P P+ + N+Y L + + + + + Sbjct: 185 SGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKAL--GMPQEAIVCYQQAVQARPKYAMA 242 Query: 328 LVIVSKIALEMGSIDQA 344 ++ E G +D A Sbjct: 243 FGNLASTYYERGQLDLA 259 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 14/186 (7%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L L++ Q A+ L+I T A +L GDLN A +Y +A Sbjct: 144 LGNLMKAQ-----GLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEA 198 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P P + Y AI Q + ++ A+ + ++G Sbjct: 199 VKLKPKFPDAYLNLGNVYKALGMPQEAIVCYQQAVQARPKY----AMAFGNLASTYYERG 254 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295 + + +++ + A +L + +A + + P HP+ + Sbjct: 255 QLDLAILHYKQAIACDQRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPNHPQALTNL 314 Query: 296 ANIYTH 301 NIY Sbjct: 315 GNIYME 320 >gi|219111917|ref|XP_002177710.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410595|gb|EEC50524.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 977 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 8/166 (4%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TRE 154 A++I AR+++ + +L + E +N A E L+ +R Sbjct: 620 ANDIRRARQLYKAA--LDVDPRSSVAWLQLGVMEADEENWNEAETCFETALKFDRRNSRL 677 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 Y+L G+ A +AL +P V +A + A L Sbjct: 678 LQAYALMETKRPNGNSRKAIGLLERALKANPRDAGVLQAYALYVAELGDVDAARDLL--- 734 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + E N+ A + A ++ G++ + E + C Sbjct: 735 -RRGAEANKRHAPVWQAWAVLETRHGNVQEARSIFQEGIWACAQLT 779 Score = 43.4 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 89/293 (30%), Gaps = 56/293 (19%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + + G + AQ T AL I P + + +++ A +L NA Sbjct: 458 LAKKELQHGRVEEAQELYTIALQIDPRDGRAYLGMSRCASRRRDFKLAKVWLQTGISNAV 517 Query: 220 EWNR------NRAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 N A + ++L ++ G + + I + K A + + I Sbjct: 518 SVNENTMQADRGANPFLLQALGCLEENSGRLSEAEALYIAAAKSRPTHAAAWVSLGQLRI 577 Query: 272 SQ-NKKRKAEVIL----EKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN---- 321 + + A + E+ W+ P A++YT E ++RA +L + Sbjct: 578 RKLGQSANAGRVCFQSAEREWQRASLPPSAHVYTAWAALECEANDIRRARQLYKAALDVD 637 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE----IFLLLA------------ 365 S + + + + + + ++A A+K R + L+ Sbjct: 638 PRSSVAWLQLGVMEADEENWNEAETCFETALKFDRRNSRLLQAYALMETKRPNGNSRKAI 697 Query: 366 --------------------QIEQANSHNTDKILYWTQSALHA--MPDPLWIS 396 + A + D + A P+W + Sbjct: 698 GLLERALKANPRDAGVLQAYALYVAELGDVDAARDLLRRGAEANKRHAPVWQA 750 >gi|167042856|gb|ABZ07573.1| putative TPR domain protein [uncultured marine microorganism HF4000_ANIW137J11] Length = 548 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 19/195 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE--MMLQIPATREFA 156 + R M + V Q + A E + + M+L+ Sbjct: 255 DREARRAMLAEVEQALEEGHPS---------AALEGANRVMRRAQQDGMLLEDERLWAAK 305 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + A Y + AL+I+P + Y EW A + Sbjct: 306 ARALLRHRQ----YDRAIIYFSMALEIAPQDQQLWYDKGALYRRLGEWGGAARCF--AQA 359 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 ++ A L + ++ E + + + L+L A + + L Q + Sbjct: 360 TELDYTYPEAWLALGQARERLQELEP--AAEAFQTGLELGCEPAPAYLGLGRVLAGQGQV 417 Query: 277 RKAEVILEKIWKVNP 291 R+A LE+ + P Sbjct: 418 REALKALEQAIAIEP 432 >gi|125533068|gb|EAY79633.1| hypothetical protein OsI_34777 [Oryza sativa Indica Group] Length = 938 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 37/255 (14%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 + + + LL+ Q+ + A E + I + ++ L Sbjct: 67 RLQKARGANARPAAELLQAQLNAVQEDLKNAREH---LAAIDRDKAQLLHDLSLTRRLAD 123 Query: 169 DLNSAQRYATKALDISP-DAPWVTEAVVQQ-YVLAKEWSR---AITFLNQKKKNAKEWNR 223 D ++AQ A +ALD+ + + + ++W+ AI L + + A+ Sbjct: 124 DAHAAQSAAEEALDLERFKSIEREQLAIDLAQTKERDWNARCHAID-LRRAELAAELGTV 182 Query: 224 NRAILLIARS---LENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKK 276 + L + + + A E +L A+ AK + Sbjct: 183 KDELALAVEATNTARQIADANADKAATLAAEVSRLQSELETKAEEATAIVAKLESEASGL 242 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIA 335 R E+ N E + RA +L + + + + Sbjct: 243 RA---------------ELQNAEASRKEE-----VGRAEQLLHGLKVDIAYAKRAEADAN 282 Query: 336 LEMGSIDQAHAKAML 350 L Sbjct: 283 LAAQEWKTKAESLQA 297 >gi|148259123|ref|YP_001233250.1| TPR repeat-containing protein [Acidiphilium cryptum JF-5] gi|146400804|gb|ABQ29331.1| TPR repeat-containing protein [Acidiphilium cryptum JF-5] Length = 733 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 46/305 (15%) Query: 93 MSIAAHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQI 149 +++ A N ARK+ S+ +E L+ L Q A+ A E + Sbjct: 26 VALDAGNTRECARKLFQQASELAPSWDEPLIRL--AQSYRADGHVAEAKELYIQASIRNR 83 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-------------AVVQ 196 Y + + + D + A Y ++A D++P A ++ Sbjct: 84 WRIEPLLAYGIL--ALQSNDPHDAVGYLSRATDLNPTNHQAWHGLALALGALGLQGAALR 141 Query: 197 QYVLAKE-----------WSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIA 244 A ++ ++ +E AI L + +G Sbjct: 142 AMANAGNLAPDILHYAITYNELRDTVDHDLILQIREPKWTTAIELCLEANAALRRGGAEE 201 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299 + ++ + ++ + ++ AE+ L K P ++A Sbjct: 202 AIALLETAIDVEPDASDILALLGNAYLANQMPEMAELHLRKALLRAPENIDIANDLAVAL 261 Query: 300 THLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAMLAMKIA 355 + L + + S +++++ + + D A K Sbjct: 262 GRQYRFGDASDILNKLDI-----PANASSTILLNRATIRASAGDLAGSARDIKAATPKAN 316 Query: 356 PRKEI 360 R + Sbjct: 317 DRSRL 321 >gi|331005451|ref|ZP_08328830.1| TPR repeat containing protein [gamma proteobacterium IMCC1989] gi|330420727|gb|EGG95014.1| TPR repeat containing protein [gamma proteobacterium IMCC1989] Length = 391 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 73/194 (37%), Gaps = 12/194 (6%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ A+ K L+ P+ P A+ Y+ ++ +A L Q KN + Sbjct: 40 GEKVEAENLYKKLLNTDPENPNYNFALSSLYISQAQYQKAEVLLEQLLKNG----HHDQG 95 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-----EVI 282 + + + + + +E+ ++ A++ N KA +VI Sbjct: 96 IYYNLAYVKLETRQYDEAIYL-LENQSTLEDMPENIALLARAYHHTNNLEKAIELGNQVI 154 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 L+ +PH A ++ A + +++ + +++VI+S IA+E D Sbjct: 155 LDT--PDDPHKIGALALSYFDHGEYEEATHWAQKALSLDENNHQAMVILSSIAIEEQRFD 212 Query: 343 QAHAKAMLAMKIAP 356 +A +K P Sbjct: 213 EAQEHLEQTVKYYP 226 >gi|325283510|ref|YP_004256051.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus proteolyticus MRP] gi|324315319|gb|ADY26434.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus proteolyticus MRP] Length = 397 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 35/208 (16%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GDL A +A ++P + + + + A L + Sbjct: 188 QGDLPGAVHAFQEASRLNPQESVILFNLAETQYAGGDLRAATATLQRAVLAQP----RDG 243 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 I + A+ G+ + A +++L NS A+ + Sbjct: 244 INRAYFARLLAEGGNFAVARPQAQLAVQLAPNSAYAA-------GQRGVVS--------- 287 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 Y + +L+RALRL N + + ++ L+ G + +A A Sbjct: 288 ------------YLAREPQTARAELERALRLAGGN--YPDFSYYLGRLNLDAGDLTRARA 333 Query: 347 KAMLAMKI-APRKEIFLLLAQIEQANSH 373 A + + L +E++ + Sbjct: 334 NFTDAAATGENPEAFYFLGLSLERSGAG 361 >gi|225849177|ref|YP_002729341.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644765|gb|ACN99815.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 1131 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 72/164 (43%), Gaps = 7/164 (4%) Query: 133 ERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 +Y IA KL+ + LQ P+ + +L + + DL A+ Y L I Sbjct: 330 AGEYEIAESKLKELYLQNPSNIYVLL-NLGYLYLKKEDLEKAESYYRNVLFIDSKNIDAL 388 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMIASYH 247 + + Y+ + + A+ + K K + + + ++LI+++ E + ++ + Sbjct: 389 KGLKAVYIKTQRYEEALDLIE-KLKALGVYDQDEKKIKELILISKAQEEYKRKNLDLAEK 447 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A+E L+L N+ +A A + ++K + K ++++P Sbjct: 448 YALEVLELNKNNPVAYPILANVYKDRKDEKKFFQYITKAYQLDP 491 >gi|13172675|gb|AAK14189.1|AF316551_10 Vi biosynthesis protein VexE [Citrobacter freundii] Length = 660 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 36/206 (17%) Query: 124 LLEVQIALAERQY----NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL + L +QY ++A + SL + ++ A+ A + Sbjct: 114 LLVASVLLKSKQYATVADLAERAWLAFSGNSQIFALHLRSLTLVDKELQAISLARTQAQE 173 Query: 180 A------------LDISPDAPWVTE---AVV---------------QQYVLAKEWSRAIT 209 A P + A++ ++ AI Sbjct: 174 APPRGDMIETCLRFLNKSRLPEDHDLARALLPFFVLESQESAGLAVDTQCAVGKYQEAIQ 233 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + R L +A + + + +L +++ A + Sbjct: 234 TGESALGRGLDGAALRRSLGLAYYQSGRSREAKLQAAEHWRHALDFNPDNLRIVTLYADA 293 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEI 295 LI + KA +L++ + HP++ Sbjct: 294 LIRTGQNEKAIPLLQQ--SLATHPDL 317 >gi|332709298|ref|ZP_08429260.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L] gi|332351844|gb|EGJ31422.1| Tfp pilus assembly protein PilF [Lyngbya majuscula 3L] Length = 485 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 63/176 (35%), Gaps = 10/176 (5%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHS-YVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 +G+ L ++ + +A ++ L L Q +++ A Sbjct: 130 KAQGHYKLGKAFLAQGKPDRAIACFQNAIERDSSLWVAYYELGDCLIAQ-----GKWDNA 184 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 +L + + Y + + G +++A +++++ P+ P ++Q + Sbjct: 185 IACYRKLLDLDPNQAKGHYKIAGIWLKQGMVDTAIAAFRRSIEVDPNFPGAYRELIQLLI 244 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++W AI ++ + + +L KG++ +Y ++ +L Sbjct: 245 QQQKWDEAIVSCRAVIATVGDYP--WTYVQLGDAL--VKKGELTEAYTCYQKAAQL 296 Score = 37.6 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 9/180 (5%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 +A AL + PD P ++ + Y I Q + + + + Sbjct: 77 WQAAIASYYHALSLQPDFPEAYWSLAEIYSQLGNKDEEIECWYQTLRLKPQSAKAQGHYK 136 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + ++ +G + +++ + +A LI+Q K A K+ + Sbjct: 137 LGKA--FLAQGKPDRAIACFQNAIERDSSLWVAYYELGDCLIAQGKWDNAIACYRKLLDL 194 Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +P H +IA I+ +T + R E++ + + ++ ++ D+A Sbjct: 195 DPNQAKGHYKIAGIWLKQGMVDTA--IAAFRRSIEVDPNFPGAYRELIQLLIQQQKWDEA 252 >gi|296124437|ref|YP_003632215.1| hypothetical protein Plim_4208 [Planctomyces limnophilus DSM 3776] gi|296016777|gb|ADG70016.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus DSM 3776] Length = 1001 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 87/276 (31%), Gaps = 18/276 (6%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRI 167 + H + +I L A+E+LE + + R + L + + Sbjct: 82 ANSPHPLTGPQYAEIALARIDLETGHRARAYERLEALKKLHSEQPRILGL--LAWYAFLN 139 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G L+ A+ A +A+ I D W + + Y +A + +A Sbjct: 140 GKLDVAETSAQEAIRIEADELWARRTLAEVYQATGRLKQADEGWRYFVRYYNRVQPEKAE 199 Query: 228 LLIARSLENADKGDMIASYH--------DAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 L+ + + I++LK A + + L+ + K +A Sbjct: 200 ELLLAAEGSLAYARWHTGKQIFDFVLNTLCIDALKADPLFWQAHELSGRLLLEKYNKPQA 259 Query: 280 EVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + + +NP + + + A + + + ++++ L Sbjct: 260 QQEFQAALAINPRAVTVLLGRAQAAAQDYDWDESNRLAKEVLKNAPGEPLAHTLLARSLL 319 Query: 337 EMGSIDQAHAKAMLAMK---IAPRKEIFLLLAQIEQ 369 + A + LA P ++ AQI++ Sbjct: 320 FSNQPEAALEQLQLAKAICPTDPTTTGLIVAAQIQR 355 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 6/154 (3%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ A + A E+L++ + A+I A+ + KA L N Sbjct: 757 AAMLKAKDRRRDEARKLAREALEIDPHCATAAIALAELDLRGEAPEKAIQKLASA-LDNT 815 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAK 347 P+ + L + AL+ + + S V +++I + + A Sbjct: 816 QPDHQLLQRLLPLLIQTKRWDEALKYASLAETTFPSDISSTVALAEILPHFMDLPRYKAV 875 Query: 348 AMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380 + + L A+I S + Y Sbjct: 876 LEKLSMYENDESEYRLQRAEIAWKESDLPNVARY 909 >gi|206559899|ref|YP_002230663.1| putative lipoprotein [Burkholderia cenocepacia J2315] gi|198035940|emb|CAR51832.1| putative lipoprotein [Burkholderia cenocepacia J2315] Length = 286 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 14/163 (8%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL A QY+ +L P L + GD A + + Sbjct: 101 PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLEQ 159 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++P + + + + A L + E + +L L Sbjct: 160 ATALAPTDAATLSDLAYSKMRDGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLAT 215 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 G + ++ KL A + I ++ + A + Sbjct: 216 GHAKDARRL-MDQQKLSP--------AVRGQIRDDETKVAAAM 249 >gi|157812768|gb|ABV81129.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Cypridopsis vidua] Length = 289 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 +P A ++ + H + L L I + A + + P A Sbjct: 34 GQVPEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYCKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLQEALAHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ + P+ P + + A N + + A L + Sbjct: 10 RRAIALQPNFPDAYCNLANALKEKGQVPEAEDCYNTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + ++L++ A A L Q K ++A ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYCKALEVFPEFAAAHSNLASVLQQQGKLQEALAHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 21/177 (11%), Positives = 53/177 (29%), Gaps = 14/177 (7%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL + P + A + + E+ A + + Sbjct: 46 ALRLCPSHADSLNNLANIKREQGYIEEATRLYCKALEVFPEF----AAAHSNLASVLQQQ 101 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 G + + E++++ A +L + A + ++NP H Sbjct: 102 GKLQEALAHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSN 161 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS---KIALEMGSIDQAHAKA 348 +A+I H S N ++ ++ + ++ ++ +I + D + Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCLQIVCDWSDYDARMKRL 216 >gi|150865560|ref|XP_001384827.2| hypothetical protein PICST_46600 [Scheffersomyces stipitis CBS 6054] gi|149386816|gb|ABN66798.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 637 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 25/195 (12%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDL 170 Q NE V L Q+ L + + A + + + + + + + DL Sbjct: 243 QRLEQNEPSVISLIAQVLLLKDEEIQAVTTMSEGIARDRRDADLLLLQAEFCMNKKRNDL 302 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAIL 228 A A +A+ +P +V+ Y ++ A+ LN + +++ R + Sbjct: 303 --ALDLAKQAVKSAPSDFKSWSMLVKVYTKLGDFENALLTLNSCPMNSHKEKYTLRRVVP 360 Query: 229 LIARSLEN---------ADKGDMIASYHDAIESLKLCDNSI--MASICA---AKSLISQN 274 L + + + ++S A E L A+ AK+ Sbjct: 361 LRGGNEDLHLPSPVDVTLEDVSYLSSQDVANEQRNLDPQLANLPAANLKSTFAKAYDLLT 420 Query: 275 KKRKAEVILEKIWKV 289 +++ W+ Sbjct: 421 DI-----VVKTGWQT 430 >gi|78358810|ref|YP_390259.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221215|gb|ABB40564.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 208 Score = 46.1 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 14/163 (8%) Query: 129 IALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 L++R + A + ++ + + + GDL+ RY +A Sbjct: 35 ALLSKRDWAAAEQSFRECVRNSPRFAEAFVQLGGICLQ---RGDLDGCMRYNEEAAQCRA 91 Query: 186 D--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 PW A V E AI L + K ++ + +A L A + D Sbjct: 92 KFPVPWANIAFVHLQ--RGEPEPAIAALKKALKWDPDFVQAKATLATAYFM----MEDYD 145 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + ++ + A A + + + KA ++ Sbjct: 146 MVLDVCKQIIQKEPSFAPAYNNMALAYFEKGEFAKAVQYADEA 188 >gi|223938612|ref|ZP_03630503.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223892731|gb|EEF59201.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 745 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 9/179 (5%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAA 267 T KK N A+ L +R+L +G + + +LK+ + A I A Sbjct: 183 TTEELKKMERTRLRANHALELTSRALAENHRGKALVESEPFLASALKIDPEFMPALIVMA 242 Query: 268 KSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + + Q + +A I +K + H + IY + E + + L+ +++ Sbjct: 243 QIKVWQGQTEEATAIAKKAVAIDQDFASAHETLGLIYL-MKGEPFLAR-DEFLKAIDLDP 300 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380 ++ ES +S I + ++ A + P LA+I + + +L Sbjct: 301 DNSESYQQLSVIYGQREKWVESVKCLEKAKALEPFNGTVRAELARIHASQGERENAVLE 359 >gi|152980764|ref|YP_001354355.1| tetratricopeptide repeat protein [Janthinobacterium sp. Marseille] gi|151280841|gb|ABR89251.1| N-acetylglucosaminyl transferase [Janthinobacterium sp. Marseille] Length = 391 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 85/236 (36%), Gaps = 17/236 (7%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +L P + A Y L + G L+ A+ + +D A Sbjct: 84 GETERAIRVHQNLLARPDLPLEHKVHAQYELGQDYLNAGLLDRAEETFNQLVDTQYGAQ- 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 A+++ Y KEW RAI + +++ + A + + A+ Sbjct: 143 ARRALLEIYQREKEWERAIQAAHALQESGAGGRQKEIAQFYCELAQDELVHTHPDAAITL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSE 305 ++L S+ A+I + ++Q A W+ H P +A + L+ Sbjct: 203 LEKALAADRKSVRATILLGDAQLAQGDTESAL----LTWRRVEHQSVPHVALVAQRLMDG 258 Query: 306 -NTVGKLKRALRLEEINKESVESLVIVS---KIALEMGSIDQAHAKAMLAMKIAPR 357 VG+ + + L + S+ ++ K LE+ +D A+ ++ P Sbjct: 259 YRAVGRAQEGVNLLKFYLAEASSIDLLEVVFKAVLELEGVDAANQMVSDELRRTPT 314 >gi|88812108|ref|ZP_01127360.1| hypothetical protein NB231_03320 [Nitrococcus mobilis Nb-231] gi|88790612|gb|EAR21727.1| hypothetical protein NB231_03320 [Nitrococcus mobilis Nb-231] Length = 755 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 53/168 (31%), Gaps = 19/168 (11%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA----------------SYHDAIE 251 + + + A + +A + + + + D A + Sbjct: 570 LADIPAARVPAADREVLQAAIADYMAAQTFNADDPAAHVNLGNFYTVQGKKALAERSYRL 629 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSENTV 308 ++ L + + A + A ++ K E +L + P ++ + + E+ Sbjct: 630 AIDLDPSWVPAYVNLADLFRRMDQDSKGEQVLRSGIRRLPQAADLRYSLGLLLVRQEDLP 689 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L + ++ + + + G + +A A A++ AP Sbjct: 690 AALVSLRQAADLAPANAHYSYVYAMALQNAGQLREARAVVDEALEQAP 737 >gi|118580891|ref|YP_902141.1| hypothetical protein Ppro_2478 [Pelobacter propionicus DSM 2379] gi|118503601|gb|ABL00084.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 884 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 54/176 (30%), Gaps = 14/176 (7%) Query: 98 HNIPLARKMHSYVSQ---QHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPAT 152 N+ + + H+ + N V L Q AL + + A + L T Sbjct: 706 GNLLESARDHNQAMAMYDEALKKNPNYVPALFAQGALLDSTGKKKEAVARYRATLAKSET 765 Query: 153 REFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ +L Y + G A R A A + P + + + + + A L Sbjct: 766 YVPALNNLAYLCASGFGSKEEALRLAVTAFKLEPGNAGIMDTLGFALLKNRRLDDAAKVL 825 Query: 212 NQK---KKNAKEWNRNRAILLI-----ARSLENADKGDMIASYHDAIESLKLCDNS 259 + + A++ AR+ K ++ DA + L Sbjct: 826 ERASTLLPTNPTVTYHLALVYAERGDRARATTLLQKSLSQGAFADAPAARSLLAGL 881 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 98/306 (32%), Gaps = 42/306 (13%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 KGY G + + A K+ +L + A Sbjct: 402 KKGYFYFSRGKNAEGESELATAVKVAPDALN---------SRMLLASYYMRSGSAPKALN 452 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 L+ L S+ + A KA + P P + + Y + Sbjct: 453 VLKGGLSGKKGDALLYNSIASVHLSQNRPDLALASIQKAKQVDPAFPASYQNLATYYAAS 512 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN--------------ADKGDMIASYH 247 ++ AI + + + RA+L +A E D G A Sbjct: 513 GKYDNAIAEYSALLR--VDPRNLRAMLGLAALYEIKGNDREALAFYDRATDTGQPAAFLT 570 Query: 248 DAI---------ESLKLCDNS-------IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A +++K+ D + A + L+ + + ++A + +++ V P Sbjct: 571 KATYLAKKRETGKAIKVVDELLKKDSRNLAALEMKGRLLMVEKEYKQAVKVFDEVEAVKP 630 Query: 292 HPEIA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +A I ++ ++T + +A + S ++++ + +G ++A A+ Sbjct: 631 DAGVALKIGAYVAMKDTSKAVSQARVFIDKYPRSARGYLVLASVHESLGDRNRAMAEVRN 690 Query: 351 AMKIAP 356 +++ P Sbjct: 691 GLRVEP 696 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 78/239 (32%), Gaps = 14/239 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E +L + + A Y GDL A A + P Sbjct: 208 GNRDRALEIYTRILSMDRSETLAAYKSGLIQIEKGDLPKADGIADSMIKEFPKRAEGHRL 267 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 K+++ A+T L K A + L + S + L Sbjct: 268 KGLVLYQRKQYAEAMTSLQNSIKIAPTLEAYYFMGLCQYGRGELES-----SLSQFRQVL 322 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----PHPEIANIY-THLLSENT 307 +S A + A L++Q + A ++K+ + + H + N Y + + Sbjct: 323 DRVPSSRQARLMTATVLLAQKRVDDAIGEIKKVLQADDNDAVAHNLLGNAYMAKGMFDEG 382 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +L RA I+ V++ + G + ++ A+K+AP +L Sbjct: 383 MRELNRA---TSIDPRIVDAYLKKGYFYFSRGKNAEGESELATAVKVAPDALNSRMLLA 438 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 96/289 (33%), Gaps = 13/289 (4%) Query: 105 KMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYF 162 K V + + L L ++ ++ + E++Y A + + + P Y Sbjct: 583 KAIKVVDELLKKDSRNLAALEMKGRLLMVEKEYKQAVKVFDEVEAVKPDAGVALKIGAYV 642 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + D + A A +D P + + + + +RA+ + + E Sbjct: 643 ---AMKDTSKAVSQARVFIDKYPRSARGYLVLASVHESLGDRNRAMAEVRNGLR--VEPG 697 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A++ + LE+A + + +D E+LK N + A L S KK++A Sbjct: 698 NGEALVRLGNLLESARDHNQAMAMYD--EALKKNPNYVPALFAQGALLDSTGKKKEAVAR 755 Query: 283 LEKIWKVNPH--PEIAN-IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + P + N Y + L+ A+ ++ + + + L+ Sbjct: 756 YRATLAKSETYVPALNNLAYLCASGFGSKEEALRLAVTAFKLEPGNAGIMDTLGFALLKN 815 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 +D A A + P + A + + Q +L Sbjct: 816 RRLDDAAKVLERASTLLPTNPTVTYHLALVYAERGDRARATTLLQKSLS 864 >gi|332860993|ref|XP_521123.3| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Pan troglodytes] Length = 1032 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 73/227 (32%), Gaps = 7/227 (3%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ N +V+ + + ++A + +++ A +L Sbjct: 286 RAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANA 345 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A+ AL + P + A+ + + E+ Sbjct: 346 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-- 403 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + E++++ A +L + A Sbjct: 404 --AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCY 461 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE-INKESVESLV 329 + ++N P A+ +++L S + +R +L + E+ + Sbjct: 462 TRAIQIN--PAFADAHSNLASIHKTDYDERXEKLVSMWADQXRENRL 506 >gi|196249188|ref|ZP_03147887.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16] gi|196211417|gb|EDY06177.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. G11MC16] Length = 1386 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 79/253 (31%), Gaps = 17/253 (6%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE 163 + + Q L + L +IA +Y A LQ P E Y+ Sbjct: 546 RAEQALKQAKGKRQSPLYHYLRGRIAFFMSRYEEAVRHFRASLQLDPDQPEVWSYTALAS 605 Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G + A+ + P ++ + + A + + + Sbjct: 606 AYA-GYTERGLVCSRIAVHLHPGDLFIETNHGLLLFHAKRL--AEARKWFD----HLVRR 658 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R A L R+ + + G + + L + A K+ +A+ Sbjct: 659 ERRDAHLWYERARCDLELGHRRKAERGFRVAKALDPREPYPYVMLADLYDDDGKREQAKA 718 Query: 282 ILEKIWKVNPHPEIANIYTHL----LSENTVGKLKR-ALRLEEINKESVESLVIVSKIAL 336 +L++ +A +Y L + E V + + + V + + ++ + Sbjct: 719 VLKEGLAAAE--RLAPLYVRLGDAYMDEGEVEQAASCYEKAIRHDDNDVFAHLGLASALM 776 Query: 337 EMGSIDQAHAKAM 349 E G+++ A M Sbjct: 777 ERGNVEAAKRHVM 789 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 84/296 (28%), Gaps = 52/296 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREFA 156 + R+ V ++ E L L + E + A E ++ FA Sbjct: 708 DDDGKREQAKAVLKEGLAAAERLAPLYVRLGDAYMDEGEVEQAASCYEKAIRHDDNDVFA 767 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE----WSRAITFLN 212 L G++ +A+R+ V++Q + W A +L Sbjct: 768 HLGLASALMERGNVEAAKRH-----------------VMEQRTRFADDSEYWLNAGKWLL 810 Query: 213 QKKKNAKEWNRNRAILLIARSLENAD----------------KGDMIASYHDAIESLKLC 256 + + A+ + L A+ + + Sbjct: 811 VHGVANEAEGKQLALSWLENGLRLAEFDIEEVYEFYIDQLTTPALRERGRTFLEQLIAAR 870 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLK 312 A Q++ KA + K HP +A + + L + Sbjct: 871 PGLAPAHSALGVLYERQSRPSKAMAVYRKA-AAMGHPLSLYRLAELCSALGRYEEAK--Q 927 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + + ++ + G+ +Q HA + A+++AP L A IE Sbjct: 928 HYESCLDADPSFAFCHFRLAALYEMEGNEEQQHAHLLEAVRLAP------LRADIE 977 >gi|115376430|ref|ZP_01463666.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310823257|ref|YP_003955615.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115366562|gb|EAU65561.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309396329|gb|ADO73788.1| Tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] Length = 786 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 67/209 (32%), Gaps = 15/209 (7%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE- 141 KG + L G AA + A KM S +Q H V L + + + A Sbjct: 569 KGRRLLAEGQPDAAAEEMRKAIKMDSSRAQFH-------VELAKALMGKQGGEKEAAEAL 621 Query: 142 --KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQY 198 L M P + + R G L+ A +A+ P A+ Y Sbjct: 622 TTALRTMGDSP--KLVVMLG--NAYRRQGKLDDAITQYQRAVKDPKAKNPEARLAMGGIY 677 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 EW +A L + + + A+ L KGD + ++L +N Sbjct: 678 RERSEWEKAQEQLEKASQEFVGQSDRAALALTELGRVFQGKGDATKAEEAYQKALNADEN 737 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIW 287 A A +L K+ L + + Sbjct: 738 YSPAYYFYASALSKDRKQGDKVRALAQEY 766 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 117/341 (34%), Gaps = 44/341 (12%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL+ + A ++ AR + Q ++ +Y + Q +A +K + L Sbjct: 398 LTLGLVQMNAGDLEHAR--DNLEKAQSLSPDDPRIYASLGAVYRRLGQDAVAWQKYDFAL 455 Query: 148 --QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP-------DAPWVTEAVVQQY 198 + L + A K L P A + +++ Sbjct: 456 RYEKDHPESLLGKGLLILEQDEPNFEMASAMLKKLLVADPPPSPRQLAAAQLARSLLVSR 515 Query: 199 VLAK--------------------EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 V A + +A + + +++ ++ LL+ + Sbjct: 516 VSASMATLKPDVQAKLSEATGVPVDKEKARADMLKAEQDGFALDKANPELLLIKGRRLLA 575 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLI-SQNKKRKAEVILEKIWKV-NPHPE-- 294 +G A+ + +++K+ + + AK+L+ Q +++A L + P+ Sbjct: 576 EGQPDAAAEEMRKAIKMDSSRAQFHVELAKALMGKQGGEKEAAEALTTALRTMGDSPKLV 635 Query: 295 --IANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + N Y ++ + + +RA++ + ++ E+ + + I E ++A + A Sbjct: 636 VMLGNAYRRQGKLDDAITQYQRAVK--DPKAKNPEARLAMGGIYRERSEWEKAQEQLEKA 693 Query: 352 MKI--APRKEIFLLLAQIEQA--NSHNTDKILYWTQSALHA 388 + L L ++ + + K Q AL+A Sbjct: 694 SQEFVGQSDRAALALTELGRVFQGKGDATKAEEAYQKALNA 734 >gi|293414612|ref|ZP_06657261.1| yciM protein [Escherichia coli B185] gi|291434670|gb|EFF07643.1| yciM protein [Escherichia coli B185] Length = 389 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGNEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|262305027|gb|ACY45106.1| acetylglucosaminyl-transferase [Polyxenus fasciculatus] Length = 290 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVTDAEDCYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFSEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 34 GQVTDAEDCYNTALRLCPTHADSLNNL--ANIKREQGFSEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200 >gi|167841713|ref|ZP_02468397.1| TPR repeat protein [Burkholderia thailandensis MSMB43] Length = 546 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 49/178 (27%), Gaps = 10/178 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + LAR + + H L A ++ A + L + V Sbjct: 80 DDALARCERALAIEPR--HARALAN--RGNAASHLGRHGDAVDSYARALDVEP-DSVGVL 134 Query: 159 SLYFESCRIGDLNSAQRYA-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y + D + A +AL ++P P + + + + A+ L + Sbjct: 135 CNYASALMRVDRHRDAHRACDRALALAPHDPHASLTRARVRLETHRYDEALDDLTRAIAV 194 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A + R + +++ + + A A +S Sbjct: 195 AP----REKLAHFHRGNALRALRRHEEARQAYADAIDIDPDYAPAHCMRAFLCLSIGD 248 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 65/234 (27%), Gaps = 11/234 (4%) Query: 129 IALAERQYNIAHEKL-EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A ++ A + + P + + + + + D A A+ SP Sbjct: 4 ALRALGRFGDAADSYGHALALTPGSADVLFLRGVAY--LDLHDPERALADFNAAIAASPG 61 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + A+ + A E RA+ + + G + Sbjct: 62 FVDAIFNSSIALDQLGRYDDALARCERAL--AIEPRHARALANRGNAASHL--GRHGDAV 117 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLL 303 +L + +S+ A +L+ ++ R A ++ + PH + L Sbjct: 118 DSYARALDVEPDSVGVLCNYASALMRVDRHRDAHRACDRALALAPHDPHASLTRARVRLE 177 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L R + + + ++A A+ I P Sbjct: 178 THRYDEALDDLTRAIAVAPREKLAHFHRGNALRALRRHEEARQAYADAIDIDPD 231 Score = 38.4 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 23/186 (12%), Positives = 61/186 (32%), Gaps = 9/186 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 ++G + A +AL I P A+ + + Sbjct: 75 QLGRYDDALARCERALAIEPRHARALANRGNAASHLGRHGDAVDSYARALDVEPDS---- 130 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L + ++ +L L + AS+ A+ + ++ +A L + Sbjct: 131 VGVLCNYASALMRVDRHRDAHRACDRALALAPHDPHASLTRARVRLETHRYDEALDDLTR 190 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSI 341 V P ++A+ + + + + + A + I+ + + + + + L +G Sbjct: 191 AIAVAPREKLAH-FHRGNALRALRRHEEARQAYADAIDIDPDYAPAHCMRAFLCLSIGDF 249 Query: 342 DQAHAK 347 + A+ Sbjct: 250 EAGWAE 255 >gi|89057722|ref|YP_512176.1| tetratricopeptide TPR_2 [Jannaschia sp. CCS1] gi|88866276|gb|ABD57152.1| Tetratricopeptide TPR_2 [Jannaschia sp. CCS1] Length = 824 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 101/309 (32%), Gaps = 33/309 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 AR++ ++Q+ V L + + AL + + A +++ L+I T Sbjct: 149 EDEPARRLVVDAARQYLDEAPENVSLRRIVIDAALRDGELEAALTEVDAALEIAPTDRQL 208 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--K 214 ++ + + +D+ P+ + +++ Y L + A +FL Sbjct: 209 YDGKLQILAQLERADEIEALLENMVDLFPEDEDLPGTLLRFYALQGDMEAAQSFLTNIVA 268 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ R+ L+ +L+ G +A I + A Q Sbjct: 269 TTDSDLQRRSARSALVQLALQVDGPGAALAELDRIIAETDDDLSFRT---LRAGIRFDQG 325 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--------------- 319 ++ +A LE + + E V ++ A L Sbjct: 326 EQSEAIADLETLLEGQ----------ESGEEVNVIRVTLARMLTTTGNVVGARALVEEIL 375 Query: 320 -INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + ++L + + +E + D+A A A+ P + LLL+ A + + Sbjct: 376 VADPSQADALKMKAAWLIEEDNGDEAIALLRTALDQDPNDSVALLLSADAHARNGDHSLA 435 Query: 379 LYWTQSALH 387 + A+ Sbjct: 436 REFLSLAVD 444 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Query: 270 LISQNKKRKAEVILEKIWKVN-PHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVE 326 LI + +A V +++ N H + + L +++ G + LRL E VE Sbjct: 39 LIEEGDFERAGVEFRNVFQNNGQHRDARARFAQLLRETDDMQGSYSQYLRLVEQYPGDVE 98 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++++A+++ + ++A + A ++A Sbjct: 99 GRIALAEMAIDLQNWEEARRHGIRARELA 127 >gi|86156666|ref|YP_463451.1| hypothetical protein Adeh_0237 [Anaeromyxobacter dehalogenans 2CP-C] gi|85773177|gb|ABC80014.1| tetratricopeptide protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 1256 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 94/286 (32%), Gaps = 18/286 (6%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L L + ++ R L + A + + +++E L Sbjct: 327 LARVLAARQGGDVQERRAAAEARRAALLAPGWADAQL---EAAALDEDHGRRRQRIEAAL 383 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 A+ +L E G +A R +A+ +P + A A Sbjct: 384 AAAPEDPRALRALGQEELDQGRPQAAARLLERAVRAAPGWAAPRVELADALSRAG--LEA 441 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 L + A A+ ARS + + A+ + +L+ D A++ A Sbjct: 442 RGALLAEATAAAFATVPSAVRAAARSARRLGRTEEAAARSRTLVALRFDDAQTRAAL--A 499 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEI 320 + L + A+ +LE+ +++P +++Y L + + R + Sbjct: 500 QILADRGDVAGAQALLEEALRLDP----SDVYQRLRLADLLAASGRGEEAERAYAAALAL 555 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + ++ + L G + A A A+++ P+ LL + Sbjct: 556 APDEPDAWERRGRARLSQGRVKDAQADLQRALELRPQSPELKLLVR 601 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 12/188 (6%) Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 +A ++ L ++ R + A E R L A E D+G A+ Sbjct: 359 ADAQLEAAALDEDHGRRRQRIEAALAAAPEDPR----ALRALGQEELDQGRPQAAARLLE 414 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENT 307 +++ + A +L + + ++ E P A + T Sbjct: 415 RAVRAAPGWAAPRVELADALSRAGLEARGALLAEATAAAFATVPSAVRAAARSARRLGRT 474 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFL 362 R+ L + + ++ +++I + G + A A A+++ P R + Sbjct: 475 EEAAARSRTLVALRFDDAQTRAALAQILADRGDVAGAQALLEEALRLDPSDVYQRLRLAD 534 Query: 363 LLAQIEQA 370 LLA + Sbjct: 535 LLAASGRG 542 >gi|296125573|ref|YP_003632825.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] gi|296017389|gb|ADG70626.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563] Length = 631 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 24/199 (12%) Query: 71 MLFHMLHKR---NYDKGY-----------KAL-YTGLMSIAAHNIPLA-RKMHSYVSQQH 114 L +R KGY +AL Y GL+++ +A + V + Sbjct: 163 TLGRFYMERNLPRLAKGYYERVLSLEESDEALFYVGLIALNEGFQSVAYDTLSKLVRRSK 222 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 + + +L I + + A E L T+ ++ L ++ D + + Sbjct: 223 GEYADKAATIL-GDIYVISGDTDSAIEMYLKSLVNSDTKPDSIRRLVKIYEQVEDYDGIK 281 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + + L+ +P+ A+ + Y + RAI K K++ ++ Sbjct: 282 KVYEQILEQNPNDIDTILALGELYEKENAYDRAIK-YYLKLTKMKDYTN------TYEAI 334 Query: 235 ENADKGDMIASYHDAIESL 253 S E+ Sbjct: 335 GLLANSYYKGSMLKEAEAN 353 >gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] Length = 279 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 4/151 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A Y A + +++ A F + A + KA+ I P Sbjct: 68 AYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKPKYA 127 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y + +A+ + +N ++ A R + + +D Sbjct: 128 QAFHGQGIAYTKLGNYEKALENFRKAIQNNPQY----AEAFNGRGIAYIQMEKYRQALND 183 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA 279 +++K N I A + Q KA Sbjct: 184 FDKAIKFNSNYIEAIYNKGIAYKQQGNSEKA 214 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 4/152 (2%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +Y A + E ++I A + ++G+ A KA+ +P Sbjct: 108 KYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQYAEAFNGR 167 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 Y+ +++ +A+ ++ K +N N + + + +G+ + + ++ Sbjct: 168 GIAYIQMEKYRQALNDFDKAIK----FNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQVIQ 223 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + A I K +KA EK Sbjct: 224 IDSDYLEAYIERGYVYGELGKYKKAIEDCEKA 255 >gi|158295621|ref|XP_316319.4| AGAP006254-PA [Anopheles gambiae str. PEST] gi|157016124|gb|EAA10760.4| AGAP006254-PA [Anopheles gambiae str. PEST] Length = 1120 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 102/303 (33%), Gaps = 31/303 (10%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNEYLV 122 L + H GY L L++ ++ A + + Q L Sbjct: 197 EALENYRHAVRLKPDFIDGYINLAAALVAAR--DMEQAVQAYVTALQYNPDLYCVRSDLG 254 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATK 179 LL+ + + A L+ TR A +L G++ A + K Sbjct: 255 NLLKA-----LGRLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHHFEK 306 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + P+ + A+ + RA+ + + N A++ + ++ Sbjct: 307 AVALDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQ 362 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 G + + ++ L N A A +L + + ++AE ++ P H + N Sbjct: 363 GLIDLAIDTYRRAIDLQHNFPDAYCNLANALKEKGQVKEAEESYNIALRLCPNHADSLNN 422 Query: 299 YTHLLSE----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ E +L LE E + ++ + + G +++A A++I Sbjct: 423 LANIKREQGYIEEATRLY-LKALEVF-PEFAAAHSNLASVLQQQGKLNEALLHYKEAIRI 480 Query: 355 APR 357 P Sbjct: 481 QPT 483 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 397 GQVKEAEESYNIALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 453 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 454 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 513 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 514 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 563 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A +A+D+ + P + Sbjct: 332 DRAVAAYLRALNLSPNNAVVHGNLACVYYEQGLIDLAIDTYRRAIDLQHNFPDAYCNLAN 391 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A N + N A L + ++G + + +++L++ Sbjct: 392 ALKEKGQVKEAEESYNIALRLCP----NHADSLNNLANIKREQGYIEEATRLYLKALEVF 447 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K +A + ++ ++ P A+ Y+++ + ++ G L Sbjct: 448 PEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FADAYSNMGNTLKEMQDVAGAL 505 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G+I +A A+K+ P Sbjct: 506 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTALKLKPD 551 >gi|307193762|gb|EFN76443.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit [Harpegnathos saltator] Length = 1180 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 108/372 (29%), Gaps = 70/372 (18%) Query: 67 SCPAMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ---HTFHNE 119 P L + H GY L L++ A ++ A + + Q Sbjct: 146 QLPEALENYRHAVRLKPDFIDGYINLAAALVA--AGDMEQAVQAYVTALQYNPDLYCVRS 203 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRY 176 L LL+ + + A L+ TR A +L G++ A + Sbjct: 204 DLGNLLKALA-----RLDEAKACY---LKAIETRPDFAVAWSNLGCVFNAQGEIWLAIHH 255 Query: 177 ATKALDISPDAPWV----TEAVVQQY---VLAKEWS-------RAITFLNQKKKNAKEWN 222 KA+ + P+ + + +W A + Sbjct: 256 FEKAVALDPNFLDAYINLGNVLKEARIFDSRRGDWDVAGVASADAEGQCLLGYRCLIPSR 315 Query: 223 RNRAILLIARSLE---NADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQN--- 274 ++ ++ + +A D + + +L L N+ A + A Q Sbjct: 316 GWESVSSGSQGSDVDNHARTIDCYRAVAAYLRALNLSPNN--AVVHGNLACVYYEQGVFG 373 Query: 275 ----KKRKAEV----------ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 + KA +K W + L + + +RA+ L Sbjct: 374 NRGFRTLKALKDSAHKIEEKGSRKKTWVE-------KLMLLELIDLAIDTYRRAIEL--- 423 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 ++ ++ E G + +A A+++ P + LA I++ + Sbjct: 424 QPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPTHADSLNNLANIKREQGFIEEATR 483 Query: 380 YWTQSALHAMPD 391 + AL P+ Sbjct: 484 LYL-KALEVFPE 494 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 442 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPEF-AAA 498 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 499 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 558 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 559 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 608 Score = 44.9 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 418 RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 473 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 474 EQGFIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 531 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 532 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 591 Query: 353 KIAPR 357 K+ P Sbjct: 592 KLKPD 596 >gi|182412280|ref|YP_001817346.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177839494|gb|ACB73746.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 1103 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 62/212 (29%), Gaps = 23/212 (10%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD A A L P + + A A L + A R Sbjct: 458 LHAGDYARALELARATLAKDPKDVDALVTMADLALEACNRPLATKLLQTLRGIAPLDPRL 517 Query: 225 RAIL---------------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +++ L+ + + A K D + ++L+L A + Sbjct: 518 QSLTADLTRGSYTPKLPQRLLNTARDLATKRDWKRAGVFVAKALELEPGLRGAYALFGRI 577 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-----ALRLEEINKES 324 ++A L + K + A+ + L + G+ R + + + Sbjct: 578 HSELGNYQEAADTLLQALKQE---DTADAWMGLGHILSKGRQNREAADAFRKALVLAPVA 634 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ V+ A+ +G + + P Sbjct: 635 IATIHAVADAAITIGDWKLHSDAVGMLRERDP 666 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 29/221 (13%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----I 149 + A + A ++ + + LV + +AL +A + L+ + Sbjct: 457 HLHAGDYARALELARATLAKDPKDVDALVTM--ADLALEACNRPLATKLLQTLRGIAPLD 514 Query: 150 PATREF---AVYSLYFESCRIGDLNSAQRYA------------TKALDISPDAPWVTEAV 194 P + Y LN+A+ A KAL++ P Sbjct: 515 PRLQSLTADLTRGSYTPKLPQRLLNTARDLATKRDWKRAGVFVAKALELEPGLRGAYALF 574 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + + A L Q K + + I + ++L Sbjct: 575 GRIHSELGNYQEAADTLLQALKQEDTADAWMGLGHILS-----KGRQNREAADAFRKALV 629 Query: 255 LCDNSIMASICAAKSLISQNK---KRKAEVILEKIWKVNPH 292 L +I A + I+ A +L + + PH Sbjct: 630 LAPVAIATIHAVADAAITIGDWKLHSDAVGMLRERDPLAPH 670 >gi|209550916|ref|YP_002282833.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536672|gb|ACI56607.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 622 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 22/205 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 ++PL R + + + + A E L + A + Sbjct: 386 DVPLRRILEMSARALALDPDLPEAHASHGLALHQSGFDDRAAAAFERALSLDPNLFEANF 445 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKEWSR-----A 207 G+ + +Y T+A I PD + + + + W+R A Sbjct: 446 HYARFFFMHGNFAESVQYFTRAAAIRPDDYVSPIHLMSAYRSLGRVLDTENWARLGLLRA 505 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 LN +N+ +R +L A GD + A ++ + + I+A A Sbjct: 506 ERALNLNPENSGPAHR--------GALALAHMGDTKRARDWAARAIAIDPDDIVAQYNLA 557 Query: 268 KSLISQNKKRKAEVILEKIWKVNPH 292 +A +LE ++ PH Sbjct: 558 CVYSVLGDIDQAIDLLE---RLLPH 579 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 71/221 (32%), Gaps = 25/221 (11%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+R KA+++ PD + ++W+ L + + + L A Sbjct: 351 ARRMFCKAVELDPDYARAYAGIADCDAAIRDWAPDDVPLRRILEMSARALALDPDLPEAH 410 Query: 233 S---LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + L G + +L L N A+ A+ ++ + + Sbjct: 411 ASHGLALHQSGFDDRAAAAFERALSLDPNLFEANFHYARFFFMHGNFAESVQYFTRAAAI 470 Query: 290 NP-------HPEIANIYT---HLLSENTVGKLK--RALRLEEINKESVESLVIVSKIALE 337 P H + + Y +L +L RA R +N E+ + Sbjct: 471 RPDDYVSPIH--LMSAYRSLGRVLDTENWARLGLLRAERALNLNPENSGPAHRGALALAH 528 Query: 338 MGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370 MG +A A A+ I P ++ +L I+QA Sbjct: 529 MGDTKRARDWAARAIAIDPDDIVAQYNLACVYSVLGDIDQA 569 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 79/281 (28%), Gaps = 28/281 (9%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-PWV 190 A + A T FA+ + KA+ P A Sbjct: 275 ANGDHLWAERY-----DRDLTDIFAIQDEITHAIVGQLKVRLLPEEKKAIATEPTANVEA 329 Query: 191 TEAVVQQYVLAKEWSR-----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++ L+ W++ A + + ++ R A + + D + Sbjct: 330 YTYYLRGRQLSHTWTKSYLQLARRMFCKAVELDPDYARAYAGIADCDAAIRDWAPDDVPL 389 Query: 246 Y---HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---Y 299 + +L L + A +L +A E+ ++ P + Y Sbjct: 390 RRILEMSARALALDPDLPEAHASHGLALHQSGFDDRAAAAFERALSLD--PNLFEANFHY 447 Query: 300 THL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS----IDQAHA---KAML 350 + N ++ R I + S + + +G + A +A Sbjct: 448 ARFFFMHGNFAESVQYFTRAAAIRPDDYVSPIHLMSAYRSLGRVLDTENWARLGLLRAER 507 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A+ + P + A+ +T + W A+ PD Sbjct: 508 ALNLNPENSGPAHRGALALAHMGDTKRARDWAARAIAIDPD 548 >gi|146337788|ref|YP_001202836.1| TPR repeat-containing UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Bradyrhizobium sp. ORS278] gi|146190594|emb|CAL74596.1| conserved hypothetical protein; putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase with TPR repeats [Bradyrhizobium sp. ORS278] Length = 713 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 53/172 (30%), Gaps = 11/172 (6%) Query: 93 MSIAAHNIPLAR------KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 + + ++ LA+ +H + Q + L + + A E Sbjct: 222 LHLGLGDVLLAQGVFNDAALHYRRACQLMPDDAEAARQL-GHALHQAGRASEAIEAYRRA 280 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + T + +L +G L +A AL + P + + Sbjct: 281 ALLDPTNVVLLSNLAACLYGLGQLEAALAACRNALALQPGYAPAHTNLGIIHERRGAMDE 340 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ + + R A L ++ GD+ A+ + +++ L + Sbjct: 341 AVAAHRRAIAADPSYARGHANL----AVALRHAGDIDAALAASHQAVALAPD 388 >gi|67527889|ref|XP_661796.1| hypothetical protein AN4192.2 [Aspergillus nidulans FGSC A4] gi|40740101|gb|EAA59291.1| hypothetical protein AN4192.2 [Aspergillus nidulans FGSC A4] gi|259481206|tpe|CBF74516.1| TPA: DnaJ and TPR domain protein (AFU_orthologue; AFUA_1G05900) [Aspergillus nidulans FGSC A4] Length = 634 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 82/253 (32%), Gaps = 40/253 (15%) Query: 126 EVQIALAERQY-NIAHEKLEMMLQIPA-------TREFAVYSLYFESCRIGDLNSAQRYA 177 E Q+ +A A + ML+ R A Y L G+ + A + Sbjct: 293 EAQLKMATGNSFGKAQDIAINMLRDNNQDPDALLIRAKAYYGL-------GETDQALKSL 345 Query: 178 TKALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNR 225 + + PD + + AK++ +AI + + Sbjct: 346 KMCIGLDPDHREAIKLLRMLQKLTRTKEEGNNAFKAKDYRKAIELYTEALSVDETNKDVN 405 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A +L R+ + + + D E+L+L I A AK+ ++A + Sbjct: 406 AKILQNRAQAYINLKEYDEAIKDCTEALRLDPTYIKAQKMRAKAHGGAGNWQEAVSDYKA 465 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + + NP + ++RA E+ K + + ++ + D Sbjct: 466 VAEANP-----------GEKGIREDIRRAEF--ELKKAQRKDYYKILGVSKDATETDLKK 512 Query: 346 AKAMLAMKIAPRK 358 A LA+K P K Sbjct: 513 AYRKLAIKYHPDK 525 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 32/186 (17%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++RAI + E N N +I R+ N + + + DA + +L + Sbjct: 149 KDGNYNRAIEEFTKAI----ELNPNNSIYRSNRAAANLAAHNYLDALEDAERADELDPGN 204 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 +++L + + +A +LE ++ P + + L Sbjct: 205 NKILHRLSRTLTALGRPAEALEVLE---RMQP------------PASAADRQNAEKMLRF 249 Query: 320 INKESVESLVIVSK---IALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSH 373 IN ++ +++ ++ + IDQA +K + LL AQ++ A + Sbjct: 250 IN----QAKETLAENRGASMAVFCIDQARQLLGPGVKEP---RAWTLLTAEAQLKMATGN 302 Query: 374 NTDKIL 379 + K Sbjct: 303 SFGKAQ 308 >gi|325921439|ref|ZP_08183295.1| PAS domain S-box [Xanthomonas gardneri ATCC 19865] gi|325548081|gb|EGD19079.1| PAS domain S-box [Xanthomonas gardneri ATCC 19865] Length = 644 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 16/202 (7%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P T V + S GD+ + A I P P V A ++ + A+ Sbjct: 60 RSLRAAPRTALLPVVHVSAASIATGDMATGLDAGADAYLIHPVDPSVLVATLRTLLRARN 119 Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 A+ + + + A L + + A+ DAI++ L Sbjct: 120 AEDALRISEARFREIFEHISAPIAVVDANLHTHEANAAFQRLIGSATPGDAIQAAGLDQA 179 Query: 258 ----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSENTVGKL 311 A A+ + + R + E W+V+P+ P++ + L+ + T +L Sbjct: 180 TTVHALTTALAQRARWSGTLSIIRDG-KLCETEWRVSPYREPDLGLL---LVEDVTEQRL 235 Query: 312 KRALRLEEINKESVESLVIVSK 333 + + +E++ + E +++ Sbjct: 236 REREQRQELDTATTELAHQIAE 257 >gi|262304959|gb|ACY45072.1| acetylglucosaminyl-transferase [Artemia salina] Length = 289 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 8/166 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 34 GMVQEAEDCYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + + + A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMGDINGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + + D G++ + +LKL + A Sbjct: 151 INPGF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPDFPDA 192 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A N + + A L + Sbjct: 10 KRAIELQPNFPDAYCNLANALKEKGMVQEAEDCYNTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMGDINGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIQSYKTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|255011350|ref|ZP_05283476.1| hypothetical protein Bfra3_19563 [Bacteroides fragilis 3_1_12] gi|313149164|ref|ZP_07811357.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12] gi|313137931|gb|EFR55291.1| TPR domain-containing protein [Bacteroides fragilis 3_1_12] Length = 320 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 82/231 (35%), Gaps = 10/231 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + A + L I + L + G+ A + + + P+ Sbjct: 38 AQRMGRPDYAIKCFNEALAIEE-DFETLNYLSQIYMQTGEFVKAHELLERMIALEPELTS 96 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + + +K A E A L+ ++ D G M ++ Sbjct: 97 TYLTLANLCFMQENYQEMADA--AQKAIALEEGNAMAHYLLGKANHGLDNGIMTIAHLT- 153 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 +++ L D+ A + A++L + +A +E I NP E A + + G Sbjct: 154 -KAIVLKDDFTEARLLRAEALYKMQQFAEAMEDIEAILAQNPDEE-AALLLRGKIKEATG 211 Query: 310 KLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 K + A + E+N + ++ + + ++ + + A A+ + P Sbjct: 212 KQEEAENDYLSVTEMNPFNEQAYLYLGQLFITQKKLSAAIELFDEAIDLNP 262 >gi|193659732|ref|XP_001943461.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Acyrthosiphon pisum] Length = 1185 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 79/259 (30%), Gaps = 16/259 (6%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + + V L L A E L Sbjct: 166 LGKACIAFNRKDYRGALAYYKKAL-RSNPQCPADVRLGMAHCFLKLGNIEKARLAFERAL 224 Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 Q+ + A+ L GD+ +KA I P V + + K++ Sbjct: 225 QLDSKCVGALVGLAIMKLNGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDY 284 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS 263 +++ L + E RA + + + ++ ++ + ++ Sbjct: 285 TKS-ELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYYQATQFAPVTFVLPH 343 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHLLSENTVGKLK-RAL 315 + I A EK+ K HP + ++Y ++ K Sbjct: 344 YGLGQMYIYGGDMENAAQCFEKVLKA--HPGNYEAMKILGSLYADSKNQQKRDIAKSHLK 401 Query: 316 RLEEINKESVESLVIVSKI 334 ++ E + VE+ V +++I Sbjct: 402 KVTEHFPDDVEAWVELAQI 420 >gi|196000955|ref|XP_002110345.1| hypothetical protein TRIADDRAFT_21924 [Trichoplax adhaerens] gi|190586296|gb|EDV26349.1| hypothetical protein TRIADDRAFT_21924 [Trichoplax adhaerens] Length = 360 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 8/156 (5%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA--LDISPDAPW 189 +++++ A + + LQ+ + +A L E IG+L+ +Q+ A D W Sbjct: 117 LQKEHDDAIKFFQRALQVDPSFAYAYTLLGHEYSLIGELDKSQKLFKDAVYADSRHYHAW 176 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ +W+ K A N + +ILL L + + Sbjct: 177 YGMGMIYYKQEKFDWAEVR------FKQAFAINPSSSILLCHIGLAQHAQNRSDEALTTM 230 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++KL N+I+ A L + + KA LEK Sbjct: 231 ESAIKLDPNNILCQYHHAAMLYAIGEYEKALSGLEK 266 >gi|108759977|ref|YP_631572.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622] gi|108463857|gb|ABF89042.1| putative adventurous gliding protein T [Myxococcus xanthus DK 1622] Length = 499 Score = 46.1 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 76/246 (30%), Gaps = 22/246 (8%) Query: 126 EVQIALAE-------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 Q A A + A + E ++ A ++L + R G + A+ Sbjct: 73 SAQSAFAAALQSYEAGDLDGARKGFEAVVDELPQSLNAQFNLGVIAERQGRPDDARVAYE 132 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 K L + P + Y AI + K A LL + S+ Sbjct: 133 KVLLLDPAHVPAVVNLGVMYRAQGRLDEAIALFQRALKT--PGREYDASLLNSLSITYRV 190 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---- 294 G + S A L + A A ++ K R AE++ H E Sbjct: 191 AGKLDESEAAARRVLVRNKDDPGAYKNLAHVAYAREKYRLAELL---AGTARKHSENDPA 247 Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + +Y L ++ L + + ++ + + + +AL A Sbjct: 248 LYNLLGMVYLKL--DDRARALVQFQKAISLDAKFTPGYLNLGALALSYRDYVGAERSFGK 305 Query: 351 AMKIAP 356 A+++ P Sbjct: 306 AVELEP 311 >gi|261195899|ref|XP_002624353.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis SLH14081] gi|239587486|gb|EEQ70129.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis SLH14081] gi|239614438|gb|EEQ91425.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis ER-3] gi|327351448|gb|EGE80305.1| peptidyl-prolyl cis-trans isomerase Cpr7 [Ajellomyces dermatitidis ATCC 18188] Length = 373 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 61/163 (37%), Gaps = 19/163 (11%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDA 187 A ++ +K + + L Y E+ A + + ++ Sbjct: 226 AFKAGNVDLGLDKYQK----------GLRYLNEYPEASDSDPPELAAQMTQLRFTLHSNS 275 Query: 188 PWVTEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++++ + W+ A+ K NAK+ + +A A +L D + Sbjct: 276 ALLAN-KLRRFEDGRSWAGFALET--AKAANAKDAEKAKAYYRRAVALVGLK--DDEEAL 330 Query: 247 HDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIWK 288 D E+ KL + + A+ + +++RK + +L+K +K Sbjct: 331 KDLAEAAKLAPGDVAIANERARVKKAIADQQRKEKEMLKKFFK 373 >gi|261408185|ref|YP_003244426.1| tetratricopeptide repeat-containing protein [Paenibacillus sp. Y412MC10] gi|261284648|gb|ACX66619.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. Y412MC10] Length = 1112 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 79/278 (28%), Gaps = 34/278 (12%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIA-------- 139 +++ A + + + L + Q+ Sbjct: 425 IAVFAADGRELVAYQPKLRTLERTPDPATAIGKPEDLKNTEALFLAGQHLEQYRHATYEP 484 Query: 140 HEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALD------ISPDAPWVT 191 L+ R Y L R G ++ Y KA++ P Sbjct: 485 EAYYVEGLRRDAGDARLNNAYGLLL--LRRGCFTQSEVYFKKAIETLTRHNARPYDSEPF 542 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + A +L + + + +A + +K + ++ Sbjct: 543 YHLGKALKWQGRLDEACAYLYKSVWSGA----WQGAGYLALAQIACEKQEYEEAFELMER 598 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSEN 306 SL + A + L + A LE+ K++P E+A +Y L E+ Sbjct: 599 SLAAQYRNYKARHLKSFVLRKLGRLADAASWLEETLKLDPMDAGAMNELAAVYQELKQED 658 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + L ++ +++ + +++ + G A Sbjct: 659 KSRHV--YESLAQLLRDNPHHYIAIAQDYADAGQYGDA 694 >gi|152990735|ref|YP_001356457.1| hypothetical protein NIS_0990 [Nitratiruptor sp. SB155-2] gi|151422596|dbj|BAF70100.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 418 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 8/160 (5%) Query: 128 QIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A E + A E + ++ +R F + ++ R + A +YA K L + P Sbjct: 37 QTAFLESNGYFAPAASMYEKLYKMTGSRLFLIKTI-ENYYRAKQFDKALQYARKGLKLYP 95 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P E Y+ K+ +A ++ + K K + + + + Sbjct: 96 KEPRFYELAAVLYIQKKDLIQAEKYVKEAIKLKKSPQNYELL-----ASIYLTQKRYELA 150 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + L ++ S A KKR+A LE Sbjct: 151 LKYYKSAYALKPSATTLSTMAYIMYFYLGKKREAIAYLET 190 >gi|148258470|ref|YP_001243055.1| hypothetical protein BBta_7275 [Bradyrhizobium sp. BTAi1] gi|146410643|gb|ABQ39149.1| hypothetical protein BBta_7275 [Bradyrhizobium sp. BTAi1] Length = 385 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 99/293 (33%), Gaps = 15/293 (5%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEM-MLQI 149 M+ LA ++ +Q ++ +LL + A E + A + ++ I Sbjct: 1 MAKDRGEFELAIRLFDNALKQGILEDKQRGFLLYSRGASYESLGLRDRALADFDAAIVLI 60 Query: 150 PATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P +Y LY G+ A + ++P P + Y + +A Sbjct: 61 PE--FPNLY-LYRGVIWGDKGEYQRALQDFLTVSRLTPTDPLAFNNLGNVYDRLGDLDQA 117 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I ++ ++ A R+ A K + + D +++ L A + A Sbjct: 118 IVNFDRAIGLRADY----AQAYYNRAHTYALKQERERAIADYDQAISLQPLFSDAYVNRA 173 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKES 324 + + A L+ ++NP A +L E L ++ + Sbjct: 174 VLHLMLRNFKAALSDLDTAIRINPKDVTALTNRATINLTMERYENALTDFDSALLLHPGN 233 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + ++ L G++D A A A ++ P ++ A I + + D+ Sbjct: 234 AAIFLGRGRVHLIAGALDSAIADFKTAARLRPNNPYPIIWAHIARVHKGEDDR 286 >gi|148255708|ref|YP_001240293.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1] gi|146407881|gb|ABQ36387.1| putative TPR repeat protein [Bradyrhizobium sp. BTAi1] Length = 1406 Score = 45.7 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 80/236 (33%), Gaps = 13/236 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + N A ++L + A+ L L+ A+ +A+ ++ Sbjct: 789 ARKLQGRGDNNDAEAIFRLILAGQPRQFDALVGLGMICSGSSRLDEAKDCFQRAVAVNAK 848 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++ A + A+ + +L A ++ ++G + Sbjct: 849 SAEAHGSIGAVEASAGRYDAAVGHYETALSLSPNHPG----ILYAFAMVRQNQGMSEEAM 904 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301 +++ + A L + K +A K+ + +P H IAN+ Sbjct: 905 VLLRRAIENKPQHLDAHFALGNLLYTAGKDIEAAKCYLKVLEFSPEHAETHNNIANVLLR 964 Query: 302 -LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E + KRA + ++ + LE+ +++A + +LA+K+ P Sbjct: 965 QGHRERAIEHYKRA---IASRPDYGDAYGNLGNAYLELNRLEEAIEQNLLALKLKP 1017 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 93/286 (32%), Gaps = 26/286 (9%) Query: 86 KALYTGLMSI-----AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + L G +++ + A + + + LV L I + + A Sbjct: 779 QTLADGAVAVARKLQGRGDNNDAEAIFRLILAGQPRQFDALVGL--GMICSGSSRLDEAK 836 Query: 141 EKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + + + + E+ G ++A + AL +SP+ P + A Sbjct: 837 DCFQRAVAVNAKSAEAHGSIG-AVEA-SAGRYDAAVGHYETALSLSPNHPGILYAFAMVR 894 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ L + +N A + L A G I + ++ L+ Sbjct: 895 QNQGMSEEAMVLLRRAIENKP--QHLDAHFALGNLLYTA--GKDIEAAKCYLKVLEFSPE 950 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR-- 316 A L+ Q + +A ++ P+ + Y +L N +L R Sbjct: 951 HAETHNNIANVLLRQGHRERAIEHYKRAIASR--PDYGDAYGNL--GNAYLELNRLEEAI 1006 Query: 317 ----LE-EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L ++ E S + +G ++A A A+++AP Sbjct: 1007 EQNLLALKLKPERFGSYNNLGVAYQALGRFEEATAAFEKALELAPD 1052 >gi|268323384|emb|CBH36972.1| hypothetical protein BSM_04490 [uncultured archaeon] Length = 640 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 30/255 (11%), Positives = 77/255 (30%), Gaps = 22/255 (8%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A ++ ++I + A +L +G A +A+ I P Sbjct: 400 GRKEDAEKEWREAIRINSDSAEAHNNLGNSLYDLGRKEDAVEEYREAIRIKPHFAEAHYN 459 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A+ + + ++ A + L N G + + E++ Sbjct: 460 LGNLLNNMGRKEDAVEEYREAIRIKPDY--AEAHNNLGVLLNNV--GRKEDAAEEYREAI 515 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308 ++ + A I L +K AE + ++N H + + ++ + Sbjct: 516 RINHDFAEAHINLGNLLKDMGRKEDAEKEYREAIRINHDFTEAHINLGVLLNNVGRKEAA 575 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + R I + E+ + + + G ++A +A ++ Sbjct: 576 KREYREA--IRIKPDDAEAHANLGILLSKTGKKEEAKDALEVAKRLFES----------- 622 Query: 369 QANSHNTDKILYWTQ 383 + + W + Sbjct: 623 EGREEDVKGAEEWLK 637 >gi|262304989|gb|ACY45087.1| acetylglucosaminyl-transferase [Euperipatoides rowelli] Length = 287 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 34 GQVAEAEDCYNTALRLCPTHADSLNNL--ANIKREQGLTEDATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ ISP + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMQDIPGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDAYCNLAHCL 200 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + A L + Sbjct: 10 RRAIELQPNFPDAFCNLANALKEKGQVAEAEDCYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGLTEDATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIPGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|256831172|ref|YP_003159900.1| diguanylate cyclase with TPR repeats [Desulfomicrobium baculatum DSM 4028] gi|256580348|gb|ACU91484.1| diguanylate cyclase with TPR repeats [Desulfomicrobium baculatum DSM 4028] Length = 816 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 12/162 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLE---MMLQIP--- 150 + AR+ V H L+ L L E + A E M Sbjct: 656 GDPVAARQAFEQVLSIRPDHVYALIRLGLMA---EEEGDFERAWNLYEQVRAMSDGEHLA 712 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 AT A L + R D ++A+ Y +A+ +P + Y+ + Sbjct: 713 ATHNLAYRYLARLAFRRDDRDTAREYLHQAITANPQDAHSFHLLATIYLERGDDPEIAES 772 Query: 211 LNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASYHDAI 250 L ++ + K ++ ++ + A Sbjct: 773 LARQSVHLKTDSPAFWEVLITALEQQGKIEEANQTKIRAAAQ 814 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 14/144 (9%), Positives = 42/144 (29%), Gaps = 2/144 (1%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y A + + + +Y+ + GD +A++ + L I PD + Sbjct: 622 NKYAKARTIFQDLTGLHPEHIMPLYNFGCACLKDGDPVAARQAFEQVLSIRPDHVYALIR 681 Query: 194 VVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + ++ RA + + + + + + D + + Sbjct: 682 LGLMAEEEGDFERAWNLYEQVRAMSDGEHLAATHNLAYRYLARLAFRRDDRDTAREYLHQ 741 Query: 252 SLKLCDNSIMASICAAKSLISQNK 275 ++ + A + + Sbjct: 742 AITANPQDAHSFHLLATIYLERGD 765 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 31/220 (14%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G++ A KAL + ++ Y ++++A T ++ + Sbjct: 586 AQGEIYDAIAEYKKALTVDEGNLLARNSLGVCYARLNKYAKARTIF----QDLTGLHPEH 641 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + L GD +A+ + L + + + A I + E+ Sbjct: 642 IMPLYNFGCACLKDGDPVAARQAFEQVLSIRPDHVYALIRLGLMAEEEGD-------FER 694 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 W N+Y + + + L L ++++A D A Sbjct: 695 AW---------NLYEQVRAMSDGEHLAATHNLA---------YRYLARLAFRRDDRDTAR 736 Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQS 384 A+ P F LLA I + +I Sbjct: 737 EYLHQAITANPQDAHSFHLLATI-YLERGDDPEIAESLAR 775 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 12/154 (7%) Query: 67 SCPAMLFHMLHKR---NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 P + D Y + GLM+ + A ++ V + + Sbjct: 656 GDPVAARQAFEQVLSIRPDHVYALIRLGLMAEEEGDFERAWNLYEQVRAMSDGEHLAATH 715 Query: 124 LLE----VQIALAERQYNIAHEKL-EMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRY 176 L ++A + A E L + + P + ++Y E R D A+ Sbjct: 716 NLAYRYLARLAFRRDDRDTAREYLHQAITANPQDAHSFHLLATIYLE--RGDDPEIAESL 773 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A +++ + D+P E ++ + A Sbjct: 774 ARQSVHLKTDSPAFWEVLITALEQQGKIEEANQT 807 >gi|152982806|ref|YP_001353651.1| hypothetical protein mma_1961 [Janthinobacterium sp. Marseille] gi|151282883|gb|ABR91293.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 542 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 18/243 (7%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L QIA A+ + + P+ R + + R+G+L A++ KAL Sbjct: 242 LLAQIAEAQGNEEAVLDAFNKSYDVIPSARRSRLMG--DAAYRVGNLEQARQAFNKALTH 299 Query: 184 SPDA--PWVTEA--VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + + ++A + Q V + + A+ L+ ++ ++ A + A Sbjct: 300 TRGSLTAQASDALSLAQVQVDIGDAADALNVLSAAAQDHQDDPYFAARQATIAAQAFARL 359 Query: 240 GDMIASYHDAIESLKLCDNSIM--ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 GDM ++ + +L D ++ AK+ + + I+ K K + Sbjct: 360 GDMNSAQAAFASAKELADGIRADIHTLTLAKAAFCVGLEEEGARIVAKAIKADHENIRLV 419 Query: 298 IYTHLLSENTVGKLKRALRLEEINKES--VESLVIVSKIA--LEMGSIDQAHAKAMLAMK 353 + + ++T L E E E +IV + + G D++ AK A+ Sbjct: 420 AFARRVLQDTGN-----EALIEKVVEESISEGALIVEQATQLMRAGQFDESLAKLEEALT 474 Query: 354 IAP 356 P Sbjct: 475 ATP 477 >gi|298242698|ref|ZP_06966505.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM 44963] gi|297555752|gb|EFH89616.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM 44963] Length = 736 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 11/198 (5%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVY--SLYF 162 + + HN+ L +LL ++ ++ + A E+L + P T E +L Sbjct: 533 AEATLRDLLELHNDALNHLLLAELYSSQERNEEAEEELHQAEALNPTTDEQGSIEANLGA 592 Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + R + +A + +A + P+ P W V + + + K+A E Sbjct: 593 LAMRREQMATALAHFERASKLVPNHPGIWFNLGFVHRLLGH------METAASHYKHAIE 646 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + N ++ D + L +S A L ++R A+ Sbjct: 647 LEPQDIRPYSELTAINMNQQDQQEARRVVEAGLAANPDSAHLLALHASVLHVLGEERAAQ 706 Query: 281 VILEKIWKVNPHPEIANI 298 LE+ +++P EI Sbjct: 707 RQLEQAERLDPTLEIVQA 724 >gi|195440676|ref|XP_002068166.1| GK10384 [Drosophila willistoni] gi|194164251|gb|EDW79152.1| GK10384 [Drosophila willistoni] Length = 931 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 82/240 (34%), Gaps = 17/240 (7%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +LE ++ Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFNE--- 683 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + E++++ + + + QN+ A + K P I Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQNRTNDAAQTYTQGIKKCPT-SIPLWILSA 740 Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358 E G L +A LE + + ++ + L G + A A++ P Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVPILWLEAIRVELRAGLKEIASTMMARALQECPNA 800 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|74152076|dbj|BAE32070.1| unnamed protein product [Mus musculus] Length = 463 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 87/237 (36%), Gaps = 29/237 (12%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + + + P + L + +G+ A+ + +AL + +V + + Sbjct: 198 RKAVRLNPEDPYLKVL----LALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFR 253 Query: 200 LAKEWSRAITFLNQKKKNAKE-----------WNRNRAILLIARSLENADKGDMIASYHD 248 +A+ LN+ + + + + + L +R+ + + ++ Sbjct: 254 RKHRVDKALHLLNRALQASPSSGYLHYQKGLCYKQQISQLRTSRNRQPRRQDNVQELAQQ 313 Query: 249 AI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 AI E+LKL MA +C A+ ++ +AE +K + H+ Sbjct: 314 AIHEFQEALKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKALNNK------TLVAHIEQ 367 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + + R R + +K+S + + + L++ A K + A++ + + Sbjct: 368 DIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWRKLLTALEKVAERRVC 420 >gi|326406732|gb|ADZ63803.1| TPR repeat-containing protein, tetratricopeptide repeat family [Lactococcus lactis subsp. lactis CV56] Length = 418 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 65/198 (32%), Gaps = 23/198 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154 + A + + + + + L + + Y+ A + + + T+ Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAI 208 S+Y RIGD + A L+ S + E + + Y +RAI Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAI 223 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + +K E+ + +A + + A+ A + +K N++ A+K Sbjct: 224 ANFKRLEKMDVEFLKYE----LAYAQTLEANQEFEAALEMAKKGMKKNPNAVPLLHFASK 279 Query: 269 SLISQNKKRKAEVILEKI 286 K AE L Sbjct: 280 ISFKLKDKAAAERYLMDA 297 >gi|326402277|ref|YP_004282358.1| hypothetical protein ACMV_01290 [Acidiphilium multivorum AIU301] gi|325049138|dbj|BAJ79476.1| hypothetical protein ACMV_01290 [Acidiphilium multivorum AIU301] Length = 733 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 88/305 (28%), Gaps = 46/305 (15%) Query: 93 MSIAAHNIPL-ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQI 149 +++ A N ARK+ S+ +E L+ L Q A+ A E + Sbjct: 26 VALDAGNTRECARKLFQQASELAPSWDEPLIRL--AQSYRADGHVAEAKELYIQASIRNR 83 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-------------AVVQ 196 Y + + + D + A Y ++A D++P A ++ Sbjct: 84 WRIEPLLAYGIL--ALQSNDPHDAVGYLSRATDLNPTNHQAWHGLALALGALGLQGAALR 141 Query: 197 QYVLAKE-----------WSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIA 244 A ++ ++ +E AI L + +G Sbjct: 142 AMANAGNLAPDILHYAITYNELRDTVDHDLILQIREPKWTTAIELCLEANAALRRGGAEE 201 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299 + ++ + ++ + ++ AE+ L K P ++A Sbjct: 202 AIALLETAIDVEPDASDILALLGNAYLANQMPEMAELHLRKALLRAPENIDIANDLAVAL 261 Query: 300 THLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ---AHAKAMLAMKIA 355 + L + + S +++++ + + D A K Sbjct: 262 GRQYRFGDASDILNKLDI-----PANASSTILLNRATIRASAGDLAGSARDIKAATPKAN 316 Query: 356 PRKEI 360 R + Sbjct: 317 DRSRL 321 >gi|297798124|ref|XP_002866946.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp. lyrata] gi|297312782|gb|EFH43205.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp. lyrata] Length = 1043 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 17/211 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146 L G+ + N A + V ++ + E L+ +R+ A + + Sbjct: 292 LSRGIAQVNEGNYMKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 349 Query: 147 LQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 P AT + + G+ A TKAL P++P V +K+++ Sbjct: 350 QSNPAATEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 407 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ L+ K K+ L +A + G+ + ++S++L N + A + Sbjct: 408 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 463 Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289 A+ KA +E+ +WK Sbjct: 464 LAQFYQELADHCKALECIEQVLQVDNRVWKA 494 >gi|218781315|ref|YP_002432633.1| peptidase C14 caspase catalytic subunit p20 [Desulfatibacillum alkenivorans AK-01] gi|218762699|gb|ACL05165.1| peptidase C14 caspase catalytic subunit p20 [Desulfatibacillum alkenivorans AK-01] Length = 661 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 39/101 (38%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A + E + + + +L + GD++ A YA +AL +PD+P Sbjct: 225 TGSVSQARKTWEELAGDRSWDTVLLCNLGWLCLETGDVDQADHYAMQALAAAPDSPNAMA 284 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 ++ +++ A+ + ++ RA+ + Sbjct: 285 IRLEVLFARGQYTNAVQLVFANERQTTPRYEERAVAYAVVA 325 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 12/138 (8%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +LL + GD+ + H A+++L +S A + L ++ + A Sbjct: 242 RSWDTVLLCNLGWLCLETGDVDQADHYAMQALAAAPDSPNAMAIRLEVLFARGQYTNAVQ 301 Query: 282 ILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++ + P E A Y + + ++S+ S+ +++ + Sbjct: 302 LVFAN-ERQTTPRYEERAVAYAVVAGWKSFQ--------AGGGQDSLSSMESLAEEFPQA 352 Query: 339 GSIDQAHAKAMLAMKIAP 356 S QA A++ P Sbjct: 353 ESFSQAATTMKDALEGRP 370 >gi|327404353|ref|YP_004345191.1| hypothetical protein Fluta_2367 [Fluviicola taffensis DSM 16823] gi|327319861|gb|AEA44353.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola taffensis DSM 16823] Length = 322 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 26/154 (16%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--------RIGDLNSAQRYATKALDIS 184 ++ Y+ A + ++ + LY E+ +GD A + KAL+I Sbjct: 165 QKNYSKAITHFQTLISKDS--------LYKEAYNNLGFCYYSLGDNIKALKAINKALEID 216 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGD 241 P P + Q ++ ++ +A+ LN+ + + RA++ + + GD Sbjct: 217 PRYPEAYDKRSQVWMATGDYKKALEDLNKALSLYPFLSTSLNNRALIYLEMKQYSDALGD 276 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 M A K + + I A+ Sbjct: 277 MNLLLQTA----KPTADLL---IIRAQIYKEMGN 303 >gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21] gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium sp. AL-21] Length = 693 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 9/197 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G A KAL+++P+ + +++ AI + ++ E + N Sbjct: 347 LTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAILYCDRVL----EIDSN 402 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L ++ + S + ++ A S NK A V Sbjct: 403 QVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIGVSQEYLNKPEDALVSFN 462 Query: 285 KIWKVNPHPEIANIYTHLLS----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K ++ P I Y S LK + ++ E+ E+ + I +E G+ Sbjct: 463 KAIEIEPK-NIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGLINMEQGN 521 Query: 341 IDQAHAKAMLAMKIAPR 357 D+A + I+P Sbjct: 522 YDEALKNFDAVLNISPD 538 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 6/134 (4%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM-L 147 TGL+++ N A K V + + L+ + Q + A E E + L Sbjct: 512 TGLINMEQGNYDEALKNFDAVLNISPDNIDVLIN--KGQAYGFMDKPEKALEYFDEALDL 569 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + + +GD +++ + L++ P+ PW + Y E+ +A Sbjct: 570 ESDNVEALNYRGVAL--KHMGDHDASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYEKA 627 Query: 208 ITFLNQKKKNAKEW 221 I + ++ Sbjct: 628 IESFDNALDEDPKF 641 >gi|295676126|ref|YP_003604650.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002] gi|295435969|gb|ADG15139.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002] Length = 579 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 58/196 (29%), Gaps = 10/196 (5%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 M S + L + A E +L++ A+ L + Sbjct: 1 MSKQASLPQQLDH----LLRQAVALQQNGALVEAEEMYREILELKPKHGDALRWLGELAL 56 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G L KAL ++ P V + + A+ + ++ Sbjct: 57 QTGRLQEGVELLKKALALNARQPAVHSNLAYALNALQRHDEALACAERALVMQPKF--AD 114 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ +L + + + + +L L A A L + A ++ Sbjct: 115 ALNNRGNALASLHR--PLEALASYERALSLVPEFAPAWNNRACVLRDLGRYADALDSCDQ 172 Query: 286 IWKVNPHPEIANIYTH 301 + P+ A+ +++ Sbjct: 173 ALALQ--PDYADAWSN 186 >gi|295690571|ref|YP_003594264.1| TPR repeat-containing protein [Caulobacter segnis ATCC 21756] gi|295432474|gb|ADG11646.1| TPR repeat-containing protein [Caulobacter segnis ATCC 21756] Length = 638 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 37/225 (16%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +GD ++A +A+ ++P P + + Q + L E + A Q+ K+ + Sbjct: 55 IALGDGSAAIAALREAVALNPALPACWDMLEQLHRLRGELADA-DTAAQRLAGLKQLPQA 113 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + GD+ + + L+ S+ A A+ + + AE +L Sbjct: 114 IVV-----AQSLLADGDLEPAEEVLKDHLRAAGESVGALRLLARIRLERGALEDAEAVLA 168 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + + + E+ + + L+ A Sbjct: 169 A-------------------------------ILDQAPDYHEARFDYAMVLLQGQKHRLA 197 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 +A + AP FL L + + + ++ L A Sbjct: 198 RREAERLLIDAPDSRAFLKLYGVACLGLGDFEPVIDLYARLLAAP 242 >gi|218704807|ref|YP_002412326.1| tetratricopeptide repeat-containing protein [Escherichia coli UMN026] gi|293404822|ref|ZP_06648814.1| yciM protein [Escherichia coli FVEC1412] gi|293409672|ref|ZP_06653248.1| yciM protein [Escherichia coli B354] gi|298380463|ref|ZP_06990062.1| yciM protein [Escherichia coli FVEC1302] gi|300897339|ref|ZP_07115769.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] gi|218431904|emb|CAR12789.1| conserved hypothetical protein [Escherichia coli UMN026] gi|284921162|emb|CBG34228.1| tetratricopeptide repeat protein [Escherichia coli 042] gi|291427030|gb|EFF00057.1| yciM protein [Escherichia coli FVEC1412] gi|291470140|gb|EFF12624.1| yciM protein [Escherichia coli B354] gi|298277905|gb|EFI19419.1| yciM protein [Escherichia coli FVEC1302] gi|300358889|gb|EFJ74759.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] gi|323964620|gb|EGB60093.1| TPR repeat-containing protein [Escherichia coli M863] gi|327253975|gb|EGE65604.1| tetratricopeptide repeat family protein [Escherichia coli STEC_7v] Length = 389 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 62/281 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361 + L + I +A + A ++ P +F Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318 >gi|15644443|ref|NP_229495.1| hypothetical protein TM1695 [Thermotoga maritima MSB8] gi|4982272|gb|AAD36762.1|AE001810_1 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 357 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 9/158 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286 L +LE AD+ ++ L + +N A L+ Q K + L+K Sbjct: 100 LYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLDKAVE 159 Query: 287 ---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 W V + + Y +L + + R E N + ++++ EM D Sbjct: 160 IDPWLVQAYASLGEAYYNL--GDYEKAIHYWERELEYNPNDKITYFMITEAYYEMNRKDL 217 Query: 344 AHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 A ++I P L+Q+ + N +K Sbjct: 218 AVKTLERLLEIDPDNIPALYQLSQLYR-ELGNEEKARE 254 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 83/246 (33%), Gaps = 36/246 (14%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD--ISPD-APW 189 E + + E M + + E L + I P+ W Sbjct: 33 EGDWELLK---EDMKKKEN--------IMKEVQTCEKLEKVVHLDETVYEPLIFPEFQEW 81 Query: 190 VTEAV-----VQQYVLAKEWSRAITFLNQKKKNAK--------EWNRNRAILLIARSLEN 236 + E + L + A+ + ++ + + + N A + Sbjct: 82 LREENITPKDFKNVSLKGLYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLL 141 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294 ++G + +++++ + A ++ + KA E+ + NP+ + Sbjct: 142 VEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPN-DKI 200 Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 I Y + ++ +K RL EI+ +++ +L +S++ E+G+ ++A Sbjct: 201 TYFMITEAYYEMNRKDLA--VKTLERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEEK 258 Query: 351 AMKIAP 356 M P Sbjct: 259 IMNCKP 264 >gi|322417874|ref|YP_004197097.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320124261|gb|ADW11821.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 639 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 78/264 (29%), Gaps = 37/264 (14%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 LA A E LQ Y L R GDL A R ++L + P Sbjct: 312 AQLAAGHDAEAIAAYEDALQKKEDSSRVRYHLGMLYERKGDLEEAVRNFAESLRLDPVNG 371 Query: 189 WVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNR-----------NRAILLIARS 233 + Y L + A + ++ N + R A+ ++ Sbjct: 372 DARRRLADIYALRGDLPLAVGEYRELITRQADNPLNYLRLARLLEKQRNYREAVTAYDKA 431 Query: 234 LE---------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 L + + E LKL + A + Q + Sbjct: 432 LSLDPANSEAHRSIGFLHLHLKQPEQAEKHLQEVLKLDQRNSQARDTLISIYVKQKRYGD 491 Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 +LE+ K+NP + +Y E+ + ++ ++ +L + K Sbjct: 492 TTTLLEEDAKLNPESADSQYRLGVMYA-FKREDEKAR-QQFDAALQLRPNHARALNALGK 549 Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357 + L+ G ++A A K P Sbjct: 550 LYLKQGDREKARETFAAAKKADPD 573 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 73/238 (30%), Gaps = 11/238 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDIS 184 Q+ + + A ++ + + T A L + G+ A L Sbjct: 242 AQLLELMGKRDEAEKEY-ALTGVQRT-VTAADHLKRAAKYEDAGEYALAAAEYAALLVKD 299 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P V E + + A + AI + ++ +R R L + KGD+ Sbjct: 300 PQMGGVREKLGDAQLAAGHDAEAIAAYEDALQKKEDSSRVRYHL----GMLYERKGDLEE 355 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---VILEKIWKVNPHPEIANIYTH 301 + + ESL+L + A A + A L NP + Sbjct: 356 AVRNFAESLRLDPVNGDARRRLADIYALRGDLPLAVGEYRELITRQADNPLNYLRLARLL 415 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 N + + ++ + E+ + + L + +QA +K+ R Sbjct: 416 EKQRNYREAVTAYDKALSLDPANSEAHRSIGFLHLHLKQPEQAEKHLQEVLKLDQRNS 473 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 56/213 (26%), Gaps = 40/213 (18%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 R AL G + +A + + L YL ++ +R Y Sbjct: 372 DARRRLADIYAL-RGDLPLAVGEYRELITRQA---------DNPLNYLRLARLLEKQRNY 421 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A + L + A S+ F + A+++ + L + + ++ Sbjct: 422 REAVTAYDKALSLDPANSEAHRSIGFLHLHLKQPEQAEKHLQEVLKLDQRNSQARDTLIS 481 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEW------------------------------NRNRA 226 YV K + T L + K E N A Sbjct: 482 IYVKQKRYGDTTTLLEEDAKLNPESADSQYRLGVMYAFKREDEKARQQFDAALQLRPNHA 541 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 L A +GD + + K + Sbjct: 542 RALNALGKLYLKQGDREKARETFAAAKKADPDL 574 >gi|258405687|ref|YP_003198429.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797914|gb|ACV68851.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense DSM 5692] Length = 339 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 53/183 (28%), Gaps = 15/183 (8%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R ++L + ++ + D LK ++ A+ + ++Q KA Sbjct: 30 TRFDSVLTSYQGQRYLEEHEYALGVEDLSHRLKQQPDNGAAAYWLGRLYLAQEHPSKALP 89 Query: 282 ILEKIWKVNPHPEIANIYTHLLS----ENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L+K ++ P A+ + + + +L L + + ++ V + ++ Sbjct: 90 ALQKAVELKPQYADAHFWLGVAHWAMMDFEKERLAYERALA-LEPDHTQARVYLGHHYVD 148 Query: 338 MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQ---------SALH 387 A + P A+ + W AL Sbjct: 149 REQWSLALIHYRRVLDEEPGHPSALFYTAECLEQLGREQSARQAWKAYLDRYPDGGRALE 208 Query: 388 AMP 390 A Sbjct: 209 ATR 211 >gi|167561490|ref|ZP_02354406.1| TPR domain protein [Burkholderia oklahomensis EO147] Length = 606 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 109/336 (32%), Gaps = 58/336 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 51 DAPQATFAPTLPEEQKDLPNVALTSQIVYQVLAAEVALQRNLPAPAYQTYLALARDTRDP 110 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP A V A++ VL + + A L Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWREYSPSSPRAAQVDAALL---VLGGKPADAQPML 167 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 Q+ A NR AI+ + A + + Sbjct: 168 AQELARATGENRGEAIIALQALLSRGPNRVGGLTVLQDLLKNDMNRPEARLAIARQQLAT 227 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L+L + + A++ L +A ++ V +P+ Sbjct: 228 DDKGGATQSLKEALRLKPDYLPAALM----LSQMGPNERAAGVVSFEKFVQQNPKSRDGR 283 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 284 LALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVKV 343 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 A +K + ++ LAQI +++ W Sbjct: 344 AQKKPGADVGQAYVYLAQIALDQNNDALAAQ-WLDK 378 Score = 37.6 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 78/243 (32%), Gaps = 45/243 (18%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q+ LA+ + + A ++ E M + ++ + +L + L+ A Y + + Sbjct: 283 RLALAQLYLADDRLDDAQKQFEAMRRNDSSDPTPLMALALIKIQQKHLDDASTYLKQYVK 342 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++ +KK + + L + D+ + Sbjct: 343 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNND 369 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----- 297 + + + + A + A+ L Q K +A +L + +P + A Sbjct: 370 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKAEEARKLLANLQVSDP-RDAAVIARTD 428 Query: 298 ---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++T + +L +A E + + + ++G + L M+ Sbjct: 429 ASILFTSKRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRA 485 Query: 355 APR 357 P Sbjct: 486 QPD 488 >gi|86358301|ref|YP_470193.1| putative exported protein, TonB-dependent receptor protein [Rhizobium etli CFN 42] gi|86282403|gb|ABC91466.1| putative exported protein, TonB-dependent receptor protein [Rhizobium etli CFN 42] Length = 1239 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 78/263 (29%), Gaps = 16/263 (6%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAERQYNIAHEKLEM 145 A+ + +IP A ++ +Q+ L Q E +E Sbjct: 348 AIAKAYTAGFLKDIPAAIEVLKQAEKQYPDDATLPARRALLAQ---LIDDPAQMKEAVER 404 Query: 146 MLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L I + + Y ES GD A +++L P + + Sbjct: 405 SLSIDPRDPDGLQARARYRESY-EGDTKGALADLSRSLADMPGSSMNWNDLGLLQSDRG- 462 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A A E + ++ D+ M + + +L + + +A Sbjct: 463 ---ANGEAEAAFLKAIELDPEDPAPHANLAILYLDQSRMKEAKREIDTALAVDPSFDIAL 519 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEI 320 + + + + KA L NP ++ HL + + + + + Sbjct: 520 LARGRYYLQNGETDKALDDLLAASTANPGYSAAQLGLAIAHLEKGDRLPSNQAVDNADRL 579 Query: 321 NKESVESLVIVSKIALEMGSIDQ 343 +K + + A+++ D Sbjct: 580 DKNDP--AISAFRTAVDIDDYDA 600 >gi|85092996|ref|XP_959606.1| hypothetical protein NCU02424 [Neurospora crassa OR74A] gi|28921050|gb|EAA30370.1| hypothetical protein NCU02424 [Neurospora crassa OR74A] Length = 517 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 1/173 (0%) Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L LL Q L++ + + A + + + + +G + A Sbjct: 29 PLSNLLASAQSHLSKGETSDALVYYDAAIARDPSNYLTFFKRATTYLSLGRTSQATDDFN 88 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 K L + P + + + +W A + KK + A + + A Sbjct: 89 KVLALKPGFEGAHIQLGKLKARSADWDAAREHYEKAKKVNELVALEGAADAAGLAEKAAA 148 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 GD A ++ + + ++ +K L + L+ I ++ P Sbjct: 149 SGDWEECVTQAGAAIMVANRAVALRQLRSKCLFERGDLEMGMSDLQHILQMKP 201 >gi|328950837|ref|YP_004368172.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] gi|328451161|gb|AEB12062.1| Tetratricopeptide TPR_2 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] Length = 362 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 95/270 (35%), Gaps = 21/270 (7%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAP 188 QY+ A + +++ A+Y L R+ +SA A+ + +P Sbjct: 47 AGQYDAALIAFKRAVELDEKNVEALYGLARAQLRLRLFSSAVENLKAAISLDASYTPAYV 106 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIAS 245 + +A QY+ A++ A L+Q + R + R L KGD + Sbjct: 107 ALAQAYTDQYINARDREAARALLDQALLVLNDAERINPEYYAIYNQRGLIYQYKGDPEKA 166 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++L + + + A + +S + +A +L++ V P + Y Sbjct: 167 AEAFEKALSINNEDPIVLYNLALTNLSLGRLDEALSLLKRAVAVAPQ----DSYVRARYG 222 Query: 306 NTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + R + ++ + + + ++ + ++A A A++ P + Sbjct: 223 ALLAVKGRLDDALFELEQAVRLDPTNALAWSYLGQVRFQRKEYEEALAALSRAVERDPSR 282 Query: 359 --EIFLLLAQIEQANSHNTDKILYWTQSAL 386 E + L ++ ++ Y A+ Sbjct: 283 YPEAYFYLGRV-YMERGEYEEARYNLSKAV 311 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 80/261 (30%), Gaps = 15/261 (5%) Query: 84 GYKALYTGLM--SIAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQY 136 Y AL I A + AR + + Y +Y I + Sbjct: 104 AYVALAQAYTDQYINARDREAARALLDQALLVLNDAERINPEYYAIYNQRGLIYQYKGDP 163 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E E L I +Y+L + +G L+ A +A+ ++P +V Sbjct: 164 EKAAEAFEKALSINNEDPIVLYNLALTNLSLGRLDEALSLLKRAVAVAPQDSYVRARYGA 223 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A+ L Q + A+ + + + +++ Sbjct: 224 LLAVKGRLDDALFELEQAVRLDPT----NALAWSYLGQVRFQRKEYEEALAALSRAVERD 279 Query: 257 DNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLK 312 + + + + + + +A L K ++P + +E + G Sbjct: 280 PSRYPEAYFYLGRVYMERGEYEEARYNLSKAVVLDPANAEYRYWLGHANEKLGDMEGAAA 339 Query: 313 RALRLEEINKESVESLVIVSK 333 + + E+ + E+ +++ Sbjct: 340 QYKKAIELRPDYPEAREGLAR 360 >gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489] gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema succinifaciens DSM 2489] Length = 887 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 98/322 (30%), Gaps = 79/322 (24%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A+ R + A + +L+ + SL + GD A Y ++ + I Sbjct: 14 RANAAILSRDFEQAARIYKGLLKSDPQNIELLSSLGNLYVKSGDDEKALAYFSEIIRIDS 73 Query: 186 DAPWV----------------TEAVVQQYVLA------------------KEWSRAITFL 211 + +V++Q V++ ++ A+ Sbjct: 74 KNVEALNSLGGIYRRLKKYDDSISVLEQAVISDESNVQSFYNLGFTFKLMGKYDDALNCF 133 Query: 212 NQKKKNAKE---------------WNRNRAI---------------LLIARSLENADKGD 241 N+ + E A+ L + + G+ Sbjct: 134 NRVVEENPEDVLAFNHIGSIYALKNQNKDAVSSYLRGLKIDPNHPILHLNLAKSYDALGE 193 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIA 296 + + +LK + A A L+ +NK R A ++ +NP H ++ Sbjct: 194 FEKAQAEYEAALKTKPGWLEAIENYADLLLKKNKTRNAGELVRHALNLNPKDAAMHTKLG 253 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++YT S+ +++ L +I E ++L ++ G + A +P Sbjct: 254 DVYTK-QSDFDNAEVEYNEAL-KIRPEFPKALSGLASAYESTGRNEDALEIMGRMENASP 311 Query: 357 --------RKEIFLLLAQIEQA 370 I L +IE+A Sbjct: 312 EDSSMLCQYAHILLSADRIEEA 333 >gi|312071553|ref|XP_003138661.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase [Loa loa] gi|307766175|gb|EFO25409.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase [Loa loa] Length = 1205 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 55/179 (30%), Gaps = 20/179 (11%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L E+ +A KAL + P + + A + + Sbjct: 484 GLVSEA------EAAYN---KALQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIY 534 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E+ A + +G + + + E++++ A +L Sbjct: 535 PEF----AAAHSNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGG 590 Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A + ++NP H +A+I H S N ++ ++ + ++ ++ Sbjct: 591 ALQCYTRAIQINPGFADAHSNLASI--HKDSGNVPEAIQSYSTALKLKPDFPDAFCNLA 647 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 11/226 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A L + +L G ++ A KA+D+ P+ P + Sbjct: 419 DRAVAAYLRALNLAGNHAVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLAN 478 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 S A N+ + ++ L + ++G + + +++L++ Sbjct: 479 ALKEKGLVSEAEAAYNKALQLCPTHADSQNNL----ANIKREQGKIEDATRLYLKALEIY 534 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKL 311 A A L Q K + A ++ ++ P A+ Y+++ + + G L Sbjct: 535 PEFAAAHSNLASILQQQGKLQDAINHYKEAIRIAPT--FADAYSNMGNTLKEMGDVGGAL 592 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + R +IN ++ ++ I + G++ +A A+K+ P Sbjct: 593 QCYTRAIQINPGFADAHSNLASIHKDSGNVPEAIQSYSTALKLKPD 638 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 13/227 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G++ A + KA+ + P+ + A+ + RA+ + A N Sbjct: 380 AQGEIWLAIHHFEKAVQLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLAG----NH 435 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A++ + ++G + + +++ L N A A +L + +AE K Sbjct: 436 AVVHGNLACVYYEQGLIDLAIDMYRKAIDLQPNFPDAYCNLANALKEKGLVSEAEAAYNK 495 Query: 286 IWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 ++ P H + +ANI +L L EI E + ++ I + G Sbjct: 496 ALQLCPTHADSQNNLANIKREQGKIEDATRLY-LKAL-EIYPEFAAAHSNLASILQQQGK 553 Query: 341 IDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + A A++IAP + + + + + L A+ Sbjct: 554 LQDAINHYKEAIRIAPTFADAYSNMGNTLK-EMGDVGGALQCYTRAI 599 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ Q H + L I + + A L+I A Sbjct: 484 GLVSEAEAAYNKALQLCPTHADSQNNL--ANIKREQGKIEDATRLYLKALEIYPEFAAAH 541 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ I+P + + A+ + + Sbjct: 542 SNLASILQQQGKLQDAINHYKEAIRIAPTFADAYSNMGNTLKEMGDVGGALQCYTRAIQI 601 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 602 NPGF----ADAHSNLASIHKDSGNVPEAIQSYSTALKLKPDFPDAFCNLAHCL 650 >gi|262304973|gb|ACY45079.1| acetylglucosaminyl-transferase [Cryptocellus centralis] Length = 290 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A ++ +++ P A+ Sbjct: 66 EQGYIEEATCLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALQHYKEAIRIS--PSFAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 54/178 (30%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G ++ A+ AL + P + A + + Sbjct: 26 LANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATCLYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E+ A + +G + + E++++ + A +L + A Sbjct: 86 EF----AAAHSNLASVLQQQGKLNEALQHYKEAIRISPSFADAYSNMGNTLKEMGDIQGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N + ++ E ++ ++ Sbjct: 142 LQCYTRAIQINPAFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 64/216 (29%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q + A E L++ T ++ +L G + A KAL++ P+ Sbjct: 27 ANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATCLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + + A + GD+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALQHYKEAIRISPSF----ADAYSNMGNTLKEMGDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ PE + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PEFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + G++K+ RL ++ Sbjct: 201 QIVCDWSDYEGRMKKLVSIVADQLDKNRLPSVHPHH 236 >gi|194751742|ref|XP_001958184.1| GF23653 [Drosophila ananassae] gi|190625466|gb|EDV40990.1| GF23653 [Drosophila ananassae] Length = 931 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 36/198 (18%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-- 240 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARGSAPTPRVMMKSARLEWALERFDEALR 686 Query: 241 ---------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + LK C SI I +A + Sbjct: 687 LLVEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTQGLKKCPTSIPLWILSANLEERK 746 Query: 274 NKKRKAEVILEKIWKVNP 291 KA ILE+ NP Sbjct: 747 GVLTKARSILERGRLRNP 764 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLETETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|332304873|ref|YP_004432724.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172202|gb|AEE21456.1| PEP-CTERM system TPR-repeat lipoprotein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 916 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 80/232 (34%), Gaps = 19/232 (8%) Query: 133 ERQYNIAHEKLEMML-----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + A E +E TR L S D +AL+ SP+ Sbjct: 378 QGNVKEAKELVEKSSGISTSAEDLTRL----GLLKLSLNNLDGIVNL---EEALEKSPEL 430 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + Y+ K++ +AI Q K+ ++ N A LL + + Sbjct: 431 ESAKKTLATAYITTKQYDKAIELSEQWKR--EDPNDISAYLLAGEVFSKQQE--RTKAKG 486 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIY-THLLS 304 + + L++ A++ I++ +A+ L + K P P +A Y Sbjct: 487 EFQQVLEIDPEHKGAALGLVNIAIAEKDYSQAQSGLSNLLKRYPDYTPALATSYLLSKQQ 546 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 T ++ + ++ + +++ +++ L D A + + +P Sbjct: 547 GKTEQGIELIKQAVAKAPDNQQVIMLYARVLLLEQQYDLALQQFAKVEQASP 598 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + + + N+ ++ + + + A + +LQ A+ +L + Sbjct: 753 QALSAIQAHLEKAPNDGAALMMLAERQINSGD-DEAVASYQTLLQKNPNNFVALNNLAYL 811 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAK 219 + L A +YA KA+ PD + Q V K++ +A+ +N +N + Sbjct: 812 YLQQNKLEDALQYAEKAVKQRPDNAAAVDTYAQVLVAKKDYKKAVQQYDAVVNDDMQNEE 871 Query: 220 EW-NRNRAILLIAR---SLENADKGDMIASYHDAIESL 253 + N A+ L + ++ +M + + A ++ Sbjct: 872 IYLNYVEALFLDGSNLLAKRKLERREMKSEENIARQAQ 909 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 24/205 (11%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 D SA A+ ++P +P + + Y+ K++ A L++ + ++ Sbjct: 35 IAQNDNASAIISLKTAVQLAPKSPEARFELGKVYIEEKQFESAEKELSRALEYG--YDGA 92 Query: 225 RAILLIARSLENADKGDMIASYHDAIESL----KLCDNSIMASICAAKSLISQNKKRKAE 280 + + L+ R+ + I+ D +L K SL+ NK A Sbjct: 93 KVLPLLTRAYQRTGAYAAISEMEDTNVNLSNEEKAEIGFFKVV-----SLVRLNKPDDAR 147 Query: 281 VIL--------EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 I+ + ++K ++ +Y+ +L + L+ +L+ + + E L + + Sbjct: 148 AIIADQGQLETDSVFKS-----LSQVYSDILDKAYPLALQNITQLKAEHPDHPEVLKLAA 202 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 ++ L + A + + + P Sbjct: 203 QLHLSLQDPKAAAQEFDHYVSLYPD 227 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 104/302 (34%), Gaps = 11/302 (3%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 IA ++ P A+K + + Q+ ++ L L+ A ++ + A + L ++ Sbjct: 274 IADNDFPEAQKY-AELGIQNGVNDPSL-RLIAGYAAYQQKDFESAQQHLSLVASNLPGNH 331 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + L ++G A + +S + + + A + + Sbjct: 332 PGLRLLAASQLQLGLNTEAGDVLERIEQVSEQDAQLFSKASYELLRQGNVKEAKELVEKS 391 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + L+ SL N D + E+L+ A A + I+ Sbjct: 392 SGISTSAEDLTRLGLLKLSLNNLDGIVNLE------EALEKSPELESAKKTLATAYITTK 445 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR---ALRLEEINKESVESLVIV 331 + KA + E+ + +P+ A + + + K ++ EI+ E + + + Sbjct: 446 QYDKAIELSEQWKREDPNDISAYLLAGEVFSKQQERTKAKGEFQQVLEIDPEHKGAALGL 505 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 IA+ QA + +K P L + + T++ + + A+ PD Sbjct: 506 VNIAIAEKDYSQAQSGLSNLLKRYPDYTPALATSYLLSKQQGKTEQGIELIKQAVAKAPD 565 Query: 392 PL 393 Sbjct: 566 NQ 567 >gi|262304979|gb|ACY45082.1| acetylglucosaminyl-transferase [Daphnia magna] Length = 289 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P P + + A + + A L + Sbjct: 10 RRAIELQPHFPDAYCNLANALKEKGQVQDAEDCYSTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFIEEATRLYLKALDVFPDFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQ--PSFAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G I +A A+ Sbjct: 124 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDSGQIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A +S + H + L L I + A L + A Sbjct: 34 GQVQDAEDCYSTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPDFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 92 SNLASVLQQQGKLNEALMHYKEAIRIQPSFADAYSNMGNTLKEMQDINGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G + + +LKL + A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGQIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 >gi|153082755|ref|NP_001538.4| interferon-induced protein with tetratricopeptide repeats 2 [Homo sapiens] gi|124488|sp|P09913|IFIT2_HUMAN RecName: Full=Interferon-induced protein with tetratricopeptide repeats 2; Short=IFIT-2; AltName: Full=ISG-54 K; AltName: Full=Interferon-induced 54 kDa protein; Short=IFI-54K gi|386836|gb|AAA59191.1| ISG-K54 [Homo sapiens] gi|55958474|emb|CAI12238.1| interferon-induced protein with tetratricopeptide repeats 2 [Homo sapiens] Length = 472 Score = 45.7 bits (107), Expect = 0.016, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 26/207 (12%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 154 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 273 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H +I Y + K + + + + + ++ I Sbjct: 274 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 316 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI 367 A A A + + +LA + Sbjct: 317 GHAVAHLKKADEANDNLFRVCSILASL 343 >gi|300702622|ref|YP_003744222.1| hypothetical protein RCFBP_10264 [Ralstonia solanacearum CFBP2957] gi|299070283|emb|CBJ41575.1| conserved protein of unknown function, tpr repeat domain [Ralstonia solanacearum CFBP2957] Length = 700 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G + + + + PD + + RA + Q + + Sbjct: 126 QEAGKFAESLDCLERVIALQPDGAQAHNNLANTLRRLEHLERAESHYRQALELDPAY--- 182 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + + +G + A +++L + A + A++ I +++ A +L+ Sbjct: 183 -AEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAEAEIGRHRHEAALRVLD 241 Query: 285 KIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ P HP A E L A + + S E+ ++ +G Sbjct: 242 RLSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQT 301 Query: 342 DQAHAKAMLAMKI 354 D+A A ++ Sbjct: 302 DEALPHFEQAARL 314 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 43/230 (18%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 RI + A A +A+ ++P + A+ + A+ Q + + Sbjct: 262 RRIERPDEALAVARQAVALAPHSAETHHALAMALQALGQTDEALPHFEQAARLPGAVAED 321 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ R++ + G A+ ++L+ S+ A++ + + KA Sbjct: 322 ---ALVGRAILLMEAGRRDAALAAFDQALEQFPGSV-----QARAGRADARTFKAGD--- 370 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P+IA + L +R+LR + + + + K L++ +A Sbjct: 371 --------PDIAALQACLADGE-----RRSLR------DQISAHFALGKAYLDLQDPARA 411 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDPL 393 + + + W A P+P Sbjct: 412 FHHLDAGNRQKRSTFTY------------DGAASSRWMARIADAFPPEPH 449 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 79/266 (29%), Gaps = 31/266 (11%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A L++ A +L F G + A A A+++SP + + Sbjct: 166 ERAESHYRQALELDPAYAEAHSNLAFLLSAQGRYDEAAAAAQHAIELSPRLVDAYLNLAE 225 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + A+ L++ + L AR+ + A +++ L Sbjct: 226 AEIGRHRHEAALRVLDR----LSPFAPQHPAALTARATVLRRIERPDEALAVARQAVALA 281 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 +S A +L + + +A PH E A ++E+ + + RA+ Sbjct: 282 PHSAETHHALAMALQALGQTDEAL----------PHFEQAARLPGAVAEDAL--VGRAIL 329 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQA--------HAKAMLAMKIAPRKEIFLL-LAQI 367 L E + + A + A A P LA Sbjct: 330 LMEAGRRDA------ALAAFDQALEQFPGSVQARAGRADARTFKAGDPDIAALQACLADG 383 Query: 368 EQANSHNTDKILYWTQSALHAMPDPL 393 E+ + + + A + DP Sbjct: 384 ERRSLRDQISAHFALGKAYLDLQDPA 409 >gi|291614515|ref|YP_003524672.1| tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus ES-1] gi|291584627|gb|ADE12285.1| tetratricopeptide TPR_2 repeat protein [Sideroxydans lithotrophicus ES-1] Length = 386 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 9/129 (6%) Query: 160 LYFESCRIGDLNSA--QRYATKAL-DIS--PDAPWVTEAVVQQYVLAKEWSRAITFLNQ- 213 L+ + D A A A ++ P + +++ Y K+W +AI + Sbjct: 106 LFELAQ---DYLKAGILDRAEAAFLELHGTPYEKESLDFLLEIYQKEKDWLKAIDIGQRL 162 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + + A + A+ ++L + S+ ASI +S Sbjct: 163 TALTGEPHGKEAAFFFCELAAGELAAKQTEAAVVHLEQALNVNPQSVRASIMLGDIELSA 222 Query: 274 NKKRKAEVI 282 ++A + Sbjct: 223 GGAQRAIEV 231 >gi|254788153|ref|YP_003075582.1| tetratricopeptide repeat domain-containing protein [Teredinibacter turnerae T7901] gi|237686893|gb|ACR14157.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae T7901] Length = 791 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 110/311 (35%), Gaps = 26/311 (8%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A+ G + +A H+ A ++ +Q + L + A AE + +A+E Sbjct: 369 AVLQGDLLLAKHDGAGAIRVLRTALRQVAVDADVFAALAKAHRAQAE--FELANEYFAKA 426 Query: 147 LQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ++ P + Y+ + L+ +++ + + + + V + Q + ++W Sbjct: 427 VRAPDGIKYAVDYAQFL--LEQKKLSLSEQILQQLILRNRGSERVLNLLAQVKLAKEQWQ 484 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A +Q ++ E ++ R + + KGD + KL +S+ + + Sbjct: 485 EAEMIADQMQQIEGE----DTVVAYIRGMAASGKGDNEGAIAAMENLQKLSPDSMRSMVL 540 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY--------THLLSENTVGKLKRALRL 317 + I ++ +AE L ++ +P N Y HL ++ + Sbjct: 541 LVDAYIKAGQRDEAETFLNRVIATDP-----NSYTGYFLRGNLHLYFGEAEPAVRDYQQA 595 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTD 376 + + + + ++K+ L +G + A ++ P E A++ + Sbjct: 596 IKNDPKKEGAYNALAKLNLRLGKVADAERVLSQGVRRLPDSETLTAFRAELHRRAGELDQ 655 Query: 377 KI---LYWTQS 384 + Sbjct: 656 AVAMYRALLAR 666 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 88/286 (30%), Gaps = 14/286 (4%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A G+ + + A + + + Q + +L V + Q + A L + Sbjct: 504 AYIRGMAASGKGDNEGA--IAAMENLQKLSPDSMRSMVLLVDAYIKAGQRDEAETFLNRV 561 Query: 147 LQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + + G+ A R +A+ P A+ + + + Sbjct: 562 IATDPNSYTGYFLRG--NLHLYFGEAEPAVRDYQQAIKNDPKKEGAYNALAKLNLRLGKV 619 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A L+Q + + A R+ + G++ + L D+ + + Sbjct: 620 ADAERVLSQGVRRLPDSETLTAF----RAELHRRAGELDQAVAMYRALLARNDSLDVVAN 675 Query: 265 CAAKSLISQNKKRKAEVILEKI--WKVNPHPEIANI--YTHLLSENTVGKLKRALRLEEI 320 A +LI+ + L+ ++ + P+ + + ++L+ L R Sbjct: 676 NLASTLITLGGADNLQSALQVAARFRTSKVPQFLDTLGWAYVLNNQLDDGLSLLRRASLK 735 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + E +++ A + A+ + A+ Sbjct: 736 LPDEPEIAYHLAEGYFRNQDYTNAKIQVDEALAKGTDSLSWYTTAE 781 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 58/252 (23%) Query: 151 ATRE---FAVYS----LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 TR + L S + A+ + +P + + + Sbjct: 327 ETRLTVDAGLRKGRLELMNNSLSDAEKTIARL--EELDANNPKVAVLQG---DLLLAKHD 381 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + AI L + A + A + + + + + ++++ + I + Sbjct: 382 GAGAIRVLRTALRQVAV----DADVFAALAKAHRAQAEFELANEYFAKAVR-APDGIKYA 436 Query: 264 ICAAKSLISQNKKRKAEVIL-----------------------EKIWKVNPHPEIANIYT 300 + A+ L+ Q K +E IL ++ W+ IA+ Sbjct: 437 VDYAQFLLEQKKLSLSEQILQQLILRNRGSERVLNLLAQVKLAKEQWQEAE--MIADQMQ 494 Query: 301 HLLSENTV----------------GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + E+TV G + L++++ +S+ S+V++ ++ G D+A Sbjct: 495 QIEGEDTVVAYIRGMAASGKGDNEGAIAAMENLQKLSPDSMRSMVLLVDAYIKAGQRDEA 554 Query: 345 HAKAMLAMKIAP 356 + P Sbjct: 555 ETFLNRVIATDP 566 >gi|206560967|ref|YP_002231732.1| putative porphyrin biosynthesis related protein [Burkholderia cenocepacia J2315] gi|198037009|emb|CAR52930.1| putative porphyrin biosynthesis related protein [Burkholderia cenocepacia J2315] Length = 395 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 113/409 (27%), Gaps = 45/409 (11%) Query: 2 LRLIRYFFVISLVICSFIIVSH-YPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR I + V+ + + V V + + S + + + L Sbjct: 3 LRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLR 62 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + R P + + +K +L + ++ A A K Sbjct: 63 IVRNIWRMPQRVAAYRARARNEKAQASLRDAIANLYAGRFSRAEKAAREA---------- 112 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 N+ L E+ + + A+ A Sbjct: 113 -----------LTVDANLGAASLVAATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAAD 161 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + A + + A + ++ K W + E Sbjct: 162 MRADARDADGALAALADMQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPA 221 Query: 241 DMIASYHDAIESL----KLCDN--------SIMA-------SICAAKSLISQNKKRKAEV 281 + A E+L + + + AA+ L+ ++ +A Sbjct: 222 AAVRLRQQAAENLLRERRHDPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARR 281 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 I+E N + Y + + +++A ++ + E + L + ++ + Sbjct: 282 IVEDALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLW 341 Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + A+K+A + LA++ + ++ +SAL Sbjct: 342 GKAQSFLESALKLADNEALKVRAHRALARLFEHLGETDKAAKHYRESAL 390 >gi|299068043|emb|CBJ39257.1| conserved exported protein of unknown function (TPR-like) [Ralstonia solanacearum CMR15] Length = 640 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 6/191 (3%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A A ++++P + + V +WS L + R AIL Sbjct: 137 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 196 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWK 288 + + + D + A++ L D + A A++ + A L+ K Sbjct: 197 LQQQMSK--SSDPAGAV-SALQHLTTHDTQRPETHLALARAKVVAKDNTGALSELDTALK 253 Query: 289 VNP-HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + P + + A + L ++ + + + S++ + ++++ L DQA A Sbjct: 254 LRPGYEDAAILAAELRADNDPDAAIGGLRTFLKAAPASIDGHLALARMYLVRNQNDQARA 313 Query: 347 KAMLAMKIAPR 357 + KIAP Sbjct: 314 EFEALRKIAPT 324 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 5/142 (3%) Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + A ++L S+ A +++ + + E +L+ + A Sbjct: 137 PSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRAEAILQ 196 Query: 302 L-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L S + G + L + + E+ + +++ + A ++ A+K+ P Sbjct: 197 LQQQMSKSSDPAGAVSALQHLTTHDTQRPETHLALARAKVVAKDNTGALSELDTALKLRP 256 Query: 357 RKEIFLLLAQIEQANSHNTDKI 378 E +LA +A++ I Sbjct: 257 GYEDAAILAAELRADNDPDAAI 278 >gi|225872021|ref|YP_002753475.1| serine/threonine-protein kinase [Acidobacterium capsulatum ATCC 51196] gi|225794490|gb|ACO34580.1| serine/threonine-protein kinase [Acidobacterium capsulatum ATCC 51196] Length = 814 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 91/303 (30%), Gaps = 57/303 (18%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIG-----DLNSAQRYATKALDISPD 186 + A E E + + L + + R G + +A+R KAL I P Sbjct: 501 DLDRAREMFEQVTEREPEYAPGWSGLGVTHMQYTRHGFGGHMHIMAARRAFDKALQIDPG 560 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + E A + +K +L L G + Sbjct: 561 SADANLYRIYMLLARGEKESARHGIEDML--SKSARNWNVHVLAGTMLRL--DGMYDEAL 616 Query: 247 HDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304 +L L + A+ QN+ AE L+K + P HP + + Sbjct: 617 EQFHLALNLNPSGAPMIYNHRARVYQYQNQLDLAEGELQKGLTLEPRHPLL-------RT 669 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIFL 362 ++++ +E + + + L + AM ++I R+ Sbjct: 670 SLAYQRMRQ---------GQLEEAIAMMEAVLKDDTSLRIIYPTLAMCYVQIGQRERGAT 720 Query: 363 L-----LAQIEQ------------ANSHNTDKILYWTQSALHA--------MPDPLWISD 397 L +A E A + + L+W + A++ +P W Sbjct: 721 LIEESSMAAAEADSEMAYRLATYFAVDGDESEALHWLRRAIYLGNENYPWFSRNPAWNKL 780 Query: 398 DGY 400 G+ Sbjct: 781 RGH 783 >gi|298492898|ref|YP_003723075.1| TPR repeat-containing protein ['Nostoc azollae' 0708] gi|298234816|gb|ADI65952.1| TPR repeat-containing protein ['Nostoc azollae' 0708] Length = 371 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 20/222 (9%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVT-------EAVVQQYVLAKEWSRAITFLNQK 214 + GD A +A+ ++ + + + ++ + L Sbjct: 11 VQKNLYGDYEGAITVFNEAIQLNCNLAEAYYHRGYSCLELAEFNQAIADYQQVTKILKNS 70 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K A N A R L GD ++ D E+LK I A L Sbjct: 71 AKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYSNRGNILHILG 130 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENT------VGKLKRALRLEEINKESVESL 328 K +A + ++NPH +A Y H + G + + EIN E+ Sbjct: 131 KYTEAISDYNQAIQLNPH--LAAAY-HNRGNSRYALQDYQGAIADYNQALEINPNFGEAY 187 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 + + A A A++ P + A +E+ Sbjct: 188 YNRGLVMSHLQDYQGAIADFNQAIQQDPED----IQAYLERG 225 >gi|269140722|ref|YP_003297423.1| cellulose synthase operon C domain protein [Edwardsiella tarda EIB202] gi|267986383|gb|ACY86212.1| cellulose synthase operon C domain protein [Edwardsiella tarda EIB202] gi|304560503|gb|ADM43167.1| Cellulose synthase operon protein C [Edwardsiella tarda FL6-60] Length = 1153 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 77/253 (30%), Gaps = 54/253 (21%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y+A TGL AA N A+ + +QH E L L Q + A E Sbjct: 272 YRARSTGLAQAAAGNDSQAQPLLQQTLRQHPNDAETLGAL--AQTYSQQGDRPRAIALFE 329 Query: 145 -MMLQIPATREFA-VYSLYF-----ESCRIGDLN-SAQRYA------TKALDISPDAPWV 190 + P + + + SL + GD +A +YA +A + + + Sbjct: 330 RAIAADPHSDQLSKWQSLLKTNRYWLLIKQGDEALAAHQYALAQQKYRQAQALDGENAYG 389 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAK----------------------------EWN 222 + + ++A + Sbjct: 390 PIGLGDVAAAQGDLAQAEQSYRLALRRDPLNGSALRKLVSLYQQQSPDKALAYLQQLPAA 449 Query: 223 RNRAILLIARSLENADKGDMIA----------SYHDAIESLKLCDNSIMASICAAKSLIS 272 + RA+ L++ A + E+ +L + + + A +L+S Sbjct: 450 QRRAMQSSYSELQSDALQQQAAALAGRQAWGPALEKLNEAQRLTPDDVWLNYRLAGTLVS 509 Query: 273 QNKKRKAEVILEK 285 + +A+ ++++ Sbjct: 510 AGQPERADALMQR 522 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 20/235 (8%) Query: 63 RFFLSCPAM--LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 R + P L ++ + + G ++AAH LA++ + + Sbjct: 330 RAIAADPHSDQLSKWQSLLKTNRYWLLIKQGDEALAAHQYALAQQKYRQAQALDGENAYG 389 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L +V A A + + L+ A+ L + + A Y + Sbjct: 390 PIGLGDVAAAQ--GDLAQAEQSYRLALRRDPLNGSALRKLVSLYQQQS-PDKALAYLQQL 446 Query: 181 LDISPDAPWVTEAVVQ---------QYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLI 230 A + + +Q + W A+ LN+ ++ + N + Sbjct: 447 PAAQRRAMQSSYSELQSDALQQQAAALAGRQAWGPALEKLNEAQRLTPDDVWLNYRLAGT 506 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 S ++ D + D S + A L S+ + +A+ +L + Sbjct: 507 LVSAGQPERADALMQRMDQRFSHRGDQ-----VYARALYLSSRGQPDQAQAVLRR 556 >gi|159110809|ref|XP_001705647.1| Hypothetical protein GL50803_113023 [Giardia lamblia ATCC 50803] gi|157433735|gb|EDO77973.1| hypothetical protein GL50803_113023 [Giardia lamblia ATCC 50803] Length = 315 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 80/214 (37%), Gaps = 33/214 (15%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G+ A A +AL + + P V +++ + + +A ++ +A + Sbjct: 31 KLEAGNFAKALTIAERALPLC-NQPSVLDSLGEIFSVAGDFQKATSC------------- 76 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A++L + + + +++ ++I + S + R + IL Sbjct: 77 ------YAKALGYDHLTHAAGVRYMTLYEITGDPSNLNSAIGIFRKHTSTEESRTSL-IL 129 Query: 284 EKIWKVNPHPEIANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 +A+ Y L +T ++ A +N +E + ++ L S D Sbjct: 130 ALA-------TLADAYLTRLDPPDTKAAIRTAKEAISMNPSFIEPHISLAGAHLVAESFD 182 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 A A+ A+++ ++ + +IEQA + + Sbjct: 183 LAEKAALCALELMEQRGFY----KIEQAEDGSEE 212 >gi|54298485|ref|YP_124854.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris] gi|53752270|emb|CAH13702.1| hypothetical protein lpp2549 [Legionella pneumophila str. Paris] Length = 577 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 15/239 (6%) Query: 125 LEVQIALA--ERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKA 180 L Q E A E + Q P T L + ++GD+ +A Y +A Sbjct: 8 LFAQAYKLQYEGHLPQAISLYEQILAQSPKHTETLHFLGLTYA--QLGDMENAILYFLQA 65 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 I+P+ + + Y A + AI + Q + E+ + L +L N Sbjct: 66 KKINPNDVGILNNLANAYKKAGQLDEAIKYYQQAIEIKPEYVQAHNNLAATYALLN---- 121 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 + + H + ++ + A L+ + A+ + +NP H E A Y Sbjct: 122 NYQKALHHYVIAVNTEPDFSAAHFNLGLLLLKNQQLSAAKTQFNNVIALNPKHRE-AQFY 180 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 HL + ++ E + E V+SL+ + IAL+ A A+ + Sbjct: 181 LGILHLEDNLLSEAEQAFHKVLEQDHEHVQSLINLGVIALKREQNQLAVDYFTKALALD 239 >gi|159110588|ref|XP_001705547.1| Hypothetical protein GL50803_4883 [Giardia lamblia ATCC 50803] gi|157433633|gb|EDO77873.1| hypothetical protein GL50803_4883 [Giardia lamblia ATCC 50803] Length = 1459 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 20/178 (11%) Query: 80 NYDKGYKALY-TGL-MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 N D+ A L ++ A AR + E E + A R+ Sbjct: 382 NRDRALSAKSLRSLRVAAKADTDKKARAAEQARRDEEARAAEQARRDEEARAAEQARRDE 441 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-----KALDISPDAPWVTE 192 A E + R ++ R + +A++ A +A + + Sbjct: 442 EARAA-EQARRDEEARAA------EQARRDEEARAAEQ-ARRDEEARAAEQARRDEEARA 493 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 A +Q +E A ++ A E R AR+ E A + + + A Sbjct: 494 A--EQARRDEEARAAEQARRDEEARAAEQARRD---EEARAAEQARRDEEARAAEQAR 546 >gi|238027557|ref|YP_002911788.1| Flp pilus assembly protein TadD contains TPRrepeats [Burkholderia glumae BGR1] gi|237876751|gb|ACR29084.1| Flp pilus assembly protein TadD contains TPRrepeats [Burkholderia glumae BGR1] Length = 284 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 5/125 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL A Q + + + +L P L + GD A + +A Sbjct: 91 TRLLRADALRATSQLDASEQAYTQLLNTP-LAARGYRGLGLIAGARGDFARAAKLLEQAT 149 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++P + + A + A L + E + ++ +L G Sbjct: 150 LLAPTDAAALSDLAYARMRAGDPGGARVPLMKA----AELDHRNPRIMSNLALFLMASGH 205 Query: 242 MIASY 246 + Sbjct: 206 PENAQ 210 >gi|115378511|ref|ZP_01465668.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] gi|115364480|gb|EAU63558.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] Length = 1034 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 9/225 (4%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQ--KKKNAKEWNRNRAI 227 A T A +SP+ P + + L ++ S A+ + K K+ + R+R Sbjct: 616 EKALNMYTNARKLSPEHPLARIGMAESQLALDQDLSLALADMEALGKSKDLVDPLRSRQQ 675 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ R L + D + L + +A A + + K +A+ E Sbjct: 676 LIQGRLLTELGRYDEALALLAQGVKGPLAFDFHLALGDAGR---AAGKLEEAQQAYEAAL 732 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 K+ P E A L + + + L ++ E + ++ + + +A A+ Sbjct: 733 KLQPRSEDA---REGLGRTLLDRDRVKEVLARLDGEGRKVALVRAAAHVRQEDWKRARAE 789 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 + + N D+ + A++ + P Sbjct: 790 LEKTRVNNRYPLEAVGYLALADTMEGNGDQAREILEKAVNGVKKP 834 >gi|326804297|ref|YP_004322115.1| LPXTG-motif cell wall anchor domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651400|gb|AEA01583.1| LPXTG-motif cell wall anchor domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 926 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 4/71 (5%) Query: 421 KIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPH 480 + P P+ + + E P + + KK P + + P P Sbjct: 763 QTPPDKPKKPETPPVTPPDEPKKPETPPVTPPDEPKKPETPPVTPPDKPKK----PETPP 818 Query: 481 IRQPDDPGIKE 491 + PD P E Sbjct: 819 VTPPDKPKKPE 829 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 4/70 (5%) Query: 422 IPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHI 481 P P+ + + + P + + KK P + + P P + Sbjct: 792 TPPDEPKKPETPPVTPPDKPKKPETPPVTPPDKPKKPETPPVTPPDEPKK----PETPPV 847 Query: 482 RQPDDPGIKE 491 PD P E Sbjct: 848 TPPDQPKRPE 857 >gi|220918792|ref|YP_002494096.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956646|gb|ACL67030.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 426 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 47/173 (27%), Gaps = 31/173 (17%) Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++ + + + +AR E +GD + +L L ++ Sbjct: 2 ARRADGGDGVDDELAFHLARGTELLAQGDADRARAALERALDLGPKDAKVLALLGQACYR 61 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 Q + A W RL + N + V + Sbjct: 62 QGQFDDAA----IAW---------------------------QRLVDENPVEPAARVNLG 90 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 L+ ++A + +A+ + P + + S + W + A Sbjct: 91 LAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGAREWFRKA 143 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 2/135 (1%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G +A + AR + + V L Q + Q++ A + ++ Sbjct: 19 LARGTELLAQGDADRAR--AALERALDLGPKDAKVLALLGQACYRQGQFDDAAIAWQRLV 76 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 A +L + A+R ALD++PD + + + + + A Sbjct: 77 DENPVEPAARVNLGLAFLKAKHHEEARRQLEIALDLNPDHRKAMGYLGLALLESGDPAGA 136 Query: 208 ITFLNQKKKNAKEWN 222 + + + Sbjct: 137 REWFRKAGSDHMVAR 151 >gi|157812756|gb|ABV81123.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Lithobius forticatus] Length = 289 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ Q H + L L I + A + + P A Sbjct: 34 GQVAEAEECYNTALQLCPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIGSYRTALKLKPDFPDAYCNLAHCL 200 Score = 37.6 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A E LQ+ T ++ +L G A R KAL++ P+ Sbjct: 27 ANALKEKGQVAEAEECYNTALQLCPTHADSLNNLANIKREQGFTEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + A + D+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIGSYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWSDYEVRMKKLVAIVADQLDKNRLPSVHPHH 236 >gi|104780088|ref|YP_606586.1| hypothetical protein PSEEN0860 [Pseudomonas entomophila L48] gi|95109075|emb|CAK13771.1| conserved hypothetical protein; TPR domain protein [Pseudomonas entomophila L48] Length = 574 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 87/264 (32%), Gaps = 11/264 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-DISPDAPWVT 191 +Q++ A L+ M++ A + A +L +A R AL PD Sbjct: 300 TKQWDEAEGYLQEMVERDANADAAHLNLGRIREERHQPAAALR--EYALVGAGPDYLPAQ 357 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + A L + ++ ++ L + + + G + + Sbjct: 358 LRQADILIANGRSAEASRLLAEAREAQPDYAIQ---LYLIEAESLGNNGKEAQAAQVLEQ 414 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 ++K + + A +N + E L I P +A + + Sbjct: 415 AIKRYPDDLNLLYTRAMLAEKRNDLGQMEKDLRAIIAREPENAMALNALGYTLADRTTRY 474 Query: 312 KRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 A L ++ + L + +A MG++D+A + A + P E+ L ++ Sbjct: 475 TEAKALIDKAHQLTPDDPAVLDSLGWVAYRMGNLDEAERQLRQAFERFPDHEVAAHLGEV 534 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 AN + W A PD Sbjct: 535 LWANGKRREARQVW-GKGFEAQPD 557 >gi|237724004|ref|ZP_04554485.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265751305|ref|ZP_06087368.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229437668|gb|EEO47745.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|263238201|gb|EEZ23651.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 316 Score = 45.7 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 49/268 (18%) Query: 99 NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + A++M F ++E L + + A L+ M Sbjct: 32 DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91 Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + ++ + Y + D + + KAL + P + + K+ AI Sbjct: 92 QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + +++ + R+ + D + L L + A + + Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 L + N+ PE A ++ +N + ++ Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ ++ L D+A A A++I P Sbjct: 233 ILSGELYLANKDFDKALAIYDEAIEINP 260 >gi|332298998|ref|YP_004440920.1| restriction endonuclease [Treponema brennaborense DSM 12168] gi|332182101|gb|AEE17789.1| restriction endonuclease [Treponema brennaborense DSM 12168] Length = 471 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 21/225 (9%) Query: 157 VYSLYFESCRIGDLNS------AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 +Y L + G+ ++ A R A K L P + Y W +A+ Sbjct: 41 LYGLSALKKKKGENSAPKNKTAAIRDAVKRLAQDPHNAHALNVLSDLYYRDHAWEKALPL 100 Query: 211 LNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 A+ + + + + + +L++ + + A++ Sbjct: 101 FELMLNIAEVHREIDLQQTSLRQGICALKLNRPQDALRGLLPALRMRPENFEVNYNLAQA 160 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEIN 321 + KA +L+K +N E +++Y L + + LKRA N Sbjct: 161 YYQCGEFEKAVPLLKKALMLN--REASDVYGLLGLSFYNLKKFRDALPYLKRA---LNEN 215 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 E+ E L ++ + G D+A M ++ P+ LA Sbjct: 216 PENKEVLFAMADSMQQSGFGDKAMKVFMH-LRPDPQFGAKSCLAA 259 >gi|157106778|ref|XP_001649477.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti] gi|108868774|gb|EAT32999.1| o-linked n-acetylglucosamine transferase, ogt [Aedes aegypti] Length = 793 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A ++ + H + L L I + A + + P A Sbjct: 67 GQVQEAEDCYNTALRLCPNHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 123 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 124 HSNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 183 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 184 INPAF----ADAHSNLASIHKDSGNIPDAIQSYRTALKLKPDFPDAYCNLAHCL 233 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + N A L + Sbjct: 43 RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLCP----NHADSLNNLANIKR 98 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 99 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 156 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I A A+ Sbjct: 157 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPDAIQSYRTAL 216 Query: 353 KIAPR 357 K+ P Sbjct: 217 KLKPD 221 >gi|289208395|ref|YP_003460461.1| hypothetical protein TK90_1216 [Thioalkalivibrio sp. K90mix] gi|288944026|gb|ADC71725.1| tetratricopeptide repeat protein [Thioalkalivibrio sp. K90mix] Length = 408 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 84/278 (30%), Gaps = 45/278 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + + +E L Q L + A + P Sbjct: 83 GEVDRAIRIHQNLVARPSLKDEQRAQALNELGQDFLLAGVLDRAEAVFRELADSPHQAVQ 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ L + V + +EW RAI + K Sbjct: 143 ALKGL-------------------------------QHVYETQ---REWERAIEVGTRLK 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + R A + ++GD S A ++ L A + ++ ++ Sbjct: 169 AHNVPNEHLRIAHYHCELATIALEQGDRSTSAERAAQAEGLVPGLSRALLIKSEIAERED 228 Query: 275 KKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKL-KRALRLEEINKESVES 327 + A + P P + ++ L EN +G+L + L + Sbjct: 229 RIADAIACGREAVARTPPLAPLVVPRLERLHQALPGENRLGQLEQTLEDLANSR-GITVA 287 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ++ G +D A ++ + + P LL A Sbjct: 288 RIALMRLYRRTGRLDAALSELGMILSQRPVPTSGLLEA 325 >gi|167033491|ref|YP_001668722.1| bacteriophage N4 receptor, outer membrane subunit [Pseudomonas putida GB-1] gi|166859979|gb|ABY98386.1| conserved hypothetical protein [Pseudomonas putida GB-1] Length = 1001 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 15/139 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L A A + R A + GD +A+RY Sbjct: 495 RLPLAYALEAAGDSEAALPIWRSLPDSAWTDNARLTAARG----ALNAGDAGAARRYWD- 549 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A W A + Q + A+ F Q + + A A+ Sbjct: 550 AAAHRSADDWALGAAIAQR--QGDPQTALGFQRQALAHNPRADHYYAASSTAQL-----A 602 Query: 240 GDMIASYHDAIESLKLCDN 258 GD S E++++ + Sbjct: 603 GDSAQSTAWLAEAVRMAPD 621 Score = 36.8 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 7/131 (5%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 AA + A + + N L + AL A + A Sbjct: 504 AAGDSEAALPIWRSLPDSAWTDNARLT---AARGALNAGDAGAARRYWDAAAHRSADDWA 560 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ + R GD +A + +AL +P A A LA + +++ +L + Sbjct: 561 LGAAI---AQRQGDPQTALGFQRQALAHNPRADHYYAASSTAQ-LAGDSAQSTAWLAEAV 616 Query: 216 KNAKEWNRNRA 226 + A + R RA Sbjct: 617 RMAPDQPRYRA 627 >gi|157126009|ref|XP_001654491.1| pre-mrna splicing factor [Aedes aegypti] gi|108873417|gb|EAT37642.1| pre-mrna splicing factor [Aedes aegypti] Length = 931 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 19/164 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GSRESLEALLQKAVAHCPKSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +L N + Sbjct: 627 ANPNSEDIWLAAVKLESENSEFERARRLLAKARASAPTPRVMMKSAKLEWALNNLED--- 683 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +++K+ + AK + + + + + +LE+ Sbjct: 684 --ALSLLEDAVKVFPDF-------AKLWMMKGQIEEQKNLLERA 718 Score = 40.3 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 15/190 (7%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 W+ +A + A N + R+ S Sbjct: 530 KQTWIDDA--DHCAKEGAFECARAVYNYALSEFPSKKS-----IWLRAAYFEKNHGSRES 582 Query: 246 YHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLL 303 ++ ++ C S + + AKS A IL ++ NP+ +I L Sbjct: 583 LEALLQKAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEDIWLAAVKLE 642 Query: 304 SENTV-GKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLAMKIAPR-KE 359 SEN+ + +R L + + V++ +K+ + +++ A + A+K+ P + Sbjct: 643 SENSEFERARRL--LAKARASAPTPRVMMKSAKLEWALNNLEDALSLLEDAVKVFPDFAK 700 Query: 360 IFLLLAQIEQ 369 ++++ QIE+ Sbjct: 701 LWMMKGQIEE 710 Score = 37.2 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEVNPLSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA +R + K Sbjct: 337 -------LEAARLQPPDTAKGVIAQAARHIPTSVRIWIKAADLETEVKARR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E+ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPEDAKILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|108760387|ref|YP_631635.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108464267|gb|ABF89452.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 1692 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 79/261 (30%), Gaps = 19/261 (7%) Query: 148 QIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + P A+ + R+ D + A +AL+ P + + + Sbjct: 1000 RDPRGAIEALIGAAKLAVGRLNDADGATALYRQALEKDPLHAGAQAGLEELLAQRGGSAD 1059 Query: 207 AITFLNQKKKNAKEWNR----NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + L +++ AK R + A L + D + ++L A Sbjct: 1060 -LAALQERRAEAKLAQRDGLAAATAFVSAARLHHTALNDRARALALLEKALSAQPGHPEA 1118 Query: 263 SICAAKSLISQNKKRKAEVILEKIWK--------VNPHPEIANIYTHLLSENTVGKLKRA 314 L+ + +A +L + + H + N+Y L++ + Sbjct: 1119 LELRGALLLEAQQYPEAAAMLSQRVQLGGDPRVLAQFHMTLGNLYASHLNDPSRAAAHYQ 1178 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA----PRKEIFLLLAQIEQA 370 L + +E+L ++ + + + A ++ PR L LA+ Sbjct: 1179 TVLATL-PRHLEALERLAGLHTQARNWAGAVDCLHKLLQQELPPEPRARFTLELARTYDE 1237 Query: 371 NSHNTDKILYWTQSALHAMPD 391 + + AL P Sbjct: 1238 GLGDAGAATPLYRRALELSPG 1258 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 62/198 (31%), Gaps = 19/198 (9%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + D A + L +SP +A+ + Y W + + + +++ + Sbjct: 590 ENLKDRAGAISAYERVLALSPSYLPALKALGRLYAQDGRWEKLVDMYRAESESSASTEQA 649 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A++ L + E+L L + A A+ +Q Sbjct: 650 AALIYKIGELYEQRLNQDNEAIASYNEALMLAPSYFPALRALARIYRAQ----------- 698 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W+ + + + N L+RA L + E ++ ++A++ Sbjct: 699 AAWES-----LVEV-LRAEAANRTDPLERANALYQAAA-IWEEQLLRPELAIDTYQEVL- 750 Query: 345 HAKAMLAMKIAPRKEIFL 362 A + + ++L Sbjct: 751 RLTPGHAATLRALERLYL 768 Score = 36.8 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 85/274 (31%), Gaps = 26/274 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + LA + + Q L L +++A A+ + A E L ++ TR Sbjct: 895 GDARLAFVLERGLRQ--AGDAAGLARLYTMRLASAQ-DADEALEMLLRTAELADTRF--- 948 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 DL A +AL++ P + + + +++ A L + + Sbjct: 949 ----------NDLERAAALYRQALELQPQCLPAMQGARRVALKRGDFAGARAALEAEARV 998 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN--- 274 +++ L+ A L D + ++L+ A + L + Sbjct: 999 SRDPRGAIEALIGAAKLAVGRLNDADGATALYRQALEKDPLHAGAQAGLEELLAQRGGSA 1058 Query: 275 -----KKRKAEVILEK--IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 ++R+AE L + A H + L + E+ Sbjct: 1059 DLAALQERRAEAKLAQRDGLAAATAFVSAARLHHTALNDRARALALLEKALSAQPGHPEA 1118 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L + + LE +A A +++ + Sbjct: 1119 LELRGALLLEAQQYPEAAAMLSQRVQLGGDPRVL 1152 >gi|42522206|ref|NP_967586.1| putative O-linked GlcNAc transferase [Bdellovibrio bacteriovorus HD100] gi|39574737|emb|CAE78579.1| putative O-linked GlcNAc transferase [Bdellovibrio bacteriovorus HD100] Length = 348 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 60/160 (37%), Gaps = 16/160 (10%) Query: 133 ERQYNIA-HEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + A + E + T ++ R GD + A+ Y KA ++P Sbjct: 137 SGRDQEALDKYFEALAVLTDETDTLFETYKNMGNIFVRQGDFDGAEEYYNKAYTMNPQ-- 194 Query: 189 WVTEAVV----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 ++ ++ V ++ +++ + + E ++ + ++ ++ GDM Sbjct: 195 --SDVLLVNFGTLEVQRGDYDKSLYCFRKAVEINPENDK----AWVGLAMVHSQFGDMEL 248 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 ++ + ++ + + A AA + K +KA L+ Sbjct: 249 AWANIETAIDINPQNRTAVHLAANWGLRDGKLQKAIEALQ 288 >gi|117923878|ref|YP_864495.1| hypothetical protein Mmc1_0564 [Magnetococcus sp. MC-1] gi|117607634|gb|ABK43089.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 505 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 32/200 (16%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE--------------WSRA 207 ES Q +A +AL + A++Q Y + W +A Sbjct: 8 RESLEKAITLQQQGHAEEALLL-------YHALLQHYPKQADLYYLTGLAHQDLQQWPQA 60 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 L Q A + R+ +L + L+ + + ++ L A Sbjct: 61 CERLEQAV--ALDGQRSDFLLALGMVLQELEL--PEQAKQRYAQAALLDPQDYQAYYHIG 116 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINK 322 S I + R+A + K P++ + +L + G L+ ++N Sbjct: 117 DSCIDLGQNRQAIEAFTQAIKCK--PDLQEAWLNLGLCLKAAGELPGALQAFTTALQLNP 174 Query: 323 ESVESLVIVSKIALEMGSID 342 + ++ V + L MG Sbjct: 175 DDAKAKVDYAMALLAMGDYA 194 >gi|320183851|gb|EFW58683.1| tetratricopeptide repeat protein [Shigella flexneri CDC 796-83] Length = 389 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + N SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|293602941|ref|ZP_06685380.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292818735|gb|EFF77777.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 826 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 93/288 (32%), Gaps = 61/288 (21%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-----------LEVQIA 130 ++G +AL G + R + + + L L L V+ A Sbjct: 538 EEGTRALEEGRL----------RDAAERICAHRLLNPDALTALRAQRSFERAMRLGVRAA 587 Query: 131 LAERQYNIAHEK--LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L + + + + ++ A+ + +GD +A R+ +A AP Sbjct: 588 LLAGNHKEVIDLTDIALDTRVDFPELDAMRG--RAADALGDKQTAMRHLEQAAAGE-AAP 644 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 T+ + W + + +A+L A + + A Sbjct: 645 LSTQLYFARVAFNGGWFG------------EAIDAYKAVLANASADQTARD--------- 683 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---------PEIANIY 299 E+ + +I A+ +++ R A +LE++ + P IA +Y Sbjct: 684 --EAERQLGRLGPRAIRGAREILAAGDHRGAWNLLERVAQSWPAMTEVEHEKRRIIAVLY 741 Query: 300 THLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +T +L ++ ++ L + + A+ + +QA Sbjct: 742 AEARALDPASTTERLALGEKIVQLVPTDAIGLRLAAVGAMRLHRFEQA 789 >gi|284106837|ref|ZP_06386280.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] gi|283830016|gb|EFC34292.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] Length = 351 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 69/203 (33%), Gaps = 13/203 (6%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L ++ + L++A KA++I P + Y + +AI+ K Sbjct: 108 GLVYQHQKN--LDAAATVLKKAIEIYPRFADAQLNLAFAYDQLGDREQAISAYQAALKMD 165 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ L + +GD + + A + A+ +++ Sbjct: 166 P----SQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQDAKAWLLLAQLAEKSLSEKQ 221 Query: 279 AEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A EK ++ P++ Y + + + +N E+ + + Sbjct: 222 AIEAYEKALGIS--PDLLEAHYALGYLMQAQDQPQQAVNHFQEVVRLNPNHAEAQLNLGV 279 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 + + +D+A A + A+K+ P Sbjct: 280 LLANLDKLDEAEAAYLAALKLNP 302 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 21/207 (10%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADK----------------GDMIASYHD 248 A NQ +A +A + ++L+ + + Sbjct: 30 DEAQNLFNQGASHANNQEFQQAAKSLQQALDVFPRFAAAHHLLGVVSFTGLQQPDQAVTH 89 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSE 305 ++++L N A Q A +L+K ++ P ++ + + Sbjct: 90 LKKAVELHPNFARAYFDLGLVYQHQKNLDAAATVLKKAIEIYPRFADAQLNLAFAYDQLG 149 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL 364 + + +++ + +L ++ + G DQA + P + +LLL Sbjct: 150 DREQAISAYQAALKMDPSQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQDAKAWLLL 209 Query: 365 AQIEQANSHNTDKILYWTQSALHAMPD 391 AQ+ + + I + + AL PD Sbjct: 210 AQLAEKSLSEKQAIEAY-EKALGISPD 235 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 50/145 (34%), Gaps = 8/145 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVT 191 A + L++ ++ A+++L GD + A + P W+ Sbjct: 149 GDREQAISAYQAALKMDPSQLTALFNLATLYDMQGDTDQAMKELQTLTSQDPQDAKAWLL 208 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A + + L++ +AI + + + A + ++ D + + E Sbjct: 209 LAQLAEKSLSE--KQAIEAYEKALGISPDL--LEAHYALGYLMQAQD--QPQQAVNHFQE 262 Query: 252 SLKLCDNSIMASICAAKSLISQNKK 276 ++L N A + L + +K Sbjct: 263 VVRLNPNHAEAQLNLGVLLANLDKL 287 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 6/163 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + L L + + + A ++L+ + A Sbjct: 149 GDREQAISAYQAALKMDPSQLTALFNL--ATLYDMQGDTDQAMKELQTLTSQDPQDAKAW 206 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + + A KAL ISPD A+ + +A+ + + Sbjct: 207 LLLAQLAEKSLSEKQAIEAYEKALGISPDLLEAHYALGYLMQAQDQPQQAVNHFQEVVRL 266 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 N A L + L N DK D + + A LKL + Sbjct: 267 NP--NHAEAQLNLGVLLANLDKLDEAEAAYLAA--LKLNPGLV 305 >gi|270005381|gb|EFA01829.1| hypothetical protein TcasGA2_TC007431 [Tribolium castaneum] Length = 921 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 39/244 (15%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ P+ Sbjct: 576 NRTKEAQEVYERALLYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHE- 630 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKG 240 +A++ +L + N+ + R +L + D+ Sbjct: 631 --QALLNSAIL-------LQEFNRPELRKIARERLLKLLDKDSNNERVHFNLGMLAMDEK 681 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------ 294 ++ + H ++ L + + A L + +A L + V HP+ Sbjct: 682 NIEEAEHWFRRAVHLKADFRSSLFNLALLLADDQRPLEAAPFLNQ--LVKYHPDHVKGLI 739 Query: 295 -IANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + +IY ++ + R R+ E++ E+++ L + + +E G + +A A A Sbjct: 740 LLGDIYINNIKDLDAAENCYR--RILELDPENIQGLHNLCVVHVERGKLLEAQACLEKAH 797 Query: 353 KIAP 356 ++AP Sbjct: 798 QLAP 801 >gi|302912770|ref|XP_003050773.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731711|gb|EEU45060.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 613 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 5/197 (2%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +S+ A + +N+ VY Q + A + + + + Sbjct: 369 ISLELGEPDKAE--AEFAKALEQDNNDPDVYYHRAQAHFIKGDLADAQKDYQKSIDLDKD 426 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 F+ L ++G + S+ + + P P V + + +S A+ + Sbjct: 427 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQGNFSEAVEKFD 486 Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + K+ + LI ++L K D + ++L + +A A+ Sbjct: 487 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEALCQKALIIDPECDIAVATMAQL 546 Query: 270 LISQNKKRKAEVILEKI 286 L+ QN A E+ Sbjct: 547 LLQQNNVPAALKYFERA 563 >gi|146340904|ref|YP_001205952.1| TPR repeat-containing protein [Bradyrhizobium sp. ORS278] gi|146193710|emb|CAL77727.1| putative TPR repeat protein [Bradyrhizobium sp. ORS278] Length = 1410 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 82/236 (34%), Gaps = 13/236 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A + L+++L T A+ L L+ A+ Y +A+ ++ Sbjct: 789 AKKLQMRGELGDAEQILKLILAGQPTNFDALVGLGMIRTTANRLDEAKDYFQRAVAVNDK 848 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++ A + A+ + +L ++ ++G + S Sbjct: 849 SAEAHGSIGAVEASAGRYEAAVQHYETALSLSPSHPG----ILYGFAMVRQNQGLIEEST 904 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301 ++ + A L + K +A K+ +P H IAN+ Sbjct: 905 ALLRRAIDNKPQHLDAHFALGNLLYTAGKDIEAAKHYLKVLDFSPEHAETHNNIANVLLR 964 Query: 302 -LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E + KRA + ++ + LE+ ++Q+ + +LA+KI P Sbjct: 965 QGHRERAIEHYKRA---IASRPDYADAYGNLGNAFLELNQLEQSIEQNLLAIKIKP 1017 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 78/286 (27%), Gaps = 19/286 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 LA+ LL + A LE+ L A Sbjct: 96 GLGDLAKASTHLQRAVELDDQSGEARLLLGSALTSLGDSVGAVRHLELALAAHPNDADAH 155 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L F R+G A + AL P+ ++ + + AI + Sbjct: 156 QALGFALQRLGQFERALSHHEAALAARPNFAAAAGSLGDACRMLGRHAEAIAHYQRALAI 215 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++L+ G A+ ++L + + A + N Sbjct: 216 QPNAP----VVLLNIGGCQQAIGQADAAIRTYQQALAVSPHLAEAHYNLGNLHLEMNSWP 271 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A E+ P H +AN + A L + + Sbjct: 272 AAIFHYERAIAERPDFPEAHNNLANA-LQSRGRSDEALAHYAEAL-RRRPDYATAHRNRG 329 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLLLAQIEQA 370 ++ ++A A A+ PR + ++L ++++A Sbjct: 330 DTLRDVKRFEEAIASYRTALSHDPRDVTTMNHLAGVLMILGRLDEA 375 >gi|46199597|ref|YP_005264.1| hypothetical protein TTC1295 [Thermus thermophilus HB27] gi|46197223|gb|AAS81637.1| hypothetical protein TT_C1295 [Thermus thermophilus HB27] Length = 453 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 18/227 (7%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ +A + AL+ P + + + RA + + + ++ Sbjct: 171 GEREAAVPHLYAALNREPGRAEAWDLLARVLAEVGLADRARREVERGLEAVQDPKGK--A 228 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LL+ R + + + E+L L + A+ + + ++ L++ + Sbjct: 229 LLLLRKGTLVEDPEPL-----WREALALDPDLWQAAYLLGRRRLEAGDLKEGLRWLQEAY 283 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES-VESLVIVSKIALEMGSIDQAHA 346 PE+A + KE+ + ++ A +G +A Sbjct: 284 AKGQDPEVALALAAAYLKAKD-----YANAYRYAKEAGPAGAFLQAQAAQGLGRRQEALK 338 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +P+ +E+ Q+A A DP Sbjct: 339 LLEGIA--SPQALALRGSLLLEEGQGEEAVAA---LQAAYEATRDPQ 380 >gi|22299903|ref|NP_683150.1| hypothetical protein tlr2360 [Thermosynechococcus elongatus BP-1] gi|22296088|dbj|BAC09912.1| tlr2360 [Thermosynechococcus elongatus BP-1] Length = 350 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 78/272 (28%), Gaps = 43/272 (15%) Query: 85 YKAL--YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 Y AL G+M A + ++ ++ E L +L A A E Sbjct: 99 YYALGYSLGMMGENQG-AAAAYRQAIRLNHRNAQAYEGLAVIL----ARL-GDPQGAIEA 152 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L++ A L + G++ A +A ++P + + + + A Sbjct: 153 YRSALRLAPGNWAAQKGLGVLLLQQGNIPEALSRLQQAAALAPGSASIQINLGMALLAAG 212 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + S +++ + A LL + A + + L + Sbjct: 213 DPSNGWQAIDRAAHLGQ----RDADLLQQVAELAAAANQPERAIQAYRRLITLQPERVAT 268 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + L+ QN +A I + +IN Sbjct: 269 YFSLGELLMQQNHPLEAAAIYRQA-------------------------------TQINP 297 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + E + K G +A +A+K+ Sbjct: 298 QDPEGFYRLGKALAAQGRRQEARNAYQVALKL 329 >gi|113478134|ref|YP_724195.1| sulfotransferase [Trichodesmium erythraeum IMS101] gi|110169182|gb|ABG53722.1| sulfotransferase [Trichodesmium erythraeum IMS101] Length = 676 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 74/182 (40%), Gaps = 7/182 (3%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 ++++I PD W + + + + +AI + + + +R +L + Sbjct: 167 QRSIEIKPDLCWSYQHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLL----ADALV 222 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 +KG++ + + +++++L + + +C + + +++ +A +I + K+NP+ Sbjct: 223 EKGEIDGAIPNYLKAIQLNPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPNAFWLW 282 Query: 298 IYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 Y + + + + I + + ++ D+A + A++I Sbjct: 283 TYLGNALVKQGDLETAITCYQKAISIQPNISKIYQFLGDAFVQQQKWDEAAFAYLRAIEI 342 Query: 355 AP 356 P Sbjct: 343 NP 344 >gi|119570530|gb|EAW50145.1| interferon-induced protein with tetratricopeptide repeats 2 [Homo sapiens] Length = 448 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 67/218 (30%), Gaps = 33/218 (15%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW---SRAITFLNQKKKNAKEWNRNRA 226 A+ KAL+ P P T + W AI L Q + + + Sbjct: 130 NERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 189 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L + + + E+L+ AAK +++ KA +L+K Sbjct: 190 LLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKA 249 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + P H +I Y + K + + + + + ++ I Sbjct: 250 LEYIPNNAYLHCQIGCCY----------RAKVFQVM-NLRENGMYGKRKLLEL------I 292 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQI-------EQAN 371 A A A + + +LA + E+A Sbjct: 293 GHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAE 330 >gi|21226201|ref|NP_632123.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] gi|20904433|gb|AAM29795.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1] Length = 205 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 8/157 (5%) Query: 137 NIAHEKLE-MMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + A E +L P Y + R + YA AL+I P+ Sbjct: 18 DKAEEVYRRALLLDPDHVESHCGYGILLN-RRGQKTEAGLHYAR-ALEIDPEHVESNFRY 75 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + E A T+ K E ++ L + + A G + + +LK Sbjct: 76 ARLLEEKGEPIEAETYYIVALKADPESSK----LHLYYARLLAQHGLIHGARVHFRYALK 131 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A A+ L + +AEV +K ++NP Sbjct: 132 ISPEDVEAHCEYARLLARFGHRHEAEVQYKKALELNP 168 >gi|115352910|ref|YP_774749.1| hypothetical protein Bamb_2859 [Burkholderia ambifaria AMMD] gi|172061758|ref|YP_001809410.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6] gi|115282898|gb|ABI88415.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria AMMD] gi|171994275|gb|ACB65194.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MC40-6] Length = 607 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + A +A++ V + + L KN + NR A L IAR Sbjct: 169 ARELARATGETRGPAILALQALL---VRGSDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D + ++L++ + + A++ L +A I V + Sbjct: 224 --QQLAVDDKEGAARSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D A A Sbjct: 278 PKSRDGRLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIRIQQKKLDDASAY 337 Query: 348 AMLAMKIAPRKE------IFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ ++ LAQI N + W Sbjct: 338 LKQYVQLGDKQSNLDVGQGYIYLAQI-SIEQGNDAQASQWLDK 379 Score = 39.1 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 92/276 (33%), Gaps = 26/276 (9%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ A A + + + + ++ + + + A ML Sbjct: 120 IALGAQ--SPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQP----MLARELA 173 Query: 153 REFA-VYS---LYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 R L ++ R D L + P A+ +Q + + Sbjct: 174 RATGETRGPAILALQALLVRGSDRVGGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKEG 233 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q + ++ L+ + A++ IAS+ ++ + + Sbjct: 234 AARSLKQALQIRPDY---LPAALMLSQMGPAERAAGIASFEKYVQQNPKSRD---GRLAL 287 Query: 267 AKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEI 320 ++ ++ ++ A+ E + K +P P +A + ++ LK+ ++L + Sbjct: 288 SQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIRIQQKKLDDASAYLKQYVQLGDK 347 Query: 321 NKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + +++I++E G+ QA + Sbjct: 348 QSNLDVGQGYIYLAQISIEQGNDAQASQWLDKVDQT 383 >gi|67900920|ref|XP_680716.1| hypothetical protein AN7447.2 [Aspergillus nidulans FGSC A4] gi|40742837|gb|EAA62027.1| hypothetical protein AN7447.2 [Aspergillus nidulans FGSC A4] gi|259483750|tpe|CBF79397.1| TPA: mRNA splicing factor (Prp1/Zer1), putative (AFU_orthologue; AFUA_2G06070) [Aspergillus nidulans FGSC A4] Length = 941 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 42/295 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ER + +++ + P + E + L E + G+++ A+R +A + + Sbjct: 581 AADLERNHGTKEALWQVLEKAVEACPQSEELWLQ-LAKEKWQSGEIDDARRVLGRAFNQN 639 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---- 240 P+ + A V+ A++ +A L ++ A + R L N D Sbjct: 640 PNNEDIWLAAVKLEADAQQTDQARELLATARREAGTDRVWIKSVAFERQLGNVDDALDLV 699 Query: 241 -------------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + C S+ + A++ Sbjct: 700 NQGLQLYPKADKLWMMKGQIYESQNKLPQAREAYGTGTRACPKSVALWLLASRLEEKAGA 759 Query: 276 KRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSK 333 +A +L++ P+ PE+ + E + +A L +E S ++ S+ Sbjct: 760 VVRARSVLDRARLAVPNSPELWTESVRV--ERRANNIPQAKVLMARALQEVPSSGLLWSE 817 Query: 334 I--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 LE S +A + K+ +F+ +A+I +K + W + A+ Sbjct: 818 SIWHLEPRSQRKARS-LEAIKKVDNDPILFITVARIFWGERR-LEKAMTWFEKAI 870 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 9/151 (5%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + +G + +L++ N + AA + K +LEK + P Sbjct: 548 AKASISRGKYETARAIYAYALRVFVNRRSIWVAAADLERNHGTKEALWQVLEKAVEACPQ 607 Query: 293 PE-----IA-NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 E +A + ++ L RA N + + + K+ + DQA Sbjct: 608 SEELWLQLAKEKWQSGEIDDARRVLGRA---FNQNPNNEDIWLAAVKLEADAQQTDQARE 664 Query: 347 KAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 A + A +++ E+ + D Sbjct: 665 LLATARREAGTDRVWIKSVAFERQLGNVDDA 695 >gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 261 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 14/195 (7%) Query: 131 LAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 ++ Y A E E + P + + R A + + + I P+ Sbjct: 35 FSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRR--YEEAIQAFDEVIRIDPELA 92 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 E+ AI L+Q E + + +G+ + Sbjct: 93 SAWSYKGGALHELGEYDEAIVALDQAIGLEPE----NGSIWSLKGSALYFQGEYDEALTA 148 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN-----IYTHL 302 E+++L +S +A A L Q ++A ++++ ++ P +P + ++ Sbjct: 149 IEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRLE 208 Query: 303 LSENTVGKLKRALRL 317 + ++ L RA++L Sbjct: 209 RYDESLEALDRAIQL 223 >gi|330840509|ref|XP_003292257.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum] gi|325077520|gb|EGC31227.1| hypothetical protein DICPUDRAFT_50293 [Dictyostelium purpureum] Length = 981 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 69/228 (30%), Gaps = 18/228 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + N A E + +L++ A+ L ++ A +A ++P P V Sbjct: 220 GRNNKAKEAFKRVLELDRDNVEAMIGLSLVLMNDNQIDEAMNLILEAYQLAPTNPIVLNH 279 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Y E+ + + L N + + +A + +++ Sbjct: 280 LANHYFYRGEFQK-VHTLGIAALNNTDVSHIKAESSYLVGKALHATQRWSEALQFYHQAV 338 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHL----LS 304 + +A + I KA E + P+ + ++Y H S Sbjct: 339 LKNPDFYLAQFGLGQIYIHNEDFDKAISCFENVLAKQPNNYETLQILGSLYKHGSLYKNS 398 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK--------IALEMGSIDQA 344 NT + EIN + +++ ALE A Sbjct: 399 MNTATAANVLKKAIEINPNDYNNWFELAQILEISEVGAALEAYEKGLA 446 >gi|302766433|ref|XP_002966637.1| hypothetical protein SELMODRAFT_168306 [Selaginella moellendorffii] gi|300166057|gb|EFJ32664.1| hypothetical protein SELMODRAFT_168306 [Selaginella moellendorffii] Length = 564 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 9/141 (6%) Query: 160 LYFES-CRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVLAKEWSRAITFLN 212 L ++ G A +A + P V V + ++ +A F Sbjct: 288 LLAQADMAQGRFEEAVAITERAARLDPQNFEVSSLLRKARTVSKARAAGNDFFKAAKFFE 347 Query: 213 Q--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 E + AILL R+ + G + D +L++ + A + A S Sbjct: 348 ACAAYTEGLELDPANAILLCNRAASRSKLGQWEKTLEDCNAALQVQPKYMKALLRRAHSY 407 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 + A E I + +P Sbjct: 408 AKLERWEDAARDYEAIRREHP 428 >gi|281412533|ref|YP_003346612.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila RKU-10] gi|281373636|gb|ADA67198.1| Tetratricopeptide TPR_2 repeat protein [Thermotoga naphthophila RKU-10] Length = 357 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 85/221 (38%), Gaps = 13/221 (5%) Query: 136 YNIAHEKLEMMLQIPATREFA--VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y+ AH+ ++ ML I A + L E G + +Y KA++I P Sbjct: 113 YDTAHDIIKFMLDIDENYAPAYELKGSLLVE---QGKIEEGIKYLDKAVEIDPWLVQAYA 169 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ + + ++ +AI + ++ E+N N I + + + Sbjct: 170 SLGEAHYNLGDYEKAIHYWEREL----EYNPNDKITYFMITEAYHEINRKDLAAKTLERL 225 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVG 309 LK+ ++I A ++ + KA+ + EKI P +P + L Sbjct: 226 LKIDPDNIPALYQLSQLYRDLGNEEKAKEMEEKIMNCKPKYPTELEPWARVMLKHGRYKE 285 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ ++ E + + + +++ +++G ID+A Sbjct: 286 VVEELEKIVESSPLNTLARLLLVVPYVKLGQIDKAREILED 326 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 7/134 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L +LE AD+ ++ L + +N A L+ Q K + L+K + Sbjct: 100 LYDLALEYADRNFYDTAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKYLDKAVE 159 Query: 289 VNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ P + Y L + + R E N + ++++ E+ D Sbjct: 160 ID--PWLVQAYASLGEAHYNLGDYEKAIHYWERELEYNPNDKITYFMITEAYHEINRKDL 217 Query: 344 AHAKAMLAMKIAPR 357 A +KI P Sbjct: 218 AAKTLERLLKIDPD 231 >gi|28564904|gb|AAO32536.1| TOM70 [Naumovia castellii] Length = 590 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 72/241 (29%), Gaps = 12/241 (4%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 +Y +Y Q+ +QY A E + ++ F L S R Sbjct: 355 ANYEKAMKLDDKNAALYYHRGQMYFITQQYEKAGEDFDKAKELDPENIFPYIQLACLSYR 414 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRN 224 + + ++A P++ V + ++ A+ + + ++ Sbjct: 415 ENKFDDCETLFSEARRKFPNSSEVPNFYAEILADKGDFDAALKEYERAIELEKKQDAVHV 474 Query: 225 RAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 L+ ++ + + + E++K S A I + + Q +A Sbjct: 475 GIAPLVGKATLLVRTPTVENFVEATSLLEEAVKEDPRSEQAKISLGQLKLQQEDIDEAIE 534 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + E +A + L T + + + + + + + + AL Sbjct: 535 LFESAAT------LARTFEEKLQATTFAEAAKIQKRIRADPKMS-AKIQETIAALRASDF 587 Query: 342 D 342 Sbjct: 588 A 588 >gi|312375518|gb|EFR22878.1| hypothetical protein AND_14066 [Anopheles darlingi] Length = 1188 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 70/249 (28%), Gaps = 53/249 (21%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q AL + +A + + +P A E + G+ + A Sbjct: 603 AQAALDALNFQVARDAYVRVRNLPWLELIAE---LRERQKRGETSKEVLLAE-------- 651 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 Y A + A + N+K + + + E +G Sbjct: 652 ----------AYAFAGRFKEAGRLYQKSGSNSKALAMYSDLRMFDLAQEFLKEGSAADKK 701 Query: 247 HDA-IESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHL-L 303 + C + AA+ L+S + +A I+ E+ W A++ + Sbjct: 702 ELIRRRAEWACSVHEPRA--AAELLLSAGESERAIEIVAEQGW--------ADVLLDIGR 751 Query: 304 SENTVGK---------LKRALRLEEINKESVESLVIVSK------IALEMGSIDQAHAKA 348 + L+R L + E + + + +E +A A Sbjct: 752 RLAATERAPLELIAGHLRRLKAL----PLAAEIFRKLGEEEQVVQLHVEARDWPEAFRLA 807 Query: 349 MLAMKIAPR 357 K+ P Sbjct: 808 EHLPKVLPS 816 >gi|300935380|ref|ZP_07150379.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] gi|300459410|gb|EFK22903.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] Length = 389 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 62/281 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361 + L + I +A + A ++ P +F Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318 >gi|197123572|ref|YP_002135523.1| hypothetical protein AnaeK_3173 [Anaeromyxobacter sp. K] gi|196173421|gb|ACG74394.1| TPR repeat-containing protein [Anaeromyxobacter sp. K] Length = 697 Score = 45.7 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 39/136 (28%), Gaps = 1/136 (0%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 N+ + A A E+ +L AV +L + G + Sbjct: 518 AVALAPNDAASRFALGRALHAAGDLAGAVEEYRAVLARQDRHRLAVNNLAVAYAQAGRME 577 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LI 230 A + +A + PD P + + + + A + A A+L Sbjct: 578 LAIEHFRRAAALDPDDPEPAVNLGRALLTTGDAGGARDASEAALRTAPRHPGAHAVLGGA 637 Query: 231 ARSLENADKGDMIASY 246 +++ A + Sbjct: 638 YLAMDRAAPAAEHLAL 653 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 64/217 (29%), Gaps = 23/217 (10%) Query: 158 YSLYFESCRIGDLNSAQRYAT------------KALDISPDAPWVTEAVVQQYVLAKEWS 205 L + + + + +A A +P P + E + Sbjct: 416 RGLMAVALGVAAVLAVITFARNEVWADDVRLWSDAAVKAPANPRTHGNLGLALAQRGEVA 475 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 R + ++ + ++ + + + +G ++ + ++ L N + Sbjct: 476 RGMAEIDVALRLKPDFYQ----AHTNKGVLLLQQGQLVPALEHLRYAVALAPNDAASRFA 531 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEI 320 ++L + A + H +A Y ++ R + Sbjct: 532 LGRALHAAGDLAGAVEEYRAVLARQDRHRLAVNNLAVAYAQAGRMELA--IEHFRRAAAL 589 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + E V + + L G A + A++ APR Sbjct: 590 DPDDPEPAVNLGRALLTTGDAGGARDASEAALRTAPR 626 >gi|302792679|ref|XP_002978105.1| hypothetical protein SELMODRAFT_176812 [Selaginella moellendorffii] gi|300154126|gb|EFJ20762.1| hypothetical protein SELMODRAFT_176812 [Selaginella moellendorffii] Length = 564 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 9/141 (6%) Query: 160 LYFES-CRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVLAKEWSRAITFLN 212 L ++ G A +A + P V V + ++ +A F Sbjct: 288 LLAQADMAQGRFEEAVAITERAARLDPQNFEVSSLLRKARTVSKARAAGNDFFKAAKFFE 347 Query: 213 Q--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 E + AILL R+ + G + D +L++ + A + A S Sbjct: 348 ACAAYTEGLELDPANAILLCNRAASRSKLGQWEKTLEDCNAALQVQPKYMKALLRRAHSY 407 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 + A E I + +P Sbjct: 408 AKLERWEDAARDYEAIRREHP 428 >gi|218189598|gb|EEC72025.1| hypothetical protein OsI_04909 [Oryza sativa Indica Group] Length = 890 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 69/208 (33%), Gaps = 23/208 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + +S R GD +A + +P + Y +E+ I K + A Sbjct: 58 IARQSYRAGDYKAALEHCNAVYRANPRLLENLLLLGAVYYQLREFDMCI----AKNEEAV 113 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N + + +KGD+ + + +++L A A + + +A Sbjct: 114 AIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQA 173 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV---------- 329 + +NPH +A+ Y +L LK A L + Sbjct: 174 AECCHQALALNPH--LADAYCNL-----GDVLK-AQGLYREAYSHYLDALNIKPTFANAW 225 Query: 330 -IVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + ++ G ++A A+K P Sbjct: 226 NNIAGLLMQWGDFNKAAVYYKEAIKCNP 253 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 14/188 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD+++A ++ A+ + P + Y S+A +Q + Sbjct: 131 REKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNP--HLA 188 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + L+ +G +Y +++L + A A L+ KA V + Sbjct: 189 DAYCNLGDVLK--AQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAAVYYK 246 Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIAL 336 + K NP H + N+Y ++ + E+ + V + Sbjct: 247 EAIKCNPAFYDAHLNLGNLYK--VTGMRQDAIVCFQNAARAKPENAVAYVFSGNLGNAYH 304 Query: 337 EMGSIDQA 344 E G +D A Sbjct: 305 EQGQLDLA 312 >gi|37521958|ref|NP_925335.1| hypothetical protein glr2389 [Gloeobacter violaceus PCC 7421] gi|35212957|dbj|BAC90330.1| glr2389 [Gloeobacter violaceus PCC 7421] Length = 783 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 43/105 (40%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + Y A + + L+ T + + +GD +A+ KAL + P P Sbjct: 667 AELRKDYKQALQFYQRHLKRNPTDAESHADIGRCYRLLGDPANAKASLAKALQVIPALPE 726 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + + + + S A+ + K + +++ +L+ A++L Sbjct: 727 AHYELAEIALAEGDRSTALKEIQYTLKVLEGADQSDKLLIKAKAL 771 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 76/273 (27%), Gaps = 57/273 (20%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + Q+ A + L + A L + G+ A + AL S Sbjct: 475 MADTYRLQGQFEQARSLYQQSLALDDNNTGAQLGLASLASSTGEFAGALEFNRLALANSR 534 Query: 186 DAPWVTEA---VVQQYVLAKEWSRAI---------------TFLNQK--KKNAKEWNRNR 225 + A ++ Y L +W + + + LNQ + + Sbjct: 535 TSDQKENAYANLLTHYSLRHQWQKVVPLIPQFLTTNNGLINSLLNQAFILDSYVLVGQQD 594 Query: 226 AILLIARSLENADKGDMI-------------ASYHDAIESLKLCDNSIMASICAAKS--- 269 + ++ + + DA + L I A++ Sbjct: 595 MAFAALKRMQAQVGSSPLLATFVQMGYLRVYLALEDAARAEPLIPQ-IEATLHRYSLDQL 653 Query: 270 --LISQNKKRKAEVILEKIWK----------------VNPHPEIANIYTHLLSENTVGKL 311 I ++R L K +K H +I Y LL + K Sbjct: 654 IDAIELERRRGGVAELRKDYKQALQFYQRHLKRNPTDAESHADIGRCY-RLLGDPANAKA 712 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 A L+ I E+ +++IAL G A Sbjct: 713 SLAKALQVI-PALPEAHYELAEIALAEGDRSTA 744 >gi|145608888|ref|XP_369777.2| hypothetical protein MGG_06292 [Magnaporthe oryzae 70-15] gi|145016312|gb|EDK00802.1| hypothetical protein MGG_06292 [Magnaporthe oryzae 70-15] Length = 840 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 38/281 (13%), Positives = 93/281 (33%), Gaps = 23/281 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L TG ++++ + A + S + + H L ++ Q +Y A + + Sbjct: 516 LGTGYLALSQYQCSEAVQAFSTIPRAHVDTPWVLAHIGRAQYEQT--KYAEAEASFKRLR 573 Query: 148 QIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + R ++ L E A A + +DI+ +P A+ + L Sbjct: 574 TLAPNRLEDMEVYSTVLWHLKKE-------TEASFLAHELVDIAWHSPHAWCALGNAWSL 626 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A + +A+ + + ++ A + E+ + + ++ Sbjct: 627 ASDREQALRCFKRATQLDAKF----AYAYTLQGHEHFVSEEYDKALTSYRHAIAADRRHY 682 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT---VGKLKRALRL 317 A + KA ++P + E V L+ + Sbjct: 683 NAYYGIGRVYEKLGNYDKAYTHFHAASVIHPTNAVLICCIGTALEKQKQVVQALQFFTKA 742 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E+ + ++ + ++ L +G + +A + M+ +AP + Sbjct: 743 TELAPRAAQTRFMKARALLALGQLHEAQKELMILKDLAPDE 783 >gi|145489287|ref|XP_001430646.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124397745|emb|CAK63248.1| unnamed protein product [Paramecium tetraurelia] Length = 663 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 16/249 (6%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAV----YSLYFESCRIGDLNSAQRYATKALD 182 + + + +Y A + + QI TR + L+ + A L Sbjct: 375 ARSFMDQVKYTDAERVWKELRQIEPTRLEGMDYYSSCLWHLKKQSELTY----LAHSCLQ 430 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 IS AP A+ + L KE +I F + + K++ + E + + Sbjct: 431 ISTQAPETWIAIGNCFSLTKEIDNSIKFFGRAIQLRKDY----SYAYTLSGHEFSQNENF 486 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN--IY 299 + + L A +K A + ++NP +P + Sbjct: 487 QQAKKSYEAATSLDQRQYNAWWGQGNMYYKTDKYEDAIKCFIQAIRINPNNPVLPTFLAM 546 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RK 358 ++ LK + E ++ + + + ++M +QA ++ + P Sbjct: 547 SYAAKGEHNDALKYFEQSERLDPMNGLNKYQKANSLIKMDKYEQALSELQTLSQFIPKEA 606 Query: 359 EIFLLLAQI 367 I++L+ +I Sbjct: 607 AIYILMGRI 615 >gi|158522428|ref|YP_001530298.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 762 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 45/365 (12%), Positives = 102/365 (27%), Gaps = 90/365 (24%) Query: 27 DVSITWGNRLYRTSPFVILSILYF-------------FLFAWILLFAVSRF----FLSCP 69 +++ + +R Y S VI ++ + FL A LL+ + + Sbjct: 353 GLALVFEHRTYLPSVLVIAALAWAAITYIRPRPLAIGFLCAVTLLWGFWTYQRNAIWADE 412 Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 L+ + ++ + LAR L Sbjct: 413 VALWRDVTEK-------------------SPTLAR---------------PWSNL--GMA 436 Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKA 180 A + + + P + E+ +G A ++ +A Sbjct: 437 LQIAGNSEAALQAFQKAIALDPN---------HMEAHNNSGFILRELGRPKEAIKFFRRA 487 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L+I+P + + K+ ++A T Q + +++ L + +G Sbjct: 488 LEINPAYADAHYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSKAHNNL----GVILMQEG 543 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 D A+ +LK A Q +A +K +P Y Sbjct: 544 DHEAAVAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADP------AYA 597 Query: 301 HLLSENTVGK---------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + + ++ V+ ++++ G A ++ A Sbjct: 598 GAANNLARVRQTIEKHGPAITELKQMLHKTPNDVDLSCRLAQVYQAAGMRYGAISQYQKA 657 Query: 352 MKIAP 356 + + P Sbjct: 658 LALQP 662 Score = 43.4 bits (101), Expect = 0.098, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 63/170 (37%), Gaps = 13/170 (7%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + +L+ A G+ A+ +++ L N + A + L + ++A + ++ Sbjct: 433 LGMALQIA--GNSEAALQAFQKAIALDPNHMEAHNNSGFILRELGRPKEAIKFFRRALEI 490 Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 NP H + + L + + + +N ++ + I ++ G + A Sbjct: 491 NPAYADAHYNLGLAFFDLK-DMAQARTA-FEQTLRVNPLYSKAHNNLGVILMQEGDHEAA 548 Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 A A+K PR + + L I + + + AL A DP Sbjct: 549 VAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAA-SFFKKALTA--DPA 595 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 4/148 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 E + A + L+ A +L + + G+ + A + KAL P Sbjct: 542 EGDHEAAVAAYQRALKTDPRFAQAYNNLGIIAYQQGNPDQAASFFKKALTADPAYAGAAN 601 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + ++ AIT L Q N L + G + ++ Sbjct: 602 NLARVRQTIEKHGPAITELKQMLHKTP----NDVDLSCRLAQVYQAAGMRYGAISQYQKA 657 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAE 280 L L + + + KA Sbjct: 658 LALQPGHGPSLNALGVLYAAMGQPAKAV 685 >gi|45185361|ref|NP_983078.1| ABR131Wp [Ashbya gossypii ATCC 10895] gi|44981050|gb|AAS50902.1| ABR131Wp [Ashbya gossypii ATCC 10895] Length = 594 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 20/231 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A N A ++ S + + + + Q A + ++ A E +R + Sbjct: 359 AQNFEKALELDPKSSAAYY--HRAQMNFVIQQFDQAGKDFDKAKEC-------DPSRVYP 409 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--LNQK 214 L + R + + ++A P AP V + ++ A+ +K Sbjct: 410 YIQLACLAYREKKFDDCETLFSEARRRFPTAPEVPNFYAEILSDKGDFENALKEYDFARK 469 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDM---IASYHDAIESLKLCDNSIMASICAAKSLI 271 ++A+E L+ ++ A + + + + S A I A+ + Sbjct: 470 LEDAQEGIHVGVAPLVGKAALLARQPSASNFAEATKLFELACEKDPRSEQAKIGLAQLKL 529 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 Q + +A + E +++ + L T + + + + Sbjct: 530 QQEEVDEAIKLFEAA------ADLSRAFEEKLQATTFAEAAKIQKRIRADP 574 >gi|261194986|ref|XP_002623897.1| pre-mRNA splicing factor prp1 [Ajellomyces dermatitidis SLH14081] gi|239587769|gb|EEQ70412.1| pre-mRNA splicing factor prp1 [Ajellomyces dermatitidis SLH14081] gi|239610736|gb|EEQ87723.1| pre-mRNA splicing factor prp1 [Ajellomyces dermatitidis ER-3] gi|327348822|gb|EGE77679.1| pre-mRNA-splicing factor [Ajellomyces dermatitidis ATCC 18188] Length = 941 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 120/335 (35%), Gaps = 47/335 (14%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---- 149 SIA AR +++Y + + A ER + +++ + Sbjct: 552 SIARGKYETARAIYAYALRVFVNKK----NIWLA-AADLERNHGTKESLWQLLDKAVEAC 606 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + + L E + G++++A+R +A + +PD + A V+ A + A Sbjct: 607 PQSESLWMQ-LAKEKWQAGEIDNARRVLGRAFNQNPDNEDIWLAAVKLEADANQTEHARE 665 Query: 210 FLNQKKKNAKE--------------WNRNRAILLIARSLEN---------------ADKG 240 L+ ++ A NR +A+ L+ + L+ ++ Sbjct: 666 LLSTARREAGTDRVWIKSVAFERQLGNREQALDLVNQGLQLYPKADKLWMMKGQIYEEQN 725 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + C S+ + A++ KA IL++ P+ A ++T Sbjct: 726 KYPQAREAYGTGTRACPKSVPLWLLASRLEEKAGVVVKARSILDRARLAV--PKNAELWT 783 Query: 301 H-LLSENTVGKLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAP 356 + E + +A L +E S ++ S+ LE + + + K+ Sbjct: 784 ETVRVERRANNINQAKVLMAKALQEVPNSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDN 842 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +F+ +A+I DK + W + A+ + D Sbjct: 843 DPILFVTVARIFWGERR-LDKAMTWFEKAIVSNSD 876 >gi|255538832|ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis] gi|223551182|gb|EEF52668.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis] Length = 804 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 68/223 (30%), Gaps = 36/223 (16%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 SA Y +A + P + + E+ A+ L + ++ A +A Sbjct: 331 SACEYYREAAILCPTHYRALKLLGSALFGVGEYMAAVKALEEAIFMKPDY--ADAHCDLA 388 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIW 287 +L G + +++ L + A + + ++A +L +W Sbjct: 389 SALHAM--GQDEKAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYSRVL-AVW 445 Query: 288 KVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKESV------------------- 325 + ++ + L +E T LK AL++ + Sbjct: 446 PNHWRAQLNKAVSLLGAGETEETKKALKEALKMTNRVELHDAISHLKQLQKKKVKGSNGV 505 Query: 326 ---ESLVIVSKIA--LEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 E IV +++ A A+++ + I L Sbjct: 506 ANGEGAFIVVELSKFKTASEKTTARQDLANALQVRAFQRITRL 548 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 11/164 (6%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIA----RSLENADKGDMIASYHDAIESLKLCD 257 + A + A+ A LL + +G ++++ E+ LC Sbjct: 285 GRFKEAKEEFLLALEAAEAGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCP 344 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 A +L + A LE+ + P H ++A+ H + ++ ++ Sbjct: 345 THYRALKLLGSALFGVGEYMAAVKALEEAIFMKPDYADAHCDLASA-LHAMGQDEKA-IE 402 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ V++L + + +++G +A + + P Sbjct: 403 VFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYSRVLAVWP 446 >gi|157812758|gb|ABV81124.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Limulus polyphemus] Length = 290 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALHLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G ++ A+ AL + P + A + + Sbjct: 26 LANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E+ A + +G + + E++++ A +L + A Sbjct: 86 EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N + ++ E ++ ++ Sbjct: 142 LQCYTRAIQINPGFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 66/215 (30%), Gaps = 22/215 (10%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q + A E L + T ++ +L G + A R KAL++ P+ Sbjct: 27 ANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + + A + GD+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301 ++++ A A +A K+ P P+ +A+ Sbjct: 143 QCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTALKLKPEFPDAYCNLAH-CLQ 201 Query: 302 LLSE--NTVGKLKRA----------LRLEEINKES 324 ++ + + ++K+ RL ++ Sbjct: 202 IVCDWTDYEARMKKLVSIVADQLEKNRLPSVHPHH 236 >gi|74316977|ref|YP_314717.1| tetratricopeptide repeat-containing protein [Thiobacillus denitrificans ATCC 25259] gi|74056472|gb|AAZ96912.1| putative N-acetylglucosaminyl transferase [Thiobacillus denitrificans ATCC 25259] Length = 394 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 39/313 (12%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFES------------CRIGDLNSAQRYATKAL 181 +++ A E +L+ + L E + G L+ A++ K L Sbjct: 84 GEFDRAIRMHEHLLEREYPQ--GHKGLAEEQRLRAMSELGQDYLKAGLLDRAEQVFGKLL 141 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKG 240 + S +++ YV K+W +AI +++ +K N + A +L + KG Sbjct: 142 ETS-QHGQARTHLLEIYVQEKDWQKAIDAARLLERDTSKPLNADIAHFYCELALLESAKG 200 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEI 295 + A+ ++L S+ A++ + + A W+ H + Sbjct: 201 NSDAAAAQLQQALAANRQSVRANLMTGDLHAAAGRHEAA----IAAWRLVETQSAGHMAL 256 Query: 296 -----ANIYTHLLSENTVGKLKRALRLEEINKESV-ESLVIVSKIALEMGSIDQAHAKAM 349 Y L ++ + + ++ E + A A Sbjct: 257 VVDRVLGSYRQL--GRVGEGVQWLRAFYARQPSHDVFNALYLAVSETEGAA--AARQLAR 312 Query: 350 LAMKIAPRKEIF--LLLAQIEQANSHNTDKIL-YWTQSALHAMPDPLWISD-DGYLSSVW 405 ++ P LL A+I A+ + + + A ++ + G+ + + Sbjct: 313 EELRRNPSLRTLDRLLEAEIVTADPEQRELLQVEKSLVASYSQRMMRYQCGSCGFKAKQF 372 Query: 406 LPLSPISKTLCYF 418 P F Sbjct: 373 FWRCPACGRWDSF 385 >gi|113476445|ref|YP_722506.1| sulfotransferase [Trichodesmium erythraeum IMS101] gi|110167493|gb|ABG52033.1| sulfotransferase [Trichodesmium erythraeum IMS101] Length = 832 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 21/241 (8%) Query: 126 EVQIALAERQYNIAHEK-LEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDI 183 E + L++ ++ A+ L+ + +P + E L++A + KA++ Sbjct: 14 EAEYYLSQGDFDKAYATSLQALELVPDFAPVSNTIGKIMEKI--DALDAAITWYKKAIEK 71 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ + YV +EW +A+ + K + A A + Sbjct: 72 QPNLAENHANLGSVYVKQQEWDQAVASYQKATKLEPNF----ASAYRALAEIYHQIDKPE 127 Query: 244 ASYHDAIESLKLCDNSIMASIC----AAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 + ++ L A+ K+L++ N+K++A E+ K NP H Sbjct: 128 LAASCQYKAFILKPEL--ATDLEYLNLGKTLLTYNRKKEAIACYEQSLKFNPNLYQAHHN 185 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + Y+ E + + ++N + S + K ++A + A+++ Sbjct: 186 LGEFYS--QEEKWQAAISSYQKAIKLNPKFSWSHHSLGKAFANTQQWEKAISSYQEALQL 243 Query: 355 A 355 Sbjct: 244 N 244 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 4/191 (2%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 LA L YL + L + A E L+ A ++L Sbjct: 127 ELAASCQYKAFILKPELATDLEYLNLGKTLLTYNRKKEAIACYEQSLKFNPNLYQAHHNL 186 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + +A KA+ ++P W ++ + + ++W +AI+ + + Sbjct: 187 GEFYSQEEKWQAAISSYQKAIKLNPKFSWSHHSLGKAFANTQQWEKAISSYQEALQ---- 242 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 N A+ + A+ +S++L + + A + + A Sbjct: 243 LNSQDAVTYHCLGDALVKHKQLDAAISAYQKSIELKPETWVVHHKLANIFQEKGELDAAI 302 Query: 281 VILEKIWKVNP 291 V K K+NP Sbjct: 303 VAYHKAIKLNP 313 Score = 43.4 bits (101), Expect = 0.098, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 49/136 (36%), Gaps = 7/136 (5%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ L + +GD +Y ++++L+L + S K + + A +K Sbjct: 8 ALKLNQEAEYYLSQGDFDKAYATSLQALELVPDFAPVSNTIGKIMEKIDALDAAITWYKK 67 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P H + ++Y + + + ++ + +++I ++ Sbjct: 68 AIEKQPNLAENHANLGSVYVKQQEWDQA--VASYQKATKLEPNFASAYRALAEIYHQIDK 125 Query: 341 IDQAHAKAMLAMKIAP 356 + A + A + P Sbjct: 126 PELAASCQYKAFILKP 141 >gi|242278757|ref|YP_002990886.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio salexigens DSM 2638] gi|242121651|gb|ACS79347.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio salexigens DSM 2638] Length = 811 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 7/129 (5%) Query: 131 LAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L+ P V L S + L+ A++Y KA + Sbjct: 659 QMLGSMDKAREAYEKCLELEPENVFSLVR-LGVLSEQDKGLDEAEQYYLKAAKLKGGDAL 717 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHD 248 + + + +A +L+Q N N A + + + G D + Sbjct: 718 SMRHLARISYSRGDMDKAREYLHQAL----NANHNDAAAMNMLARIYLESGEDPQVAEVL 773 Query: 249 AIESLKLCD 257 A +S L Sbjct: 774 ARQSAALKP 782 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 43/112 (38%), Gaps = 1/112 (0%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + ++ ++ L S GD++ A+ Y +AL+ + + + + Sbjct: 699 DEAEQYYLKAAKLKGGDALSMRHLARISYSRGDMDKAREYLHQALNANHNDAAAMNMLAR 758 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y+ + E + L ++ K + L A++LE +K + Sbjct: 759 IYLESGEDPQVAEVLARQSAALKPAKEQFWMTL-AKALEVQEKFEEAEQVRS 809 >gi|110597396|ref|ZP_01385683.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] gi|110340940|gb|EAT59411.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] Length = 1055 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 4/127 (3%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G+ +A KALD+ D ++ A+ +Q ++ A Sbjct: 129 QGEFKAALASFDKALDLKYDLAKAYYYKGNILHHLNQFGDALASFDQAIALKPDY----A 184 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 R L D+ ++ A+ ++KL + + + A +L+ + ++ + E Sbjct: 185 EAYANRGLVLKDRNELDAALASFGHAIKLQPDLVAPRVNKAITLLLKGNFKEGFELFEYR 244 Query: 287 WKVNPHP 293 WK +P Sbjct: 245 WKNEKYP 251 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 19/201 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEW 221 + G+L A+ + L I P + + K+ +A+ + +++ + Sbjct: 26 QQGELAQAETLYNEILTIQPKQADSLHMLGVIALQKKDHRKAVDLFGKAIDIYPRHSAFY 85 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N L R L+ A+ +++ L + A + L Q + + A Sbjct: 86 NNRGNALYELRQLD--------AALASFDQAIALKPDFADAYVNQGMVLYDQGEFKAALA 137 Query: 282 ILEKIWKVNPHPEIANIY---THLLSENTV--GKLKRALRLEEINKESVESLVIVSKIAL 336 +K + ++A Y ++L L + + + E+ + Sbjct: 138 SFDKALDLKY--DLAKAYYYKGNILHHLNQFGDALASFDQAIALKPDYAEAYANRGLVLK 195 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 + +D A A A+K+ P Sbjct: 196 DRNELDAALASFGHAIKLQPD 216 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 61/193 (31%), Gaps = 31/193 (16%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIA--------RSLE 235 D+PW A + + +W + L+ A + + + +L A ++L Sbjct: 492 DSPWYDSAKLYRQERTGDWEGVLQQLSADLITASTRLASSHPSNILTAAQLDLTFRQALT 551 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + + + + L + + A + + + + ++A ++ + ++ P+ Sbjct: 552 LHQQSKIAQAKVLYEQILAVSPKHVDALHLSGVAALQSREHQRAADLIGRAIVLS--PDN 609 Query: 296 ANIY------------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 A Y E+ + R E E+ E+ Sbjct: 610 ATFYSNRGIALKELGLLDAAVESYNNAIAR-------KPEYPEAYSNRGLALHELKKFTL 662 Query: 344 AHAKAMLAMKIAP 356 A A A+ + P Sbjct: 663 ALASFDKAITLKP 675 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 40/131 (30%), Gaps = 6/131 (4%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + A KA+ + P P + A+ ++ Sbjct: 650 RGLALHELKK--FTLALASFDKAITLKPAFPEALSNRGNTLQELNRFEEALDSYDRAIAL 707 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 +++ A L R L + + +++ L + A + A +L+ + + Sbjct: 708 KEDY----AEALSNRGLALQQLNRFDEALNSFEQAIALRADFADAWLNRALALLLKGNFQ 763 Query: 278 KAEVILEKIWK 288 + E W+ Sbjct: 764 SGWELYEWRWR 774 >gi|262304947|gb|ACY45066.1| acetylglucosaminyl-transferase [Acheta domesticus] Length = 288 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|88603649|ref|YP_503827.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88189111|gb|ABD42108.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 436 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 86/250 (34%), Gaps = 19/250 (7%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ + +RQY+ A E E L+ P +L +IG +SA ++ K Sbjct: 163 LKGRYLFEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALM----KIGGYHSAIQFFKKC 218 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL---IARSLENA 237 L I PD + Y + ++ AI + + + R + + E Sbjct: 219 LKIRPDYTAAWLLLGNSYKVLNQFDEAIDAYEEAMELDPGSTKYRKYIADVYLVMGKEAL 278 Query: 238 -DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +G + +++++ N I A + R A K+ +++ P+ Sbjct: 279 YKEGKPQEAIEYFDKTIRMIANHITAWFSKGVAYKKLGAYRNATACFLKVVEMD--PQNG 336 Query: 297 NIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + Y + + N ++ L + +++ V + +E G A A Sbjct: 337 HAYYEMAQILEKTGNNEEAIRCYLETIRCDPSHTDAMYKVGNLLMEGGDYKNAIAYFDRV 396 Query: 352 MKIAPRKEIF 361 + P + Sbjct: 397 LDKIPESSVA 406 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 39/293 (13%), Positives = 92/293 (31%), Gaps = 28/293 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 P A M + V + N+ + LE + H + L + + Sbjct: 81 ENPEALTMRASVLRLIALQNQDPMRCLEA--VEICNKTLKIHPEYGPALHEKGMALWTL- 137 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 G + A +A I P+ + + +++ AI + + Sbjct: 138 ---------GKRDEAMSLFEQAKKIHASYPYPWDLKGRYLFEKRQYHEAIEAYEEALEKK 188 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 LL + G ++ + LK+ + A + S N+ + Sbjct: 189 P----QDPDLLFSMGRALMKIGGYHSAIQFFKKCLKIRPDYTAAWLLLGNSYKVLNQFDE 244 Query: 279 AEVILEKIWKVNP-----HPEIANIYTHL------LSENTVGKLKRALRLEEINKESVES 327 A E+ +++P IA++Y + ++ + + + + Sbjct: 245 AIDAYEEAMELDPGSTKYRKYIADVYLVMGKEALYKEGKPQEAIEYFDKTIRMIANHITA 304 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKIL 379 ++G+ A A + +++ P+ + +AQI + +N + I Sbjct: 305 WFSKGVAYKKLGAYRNATACFLKVVEMDPQNGHAYYEMAQILEKTGNNEEAIR 357 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 73/206 (35%), Gaps = 16/206 (7%) Query: 170 LNSAQRYATKALDISPDAP--WVT--EAVVQQYVLAKEWSRAITFLNQKK---KNAKEWN 222 +A + + +++ P WV +A + + RA + E Sbjct: 31 YEAAVQTFNRGIELDRSHPGCWVGMGKAFLGL----GRYDRADDCFIRALDIDPENPEAL 86 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 RA +L +L+N D + + ++LK+ A +L + K+ +A + Sbjct: 87 TMRASVLRLIALQNQDPMRCLEAVEICNKTLKIHPEYGPALHEKGMALWTLGKRDEAMSL 146 Query: 283 LEKIWKVN---PHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E+ K++ P+P ++ Y ++ E + + L + + +++ Sbjct: 147 FEQAKKIHASYPYPWDLKGRYL-FEKRQYHEAIEAYEEALEKKPQDPDLLFSMGRALMKI 205 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLL 364 G A +KI P LL Sbjct: 206 GGYHSAIQFFKKCLKIRPDYTAAWLL 231 >gi|15607128|ref|NP_214510.1| hypothetical protein aq_2197 [Aquifex aeolicus VF5] gi|2984391|gb|AAC07909.1| hypothetical protein aq_2197 [Aquifex aeolicus VF5] Length = 162 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 6/135 (4%) Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L+ E+ + +GDL+ A K++D+ P A + Y + + AI + + Sbjct: 14 LFEEAYKYHMLGDLDKAIELYRKSIDVYPTA-EAWTFLGWAYSMRGNYEGAIEACKRAIE 72 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 ++ + +E + I A + + AK + Q K Sbjct: 73 IDPDFGNPYNDIGSYL-IELGKLDEAIEWLEKAKRAKRYEPRHYPYINL-AKVYMLQGKL 130 Query: 277 RKAEVILEKIWKVNP 291 +A +E+ K+ P Sbjct: 131 YEALREIEEAIKIKP 145 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 51/163 (31%), Gaps = 11/163 (6%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVYSLYFESCRIGDLN 171 + + E + A E + + T G+ Sbjct: 7 LKEQAMKLFEEAYKYHMLGDLDKAIELYRKSIDVYPTAEAWTFLGWAYSM-----RGNYE 61 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A +A++I PD + + + AI +L + K+ + R+ + + Sbjct: 62 GAIEACKRAIEIDPDFGNPYNDIGSYLIELGKLDEAIEWLEKAKRAKRYEPRHYPYINL- 120 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + +G + + + E++K+ + + + + L N Sbjct: 121 -AKVYMLQGKLYEALREIEEAIKIKPDYKPSHMLRHQILGMLN 162 >gi|42521721|ref|NP_967101.1| hypothetical protein Bd0075 [Bdellovibrio bacteriovorus HD100] gi|39574251|emb|CAE77755.1| conserved hypothetical protein with TPR-domain [Bdellovibrio bacteriovorus HD100] Length = 981 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 33/196 (16%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVV----------------------QQYVLAKEW 204 G+ A A KA ++P+ + + V+ QYV ++ Sbjct: 466 RGEKKKALEVAQKAFGLNPNNGELRQLVIRLGGTDKVKGDKGRNNELLYLGDQYVRQGDF 525 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A K A E + + + + +++K + A + Sbjct: 526 LAAQAEF----KAAFEADPKNGTAAMKAAKALWQLNQSFEAIEWLNKAIKAEPKLVSAYV 581 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEE 319 A + + A IL ++ P+ +A N G + ALR + Sbjct: 582 LQADYMSQRFDFIGALQILTNAMRIAPNNYEVLRGLAQ--LEFRKNNMPGTVNYALRAAK 639 Query: 320 INKESVESLVIVSKIA 335 +++ ++++K Sbjct: 640 AYDGDIDTYILLAKAN 655 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 89/269 (33%), Gaps = 26/269 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR----IGDLNSAQRYATKALDISPDAP 188 +Y A +E L+ + LY D +A Y KA + Sbjct: 321 AGRYKEAKGTIEATLEGSE-PFSLLPVLYDFKAELLAGEKDYVNAVPYYEKAAQLWEKWL 379 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS-YH 247 ++ + +++ A L + ++ + K D + + Sbjct: 380 HPQVSLAEALYHQGDFTTAAGIL-RNVLTKNPKHKEAKVFAGIVEYNGFKKSDTAYAFLN 438 Query: 248 DAIESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHL 302 +ES + I A ++ A+ + + +K+KA + +K + +NP+ E+ + L Sbjct: 439 SGLESKGRIPSLIEAEGYGAL--AEIFVLRGEKKKALEVAQKAFGLNPNNGELRQLVIRL 496 Query: 303 LSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + V K R L + + + G A A+ A + P+ Sbjct: 497 GGTDKVKGDKGRNNEL-----------LYLGDQYVRQGDFLAAQAEFKAAFEADPKNGTA 545 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMP 390 + A + + + + W A+ A P Sbjct: 546 AMKAAKALWQLNQSFEAIEWLNKAIKAEP 574 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 ++ +E +Y+ A + E + + P ++ + L +G + A + A + P Sbjct: 736 AEVYKSEDRYSQAKDIYEKVTEADPRNKKAWL-GLGESEKALGLNDKALKAFLSAAVLDP 794 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + Y+ + AI + ++ + R GD + Sbjct: 795 TDGEALFQAGKLYLETSRFEEAIQQFKRVQRLNANYPR----THYYIGKAAFASGDFATA 850 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + KL N + I AA+ ++ + + K+ P Sbjct: 851 LEASKSEKKLNPNVADSYILAAEVFTARRQYAECAAEYSTAMKLRP 896 >gi|262276406|ref|ZP_06054215.1| TPR domain protein [Grimontia hollisae CIP 101886] gi|262220214|gb|EEY71530.1| TPR domain protein [Grimontia hollisae CIP 101886] Length = 699 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 68/233 (29%), Gaps = 22/233 (9%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ + L +PDA V + + W A+ K +A A +L + Sbjct: 33 AREVFEQILSHAPDALPVLQVLAVLDSEDGAWQDAL----NKLNHALSVEPGNASILFDK 88 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI---SQNKKRKAEV-------- 281 + A G + L + + + + R+ Sbjct: 89 AALLAQHGMNREALDIVDALLGAAPDHQELLAMRQQLTAAIGKRGESRRTAKQFIQTRAH 148 Query: 282 ---ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++E + + + S N + + + ++ +L+ ++K+ ++ Sbjct: 149 KNAVIEAEVQET----LTLANQMVASGNLEQAKQLFNAVISVAGDNPAALLGLAKLYIDE 204 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + A ++ ++L + + L A PD Sbjct: 205 EKFGLARQNLLRAFNEDDAEKEVVVLLSHSAIKIEDYKAAREHARFGLSAWPD 257 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 72/238 (30%), Gaps = 22/238 (9%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A E E +L + L G A AL + P + Sbjct: 32 EAREVFEQILSHAPDALPVLQVLAVLDSEDGAWQDALNKLNHALSVEPGNASILFDKAAL 91 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-----S 252 A+ ++ A + LL R A G S A + + Sbjct: 92 LAQHGMNREALDIVDALLGAAPDHQE----LLAMRQQLTAAIGKRGESRRTAKQFIQTRA 147 Query: 253 LKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSE 305 K I A ++ A +++ +A+ + + V NP + ++ E Sbjct: 148 HKNA--VIEAEVQETLTLANQMVASGNLEQAKQLFNAVISVAGDNPAALLGLAKLYIDEE 205 Query: 306 NTVGKLKRALRLEEINKESVESLV--IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L R L N++ E V ++S A+++ A A + P + +F Sbjct: 206 KFG--LARQNLLRAFNEDDAEKEVVVLLSHSAIKIEDYKAAREHARFGLSAWPDEPLF 261 >gi|222619750|gb|EEE55882.1| hypothetical protein OsJ_04532 [Oryza sativa Japonica Group] Length = 885 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 69/208 (33%), Gaps = 23/208 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + +S R GD +A + +P + Y +E+ I K + A Sbjct: 42 IARQSYRAGDYKAALEHCNAVYRANPRLLENLLLLGAVYYQLREFDMCI----AKNEEAV 97 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N + + +KGD+ + + +++L A A + + +A Sbjct: 98 AIQPNCPECFNSIANAWREKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQA 157 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV---------- 329 + +NPH +A+ Y +L LK A L + Sbjct: 158 AECCHQALALNPH--LADAYCNL-----GDVLK-AQGLYREAYSHYLDALNIKPTFANAW 209 Query: 330 -IVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + ++ G ++A A+K P Sbjct: 210 NNIAGLLMQWGDFNKAALYYKEAIKCNP 237 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 11/185 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD+++A ++ A+ + P + Y S+A +Q + Sbjct: 115 REKGDVDNAIQFYVHAVQLRPTFADAWTNLANAYTRKGNLSQAAECCHQALALNP--HLA 172 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + L+ +G +Y +++L + A A L+ KA + + Sbjct: 173 DAYCNLGDVLK--AQGLYREAYSHYLDALNIKPTFANAWNNIAGLLMQWGDFNKAALYYK 230 Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + K NP H + N+Y ++ + E+ + + E G Sbjct: 231 EAIKCNPAFYDAHLNLGNLYK--VTGMRQDAIVCFQNAARAKPENAVAYGNLGNAYHEQG 288 Query: 340 SIDQA 344 +D A Sbjct: 289 QLDLA 293 >gi|242018035|ref|XP_002429488.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus corporis] gi|212514426|gb|EEB16750.1| tpr repeat nuclear phosphoprotein, putative [Pediculus humanus corporis] Length = 1217 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 83/231 (35%), Gaps = 12/231 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWV 190 A E LQ+ A+ L I D+ + + +KA I P V Sbjct: 217 GNLEKARLAFERALQLDPQCVGALVGLAILKLNIQEPEDIRAGVQMLSKAYTIDMSNPMV 276 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + K++++ + L + E RA + + D ++ Sbjct: 277 LNHLANHFFFKKDYNK-VQHLALHAFHNTENEAMRAESCYQLARAFHVQADYDQAFQYYY 335 Query: 251 ESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLS 304 ++ + + ++ + I + A EK+ K P + ++Y + S Sbjct: 336 QATQFAPSAFVLPHYGLGQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSLYANSTS 395 Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ K ++ E E VE+ + +++I LE + A + +A+KI Sbjct: 396 QSKREIAKNHLKKVTEQFPEDVEAWIELAQI-LEQSDVQGALSAYGMAIKI 445 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 89/250 (35%), Gaps = 31/250 (12%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 Y+ A + + +L+ L + G ++ A + AL I+ D P + Sbjct: 518 YDRAEKLYKDILREHPNYVDCYLRLGCMARDKGQISEASDWFKDALQINNDHPDAWSLLG 577 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIA 244 ++ EW + KN+ + +++ + R E +K Sbjct: 578 NLHLAQMEWGPGQKKFERILKNSSTSSDAYSLIALGNVWLQTLHQPTRDKER-EKRHQER 636 Query: 245 SYHDAIESLKLCDNSIMAS-----ICAAKSLISQNK-----KRKAEVILEKIWKVNPHPE 294 + + L+ +I A+ + A K I++ + R+A +W Sbjct: 637 ALAMYKQVLRNDPRNIWAANGIGAVLAHKGAINEARDVFAQVREATADFCDVWLN----- 691 Query: 295 IANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 IA+IY + ++ + + VE L +++ + G + +A + A Sbjct: 692 IAHIYVEQKQYISAIQMYENCLRKFYKY--PHVEVLQYLARAYFKAGKLKEAKMTLLKAR 749 Query: 353 KIAPRKEIFL 362 ++AP+ + L Sbjct: 750 RVAPQDTVLL 759 >gi|156042368|ref|XP_001587741.1| hypothetical protein SS1G_10981 [Sclerotinia sclerotiorum 1980] gi|154695368|gb|EDN95106.1| hypothetical protein SS1G_10981 [Sclerotinia sclerotiorum 1980 UF-70] Length = 528 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 22/191 (11%), Positives = 57/191 (29%), Gaps = 9/191 (4%) Query: 108 SYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFES 164 S +S + + LL LA+ + N A ++ + + + Sbjct: 24 SALSANDIPSDTPISSLLASANAHLAKGETNDALTYYDIAIARDPSNYLSHFRRG--AAY 81 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKE 220 +G + A + K L I P + +W A + + + Sbjct: 82 LSLGRMAQAAQDFDKVLTIKPGHEPALSQRAKIRAKNGDWENAKQDYLALGASQGAEEEL 141 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 N A + +++ + A ++ + + A + + ++ Sbjct: 142 ANLIEAQGAASLAMDAEKSQNWEECVTQAGAAIMVASKVVSLRKTRAHCRFERGEVQEGM 201 Query: 281 VILEKIWKVNP 291 L+ + ++ P Sbjct: 202 SDLKHVLQMQP 212 >gi|149062745|gb|EDM13168.1| rCG47511 [Rattus norvegicus] Length = 453 Score = 45.7 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 87/236 (36%), Gaps = 29/236 (12%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + + + P + L + +G+ + A+ + +AL + +V + + Sbjct: 188 RKAVRLNPEDPHLKVL----LALKLQDLGEQDEAETHIEEALSSTSCQSYVFRYAAKYFR 243 Query: 200 LAKEWSRAITFLNQKKKNAKEW---NRNRAILLIARSLENADKGDMIASYHDAI------ 250 + + A+ L++ + + + + + + ++ G+ A + I Sbjct: 244 RKGDINEALHLLHRALQTSPSSGYLHYQKGLCYKQQMIQLKTSGNRQARRQENIQELAHQ 303 Query: 251 ------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 E+L L MA +C A+ + +AE ++ +N N+ H+ Sbjct: 304 AICEFQETLNLRPTFEMAYVCMAEMQAEIGQYEEAEGNFQEALNLN------NLVAHIE- 356 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 ++ + R + + +++ + + L++ A K + A++ + + Sbjct: 357 QDIHFRYGRFQQFHKKSEDKAITHYLKG---LKLEEKSFAWRKLLTALEKVAERRV 409 >gi|312218032|emb|CBX97978.1| similar to DnaJ (Hsp40) homolog [Leptosphaeria maculans] Length = 516 Score = 45.7 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 85/280 (30%), Gaps = 41/280 (14%) Query: 106 MHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLE-MMLQIPA---TREFAVYSL 160 + +S + + L++ + LA + + A + + + P T Sbjct: 18 LACALSAADIPADLPVSQLIKDAGVKLATGETHDALTYFDVAISRDPQNYMTYF--RRG- 74 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 +G AQ K L++ P + +W+ A K A+ Sbjct: 75 -AAYLSLGRTTQAQHDFDKVLELKPGFEGALVQRAKIKARKADWAAARKDYEAAGKTAEI 133 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + A + E ADKGD A A ++ + + A+ + + Sbjct: 134 AELDEAQGAAILAQEAADKGDWEACVSHAGTAIVVAGGAHDIRKLRARCRFEKGE----- 188 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV-IVSKIALEMG 339 ++E + L +IN +E + + +G Sbjct: 189 -VIEG-------------------------ISDLQHLLQINTGDIEPHLQSSAMAFYSLG 222 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++ ++ P ++ + L + E++ + K+ Sbjct: 223 ETEKGLKHIAQCLQSDPDSKVCMKLRRREKSLEKSLKKVR 262 >gi|157812778|gb|ABV81134.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Cydia pomonella] Length = 287 Score = 45.7 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVVDAEECYNTALRLCPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVAGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVVDAEECYNTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVAGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|71735966|ref|YP_273350.1| hypothetical protein PSPPH_1080 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556519|gb|AAZ35730.1| conserved hypothetical protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325777|gb|EFW81838.1| hypothetical protein PsgB076_05233 [Pseudomonas syringae pv. glycinea str. B076] gi|320327307|gb|EFW83321.1| hypothetical protein PsgRace4_26251 [Pseudomonas syringae pv. glycinea str. race 4] gi|330879640|gb|EGH13789.1| hypothetical protein Pgy4_14969 [Pseudomonas syringae pv. glycinea str. race 4] Length = 656 Score = 45.7 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 7/123 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL+ R GD + D ++ L ++ A + +A L Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--LAVGNLPLRE-QASLYAVMGQPNEALQRL 302 Query: 284 EKI 286 +K Sbjct: 303 QKA 305 >gi|28198965|ref|NP_779279.1| porphyrin biosynthesis protein [Xylella fastidiosa Temecula1] gi|182681677|ref|YP_001829837.1| HemY domain-containing protein [Xylella fastidiosa M23] gi|28057063|gb|AAO28928.1| porphyrin biosynthesis protein [Xylella fastidiosa Temecula1] gi|182631787|gb|ACB92563.1| HemY domain protein [Xylella fastidiosa M23] Length = 389 Score = 45.7 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 124/367 (33%), Gaps = 19/367 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56 + L +FF++ L I S + P DV I G Y T+ +L + Sbjct: 4 LRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVLLLW 63 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L ++ + + + Y +G+ L GL ++ LA ++ S+ Sbjct: 64 SLRSLLVLPI-------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEV 116 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L +++A ++ A+ + + T + S + + + Sbjct: 117 SAIALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLD 174 Query: 177 ATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A + + P ++Q + +S T Q+ + E+ R + + Sbjct: 175 ALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQ 234 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHPE 294 D + + ++LK N + A L +N + E LE+ W N Sbjct: 235 AKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN---- 290 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y L + + RA ++ +S L+ + ++AL QA A+ Sbjct: 291 LIRLYGFLPLKEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALRQQEYSQAETFLRRAIDK 350 Query: 355 APRKEIF 361 E + Sbjct: 351 ETNAETW 357 >gi|294084873|ref|YP_003551633.1| TPR repeat-containing protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664448|gb|ADE39549.1| TPR repeat protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 768 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 23/208 (11%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + + D A +A+ + PD + S A Q Sbjct: 201 GVILQKLVRLDEAEASY--KQAIALQPDYAEAHGNLAATLQECGRLSEAEASYKQAIALQ 258 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ A + D G + + ++ + L + I+ R+ Sbjct: 259 PDY----AKAHFNLASTLHDLGRLDEAEVSYMQVIALIPTFT-------DAHINLGITRQ 307 Query: 279 AEVILEKIWKVNPH-----PEIANIYTHLLSE-NTVGKLKRALRLE----EINKESVESL 328 + L+ H P+ A + +L S + +G+L A + + ++ Sbjct: 308 SLAKLDAAEANFKHAIVLQPDYAKAHFNLASTLHDLGRLDEAEASYEQAIALQPDYAKAH 367 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ E+G +D+A A A+ + P Sbjct: 368 FNLAGTRRELGRLDEAEASYNDAIALQP 395 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 84/250 (33%), Gaps = 24/250 (9%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + A + +LQ A ++L + +G +A + KALD++P Sbjct: 14 AAHNQGNLQKAERIYQAILQSQPKHPDANHNLGLIAIAMGKSETALQLFQKALDVNPKVE 73 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI-----------ARSLENA 237 + V + + A + + KK + + A+ L L++ Sbjct: 74 QFWLSYVDALIKNNQIKDAKRAIKKAKKIGFDSQKLEALSLSPKLPVAGKTPPQAQLDSL 133 Query: 238 DKGDMIASYHDA-IESLKLCDNSIMA----SICAAKSLISQNKKRKAEVILEKIWKVNP- 291 K Y DA ++L L + A L N+ +A ++ ++P Sbjct: 134 LKCYQAGQYGDAEKQALSLTKTFPRHQFGWKVLGA-ILGQTNRNAEALTAIQMTVTLSPK 192 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 H + I L+ + + + + E+ ++ E G + +A A Sbjct: 193 DAEAHCNLGVILQKLVRLDEAE--ASYKQAIALQPDYAEAHGNLAATLQECGRLSEAEAS 250 Query: 348 AMLAMKIAPR 357 A+ + P Sbjct: 251 YKQAIALQPD 260 >gi|262305001|gb|ACY45093.1| acetylglucosaminyl-transferase [Ischnura verticalis] Length = 276 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVSEAEECYNTALRLCPSHADSLNNL--ANIKREQGFVEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|262304975|gb|ACY45080.1| acetylglucosaminyl-transferase [Craterostigmus tasmanianus] Length = 288 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 +P A + ++ + H + L L I + A + + P A Sbjct: 34 GQVPDAEECYNTALRLCPSHADSLNNL--ANIKREQGFTEDATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPDAIASYRTALKLKPDFPDAYCNLAHCL 200 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVPDAEECYNTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFTEDATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I A A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPDAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|114569845|ref|YP_756525.1| peptidase M48, Ste24p [Maricaulis maris MCS10] gi|114340307|gb|ABI65587.1| peptidase M48, Ste24p [Maricaulis maris MCS10] Length = 453 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 5/161 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 H+ L R + S + L Q+ + A +++ T Sbjct: 280 HDARLERALEEIASLLAEEPENPYFHELHAQMLFESGRPGQAIAPNRRSVELEPTAPLLR 339 Query: 158 YSLYFESCRIGDL---NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 +L D A + ALDI PD + + + + A+ L Sbjct: 340 INLATSLIATDDPDHLEEASQNLRVALDIEPDNGFAWYQLSIVHERNGD--TALAQLAIA 397 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +++ NR RA +R+ + G IES+ L Sbjct: 398 EQSYAAGNRQRAHQFASRARTALEIGTPAWVRATEIESVSL 438 >gi|332141193|ref|YP_004426931.1| response regulator receiver protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327551215|gb|AEA97933.1| response regulator receiver protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 561 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 23/204 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + L + + A ++ +LQ P TR L + A +A ++P Sbjct: 214 RSLLRQDELEEAQLLVDDLLQRPDTRFLTYDLLAQYFIEKEQFDIAYEQMKEASRLAPRN 273 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---------EWNRNRAILLIARSLENAD 238 + + L + ++ + K AK N R+ + +A SL N + Sbjct: 274 IERNKRLWDLARLNHDKKGQLSAVQNMAKFAKNSIHDSPQLTLNVIRSTIDLATSLGNTE 333 Query: 239 KGDMIASYHDAIESLKLCDNSIM-----ASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + +E LK + A+ L ++ KR AE +++ Sbjct: 334 TERYLQKAESELEELKQQKGMQSQLGEQIDVVKARVLCLRDDKRSAEKLMK--------- 384 Query: 294 EIANIYTHLLSENTVGKLKRALRL 317 + + L E+++ K+K L Sbjct: 385 DRSASTEGLSMEDSLDKMKAFHEL 408 >gi|329847987|ref|ZP_08263015.1| bacterial type II and III secretion system family protein [Asticcacaulis biprosthecum C19] gi|328843050|gb|EGF92619.1| bacterial type II and III secretion system family protein [Asticcacaulis biprosthecum C19] Length = 545 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 31/213 (14%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSA 173 L++ + AL + A P + +L + + GD + Sbjct: 35 QPAGARLMQARDALMAGDTSTAMAGFGDAAARNPNDPNAQTLL--ALTYHAAAKGDPET- 91 Query: 174 QRYATKALDIS----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A D++ DA W + + A + + + R L Sbjct: 92 LDLAAAGYDLALRSDQDAFWAAALAGKAVYDRGRYEEAQGYFARAVMMRPDDTR----AL 147 Query: 230 IARSLENADKGDMIASYHDAIESLKL---CDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +A S+ GD + A +L A + + + RKA + Sbjct: 148 LALSMSAYMSGDPQLAALAAERVTQLPADAQTHAEAVRLSGLAYAATG--RKA-----EA 200 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 W+ Y L E R L Sbjct: 201 WQSY------ARYAELRPEAAAPMHVRISDLVR 227 Score = 38.4 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 64/204 (31%), Gaps = 12/204 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWN 222 +C I SA A + +A++ A + S A+ + +N + N Sbjct: 18 ACAITQPPSALGMAAHSQPAGARLMQARDALM-----AGDTSTAMAGFGDAAARNPNDPN 72 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + L + D + + +L+ ++ A+ A K++ + + +A+ Sbjct: 73 AQTLLALTYHAAAKGDPETLDLAAAGYDLALRSDQDAFWAAALAGKAVYDRGRYEEAQGY 132 Query: 283 LEKIWKVNP--HPEIAN----IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + + P + Y + +R +L + E++ + Sbjct: 133 FARAVMMRPDDTRALLALSMSAYMSGDPQLAALAAERVTQLPADAQTHAEAVRLSGLAYA 192 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEI 360 G +A ++ P Sbjct: 193 ATGRKAEAWQSYARYAELRPEAAA 216 >gi|254368871|ref|ZP_04984884.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|157121792|gb|EDO65962.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 385 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKFFKLIIAVALATLVGIWATKYHGYIMLVLADKNIKMNLVAFVFITFILLFILILCVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|88604422|ref|YP_504600.1| TPR repeat-containing protein [Methanospirillum hungatei JF-1] gi|88189884|gb|ABD42881.1| TPR repeat [Methanospirillum hungatei JF-1] Length = 565 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 23/266 (8%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA---TREFAVY 158 A+ + + S + Y + A E + P TR Sbjct: 205 AQAIDALQSALTLDPSNAGAYYEMGRAYEKLGNRTAARNYYETAIKLNPDNVWTRFVYGK 264 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L GD SA + +L S + Y ++ +A+ +N Sbjct: 265 NLAI----SGDYESAIKELKTSLKGSSCQASAWYELANAYYQTGQYDQALEAINSALTID 320 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 RA+ L R+ ++ + A+++ + AS+ + I+ + R Sbjct: 321 PYTKEYRALYLSIRAAQDPASWSLQNVTKRAVDAPEN------ASVWFYQGAIAYHDGRY 374 Query: 279 AEVI--LEKIWKVNP-HPEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIV 331 A+ + L ++P +PE Y +++ +G+ L + ++ + + Sbjct: 375 ADALTYLTSAVSLDPMNPE--AWYYRGVTQYELGRYQDALCSFDKTILLDPGNAWAYYYR 432 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 I + G + A A +++ P Sbjct: 433 GDILQKGGQCEYAIAYLNKGIQLDPT 458 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 4/124 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A + L+ L + + A Y + ++G+ +A+ Y A+ ++PD W Sbjct: 202 GNYAQAIDALQSALTLDPSNAGAYYEMGRAYEKLGNRTAARNYYETAIKLNPDNVWTRFV 261 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++ ++ AI L K + +A + G + +L Sbjct: 262 YGKNLAISGDYESAIKELKTSLK----GSSCQASAWYELANAYYQTGQYDQALEAINSAL 317 Query: 254 KLCD 257 + Sbjct: 318 TIDP 321 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 40/302 (13%), Positives = 94/302 (31%), Gaps = 23/302 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---PATRE 154 + A +H+ + L + + + + + + A+ + +L I T Sbjct: 67 GDNEGA--IHAITRAAEFSPGNSTILLAKAHLHITKGERDQANRAILKVLDILPGNKTAL 124 Query: 155 FAVYSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + SL + + Y L I P+ W + + A+ + Sbjct: 125 DLLSSL------RMNTTTPLNYILVEHDLLIEPNNTWSAFNKGRLLFEEGKHREALAWFI 178 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + +++ A + G+ + +L L ++ A ++ Sbjct: 179 KA----TTYDQKNAPAWYFTGTTYTELGNYAQAIDALQSALTLDPSNAGAYYEMGRAYEK 234 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESL 328 + A E K+NP + + + +S + +K + + + Sbjct: 235 LGNRTAARNYYETAIKLNPD-NVWTRFVYGKNLAISGDYESAIKELKTSLKGSSCQASAW 293 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNTDKILYWTQSALH 387 ++ + G DQA A+ I P + + L I A + + T+ A+ Sbjct: 294 YELANAYYQTGQYDQALEAINSALTIDPYTKEYRALYLSIRAAQDPASWSLQNVTKRAVD 353 Query: 388 AM 389 A Sbjct: 354 AP 355 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 14/199 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD A T+A + SP + A ++ E +A + K + N+ Sbjct: 64 KEQGDNEGAIHAITRAAEFSPGNSTILLAKAHLHITKGERDQANRAI-LKVLDILPGNKT 122 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LL + + + I HD + + N+ ++ + L + K R+A Sbjct: 123 ALDLLSSLRMNTTTPLNYILVEHDLL----IEPNNTWSAFNKGRLLFEEGKHREALAWFI 178 Query: 285 KI--WKVNPHPE---IANIYTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEM 338 K + P YT L + + L+ AL L + + + + + ++ Sbjct: 179 KATTYDQKNAPAWYFTGTTYTELGNYAQAIDALQSALTL---DPSNAGAYYEMGRAYEKL 235 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G+ A A+K+ P Sbjct: 236 GNRTAARNYYETAIKLNPD 254 >gi|89256047|ref|YP_513409.1| hypothetical protein FTL_0656 [Francisella tularensis subsp. holarctica LVS] gi|115314525|ref|YP_763248.1| hypothetical protein FTH_0659 [Francisella tularensis subsp. holarctica OSU18] gi|156502059|ref|YP_001428124.1| hypothetical protein FTA_0692 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010195|ref|ZP_02275126.1| hypothetical membrane protein [Francisella tularensis subsp. holarctica FSC200] gi|254367387|ref|ZP_04983413.1| hypothetical protein FTHG_00615 [Francisella tularensis subsp. holarctica 257] gi|290954239|ref|ZP_06558860.1| hypothetical protein FtulhU_08364 [Francisella tularensis subsp. holarctica URFT1] gi|295312359|ref|ZP_06803144.1| hypothetical protein FtulhU_08351 [Francisella tularensis subsp. holarctica URFT1] gi|89143878|emb|CAJ79096.1| hypothetical membrane protein [Francisella tularensis subsp. holarctica LVS] gi|115129424|gb|ABI82611.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|134253203|gb|EBA52297.1| hypothetical protein FTHG_00615 [Francisella tularensis subsp. holarctica 257] gi|156252662|gb|ABU61168.1| hypothetical protein FTA_0692 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 385 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKFFKLIIAVALATLVGIWATKYHGYIMLVLADKNIKMNLVAFVFITFILLFILILCVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|299149456|ref|ZP_07042513.1| TPR-repeat-containing protein [Bacteroides sp. 3_1_23] gi|298512643|gb|EFI36535.1| TPR-repeat-containing protein [Bacteroides sp. 3_1_23] Length = 272 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 9/170 (5%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 +A L Q K + N A+L L G+ + +L ++ + Sbjct: 39 KAEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLD 97 Query: 266 AAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEI 320 A + K +A +L++ K N + Y + L + ++ RL E+ Sbjct: 98 RAAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARMD-YNRLLEL 155 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 + +S + ++ + + G +A + P +++ A +E+ Sbjct: 156 DPQSYSGRLGLATLEQKEGKFREALEILNKMITATPDDATLYIARADVER 205 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 6/166 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L I + + + A+ +++ + +E + Y R D +A+ + Sbjct: 94 ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARMDYNRL 152 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ P + + ++ A+ LN+ + A L IAR+ + Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMITATPD----DATLYIARADVEREMK 208 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L S A + ++Q KK A+ EK Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLTQKKKGLAKADFEKA 254 >gi|163781658|ref|ZP_02176658.1| hypothetical protein HG1285_02208 [Hydrogenivirga sp. 128-5-R1-1] gi|159882878|gb|EDP76382.1| hypothetical protein HG1285_02208 [Hydrogenivirga sp. 128-5-R1-1] Length = 159 Score = 45.3 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 11/153 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATR----EFAVYSLYFESCRIGDLNSAQRYATKAL 181 E + A E + +++ T D + A Y KA+ Sbjct: 14 EAYTHHMLGDIDKAIELYKQSIEVQPTAKAYTFLGWAYSMK-----KDYDKAIEYCKKAI 68 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +I PD + + + AI +L Q R+ + +AR G Sbjct: 69 EIDPDFGNPYNDIGAYLIEQGRFEEAIPWLKQAIVAKNYEPRHFPRINLAR--IYTAMGK 126 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + + E+LK+ A + + L N Sbjct: 127 LYDALREVEEALKIDPEYKPAHVLRHQILGMLN 159 >gi|194333673|ref|YP_002015533.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311491|gb|ACF45886.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii DSM 271] Length = 199 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 72/188 (38%), Gaps = 17/188 (9%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A+++S + Y+ + +S AI L+ +RN L +RS+ + Sbjct: 9 EAAVNVSHPLSEDRYELALAYIDRERYSEAIAQLDAIL----VMSRNHVNALYSRSIAHM 64 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--- 294 G + +D + + L + A ++ K+ A L+K ++ P+ Sbjct: 65 SSGHYRQAGNDLLRVVTLDRAFLPAYKSLGYIQLTLGKEEAAVKTLQKAIAID--PDYVD 122 Query: 295 ----IANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +++ + L ++ + + +AL L + E E ++ L G + A+ Sbjct: 123 AYCVLSDAFMDLGRNDEALEMINKALEL---DPEGEEPHCKMAMYCLARGDFKRLRAEQE 179 Query: 350 LAMKIAPR 357 + ++ P Sbjct: 180 ILQRLNPD 187 >gi|163857328|ref|YP_001631626.1| hypothetical protein Bpet3016 [Bordetella petrii DSM 12804] gi|163261056|emb|CAP43358.1| hypothetical protein predicted by Glimmer/Critica [Bordetella petrii] Length = 1133 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 4/193 (2%) Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL 124 L+ P +K L L + AR + ++ +++ Sbjct: 6 LLTLPQAQARTRRFPLDLHAWKELGRNL--CNVGELDQAR--AAVEKALELAPDDPQIWI 61 Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L QI Q A E + + A + L R+ D + A ++ +AL+ S Sbjct: 62 LLGQIETRADQDRKARGHFEHAISLQEKLPGAHHGLAAVLLRLNDCDGALKHIERALEYS 121 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + A L + + + L + A Sbjct: 122 PGQSAIKAQKSIILSRNYRYEEAGALLKELLEEDPKNAFAHWTNLGNIQRDLGKLEHAEA 181 Query: 245 SYHDAIESLKLCD 257 SY A+E Sbjct: 182 SYRQAVELQPASP 194 >gi|329847188|ref|ZP_08262216.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] gi|328842251|gb|EGF91820.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] Length = 527 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 49/147 (33%), Gaps = 5/147 (3%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E + G + A+ KAL P + + +K+ A+ L + + Sbjct: 52 EWLQAGQTDQARIEVEKALKTDPRSSVAYSVRAMIRMNSKDLDGALADLTTAQGLSP--- 108 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 N A ++ + D+ + A ++ L + MA L +AE Sbjct: 109 -NDAQNYFLAAVIYMQREDLPRALTAANKAADLAPDDAMAQGMRIVLLGVTGDTAQAEDK 167 Query: 283 LEKIWKVNPH-PEIANIYTHLLSENTV 308 + P+ PE A + + +E Sbjct: 168 AVAWFTAQPNSPEAAQVLAGIYAETNR 194 >gi|323447882|gb|EGB03789.1| putative O-linked GlcNAc transferase [Aureococcus anophagefferens] Length = 971 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 52/176 (29%), Gaps = 10/176 (5%) Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPD 186 + A + + + P + L D A R A+ + P+ Sbjct: 246 AMQEQGNLIEAKQCYQTAIRLRPD--FAIAHGNLGSCLLTSHDAEGAVRALRHAIQLEPN 303 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + AI + + + L A D+G + + Sbjct: 304 FPDAYNNLGNALRSLAHMREAIACYRTALRLKPDHPHAYSNLGTAM----RDRGLIREAI 359 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 H + + +L + A L Q + +A + ++ P+ A YT+L Sbjct: 360 HCNVTAARLMPHFAPAHANLGSLLREQGQLDQALAHYHQAIALD--PDFAEAYTNL 413 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 88/264 (33%), Gaps = 13/264 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + P + + + + L + L Q + A E +M L I A Sbjct: 115 GDYPGTLRFYLKAIKYKPRFGDAYNNLATAHMHL--GQVSDAIETYQMGLVIDPGLVDAH 172 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L G L +A+R +A+ ++P + + + S AI + + + Sbjct: 173 CNLGNLLKAQGKLEAARRCYLEAIRLNPAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRL 232 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A + ++G++I + +++L + +A L++ + Sbjct: 233 CPPF----ADVYSNLGSAMQEQGNLIEAKQCYQTAIRLRPDFAIAHGNLGSCLLTSHDAE 288 Query: 278 KAEVILEKIWKVNPH-PE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A L ++ P+ P+ + N L + + + + + Sbjct: 289 GAVRALRHAIQLEPNFPDAYNNLGNALRSLAH--MREAIACYRTALRLKPDHPHAYSNLG 346 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + G I +A + A ++ P Sbjct: 347 TAMRDRGLIREAIHCNVTAARLMP 370 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 12/225 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A + + + P E +L +GD R+ KA+ P + Sbjct: 85 QQARDYHDAIRIEPQMAEA-YSNLANALKELGDYPGTLRFYLKAIKYKPRFGDAYNNLAT 143 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++ + S AI + A + L+ +G + A+ +E+++L Sbjct: 144 AHMHLGQVSDAIETYQMGLV--IDPGLVDAHCNLGNLLK--AQGKLEAARRCYLEAIRLN 199 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKL 311 +A A + + A + ++ P P A++Y++L N + Sbjct: 200 PAFAIAWSNLAGLFKDEGQLSTAIAYYREAIRLCP-P-FADVYSNLGSAMQEQGNLIEAK 257 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + + L + A A+++ P Sbjct: 258 QCYQTAIRLRPDFAIAHGNLGSCLLTSHDAEGAVRALRHAIQLEP 302 >gi|194333366|ref|YP_002015226.1| TPR repeat-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311184|gb|ACF45579.1| Tetratricopeptide TPR_2 repeat protein [Prosthecochloris aestuarii DSM 271] Length = 582 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 2/114 (1%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + + +L I A+ +L Y + GDL+ A YA KA+ PD P + Sbjct: 466 DMDKSRQAYIAVLDIDPENPLALNNLAYMMAESGGDLDKALEYALKAVAEEPDNPVFLDT 525 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDMIASY 246 + Y E+ A +L + + + L + ++L + +K + Sbjct: 526 LGWVYAQRGEYDNAKGYLEKAVQQKPDEPEIYQHLSEVYKALGDEEKAEAYRQK 579 Score = 37.2 bits (85), Expect = 5.9, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 79/238 (33%), Gaps = 14/238 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 I ++ Y +A + + + ++ + +YSL G+ A + + L P Sbjct: 140 AAIYHEQKSYELAAREFQTLSELDPSNITVLYSLAQSYLSAGEGGKALKVYLRILRFDPS 199 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 ++ + ++ AI L + + + R L E + D Sbjct: 200 DERTLSRILWLELKLHQYREAIATLRSLIRQVPDNQKLRLTL-----GELYLQIDEPQKA 254 Query: 247 HDAIESL-KLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-----KVNPHPEIANIY- 299 + E+L + + A + Q + + L + + +N E+A ++ Sbjct: 255 IEIFEALARDHPAFLPAWVDLLGVRAEQGDPLRFQECLNRYYSLDHVTLNQKIELARLFM 314 Query: 300 --THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + L T L R+ +++ L++ + + +A +++ Sbjct: 315 IRSELDGIYTAPALVMLERIASEEPDNLNVLLMRAMLYSRQERYQEAREGLTRVLELD 372 >gi|163745675|ref|ZP_02153035.1| TPR domain protein [Oceanibulbus indolifex HEL-45] gi|161382493|gb|EDQ06902.1| TPR domain protein [Oceanibulbus indolifex HEL-45] Length = 569 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 1/171 (0%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL + ++++A + + + A R G A + Sbjct: 292 ALLLTASLLENLGEHDLAIAEYKSLPPNSPAYHAAELGRAEALRRSGKTAQAIEVLEQLA 351 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 V + +++ AI +Q E R R +L AR++ GD Sbjct: 352 RSHGSLAVVHSTLGDMLRAEEDYEAAIASYDQALDLTAETARARWVLFYARAIAKERSGD 411 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVILEKIWKVNP 291 S D +LKL SL+ Q + +A ++E+ +P Sbjct: 412 WEGSEADFRAALKLNPEQPQVLNYLGYSLVEQQRSLDEALDMIERAVAASP 462 >gi|78222387|ref|YP_384134.1| radical SAM family protein [Geobacter metallireducens GS-15] gi|78193642|gb|ABB31409.1| Radical SAM [Geobacter metallireducens GS-15] Length = 563 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 13/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPA------TREFAVYSLYFESCRIGDLNSAQR 175 L + + A+ A +++ ++ GD+ A + Sbjct: 443 TNLGQGEWLEAKGDIGKAEALYREIVERQPENPWGWLALGGLHG------SRGDVTRAGK 496 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKEWNRNRAILL 229 +A+ + P A+ + + A K ++ R R ++ Sbjct: 497 AFERAISLVPAHVPAYLALGDLRLEEGDQRGAKQLYETAKRLNPRDTDVGERLRMVVA 554 >gi|107022599|ref|YP_620926.1| hypothetical protein Bcen_1046 [Burkholderia cenocepacia AU 1054] gi|116689548|ref|YP_835171.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424] gi|105892788|gb|ABF75953.1| Tetratricopeptide TPR_2 [Burkholderia cenocepacia AU 1054] gi|116647637|gb|ABK08278.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia HI2424] Length = 275 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 47/163 (28%), Gaps = 14/163 (8%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL A QY+ +L P L + GD A + + Sbjct: 90 PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLEQ 148 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++P + + + + A L + E + +L L Sbjct: 149 ATALAPTDAATLSDLAYSKMREGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLAT 204 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 G + ++ KL A ++ I ++ + A + Sbjct: 205 GHAKDARRL-MDQQKLSP--------AVRNQIRDDETKVAAAM 238 >gi|330965039|gb|EGH65299.1| hypothetical protein PSYAC_10376 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 507 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 17/208 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD +A A A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNETAVSEARDAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL R GD + D ++ L ++ A + + ++A L Sbjct: 246 NDATLLAQRGQLRQRLGDRDGARKDFAQA--LAVGNLPLRE-QASLYAAMGQPKEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSENTVGKL---KRALRLEEINK----ESVESLVIVSK 333 +K P E+ Y + + G L KR R + ++ S + S Sbjct: 303 QKARDAGELQPGDEVQIAYFLSQAGDDRGALAEFKRVDRSSGLKPREVQDAAYSAMRSSD 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 A + + P +++F Sbjct: 363 DAQAIAYFKRVLDYQQTGDLQMPDQQVF 390 >gi|298242645|ref|ZP_06966452.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297555699|gb|EFH89563.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 484 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 79/267 (29%), Gaps = 37/267 (13%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A A Y A E E + A Y+L +GD A +A+D+ P+ Sbjct: 45 AAANEDYETAAECFERAVAADPEDARARYNLALAQQYLGDTELAIAGYRRAIDLDPNLID 104 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y + ++ Q + + + L D + Y DA Sbjct: 105 SYINLGNLYGEIGMYEESLETFQQGLELDPQSDELY--------LSVGDTYRLQNLYRDA 156 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 I++ + + AA +L + Sbjct: 157 IQAYRQALMLNPDNTLAADNLRD---------------------------VRERVNDQYR 189 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLLAQIE 368 ++ R + + ++ I L+M D+A + A + + P+ + +LA + Sbjct: 190 RMMEQERRIDEDPADPTRYAELASIQLDMHRYDEALSLANQMIALDPQGRAGYDMLAAVY 249 Query: 369 QANSHNTDKILYWTQSALHAMPDP-LW 394 + + + A DP W Sbjct: 250 EQMGDAEQAAEIYQRIANQYPEDPDAW 276 >gi|221106374|ref|XP_002163424.1| PREDICTED: similar to polaris, partial [Hydra magnipapillata] Length = 867 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 49/165 (29%), Gaps = 19/165 (11%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEV-------QIALAERQYNIAHEKLEMMLQIPATREFA 156 +KM + FH LV QI ++ A E + +L I T Sbjct: 567 KKMSKFDEALECFHKLNLVLPNNAEVICQIGQIYENDKNTAEALEWYQQLLNIVPTDCEV 626 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLN 212 + + GD + A +Y +A P W+ + + +AIT+ Sbjct: 627 LRKVAMLYEEDGDKSQAFQYMYEAFRYYPSCIKTLVWLGGYYIDAQFIE----KAITYFE 682 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + R +L G+ + E K Sbjct: 683 RAVQVQPLEVRWHLMLATCYRK----AGNYTQAMETYKEIHKKFP 723 >gi|195126359|ref|XP_002007638.1| GI13051 [Drosophila mojavensis] gi|193919247|gb|EDW18114.1| GI13051 [Drosophila mojavensis] Length = 1205 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 166 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERA 223 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 224 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 282 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 283 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 337 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 338 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 397 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + A I K + + A+I Sbjct: 398 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 452 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 71/240 (29%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 312 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 371 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D + Sbjct: 372 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 431 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A+ LE Sbjct: 432 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKLAKDTLESA--------------- 476 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A E + + ES ++++ M D A +K P Sbjct: 477 ---------LKHASSEMEKDVKYYESIQVTMKYNLARLNEAMSCFDVADKLYKEILKEHP 527 >gi|121997016|ref|YP_001001803.1| hypothetical protein Hhal_0207 [Halorhodospira halophila SL1] gi|121588421|gb|ABM61001.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila SL1] Length = 796 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 79/262 (30%), Gaps = 41/262 (15%) Query: 123 YLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 LL+ + A + +L P R ++ G + +A+ + Sbjct: 149 QLLDAAALTDSGALHGAEAVVRGLLAESPDDPGLRLQL--GDLLQAQ--GRIYAAEHHYA 204 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + L +PD E + + + + + A +A + + Sbjct: 205 RLLADTPDQTLAAERL--RRLPHRGPAEPADTPEPIAPQEAPAAPQTARDHLATAEQALQ 262 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 GD+ ++ +L+L A A+ LI++N +AE L+++ Sbjct: 263 GGDIASAEQAVRRALELEPELTRADYLLAEVLIARNALAEAEEQLQQV------------ 310 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ E+ + ++++A G D+A P Sbjct: 311 -------------------ATRFPDATEARLNLARLASWQGDYDRALDHYDALAAEHPTD 351 Query: 359 EIFLLLAQIEQANSHNTDKILY 380 F L A + D+ Sbjct: 352 PTFPLEAARLAGWAGEPDQARE 373 >gi|262200020|ref|YP_003271229.1| hypothetical protein Hoch_6872 [Haliangium ochraceum DSM 14365] gi|262083367|gb|ACY19336.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 1459 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 90/286 (31%), Gaps = 21/286 (7%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCR 166 + + + L +Q +R A E +L P A ++ R Sbjct: 1150 KSAAEAAPERSDIGLRLAIQYEKLDRDEEAA-AAYEQLLSTSSPTVDTLARAGRFYA--R 1206 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G + A + L I A + + E + A + ++ A Sbjct: 1207 QGQTDKAGEIGERILAIKDTAAAGHYLLGEGQFAQGEHAAARDSFRRAADIEQDPQYLEA 1266 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 A +E D+ ++ E+ + I + A+ LI++ ++A LE + Sbjct: 1267 TARAAERMELYDE-----AFEAYSEASRRAPEYIAPRLGRARLLIARRDFQRATEELEDL 1321 Query: 287 WKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K+ P+ Y E + I+ E+ + K +E G Sbjct: 1322 RKIAPNEASVFHYLGESLQAQEKHKEAISYFRTALGIDGRRAETHYRLGKSYIERGDERD 1381 Query: 344 AHAKAMLAMKIAPRKE--------IFLLLAQIEQANSHNTDKILYW 381 A ++ A +IA + L +++A S + + W Sbjct: 1382 AASEFTTATQIARNSATPPSWLVDAYYELGYVQRALSRRGEAVRAW 1427 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 95/299 (31%), Gaps = 25/299 (8%) Query: 72 LFHMLHKRNYDKGYKALYTGLMS----IAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLE 126 L + + + L + + A + +Y ++ L L Sbjct: 1005 LERVFAAKEQIDDRRGLSRAYVMQGQILGADESQREAAIAAYEEALTLAGDDALESALAL 1064 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A L + + A+ A +L R A+ + KAL++ P Sbjct: 1065 ADLYTLLGRMEKARAVLAPVERRAASDAAASVALGIRYMRANAWTDAETWLRKALELEPG 1124 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + Q + + A L + A E R+ L +A E D+ + A+ Sbjct: 1125 DVDAQFQLGQVLASLERYDEAFEMLKSAAEAAPE--RSDIGLRLAIQYEKLDRDEEAAA- 1181 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-------- 298 + L ++ A + Q + KA I E+I + + A Sbjct: 1182 -AYEQLLSTSSPTVDTLARAGRFYARQGQTDKAGEIGERILAIK---DTAAAGHYLLGEG 1237 Query: 299 -YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +RA +E+ + + +E ++ A M D+A A + AP Sbjct: 1238 QFAQGEHAAARDSFRRAADIEQ-DPQYLE---ATARAAERMELYDEAFEAYSEASRRAP 1292 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 81/275 (29%), Gaps = 39/275 (14%) Query: 89 YTGLMSIAAHNIPLARK-MHSYVSQQHTFHNEYL--VYLLEVQIAL--AERQYNIAHEKL 143 G + A + + + + L ++ + Q + + A +L Sbjct: 729 AQGAYAAIIDQGRDAERWRQAGLDYTRRIDDSSLGGAHVDKAQALKSIDQGRPAAAISRL 788 Query: 144 EMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVL 200 + +L + R D A ++ K+L++SP P + + + Sbjct: 789 QQVLSRTPNDPDAVLYQGWAHAAAR--DNTQAAQFFEKSLELSPKRPLPALYGLGRAQLA 846 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + A Q + R + + + + AD G +E Sbjct: 847 QGDRDSARATFAQILE-----QRESHLGALVGAAQAADVGGSDKREAKLLE--------- 892 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 + ++ R+ L + W + Y L S +R + Sbjct: 893 ----IVNRPDAAEGDPRE----LSRAWSL-------AAYISLDSGRIDEAGRRFEQAINA 937 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +V +LV +++AL + A + + Sbjct: 938 HPANVNALVGRARVALAQERYEDATEQLTRVIGTD 972 >gi|108762237|ref|YP_633061.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|14517942|gb|AAK64445.1|AF377339_6 serine/threonine kinase associate protein KapB [Myxococcus xanthus] gi|108466117|gb|ABF91302.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 271 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 18/249 (7%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + E G L+ A + KA+D+ P + + + Y K + A++ K Sbjct: 17 RGI--ELADRGWLDEAIKEFKKAIDLDPSSAHAHDNLATVYAEKKLFREALSEYLTALKL 74 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E L S + + + E+++L A + + Q + Sbjct: 75 EPESATAHYNLACFLSTHAGEM-----AVEEYKEAIELDPEYPDAHLNLGLTYADQGRVE 129 Query: 278 KAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A L+ + P E+A + + + + + + ++ E+ + + Sbjct: 130 EAMRELQTAIELDSQDAFPRHELAALMMD--EGDYRSAITQLKEVVRLEPDNFEAQLDLG 187 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPD 391 + G +A A + P + L+ + D + Y Q +L A Sbjct: 188 ICFAQKGFYAEAERAYERARALNPEDLLLNYNLSALFALWGRPKDAVQY-LQKSLTADRP 246 Query: 392 PL--WISDD 398 + W+S D Sbjct: 247 KVMGWLSTD 255 >gi|241759375|ref|ZP_04757480.1| N-acetylglucosaminyl transferase [Neisseria flavescens SK114] gi|261381361|ref|ZP_05985934.1| tetratricopeptide repeat protein [Neisseria subflava NJ9703] gi|241320320|gb|EER56639.1| N-acetylglucosaminyl transferase [Neisseria flavescens SK114] gi|284795678|gb|EFC51025.1| tetratricopeptide repeat protein [Neisseria subflava NJ9703] Length = 389 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 18/185 (9%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155 AR++ + QQ ++ L ++ + + A +L P T R Sbjct: 57 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVNEKRAR 113 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ L G ++ A++ L + A + ++ Y ++W +AI Sbjct: 114 VLFELAQNYQSAGLVDRAEQIF---LGLQEGDMAREARQHLLSIYQQDRDWEKAIEMAQL 170 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSL 270 + + + A + K + A+ + A+E+ K C A+I Sbjct: 171 LSHDEQTYQFEIAQFYCEIAQAALFKSNFDAARYNIGKALEANKKC---TRANIILGDIE 227 Query: 271 ISQNK 275 Q Sbjct: 228 YRQGN 232 >gi|163796470|ref|ZP_02190430.1| TPR repeat [alpha proteobacterium BAL199] gi|159178320|gb|EDP62864.1| TPR repeat [alpha proteobacterium BAL199] Length = 595 Score = 45.3 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 78/257 (30%), Gaps = 6/257 (2%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFES 164 M H + L +L +I +++ A E + R A + ++ Sbjct: 300 MIFARLALHLQPDFDLAAMLIAEILDDRKRFEEALVLYEAVRPDSPYRLLARLRAVSTLE 359 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 D ++AQ A D P+ P + + W AI + Sbjct: 360 GLQRDDDAAQELIALAAD-RPELPDALIRLGDLERGRENWDAAIAAYGGALARMRPLEPR 418 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVIL 283 +L R + + D + +L+L + S + + + +A+ ++ Sbjct: 419 HWSVLYTRGIALERAKRWEDAEPDFLRALELRPDQPYVLNYLGYSWVDRGEHLDRAKAMI 478 Query: 284 EKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 EK ++ P + + + G + R + + +G Sbjct: 479 EKAVELRPQDGYIVDSLGWALYRLGDHAGAVGHLERAVALRPTDPTINDHLGDAYWRVGR 538 Query: 341 IDQAHAKAMLAMKIAPR 357 ++A + A+ P Sbjct: 539 RNEARFQWQRALTFEPT 555 >gi|325110772|ref|YP_004271840.1| hypothetical protein Plabr_4245 [Planctomyces brasiliensis DSM 5305] gi|324971040|gb|ADY61818.1| hypothetical protein Plabr_4245 [Planctomyces brasiliensis DSM 5305] Length = 728 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 54/138 (39%), Gaps = 6/138 (4%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + + ++L L + + L + K R++ + + P Sbjct: 478 QARQAFYNEQFDQALSTTDQALALAPQDAAINEFRSLCLFALGKYRESSANIHAVLAAGP 537 Query: 292 HPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + + ++Y++ + +L++ + N ++ ++ +++ L MG D A + Sbjct: 538 GWDWTTLISLYSN--PDTYTEQLRKLEADVKANPDAADTRFLLAYHYLTMGHEDAAVEQW 595 Query: 349 MLAMKIAP-RKEIFLLLA 365 +K+ P K LLA Sbjct: 596 QDVVKLQPDDKLSAQLLA 613 >gi|237809864|ref|YP_002894304.1| HemY domain-containing protein [Tolumonas auensis DSM 9187] gi|237502125|gb|ACQ94718.1| HemY domain protein [Tolumonas auensis DSM 9187] Length = 389 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 51/389 (13%), Positives = 113/389 (29%), Gaps = 15/389 (3%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+RLI +++ + ++ + V I + S I + F F +L Sbjct: 1 MIRLIVLLVILAAALLVGPQLADHQGYVMIAVADYTIEMSVITAAIIAFVFYFLLLLTEG 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + S + R Y K + G+ ++A A + + Q Sbjct: 61 LLSRLFSVRRGIRGWWQNRRYLKAQRQTQKGMTALAEGEYQRAEHLMLRSAGQSDL---P 117 Query: 121 LVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L+ L A + ++ + P + + G+ ++ Sbjct: 118 LLNYLSAAEAAHAQGAYQKRDEYLLKAGELDPQAQLAIQLTQVRLLQDQGEWQQSRELLE 177 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFL----NQKKKNAKEWNRNRAILLIARSL 234 + P P + + + Y + W + L Q+ + ++ + A Sbjct: 178 QLRQRWPQHPQILQRLRSIYQAQQAWQEELELLPLLRKQQLLSDDDFAAAQQQCYQAWFS 237 Query: 235 ENADKGDMIASYHDAIES---LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + + + ++ +A I +LI Q + A L + + Sbjct: 238 KILQEQNEDVLLAFWQQQPRVVRHTPQLKLALI---DTLIQQQHYQAAFEQLAPLLRKQA 294 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + L + L+ LR + + +S L + I A + Sbjct: 295 DEALWQRCAELKLSDYSQLLQLLLRQLKQHPQSPALLSALGHIYYHQEQYVPAQGYLERS 354 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + + P LA I + Y Sbjct: 355 VALQPTTRDQRALASIMEHQRLFEKAAEY 383 >gi|254250923|ref|ZP_04944241.1| hypothetical protein BDAG_00088 [Burkholderia dolosa AUO158] gi|124893532|gb|EAY67412.1| hypothetical protein BDAG_00088 [Burkholderia dolosa AUO158] Length = 839 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 82/273 (30%), Gaps = 21/273 (7%) Query: 99 NIPLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + Q + L +L Q + A L++ A Sbjct: 167 DAAAASYGKAIAFQPTYADAHSNLGNVLRAQ-----DRLADAIVHYRRALELNTELRAAH 221 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L GD + A +A + PD A+ +++ A + + Sbjct: 222 RGLAAALRATGDFDGALAHAR--AGLEPDDAPAHYALGLSLRGIQDFDGAARLFERACEI 279 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A L R +G+ S +++L A + + ++ Sbjct: 280 DPGYAPAWARLGELR----CQQGEYEESVRLCRHAIELDPELADAYNFLGLAYHNLDRMA 335 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIV 331 AE+ +NP H +A L ++ + + ++A L + ++ + + Sbjct: 336 AAELSHRHAIDLNPDDADAHHNLAAALFRLDKLDDAMDEYRKAQEL---GVDPMKIRLTL 392 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 I A A A+ P + L+ Sbjct: 393 GDILWAKRDFAGAIAAFRDAVDHDPHRAYARLM 425 >gi|145502321|ref|XP_001437139.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404287|emb|CAK69742.1| unnamed protein product [Paramecium tetraurelia] Length = 816 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 16/119 (13%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAH-EKLEMMLQIPATREFA---------VYS 159 ++ F E L LL + + Q + +E + R V+ Sbjct: 699 SAKYKDFTKEELKMLLRQKKLEIKEQVESGEFKAIEHLQDNKDMRFLLTGFKKDFMEVFG 758 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-----YVLAKEWSRAITFLNQ 213 F++ GD +A+ +AL + P+ TEAV+ Y +W + Sbjct: 759 KAFQAYLDGDWKTARAMFQEALKLKPNDG-PTEAVLHSMEETNYQKPSDWKGYRELTEK 816 >gi|295699207|ref|YP_003607100.1| cellulose synthase operon C domain protein [Burkholderia sp. CCGE1002] gi|295438420|gb|ADG17589.1| cellulose synthase operon C domain protein [Burkholderia sp. CCGE1002] Length = 1550 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 86/274 (31%), Gaps = 35/274 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G M + + A + + ++ + + + L+ A + + A + + Sbjct: 407 GEMLLQTGDPAGAEQAYRMALRRQADNPDAIRGLVGALAAQ--GRADEALQFANQLNAEQ 464 Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + + + GDL +A+ AL PD PW+ + + YV Sbjct: 465 QAKVGGIDRLRGEAQAAQARAAEARGDLGTARSLFEDALLNKPDDPWLRLDLARIYVRQG 524 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + ++ + L A +L +A+ D D A Sbjct: 525 AVANARSMMDGLLATHPDMTD----ALYASALLSAETQDWSTGLAQL-------DRIAPA 573 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 ++ A L+ V+ ++A + T + E + Sbjct: 574 ------------QRTDAMTTLQHRLWVHQQADLAT--RMAKNGQTQQAIATLRAAEPVAG 619 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + E + +++ + G +A + AM AP Sbjct: 620 NNPELIGVIASAYQQAGDPTRALSLVRAAMSAAP 653 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 57/197 (28%), Gaps = 15/197 (7%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GDL SA L PD P + A+ + Y A + A+T + + Sbjct: 713 RGDLASAYEVIAPWLAAMPDNPDLQAALGRMYASAGDDRNALTSFRVALQRRPD----DL 768 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LL A A + A ++L L N + +Q A L++ Sbjct: 769 SLLQAAISAAAGSKQFSYAETLANQALALAPNDPGVLATVGRMYRAQGNLSLASTYLQRS 828 Query: 287 WKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P +AN + A L N E ++ + Sbjct: 829 LVAANTPLVANAPRNAGSNVPRGWEAAMSQIGATPLPGTNP--FEGKTAIATSS----DA 882 Query: 342 DQAHAKAMLAMKIAPRK 358 D A A+ + P Sbjct: 883 DNAARPALPFLNTQPSS 899 >gi|195352269|ref|XP_002042635.1| GM15004 [Drosophila sechellia] gi|194124519|gb|EDW46562.1| GM15004 [Drosophila sechellia] Length = 931 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 17/240 (7%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDE--- 683 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + E++++ + + + Q + A K P I Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPT-SIPLWILSA 740 Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358 E G L +A LE + + V+ + L G + A A++ P Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNA 800 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|323306025|gb|EGA59759.1| Cdc27p [Saccharomyces cerevisiae FostersB] Length = 746 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 543 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPXHYNAYY 600 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 601 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 650 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 651 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 710 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 711 VGRKKDAIKELTVAMNLDP 729 >gi|262304971|gb|ACY45078.1| acetylglucosaminyl-transferase [Carcinoscorpius rotundicauda] Length = 290 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALHLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G ++ A+ AL + P + A + + Sbjct: 26 LANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E+ A + +G + + E++++ A +L + A Sbjct: 86 EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N + ++ E ++ ++ Sbjct: 142 LQCYTRAIQINPGFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 66/215 (30%), Gaps = 22/215 (10%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q + A E L + T ++ +L G + A R KAL++ P+ Sbjct: 27 ANALKEKGQVSEAEECYNTALHLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + + A + GD+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301 ++++ A A +A K+ P P+ +A+ Sbjct: 143 QCYTRAIQINPGFADAHSNLASIHKDSGNIPEAIASYRTALKLKPEFPDAYCNLAH-CLQ 201 Query: 302 LLSE--NTVGKLKRA----------LRLEEINKES 324 ++ + + ++K+ RL ++ Sbjct: 202 IVCDWTDYEARMKKLVSIVADQLEKNRLPSVHPHH 236 >gi|258541500|ref|YP_003186933.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-01] gi|256632578|dbj|BAH98553.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-01] gi|256635635|dbj|BAI01604.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-03] gi|256638690|dbj|BAI04652.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-07] gi|256641744|dbj|BAI07699.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-22] gi|256644799|dbj|BAI10747.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-26] gi|256647854|dbj|BAI13795.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-32] gi|256650907|dbj|BAI16841.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653898|dbj|BAI19825.1| tetratricopeptide repeat family protein [Acetobacter pasteurianus IFO 3283-12] Length = 620 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 96/298 (32%), Gaps = 11/298 (3%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 AR M + E + L E+QI A E L + Q A L Sbjct: 321 EAARLMLGFALAMDPTLAEARLMLAEIQIDEDHG--AAARETLLRVPQSDPMSPVARLRL 378 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 A + PD + A+ V K+W AI + A Sbjct: 379 AVLDSTPDQATEAVSLLRPLVAQLPDQILLQRALGNALVQQKDWKGAIAAYTKAIDLASA 438 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKA 279 LL R++ + GD + DA +L + M S++ ++ +A Sbjct: 439 QKDVDWTLLFLRAMVYHEMGDWPHARDDARAALAYAPDESMLLNFLGYSMVERHENLAEA 498 Query: 280 EVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 E +L K +++ P+ A I + + L + E E E + ++ Sbjct: 499 EKLLRKAHQLS--PDDAAITDSLGWVRAERGDLNEALDLLEKAAEKTPEDPEVNYHLGEV 556 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G +A + +A+ + P L+ A +++A K A A D Sbjct: 557 YWRQGRKTEAIDQWNVALGLHPIPSDEVLIRAALKRAGVEPDVKKADQAAPAKVAPQD 614 >gi|182412419|ref|YP_001817485.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177839633|gb|ACB73885.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 795 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 77/239 (32%), Gaps = 13/239 (5%) Query: 127 VQI-ALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDIS 184 Q A + + A E LQ+ A L Y + G L A + A+ S Sbjct: 543 AQTLARMPGRRDDAIRHYETALQLRPDDVRAHNGLAYLLAQIPGRLPEAIAHGEAAVAAS 602 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMI 243 P P + + E A + + + A E A + G Sbjct: 603 PRDPQAHYQLANALAVRPE--GAAEAI-RHYEIALELEPQLAPAHYGLANTLVHLPGRSA 659 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP-----HPEIAN 297 + +L L + A I A L S +R+ A E ++NP H +A Sbjct: 660 EAVTHYERALALDPGFLEAHINLANLLTSIEPRREEAIAHYEAALRLNPNLPWVHHNLAL 719 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ +N + ++++ + + + G QA A A++ P Sbjct: 720 VLAQ-DPAQARAAMQHCEEALRLNPDYLDAMNSLGILYAQQGDTAQARAVWQRALQKDP 777 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 10/135 (7%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL-NSAQRYATKALDISPDAPWV 190 + A E L + A +L I A + AL ++P+ PWV Sbjct: 654 LPGRSAEAVTHYERALALDPGFLEAHINLANLLTSIEPRREEAIAHYEAALRLNPNLPWV 713 Query: 191 TEAVVQQYVLAKEWSRAITFL---NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + VLA++ ++A + + + ++ L I + + GD + Sbjct: 714 HHNL--ALVLAQDPAQARAAMQHCEEALRLNPDYLDAMNSLGILYAQQ----GDTAQARA 767 Query: 248 DAIESLKLCDNSIMA 262 +L+ A Sbjct: 768 VWQRALQKDPAFAPA 782 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 54/200 (27%), Gaps = 15/200 (7%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 +IA +A + + E A E+ L++ Sbjct: 591 AIAHGEAAVAASPRDPQAHYQLAN---------ALAVRPEG-AAEAIRHYEIALELEPQL 640 Query: 154 EFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFL 211 A Y L + G A + +AL + P + + AI Sbjct: 641 APAHYGLANTLVHLPGRSAEAVTHYERALALDPGFLEAHINLANLLTSIEPRREEAIAHY 700 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + L + + D A+ E+L+L + + A Sbjct: 701 EAALRLNPNLPWVHHNLALVLA---QDPAQARAAMQHCEEALRLNPDYLDAMNSLGILYA 757 Query: 272 SQNKKRKAEVILEKIWKVNP 291 Q +A + ++ + +P Sbjct: 758 QQGDTAQARAVWQRALQKDP 777 >gi|307299888|ref|ZP_07579673.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti BL225C] gi|306904777|gb|EFN35360.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium meliloti BL225C] Length = 624 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 14/148 (9%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + L + + + + +++ L + A A++ +Q K +A ++ Sbjct: 420 AEAHASLGLALSLRERHSEAMAEFDQAITLDPDLFEAHYFYARACFTQGKLDEAARHFQR 479 Query: 286 IWKVNPHPE-------IANIYTHLLSE---NTVGK--LKRALRLEEINKESVESLVIVSK 333 + P+ + N+ L E NT + + RA R + E+ + + Sbjct: 480 AADIK--PDDYQALLVLINVLRSLGREQEMNTAAREGVARAERELMMRPENPRPAYLGAV 537 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +G +D+A A A+ P + Sbjct: 538 GLAALGELDRAKEWAGRALATDPDDRLA 565 >gi|307247717|ref|ZP_07529755.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306855747|gb|EFM87912.1| hypothetical protein appser2_7080 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 391 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 84 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 144 SLTQLMTVYQKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 204 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIEKIKACY 259 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYPSMITF 318 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341 >gi|303252344|ref|ZP_07338510.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302648803|gb|EFL78993.1| hypothetical protein APP2_1320 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 398 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 91 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 151 SLTQLMTVYQKTKEWKKAVNVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIEKIKACY 266 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYPSMITF 325 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348 >gi|262305035|gb|ACY45110.1| acetylglucosaminyl-transferase [Scutigerella sp. 'Scu3'] Length = 290 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVAEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAITSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 15/174 (8%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148 GL++ A + ++ + H + L L I + A + + Sbjct: 33 KGLVA-------EAEECYNTALRLCPTHADSLNNL--ANIKREQGYTEEATRLYLKALEV 83 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P A +L + G LN A + +A+ I P + ++ A+ Sbjct: 84 FPEF-AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGAL 142 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + + + A + + D G++ + +LKL + A Sbjct: 143 QCYTRAIQINPAF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDA 192 >gi|260793009|ref|XP_002591506.1| hypothetical protein BRAFLDRAFT_105272 [Branchiostoma floridae] gi|229276712|gb|EEN47517.1| hypothetical protein BRAFLDRAFT_105272 [Branchiostoma floridae] Length = 1637 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 58/189 (30%), Gaps = 44/189 (23%) Query: 134 RQYNIAHEKLEM---MLQIPATREFA-------VYSLYFESC--------RIGDLNSAQR 175 Y+ A +E M +T + + R GD A Sbjct: 865 GDYHKAKSYIEQALQMCSSQSTIQAGNASLAIVLRDYMISQLITLADIWTRFGDNRKAIS 924 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 YA KAL I + + + + ++ L +N ++ + + A + Sbjct: 925 YAEKALQIFRSS-------YGECSVHHGIAGSLDILGTAWQNLGDYRKAAMYMEQALQMH 977 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW-------- 287 G A + AI + + A K ++ RKA+ E+ Sbjct: 978 KDLYGQNGAHPNIAI-----------SLVNAGKVIVELGDLRKAKKYYEEALQMTRDFYG 1026 Query: 288 KVNPHPEIA 296 + HPEIA Sbjct: 1027 QSAVHPEIA 1035 >gi|146329322|ref|YP_001209473.1| tetratricopeptide repeat protein [Dichelobacter nodosus VCS1703A] gi|146232792|gb|ABQ13770.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A] Length = 381 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 107/350 (30%), Gaps = 36/350 (10%) Query: 45 LSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGL---MSIAAHNIP 101 L L L AW + V + + K +A + GL ++ Sbjct: 5 LVTLLLPLAAWS-GWWV---------AMRKEVRDLRKSKSREAYFEGLSFLLNDQTGQAI 54 Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REFAV 157 + + QQ + L L + + + A + +L P R+ Sbjct: 55 DVFLSMAEIDQQTFDNQLTLGTLFRKR-----GELDRALHLHQQLLDYPNATPLQRQSVA 109 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y L + + G A+ D V + + Y +W AI + + Sbjct: 110 YELAEDCIQAGMYEQAKHLLESLRDEHFRLKDVLNTLYRLYERTADWQGAIKARELWQNS 169 Query: 218 A-KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + A + + + A++ + +L++ A + A+ Q + Sbjct: 170 GFGDCRQQIAHYYCEIAQRALAQNETQAAHAAVVSALQIDARCGRAYLMRAQLAEQQGEY 229 Query: 277 RKA----EVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A + I E+ P P + Y H+ E+ LE+ E + Sbjct: 230 VSAIHSYQSIAEQALDFLPEILPFLMKAYQHIDREDEY-----LAWLEQKEAEQPFVRLT 284 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++ + + A L K LLLA + + + + LY Sbjct: 285 LALVHIL--EKRAPDAALQLLEKRLQTSANPLLLADYLRLHQSDDIRALY 332 >gi|150375980|ref|YP_001312576.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae WSM419] gi|150030527|gb|ABR62643.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae WSM419] Length = 643 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 15/197 (7%) Query: 208 ITFLNQKKKNAKEWNRNRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDNSI 260 L++ + + RA L + A D+ ++ ++++L N Sbjct: 397 RALLHRALELDPGYAAARASLGMTYIVDFVQNLTGRATVTDVETGLSESRQAVRLDPNLA 456 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHLLS-ENTVGKLKRA 314 + + L + A ++ ++NP+ P+ +A S + V +RA Sbjct: 457 VGYQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERA 516 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 RL + E + + G +D+A + APR+ LL+ + + Sbjct: 517 RRLHPMAPEYY--TYVYGQALYAAGRLDEADEVLRECLIRAPREPDCLLIQTAVLSQRGD 574 Query: 375 TDKILYWTQSALHAMPD 391 A P+ Sbjct: 575 AQGAQRTMARLTEADPE 591 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 17/155 (10%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI---MASICA 266 L + + A++ L A + D + A + + + Sbjct: 376 VLQARNRYKHGSKDAEALIASRALLHRALELDPGYAAARASLGMTYIVDFVQNLTGRATV 435 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEIN 321 ++ R+A + P +A Y L + + G ++ A R E+N Sbjct: 436 TDVETGLSESRQAVRL---------DPNLAVGYQVLSFGLSATGDYPGAMQAAQRAVELN 486 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +SL+ ++K + GS D+A A A ++ P Sbjct: 487 PNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHP 521 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 10/160 (6%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ + + +A+ + P+ + + ++ A+ Q + A E N N Sbjct: 437 DVETGLSESRQAVRLDPNLAVGYQVLSFGLSATGDYPGAM----QAAQRAVELNPNDPDS 492 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEKI 286 L+A + G + +A + +L + ++L + + +A+ +L + Sbjct: 493 LMALAKAQVRFGSYDEAVQNAERARRLHP-MAPEYYTYVYGQALYAAGRLDEADEVLREC 551 Query: 287 WKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKE 323 P P+ + + G + RL E + E Sbjct: 552 LIRAPREPDCLLIQTAVLSQRGDAQGAQRTMARLTEADPE 591 Score = 37.6 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 45/124 (36%), Gaps = 7/124 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD A + A +A++++P+ P A+ + V + A+ + ++ Sbjct: 468 ATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPEYY 527 Query: 226 AILL--IARSLENADKGDMIASYHDAIESLKLCDN--SIMASICAAKSLISQNKKRKAEV 281 + + D+ D + I + + + I ++ + + +Q +R Sbjct: 528 TYVYGQALYAAGRLDEADEVL-RECLIRAPR-EPDCLLIQTAVLSQRG-DAQGAQRTMAR 584 Query: 282 ILEK 285 + E Sbjct: 585 LTEA 588 >gi|260433052|ref|ZP_05787023.1| putative TPR/sulfotransferase domain protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416880|gb|EEX10139.1| putative TPR/sulfotransferase domain protein [Silicibacter lacuscaerulensis ITI-1157] Length = 565 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 14/198 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G + A Y+ + LD P + + + + + W + +K KN + + Sbjct: 100 MQTGQIAQALAYSERMLDKFPGNTEIIRVIDEIKLKGQNWRSIVENATEKLKNDPDNPK- 158 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LL +R G + AS D + +L + + + A L K IL Sbjct: 159 ---LLASRGRAYGKLGFVEASSRDIARAYELAPDDMGIAFRKAVDLHQAGDKTGCAEILW 215 Query: 285 KIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI-------A 335 +I + PH A + + + E L + + +S + +K Sbjct: 216 RILEQEPHHISALYQLSSMVDREQATSLLPQVEA-AMAELDHKDSTLEFAKAQLESKIEG 274 Query: 336 LEMGSIDQAHAKAMLAMK 353 LE A A A + Sbjct: 275 LEAALPQFARANAAQHAE 292 >gi|195591395|ref|XP_002085426.1| GD14782 [Drosophila simulans] gi|194197435|gb|EDX11011.1| GD14782 [Drosophila simulans] Length = 931 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 17/240 (7%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDE--- 683 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + E++++ + + + Q + A K P I Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPT-SIPLWILSA 740 Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358 E G L +A LE + + V+ + L G + A A++ P Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNA 800 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR ++ K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVVRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|126728310|ref|ZP_01744126.1| TPR domain protein [Sagittula stellata E-37] gi|126711275|gb|EBA10325.1| TPR domain protein [Sagittula stellata E-37] Length = 571 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 74/207 (35%), Gaps = 9/207 (4%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-AQRYATKALD 182 LL + QY +A + E + +R AV E+ R D + A + Sbjct: 295 LLAGDLLSDMGQYELAEQVFEEVPTDDPSRHAAVLG-EAEALRDQDKTAQAIAVLETLAE 353 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 PD P V + + + + A+T + ++ + L AR++ + Sbjct: 354 QQPDLPVVHTTLGDIFRQEQRYEDAVTAYTKALSLYEQESERLWFLYYARAISYERQEKW 413 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKK-RKAEVILEKIWKVNPHPEI------ 295 + D ++L L SL+ Q++K +A ++E+ P+ Sbjct: 414 EEAEADFRKALDLNPEQPQVLNYLGYSLVEQHRKLDEALNMIERAVAARPNSGYIVDSLG 473 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINK 322 +Y E V ++RA L I+ Sbjct: 474 WVLYRLGRYEEAVPHMERAAELMPIDP 500 Score = 38.0 bits (87), Expect = 4.1, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 10/160 (6%) Query: 125 LEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + A + A E + P E ++ E +G+ A A + + Sbjct: 32 LAARQASFLGDFASAAHYYERALAFDPGRAELLERAILAE-MSLGNFGKAALLAERMAEA 90 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 ++ A + V ++ ++ I ++ K+ + + ++ GDM Sbjct: 91 GNESQIAQMAALTTAVESESFANVIQSIDDKRGIGPLADG------LVKAWAQLGAGDMS 144 Query: 244 ASYHDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVI 282 A+ + +++ AS A +L S A I Sbjct: 145 AALIE-FDNVAKMPGLGPFASYHKALALASVGDFESAAAI 183 >gi|194333717|ref|YP_002015577.1| Tetratricopeptide domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311535|gb|ACF45930.1| Tetratricopeptide domain protein [Prosthecochloris aestuarii DSM 271] Length = 1339 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 22/218 (10%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L D A+ +K + ++ L + +A T L++ + K Sbjct: 621 LLDLKRLDPDNLQARTELSKIYQQQKKWKEAGDILLDLKRLDPDNLQARTELSKIYQQQK 680 Query: 220 EWNRNRAILLIARSLEN------ADKGDMIASYHDAIES-------LKLCDNSIMASICA 266 +W ILL + L+ + + E+ +L +++ A Sbjct: 681 KWKEAGDILLDLKRLDPDNLQARTELSKIYQQQKKWKEAGDILLDLKRLDPDNLQARTEL 740 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP---HP--EIANIYTHLLS-ENTVGKLKRALRLEEI 320 +K Q K ++AE IL + K+ P HP E++ IY + L L L+ + Sbjct: 741 SKIYQQQKKWKEAEDILLEEIKIAPDALHPRTELSKIYQQQKKWKEAKDIL---LDLKRL 797 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + +++++ +SKI + +A + +KIAP Sbjct: 798 DPDNLQARTELSKIYQQQKKWKEAEDILLEEIKIAPDA 835 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 75/229 (32%), Gaps = 41/229 (17%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE---------------- 203 L D A+ +K + ++ L + Sbjct: 689 LLDLKRLDPDNLQARTELSKIYQQQKKWKEAGDILLDLKRLDPDNLQARTELSKIYQQQK 748 Query: 204 -WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 W A L ++ K A + R S + + ++ +L +++ A Sbjct: 749 KWKEAEDILLEEIKIAPDALHPR----TELSKIYQQQKKWKEAKDILLDLKRLDPDNLQA 804 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP---HP--EIANIYTHLLSENTVGKLKRALRL 317 +K Q K ++AE IL + K+ P HP E++ IY K K+A + Sbjct: 805 RTELSKIYQQQKKWKEAEDILLEEIKIAPDALHPRTELSKIYQQ------QKKWKKAEDI 858 Query: 318 ----EEINKESVESLVIVSKIALEMGSIDQAHAKAM-----LAMKIAPR 357 +I +++ +SKI + +A + A ++ PR Sbjct: 859 LLEEIKIAPDALHPRTELSKIYQQQKKWKEAEDILLESLYIDAEQLHPR 907 >gi|71898475|ref|ZP_00680647.1| TPR repeat [Xylella fastidiosa Ann-1] gi|71731788|gb|EAO33847.1| TPR repeat [Xylella fastidiosa Ann-1] Length = 690 Score = 45.3 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 77/228 (33%), Gaps = 14/228 (6%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G L+ A++ + A I D P + + + +A+ L+Q + E Sbjct: 110 AIARGALDEAEQLSRTAARIISDHPQLLAVNATITLHRGQVDQALAMLSQAVELLPE--- 166 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L + KG + + ++L + I A+ Q + A IL Sbjct: 167 -EPAVLFSLGFAYLQKGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRIL 225 Query: 284 EKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E+ P + ++ L++ N L ++ E +L + ++ Sbjct: 226 EEA-LSLPEGDTPALHRLTGEFELMAGNPDRALPHLRQVLATWPEDPRTLEALLTAWKQL 284 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD---KILYWTQ 383 D A A+ I PR L A++ A + + I W Sbjct: 285 DMDDDARVTLDAALDIKPRNHDLWL-ARLSVAPVGSDEARIVIERWLS 331 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 34/301 (11%) Query: 92 LMSIAA----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L+++ A H + + + E V L + A + ++ Sbjct: 136 LLAVNATITLHRGQVDQALAMLSQAVELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVI 195 Query: 148 QIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWS 205 ++ V +L + + R G L+ A R +AL + D P + + ++A Sbjct: 196 ELNP-HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELMAGNPD 254 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 RA+ L Q E R LL A + D D + A++ + Sbjct: 255 RALPHLRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKPRNHDL-----W 308 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KE 323 A+ ++ +A +++E+ + + E+ L ++ + Sbjct: 309 LARLSVAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQN 351 Query: 324 SVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + E+ V++ +A+E G + ++ P + L IE H + W Sbjct: 352 NPEAAETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVACLQQLIESVPEHERTILRPW 411 Query: 382 T 382 Sbjct: 412 L 412 >gi|284051652|ref|ZP_06381862.1| peptidase S1 and S6 chymotrypsin/Hap [Arthrospira platensis str. Paraca] Length = 764 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 4/132 (3%) Query: 161 YFESCRIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 ++ D A Y +A+ + P+ W + E AIT + + Sbjct: 178 LGQALAQVDKAEEATGYYRRAIALEPEFFWSYLKLADVLKSMGETDEAITMYRRANQIDP 237 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E + L L ++ + + +++++ + + A +L SQ ++A Sbjct: 238 EASAWSHYNL---GLALYEQNQIDEAISCYRQAIRVDPDFFWPHLKLADALSSQGHNQEA 294 Query: 280 EVILEKIWKVNP 291 + + ++NP Sbjct: 295 IAMYHRAIELNP 306 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 4/166 (2%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 YL + + + + A Q P ++ Y+L ++ A +A Sbjct: 208 SYLKLADVLKSMGETDEAITMYRRANQIDPEASAWSHYNLGLALYEQNQIDEAISCYRQA 267 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + PD W + AI ++ + + A + +L +G Sbjct: 268 IRVDPDFFWPHLKLADALSSQGHNQEAIAMYHRAIELNPDVTPW-AYYNLGDALNT--EG 324 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + ++L + A + +L N+ +A + +K Sbjct: 325 KYEEAITCYHQALNIDPQLFQAYVRLGDTLDQLNQHTEATDMYKKA 370 >gi|291614668|ref|YP_003524825.1| hypothetical protein Slit_2210 [Sideroxydans lithotrophicus ES-1] gi|291584780|gb|ADE12438.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1] Length = 736 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 7/191 (3%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +A + +AL I P A A++ + A A LL+ Sbjct: 49 EAALQALERALSIEPRHIQARCAKGAVLCDLGRSQEALSVYRKALHLAPA----DAQLLL 104 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---VILEKIW 287 + GD A+ +L+ A + LI + + A L ++ Sbjct: 105 NMGIVLERMGDQNAALERYDLALRHHPEFASALLNRGSMLIRLGRLQDALDNNRRLVGLY 164 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 H + + + L R +N S ++ + D+A + Sbjct: 165 PEWEHAQFNLGESLMALSRWEEGLAAYERAVALNPRSAKAHFSAGLALAMLKRFDRARQE 224 Query: 348 AMLAMKIAPRK 358 + I P Sbjct: 225 FLTTQVIDPAA 235 >gi|261365656|ref|ZP_05978539.1| tetratricopeptide repeat protein [Neisseria mucosa ATCC 25996] gi|288565819|gb|EFC87379.1| tetratricopeptide repeat protein [Neisseria mucosa ATCC 25996] Length = 389 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 106/352 (30%), Gaps = 59/352 (16%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 AR++ + QQ ++ L ++ + + A + +L P T Sbjct: 57 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQALLDSPDT------- 106 Query: 160 LYFESCRIGDLNSAQRY-----ATKALDISPDA------PWVTEAVVQQYVLAKEWSRAI 208 E AQ Y +A I + ++ Y ++W +AI Sbjct: 107 -VNEKRARVLFELAQNYQSAGLVDRAEQIFIGLQEGNMAREARQHLLSIYQQDRDWEKAI 165 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASIC 265 + + + A + K ++ A+ A+++ K C A++ Sbjct: 166 ETAQLLSHDEQTYQFEIAQFYCELAQTALFKSNLDAARYNVQKALDANKKCAR---ANMI 222 Query: 266 AAKSLISQNKKRKAEV---ILEK---IWKVNPHPEIANIYTHL-LSENTVGKL----KRA 314 Q A +E+ + ++ Y E + +L + Sbjct: 223 LGDIETKQGNFPAAVEAYGAIEQQNHAYLSMVGEKLYEAYAAQDKQEEGLNRLIGYMQTF 282 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQ 369 L+ IN ++ + AL + +A A+ ++ P ++ LL + + Sbjct: 283 PDLDLIN--------VIYEKALLLKGESEAAQLAVELVRQKPDLNGVYRLLGLKISDMNP 334 Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 A + D + L ++ + + S W P F Sbjct: 335 AWKADADMMRSVIGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACNKWETF 382 >gi|223939204|ref|ZP_03631086.1| TPR repeat-containing protein [bacterium Ellin514] gi|223892157|gb|EEF58636.1| TPR repeat-containing protein [bacterium Ellin514] Length = 321 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 78/225 (34%), Gaps = 15/225 (6%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + P T + +Y + ++ +L+ A + + PD P + ++ Sbjct: 91 EKAYVTSKHDPRT---GM--MYALALKMNKELSKAYSVDKEMVAEHPDIPQLQFSLATLE 145 Query: 199 VLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + +++ A+ L K A +++ + L G + + Sbjct: 146 MTIQKYDEAVAILEPLWAKAPANLPEKDKGTINFMLGLCYLYNGQHAKAISSLENANSHF 205 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKR 313 N+ M ++ + + KA+ LEK +NP A Y + S ++ K Sbjct: 206 PNAGMIYNVLGEAYLKGGEPDKAKDFLEKALAINPKLPSALYYRGICLERSGDSEHANKC 265 Query: 314 ALRLEEINK----ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 K ++ E +++++ ++ ++A A ++ Sbjct: 266 FQECYRFGKDWLRDNGEDYYLMAQVCSKISKQEEADDYRKQASQL 310 >gi|302039657|ref|YP_003799979.1| hypothetical protein NIDE4395 [Candidatus Nitrospira defluvii] gi|300607721|emb|CBK44054.1| protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 345 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 6/204 (2%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL + + M SY + QI +A ++ + Sbjct: 94 LVQGLFLAQSGQSE--QSMASYKEAAKLAPQSAYPHYFLAQIHERADHLEMAIKEYREAV 151 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 ++ A +L G L A + + ++P+ + ++ A Sbjct: 152 KLAPAFAPARTNLGVAYQEQGRLEMAIPQYREVIKLNPNDALAHANLGCALAEQGKFEPA 211 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + Q K A N + + + A KG M + + E+ +L A Sbjct: 212 L----QAYKEALRLNPSDSEIHFALGGVYETKGRMDLALREYREATQLNPEFASAHTALG 267 Query: 268 KSLISQNKKRKAEVILEKIWKVNP 291 L+ Q++ +A K K NP Sbjct: 268 WLLMEQSRASEAMESFSKAVKANP 291 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 89/297 (29%), Gaps = 24/297 (8%) Query: 98 HNIPLARKMHSYVSQQ---------------HTFHNEYLVYLLEVQIALAERQYNIAHEK 142 A +MH+ Q+ +L++ Q + Sbjct: 53 GEFADAWRMHARALQETDDIERVREWVHSIVDRHAGNAQTHLVQGLFLAQSGQSEQSMAS 112 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + ++ + Y L R L A + +A+ ++P + Y Sbjct: 113 YKEAAKLAPQSAYPHYFLAQIHERADHLEMAIKEYREAVKLAPAFAPARTNLGVAYQEQG 172 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 AI + + + N N A+ A++G + E+L+L + Sbjct: 173 RLEMAI----PQYREVIKLNPNDALAHANLGCALAEQGKFEPALQAYKEALRLNPSDSEI 228 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEE 319 ++ + A + ++NP A+ + + ++ + + Sbjct: 229 HFALGGVYETKGRMDLALREYREATQLNPEFASAHTALGWLLMEQSRASEAMESFSKAVK 288 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLA--MKIAPRKEIFLLLAQIEQANSHN 374 N E ++L + +I G + A A + P K+ ++ A + + Sbjct: 289 ANPEEAQALYGIGRIYAAKGKRESAAENFSKAIRFEKDPTKKNAIMNALFASGQTGD 345 >gi|262305011|gb|ACY45098.1| acetylglucosaminyl-transferase [Hexagenia limbata] Length = 287 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + H + L L I + A L + A Sbjct: 34 GQVSEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 92 SNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + H +LKL + A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIHSYRTALKLKPDFPDAYCNLAHCL 200 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIHSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|291613072|ref|YP_003523229.1| methyltransferase type 12 [Sideroxydans lithotrophicus ES-1] gi|291583184|gb|ADE10842.1| Methyltransferase type 12 [Sideroxydans lithotrophicus ES-1] Length = 931 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 42/123 (34%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL+ + A + + +L++ A ++L S ++G + Y AL+ Sbjct: 19 LLQAVELHQAGRLQEAEQCYQAILKLDPHHAKANHNLGVLSVQMGQSEAGLAYFAAALEA 78 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P + + LA + A L +++ + + A+ + G Sbjct: 79 DPAHGQYWLSYIDTLHLAGQSEEARQVLALARQSGLQGDDVDALEASLEGAGLSGAGHQP 138 Query: 244 ASY 246 S Sbjct: 139 ESA 141 >gi|163794023|ref|ZP_02187996.1| TPR repeat [alpha proteobacterium BAL199] gi|159180637|gb|EDP65156.1| TPR repeat [alpha proteobacterium BAL199] Length = 619 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 83/266 (31%), Gaps = 47/266 (17%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-------------- 176 LA + A E +L+ T A+ L + R G+++ A Sbjct: 14 LAAGRVTEAKAIFENLLRAEPTHVRALCGLGTIALRGGEVSRALELIGHAVAIAPTDGMT 73 Query: 177 --------------------ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +ALD+ P P + + + + ++ Sbjct: 74 VGNLGVVYLAQNKLIEAEDCFRRALDLEPSQPELHANFASTLLARGD----RETALKAQR 129 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A + + A G +L++ N + A + + Sbjct: 130 RAVDLASDSAAQRFNLGNVLVAVGRSAEGAEAYESALEIEPNHVGALNNLSILHKKAGRL 189 Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLL-----SENTVGKLKRALRLEEINKESVESLVI 330 A+ +L++ +P +PE+ + +L + + ++RA + + Sbjct: 190 DAAQALLDEAQLHDPMNPELMANHADILLQRGHCDQALEIMRRA---AGQAPGNPALQLS 246 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 + + +E+G + +A + A + AP Sbjct: 247 LGTMLMELGRLTEAGQELANATRKAP 272 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 12/185 (6%) Query: 95 IAAHNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 +A + A K + L +L + E E L+I Sbjct: 116 LARGDRETALKAQRRAVDLASDSAAQRFNLGNVLVA-----VGRSAEGAEAYESALEIEP 170 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ +L + G L++AQ +A P P + + +A+ + Sbjct: 171 NHVGALNNLSILHKKAGRLDAAQALLDEAQLHDPMNPELMANHADILLQRGHCDQALEIM 230 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + A L ++ + G + + + + + S ++ + L Sbjct: 231 RRAAGQAP----GNPALQLSLGTMLMELGRLTEAGQELANATRKAPESPDIALALGRLLR 286 Query: 272 SQNKK 276 QN+ Sbjct: 287 RQNQL 291 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 81/281 (28%), Gaps = 18/281 (6%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIA---LAERQYNIAHE 141 A G+ + LA+ + E L A LA A + Sbjct: 67 APTDGMTVGNLGVVYLAQNKLIEAEDCFRRALDLEPSQPELHANFASTLLARGDRETALK 126 Query: 142 KLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + A + F + ++ R + A AL+I P+ + + Sbjct: 127 AQRRAVDLASDSAAQRFNLGNVLVAVGRSAEGAEAY---ESALEIEPNHVGALNNLSILH 183 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A A L++ + + L+ + +G + + Sbjct: 184 KKAGRLDAAQALLDEAQLHDP----MNPELMANHADILLQRGHCDQALEIMRRAAGQAPG 239 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHL--LSENTVGKLKRAL 315 + + L+ + +A L + P P+IA L A Sbjct: 240 NPALQLSLGTMLMELGRLTEAGQELANATRKAPESPDIALALGRLLRRQNQLDAAQAAAD 299 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 R ++ + + V+ +++ L G + A K ++P Sbjct: 300 RAVNLSVKPGAAGVLATELLLMRGRYEAAWDKLDALASLSP 340 >gi|115379756|ref|ZP_01466830.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] gi|115363243|gb|EAU62404.1| TPR-domain containing protein, putative [Stigmatella aurantiaca DW4/3-1] Length = 350 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 90/270 (33%), Gaps = 37/270 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + + + A+ K L + P+ P + + ++ A+ L KN + Sbjct: 1 MARLHLAQQEADKARPLLEKLLALDPEHPEARGFLARLKAEGEKDEGALDELRALAKNPE 60 Query: 220 E-----WNRNRAILLI-------ARSLENADKGDMI---------------ASYHDAIES 252 +N A+LL+ A++ A K A++ Sbjct: 61 AGFIEFYNLGHALLLLPGKEAEAAQAFVQALKVAPKNPHATTYLGVAVWKQGQLPQALKC 120 Query: 253 LKLCDNSIM----ASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSE 305 K A+K L+ + KA++ L+K + P PE+ + + + Sbjct: 121 FKYAATLAPRESLPLQLASKVLVQLGQVGKAQLALQKALQRAPQKPELHEDFIKLCIFAN 180 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLL 363 LK + +++ ++ + + L G++ +A A+ +AP+ L Sbjct: 181 KPKLALKSVIDFRQLDPKNPNGPYLQGLVMLLSGNLSEARRTFREAVALAPQAWEPKLGL 240 Query: 364 LAQIEQANSHNTDKILYWTQSALH-AMPDP 392 + + L + A+ A +P Sbjct: 241 ARALLIGEQKEVAEALKLLEEAVALAPTEP 270 >gi|288962803|ref|YP_003453097.1| TPR repeat-containing protein [Azospirillum sp. B510] gi|288915069|dbj|BAI76553.1| TPR repeat-containing protein [Azospirillum sp. B510] Length = 571 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 81/254 (31%), Gaps = 16/254 (6%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIG 168 H + L +LL IA + +N A + + P R A E+ R+ Sbjct: 298 ALHLRDDLALAHLLIGDIAASRGHHNEALATFKRLETDPLLRWTAR---MREADSLVRLD 354 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A P+ + Y AK ++ AI + L Sbjct: 355 RDDDAIAILKDLAAERPERTDAIIRLGDIYRYAKRYAEAIPAYGTALERIGTPQERHWPL 414 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVILEKIW 287 L AR++ G + D +L L + S I + + KA ++E+ Sbjct: 415 LYARAMCYERTGQWPQAEADLQRALTLRPDEPSLLNFLGYSWIDRGEHLDKARAMVERAV 474 Query: 288 KVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ P +Y + V KL+RA E+ + G Sbjct: 475 ELRPRDGYIVDSLGWALYKLGDYDAAVAKLERA---VELKPGDPTINDHLGDAYWRAGRR 531 Query: 342 DQAHAKAMLAMKIA 355 ++A + A++ A Sbjct: 532 NEARFQWTRALRNA 545 >gi|262305019|gb|ACY45102.1| acetylglucosaminyl-transferase [Periplaneta americana] Length = 288 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|223936382|ref|ZP_03628294.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223894900|gb|EEF61349.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 614 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 24/211 (11%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 Y E+ R D A P+ P + A+ Q + ++ S A L + Sbjct: 410 YLEASRYED---ALPIFEGLFRSFPERPELGHALFQCQLTLRKLSEATETLEVVLEGLPA 466 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK----- 275 + L+ R+ KG + + E+ +L A L+ + Sbjct: 467 GIWS----LLPRAELCLAKGQIQEARALVNEARQLHPTHPDALRRLGLLLLRLREWNALE 522 Query: 276 --KRKAEVILEK---IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 R+A + + W L + + AL+ ++N E+ + Sbjct: 523 DLARQALKLDDNDALAWA-------GLAEAQLRKQLAAEATESALKAIQLNYYLSEAHFV 575 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +++ + G QA + +++ P Sbjct: 576 LARALVAKGKWAQARDAMQVLLQLQPNNRAA 606 >gi|218782177|ref|YP_002433495.1| hypothetical protein Dalk_4348 [Desulfatibacillum alkenivorans AK-01] gi|218763561|gb|ACL06027.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 443 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 82/221 (37%), Gaps = 13/221 (5%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A R +AL + A V ++ + + ++ +A+ + + + + Sbjct: 202 DNDVQGAIREYERALLVDSGAVNVHNSLGVCFAVLGDYPKALDRFDMASQ----LDPSEI 257 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + + G+ + +++ ++ + + K +S+ + KA L K Sbjct: 258 MPVYNTGVSHLMMGNRDKALELFLQAGEIEPDLFELLLETGKIYLSKGRTDKALDYLNKA 317 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 N H + + Y + N K + N E ESL ++ ++G Sbjct: 318 VASNQDAWTGHKYLGDCYMEM--GNPSEAAKAYANAVKCNPEEAESLSSLAVAYDQIGEN 375 Query: 342 DQ-AHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380 + A + A +++IAP + +A I + + + Sbjct: 376 PEIALSFATQSIEIAPENALCQYRMASILEKRGELHKAVRH 416 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 4/124 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A ++ +M Q+ + VY+ +G+ + A +A +I PD + Sbjct: 237 GDYPKALDRFDMASQLDPSEIMPVYNTGVSHLMMGNRDKALELFLQAGEIEPDLFELLLE 296 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Y+ +A+ +LN+ + ++ L + G+ + ++ Sbjct: 297 TGKIYLSKGRTDKALDYLNKAVASNQDAWTGHKYLGDCY----MEMGNPSEAAKAYANAV 352 Query: 254 KLCD 257 K Sbjct: 353 KCNP 356 >gi|158522425|ref|YP_001530295.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511251|gb|ABW68218.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] Length = 589 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 7/175 (4%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFES 164 ++ + + H + + + L L + + + A + P +L Sbjct: 414 LYRHAAALHPGNIQAVTNL--ADTLLEKGRIDEAIAFYRQALSMDPENALV-HNNLGAAF 470 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GD A +AL P P + V AI + + Sbjct: 471 LKAGDRQRAAAGFRQALKYDPGHPMAGNNLGNLLVEMGRTDEAIACFEKTLTPDNPFLYK 530 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A KG+ + ++L + + A + L+ Q + A Sbjct: 531 ---AHNNIATAFARKGEFDKAVFHLRQALAIQPDYATARENLVRLLMMQQQGAAA 582 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 44/173 (25%), Gaps = 12/173 (6%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A + P + + AI F Q E A++ Sbjct: 416 RHAAALHPGNIQAVTNLADTLLEKGRIDEAIAFYRQALSMDPE----NALVHNNLGAAFL 471 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNP 291 GD + ++LK MA L+ + +A EK + Sbjct: 472 KAGDRQRAAAGFRQALKYDPGHPMAGNNLGNLLVEMGRTDEAIACFEKTLTPDNPFLYKA 531 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 H IA + E L I + + + ++ + A Sbjct: 532 HNNIATAFAR-KGEFDKAVFHLRQALA-IQPDYATARENLVRLLMMQQQGAAA 582 >gi|21229212|ref|NP_635134.1| hypothetical protein MM_3110 [Methanosarcina mazei Go1] gi|20907782|gb|AAM32806.1| hypothetical protein MM_3110 [Methanosarcina mazei Go1] Length = 393 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 30/159 (18%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISP 185 ++ L E + + E L+ + P T L R+G+ A + KAL+I P Sbjct: 249 ARVRLCEERLRESEEALKKNPEDPDTLFKIGKIHL-----RLGEQEKAIQAFKKALEIKP 303 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + A A+ + + ++ + +KG+ Sbjct: 304 ENAEAWQFRGKVLFKAGSEKEALHAFEKATRLKPDY-----------AEAWFEKGNAFLK 352 Query: 246 YHD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A + K AA+ S+ K KAE Sbjct: 353 LENLKGAENAFK----------IAARLWDSKGIKSKAES 381 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 29/265 (10%), Positives = 80/265 (30%), Gaps = 26/265 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 AR+ ++E + + + +A E + +L+ A++ Sbjct: 122 ESAGARERRHGNEGTKALYDEGVTL-------YRQGRLKLALEAFDSVLEANPLDFAALF 174 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-- 216 ++ A +A +I+ + + + + + + ++ + Sbjct: 175 HKGNALLKLKRYEEALEVFERASEINQENAGLWTNLGFIFTKLERFRDSLEAFEKSISLN 234 Query: 217 --NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 W A++ R E ++ E+LK K + Sbjct: 235 PVQKNAWEGRDAVIARVRLCE--------ERLRESEEALKKNPEDPDTLFKIGKIHLRLG 286 Query: 275 KKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLV 329 ++ KA +K ++ PE A + + + L + + + E+ Sbjct: 287 EQEKAIQAFKKALEIK--PENAEAWQFRGKVLFKAGSEKEALHAFEKATRLKPDYAEAWF 344 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKI 354 L++ ++ A +A ++ Sbjct: 345 EKGNAFLKLENLKGAENAFKIAARL 369 >gi|86137175|ref|ZP_01055753.1| TPR repeat protein [Roseobacter sp. MED193] gi|85826499|gb|EAQ46696.1| TPR repeat protein [Roseobacter sp. MED193] Length = 741 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 36/294 (12%), Positives = 88/294 (29%), Gaps = 21/294 (7%) Query: 71 MLFHMLHKRNYDKGYKA--LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 + +K A +Y +++ N ++S N ++ Sbjct: 6 SMTKANRLERKNKQEDAAKIYRDILAKFPKNTRAQAALNSLQKNMQRELNPPQELQQKLA 65 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + +L F +L + +L+ A KA +++P P Sbjct: 66 AAFDAGDHAKVASACASLLNSYRRSCFLWNTLGQCHLKSQNLDEAATCLNKACELNPKDP 125 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYH 247 + ++ + + A+ + + + + L + + + Sbjct: 126 AIFSSLGDVHRAQGQIDNALALYKKALSLDGDTLSALNNMANTLTDLGRLAEAEPLLER- 184 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----- 302 + KL S + + L+ + +A+ LE+ ++ PE++ +L Sbjct: 185 ----ACKLAPKSAVILFNYSNVLLRTGRVEQAKTFLEQATELA--PELSGAQYNLAQLQS 238 Query: 303 LSENTVGKLKRALRLEEINKESVESLV--IVSKIALE----MGSIDQAHAKAML 350 L + +KR + E + + + L M Q + L Sbjct: 239 LDGDKEAAIKRFEHILETTPSDDRTRADKLHVQAHLNDWSWMEEYQQFRRQLGL 292 >gi|310819983|ref|YP_003952341.1| tpr domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309393055|gb|ADO70514.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1199 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 9/225 (4%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQ--KKKNAKEWNRNRAI 227 A T A +SP+ P + + L ++ S A+ + K K+ + R+R Sbjct: 620 EKALNMYTNARKLSPEHPLARIGMAESQLALDQDLSLALADMEALGKSKDLVDPLRSRQQ 679 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ R L + D + L + +A A + + K +A+ E Sbjct: 680 LIQGRLLTELGRYDEALALLAQGVKGPLAFDFHLALGDAGR---AAGKLEEAQQAYEAAL 736 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 K+ P E A L + + + L ++ E + ++ + + +A A+ Sbjct: 737 KLQPRSEDA---REGLGRTLLDRDRVKEVLARLDGEGRKVALVRAAAHVRQEDWKRARAE 793 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 + + N D+ + A++ + P Sbjct: 794 LEKTRVNNRYPLEAVGYLALADTMEGNGDQAREILEKAVNGVKKP 838 >gi|284051341|ref|ZP_06381551.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca] gi|291568213|dbj|BAI90485.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 1104 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 89/253 (35%), Gaps = 15/253 (5%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDL 170 + + L + ++ L++ + + +L++ VY + + G + Sbjct: 291 AEKPINPRVLSLQKQAELYLSQGKLEETVATCQEILKLDP-NFLLVYVVLGNALHFQGKI 349 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +SA R +AL+I+P+ V + Y+ + + AI + + + A + Sbjct: 350 SSAIRAYNQALEINPNFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDL----AAVHW 405 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMA-------SICAAKSLISQNKKRKAEVIL 283 G+ A+ + +L+L + + A +I A + Q I Sbjct: 406 NLGRVYQQLGNTEAAINSWKIALELKPDLVEAEFNFEFGNILARRGEYEQAIASYQRAIS 465 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K P+ I + + L++ + +N + E + ++I +M Sbjct: 466 RKPNWAEPYANIG--CLRVQQDRLEEALEQLQKAISLNPKMPEMYLHTARIFTKMRRHQD 523 Query: 344 AHAKAMLAMKIAP 356 A +++ P Sbjct: 524 AINHYQKVIELKP 536 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 74/237 (31%), Gaps = 16/237 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A + + E + L VQ E + + + ++P Sbjct: 451 GEYEQAIASYQRAISRKPNWAEPYANIGCLRVQQDRLEEALEQLQKAISLNPKMPEMYLH 510 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ + R D A + K +++ P+ P + + AI + Sbjct: 511 TAR-IFTKMRRHQD---AINHYQKVIELKPNFPDAYANLANMQATIGQLPEAIANYQKTL 566 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + EW L + + + + ++L+L + A L Sbjct: 567 QLKPEWAEVYCRLA-----HIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 621 Query: 276 KRKAEVILEKIWKV--NPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 KA + ++ W+ P IA I+++ S L + L +I S+E+ Sbjct: 622 LGKARKVADRYWENCGKTLPVLCAIAYIFSYTQSGACEQALAKLEELIKICNNSIET 678 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 12/193 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R G+ A +A+ P+ + V A+ L + Sbjct: 449 RRGEYEQAIASYQRAISRKPNWAEPYANIGCLRVQQDRLEEALEQLQKAISLNP--KMPE 506 Query: 226 AILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L AR + D I Y IE L N A A + + +A + Sbjct: 507 MYLHTARIFTKMRRHQDAINHYQKVIE---LKPNFPDAYANLANMQATIGQLPEAIANYQ 563 Query: 285 KIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K ++ PE A +Y L + + + E+ + E+ + + + Sbjct: 564 KTLQLK--PEWAEVYCRLAHIQKQKEPKEAVANLEKALELKPDFAEAYQQLCDLLSHSTN 621 Query: 341 IDQAHAKAMLAMK 353 + +A A + Sbjct: 622 LGKARKVADRYWE 634 >gi|46581674|ref|YP_012482.1| TPR domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601167|ref|YP_965567.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4] gi|46451097|gb|AAS97742.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120561396|gb|ABM27140.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4] gi|311235314|gb|ADP88168.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio vulgaris RCH1] Length = 207 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 4/117 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL RY +A P P + ++ E +AI L + K ++ + Sbjct: 71 LQRGDLEGCLRYNEEAAQSRPKFPVAWSNIGFVHLQRGEPEKAIAALKKALKWQPDFIQA 130 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A + A +E GD A + + E++K + A A + K+ Sbjct: 131 MATMGAAFYME----GDYEACINISNEAIKKEPSFGPAYNNLALAYFELGDFAKSVK 183 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 11/149 (7%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L S R D +A+ A+ SP + + + + + + ++ Sbjct: 33 GLALLSKR--DFVAAEESFLNAVRNSPRLAEAYVQLGGICLQRGDLEGCLRYNEEAAQSR 90 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ + + +G+ + ++LK + I A + + Sbjct: 91 PKFP----VAWSNIGFVHLQRGEPEKAIAALKKALKWQPDFIQAMATMGAAFYMEGDYEA 146 Query: 279 AEVILEKIWKVNPH--PE---IANIYTHL 302 I + K P P +A Y L Sbjct: 147 CINISNEAIKKEPSFGPAYNNLALAYFEL 175 >gi|15838760|ref|NP_299448.1| hypothetical protein XF2169 [Xylella fastidiosa 9a5c] gi|9107306|gb|AAF84968.1|AE004030_14 hypothetical protein XF_2169 [Xylella fastidiosa 9a5c] Length = 698 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 99/319 (31%), Gaps = 30/319 (9%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA---------------LA 132 L + A A++ + QQ+ H L LA Sbjct: 28 LARAWCASAPGEAQ-AQRWLAAALQQYGEHKAALTASEAALALAPERPELHLQHGLLLLA 86 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A L ++ + + G L+ A++ + A I D P + Sbjct: 87 QHDLSGADAALSRSTRLDPNQFNTYVMQAHLAIARGALDEAEQLSRTATRIISDHPQLLA 146 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + +A+T L+Q + E +L + KG + + Sbjct: 147 VNATIALRRGQVDQALTMLSQAVELLPE----EPAVLFSLGFAYLQKGHIAFAERAFQRV 202 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-----HLLSENT 307 ++L + I A+ Q + A ILE+ P + ++ LL+ + Sbjct: 203 IELNPHVIPVRALIAQLAQRQGRLDDALRILEEA-LSLPEGDTPALHRLTGEFELLAGHP 261 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 L ++ E +L + ++ D A A+ I PR L A++ Sbjct: 262 DRALTHLRQVLATWPEDPRTLEALLTAWKQLDMDDDARITLDAALDIKPRNHDLWL-ARL 320 Query: 368 EQANSHNTD---KILYWTQ 383 A + + I W Sbjct: 321 AVAPVGSDEARIVIERWLS 339 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 99/296 (33%), Gaps = 32/296 (10%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ + A M S E V L + A + ++++ Sbjct: 151 IALRRGQVDQALTMLSQAV--ELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVIELNP- 207 Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITF 210 V +L + + R G L+ A R +AL + D P + + +LA RA+T Sbjct: 208 HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELLAGHPDRALTH 267 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L Q E R LL A + D D + A++ + A+ Sbjct: 268 LRQVLATWPEDPRTLEALLTAWKQLDMDD-DARITLDAALDIKPRNHDL-----WLARLA 321 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESL 328 ++ +A +++E+ + + E+ L ++ + + E+ Sbjct: 322 VAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQNNPEAA 364 Query: 329 VIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++ +A+E G + ++ P + L IE H + W Sbjct: 365 ETVARQIVAIEPGRLSGEQRIVEALLQRDPPTAVACLQQLIESVPEHERTILRPWL 420 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 69/235 (29%), Gaps = 11/235 (4%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ A A +P + E A+T A E Sbjct: 14 IDALHRQAHAEALSLARAWCASAPGEAQAQRWLAAALQQYGEHKAALTASEAALALAPER 73 Query: 222 -NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + L+ + + D S S +L N + A I++ +AE Sbjct: 74 PELHLQHGLLLLAQHDLSGADAALSR-----STRLDPNQFNTYVMQAHLAIARGALDEAE 128 Query: 281 VILEKIWK-VNPHPEIAN--IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + + ++ HP++ L L + E+ E L + L+ Sbjct: 129 QLSRTATRIISDHPQLLAVNATIALRRGQVDQALTMLSQAVELLPEEPAVLFSLGFAYLQ 188 Query: 338 MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G I A +++ P + L+AQ+ Q D + + AL Sbjct: 189 KGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRI-LEEALSLPEG 242 >gi|295398572|ref|ZP_06808604.1| tetratricopeptide repeat family protein [Aerococcus viridans ATCC 11563] gi|294973173|gb|EFG48968.1| tetratricopeptide repeat family protein [Aerococcus viridans ATCC 11563] Length = 434 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 52/246 (21%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL+ +A KL ++ + +Y + + G+ A + L Sbjct: 109 ALLLQADAYQMYNLPEVALVKLSEARELAPNQPVILYGIAELRFQQGEFQQALPLYERLL 168 Query: 182 DISPDAPWVTEAVVQ--------QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + E++ + ++ AI + +N + + + Sbjct: 169 ----QSEETPESLFETIEAHFAYAKAATGDFEEAIELIEATPENDRTDEQQEQLAFYYVE 224 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 EN +K + I E KL D + A+ + + A +++K VNP Sbjct: 225 TENFEKANTI--LEALYEDDKLSDGLL---AVFAQVKNAFHDHDGALEMIDKAILVNP-- 277 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV--SKIALEMGSIDQAHAKAMLA 351 E+ + ++ A ++G+ + A LA Sbjct: 278 -------------------------------YEARLYFQKAEFAQQIGNRETAREALELA 306 Query: 352 MKIAPR 357 + I P Sbjct: 307 LDIDPD 312 >gi|24666532|ref|NP_649073.1| CG6841 [Drosophila melanogaster] gi|23093178|gb|AAF49211.2| CG6841 [Drosophila melanogaster] gi|60678113|gb|AAX33563.1| LD04472p [Drosophila melanogaster] gi|220950366|gb|ACL87726.1| CG6841-PA [synthetic construct] Length = 931 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 17/240 (7%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEALLQRAVAHCPKSEILWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +LE D+ Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDE--- 683 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + E++++ + + + Q + A K P I Sbjct: 684 --ALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPT-SIPLWILSA 740 Query: 303 LSENTVGKLKRALR-LEEINKESVESLVIVSKI---ALEMGSIDQAHAKAMLAMKIAPRK 358 E G L +A LE + + V+ + L G + A A++ P Sbjct: 741 NLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPNA 800 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKAVIAQAARHIPTSVRIWIKAADLESETKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L ++ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVELENPDDARILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGN 469 >gi|83311456|ref|YP_421720.1| SPY protein [Magnetospirillum magneticum AMB-1] gi|82946297|dbj|BAE51161.1| SPY protein [Magnetospirillum magneticum AMB-1] Length = 798 Score = 45.3 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 88/270 (32%), Gaps = 19/270 (7%) Query: 96 AAHNIPLARKMHSYVSQQ---HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 AA +P + + + + H L ++ Q +++ A + L + + Sbjct: 82 AAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQ-----GRFDEAISHFQEGLALASQ 136 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A +L G L+ A KA +++P + A W+ A+ Sbjct: 137 DVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWG 196 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + RA + +A + G + +++L + ++L Sbjct: 197 RALALEPNHAEVRADMGVALAKL----GRQEEAAECFRRAMELDPGNPAHGYNLGRALQD 252 Query: 273 QNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 + A I K+ V P H I+ L + R+ E++ + + Sbjct: 253 LGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKL--GQPDQAVASYDRVLELDPANGPA 310 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + K E G ++ A A+++ P Sbjct: 311 WLNRGKALYEAGRVEDALDSFRSALRLMPD 340 >gi|332993171|gb|AEF03226.1| tetratricopeptide repeat protein [Alteromonas sp. SN2] Length = 389 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 15/185 (8%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASY 246 + Y KEW RAI + + + + A ++ D + Sbjct: 143 AQTQLFSIYQTTKEWDRAIELAERMVECHGDNDDVCERLAHFYCEHAVAKLKDDDQGTAL 202 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYT 300 +++ ++++ + + + Q + A ++ W P + Sbjct: 203 SLLQKAVNADEHAVRPWLMLGQLALQQQRYSDARAYFVQVAERDINWFSEAVPSL----- 257 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 ++E T A LE +E S + + + L+ G QA + ++ P Sbjct: 258 EKIAEETGDWDSFAESLEAHWQECATSYLAMVDVLLKKGDTTQAADYLLEQLRKRPTMRG 317 Query: 361 F-LLL 364 F L+ Sbjct: 318 FKTLM 322 >gi|327190097|gb|EGE57209.1| hypothetical protein RHECNPAF_46003 [Rhizobium etli CNPAF512] Length = 354 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 29/231 (12%), Positives = 65/231 (28%), Gaps = 18/231 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149 G++ AA + A+ SY+ + + + + + A + Sbjct: 126 GVILKAAGDKTAAQ--ASYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCR 183 Query: 150 PA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P + L+ E GD A + +AL + P + A Sbjct: 184 PDHVDALLRLAGLFDE---WGDQFEAHHHFREALRLRPGFAEAHNNFGVFLERNGDAQAA 240 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + Q + ++ A ++ + D+ A+ +L A Sbjct: 241 ESHYRQALQLRSDY----AEAHYNYAM-LLEGRDVEAAESHYRAALSSLPMYAEAHNNLG 295 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313 L + +A ++ P + +A + + E + R Sbjct: 296 VLLHEKGALTEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQADRYAR 346 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 71/220 (32%), Gaps = 17/220 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD +AQ A+ + P P A Q K + Sbjct: 130 KAAGDKTAAQASYLDAIRLWPQYPEAHYNFAILLEETGRPDEAAAHYRQALKCRPD--HV 187 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+L +A + + GD ++H E+L+L A L + AE Sbjct: 188 DALLRLAGLFD--EWGDQFEAHHHFREALRLRPGFAEAHNNFGVFLERNGDAQAAESHYR 245 Query: 285 KIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + + H A + RA L + E+ + + E G Sbjct: 246 QALQLRSDYAEAHYNYAML-LEGRDVEAAESHYRA-ALSSL-PMYAEAHNNLGVLLHEKG 302 Query: 340 SIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHN 374 ++ +A + + A+++ P + + LLLA + + + Sbjct: 303 ALTEARSHYLTAIRLRPDDPQTYRNLALLLAAMGEEEQAD 342 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 58/184 (31%), Gaps = 12/184 (6%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 KAL++ D P + A + + A + ++ ++ Sbjct: 109 EKALELRADYPEAHNNLGVILKAAGDKTAAQASYLDAIRLWPQYPE----AHYNFAILLE 164 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292 + G + ++LK + + A + A + +A + ++ P H Sbjct: 165 ETGRPDEAAAHYRQALKCRPDHVDALLRLAGLFDEWGDQFEAHHHFREALRLRPGFAEAH 224 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++ + + + ++ + E+ + + LE ++ A + A+ Sbjct: 225 NNFG-VFLE-RNGDAQAAESHYRQALQLRSDYAEAHYNYAML-LEGRDVEAAESHYRAAL 281 Query: 353 KIAP 356 P Sbjct: 282 SSLP 285 >gi|322421635|ref|YP_004200858.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320128022|gb|ADW15582.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 406 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 6/195 (3%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL +G + A + + YL LA+++Y+ A + Sbjct: 32 ALSSGATYYQKKDYSRASSEFKRAISLDPTNAQSYNYL--ANAYLAQKKYDDAIKTYRNS 89 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L + T++ +L + N A++ A ++P + Q Y+ ++ Sbjct: 90 LTLDPTQDSVHTNLGNIYLQQKKYNLAEKEFKAAAKLNPTDTLAPYTLGQLYLQTGRYAE 149 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A T + K A + +G + +++K+ A Sbjct: 150 AETQFKKVSKMAPTDPNP----YYSLGATYNKEGKYAEAVKQLTQAIKIRPKMEAAHFEL 205 Query: 267 AKSLISQNKKRKAEV 281 + + A+ Sbjct: 206 GVAYAALGDSANAQA 220 >gi|149941651|dbj|BAF64847.1| Cdc27B [Nicotiana benthamiana] Length = 750 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 10/208 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNR 225 D +A + +A+ ++P + +YV +++ I + +A+ +N Sbjct: 537 QKDHETALKNFQRAVQLNPRFAYGHTLCGHEYVALEDFENGIKSYQSALRVDARHYNAWY 596 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +I E + + H +L++ +S + +L + K +A ++E Sbjct: 597 GLGMIYLRQEKFEFSE-----HHFRMALRINPHSSVIMSYLGTALHALKKNEEALEVMEL 651 Query: 286 IW---KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K NP P + E+ L L+E ++ +I D Sbjct: 652 AIIADKKNPLPMYQKANILVSMESFNAALGVLEELKEHAPRESSVYALMGRIYKRRNMYD 711 Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369 +A +A+ + P + + A IE+ Sbjct: 712 KAMLHFGVALDLKPSATDVATIKAAIEK 739 >gi|124023613|ref|YP_001017920.1| hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT 9303] gi|123963899|gb|ABM78655.1| Hypothetical protein P9303_19131 [Prochlorococcus marinus str. MIT 9303] Length = 936 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 11/229 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 N A ++ +Q+ T A ++ R G A + K L++ PD P Sbjct: 285 GDNNQAIGAFQIAIQLDETFIAAWINIGTALKREGRNQEALQATQKVLELKPDNPDALMN 344 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Y + A+ + + + L D + + ++SL Sbjct: 345 LGGIYQDLGKLDLALASTLKSLELKPDNPTAHMNL----GGIYKDLAKLDLALASTLKSL 400 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTV 308 +L ++ A I K A K ++ P +P+ + IY L E Sbjct: 401 ELKSDNPNALINLGGIYKDLAKLDLALASTLKSLELKPNNPDALMNLGGIYQDL-GELDP 459 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L E+ ++ ++L+ + I ++ +D A A + ++++ P Sbjct: 460 ALASTLKSL-ELKPDNPDALMNLGGIYQDLAKLDLALASTLKSLELNPD 507 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 91/261 (34%), Gaps = 42/261 (16%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + + +Q A +G+L+ A+ +AT+AL I+ +AP V E Sbjct: 116 GNHQEAIDLFKRAIQADPKLIQAYIGAAASHLALGNLDQAESFATQALKINANAPEVNEI 175 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + +AI ++ + + L+ L A+ ++ Sbjct: 176 LGIVFQNKQNPDQAIEHYQKELNINPQARNS----LLNSGLLLLQNRQPTAALESLAKAS 231 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAE-------------VIL----------------- 283 + + S+ A++ + ++A ++ Sbjct: 232 AIAPSEQ-CSLLLAQTHQKLGQLKEAIIEYQKLNINQSNNKLIPFNLGLCLFEIGDNNQA 290 Query: 284 EKIWKVNPHPE--IANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +++ + + ++ L+ ++ E+ ++ ++L+ + I Sbjct: 291 IGAFQIAIQLDETFIAAWINIGTALKREGRNQEALQATQKVLELKPDNPDALMNLGGIYQ 350 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 ++G +D A A + ++++ P Sbjct: 351 DLGKLDLALASTLKSLELKPD 371 Score = 37.2 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 7/205 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G AQ+ KA + P + + + ++ A+ + + E N Sbjct: 45 LALGQFEKAQQSLKKAHQLDKTDPEIAKDIGNTFLNLGNQENALQWYEKAL----EINNK 100 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + G+ + +++ I A I AA S ++ +AE Sbjct: 101 YAPAFNNIANLKRQIGNHQEAIDLFKRAIQADPKLIQAYIGAAASHLALGNLDQAESFAT 160 Query: 285 KIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + K+N PE+ I + +N ++ + IN ++ SL+ + L+ Sbjct: 161 QALKINANAPEVNEILGIVFQNKQNPDQAIEHYQKELNINPQARNSLLNSGLLLLQNRQP 220 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQ 366 A A IAP ++ LLLAQ Sbjct: 221 TAALESLAKASAIAPSEQCSLLLAQ 245 >gi|323977086|gb|EGB72173.1| TPR repeat-containing protein [Escherichia coli TW10509] Length = 389 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCEIALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|330994193|ref|ZP_08318121.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp. SXCC-1] gi|329758660|gb|EGG75176.1| Cellulose synthase 2 operon protein C [Gluconacetobacter sp. SXCC-1] Length = 1268 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 91/277 (32%), Gaps = 23/277 (8%) Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKAL 181 L +I A Y+ A L ++ + T A+ + + R G + A+R + L Sbjct: 388 LVARIIQAINSGHYDAAQSDLALLGRRGNTITLQALQGML--ARRQGHMEEAERLYREIL 445 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +P + + + A + + + R+ + ++ + D Sbjct: 446 RRAPGNADALFNLGGILIETGREAEAQDIIARLAHIRPDLARHLEVAGLSARSDRTRNND 505 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE---IAN 297 S ++ + + A++L +A+ I++ + P+ A Sbjct: 506 EKLSL--LNRAMAMAPTDPWIRLKLARALDEAGNHAQAQAIMDGVTSGRAVTPDDLQAAI 563 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +Y + + RA +L +ES ++++A I+ + PR Sbjct: 564 LYAMGRHD-----MARAEQLLARLPPGIESP-GMARVA---EQIELVRRIQE--LNRVPR 612 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQ-SALHAMPDPL 393 LL+A ++ + + HA D Sbjct: 613 APNALLVALADRPDPTGERGMRIANALLDRHAPQDAQ 649 >gi|326911667|ref|XP_003202178.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR repeat-containing protein 3-like [Meleagris gallopavo] Length = 937 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 76/234 (32%), Gaps = 27/234 (11%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195 A E L++ +T Y+L + D A + +AL+++P A++ Sbjct: 600 KAKEAYLRALELDSTNADLWYNLAIVYIELKDPTEALKNFNQALELNPMHKLALFNSALL 659 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q + Q+ N + A + D + +++KL Sbjct: 660 MQESGNAQ---LRPEAKQRLLNYVKEEPQDANGYFNLGMLAMDDKKDTEAEAWMKKAIKL 716 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH------LLSE---- 305 N A A K+ A ILE ++ Y L + Sbjct: 717 QPNFRSALFNLALLYSQTAKELMALPILE---------DLLKYYPDHTKGLILKGDILMN 767 Query: 306 ---NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + VG K ++ E++ +V+ + + E + +A + + +AP Sbjct: 768 QKKDIVGAKKCFEKILELDPNNVQGKHNLCVVYFEERDLIKAEKCLVETLALAP 821 >gi|297834606|ref|XP_002885185.1| HCF107 [Arabidopsis lyrata subsp. lyrata] gi|297331025|gb|EFH61444.1| HCF107 [Arabidopsis lyrata subsp. lyrata] Length = 652 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 18/267 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 NI AR + + + NEY+ LLE + A +Y A + + Sbjct: 285 GNISKARNLLAKGLK-FCGRNEYIYQTLALLEAKAA----RYEQARYLFKQATICNSKSC 339 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + + + +A++ KA+ SP + R L Sbjct: 340 ASWLAWAQLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLL--- 396 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K N +LL + L + + ++ I + Sbjct: 397 -KIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRRASEVDPRHQPVWIAWGWMEWKEG 455 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESL 328 A + + ++ + E A E + G L A RL IN +S + Sbjct: 456 NTTTARELYLRALSIDANTESAARCLQAWGVLEQSAGNLSAARRLFRSSLNINSQSYVTW 515 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +++ + G ++A L + Sbjct: 516 MTWAQLEEDQGDSERAEEIRNLYFQQR 542 >gi|262304991|gb|ACY45088.1| acetylglucosaminyl-transferase [Eurypauropus spinosus] Length = 290 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVTEAEECYNTALCLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ P A+ Sbjct: 66 EQGYTEEATRLYMKALEVFPEFAAAHSNLASVLQQQGKLNEALQHYKDAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIESYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 58/216 (26%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A E L + T ++ +L G A R KAL++ P+ Sbjct: 27 ANALKEKGQVTEAEECYNTALCLCPTHADSLNNLANIKREQGYTEEATRLYMKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + A + D+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALQHYKDAIRIQPTF----ADAYSNMGNTLKEMQDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIESYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + +LK+ RL ++ Sbjct: 201 QIVCDWTDYDNRLKKLLSIVADQLEKNRLPSVHPHH 236 >gi|254804584|ref|YP_003082805.1| IgA-specific serine endopeptidase [Neisseria meningitidis alpha14] gi|254668126|emb|CBA04715.1| IgA-specific serine endopeptidase [Neisseria meningitidis alpha14] Length = 1832 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 83/266 (31%), Gaps = 31/266 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--- 153 A+ A++ + Q E E + A +Q A + + Sbjct: 1023 ANQAEEAKRQQAKAEQVKRQQAEA-----ERKSAELAKQKAEAEREARELATRQKAEQER 1077 Query: 154 ---EFAVYSLYFESCRIGDLNSAQR--YATK---ALDISPD--APWVTEAVVQQYVLAKE 203 E A E R SA++ A + AL + A + ++ Sbjct: 1078 SSAELARRH---EKEREAAELSAKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEK 1134 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD--AIESLK-LCDNSI 260 A L+ K++ +E R A R A D +A+ D + + N++ Sbjct: 1135 EREA-AELSAKQRVGEEERRQTAQSQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNV 1193 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 + A+ Q ++RKA +L K + E A ++A L Sbjct: 1194 EIAQAQAELARRQQEERKAAELLAKQ-RAEAERE-AQALAARRKAEAEEAKRQAAELAHR 1251 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA 346 E+ +++A + +A Sbjct: 1252 Q----EAERKAAELAHRQEAERKAAE 1273 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 70/217 (32%), Gaps = 37/217 (17%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R ++K +A ++A A + ++ + E Q A R++ Sbjct: 1083 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1133 Query: 138 IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190 E E+ + R+ A + R + Q Y A P V Sbjct: 1134 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1188 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD-- 248 + V+ ++A L ++++ R A LL + E + +A+ Sbjct: 1189 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1237 Query: 249 AIESLKLCDNSI---MASICAAKSLISQNKKRKAEVI 282 A E+ + A AA+ Q +RKA + Sbjct: 1238 AEEAKRQAAELAHRQEAERKAAELAHRQEAERKAAEL 1274 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 12/230 (5%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E + + ++ A A + E +Q + S + ++K++ A E + Sbjct: 1037 EQVKRQQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEKEREAAELS 1096 Query: 223 RNRAILLI--ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + + A++L K + + A E + + A+ +AK + + ++R+ Sbjct: 1097 AKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQRVGEEERRQTA 1156 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + K P Y + + R + + +VE + ++ L Sbjct: 1157 QSQPQRRKRRAAP---QDYMAASQDRPKRRGHR-----SVQQNNVE--IAQAQAELARRQ 1206 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ A +LA + A + LA +A + + A Sbjct: 1207 QEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAER 1256 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 15/120 (12%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ LL Sbjct: 1168 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA---------AELLAK 1218 Query: 128 QIALAERQYN--IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS 184 Q A AER+ A K E E A E+ R + ++ A KA ++S Sbjct: 1219 QRAEAEREAQALAARRKAEAEEAKRQAAELAHR---QEAERKAAELAHRQEAERKAAELS 1275 >gi|119505471|ref|ZP_01627544.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium HTCC2080] gi|119458749|gb|EAW39851.1| hypothetical protein MGP2080_08494 [marine gamma proteobacterium HTCC2080] Length = 396 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 15/164 (9%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI----LEKIWK 288 ++E D+ +Y ++E+L+ + A Q KAE + +E + Sbjct: 217 AVEALMANDLNRAYWYSMEALRYSPGNSSTINMLAILNRRQGDTEKAEQLYVYGIEHAEE 276 Query: 289 -----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 N H + N+ +E+ V KR L++ + + +++ A E G Q Sbjct: 277 KLTLLKNYHNLLTNL---GRTEDAVSIEKRLQTLDDPSPFHW---IQIARSAYESGEYQQ 330 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 A A+ +AP L + ++A+ Sbjct: 331 AINYFNKAISLAPYLHEAQLGIAQSLYETGELQGAKKALEAAIE 374 >gi|255072419|ref|XP_002499884.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299] gi|226515146|gb|ACO61142.1| glycosyltransferase family 41 protein [Micromonas sp. RCC299] Length = 864 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 16/184 (8%) Query: 86 KALYTGLMSI----------AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 AL G +SI A+ ++ LA + + E + L Q + Sbjct: 224 HALGRGNLSIALGDRATAIKASGDVALAVRTYERALTLDPNSAEAMYNLGVAQA--EIGE 281 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 + A E L++ A +L ++ A +A+ I+P + Sbjct: 282 LDRATIAYESTLRLRPHCAEAWNNLGVLHRERNNVERAVECYRRAVAINPSFAQPLNNLG 341 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Y + + A+ L + A + A+ + D GD+ + E + Sbjct: 342 VVYTMQGQARMALEALQRAVAAAPTY----AVAHNNLGVLLRDTGDVPEALEAYGECARH 397 Query: 256 CDNS 259 + Sbjct: 398 SPDH 401 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 10/236 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A A Y+L +G + A +A++++P+ Sbjct: 137 GSPAQAVAHYREAAATDPRYSPAFYNLGVVMSELGRHDEALECYARAIEVNPNHAEAHCN 196 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA---RSLENADKGDMIASYHDAI 250 V + + AI + R L IA R+ GD+ + Sbjct: 197 VGVIKKYRGDVTGAIEAYERCLAVNPNHALGRGNLSIALGDRATAIKASGDVALAVRTYE 256 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSEN 306 +L L NS A + + +A + E ++ PH A + +L N Sbjct: 257 RALTLDPNSAEAMYNLGVAQAEIGELDRATIAYESTLRLRPH--CAEAWNNLGVLHRERN 314 Query: 307 TVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 V + ++ R IN + L + + G A A+ AP + Sbjct: 315 NVERAVECYRRAVAINPSFAQPLNNLGVVYTMQGQARMALEALQRAVAAAPTYAVA 370 >gi|149941649|dbj|BAF64846.1| Cdc27B [Nicotiana tabacum] Length = 751 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 10/208 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNR 225 D +A + +A+ ++P + +YV +++ I + +A+ +N Sbjct: 538 QKDHETALKNFQRAVQLNPRFAYGHTLCGHEYVALEDFENGIKSYQSALRVDARHYNAWY 597 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +I E + + H +L++ +S + +L + K +A ++E Sbjct: 598 GLGMIYLRQEKFEFSE-----HHFRMALRINPHSSVIMSYLGTALHALKKNEEALEVMEL 652 Query: 286 IW---KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K NP P + E+ L L+E ++ +I D Sbjct: 653 AIIADKKNPLPMYQKANILVSMESFNAALGVLEELKEHAPRESSVYALMGRIYKRRNMYD 712 Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369 +A +A+ + P + + A IE+ Sbjct: 713 KAMLHFGVALDLKPSATDVATIKAAIEK 740 >gi|282897745|ref|ZP_06305744.1| TPR repeat protein [Raphidiopsis brookii D9] gi|281197424|gb|EFA72321.1| TPR repeat protein [Raphidiopsis brookii D9] Length = 267 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 14/145 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------ 176 +L Q A + +L+ ++ + +A ++ Sbjct: 113 KVLLAQATQQIGNRQEAIQMYRSILRTQPGNIQSLQGIVKLKLDQKRPEAAIQFLKETIS 172 Query: 177 -ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A K+ + P + + ++ Y K +AI+ + K + R ++A+ Sbjct: 173 NAEKSNSVQPGSFDIIAIQLLLGSVYSSQKNTDQAISLYQEVMKQYPQDFRP----VLAK 228 Query: 233 SLENADKGDMIASYHDAIESLKLCD 257 ++ ++G + + +L L Sbjct: 229 AILLKEQGKINEAKPLFDSALTLAP 253 >gi|196232950|ref|ZP_03131799.1| Tetratricopeptide TPR_4 protein [Chthoniobacter flavus Ellin428] gi|196222928|gb|EDY17449.1| Tetratricopeptide TPR_4 protein [Chthoniobacter flavus Ellin428] Length = 694 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 70/220 (31%), Gaps = 7/220 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R GD A+ + + + P + A+ Y E + L + E+ Sbjct: 423 IRAGDWVDAETFCARTIADGGATPRILSALAGIYGQRGELQKQEQILRKMIVQFPEYAPA 482 Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R I L + + + + A++ A + + + A++ A+ +A Sbjct: 483 RLNLGICLSRQGKKAEAEALLGATHQQADQVARQYPRTWTAALQLAQLRTDAGHPDEALG 542 Query: 282 ILEKIWKVNP-HPEIANIYTHLLSEN--TVGKLKRALRLEEINKESVESLVIVSKIALEM 338 IL + P E+ +L E L + +S V + + Sbjct: 543 ILREARGRFPDTWELIKGEAEMLRETSGPATALPLVEDFAAKHWWHYDSHVTLGALRFAA 602 Query: 339 GSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDK 377 G D A A ++ +A+IE H+ + Sbjct: 603 GQPDAAIRALTAASRLDIYDGRALAGVAEIENTVGHSDEA 642 >gi|195376509|ref|XP_002047039.1| GJ12147 [Drosophila virilis] gi|194154197|gb|EDW69381.1| GJ12147 [Drosophila virilis] Length = 1187 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 166 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERA 223 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 224 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 282 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 283 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 337 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 338 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 397 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + A I K + + A+I Sbjct: 398 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 452 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 312 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 371 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D + Sbjct: 372 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 431 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A+ LE Sbjct: 432 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKLAKDTLESA--------------- 476 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A + + + ES ++++ M S D A +K P Sbjct: 477 ---------LKHASSEMDKDVKYYESIQVTMKYNLARLNEAMSSFDVADKLYKEILKEHP 527 >gi|190344528|gb|EDK36216.2| hypothetical protein PGUG_00314 [Meyerozyma guilliermondii ATCC 6260] Length = 659 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 81/257 (31%), Gaps = 22/257 (8%) Query: 135 QYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + + + I TR ++ L+ + DL A + ++ + Sbjct: 392 NHRQSEHYFVQLRSIDRTRLEDMEYYSTLLWHLHKKV----DLT---YLADELHEVDAKS 444 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P V + L ++ AI+ N+ + +R + E + + Sbjct: 445 PITWCVVGNLFSLNRDTDDAISCFNKAIR----ADRKFTYAYTLKGHEYFGNDNYEMALE 500 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 + SL + A I+ ++A+ K +NP I ++ E Sbjct: 501 NFRTSLLIDPRHYNALYGIGMVYINLGDFQRADYHFRKAVSINPINIILICCMGMVLEKV 560 Query: 308 VGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 + L++ ++ + + +++ M QA A + +AP + L Sbjct: 561 GKRHLALRQYELATKLQPNNPLPIFKKAQLLFTMQQYSQALAAFEILRDLAPDEASVRFL 620 Query: 364 LAQIEQANSHNTDKILY 380 L Q+ + + Sbjct: 621 LGQLYNIQNEKAKAVRE 637 >gi|153872213|ref|ZP_02001170.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152071321|gb|EDN68830.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 721 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 22/192 (11%) Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A N A++ + Q R+ + L + R G++ +Q Y + L + P Sbjct: 533 AFQGGDDNTAYQAYQRALQQDERNRDALL-GLGALAMRSGNMRLSQYYYQRVLKLYPQDT 591 Query: 189 WVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A+ + + + K E A + A++G + Sbjct: 592 YAVVALGNTLDKRSPES---------ESQLKLLLEQTPQSAHIHFNLGTFYANQGQWAKA 642 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++ + + + A SL N+ A +K ++ H ++S Sbjct: 643 QQAYFDAYRYDNTQADYAYNLAISLDHLNQSSAALTYYQKALQLAQH--------QVVSF 694 Query: 306 NTVGKLKRALRL 317 N KR L Sbjct: 695 NPATVQKRVQTL 706 >gi|187479100|ref|YP_787125.1| cellulose synthase protein C [Bordetella avium 197N] gi|115423687|emb|CAJ50237.1| cellulose synthase protein C [Bordetella avium 197N] Length = 1323 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 5/125 (4%) Query: 163 ESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E+ R GDL +A L PD A+ + Y A + +A+ + N + Sbjct: 690 EAMRQRGDLVAAYDMLQPVLKRRPDDALAQGALARMYAAAGDRDKAVEIYRKLLANDPD- 748 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L +A + +A+ D + +L L AA+ ++ +A Sbjct: 749 ---NATLQLAFAGISAEMNDWRTAEKAVDRALALAPKDPDVLAGAARLYRARGYTGRAAE 805 Query: 282 ILEKI 286 + + Sbjct: 806 LYQAA 810 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 92/316 (29%), Gaps = 37/316 (11%) Query: 69 PAMLFHMLHKRNYDKGYKALYTG-LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 PA +G++AL L++ + + + LV + + Sbjct: 262 PAAAPAWRQDARLARGFEALKQSDLLAA---ESAFQETLRAKPNDPDALGGMGLVRMQQG 318 Query: 128 QIALAERQYNIAHEKLEM----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + AE A + + R +++ + + G+ A++ +A+ + Sbjct: 319 RATEAEDFLKCAAAAPNAGRNWSRALSSARYWSLIDQAESARKRGETAEARKLLEQAIRL 378 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 A+ + + A + + A + ++N A ++ + A G Sbjct: 379 DGSQASAFNAMGRVFSSAGDTANAEKT----YRYVLARHKNDAEAIVGLADVLAQDG--- 431 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 A E+L+L D+ A + A + Sbjct: 432 ----RAEEALRLIDSLPPEQAARAGNAARLRATVAASRA-------------RVVARDGD 474 Query: 304 SENTVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + L+RA + N + E ++++ L G QA + P L Sbjct: 475 AAAAREVLERARAADPANPWLNYE----LARLMLREGKAGQAQRLVDDFERAHPDTPDAL 530 Query: 363 LLAQIEQANSHNTDKI 378 + + + Sbjct: 531 FASALLASERSEWGAA 546 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 8/161 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TRE 154 ++ A M V ++ ++ L ++ A + A E +L T + Sbjct: 696 GDLVAAYDMLQPVLKRR--PDDALAQGALARMYAAAGDRDKAVEIYRKLLANDPDNATLQ 753 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A + E + D +A++ +AL ++P P V + Y RA Sbjct: 754 LAFAGISAE---MNDWRTAEKAVDRALALAPKDPDVLAGAARLYRARGYTGRAAELYQAA 810 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + A N G A + L Sbjct: 811 IALQDQRTGLLAQAPAGAVQSNPFAGLPGQRAESARVAQVL 851 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 73/248 (29%), Gaps = 33/248 (13%) Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 + + P + + + + + + ARK+ + Sbjct: 326 FLKCAAAAPNAGRNWSRALSSARYWSLIDQAESARKRGETAEARKLLEQAIRLDGSQASA 385 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + ++ + A + +L A+ L D+ + A +A Sbjct: 386 FNAM--GRVFSSAGDTANAEKTYRYVLARHKNDAEAIVGLA-------DVLAQDGRAEEA 436 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L + P ++ A R RA + +R+ A G Sbjct: 437 LRLIDSLP-----------------------PEQAARAGNAARLRATVAASRARVVARDG 473 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 D A+ + + + A+ ++ + K +A+ +++ + +P P+ Sbjct: 474 DAAAAREVLERARAADPANPWLNYELARLMLREGKAGQAQRLVDDFERAHPDTPDALFAS 533 Query: 300 THLLSENT 307 L SE + Sbjct: 534 ALLASERS 541 Score = 36.5 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 51/167 (30%), Gaps = 11/167 (6%) Query: 99 NIPLARKMHSYVSQQHTFHN----EYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPA 151 + +A + Q+ + LV L ++ A A RQ +M+ L+ Sbjct: 654 DARVADVLRQVQKQKLDPDQHRSFQDLVSLYTIRQAEAMRQRGDLVAAYDMLQPVLKRRP 713 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A +L GD + A K L PD + A +W A + Sbjct: 714 DDALAQGALARMYAAAGDRDKAVEIYRKLLANDPDNATLQLAFAGISAEMNDWRTAEKAV 773 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 ++ A +L + +G + ++ L D Sbjct: 774 DRALALAP----KDPDVLAGAARLYRARGYTGRAAELYQAAIALQDQ 816 >gi|53728749|ref|ZP_00135485.2| COG2956: Predicted N-acetylglucosaminyl transferase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208217|ref|YP_001053442.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae L20] gi|126097009|gb|ABN73837.1| hypothetical protein APL_0737 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 398 Score = 45.3 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 91 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIEKIKACY 266 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQYPSMITF 325 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348 >gi|312958848|ref|ZP_07773367.1| TPR domain protein [Pseudomonas fluorescens WH6] gi|311286618|gb|EFQ65180.1| TPR domain protein [Pseudomonas fluorescens WH6] Length = 574 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 54/133 (40%), Gaps = 8/133 (6%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ ++L + D + +E + + + A+ L + N+ ++A +LEK Sbjct: 188 LIFGKAL-LLQQDDEAEAALKLLEQNPPEEGEVAPILLRARLLQNLNRGKEAIPLLEKSI 246 Query: 288 KVNPHPE---IANIYTH-LLSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSID 342 K +P+ + Y L+ ++ + K + L + + E ++ + LE + D Sbjct: 247 KK--YPDDKRLRLTYARMLVEQDRMEDAKVQFANLVQQYPDDDELRYSLALVCLEAKAWD 304 Query: 343 QAHAKAMLAMKIA 355 +A ++ Sbjct: 305 EAKGYLQELIERE 317 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 96/288 (33%), Gaps = 11/288 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + K+ Q ++ L Y L + L + ++ A L+ +++ + + A Sbjct: 267 DRMEDAKVQFANLVQQYPDDDELRYSL-ALVCLEAKAWDEAKGYLQELIERESHVDSAHL 325 Query: 159 SLYFESCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + D +A YA + +A + A L + Sbjct: 326 NLGRIAEERNDPQAALLEYAQVGPGNDYLPAQLRQA--DILMSNGRTDEAEKRLAAARDA 383 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ L + ++ + ++ ++L + + A +N Sbjct: 384 EPDYAIQ---LYLIQAETLSANNQGERAWKLLQQALLQFPDDLNLLYTRAMQAEKRNDLA 440 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSK 333 + E L I K +P +A + + A L ++N E L + Sbjct: 441 QMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRYDEAKVLIEQAHKLNPEDPAVLDSLGW 500 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + +G++D+A A++ P +E+ L ++ AN + W Sbjct: 501 VNYRLGNLDEAERLLRQALERFPDQEVAAHLGEVLWANGKQREARQIW 548 >gi|307544992|ref|YP_003897471.1| hypothetical protein HELO_2402 [Halomonas elongata DSM 2581] gi|307217016|emb|CBV42286.1| hypothetical protein HELO_2402 [Halomonas elongata DSM 2581] Length = 790 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 23/200 (11%), Positives = 54/200 (27%), Gaps = 25/200 (12%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ SA + A +A+ + R + ++ R Sbjct: 17 GEPKSALQQAQRAM------------------AEGDLERVEALVEHAVQSGDPHPGERR- 57 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI- 286 L + + + A+E+ + + K R+A + + Sbjct: 58 LWVRIAFRQGHIDSALERSKKALEAQPNDPQLR---ALDVRIQAAAGKPRRALHRVNQAI 114 Query: 287 --WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 W +P + + T L +L + E L+ V++ G Sbjct: 115 PRWPNSPRLRLVKLQLLRDLGRTRPALHVLRQLRRRWPRNPEVLIAVAQFYRAHGRFRAT 174 Query: 345 HAKAMLAMKIAPRKEIFLLL 364 ++ P+ ++ Sbjct: 175 RTVLDHLLEHHPKHRQARVM 194 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 12/177 (6%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQ 174 E L + Q A+AE +E +Q P R V + R G ++SA Sbjct: 18 EPKSALQQAQRAMAEGDLERVEALVEHAVQSGDPHPGERRLWVR----IAFRQGHIDSAL 73 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + KAL+ P+ P + V+ A + RA+ +NQ R R + L Sbjct: 74 ERSKKALEAQPNDPQLRALDVRIQAAAGKPRRALHRVNQAIPRWPNSPRLRLVKLQL--- 130 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D G + H + + + I A+ + + R +L+ + + +P Sbjct: 131 -LRDLGRTRPALHVLRQLRRRWPRNPEVLIAVAQFYRAHGRFRATRTVLDHLLEHHP 186 >gi|251772286|gb|EES52856.1| protein of unknown function [Leptospirillum ferrodiazotrophum] Length = 555 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 101/287 (35%), Gaps = 38/287 (13%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + + A + +L+ + + + + + A L+ + + + Sbjct: 192 KSSQALKFFRKLLRKSPRNIRLLRHVARLAANVNEFGRALDTYRLLLEEEGETAELCLLM 251 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + +A + A+ F+ + A E + +L L D GD + +A+ + Sbjct: 252 AETHKMAGKPLAALPFVRRALALAPESREAQLLL----GLLQVDIGDPEKA-EEALAGID 306 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENT--- 307 + + + KA V L + + + P P E+ + T Sbjct: 307 SAPGH----YQLGDLWLRKKRPEKAAVALLRGFVIRPDPYYIPELLKLLARFEDTFTFLE 362 Query: 308 --------------VGKLKR--ALRLEEINKESVESLVI----VSKIALEMGSIDQAHAK 347 G++ R A R+E S ++ + +++ L ++A+A Sbjct: 363 TLALTRILFPDTPIPGRILRQVAERIESEKPPSDDAHRLATLGLARAFLPREDRNEAYAL 422 Query: 348 AMLAMKIAPRKEI-FLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 A+ + P E+ + +LA I++ + + L W L A +P+ Sbjct: 423 LEQAVTVDPLSEVPYWVLAMIDE-DRKDYRGALRWYDRILSASREPV 468 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 92/303 (30%), Gaps = 47/303 (15%) Query: 95 IAAHNIPLARKMHSYVSQQHTF----HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 +A ++ R+ + + V L + + A E + I Sbjct: 8 VAIGDLIRKRRYSEALDLLDRTAPERDRDSAVETLRGMALEGQGLLSQAEECYWKAVAIE 67 Query: 151 ATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 R + L R + A + L + PD P + L W A+ Sbjct: 68 KNRSALPFLLLGLLKDRTDERKKALWVLEEGLRLFPDDPDLLREAGILNGLEGRWPLALP 127 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + + + I + +++L+L D + Sbjct: 128 MILEAHRRIPS------------------SPENILAMASTVDTLELIDLFAPMA------ 163 Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVE 326 R E +LE NP +P+I + Y L E + LK +L + ++ Sbjct: 164 -------RNLENLLEA----NPENPDIQDWYGRSLERIEKSSQALKFFRKLLRKSPRNIR 212 Query: 327 SLVIVSKIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK---ILYWT 382 L V+++A + +A +L + E+ LL+A+ + + Sbjct: 213 LLRHVARLAANVNEFGRALDTYRLLLEEEGETAELCLLMAETHKMAGKPLAALPFVRRAL 272 Query: 383 QSA 385 A Sbjct: 273 ALA 275 >gi|162455529|ref|YP_001617896.1| hypothetical protein sce7247 [Sorangium cellulosum 'So ce 56'] gi|161166111|emb|CAN97416.1| hypothetical protein sce7247 [Sorangium cellulosum 'So ce 56'] Length = 1267 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 66/216 (30%), Gaps = 7/216 (3%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQY 136 R + ++ L++ ++ + E LL + ++A + Sbjct: 391 ARRSAEAAPSVRRYLLAGQLSEDRNQQRAWIERAAALAGGREDTDVLLSQARLAQTSPNW 450 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-PWVTEAVV 195 A E +L AV L G +A +AL P + + + Sbjct: 451 REAAPIYERILASDPDHVAAVLGLVDLYVEAGLKRTALATLERALARQPSSVSLLRASAA 510 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q L ++ A + + + +A + D + L+ Sbjct: 511 QLRALGRDTEAAEMEARYAALRFDDSSFLHQQVELAVARR-----DPAGAERWIERFLRS 565 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +S+ A AA++ + + +A ++ + P Sbjct: 566 EPDSVWARTVAARTYRALGQGDRALAAHQRALAMAP 601 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 69/240 (28%), Gaps = 43/240 (17%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKK 215 L + A+ A ++ + +P + + + + W + Sbjct: 372 RYLMLTGGDAEGEHRARDLARRSAEAAPSVRRYLLAGQLSEDRNQQRAWIE--------R 423 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A R +L++++ + + L + + A + + Sbjct: 424 AAALAGGREDTDVLLSQARLAQTSPNWREAAPIYERILASDPDHVAAVLGLVDLYVEAGL 483 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKI 334 KR A LE+ P ++V L+ A +L + +++ + + Sbjct: 484 KRTALATLERALARQP--------------SSVSLLRASAAQLRALGRDTEAAEMEARYA 529 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLW 394 AL H + LA+ + W + L + PD +W Sbjct: 530 ALRFDDSSFLHQQVELAVARR------------------DPAGAERWIERFLRSEPDSVW 571 >gi|91080933|ref|XP_974172.1| PREDICTED: similar to GA17918-PA [Tribolium castaneum] Length = 947 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 87/244 (35%), Gaps = 39/244 (15%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ P+ Sbjct: 602 NRTKEAQEVYERALLYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHE- 656 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL---------LIARSLENADKG 240 +A++ +L + N+ + R +L + D+ Sbjct: 657 --QALLNSAIL-------LQEFNRPELRKIARERLLKLLDKDSNNERVHFNLGMLAMDEK 707 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------ 294 ++ + H ++ L + + A L + +A L + V HP+ Sbjct: 708 NIEEAEHWFRRAVHLKADFRSSLFNLALLLADDQRPLEAAPFLNQ--LVKYHPDHVKGLI 765 Query: 295 -IANIYT-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + +IY ++ + R R+ E++ E+++ L + + +E G + +A A A Sbjct: 766 LLGDIYINNIKDLDAAENCYR--RILELDPENIQGLHNLCVVHVERGKLLEAQACLEKAH 823 Query: 353 KIAP 356 ++AP Sbjct: 824 QLAP 827 >gi|192359108|ref|YP_001981437.1| putative TPR domain-containing protein [Cellvibrio japonicus Ueda107] gi|190685273|gb|ACE82951.1| putative TPR domain protein [Cellvibrio japonicus Ueda107] Length = 383 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 23/192 (11%) Query: 208 ITFLNQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC- 265 + K + A R +E A G+ A++ + ++L L AS Sbjct: 196 LRLFRANYKQREISKDQIAAQFYSNRGMELAANGEFSAAFLNLRKALLLEPK---ASYIW 252 Query: 266 --AAKSLISQNKKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGK--LKRAL 315 Q +AE I + VNP H +A +Y + ++ K + R Sbjct: 253 SNFGSLYRRQGLLPEAEAIYLRGLNVNPSDYTIMH-NLAGLYRE-MGDDAKQKEYMSRVR 310 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANS-- 372 R N V++ L+ QA A+K ++ + L +I +A Sbjct: 311 RHRSANPYY---QYKVAQEKLDAKEYGQARLYIEKAIKQEKKEPRFYRLAIEIYEAMGDQ 367 Query: 373 HNTDKILYWTQS 384 D+ Sbjct: 368 KAADRARELLDK 379 >gi|189425157|ref|YP_001952334.1| hypothetical protein Glov_2098 [Geobacter lovleyi SZ] gi|189421416|gb|ACD95814.1| Tetratricopeptide TPR_2 repeat protein [Geobacter lovleyi SZ] Length = 566 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 76/239 (31%), Gaps = 17/239 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A +Y+ A + L+ R + L + A Y K + Sbjct: 214 MAISYEALGEYDKAIAAYKNALEDAENRAPLIQHLIQLFIQNRRYEDALTYLKKLDQMGL 273 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + Y+ +++ AI +Q + + ++ R L + + E ++ + Sbjct: 274 ATAETNRKIGLIYLELEQYDDAIKVFSQMLETDPDAHQIR--LYLGSAFEEKNELE---- 327 Query: 246 YHDAIESLKL---CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 +E K+ A A + +A +LE+ N + ++Y L Sbjct: 328 -RAVVEFHKIPADAPVYPEAVGHLAFIYKELGRGDEAVRLLEQTIAANQ--DKLDLYLSL 384 Query: 303 LS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ LK +E + + + ++G ++ + + + P Sbjct: 385 ATLHDALQHPAEGLKLLQGVEARFADDPRFQFRMGILYDKLGKRPESIERMKKVVVLNP 443 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 85/277 (30%), Gaps = 25/277 (9%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATR--- 153 N+ A + Q LLE +I L + + + + P R Sbjct: 52 GNVEQALILTRQA--QTADPVTPYPILLEAEILLKSGRVQDSLAAVDRAIKVAPDYRPSY 109 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 S+ +G A Y A+ + P +V + E+ ++T L Sbjct: 110 LLGG-SIMS---TMGKTKEAAAYLRNAVRLEPGKEDAVLHLVTTLMQLFEYEESVTVLKS 165 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K E A+ + + S ++L+L I A+I A S + Sbjct: 166 LIKVKPES----AVGNYYLAKVYSQMKLYRESIGYYQKALELRPEFIQATIDMAISYEAL 221 Query: 274 NKKRKAEVI----LEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + KA LE P H + ++ L +L+++ + E Sbjct: 222 GEYDKAIAAYKNALEDAENRAPLIQH--LIQLFIQNRRYE--DALTYLKKLDQMGLATAE 277 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + I LE+ D A ++ P L Sbjct: 278 TNRKIGLIYLELEQYDDAIKVFSQMLETDPDAHQIRL 314 >gi|13476728|ref|NP_108297.1| hypothetical protein mlr8130 [Mesorhizobium loti MAFF303099] gi|14027489|dbj|BAB53758.1| mlr8130 [Mesorhizobium loti MAFF303099] Length = 289 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 83/244 (34%), Gaps = 11/244 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + +A + E+ L+ + L DL+ A+ + +L Sbjct: 15 RAVAAFNSGNHGLAMQLCELGLKQHPDDPALCHLLAAVLFARADLSGARTHIETSLAARA 74 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D + + A+ L++ K + + + I R+ G+ +A+ Sbjct: 75 DNVPALILACKIARADGRFEAALQQLDRAAKLSSQAE-----IPIERARTFDQAGNALAA 129 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTH 301 L+ S A+ + + +AE LE+ HP ++ + Sbjct: 130 REWWTLVLQRDPKSEEAAARLGRLAWQRGASVEAEGFLERAVASGGHPSAWFDLGLVRQD 189 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + + R+ E++ ++ E+ V + + E G +D A A ++ P Sbjct: 190 MRKFGAAA--QAYRRVLEMSPDAPEAAVNLGVVLQETGDLDGAMLAYSTAYRLRPSTFGV 247 Query: 362 LLLA 365 + +A Sbjct: 248 IAMA 251 >gi|116619265|ref|YP_821421.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222427|gb|ABJ81136.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] Length = 608 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 61/254 (24%), Gaps = 44/254 (17%) Query: 130 ALAERQYNIAHEKLE-MMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A Q A + P+ T + GD AQ +A+++ P Sbjct: 46 ADDAGQRAEAIAAYSDALAADPSNTEALRARG--KDYQADGDRAKAQADFDRAIELQPAR 103 Query: 188 PWVTEAVVQQYVLAKEWSRAIT--FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + RAI L K + R+ + + Sbjct: 104 AEGYVVRAGFFAATGQPERAIHDYTLAINLK------MEHVDVYSGRAKAYTATREFDKA 157 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 D ++++L + NP P + Sbjct: 158 EEDFTQAIRLRLD-------------------------------NPEPYLGRGIARAEQR 186 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLL 364 ++ + E V + + A A+K+ P + + Sbjct: 187 KYRDAIEDFDSCIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVR 246 Query: 365 AQIEQANSHNTDKI 378 + + S + + Sbjct: 247 GAVRERLSDDAGAV 260 >gi|308050459|ref|YP_003914025.1| type IV pilus biogenesis/stability protein PilW [Ferrimonas balearica DSM 9799] gi|307632649|gb|ADN76951.1| type IV pilus biogenesis/stability protein PilW [Ferrimonas balearica DSM 9799] Length = 257 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 70/210 (33%), Gaps = 35/210 (16%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R GD+ A+ KAL +PD A+ + + +A + A NR+ Sbjct: 52 LRRGDMEQAKFNLDKALKQAPDLDEAHLALAFYFETVSDTDQA----ERAYLRALRVNRH 107 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-------ICA--------AKS 269 A + +G + ++ + I + ICA A+ Sbjct: 108 NADAANNYGVFLCREGRFKEADTWMRRAVNN-PDYIRQAQTYENLGICAREAGWNDKAQG 166 Query: 270 LISQN---KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 Q R+A +LE E+A + L R + ES + Sbjct: 167 YFEQALNYDPRRAVSLLEVA-------ELA--FAARQPAKARKYLGRYH---DGGNESAQ 214 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 SL++ ++ALE D A +L + P Sbjct: 215 SLLLGVELALEAEDTDAARRYGVLLLAKYP 244 >gi|258591099|emb|CBE67394.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 251 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 64/190 (33%), Gaps = 6/190 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G+ + A A + + V Q H + + QI + Q A + E +L Sbjct: 50 LEQGIQAHNARQYEQAVEWYHRVLAQDPGH--PVAHYNLGQIYTVQGQPAKAQWEYEAVL 107 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + A +L R A + +AL +SP P + + +A Sbjct: 108 RADPRHLDAWINLGVALYRQRKFQEAAEASRQALTLSPRHPMALFNLGVTLLEMDRPDQA 167 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 IT+L + ++ RA + + + +++ L + MA + A Sbjct: 168 ITWLTAALQE----DQKRADTHYYLGHAYLKQQRVAEARRSLEKAIALNPDLQMAHLTLA 223 Query: 268 KSLISQNKKR 277 K Q + Sbjct: 224 KLARQQGDSK 233 >gi|163856379|ref|YP_001630677.1| hypothetical protein Bpet2068 [Bordetella petrii DSM 12804] gi|163260107|emb|CAP42408.1| putative exported protein [Bordetella petrii] Length = 537 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 62/212 (29%) Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 ++ A + + + +A +LE V+ P + Y ++ +L +A Sbjct: 266 TLPEIALAGATAFEAAGEPAEAARVLEAAVPVHFTPSLVAAYARCDADQVPRRLAKAEGW 325 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + + L + + L QA ++ LL + D Sbjct: 326 LQKRPADADLLAALGMLCLNGQLWGQAERYLQRSLGFRNDSHTHALLGSLYDRLDRPADA 385 Query: 378 ILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFEWKIPTKSPEYISSENINF 437 + +W + +M P+ D ++ + P P +++ + Sbjct: 386 VRHWRLATAASMALPVLAVDQALPAAETSADPLHLDAEGEYSAYPPESGPSSVTAMYSSE 445 Query: 438 SLEMAYPADDLQSMLNNGKKNHLPSIKKVSSF 469 +L A PAD + + Sbjct: 446 TLPQAVPADYVLDPDARAADREHSAATDPEPA 477 >gi|39995514|ref|NP_951465.1| TPR domain protein [Geobacter sulfurreducens PCA] gi|39982277|gb|AAR33738.1| TPR domain protein [Geobacter sulfurreducens PCA] Length = 748 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 72/208 (34%), Gaps = 14/208 (6%) Query: 97 AHNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A + K+ + + L A + + R Sbjct: 482 AGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADL-GRIKEEVGLYANLAIREQNRV 540 Query: 155 FA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAI 208 +A + ++ ++GD ++ A + ++ P PWV + + ++ R + Sbjct: 541 YAPELYRRILHDAEQLGDPTLMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVV 600 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMIASYHDAIESLKL----CDNSIMAS 263 L+ + ++ + +SL+ + ++ D + + L+ + AS Sbjct: 601 GRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAMLLFLAELRRREMSSPLAADAS 660 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291 AA + +S+ ++ A+ IL + +P Sbjct: 661 YVAATARLSRGDRKGAKEILRAAGEASP 688 >gi|294676069|ref|YP_003576684.1| hypothetical protein [Rhodobacter capsulatus SB 1003] gi|294474889|gb|ADE84277.1| TPR repeat domain protein [Rhodobacter capsulatus SB 1003] Length = 572 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 1/169 (0%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL I ++ QY++A + A G ++A Sbjct: 300 LLIADILESQDQYDLAIAAYAEIGPDNPAFYAAELGRAQAMVSAGQSDAAIGVLEALSRS 359 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 PD P ++ + ++ A T ++ L +R++ G Sbjct: 360 HPDLPNAWSSLGDTLRREERYAEAATAYDKAIALTGTPRPADWSLWYSRAIAQERSGQWD 419 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291 + E+LKL + M S + + ++A ++EK P Sbjct: 420 KAEKGFREALKLSPDQPMVLNYLGYSYVEKRQNLKEALEMIEKAVAGRP 468 >gi|307731322|ref|YP_003908546.1| tetratricopeptide repeat-containing protein [Burkholderia sp. CCGE1003] gi|307585857|gb|ADN59255.1| Tetratricopeptide TPR_1 repeat-containing protein [Burkholderia sp. CCGE1003] Length = 602 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 73/239 (30%), Gaps = 15/239 (6%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G ++A + L + P + + A ++Q K+ Sbjct: 28 LHAHEAGRFDTADSIYREILALDPANTRALHYFGVLHYQRGQHEAAAILMSQALKH---- 83 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R A R L A G + + ++L+L N A +L +Q +A Sbjct: 84 DRQDAACWSNRGLAAAALGRLDEATICYDQALQLQPNFADARNNFGVALQAQGALNEAVE 143 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVESLVIVSKI 334 NP A + HL +GKL R L +++ S E+ Sbjct: 144 QYRLAIASNP----ALVDAHLNLGTALGKLGRFAEALACYRNALQLDPASAEAHFNAGNA 199 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 G + A A A+ + P + + + A+ P+P Sbjct: 200 HNARGEHEAAVASFERALALRPDYAEAHVNLGSAIGKRGDYAGAEAHYRRAVELKPNPT 258 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 49/163 (30%), Gaps = 5/163 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A LQ+ A ++ G+ +A +AL + PD Sbjct: 170 GRFAEALACYRNALQLDPASAEAHFNAGNAHNARGEHEAAVASFERALALRPDYAEAHVN 229 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + +++ A + + L+ +G + E+L Sbjct: 230 LGSAIGKRGDYAGAEAHYRRAVELKPNPT-----NLVCMGGALGAQGRLAEEEKFYREAL 284 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 N A A L+ Q R+ + W+ + + +A Sbjct: 285 AQDPNYADAHQNLAWLLLKQGDYRQGWAEFARRWRKSDYEALA 327 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 68/234 (29%), Gaps = 15/234 (6%) Query: 130 ALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD- 186 A +++ A +L + TR + + + G +A ++AL Sbjct: 30 AHEAGRFDTADSIYREILALDPANTRALHYFGVL--HYQRGQHEAAAILMSQALKHDRQD 87 Query: 187 -APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 A W + A +Q + + R +A +G + + Sbjct: 88 AACWSNRGL--AAAALGRLDEATICYDQALQLQPNFADARNNFGVA----LQAQGALNEA 141 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHL 302 ++ + A + +L + +A +++P A H Sbjct: 142 VEQYRLAIASNPALVDAHLNLGTALGKLGRFAEALACYRNALQLDPASAEAHFNAGNAHN 201 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + R + + E+ V + + G A A A+++ P Sbjct: 202 ARGEHEAAVASFERALALRPDYAEAHVNLGSAIGKRGDYAGAEAHYRRAVELKP 255 >gi|156741814|ref|YP_001431943.1| hypothetical protein Rcas_1834 [Roseiflexus castenholzii DSM 13941] gi|156233142|gb|ABU57925.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii DSM 13941] Length = 593 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 81/236 (34%), Gaps = 7/236 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 E + A A E+ ++ + A + + + +A T+AL + P Sbjct: 311 EAEELAASGSLGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQNAVDDFTRALALDP 370 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + +++ AI + + +LL+ R + DKG + Sbjct: 371 ENAEAYHQRARAFYRLQQYDEAIRDFTEALARDPNND----VLLMRRGVAYRDKGQYDEA 426 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THL 302 D +SL+L + A + + +A ++ + P +A + L Sbjct: 427 LADFDQSLQLNPDVSFTYYHRALLFQATGRLERARADFDRALTIAPEYRLAYVGRGGLRL 486 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + G L+ R E++ +++ ++ A+ + A A + P Sbjct: 487 EQGDARGALRDCTRAIELDATEIDAYFCRARAAIALRDYRAAVADLDTVIARDPDS 542 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 39/236 (16%) Query: 136 YNIAHEKL-EMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y+ A E + + P + + + G + A ++L ++PD + Sbjct: 389 YDEAIRDFTEALARDPNNDVLLMRRGVAY--RDKGQYDEALADFDQSLQLNPDVSFTYYH 446 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + RA ++ A E+ + + R ++GD + D ++ Sbjct: 447 RALLFQATGRLERARADFDRALTIAPEYR----LAYVGRGGLRLEQGDARGALRDCTRAI 502 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L I A C A++ I+ R A L+ + + P+ A+ Y Sbjct: 503 ELDATEIDAYFCRARAAIALRDYRAAVADLDTVIARD--PDSADAYRE------------ 548 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 + + D+A A A+++ + LA++E+ Sbjct: 549 -----------------RGRAHQALRDTDEARADYQRAIELYRLQGRDKDLAEVEK 587 >gi|119386185|ref|YP_917240.1| adenylyl cyclase class-3/4/guanylyl cyclase [Paracoccus denitrificans PD1222] gi|119376780|gb|ABL71544.1| adenylyl cyclase class-3/4/guanylyl cyclase [Paracoccus denitrificans PD1222] Length = 596 Score = 45.3 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 22/198 (11%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEW--------SRAITFLNQKKKNAKEWNRN 224 A+R +A D+ PD A+ EW A+ K A + + Sbjct: 375 ARRLFEEARDLDPDYGRSYAAM--SRTFNVEWRYNWTSNPDAALNQALVLAKRAVQCDAL 432 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L + K + +L L N L + +A +LE Sbjct: 433 DSRGFSEMGLAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAYVRQGERAVQLLE 492 Query: 285 KIWKVNPH-PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++NP+ P+ + + Y H K L + + E+ +++ + Sbjct: 493 RAMRLNPYFPDAYLWFLGDAYFHHGDYG-----KTIETLSRMR-DQSEAHRLLAASHALL 546 Query: 339 GSIDQAHAKAMLAMKIAP 356 G +D+A A M++ P Sbjct: 547 GQMDEARRHAGAVMRVHP 564 >gi|322699659|gb|EFY91419.1| pre-mRNA-splicing factor prp1, putative [Metarhizium acridum CQMa 102] Length = 925 Score = 45.3 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 112/328 (34%), Gaps = 43/328 (13%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-- 151 SI AR +++Y + L + A ER + E++ Q Sbjct: 535 SINRGKYDTARAIYAYAIRVFYNSRT-----LRMAAADLERNHGTKESLWEVLEQAVDAC 589 Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T E L E + G++++A+ +A + +P+ + A V+ +A Sbjct: 590 PTSEDLWMMLAKEKWQAGEVDNARLVLKRAFNKNPNNENIWLAAVKLESENDNAEQARKL 649 Query: 211 LNQKKKNAKE--------------WNRNRAILLIARSLEN---------------ADKGD 241 L ++ A +A+ L+ ++L+ D G Sbjct: 650 LEIAREQAPTDRVWMKSVVFERVQGQVEKALDLVLQALQLFPAAAKLWMLKGQIYEDLGK 709 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYT 300 + +K+ SI + A+ KA +L++ P P++ Sbjct: 710 TAQAREAYAAGVKVVPKSIPLWLLYARLEEKSGMIIKARSVLDRARLAVPKSPQLW--CE 767 Query: 301 HLLSENTVGKLKRALRL-EEINKESVESLVIVSKIALEMGSIDQAHA-KAMLAMKIAPRK 358 + E G + +A + + +E +S ++ + + Q + K+ Sbjct: 768 SVRLERRAGNMSQAKSIMAKARQEIPKSGLLWVEQIWHLEPRTQRKSLSLEAIKKVDNDP 827 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSAL 386 +F+ +A+I A+ +K W + AL Sbjct: 828 LLFVGVARIFWADRK-LEKAQNWFEKAL 854 >gi|153803505|ref|ZP_01958091.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124120966|gb|EAY39709.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 389 Score = 45.3 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 101/342 (29%), Gaps = 65/342 (19%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFEQLIDEPEHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + + Y +EW +AI Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIECATALV 168 Query: 216 KNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K ++ N A ++ + + ++L+ + A+I K + Sbjct: 169 KLGRKRMKVNIAHFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNE 228 Query: 275 KKRKAEVILEKIWKVNPHPE----------IANIYTHL-LSENTVGKLKRALRLEEINKE 323 +K LE + + + +A Y HL ++ + L+R + NK Sbjct: 229 DYQKTIDHLEMVLEQ----DIDFIGEVLNTLAECYHHLGREQDLITFLRRCIA----NKA 280 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYW 381 V + ++++++ + I A + P + F L I +A L Sbjct: 281 GVSAELMLAQLVAQHEGIAAAQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLST 340 Query: 382 TQSALHAMP--DPLWISDDGYLSSV---WLPLSPISKTLCYF 418 Q + P + S+ W P K Sbjct: 341 LQRLVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKNWGSI 380 >gi|167763146|ref|ZP_02435273.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC 43183] gi|167698440|gb|EDS15019.1| hypothetical protein BACSTE_01516 [Bacteroides stercoris ATCC 43183] Length = 283 Score = 45.3 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 70/226 (30%), Gaps = 47/226 (20%) Query: 76 LHKRNYDKGYKA---------------LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY 120 +R Y+K ++ L + + LA+ +S V + E Sbjct: 71 RRQRKYEKALESYNFALNIAPRAVPILLNRATIYMELGRNNLAQADYSLVLDLEKDNEEA 130 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L L+ I + +R Y +A E +L++ T L R G A R Sbjct: 131 L--LMRAYIYMQQRDYKMAKADYERLLKVNPTSYNGRLGLATLEQREGKYEEALRLLNTM 188 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + K +N + A+L +AR+ D Sbjct: 189 IA------------------------------AKGENRQLSPSQYAMLYVARAGVEKDLH 218 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E++ L + + + ++Q KK A+ EK Sbjct: 219 HTDMALVDLEEAISLDSSQPEIYLMRGEIYLAQKKKELAKRDFEKA 264 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 11/160 (6%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK--- 285 L R++ ++ + + +LKL + ++ + Q ++RK E LE Sbjct: 26 LCDRAVTYTEQDSLPQAETYIRRALKLEPANPHNALLFSNLGTIQRRQRKYEKALESYNF 85 Query: 286 IWKVNPH--PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P P + A IY L N + ++ K++ E+L++ + I ++ Sbjct: 86 ALNIAPRAVPILLNRATIYMELGRNNLAQ--ADYSLVLDLEKDNEEALLMRAYIYMQQRD 143 Query: 341 IDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKIL 379 A A +K+ P L LA +EQ + + Sbjct: 144 YKMAKADYERLLKVNPTSYNGRLGLATLEQREGKYEEALR 183 >gi|83589994|ref|YP_430003.1| hypothetical protein Moth_1146 [Moorella thermoacetica ATCC 39073] gi|83572908|gb|ABC19460.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 299 Score = 45.3 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 18/228 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R+G+L +A AL ++P + Y ++W+ A + K + Sbjct: 71 LRLGELETALDCYRTALKLAPRNIDILINTGGCYQRLEQWAEAYRCFYRAWK----YQPR 126 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LL + + ++L L A +L + +A E Sbjct: 127 DVDLLNNLGVCLVQLERPEEALDYYRQALALAPAEGEIIGNLAAALARCRRWPEAVTCFE 186 Query: 285 KIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K ++ P ++ A L + + A L + + + +++G Sbjct: 187 KALRLLPE-DVSIINNAAACLEALGKCYLAAPLYARALA-LKPGEPQIRQNYAACLMKLG 244 Query: 340 SIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKI-----LYW 381 + A +++ P + LL I +A + +T W Sbjct: 245 DLATARKIVEGLLRLYPEHRPAWQLLGTIYEA-TGDTGAAAGCYNRAW 291 >gi|225077206|ref|ZP_03720405.1| hypothetical protein NEIFLAOT_02261 [Neisseria flavescens NRL30031/H210] gi|224951458|gb|EEG32667.1| hypothetical protein NEIFLAOT_02261 [Neisseria flavescens NRL30031/H210] Length = 402 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 61/185 (32%), Gaps = 18/185 (9%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155 AR++ + QQ ++ L ++ + + A +L P T R Sbjct: 70 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVNEKRAR 126 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ L G ++ A++ L + A + ++ Y ++W +AI Sbjct: 127 VLFELAQNYQSAGLVDRAEQIF---LGLQEGDMAREARQHLLSIYQQDRDWEKAIEMAQL 183 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSL 270 + + + A + K + + + A+E+ K C A+I Sbjct: 184 LSHDEQTYQFEIAQFYCEIAQAALFKSNFDTARYNIGKALEANKKC---TRANIILGDIE 240 Query: 271 ISQNK 275 Q Sbjct: 241 YRQGN 245 >gi|209522334|ref|ZP_03270955.1| cellulose synthase operon C domain protein [Burkholderia sp. H160] gi|209497228|gb|EDZ97462.1| cellulose synthase operon C domain protein [Burkholderia sp. H160] Length = 1099 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 6/122 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL SA L PD P + A+ + Y A + A+T + R Sbjct: 262 RQRGDLASAYDVIAPWLAAMPDNPDLQAALGRLYASAGDDRNALTSFRVALQ-----RRP 316 Query: 225 RAILLIARSLENADKGDM-IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + L+ ++ A + A ++L L N + ++ K A L Sbjct: 317 DDLNLLQAAISAAAGSKQFSYAETLAQQALALAPNDPGVLATVGRMYRAEGKLSLASSYL 376 Query: 284 EK 285 ++ Sbjct: 377 QR 378 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 70/231 (30%), Gaps = 25/231 (10%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------N 217 + GD A A+ +P + A + + + + ++ + Sbjct: 184 QQAGDPARALSLVRGAMSAAPGNTDLLLQYAGILSAAGQQAE-LGTVMRQLQGMQLTPQQ 242 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHD---AIESLKLCDNSIMASICAAKSLISQN 274 ++N ++I ++ +GD+ ++Y + ++ + A + S Sbjct: 243 RTDFNDLNIGIVIRQADAVRQRGDLASAYDVIAPWLAAMPDNPDLQAA---LGRLYASAG 299 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVI 330 R A + P ++ + + + + A L + L Sbjct: 300 DDRNALTSFRVALQRRPD-DLNLLQAAISAAAGSKQFSYAETLAQQALALAPNDPGVLAT 358 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 V ++ G + A + ++ A L+ + + T+ W Sbjct: 359 VGRMYRAEGKLSLASSYLQRSLVAANTP----LMTNTPR--NAGTNVPRGW 403 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 17/185 (9%) Query: 132 AERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A A E +L P + L R G + +A+ L PD Sbjct: 39 ARGDLGTARSLFEDALLNKPDDPWLRL-DLARIYVRQGAVANARSMMDGLLATHPDMTDA 97 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 A ++WS + L++ R A+ + L + DM Sbjct: 98 LYASALLSAETQDWSTGLAQLDR----IAPAQRTDAMTTLQHRLWVHQQADMATRLAKNG 153 Query: 251 ESLKLCDNSIMASICA----------AKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY 299 ++ + A A A + +A ++ P + ++ Y Sbjct: 154 QTQQAIATLRAAEPVAGNNPELIGVIAGAYQQAGDPARALSLVRGAMSAAPGNTDLLLQY 213 Query: 300 THLLS 304 +LS Sbjct: 214 AGILS 218 Score = 37.2 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 27/212 (12%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GDL +A+ AL PD PW+ + + YV + A + ++ + Sbjct: 41 GDLGTARSLFEDALLNKPDDPWLRLDLARIYVRQGAVANARSMMDGLLATHPDMTDALYA 100 Query: 228 LLIARS--------LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + L D+ A DA+ +L+ + A + L + ++A Sbjct: 101 SALLSAETQDWSTGLAQLDRIAP-AQRTDAMTTLQHRLWVHQQADMATR-LAKNGQTQQA 158 Query: 280 EVILEKIWKVNP----HPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 L P +PE+ A Y + L + + L+ Sbjct: 159 IATLRAA---EPVAGNNPELIGVIAGAYQQA--GDPARALSLVRGAMSAAPGNTDLLLQY 213 Query: 332 S---KIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + A + + + M++ P++ Sbjct: 214 AGILSAAGQQAELGTVMRQLQ-GMQLTPQQRT 244 >gi|319637623|ref|ZP_07992389.1| hypothetical protein HMPREF0604_00012 [Neisseria mucosa C102] gi|317400778|gb|EFV81433.1| hypothetical protein HMPREF0604_00012 [Neisseria mucosa C102] Length = 389 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 80/248 (32%), Gaps = 33/248 (13%) Query: 41 PFVILSILYFFLFAWILLFAVSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA 96 +VIL + + + + +R L + YK+L L+ Sbjct: 5 LWVILLPIVLLPVFFAMGWFAARVDMKTVLKQAKSIPAGF--------YKSL-DALVDRN 55 Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---- 152 + AR++ + QQ ++ L ++ + + A +L P T Sbjct: 56 SG--RAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVNEK 110 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITF 210 R ++ L G ++ A++ L + A + ++ Y ++W +AI Sbjct: 111 RARVLFELAQNYQSAGLVDRAEQIF---LGLQEGDMAREARQHLLSIYQQDRDWEKAIEM 167 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAA 267 + + + A + K + + + A+E+ K C A+I Sbjct: 168 AQLLSHDEQTYQFEIAQFYCEIAQAALFKSNFDTARYNIGKALEANKKC---TRANIILG 224 Query: 268 KSLISQNK 275 Q Sbjct: 225 DIEYRQGN 232 >gi|157812770|gb|ABV81130.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Speleonectes tulumensis] Length = 286 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVSEAEECYNTALRLCPTHADSLNNL--ANIRREQGYIEDATRFYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGAMQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + S A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVSEAEECYNTALRLCPT----HADSLNNLANIRR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEDATRFYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G ++ R +IN ++ ++ + + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGAMQCYTRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 22/178 (12%), Positives = 55/178 (30%), Gaps = 11/178 (6%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G ++ A+ AL + P + A F + + Sbjct: 26 LANALKEKGQVSEAEECYNTALRLCPTHADSLNNLANIRREQGYIEDATRFYLKALEVFP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E+ A + +G + + E++++ A +L + A Sbjct: 86 EF----AAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGA 141 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A++ H S N ++ ++ + ++ ++ Sbjct: 142 MQCYTRAIQINPAFADAHSNLASV--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197 >gi|326482418|gb|EGE06428.1| pre-mRNA-splicing factor clf1 [Trichophyton equinum CBS 127.97] Length = 675 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%) Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183 ++Y A + L P ++ A+ S Y + GD + + + + Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237 +P + + + + + R + + + W R + + E Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376 Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D + E LKL + A+ I Q A L + + P Sbjct: 377 ENEDAERARQIYTECLKLIPHKKFTFAKIWLMKAEFEIRQLDLVLARKTLGQAIGMCPKD 436 Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ Y + E + + K + + N ES + +++ + +++A A L Sbjct: 437 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 495 Query: 351 AM 352 + Sbjct: 496 GI 497 >gi|237747600|ref|ZP_04578080.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13] gi|229378962|gb|EEO29053.1| TPR repeat-containing protein [Oxalobacter formigenes OXCC13] Length = 605 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 20/269 (7%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + L+ + + N L +L IA A + MM T+ Sbjct: 48 DDLLSADEQAANLKSDLLPNIPLSNDLLYQILSADIAEQRGFEVYAFDT--MMDAAKETK 105 Query: 154 --EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A + + ++ + GD A R K ++P + + V+ + Sbjct: 106 DPRLARRAAEIAVKARKAGDALDATRLWHK---LAPQSVEAERFFLGFLVVENKLGEVRD 162 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-IMASICAAK 268 + A R L + + A+ +E + L + A+ + Sbjct: 163 VFASRLAKASPAERP---ALFYQFQQILSGTRDKAAAFSVMEDV-LKPYLDMPAAHISLS 218 Query: 269 -SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 S N +A+ +K + P E A + S ++ ++ E + E Sbjct: 219 VSAFLNNDSVRAKEEAQKALALKPDSETAVLALAQASSDSNEAIEILSGFLEKYPNAREV 278 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +++ ++ D+A + P Sbjct: 279 RIAAARLMIKQKQYDKAKKEFEKIRLSQP 307 >gi|296127464|ref|YP_003634716.1| TPR domain-containing protein [Brachyspira murdochii DSM 12563] gi|296019280|gb|ADG72517.1| TPR domain-containing protein [Brachyspira murdochii DSM 12563] Length = 645 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 92/300 (30%), Gaps = 46/300 (15%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 N +A + S + H+ + L L I L + + A + + + A Y Sbjct: 77 NFSMAETLISDAERYHSRNYRLLERKLT--IELLNNRNSEARTTANTIKNLDSKNYLASY 134 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + S R G +A +A I P T A+ Y+ A+ N+ N Sbjct: 135 AEGVLSERAGYYKTAMSMYERARVIDRVRPEATTALAYLYLAIGSNETALNLFNENMTNN 194 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + L R L A+ ++ +L N A I A LIS N+ + Sbjct: 195 PRMAESYYHLANYRYLNK----QYNAALNEVNNALFYYTNYSDAEILKANILISLNRYDE 250 Query: 279 AEVILEKIWKVNPHPE-----------IANI----------------YTHLLSENTVGKL 311 A ILE + P+ I ++ Y E+ +G+L Sbjct: 251 AIAILEYM------PDTSFRNNYKYYYIGSVYEGADNYVRAKGAYINYLKAKPEDELGRL 304 Query: 312 KRALRLEEIN--KESVESLVIVSKIALEM-----GSIDQAHAKAMLAMKIAPRKEIFLLL 364 L N + + L +A A +++ P L+ Sbjct: 305 AYERVLIHTNPTPDYERDRAALYYGNLASYYTRLADNVRAQAYLKHMLRLNPANTYARLM 364 >gi|298492037|ref|YP_003722214.1| TPR repeat-containing protein ['Nostoc azollae' 0708] gi|298233955|gb|ADI65091.1| TPR repeat-containing protein ['Nostoc azollae' 0708] Length = 374 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 12/164 (7%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + G +A +AL +P + + AI + A Sbjct: 138 GLALQKQ--GQKEAAIAAYRQALAANPKMAAAQYNLGVILYEEERCQEAI----AAYQEA 191 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 +RN A ++ +G + + + LKL + +A ++ Q + + Sbjct: 192 INLDRNNANAYFNLAIALQQEGQLEQAIATYRQILKLNPENTVAYNNLGSLMVIQGQPSE 251 Query: 279 AEVILEKIWKVNPHPEIA------NIYTHLLSENTVGKLKRALR 316 A I +K NP +A +Y + LKRA + Sbjct: 252 AIAIYQKAIGQNPKNALAYYNLGVTLYNQGNLKEANAALKRARQ 295 >gi|239817417|ref|YP_002946327.1| hypothetical protein Vapar_4450 [Variovorax paradoxus S110] gi|239803994|gb|ACS21061.1| Tetratricopeptide domain protein [Variovorax paradoxus S110] Length = 311 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 16/150 (10%), Positives = 42/150 (28%), Gaps = 6/150 (4%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L Q + + ++ P L + + A +A + Sbjct: 106 LRADALRQTEQAAQSEKAYRRLMGTP-LEGAGYRGLGLLAGARSNYAEAVLLLKQAQRHA 164 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + + + A L Q + + + +A L + + + Sbjct: 165 PTDALLLSDLGYAQLRSGSTDEARLPLMQALQLRPDSAQAQANLALY-----LELTNQQE 219 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQN 274 +++ ++ + A AA+ L Sbjct: 220 QAAAMMDANRMSPAARSAVKEAAQQLRRGG 249 >gi|15639635|ref|NP_219085.1| hypothetical protein TP0648 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025873|ref|YP_001933645.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum SS14] gi|3322946|gb|AAC65621.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018448|gb|ACD71066.1| hypothetical protein TPASS_0648 [Treponema pallidum subsp. pallidum SS14] Length = 682 Score = 44.9 bits (105), Expect = 0.026, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 87/278 (31%), Gaps = 24/278 (8%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + + AR + + ++ + L +I +++ + + A + L+ A Sbjct: 124 VGQGELDQARSLFEEILARYPNDVDARFGL--AEIEVSKGRLSSARLLYQAALERQAENR 181 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+ SL S G A Y +AL D V L + A +L + Sbjct: 182 KALLSLALISYEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERA 241 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + R RA+L S +G + + ++ + A SL+ Sbjct: 242 LHIKSAYPRARALL----SAVLYARGAYERAVAQCDQRIRADRTQVDAWYVKTLSLLKLG 297 Query: 275 KKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENTVGKLKRALRLEEINKESVESL 328 K +A + V+P ++ HL E+ ++L + + + Sbjct: 298 KHTEALATAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYR-----MQLARFHTQKADG- 351 Query: 329 VIVSKIALEMGSIDQAHAKAM----LAMKIAPRKEIFL 362 ++ + ++D+ + L Sbjct: 352 --FARRNMSRQALDEYRRALKVYPYDGAAREAYARLLL 387 Score = 43.8 bits (102), Expect = 0.063, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 37/251 (14%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A + ++ A E + L+ A+ A L +G+ + A + KA + Sbjct: 51 AGRKAHVQEDWHAAIEFYQEALKKNASYNLAYRGLAECFYALGEYDQALHHVRKAQKLM- 109 Query: 186 DAPWVTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + +++ E +A + + R + KG Sbjct: 110 ----AQDLSLEKLCAFSLVGQGELDQARSLFEEILARYPNDVDAR----FGLAEIEVSKG 161 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---- 296 + ++ +L+ + A + A +A +E+ + H + A Sbjct: 162 RLSSARLLYQAALERQAENRKALLSLALISYEAGHYPRALTYVERA--LQYHGDNAQVHF 219 Query: 297 -NIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEM-----GSIDQAHAK 347 Y L E+ L+RAL ++S ++ L G+ ++A A+ Sbjct: 220 FAAYLATLRAHYEDAERYLERAL--------HIKSAYPRARALLSAVLYARGAYERAVAQ 271 Query: 348 AMLAMKIAPRK 358 ++ + Sbjct: 272 CDQRIRADRTQ 282 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 93/278 (33%), Gaps = 28/278 (10%) Query: 84 GYKALYTGLMSIAAHNIPL--ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 Y+ L ++ ++ L RK ++Q + L + + + + A Sbjct: 81 AYRGLAECFYALGEYDQALHHVRKAQKLMAQDLSLEK------LCAFSLVGQGELDQARS 134 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-- 199 E +L A + L G L+SA+ AL+ +A++ + Sbjct: 135 LFEEILARYPNDVDARFGLAEIEVSKGRLSSARLLYQAALE---RQAENRKALLSLALIS 191 Query: 200 -LAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 A + RA+T++ + + + + +A + + + I+S Sbjct: 192 YEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERALHIKSAYPRA 251 Query: 258 NSIMASICAAKSLISQ-----NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 ++++++ A+ + +++ +A+ W V + L L Sbjct: 252 RALLSAVLYARGAYERAVAQCDQRIRADRTQVDAWYV-------KTLSLLKLGKHTEALA 304 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSI-DQAHAKAM 349 A ++ +++ +IA+ D+ + Sbjct: 305 TAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYRMQLA 342 >gi|326476411|gb|EGE00421.1| pre-mRNA splicing factor CLF1 [Trichophyton tonsurans CBS 112818] Length = 547 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%) Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183 ++Y A + L P ++ A+ S Y + GD + + + + Sbjct: 129 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 188 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237 +P + + + + + R + + + W R + + E Sbjct: 189 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 248 Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D + E LKL + A+ I Q A L + + P Sbjct: 249 ENEDAERARQIYTECLKLIPHKKFTFAKIWLMKAEFEIRQLDLVLARKTLGQAIGMCPKD 308 Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ Y + E + + K + + N ES + +++ + +++A A L Sbjct: 309 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 367 Query: 351 AM 352 + Sbjct: 368 GI 369 >gi|307105124|gb|EFN53375.1| hypothetical protein CHLNCDRAFT_25984 [Chlorella variabilis] Length = 471 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 64/229 (27%), Gaps = 7/229 (3%) Query: 59 FAVSRFFLSCPAMLFHMLHKRNY---DKGYKALYTG--LMSIAAHNIPLARKMHSYVSQQ 113 AV + C + + AL+ LM + L R + Sbjct: 165 LAVLAAEMDCVEEARKWFREGTRTVKGRASHALWQAWALMEQKQGDRDLVRALLK--RGL 222 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 +L E A + ++ + + G+ A Sbjct: 223 EVSPRSRYTHLSWALWEKEEGNVEEARRLFKRGSELNPRDAAILQAWARMEEEQGEAEEA 282 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 +R +A + P +V +A + A Q A + + +++ A + Sbjct: 283 RRLFKRASRVDPKHLYVWQAWGCLEYRQHNYDTARELFQQGIWAAPPRDPSVSLVFQAWA 342 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + D G+ + ++K S + + A+ +A + Sbjct: 343 MLERDAGNTQLARELLKCAVKADPRSEPSWLVWAEMEEDLGFLERAAEL 391 >gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp. PCC 7424] gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp. PCC 7424] Length = 730 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 79/242 (32%), Gaps = 16/242 (6%) Query: 96 AAHNIPLARK-----MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 + A K + +Y N + ++ ++ + + A E ++ Sbjct: 400 GKGDALQALKRYQNALEAYDEAIQLQPNYWQAWMERAEVLEKLGKNSEAIYSYEKVIDFT 459 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-EAVVQQYVLAKEWSRAIT 209 A +L ++ D +A K+L I+PD W + L + AI Sbjct: 460 PNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLK-NYEEAIK 518 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + K +++ + + + ++++ + A + Sbjct: 519 SYEKAVKINPSFSQ----AWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIA 574 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK----LKRALRLEEINKESV 325 L N+ R+A E+ ++ P+ Y + T+ + ++ +N ++ Sbjct: 575 LNRLNRYREALKAFEEGTQIQPN-SFEAWYQKAWTLQTLNRYGEAVEAYNTATRLNPKNP 633 Query: 326 ES 327 ++ Sbjct: 634 QA 635 >gi|157812762|gb|ABV81126.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Mastigoproctus giganteus] Length = 290 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GLVQEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ ISP + + A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAISSYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A + A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAISSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 15/168 (8%) Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A + AL + P + A + + E+ A Sbjct: 36 VQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAH 91 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + +G + + E++++ A +L + A + ++ Sbjct: 92 SNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQI 151 Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 NP H +A+I H S N + ++ + ++ ++ Sbjct: 152 NPAFADAHSNLASI--HKDSGNIPEAISSYRTALKLKPDFPDAYCNLA 197 >gi|158522481|ref|YP_001530351.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511307|gb|ABW68274.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 581 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 5/176 (2%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 Y + E +++ FA+ L G + A+ + KAL + P +P + Sbjct: 410 YRNSITIFEQAVKVTGRNFFALTGLGNAYAEQGRPDKAEVFFKKALLLQPGSPGAHANLG 469 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +A T + A + G A+ ++L Sbjct: 470 LVAAAQGAEQKAKTHFTAALAVDPFF----APAHVGMGNLLLAAGRPEAAIFHYQQALAT 525 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGK 310 + + A A +L + KA L K PH PE+ LL+ + Sbjct: 526 DPDLVSAHNNLALALAASGATDKALNHLHKTIPRFPHRPELRRTLARLLARTGARR 581 >gi|16264266|ref|NP_437058.1| adenylate cyclase protein [Sinorhizobium meliloti 1021] gi|15140391|emb|CAC48918.1| probable adenylate cyclase protein [Sinorhizobium meliloti 1021] Length = 624 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 14/148 (9%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + L + + + + +++ L + A A++ +Q K +A ++ Sbjct: 420 AEAHASLGLALSLRERHSEAMAEFDQAITLDPDLFEAHYFYARACFTQGKLDEAARHFQR 479 Query: 286 IWKVNPHPE-------IANIYTHLLSE---NTVGK--LKRALRLEEINKESVESLVIVSK 333 + P+ + N+ L E NT + + RA R + E+ + + Sbjct: 480 AADIK--PDDYQALLVLINVLRSLGREQEMNTAAREGVARAERELMMRPENPRPAYLGAV 537 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +G +D+A A A+ P + Sbjct: 538 GLAALGELDRAKEWAGRALATDPDDRLA 565 >gi|332531337|ref|ZP_08407245.1| HemY domain protein [Hylemonella gracilis ATCC 19624] gi|332039201|gb|EGI75619.1| HemY domain protein [Hylemonella gracilis ATCC 19624] Length = 470 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 77/313 (24%), Gaps = 36/313 (11%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M L+ F+ +L + + + ++ V+I W S L L Sbjct: 1 MRSLVWLLFLFALAVGAALFLADNTGLVTIFWPPYRLDVSANFAALALLVSFLVLHALLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV--------SQ 112 L P + + L + A RK V Sbjct: 61 GLSLLLGMPERARLWRRRHQERVQQQGLLDAMAHWTAGRYLRGRKAAENVVEQTQSLMRN 120 Query: 113 QHTFHNE----YLVYLLE----------------VQIA------LAERQYNIAHEKLEMM 146 + L +LL Q A + M Sbjct: 121 EQALPQSIRTVALAHLLAAECAHALQDRPRRDEHAQAALDAVAGELAGAGDSVKRGAVRM 180 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 R+ + + D +A R + ++ +A + Sbjct: 181 RDAQEVRDGVQLRMARWAYEDRDAQAALRRVDELPQGVARRLAALRLRLRVTRMAGKPLA 240 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ L K+ + +++ E A A ESL+ + + + Sbjct: 241 ALETLRLLSKHRAFSDTATQVIVRGLVTEVLRDAHDQAQLLQAWESLEPAERDLPEAALQ 300 Query: 267 A--KSLISQNKKR 277 A + L N+ R Sbjct: 301 AGERMLALSNQGR 313 >gi|326201126|ref|ZP_08190998.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium papyrosolvens DSM 2782] gi|325988694|gb|EGD49518.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium papyrosolvens DSM 2782] Length = 292 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 4/158 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E +L+I A Y L + + A KA++I+PD Sbjct: 43 GKQQDAVETYRKVLEINPCEARAHYGLAIIYDDRKEFDKAIEMYQKAIEINPDYTKAYFF 102 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A +K + ++ + + G + + L Sbjct: 103 LANSCDEGGRKEEA-AEYYEKAAELEPYHFW---AYNNLAAVYEEMGKYDKALIAIRKGL 158 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L N A A + +KA + NP Sbjct: 159 RLEPNHFKALFNAGVIMNRLGYTQKAVEYYNTSIEKNP 196 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 40/116 (34%), Gaps = 4/116 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G A Y KA ++ P W + Y ++ +A+ + + + E N +A+ Sbjct: 111 GRKEEAAEYYEKAAELEPYHFWAYNNLAAVYEEMGKYDKALIAIRKGLR--LEPNHFKAL 168 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + G + S++ + + + + ++ KA ++ Sbjct: 169 FNAGVIMNRL--GYTQKAVEYYNTSIEKNPRYPYSYLNLSLIFMEEHDVSKAIEVI 222 >gi|170063159|ref|XP_001866982.1| pre-mRNA-splicing factor prp1 [Culex quinquefasciatus] gi|167880889|gb|EDS44272.1| pre-mRNA-splicing factor prp1 [Culex quinquefasciatus] Length = 931 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 64/164 (39%), Gaps = 19/164 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLEAILQKAVAHCPKSEVLWLMG-AKSKWMAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +L+N + Sbjct: 627 ANPNSEDIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALDNLE---- 682 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 A+ +++K+ + AK + + + + + +L++ Sbjct: 683 -AALSLLEDAVKVFPDF-------AKLWMMKGQIEEQKKLLDRA 718 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 21/211 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P+ P A + + + A + + + Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEVNPLSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKGVIAQAARHIPTSVRIWIKAADLETEAKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + + E+ L RA+ SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVEIENPEDAKILLSRAVECCNT---SVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHN 374 A + P I+ A++E+AN +N Sbjct: 440 RKVLNKARENIPTDRQIWTTAAKLEEANGNN 470 >gi|148240556|ref|YP_001225943.1| TPR repeat-containing glycosyl transferase [Synechococcus sp. WH 7803] gi|147849095|emb|CAK24646.1| Glycosyltransferase of family GT2; modular; contains a TPR-repeat domain [Synechococcus sp. WH 7803] Length = 402 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 18/202 (8%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKE 220 R ++ + L+ P P+ + V + R + L Q + + Sbjct: 178 RRDKAERLRQSMEQWLEDQPGDPYACTKLGALEVSSGNHERGVNLLRQGLEQLPDGAGRT 237 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQNKKR 277 R +L + +L D Y A++ ++L A + A L+ N+ Sbjct: 238 AERYELLLNLGIALAPEDAVAAEGFYRQALDLPLDVRLSLG---ARLNLAALLMQANQLD 294 Query: 278 KAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332 +A + + PE+A + +L + L+ R E+N + ES + Sbjct: 295 EAIQLTTTACQRA--PEVALAWYNLGLMERRRGDLAASLRAYERSLELNPDHAESHQNFA 352 Query: 333 KIALEMGSIDQAHAKAMLAMKI 354 L G ID A A A+ Sbjct: 353 VARLIGGDIDGARASFRAAIDK 374 >gi|320538440|ref|ZP_08038307.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] gi|320144702|gb|EFW36451.1| tetratricopeptide repeat protein [Treponema phagedenis F0421] Length = 674 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 63/160 (39%), Gaps = 9/160 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++W AI F + K +N ++ + G+ + + ++ K N+ Sbjct: 48 AKEDWYTAIEFYQEALKKNASYN----LVYQGMAECFYALGEYEETLKNIKKAQKFMPNN 103 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 +LI K A+ + ++ K P+ ++ + + + G+L A L + Sbjct: 104 AELQNIEGFALIGLGKVGDAKKVFAEVLKTYPN-DLDSRFGMAEIDVVAGRLTAASMLYK 162 Query: 320 IN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 E+ ++L+ ++ I+ E G+ A + A++ Sbjct: 163 AALERQTENRKALLSLALISYETGNKQAAETYILQALRYH 202 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 14/166 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMML---QIPAT 152 A + A ++ ++ T + + L+ L I+ A + + + P Sbjct: 151 AGRLTAASMLYKAALERQTENRKALLSL--ALISYETGNKQAAETYILQALRYHGDYPQV 208 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 FA Y + G + AQ AL I P +E + ++ + I + Sbjct: 209 HFFAA---YLTAL-DGKYSEAQVRLETALKIQPHYKEASELLASILYAQGKYQKVIDICD 264 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 Q ++RN+A ++L G + A L + + Sbjct: 265 Q----LIAYDRNQAHAWYVKTLSLLKLGKNSEALQTAKLGLSVEPD 306 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 2/141 (1%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G I + A+K+ + V T+ N+ +I + + A + L+ Sbjct: 110 EGFALIGLGKVGDAKKVFAEV--LKTYPNDLDSRFGMAEIDVVAGRLTAASMLYKAALER 167 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A+ SL S G+ +A+ Y +AL D P V L ++S A Sbjct: 168 QTENRKALLSLALISYETGNKQAAETYILQALRYHGDYPQVHFFAAYLTALDGKYSEAQV 227 Query: 210 FLNQKKKNAKEWNRNRAILLI 230 L K + +L Sbjct: 228 RLETALKIQPHYKEASELLAS 248 >gi|125543580|gb|EAY89719.1| hypothetical protein OsI_11257 [Oryza sativa Indica Group] Length = 620 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 10/188 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R + A++ KA+ SP + +A L K N Sbjct: 284 IRAENNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLL----KIGHAVNPR 339 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 ++L + +L + + ++ ++ I + R A + + Sbjct: 340 DPVILQSLALLEYNYSSPNTARVLFRKASQIDPRHQPVWIAWGWMEWKEGNARTARTLYQ 399 Query: 285 KIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESLVIVSKIALEM 338 + VN E A E G A RL IN +S + + + + E Sbjct: 400 RALSVNSTNECAARCLQAWGVLEQRAGNYTAARRLLRSSLNINSQSEVTWMTWAALEDEQ 459 Query: 339 GSIDQAHA 346 G +A Sbjct: 460 GDPVRAEE 467 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 11/213 (5%) Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W AV++ RA + + ++ +G++ + + Sbjct: 174 WQCWAVLEHK--GGNIRRARELFDAA----TVADAKHIAAWHGWAILEIKQGNIKKARNL 227 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSE 305 + LK C + A + +A + ++ + NP +A + +E Sbjct: 228 LAKGLKYCGGNEYIYQTLALLEARAERFEQARTLFQQATQCNPKSCASWLAWAQVEIRAE 287 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 N K + + + ++ S + + E GSID+A + + PR + L Sbjct: 288 NNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLLKIGHAVNPRDPVILQSL 347 Query: 366 QIEQANSHNTDKILYWTQSAL--HAMPDPLWIS 396 + + N + + + A P+WI+ Sbjct: 348 ALLEYNYSSPNTARVLFRKASQIDPRHQPVWIA 380 >gi|323466654|gb|ADX70341.1| Putative O-linked transferase [Lactobacillus helveticus H10] Length = 415 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 32/264 (12%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172 F E L + +I L + + L ++ + + L ++ G + + Sbjct: 62 FPQEDLFKVYLAEIMLNDGDEDD---GLSLLYGVSKKSSAYLDGLLVQADYYQTNGLIET 118 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229 A+ +AL ++P + + + L+ + +A+ L Q++K E N N+ ++ Sbjct: 119 AKDKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKTFGEVNLNQRLIA 178 Query: 230 IARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L N + I H + I+S K +M ++ +A +L++ Sbjct: 179 TNAKLGNYEAAAKIIREHSSSLLDIDS-KYEAGLVMLAV---------GDDDQAIKLLDE 228 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMG 339 + +P +P +A Y H + L+ N E E+L + ++ A + Sbjct: 229 VIDQSPDYVNAYPLLAQAYEH--KHDNEQVLRTVQAGLAYN-ELDETLYSMGARAAANLN 285 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363 +D A +K AP + Sbjct: 286 QLDTAADLLEKGLKKAPDNSELRM 309 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 21/194 (10%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + E + ++ Y A E ++Q T + + R Sbjct: 121 DKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKT-----FGEVNLNQR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---------LAKEWSRAITFLNQKKKN 217 + N+ A I + +++ + +AI L++ Sbjct: 176 LIATNAKLGNYEAAAKIIREHS---SSLLDIDSKYEAGLVMLAVGDDDQAIKLLDEVIDQ 232 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + ++ +L A D ++ + + +L + A++ + N+ Sbjct: 233 SPDYVNAYPLLAQAYE-HKHDNEQVLRTVQAGLAYNELDETLYS---MGARAAANLNQLD 288 Query: 278 KAEVILEKIWKVNP 291 A +LEK K P Sbjct: 289 TAADLLEKGLKKAP 302 >gi|254415849|ref|ZP_05029606.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177276|gb|EDX72283.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 383 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 13/128 (10%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + SL G+ A T+AL +SP+ P YV + + AI LNQ + Sbjct: 238 LISLAGIKTEKGNYQEAIADLTQALRLSPNNPEAYYRRGNAYVELENYQAAIEDLNQVLR 297 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-- 274 + A+ +R + GD + D +++KL A + Q Sbjct: 298 LNPD----NAVAYFSRGYSRDELGDYQGAIADYNQAIKLNPEY-------ADAYYDQALE 346 Query: 275 KKRKAEVI 282 RKA I Sbjct: 347 DFRKAAEI 354 >gi|162455198|ref|YP_001617565.1| TPR domain-containing protein [Sorangium cellulosum 'So ce 56'] gi|161165780|emb|CAN97085.1| TPR domain protein [Sorangium cellulosum 'So ce 56'] Length = 686 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 78/227 (34%), Gaps = 25/227 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIPATREF 155 ++ A + E LL+ ++A + A + P + Sbjct: 119 GDLDAAAACYERAR-----DLEP--GLLQAVERLASLRGRRGAAAGVGPAATRGPESSLS 171 Query: 156 AVYSL--YFESCRIGDL--NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A +L E+ R+G ++A Y AL ++P A+ + A + AI L Sbjct: 172 APDALAALGETLRLGGRSDDAAVWY-RVALKLNPRMANAYTALGAIHADAGRFDEAIDDL 230 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + + ++ R L A + G + S E++ LC + A+ A L Sbjct: 231 RRALEIDRNFHVARDYLAAALG----ESGLLDESQAMYREAVALCPD-DPAAHSA--LLF 283 Query: 272 SQ---NKKRKAEVILEK-IWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + +++++ E W +A ++ + + R Sbjct: 284 NMPFWPNVTESDILAEARAWNARHARPLAAQAAPHTTDRSSDRRLRI 330 >gi|161507462|ref|YP_001577416.1| putative O-linked transferase [Lactobacillus helveticus DPC 4571] gi|160348451|gb|ABX27125.1| putative O-linked transferase [Lactobacillus helveticus DPC 4571] Length = 415 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 32/264 (12%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172 F E L + +I L + + L ++ + + L ++ G + + Sbjct: 62 FPQEDLFKVYLAEIMLNDGDEDD---GLSLLYGVSKESSAYLDGLLVQADYYQTNGLIET 118 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229 A+ +AL ++P + + + L+ + +A+ L Q++K E N N+ ++ Sbjct: 119 AKDKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKTFGEVNLNQRLIA 178 Query: 230 IARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L N + I H + I+S K +M ++ +A +L++ Sbjct: 179 TNAKLGNYEAAAKIIREHSSSLLDIDS-KYEAGLVMLAV---------GDDDQAIKLLDE 228 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMG 339 + +P +P +A Y H + L+ N E E+L + ++ A + Sbjct: 229 VIDQSPDYVNAYPLLAQAYEH--KHDNEQVLRTVQAGLAYN-ELDETLYSMGARAAANLN 285 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363 +D A +K AP + Sbjct: 286 QLDTAADLLEKGLKKAPDNSELRM 309 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 21/194 (10%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + E + ++ Y A E ++Q T + + R Sbjct: 121 DKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKT-----FGEVNLNQR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---------LAKEWSRAITFLNQKKKN 217 + N+ A I + +++ + +AI L++ Sbjct: 176 LIATNAKLGNYEAAAKIIREHS---SSLLDIDSKYEAGLVMLAVGDDDQAIKLLDEVIDQ 232 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + ++ +L A D ++ + + +L + A++ + N+ Sbjct: 233 SPDYVNAYPLLAQAYE-HKHDNEQVLRTVQAGLAYNELDETLYS---MGARAAANLNQLD 288 Query: 278 KAEVILEKIWKVNP 291 A +LEK K P Sbjct: 289 TAADLLEKGLKKAP 302 >gi|117923677|ref|YP_864294.1| hypothetical protein Mmc1_0362 [Magnetococcus sp. MC-1] gi|117607433|gb|ABK42888.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 804 Score = 44.9 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 27/249 (10%), Positives = 78/249 (31%), Gaps = 37/249 (14%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDI 183 L+ ++ +A + A + L + G + A++ +A+ + Sbjct: 367 LQGRLLVAMGKRERAEWVFWESTRRFPDNSLNYTELGQLLLKQPGREDEAEQILREAMAL 426 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + + + Y+ + A L + + N + +G + Sbjct: 427 DSNNIPPRTELGRLYMQQGKLEEAEQVL----REVIGLDSNDIHVRTELGRLYMQQGKLE 482 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + E++ L N+I + + Q K ++AE +L++ Sbjct: 483 EAEQVLQEAMALDSNNIPPRTELGRLYMQQGKLKEAEQVLQEA----------------- 525 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL- 362 ++ ++ + ++ ++ G ++A + I + Sbjct: 526 --------------MALDSNNIPPRTELGRLYMQQGKREEARWVLEQVLDIESEDHVARG 571 Query: 363 LLAQIEQAN 371 LL+++E+ Sbjct: 572 LLSRLERGE 580 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 78/238 (32%), Gaps = 38/238 (15%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQH---TFHNEYLVYLLEVQIALAERQYNIAHEKL-EM 145 G + +A A + +++ + + L LL Q + + A + L E Sbjct: 368 QGRLLVAMGKRERAEWVFWESTRRFPDNSLNYTELGQLLLKQ----PGREDEAEQILREA 423 Query: 146 MLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 M P T +Y + G L A++ + + + + V + + Y+ Sbjct: 424 MALDSNNIPPRTELGRLY------MQQGKLEEAEQVLREVIGLDSNDIHVRTELGRLYMQ 477 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + A L + R +G + + E++ L N+I Sbjct: 478 QGKLEEAEQVLQEAMALDSNNIPPR----TELGRLYMQQGKLKEAEQVLQEAMALDSNNI 533 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK--LKRALR 316 + + Q K+ +A +LE++ + SE+ V + L R R Sbjct: 534 PPRTELGRLYMQQGKREEARWVLEQV-------------LDIESEDHVARGLLSRLER 578 >gi|194364346|ref|YP_002026956.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3] gi|194347150|gb|ACF50273.1| TPR repeat-containing protein [Stenotrophomonas maltophilia R551-3] Length = 940 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 11/105 (10%) Query: 164 SCRIGDLNSAQRYATKALDISPDA-PWV--TEAVVQQYVLAKEWSRAITF--------LN 212 + G + A A +A P W A ++ ++ AI+ + Sbjct: 150 AYDAGQMGIAASKAEQAFRQQPKQGAWALLWVAALEAQQQPEQADVAISTALQLGAPNVE 209 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + R RA+LL ++ + GD A+ A +++KL Sbjct: 210 ELRARRVVLTRQRALLLAQQAYRSLSAGDDAAAIGHARDAVKLAP 254 >gi|254522146|ref|ZP_05134201.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp. SKA14] gi|219719737|gb|EED38262.1| Polysaccharide deacetylase domain protein [Stenotrophomonas sp. SKA14] Length = 890 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 6/99 (6%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +R RA R L+ + + E+LKL + A+ Q + Sbjct: 767 AGPASDRQRAQQANDRGLQLYREKQYDEAAAQFTEALKLRPDFAQAANNLGFVYYRQQRY 826 Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310 +A LE K++P H + + Y + + + Sbjct: 827 AEAARWLENTLKIDPSRAVAHLNLGDAYFNA-GDKPKAR 864 Score = 36.8 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 6/113 (5%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + R + A T+AL + PD + Y + ++ A +L K Sbjct: 782 RGL--QLYREKQYDEAAAQFTEALKLRPDFAQAANNLGFVYYRQQRYAEAARWLENTLKI 839 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 +RA+ + + GD + L L A+ A+ Sbjct: 840 DP----SRAVAHLNLGDAYFNAGDKPKARQAYTTYLALQPQGSGAAQARAQLE 888 >gi|254169261|ref|ZP_04876094.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei T469] gi|197621798|gb|EDY34380.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei T469] Length = 465 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 24/219 (10%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 ++ T +Y L + + + + + A + + Sbjct: 7 RKKKESTIVRDYAKTLEDAKALMNSGEDDRAQ--------------ILLRRINRWVSEDF 52 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D SA K +S E ++ ++ AI L + K + + N RA L Sbjct: 53 DRVSALSPNEK-KTLSKILTEAGEKMLVLK----DYEYAIKTLEKAK--SLDRNNVRAWL 105 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I R+L + + E++KL N++ A+I +L + + + A + + Sbjct: 106 DIGRNL-LERNVQIPYAVASLKEAVKLAPNNVEANILLGDALRMEGELKNALKAYFRALE 164 Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++P + ++ N + +N V LK+ L + E Sbjct: 165 IDPENEDVINKILKIEPDN-VEVLKKYAELLKKKGNYNE 202 >gi|223940068|ref|ZP_03631932.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] gi|223891253|gb|EEF57750.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514] Length = 478 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 83/256 (32%), Gaps = 38/256 (14%) Query: 165 CRIGDLNSAQRYATKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 +G L+ A K +D+ PD + A L + A + + + Sbjct: 181 MEMGRLDEAIEVYQKMIDLRPDLHSYARVA--HVRWLKGDLQGATEVMQMAVQATSPKDA 238 Query: 224 NRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A + + G++ + + +L+ + A + + L++ +++ +A Sbjct: 239 ETAAWVYSRMANYQLQAGNIDNALKHSEAALEFQKDYAPALLAKGRLLLADHREEEAIEP 298 Query: 283 LEKIWKVNPHPE----IANI-----------------------------YTHLLSENTVG 309 L + +NP P+ +A Y ++ Sbjct: 299 LRRAVALNPLPDYQWTLAEALRATGKPDAALENQIKQMGPASDPRTASLYLASTKQDPAT 358 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 ++ A E N+ V+S ++ G ++A + A+ + A I + Sbjct: 359 AVRLAQE-ELNNRGDVQSHDALAWALASAGQYEEAAVHSDAALAEGTQDARMFYHAGIIE 417 Query: 370 ANSHNTDKILYWTQSA 385 N N++K + A Sbjct: 418 ENRGNSEKAMQLLIEA 433 >gi|329297650|ref|ZP_08254986.1| tetratricopeptide repeat protein [Plautia stali symbiont] Length = 389 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 78/248 (31%), Gaps = 25/248 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R A+ L + G + A+ IS Sbjct: 83 GEVDRAIRIHQSLMESASLTYDQRLLAIQQLGRDYMAAGLYDRAEDMFSQLIDEIDFRIS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W +AI + K K+ + A +L+ D+ Sbjct: 143 -----ALQQLLLIHQATSDWQKAIEVAERLVKLGKDKQKGEIAHFYCELALQALSSDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILE--KIWKVNPHPEIAN 297 + + S SI + L+ Q + KA +LE K P + Sbjct: 198 RAMSLLKKGEAADHQSARVSIMMGRILMEQGEYAKAAQRLQRVLEQDKELVSETLPMLET 257 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y L + + R E N + + + ++ I + + A ++ P Sbjct: 258 CYQRLEQSDRWAQF--LQRCVEENTGAA-AELYLADILEQQQGQEAAQLYINRQLQRHPT 314 Query: 358 KEIF-LLL 364 + L+ Sbjct: 315 MRVLHRLM 322 >gi|113461116|ref|YP_719184.1| tetratricopeptide repeat protein [Haemophilus somnus 129PT] gi|112823159|gb|ABI25248.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 398 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 93/336 (27%), Gaps = 60/336 (17%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151 + A ++H + + E LL Q + Y+ A +++ P Sbjct: 91 GEVDRALRIHQALDSSSNYTFEQ--KLLAKQ--QLAKDFLTIGFYDRAENLYILLIDEPN 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 E A+ L + + A A K ISP A+ Y Sbjct: 147 YAENALQQLAVIYQKTKEWKKAINVAEKLAKISPT--EDNIALAHYYCE----------- 193 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +D+ + H ++L + S+ ASI A+ I Sbjct: 194 -------------------YSLTLGSDEQQQAQAIHILQQALNVSKTSVRASILIAERYI 234 Query: 272 SQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + ++A LE + + P + Y L + + L + Sbjct: 235 VNLEYQRAVQHLENVLIQNADYMSEILPALKYCYQELNR---LDNFELFLIRASQTSNN- 290 Query: 326 ESLVIVSKIALEMGSID--QAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYW 381 S V ++ L A K ++ P I + QI+ A + + L Sbjct: 291 -SAVDLALSDLIAEKDGIVAAQTKLHQQLEQHPSTFILHRFIQYQIDAAENGKAKESLIL 349 Query: 382 TQSAL--HAMPDPLWIS-DDGYLSSVWLPLSPISKT 414 + + GY + P + Sbjct: 350 LHKIVGDRIARGFDYRCSHCGYQTHKLSWNCPSCRK 385 >gi|288960382|ref|YP_003450722.1| TPR repeat-containing protein [Azospirillum sp. B510] gi|288912690|dbj|BAI74178.1| TPR repeat-containing protein [Azospirillum sp. B510] Length = 1199 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 71/244 (29%), Gaps = 11/244 (4%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + + A +L A++ L + + G A +AL Sbjct: 8 LAQAVAHHQAGRAMEAERGYRAVLATDPRNADALHLLGVLALQSGRAEEAVTLIGEALAQ 67 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + + + A + A+ + + R L A +++ G Sbjct: 68 AKGVADYWDNLGSALSAAGRPAEAVQAHRNAATLDAQGAQRRLNLGNALAVQ----GRHQ 123 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298 + +L L + A ++++ A L+ ++ P H + + Sbjct: 124 EAERAFTAALALKPDYAKAWYNLGNGFAARHRYADAVTALDHAVRLTPGMVEAHNNLGDA 183 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + R + + + + + + G+++ A A+K PR Sbjct: 184 LAMTGRLDEAIVQHRL--VTRHRPDDATAHYNLGAVLQQKGALEGAEIAYRQALKRNPRH 241 Query: 359 EIFL 362 L Sbjct: 242 SAAL 245 >gi|198284408|ref|YP_002220729.1| tetratricopeptide repeat-containing protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667320|ref|YP_002427076.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248929|gb|ACH84522.1| Tetratricopeptide TPR_2 repeat protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519533|gb|ACK80119.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 279 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 5/126 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL + A + A +L P L + R GD+ A +A Sbjct: 87 TDLLRARALAATGEPAQAERYFRRVLGTP-LAAQGYQGLGLIAARGGDITRAIPLFQRAT 145 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P + + + K W+ A L + + A + R + + + L +GD Sbjct: 146 REDPTNAGILNDLGYAALQGKAWNVARNALFRAGELAPQDERVWSNIALYYLL----RGD 201 Query: 242 MIASYH 247 + Sbjct: 202 SFRAQQ 207 >gi|170744697|ref|YP_001773352.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp. 4-46] gi|168198971|gb|ACA20918.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp. 4-46] Length = 839 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 63/209 (30%), Gaps = 21/209 (10%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G L+ A +AL +P + L E RAI L + + Sbjct: 265 KQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTRAIALNPKSP-- 322 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ--NKKRKAEVI 282 + L R G + D E+L+ + + + A + L + + A Sbjct: 323 --VALTFRGDAYRQAGQPDRAIADYDEALRAVPDFV--AAFAGRGLAREQRGEASLARAD 378 Query: 283 LEKIWKVNPHPEIA-------------NIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 E+ ++P + A L +E G + A S Sbjct: 379 FERAMGLSPDRDAALARPAQALAHERIAALASLQAERARGATRAAESRIAEESAKRASAT 438 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ A + +A A+A + R Sbjct: 439 QAAEDARDARLRAEAEAQARSEAESRARA 467 >gi|149920333|ref|ZP_01908803.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] gi|149818775|gb|EDM78217.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] Length = 1618 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L ++ + RA+L + + ++ D A+ + +L L A + Sbjct: 15 EVLAALQQTPEHERELRAVLAFTIARWSLERSDENAAVENLRAALALVPELRPAMRMLYR 74 Query: 269 SLISQNKKRKAEVILEKIWKVNPHP-EIANIYTH 301 +N R A L++ + HP E A +Y Sbjct: 75 VYGDRNDVRNAVTFLDQEIRATRHPREAAALYRE 108 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 21/193 (10%), Positives = 56/193 (29%), Gaps = 10/193 (5%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN----IAHEKLEMM 146 G +++ + AR + Q H + L AL + + + ++ Sbjct: 545 GELALELGDRDKARDLFEVALDQVDDHQASMTSL----EALLRGDRDWDRLLELLRKRLL 600 Query: 147 LQIPATREFAVYSLY--FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 +R+ ++ + R+ A + L+ P A +W Sbjct: 601 YATDRSRQVSLRLEIASILATRLDRSEDALTELEQLLERFPRHLPALHAAENLATRLSQW 660 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + + + +L + ++ D + + + +L+L +A Sbjct: 661 PTLVKLIEAHVAAVQGPRTRALLLHRSANIRARHLSDPEGAVRELVRALELWPQLGVARA 720 Query: 265 CAAKSLISQNKKR 277 + + R Sbjct: 721 LLLRLYEKLGRSR 733 >gi|47207592|emb|CAG02333.1| unnamed protein product [Tetraodon nigroviridis] Length = 502 Score = 44.9 bits (105), Expect = 0.028, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ T V L Y+E C ++ A ++ Sbjct: 187 KILKAECLALLGRYPEAQSVASDILRMDPTNADALYVRGLCLYYEDC----IDKAVQFFV 242 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A ++ + A Sbjct: 243 QALRMAPDHEKARLACRNAKALKAKKEEGNKVFKEGNFEAAFDLYSEALTIDPNNIKTNA 302 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R+ + + + D +++KL + I A + A+ + + +A E + Sbjct: 303 KLYCNRATVGSKLNKLEQAIEDCTKAVKLDETYIKAYLRRAQCYMDTEQYEEAVRDYEHV 362 Query: 287 WKVN 290 ++ Sbjct: 363 YQAE 366 >gi|322701171|gb|EFY92922.1| mitochondrial outer membrane 72Kda protein [Metarhizium acridum CQMa 102] Length = 622 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 5/197 (2%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +S+ A + ++ VY Q + + A + + + + Sbjct: 378 ISLELGEPVKAD--AEFAKALEQDKDDPDVYYHRAQASFIKGDLAEAQKDYQKSIDLDKD 435 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 F+ L ++G + S+ + + P P V + + +S A+ + Sbjct: 436 FIFSHIQLGVTQYKMGSIASSMATFRRCIKNFPKVPDVYNYYGELLLDQSNFSEAVEKFD 495 Query: 213 QKKKNAKEWN--RNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + K+ + LI ++L K D + ++L + +A A+ Sbjct: 496 TAMEMEKQTKPMSMNVLPLINKALALFQWKQDFKEAEQLCQKALIIDPECDIAVATMAQL 555 Query: 270 LISQNKKRKAEVILEKI 286 L+ QNK +A E+ Sbjct: 556 LLQQNKVTEALTYFERA 572 >gi|260101626|ref|ZP_05751863.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] gi|260084559|gb|EEW68679.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075] Length = 415 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 32/264 (12%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNS 172 F E L + +I L + + L ++ + + L ++ G + + Sbjct: 62 FPQEDLFKVYLAEIMLNDGDEDD---GLSLLYGVSKESSAYLDGLLVQADYYQTNGLIET 118 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAILL 229 A+ +AL ++P + + + L+ + +A+ L Q++K E N N+ ++ Sbjct: 119 AKDKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKTFGEVNLNQRLIA 178 Query: 230 IARSLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L N + I H + I+S K +M ++ +A +L++ Sbjct: 179 TNAKLGNYEAAAKIIREHSSSLLDIDS-KYEAGLVMLAV---------GNDDQAIKLLDE 228 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMG 339 + +P +P +A Y H + L+ N E E+L + ++ A + Sbjct: 229 VIDQSPDYVNAYPLLAQAYEH--KHDNEQVLRTVQAGLAYN-ELDETLYSMGARAAANLN 285 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363 +D A +K AP + Sbjct: 286 QLDTAADLLEKGLKKAPDNSELRM 309 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 21/194 (10%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + E + ++ Y A E ++Q T + + R Sbjct: 121 DKLLQALKLAPKEDAIKFGLAELDYLSGNYEQALALYEDLIQRQKT-----FGEVNLNQR 175 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---------LAKEWSRAITFLNQKKKN 217 + N+ A I + +++ +AI L++ Sbjct: 176 LIATNAKLGNYEAAAKIIREHS---SSLLDIDSKYEAGLVMLAVGNDDQAIKLLDEVIDQ 232 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + ++ +L A D ++ + + +L + A++ + N+ Sbjct: 233 SPDYVNAYPLLAQAYE-HKHDNEQVLRTVQAGLAYNELDETLYS---MGARAAANLNQLD 288 Query: 278 KAEVILEKIWKVNP 291 A +LEK K P Sbjct: 289 TAADLLEKGLKKAP 302 >gi|239997060|ref|ZP_04717584.1| TPR domain protein [Alteromonas macleodii ATCC 27126] Length = 592 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 6/141 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 ++ LL + A + E +L + +L + + +L A+ Sbjct: 443 NDIPSAMLLAER--QIGNDRAAAIKTYEQVLTKTPDNFVVLNNLAYLAFEDKNLTRAEEL 500 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---QKKKNAKEWNRNRAILLIARS 233 A KA+ + + + + Q YV + + A+ + + N +L+ Sbjct: 501 AKKAVSLQRENADAVDTLAQIYVAKGDKAAALKLYEEVSARPIANDDVYLNHVSVLLELD 560 Query: 234 LENADKGDMIASYHDAIESLK 254 + +AS E+ K Sbjct: 561 KKALASRK-LASREFKSEAAK 580 >gi|206603461|gb|EDZ39941.1| putative TPR domain-containing protein [Leptospirillum sp. Group II '5-way CG'] Length = 327 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 11/211 (5%) Query: 160 LYFESCRI-GDLN--SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + R D A A+ L+ P + ++ +L + A+ + + Sbjct: 20 LVPQIQRSLEDREWLKAFHLASSMLEKYPSNETLRYLLLDALILGGRYDNALDRVREFLV 79 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 N E +R LL + + + ESL + + A SL + Sbjct: 80 NMPENHRLNLYLLHLLVYHKSFEEALALGKSLLKESLTSMEKRD-VLLHTAFSLHGTGEL 138 Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 RKA +L ++ +P + + + IY + L L E++ ++ Sbjct: 139 RKAVRMLNELLDEDPLNTDALETLGKIYFEQGHFEEAERY--FLELAEMDPAHPRVHQLL 196 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + E G D+A + AM+IAP E+ Sbjct: 197 GLLYSEQGKWDEAIMEWEEAMEIAPSDEVLR 227 >gi|167536099|ref|XP_001749722.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771870|gb|EDQ85531.1| predicted protein [Monosiga brevicollis MX1] Length = 1397 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 90/303 (29%), Gaps = 53/303 (17%) Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATRE---FAVYSLYFESCRIGDLNSAQRYATK--- 179 Q + ++ A E + P R + + R GD++ A + Sbjct: 800 AQQLEFQGNFSRALEHYQTAQTNDPRERVHNDACKAGIARCALRTGDVSRGLALAEEIGS 859 Query: 180 ---------ALDISPDAPWVT---------EAVVQQYVLAKEWSRAITFLNQ------KK 215 AL+ + + + Y+ K W +A L + Sbjct: 860 IKLFTECGAALEATDHFNEAAQCYERANMVDKAAEMYIKTKNWVKAGEMLESVSNTALQL 919 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMI-----ASYHDAIESLKL--CDNSIMASICAAK 268 + AK + + A + E A+ + D E++++ S+ + A Sbjct: 920 QYAKAREASGSYKEAATAYEAANDVVSVVRINLDHLRDPQEAVRVVRASGSVEGAKMVAN 979 Query: 269 SLISQNKKRKAEVILE------KIWK-VNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A L + + H ++ ++Y L + ++I Sbjct: 980 FFQKIGDAPSAIQFLIMSRNADEAYAMAKQHNQL-DLYAEALGDAGTP-----EVYKQIA 1033 Query: 322 KESVE--SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++ + + + L+ G D A + + A + A E + T ++L Sbjct: 1034 EDYDRLGNGLQAGRFFLQAGLYDDAVNRLVQASTEDGEHVELAIRAAGEAGETGLTQRVL 1093 Query: 380 YWT 382 + Sbjct: 1094 DYL 1096 >gi|332665291|ref|YP_004448079.1| hypothetical protein Halhy_3347 [Haliscomenobacter hydrossis DSM 1100] gi|332334105|gb|AEE51206.1| Tetratricopeptide TPR_1 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 460 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 4/131 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R+G +++A+ +AL + P + + + ++W AI F ++ + Sbjct: 278 LRLGRVSTAKPLLMEALRLEPHNDEAFFHLAEVAIAEEQWQLAIHFCSKAIEIDDNREEY 337 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A++ + E GD + + ++ + + A L+ ++ A IL+ Sbjct: 338 HALIAAVYAQE----GDYELAEEHYDRATEIAPEDVSLWLQYAVLLMETDRAEAALEILD 393 Query: 285 KIWKVNPHPEI 295 + PE+ Sbjct: 394 IAEESAVGPEL 404 >gi|297569822|ref|YP_003691166.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2] gi|296925737|gb|ADH86547.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio alkaliphilus AHT2] Length = 460 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 54/124 (43%), Gaps = 10/124 (8%) Query: 258 NSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL--LSENTVGKL 311 S+ A+ + + + ++++ + +A +L ++ +P HPEI + S T + Sbjct: 43 GSLPAAADPVLSGRQMLAEQRYDEAYELLLTAFRADPGHPEINFLLGRAAFESGRTEEAV 102 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF----LLLAQI 367 R+ N E+ + + +++ L +GS + A + P + ++ LA + Sbjct: 103 MAYERVLLHNPEANRAKLELARSYLRLGSRELARQYFHEVLATNPPEPVWQNIQRFLAAM 162 Query: 368 EQAN 371 + A Sbjct: 163 DAAE 166 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 7/98 (7%) Query: 97 AHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIP 150 + LA + + + + L + A + A E +L P Sbjct: 54 SGRQMLAEQRYDEAYELLLTAFRADPGHPEINFLLGRAAFESGRTEEAVMAYERVLLHNP 113 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + L R+G A++Y + L +P P Sbjct: 114 EANRAKLE-LARSYLRLGSRELARQYFHEVLATNPPEP 150 >gi|262305023|gb|ACY45104.1| acetylglucosaminyl-transferase [Polyzonium germanicum] Length = 284 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 +P A + ++ Q H + L L I + A + + P A Sbjct: 34 GQVPDAEECYNTALQLSPTHADSLNNL--ANIKREQGFTEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLTDALLHYKEAIRIQPSFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPSF----ADAHSNLASIHKDSGNIPEAITSYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVPDAEECYNTALQLSPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K A + ++ ++ P A+ Sbjct: 66 EQGFTEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTDALLHYKEAIRIQ--PSFAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPSFADAHSNLASIHKDSGNIPEAITSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|195336539|ref|XP_002034893.1| GM14398 [Drosophila sechellia] gi|194127986|gb|EDW50029.1| GM14398 [Drosophila sechellia] Length = 1152 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 93/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + + A I K + + A+I Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLSAYGTASSILRDKAKYEIPAEI 453 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 73/240 (30%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D ++ Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLS 432 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A+ LE Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKRTLESA--------------- 477 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A + + + ES ++++ M S D A +K P Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528 >gi|307324487|ref|ZP_07603694.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family [Streptomyces violaceusniger Tu 4113] gi|306889731|gb|EFN20710.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family [Streptomyces violaceusniger Tu 4113] Length = 936 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 22/204 (10%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R GDL A A A+ W + ++Q + A+ L Q + Sbjct: 618 ALRQGDLQVAAHQARTAMSRISVQGWGVGIGLLLSTLIQAETGMGHYDEAMALLEQPLPD 677 Query: 218 -------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKS 269 + R R +A A GD A+ +++ ++ + AA++ Sbjct: 678 ELFQTLPGLFYLRARGRCHLATGRYQAALGDFTAAGE-VMDAWRMDMPLLTPWRLDAAET 736 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ ++A + E+ ++ P A + ++ ++ R EI +E Sbjct: 737 WLALGDPKRARALAEEQLRLGPEDARLRGALLVVLARTDELKRRVPRLKEAVEI----LE 792 Query: 327 SLVIVSKIALEMGSIDQAHAKAML 350 ++A+ +G + +A+ Sbjct: 793 GGDDRIQLAIALGELGRAYRSLGD 816 >gi|300866689|ref|ZP_07111373.1| putative (Heparan sulfate)-glucosamine 3-sulfotransferase 1 [Oscillatoria sp. PCC 6506] gi|300335289|emb|CBN56533.1| putative (Heparan sulfate)-glucosamine 3-sulfotransferase 1 [Oscillatoria sp. PCC 6506] Length = 398 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 50/135 (37%), Gaps = 5/135 (3%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G L A + KA++I+PD+P + + + AI + + A Sbjct: 15 EGKLEEAIAHYRKAVEINPDSPLAYHNLGKALQQNGQLEDAIAAQQKAIILQPNFT--PA 72 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + + + +++ + + + A +L Q K +A + + Sbjct: 73 YFPLRYAPLPNNSSLIDDLIALYRQVIEILPDFPLVYVHLAAALTKQGKIEEAIAVYQTA 132 Query: 287 -WKVN--PHPEIANI 298 +K HPE+A + Sbjct: 133 VYKQTLVSHPELAQV 147 >gi|302765547|ref|XP_002966194.1| peptide-N-acetylglucosaminyltransferase [Selaginella moellendorffii] gi|300165614|gb|EFJ32221.1| peptide-N-acetylglucosaminyltransferase [Selaginella moellendorffii] Length = 985 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 83/273 (30%), Gaps = 33/273 (12%) Query: 101 PLARKMHSYVSQQHTFH-NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA--- 156 A H+ + L LL+ Q A+ ++I T A Sbjct: 181 AAACCRHALTLNPRLVDAHSNLGNLLKAQ-----GLAPHAYYCYAEAIRIQPTFAIAWSN 235 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L E+ GD A Y +A+ + P+ + A+ L + ++ Sbjct: 236 LAGLLMEA---GDYERALAYYQEAIRLKPNFADAHLNL----------GNALKNLGKAQE 282 Query: 217 NAKEWNRN------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + R AI + ++G + + +++ L + I A +L Sbjct: 283 SIVCYLRAIQLRPDYAIAYGNLASVYYEQGQLDQAILHYHKAIMLDSSFIEAYNNLGNAL 342 Query: 271 ISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESV 325 + +A + + HP+ + NIY + +A + Sbjct: 343 KDAGRVDEAIACYQHCLTLQANHPQALTNLGNIYMEWNMISMAANFYKATLNVTTGLSAP 402 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 S + G +A A ++I P Sbjct: 403 YSNLATIYKQQAKGHYAEAIACYNEVLRIDPTA 435 >gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT 9303] gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT 9303] Length = 733 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 13/168 (7%) Query: 133 ERQYNIAHEKL-EMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + A + +L P A+ +L G+++ A KAL+I D P Sbjct: 231 QGDIETAINYFNKALLLKWNYPE----ALNNLGIAFKAKGEISPAINSWRKALEIKTDFP 286 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 V + Y+ AI F + + + A+ + SL+ +KG++ A+ Sbjct: 287 EVYYNLGSIYLDQGNIETAINFFKKALILKENYP--EALNNLGNSLQ--EKGELDAAIAA 342 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 ++L + A +Q + I +K ++P HPEI Sbjct: 343 YKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKALALHPDHPEI 390 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 18/143 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + + NI A + E L L + + + A + L Sbjct: 293 GSIYLDQGNIETAINFFKKALILKENYPEALNNL--GNSLQEKGELDAAIAAYKKALNHK 350 Query: 151 ATREFAVYSLYFESC--------RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + Y E+ GDL ++ R KAL + PD P + + Sbjct: 351 PS--------YREAQNNLGCVYRAQGDLENSIRIFKKALALHPDHPEILSNLGTSLEEKG 402 Query: 203 EWSRAITFLNQKKKNAKEWNRNR 225 + AI+ N N + Sbjct: 403 DLEAAISSFNNAISNNSNYPTAH 425 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 48/285 (16%), Positives = 94/285 (32%), Gaps = 27/285 (9%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A+ + N+A + + P E Y+L F GD+ +A Y KAL + + Sbjct: 193 ALQAKGEKNLAISSFIKALEIKPEFPEA-CYNLGFIYLNQGDIETAINYFNKALLLKWNY 251 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P + + E S AI + + ++ + D+G++ + + Sbjct: 252 PEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPE----VYYNLGSIYLDQGNIETAIN 307 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHL 302 ++L L +N A SL + + A +K P + +Y Sbjct: 308 FFKKALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRA- 366 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKE 359 + ++ + ++ + E L + E G ++ A + A+ P Sbjct: 367 -QGDLENSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTAH 425 Query: 360 IFLLLAQIEQANSHNTDKILYWTQS----------ALHAMPDPLW 394 L L + + + HN + W AL P W Sbjct: 426 YNLSLCLLSKGDYHNGWQQHEWRWKNWEKNGGNSGALTTTR-PTW 469 >gi|28574254|ref|NP_788449.1| CG2469, isoform B [Drosophila melanogaster] gi|28574256|ref|NP_788448.1| CG2469, isoform A [Drosophila melanogaster] gi|7292059|gb|AAF47472.1| CG2469, isoform B [Drosophila melanogaster] gi|17862386|gb|AAL39670.1| LD24034p [Drosophila melanogaster] gi|23092752|gb|AAN11469.1| CG2469, isoform A [Drosophila melanogaster] gi|220947488|gb|ACL86287.1| CG2469-PA [synthetic construct] Length = 1150 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 93/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + + A I K + + A+I Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLSAYGTASSILRDKAKYEIPAEI 453 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 74/240 (30%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D ++ Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLS 432 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A++ LE Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKLTLESA--------------- 477 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A + + + ES ++++ M S D A +K P Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528 >gi|50293839|ref|XP_449331.1| hypothetical protein [Candida glabrata CBS 138] gi|49528644|emb|CAG62305.1| unnamed protein product [Candida glabrata] Length = 600 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 11/169 (6%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q+ + Y A E + + F L + R + ++ +A P Sbjct: 386 RGQMYFITQNYEKAGEDFKKSKESDPKNIFPYIQLACLAYRENKMAECEKLFEEARKTFP 445 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLN--------QKKKNAKEWNRNRAILLIARSLENA 237 AP V + + A+ N QK+ + ++AR Sbjct: 446 TAPEVPNFYAEILADKGDIDEAVKQYNIAYRLESLQKQIHVGIAPLVGKATILARQPTPE 505 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + DA ++ S A + A+ + Q K +A + E+ Sbjct: 506 NFATISQLLEDACKA---DPRSEQAKVGLAQLRLQQEKVDEAIELFEEA 551 >gi|71276296|ref|ZP_00652574.1| TPR repeat [Xylella fastidiosa Dixon] gi|71900307|ref|ZP_00682443.1| TPR repeat [Xylella fastidiosa Ann-1] gi|71162904|gb|EAO12628.1| TPR repeat [Xylella fastidiosa Dixon] gi|71729955|gb|EAO32050.1| TPR repeat [Xylella fastidiosa Ann-1] Length = 690 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 12/227 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G L+ A++ + A I D P + + + +A+ L+Q + E Sbjct: 110 AIARGALDEAEQLSRTAARIISDHPQLLAVNATIALRRGQVDQALAMLSQAVELLPE--- 166 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L + KG + + ++L + I A+ Q + A IL Sbjct: 167 -EPGVLFSLGFAYLQKGHIAFAERAFQRVIELNPHVIPVRALIAQLAQRQGRLDDALRIL 225 Query: 284 EKIWKVNP--HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 E+ + P + + LL+ N L ++ E +L + ++ Sbjct: 226 EEALSLTEGDTPALHRLTGEFELLAGNPDRALPHLRQVLVTWPEDPRTLEALLTAWKQLD 285 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD---KILYWTQ 383 D A A+ I PR L A++ A + + I W Sbjct: 286 MDDDARVTLDAALDIKPRNHDLWL-ARLAVAPVGSDEARIVIERWLS 331 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 98/296 (33%), Gaps = 32/296 (10%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ + A M S E V L + A + ++++ Sbjct: 143 IALRRGQVDQALAMLSQAV--ELLPEEPGVLFSLGFAYLQKGHIAFAERAFQRVIELNP- 199 Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWSRAITF 210 V +L + + R G L+ A R +AL + D P + + +LA RA+ Sbjct: 200 HVIPVRALIAQLAQRQGRLDDALRILEEALSLTEGDTPALHRLTGEFELLAGNPDRALPH 259 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L Q E R LL A + D D + A++ + A+ Sbjct: 260 LRQVLVTWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKPRNHDL-----WLARLA 313 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESL 328 ++ +A +++E+ + + E+ L ++ + + E+ Sbjct: 314 VAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQNNPEAA 356 Query: 329 VIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 V++ +A+E G + ++ P + L IE H + W Sbjct: 357 ETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVTCLQQLIESVPEHERTILRPWL 412 >gi|332084025|gb|EGI89232.1| cellulose synthase operon protein C [Shigella dysenteriae 155-74] Length = 453 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 71/194 (36%), Gaps = 5/194 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 253 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 312 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ I L+ ++ + + + L ++ ++G Sbjct: 313 GNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 372 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ +A+ ++ + + P+ PE Y Sbjct: 373 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYG 432 Query: 301 HLLSENTVGKLKRA 314 LS + + RA Sbjct: 433 LYLSGHNQDRAARA 446 >gi|239996200|ref|ZP_04716724.1| Thioredoxin domain-containing protein [Alteromonas macleodii ATCC 27126] Length = 289 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 11/148 (7%) Query: 140 HEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 +++ ML P A ++ + GD A A +AL ++PD ++ Sbjct: 106 EQQIREMLAKYLPNPEDDLLATAG---KAIQQGDYAEALPAAKEALALNPDNVNAKYMLI 162 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Y+ A L + K + +R +++ E A I A+E+ Sbjct: 163 DCYIETGSIDTAKALLEE-IKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVIL 283 + A L NK + A +L Sbjct: 222 DLQL---KVDLAVQLQQANKAQDALELL 246 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 3/104 (2%) Query: 291 PHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+PE +A + + L A +N ++V + ++ +E GSID A A Sbjct: 118 PNPEDDLLATAGKAIQQGDYAEALPAAKEALALNPDNVNAKYMLIDCYIETGSIDTAKAL 177 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +IE A + Q+A+ A PD Sbjct: 178 LEEIKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221 Score = 36.8 bits (84), Expect = 9.0, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 15/110 (13%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+A + + +GD + A E+L L +++ A I A+ +LE+I Sbjct: 124 LLATAGKAIQQGDYAEALPAAKEALALNPDNVNAKYMLIDCYIETGSIDTAKALLEEI-- 181 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ L + L E ++ E + + A+E Sbjct: 182 -----------KLVDQDSRYKSLAGKIELAEQAADTPEIRQL--QAAVEA 218 >gi|170691429|ref|ZP_02882594.1| TPR repeat-containing protein [Burkholderia graminis C4D1M] gi|170143634|gb|EDT11797.1| TPR repeat-containing protein [Burkholderia graminis C4D1M] Length = 469 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 58/196 (29%), Gaps = 22/196 (11%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 AA + +H + V+ L QI + ++ A Sbjct: 7 AASDNSNISSLHDQALAAYRAGRHDTVHALAAQILTLDGEHTGAMH-------------- 52 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L + G AQ + +A+++ P+A + + + + A+ L + Sbjct: 53 -LEGLL--ALAAGQPEVAQHWIERAIELGPEAN-LYNTLYAIQLRLGDHDGAVDSLRKGL 108 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 E+ L +L + ++K+ A + Sbjct: 109 ALQPEF----TALHYNLALTLQHLDRPEDAAVSYRRTIKIEPGHSAAHNNLGRIFADLGA 164 Query: 276 KRKAEVILEKIWKVNP 291 ++AE + ++ P Sbjct: 165 LQEAEHHYRRALELAP 180 >gi|86139022|ref|ZP_01057593.1| TPR domain protein [Roseobacter sp. MED193] gi|85824253|gb|EAQ44457.1| TPR domain protein [Roseobacter sp. MED193] Length = 580 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 4/204 (1%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L ++ + LL ++ +Y ++ + + Sbjct: 270 LAAVMNGEAANDFVLMYARVASALSPQHVDAVLLSAELLDQLGRYELSIATYKQVPSDHP 329 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A R ++A + + P P V+ ++ ++++ AI+ Sbjct: 330 EYYAAEMGRAEALRRAAKPDAAAEVLEQLVGDFPTLPQVSISLGDLLRQQEDYAGAISAY 389 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + N + +R+R L AR + D + D SL L +S SLI Sbjct: 390 DAALSNMSDDSRSRWFLHYARGISYERLKDWPKAEADFRASLALRPDSPQVLNYLGYSLI 449 Query: 272 SQ----NKKRKAEVILEKIWKVNP 291 + +K +A ++E+ P Sbjct: 450 EKEDSPDKLDEALGMIEQAVAAQP 473 >gi|297843222|ref|XP_002889492.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335334|gb|EFH65751.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 360 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 22/148 (14%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 K +S AI + + +IL RS N G+ + DA ES++LC Sbjct: 43 RKGKKHYSEAIDCYTKAINQGVLSDSETSILFSNRSHVNLLLGNYRRALTDAEESMRLCP 102 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 +++ A AAK+ +S + +A+ EK + ++ + +K+ L+L Sbjct: 103 HNVKAVYRAAKASMSLDLLNEAKSYCEK---------------GIENDPSNEDMKKLLKL 147 Query: 318 EEINKESVESL-------VIVSKIALEM 338 K+ E V+ +K L Sbjct: 148 VNSKKQEKEQHEAQVSRAVVEAKACLSA 175 >gi|295675407|ref|YP_003603931.1| Tetratricopeptide TPR_4 [Burkholderia sp. CCGE1002] gi|295435250|gb|ADG14420.1| Tetratricopeptide TPR_4 [Burkholderia sp. CCGE1002] Length = 613 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 93/247 (37%), Gaps = 11/247 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180 +L +IAL Q A++ + + A + + + D +A + Sbjct: 87 QVLAAEIALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQ-- 144 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 +P + + VL+ + A L+Q+ E NR AIL + L Sbjct: 145 -QYAPGSERAAQLDASLLVLSGKPDDAAPILSQELAKVPEENRGSAILALQLLLS--RGP 201 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANI 298 + + H E LK N A + A+ + + A LE+ + P P A + Sbjct: 202 NRVGGLHVLQELLKNDMNRPEAQLAVARQQLLADDAPGARKSLEQALTIKPDYLPA-ALV 260 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + E + + + N +S ++ + ++++ L +D A + + M+ A Sbjct: 261 LSQMGPEERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRLDDAQKQFEI-MRKANAN 319 Query: 359 EIFLLLA 365 ++ L+A Sbjct: 320 DLTPLMA 326 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 12/165 (7%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A +L D +A+ + S A+ A L+ K Sbjct: 111 ARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQQ---YAPGSERAAQLDASLLVLSGKP 167 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331 A IL + P + L N VG L L + + E+ + V Sbjct: 168 DDAAPILSQELAKVPEENRGSAILALQLLLSRGPNRVGGLHVLQELLKNDMNRPEAQLAV 227 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANS 372 ++ L A A+ I P + + E+ Sbjct: 228 ARQQLLADDAPGARKSLEQALTIKPDYLPAALVLSQMGPEERKEG 272 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 86/253 (33%), Gaps = 30/253 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ----RYA 177 L Q+ LA + + A ++ E+M + A + +L + +L AQ +YA Sbjct: 289 ARLALAQMYLASDRLDDAQKQFEIMRKANANDLTPLMALALIKIQQKNLPEAQTYLIQYA 348 Query: 178 TKALDISPDAPWVTEAVVQQ---------YVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 +A + +P A +A + A +W I+ ++ Sbjct: 349 QQA-EKTPGAD-AGQAYIYLAQLALEQKNEGAAGDWLNKIS----------PASQQYLAA 396 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIW 287 I R+ A +G + + + + A L + +AE L++ Sbjct: 397 QITRAQLLAKQGKTDEARQLLANLQTADPRDVALIARTDAAILFDAKRYPEAEARLQQAT 456 Query: 288 KVNP-HPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVS-KIALEMGSIDQ 343 P P++ Y + + + +L + ++ ++ + +A + + Sbjct: 457 ANFPDDPDLTYDYAMAAEKTGHYDVMEAQLRKLIQTQPDNPQAYNALGYSLADRNQRLPE 516 Query: 344 AHAKAMLAMKIAP 356 A A +AP Sbjct: 517 ADKLVEKASALAP 529 >gi|209524929|ref|ZP_03273474.1| serine/threonine protein kinase with TPR repeats [Arthrospira maxima CS-328] gi|209494578|gb|EDZ94888.1| serine/threonine protein kinase with TPR repeats [Arthrospira maxima CS-328] Length = 790 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 47/329 (14%), Positives = 104/329 (31%), Gaps = 42/329 (12%) Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102 L+ L FL + L+ R PA +G + L G N Sbjct: 359 AALAGLLVFLGLFELVVPTFR-----PAYYVR--------RGNQLLNDG-------NTED 398 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSL 160 AR M + + ++ +A +++ A + + P + Sbjct: 399 ARNMFVRAT-EIQPNHAAAWAGQADALAEL-GRHDRALVDYQKALELDPDNSDVLTSKGT 456 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKK 216 + G+ A +A+ I P+ A++ + A++ Q K Sbjct: 457 LL--YQTGEPQKALDAHEQAIAIDPNNARAWHGKGIALIGLQ----RYDEAVSAFEQAKT 510 Query: 217 NAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 ++A+ L + + + L+ + L Sbjct: 511 IRPSAPSVWQSKALALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL 570 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE-SVESLVIV- 331 + +A +K ++NP A + + + +G+ + A+R+ + E ES + Sbjct: 571 GRHEQALESYQKALEINPQHFQALLQKGNVLFSPLGRTEEAVRISDRAIEVQPESHLAWH 630 Query: 332 SKIALEM---GSIDQAHAKAMLAMKIAPR 357 ++ ++ G + A A A+++ P Sbjct: 631 NRGSILAGGRGDFEGAIAAYDRAIELRPS 659 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 49/147 (33%), Gaps = 24/147 (16%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVY--SLYF----ESCRIGDLNS--------AQRYATK 179 + A + +++ + A+ ++ R S A + Sbjct: 641 GDFEGAIAAYDRAIELRPSFVPALRDRGFALSQWSQALRAEGNTSMANAKINEALESFDR 700 Query: 180 ALDISPDAPWVTEAVVQQYVL---AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 AL+I+P+ +++V + + + ++ ++ + E ++L+ R L Sbjct: 701 ALNINPND---HQSLVGRAIAFSHQGRYDESLNAFDKAQ----EIQPQDPLILVNRGLVL 753 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMAS 263 G + E+LK+ A Sbjct: 754 ERMGRYNEAIDAYDEALKIQPGFPPAV 780 Score = 36.8 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 58/254 (22%) Query: 126 EVQIALAERQYNIAHEKLEM--------MLQIPATREFAV-YSLYFESCRIGDLNSAQRY 176 + + + A + + + P E V G A Sbjct: 522 KALALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL--GRHEQALES 579 Query: 177 ATKALDISPDAPWVTEAVVQ----QYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILL 229 KAL+I+P +A++Q + A+ ++ + E + NR +L Sbjct: 580 YQKALEINPQH---FQALLQKGNVLFSPLGRTEEAVRISDRAIEVQPESHLAWHNRGSIL 636 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMA------SICA-AKSLISQNKKRKAEVI 282 + D IA+Y AIE L + + A ++ +++L ++ A Sbjct: 637 ---AGGRGDFEGAIAAYDRAIE---LRPSFVPALRDRGFALSQWSQALRAEGNTSMANAK 690 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + + L+ R IN +SLV + G D Sbjct: 691 INEA------------------------LESFDRALNINPNDHQSLVGRAIAFSHQGRYD 726 Query: 343 QAHAKAMLAMKIAP 356 ++ A +I P Sbjct: 727 ESLNAFDKAQEIQP 740 >gi|153872083|ref|ZP_02001078.1| TPR domain containing protein [Beggiatoa sp. PS] gi|152071452|gb|EDN68923.1| TPR domain containing protein [Beggiatoa sp. PS] Length = 558 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 84/243 (34%), Gaps = 7/243 (2%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 EY+ L IA +A + Q + A + + + + A Sbjct: 12 QQEYMYKALIADIARLRGNNILATAYFLDIAQKARHEQVAERA-TQVAWQAKQYDQAIEA 70 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A + ++P+ P + + Q + + AI L+ KE + + ++ A + Sbjct: 71 ARLWVTLAPNNPKARQFLGQFLLQQQRTEEAIEHLDVWLNTFKEEPQKQRNIIEALLEQQ 130 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 AD+ +++ + + + ++ L++ N KA+ +L + P E A Sbjct: 131 ADQDEVLELMEKLVAKQPNDPARL---LIYSRLLLNANDIEKAQNVLRTLLASIPDHEQA 187 Query: 297 ---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 Y+ L+ + + + + +++ E D+A + L + Sbjct: 188 VPLYAYSLEKQNQPQMALQWMKDVLSQYPDKWDWRFMYARMLTEKEQHDKAIEQFQLLLS 247 Query: 354 IAP 356 P Sbjct: 248 QYP 250 >gi|13475586|ref|NP_107150.1| O-linked GlcNAc transferase [Mesorhizobium loti MAFF303099] gi|14026338|dbj|BAB52936.1| mlr6692 [Mesorhizobium loti MAFF303099] Length = 580 Score = 44.9 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 M+I ++P AR + V + E L L+ ++AL E Y A + + +L I Sbjct: 245 MAIWQGDVPSARALVDDVLASSPDNVEALD--LDAKVALLEADYTRAGQSFQRVLAIDPR 302 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A+ + GD ++A++ +AL I P + + + + Sbjct: 303 NAEALVGIGDVRRAQGDDDAARQAYREALAIEPGSSDIEQRL 344 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 88/298 (29%), Gaps = 18/298 (6%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLY 161 A + + + LV L A A + L + T + A + L Sbjct: 48 AVDLLRRALALKPDNADALVQL---GFAELGRNDLAAARDAFSKALSLAPTYQDASFGLA 104 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-----QYVLAKEWSRAITFLNQKKK 216 R G+L++A A P A+V+ E +A + K Sbjct: 105 EIEFRSGNLDAALPLAESVARAQPGNTDAA-ALVENIRKAMQAAGGEARKASVAAPRAKP 163 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 L+ + G + + +L L + + + S + Sbjct: 164 RPDPV-----AGLMEQGRRLRTAGKLPEAEKVYRRALGLAPKNTDILVALGLIVGSSQRF 218 Query: 277 RKAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 +A ++ + P I I + + + + ++VE+L + +K Sbjct: 219 DEAGHFFDRALAIKPGLLDARIGKIRMAIWQGDVPSARALVDDVLASSPDNVEALDLDAK 278 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +AL +A + I PR L+ + + D + AL P Sbjct: 279 VALLEADYTRAGQSFQRVLAIDPRNAEALVGIGDVRRAQGDDDAARQAYREALAIEPG 336 >gi|330823572|ref|YP_004386875.1| tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans K601] gi|329308944|gb|AEB83359.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans K601] Length = 593 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 14/205 (6%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y A + + A + + + D + A +L Sbjct: 170 LYARAGDKALAARVVRLALEEELNNPATGPMAWTTVGRMYLAADDKARALEAAGNALAQN 229 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT--VGKLKRA 314 A++ + + L +N +AE +L + P PE+ Y +L E+ + Sbjct: 230 PGDDGAAMLSLQLL--ENAVPEAEALLSRYLAGKPLPEVRMAYARVLLESQRLADAQAQV 287 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAP----RKEIFL---LL 364 + ++ ++ +I + + L+ G +DQA A ++ P R+ L+ Sbjct: 288 DAVTREQPDNAQAWLIRASLQLQAGELDQAEAALQRCTQLLEQDPATEQRQRALTQIYLM 347 Query: 365 AQIEQANSHNTDKILYWTQSALHAM 389 + + W A Sbjct: 348 QSQIAEKRGDLAQAQAWLARIDDAE 372 >gi|262305017|gb|ACY45101.1| acetylglucosaminyl-transferase [Nicoletia meinerti] Length = 289 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GQVVEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|195014701|ref|XP_001984064.1| GH15212 [Drosophila grimshawi] gi|193897546|gb|EDV96412.1| GH15212 [Drosophila grimshawi] Length = 1192 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 166 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNAEKAKLAFERA 223 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 224 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 282 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 283 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 337 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 338 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 397 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + A I K + + A+I Sbjct: 398 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 452 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 312 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 371 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D + Sbjct: 372 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 431 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A+ LE Sbjct: 432 AYGTASSILRDKAKYEIPAEIQNNVASLYYRLGNLKMAKHTLESA--------------- 476 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A + + + ES ++++ M S D A +K P Sbjct: 477 ---------LKHASSEMDKDVKYYESIQVTMKYNLARLNEAMSSFDVADKLYKEILKEHP 527 >gi|148556045|ref|YP_001263627.1| sulfotransferase [Sphingomonas wittichii RW1] gi|148501235|gb|ABQ69489.1| sulfotransferase [Sphingomonas wittichii RW1] Length = 625 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 71/233 (30%), Gaps = 25/233 (10%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A + L + A+ + +CR GDL +AL ++P Sbjct: 20 LPGARAAAEQILRSLPADQP--LLALAGML--ACRTGDLPGGIARLREALKLAPGDQSTR 75 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +V+ + A +++ K +L + +G + + D Sbjct: 76 NNLVRALIETGALDEAAEACAGGERDPK--------MLRLSAYIEHQRGHLDRAVADYEA 127 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL--------L 303 + + + + +AE L + P+IA Y +L Sbjct: 128 VVAALPDDFESWNNLGNLYAATGHGERAEAPLRTAIALR--PDIALPYLNLAKLLAGLQR 185 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E+ L+ A ++ E + +G+ D A A+ ++P Sbjct: 186 PEDGAELLRAAAAAI---PDNAEIRAELGLAEAALGAFDAAERAYRAAIDLSP 235 >gi|291614670|ref|YP_003524827.1| hypothetical protein Slit_2212 [Sideroxydans lithotrophicus ES-1] gi|291584782|gb|ADE12440.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1] Length = 484 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 19/186 (10%) Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 W+ + L +A++ + A + A+ AIE KL + Sbjct: 21 WALSGLVLAAGMAHAQDAINQNERIKTAAAAGTAESTQ----QSAAIERQKLLQD----- 71 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEI 320 A +LI K + A ++LE + P + L S + R+ + Sbjct: 72 ---AANLIKSGKSKDAYLLLEPEQSIRAGDPDYDYLLGIAALDSGKPNEAIFALERVLAV 128 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP----RKEIFLLLAQIEQANSHNTD 376 +++ +++ L +G A + P I L I Q Sbjct: 129 RPNHLQARAEIARAYLAVGEKAAAKQEFETVQSQNPPKEVNATIQRFLDAINQGQGGEAT 188 Query: 377 KILYWT 382 + + Sbjct: 189 MLSGYL 194 >gi|269213822|ref|ZP_05982924.2| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685] gi|269145457|gb|EEZ71875.1| tetratricopeptide repeat protein [Neisseria cinerea ATCC 14685] Length = 402 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 111/348 (31%), Gaps = 51/348 (14%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155 AR++ + QQ ++ L ++ + + A + +L P T R Sbjct: 70 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHQTLLDSPDTTGAKRAR 126 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ L G ++ A++ L + A + ++ Y ++W +AI Sbjct: 127 VLFELAQNYQSAGLVDRAEQIF---LSLQDGEMAREARQHLLNIYQQDRDWEKAIETAQL 183 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAKSL 270 + + + + + + K + + A+E+ K C A++ Sbjct: 184 LSHDEQTYQFEISQFYCELAQASLFKSNFDVARFNVGKALEANKRC---TRANMILGDIE 240 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIA-------NIYTH-LLSENTVGKL----KRALRLE 318 Q A V + H ++ + Y E + +L + L+ Sbjct: 241 YRQGNF-PASVEAYAAVEQQNHAYLSMVGEKLYDAYAAQGKPEEGLNRLIGYMQTFPELD 299 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL-AQIEQANS---H 373 IN +SL++ + +A A+ ++ P ++ LL +I + Sbjct: 300 LINVVYEKSLLLRGE--------KEAAQTAIELVRRKPDLNGVYRLLGLRISDMDPTWKA 351 Query: 374 NTDKILYWTQSALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 + D + L ++ + + S W P F Sbjct: 352 DADMMRSVVGRQLQ--RSVMYRCRNCHFKSQVFFWH--CPACSKWQTF 395 >gi|260793011|ref|XP_002591507.1| hypothetical protein BRAFLDRAFT_105273 [Branchiostoma floridae] gi|229276713|gb|EEN47518.1| hypothetical protein BRAFLDRAFT_105273 [Branchiostoma floridae] Length = 921 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 72/243 (29%), Gaps = 45/243 (18%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPAT----- 152 A + + NE + L ++ AL Y A E +Q Sbjct: 420 EYRKAIGYYKDALTEVEDDNEKITLLHDLGYALCSVGDYENAIIHFEDAVQKREAIQCNV 479 Query: 153 --REFA-VYSLYFESCRIGDLNSAQRYATKALDI----------SPDAPWVTEAVVQQYV 199 +Y L +G + A Y +AL + PD EA+ + Y Sbjct: 480 TPDFAGSLYLLGKAWANLGHYSKAIGYYDQALQMYRGLGDQDTQHPDIAASLEALGEAYS 539 Query: 200 LAKEWSRAITFLNQKKK--------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ R+ + + Q + A + A L + GD + + Sbjct: 540 HIGDYRRSFSNIEQAMEMFMNVYGEAAFRAHPRIATCLGSLGGVLLSLGDYQKALRYFKK 599 Query: 252 SLKLC----------DNSIMASICAAKSLISQNKKRKAEVILEKIWK--------VNPHP 293 +L++ A + A S RKA E+ + PHP Sbjct: 600 ALQMERSIYGQSTAHPKIATALLNLATSWGKLGDHRKAIDYTEQALQMLRSIHGMTTPHP 659 Query: 294 EIA 296 +IA Sbjct: 660 DIA 662 >gi|187934372|ref|YP_001886178.1| tetratricopeptide repeat domain protein [Clostridium botulinum B str. Eklund 17B] gi|187722525|gb|ACD23746.1| tetratricopeptide repeat domain protein [Clostridium botulinum B str. Eklund 17B] Length = 359 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 27/83 (32%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 I E+ YN A E +L A+ L G+ A KA D +P Sbjct: 245 ANILRREKDYNSARENFNTVLNKENDNAGALRGLAIVEMLEGNKEEGVSLAKKAYDANPQ 304 Query: 187 APWVTEAVVQQYVLAKEWSRAIT 209 +V E ++ + A Sbjct: 305 ETYVLETLIIALTENGQGDEAEK 327 >gi|162457641|ref|YP_001620008.1| cellulose synthase 1 operon protein C precursor [Sorangium cellulosum 'So ce 56'] gi|161168223|emb|CAN99528.1| Cellulose synthase 1 operon protein C precursor [Sorangium cellulosum 'So ce 56'] Length = 2239 Score = 44.9 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 55/196 (28%), Gaps = 4/196 (2%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL---EMMLQIP-ATREFAVY 158 AR + L + A L + P R + Sbjct: 1011 ARAVEEIEKILAIDPERRAAILALQRNAARAGDAQRLARALCAEAELTSSPREQRRLLLR 1070 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + R+GD + A +AL I P P A V+ A + A L + + Sbjct: 1071 AADVTELRLGDRDRASSLVDRALAIDPADPDALRARVRLDERAGRYEEARRALLKLIQRD 1130 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + ++ L L+ ++ E+ + + I A+ L K Sbjct: 1131 PAGDAAFSLWLEVAGLDERRLKRPHSAVESYREAARKRPAHPLPRIEIARLLRETGNYEK 1190 Query: 279 AEVILEKIWKVNPHPE 294 +L + P+ Sbjct: 1191 LVEVLSSLADEAQRPD 1206 >gi|270635416|ref|ZP_06222086.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae HK1212] gi|270317407|gb|EFA28919.1| predicted N-acetylglucosaminyl transferase [Haemophilus influenzae HK1212] Length = 142 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 39/102 (38%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + ++ Y KEW +A+ + K + N ++ + + Sbjct: 26 ALQQLLVIYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVL 85 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++L + + AS+ A + + ++A ILE + + NP Sbjct: 86 QKALSVSPTCVRASLLLANLAMLDGQYQQAVKILENVLEQNP 127 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 7/96 (7%) Query: 269 SLISQNKKRKAEVILEKIWKVNPHP---EIANIYTH----LLSENTVGKLKRALRLEEIN 321 + +KA I EK+ K+ P E+A Y L E+ V K + ++ Sbjct: 33 IYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVS 92 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 V + ++++ +A+ G QA ++ P Sbjct: 93 PTCVRASLLLANLAMLDGQYQQAVKILENVLEQNPD 128 >gi|254475223|ref|ZP_05088609.1| tetratricopeptide TPR_2 [Ruegeria sp. R11] gi|214029466|gb|EEB70301.1| tetratricopeptide TPR_2 [Ruegeria sp. R11] Length = 657 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R+GD A +AL ++P P A+ Q YV EW A+ L+Q + Sbjct: 327 ERLGDEKQAIENYHRALQLNPHLPEAHNALAQYYVRQGEWENALAHLDQAVFTVPTRAKA 386 Query: 225 RAILLIARSLENADKGDMIASYHD 248 A + R+ + G+ A++ + Sbjct: 387 -ASVAGWRANVLFNMGEGSAAFRE 409 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 44/140 (31%), Gaps = 20/140 (14%) Query: 272 SQNKKRKAEVILEKIW-----------KVNPHPEIANIYTHLLSEN-TVGKLKRALRLEE 319 + ++R+A+V LE H + Y L E + RAL+L Sbjct: 288 ALGREREAKVALEAALLEPTFANSSELASQCHKNLGTSYERLGDEKQAIENYHRALQL-- 345 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR----KEIFLLLAQIEQANSHNT 375 N E+ +++ + G + A A A+ P + A + + Sbjct: 346 -NPHLPEAHNALAQYYVRQGEWENALAHLDQAVFTVPTRAKAASVAGWRANVLFNMGEGS 404 Query: 376 DKILYWTQSALHAMPDPLWI 395 A +P WI Sbjct: 405 AAFREINALLAQADYEP-WI 423 >gi|213404832|ref|XP_002173188.1| anaphase-promoting complex subunit Apc3 [Schizosaccharomyces japonicus yFS275] gi|212001235|gb|EEB06895.1| anaphase-promoting complex subunit Apc3 [Schizosaccharomyces japonicus yFS275] Length = 669 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 98/327 (29%), Gaps = 79/327 (24%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLE--VQI--ALAERQYNIAHEKLEMM-LQIPATRE-FAV 157 +K EY++ +L+ Q ALA+ A + + + L + A Sbjct: 313 KKAIRSEQAARPTDEEYIITILKLIAQGCYALAQYDLPEALKCFQALPLAEQNSSFILAK 372 Query: 158 YSL-------------YFESCRIG------D---LNSAQ----------RYATKALDISP 185 L YFE R G D ++A A +AL++ P Sbjct: 373 LGLVYFELVQYDKAVFYFEKLRRGYPARIEDMEVYSTALWHLQKKVELSYLAHEALELHP 432 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 AP + + L +E S+A+ + + + + + E + + + Sbjct: 433 YAPQSWCILANCFSLQREHSQALKCITRAIQLDSTFE----YAYTLQGHEYSANEEYEKA 488 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++++ A + + +A+ +K ++NPH + ++ E Sbjct: 489 KTSFRRAIRINIRHYNAWYGIGMVYLKTGRNDQADFHFKKAAEINPHNSVLMTCIGMIYE 548 Query: 306 ---------------------NTVGKLKRALRLEEIN----------------KESVESL 328 +++ + K+A L + + Sbjct: 549 RMKKFTYALEYYRRACVLDEKSSLARFKKAKVLVSLREYSKALEELEALKVLAPDEANVH 608 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ K+ M A +A + Sbjct: 609 FLLGKLYKRMKKRSLAMRHLTIAWNLD 635 >gi|207727839|ref|YP_002256233.1| hypothetical protein RSMK04163 [Ralstonia solanacearum MolK2] gi|206591080|emb|CAQ56692.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 641 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 10/228 (4%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A A ++++P + + V +WS L + R AIL Sbjct: 137 APSQALTAARLWVELAPTSMPARQVQQLLMVATGQWSEVEPMLQAQLNKVSPGQRADAIL 196 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIW 287 + + + D + + A++ L + D + A A++ + A L+ Sbjct: 197 QLQQQMSK--SNDPVGAV-SALQRLTVHDAQRPETHLALARAKVVAKDNTGALSELDTSL 253 Query: 288 KVNP-HPEIANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 ++ P + + A + L +++ + + S++ + ++++ L DQA Sbjct: 254 RLRPGYEDAAILAAELRADSNPDAAIAGLRTFLKAAPASLDGHLALARLYLVNNQNDQAR 313 Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY---WTQSALHAM 389 A+ KIAP I L L + Y + A + Sbjct: 314 AQFEAIRKIAPNDARIPLALGLLNLQQRQYDAAERYLKEYIAQAAKSP 361 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 65/173 (37%), Gaps = 13/173 (7%) Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L Q ++ + R I + R+ + A ++L S+ A + Sbjct: 115 LAQDTRDPRFAQRATEIAFLTRA--------PSQALTAARLWVELAPTSMPARQVQQLLM 166 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325 ++ + + E +L+ + A+ L S + VG + RL + + Sbjct: 167 VATGQWSEVEPMLQAQLNKVSPGQRADAILQLQQQMSKSNDPVGAVSALQRLTVHDAQRP 226 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 E+ + +++ + A ++ ++++ P E +LA +A+S+ I Sbjct: 227 ETHLALARAKVVAKDNTGALSELDTSLRLRPGYEDAAILAAELRADSNPDAAI 279 >gi|168031095|ref|XP_001768057.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680695|gb|EDQ67129.1| predicted protein [Physcomitrella patens subsp. patens] Length = 523 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 9/96 (9%) Query: 400 YLSSVWLPLSPIS--------KTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSM 451 + ++ P+SP + ++ F + P ++PE + + P +L Sbjct: 281 HPAAGVSPVSPCTPPDLVSALGSVDSFSFSGPPQTPESPEVSHQPYVAPKKIPGHELLGP 340 Query: 452 LNNGKKNHLPSIKKVSSFE-DSTIHPLDPHIRQPDD 486 K PS+ S E D+ P R DD Sbjct: 341 FMAMSKPSAPSVSPEGSHEVDAVSSPAVDDSRSYDD 376 >gi|307354797|ref|YP_003895848.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM 11571] gi|307158030|gb|ADN37410.1| TPR repeat-containing protein [Methanoplanus petrolearius DSM 11571] Length = 253 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 9/163 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 Y A E + L A + +GD A A A +I P+ W Sbjct: 50 SGDYEAALEAINKSLAEEANFALGYATKSGIL---YVMGDFTGALEAADTATEIQPEQAW 106 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + + + A+ + + + + A + +L G S Sbjct: 107 GWISKSNALLALERYDEALEAADTAIEIDPNNADYVNAYINKGTALILL--GRYEESIEA 164 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++++L I I +L + + + K +++P Sbjct: 165 SDKAIELSPTVIEGYINKGNALEYLGRYAEELEVCNKALEIDP 207 >gi|188997368|ref|YP_001931619.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932435|gb|ACD67065.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 329 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 82/226 (36%), Gaps = 29/226 (12%) Query: 158 YSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-----AIT 209 Y L ++ + A +A+ + P+ P V + V + ++ AI Sbjct: 8 YHLLNKAIYHYENENFEMAITLLDEAILLDPEIPEVH--YWRGKVATHDLNQESLEVAIV 65 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L++ + ++ A R KG+ + D ++++L A A+ Sbjct: 66 ELSEAIRLKPDY----ADAYFERGRVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQI 121 Query: 270 LISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEIN 321 + KA LEK+ H E + I+ + +++ R E N Sbjct: 122 ELISGNDEKAMKYLEKV----SHQEGDDRYYYSLGKIFYNAGKYQPA--IEQFNRTIEKN 175 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQ 366 K V++ V + +G+ +A A+ + P + + + +A+ Sbjct: 176 KYFVDAYVYKAHALANIGNYQEAIENLKKAIILVPEEISYFIDMAK 221 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 + + ++ ++ ++ G ++A A+++ P+ KE + LLAQIE + ++ Sbjct: 72 RLKPDYADAYFERGRVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQIELISGNDEKA 131 Query: 378 ILY 380 + Y Sbjct: 132 MKY 134 >gi|113476143|ref|YP_722204.1| hypothetical protein Tery_2526 [Trichodesmium erythraeum IMS101] gi|110167191|gb|ABG51731.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 1154 Score = 44.9 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 9/128 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD +A Y +AL I+P+ ++ E + +L ++ +AI + K + Sbjct: 529 EKGDREAAVNYYNQALKINPELKFLHEKLANNLLLKGDYDQAIIHYQEAIKYNPKSYDAY 588 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS--LISQNKKRKAEVIL 283 A L A S +KG + + ++L+L + + ++ +I Q K +A + Sbjct: 589 ANLGTALS----NKGLLALALEKYYKALELKPSW---AEVYSRIGHIIKQEKMEEAIALF 641 Query: 284 EKIWKVNP 291 EK ++ P Sbjct: 642 EKAIELKP 649 Score = 43.8 bits (102), Expect = 0.072, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 59/182 (32%), Gaps = 12/182 (6%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + +A+++ D + + A+ + NQ K E L Sbjct: 502 AIKSYERAINLKQDYTEAYSNLANILGEKGDREAAVNYYNQALKINPELK----FLHEKL 557 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NP 291 + KGD + E++K S A +L ++ A LEK +K Sbjct: 558 ANNLLLKGDYDQAIIHYQEAIKYNPKSYDAYANLGTALSNKGLLALA---LEKYYKALEL 614 Query: 292 HPEIANIYTH----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P A +Y+ + E + + E+ + VE+ + + + A Sbjct: 615 KPSWAEVYSRIGHIIKQEKMEEAIALFEKAIELKPQFVEAHQQLCDLLSHTTKLAVARKA 674 Query: 348 AM 349 A Sbjct: 675 AD 676 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 63/200 (31%), Gaps = 13/200 (6%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + G+L SA +AL I PD + + A+ + E + Sbjct: 355 ALKQGNLASAIASCKQALKIQPDHSPSYVILGNAFYQQNNLEAAL----HAYRQGLEIDP 410 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + G + +++ L K K +A Sbjct: 411 ELAEVQGNIGSVYLQLGQYKQALFHYQKAIDLKPGLAGIYWNIGKLFQCLGKVDEAINAW 470 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLVIVSKIAL 336 K ++ P+I H NT+ KL R R + ++ E+ ++ I Sbjct: 471 SKALEIQ--PDIVEADFHFKLGNTLVKLSRINDAIKSYERAINLKQDYTEAYSNLANILG 528 Query: 337 EMGSIDQAHAKAMLAMKIAP 356 E G + A A+KI P Sbjct: 529 EKGDREAAVNYYNQALKINP 548 >gi|254569410|ref|XP_002491815.1| Component (70 kDa) of the TOM (translocase of outer membrane) complex [Pichia pastoris GS115] gi|238031612|emb|CAY69535.1| Component (70 kDa) of the TOM (translocase of outer membrane) complex [Pichia pastoris GS115] gi|328351685|emb|CCA38084.1| similar to outer mitochondrial membrane translocase [Pichia pastoris CBS 7435] Length = 605 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 79/219 (36%), Gaps = 14/219 (6%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 N+ +Y Q++ A E E ++ +A L S R G + A Sbjct: 380 NDPDIYYQRGQLSYLRGDLANASENFETCKRLNPKNVYAYIQLACISYREGKIEEAVERF 439 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLE 235 +A P +P V + V + AI + K + + A+ ++ ++ Sbjct: 440 VQAKRTFPTSPEVPNYYGEILVDKNDTEDAIKQFDIAIKLQRSLSTVSIGALGILNKATI 499 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-- 293 A + + + E++++ S +A++ A+ + N+ +A V+ EK K+ P Sbjct: 500 LARRNEFPQAIELLEEAIQVDPKSELAAVQLAQIKLQLNQAEEAIVLFEKTAKLARSPEE 559 Query: 294 --------EIANIYTHLLSENTVGKLKRALRLEEINKES 324 E A I + + + KR + + Sbjct: 560 KQHAISFAEAAKIQARVKKDPALS--KRVEEIIAQAQGH 596 >gi|146421989|ref|XP_001486937.1| hypothetical protein PGUG_00314 [Meyerozyma guilliermondii ATCC 6260] Length = 659 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 81/257 (31%), Gaps = 22/257 (8%) Query: 135 QYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + + + I TR ++ L+ + DL A + ++ + Sbjct: 392 NHRQSEHYFVQLRSIDRTRLEDMEYYLTLLWHLHKKV----DLT---YLADELHEVDAKS 444 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P V + L ++ AI+ N+ + +R + E + + Sbjct: 445 PITWCVVGNLFSLNRDTDDAISCFNKAIR----ADRKFTYAYTLKGHEYFGNDNYEMALE 500 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 + SL + A I+ ++A+ K +NP I ++ E Sbjct: 501 NFRTSLLIDPRHYNALYGIGMVYINLGDFQRADYHFRKAVSINPINIILICCMGMVLEKV 560 Query: 308 VGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 + L++ ++ + + +++ M QA A + +AP + L Sbjct: 561 GKRHLALRQYELATKLQPNNPLPIFKKAQLLFTMQQYSQALAAFEILRDLAPDEASVRFL 620 Query: 364 LAQIEQANSHNTDKILY 380 L Q+ + + Sbjct: 621 LGQLYNIQNEKAKAVRE 637 >gi|15606362|ref|NP_213741.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5] gi|12230801|sp|O67178|Y1088_AQUAE RecName: Full=Uncharacterized protein aq_1088 gi|2983568|gb|AAC07141.1| hypothetical protein aq_1088 [Aquifex aeolicus VF5] Length = 761 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 3/108 (2%) Query: 86 KALYT-GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + L GL+ + A ++ + + L L + ++ + A E Sbjct: 70 QGLSDLGLLYFFLGRVEDAERVLKKALKFSDVDD-ALYARLGA-LYYSQGKLEEAQHYWE 127 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 L + + +Y+L G+L A +AL + PD E Sbjct: 128 RALSLNPNKVEILYNLGVLHLNKGELEKALDLFERALRLKPDFREAEE 175 >gi|299136784|ref|ZP_07029967.1| TPR domain protein [Acidobacterium sp. MP5ACTX8] gi|298601299|gb|EFI57454.1| TPR domain protein [Acidobacterium sp. MP5ACTX8] Length = 444 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 87/253 (34%), Gaps = 18/253 (7%) Query: 110 VSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 ++ T + LL+ + E+ + + + P R A+ +L Sbjct: 101 ITADATLGEPRVALGLLDARAGRLEKAHQELQDAAALTSAAPELRGRALRALASMDQSSH 160 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 ++A+ A+ ++ +A T A A + A T + A + A+ Sbjct: 161 -PDAARDELLAAVKLTGEASSDTLATADLAARAGDNDDAETEFRRAI--AADPQNIDAVA 217 Query: 229 LIARSLENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 +A L K + + A+++ + A +S++K ++A ++E++ Sbjct: 218 GLAHVLVQEKKSEEAETVLTSALKAHPNDPRLVS---QLASVYVSEDKAQQAIPLVEQMR 274 Query: 288 KVNPH--------PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +P +A +Y ++ K L + N + L ++ ++ Sbjct: 275 AADPQLAADDSTTRLLARLY--GMNGQFEDSEKIYKTLVDRNPKDPSLLDDLADAFIQQQ 332 Query: 340 SIDQAHAKAMLAM 352 +A A+ Sbjct: 333 HYPEAQVLLEKAV 345 >gi|260462445|ref|ZP_05810652.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] gi|259031641|gb|EEW32910.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] Length = 593 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 27/242 (11%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ + T + + GD A + KA P++ A Sbjct: 329 DRAEQARTFQVPWESLETWQLVRRGRWHMNRRTRGDTEIALEFFEKAYREDPNSS----A 384 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD--------KGDMIAS 245 V+ + W + F + + + +A+L+ + +G ++ Sbjct: 385 VLNELAWWYFWRAWLRFGDSDDLDKVKQYSRKALLMDSLDARPHAHLGVMDIMRGRPASA 444 Query: 246 YHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEKIWKVNP------HP--EI 295 E+L + + A ++ +A+ L+ A + +++P H E+ Sbjct: 445 VDHLEEALHINPSFAFAHSAMGSARLLL--GDAAGAIPFFVETERLSPFDLYRFHNLGEL 502 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 A Y+ L E+ + A R +++ S + G +A + + M Sbjct: 503 AAAYSFL--EDWPSAISTADRSLDLSPGYFYSRFLKIGALARSGRKQEAMRELAILMTRH 560 Query: 356 PR 357 P Sbjct: 561 PD 562 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 5/132 (3%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNR 225 G SA + +AL I+P + A+ +L + + AI F ++ + + R Sbjct: 438 RGRPASAVDHLEEALHINPSFAFAHSAMGSARLLLGDAAGAIPFFVETERLSPFDLYRFH 497 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +A + + D ++ A SL L + +L +K++A E Sbjct: 498 NLGELAAAYSFLE--DWPSAISTADRSLDLSPGYFYSRFLKIGALARSGRKQEAMR--EL 553 Query: 286 IWKVNPHPEIAN 297 + HP+ + Sbjct: 554 AILMTRHPDFSE 565 >gi|302878311|ref|YP_003846875.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella capsiferriformans ES-2] gi|302581100|gb|ADL55111.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella capsiferriformans ES-2] Length = 961 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 87/298 (29%), Gaps = 48/298 (16%) Query: 97 AHNIPLARKMHSYVSQQHTFHN--EYLVYLL------------EVQIA------------ 130 A + AR+M + QQ + E L L + A Sbjct: 86 AGQLEEARQMLALARQQGLQGDDVEELALRLNRAVSQADAGLPAARAAHPDIDQIDALVA 145 Query: 131 -LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 Q A ++ M F +L + G++ +A A +SP Sbjct: 146 LFNRGQLEEAEKRARAMTVDYPLHAFGWKALGAVYQQHGNIEAALVPMETAASLSPGDVE 205 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y A Q + + A + GD + Sbjct: 206 AHYNLGITYQDLGRLDEACHCYRQAVQINPHY----AEAHSNLGVILQGLGDREEAEQCY 261 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 +L++ A A L + +A I K + P+ A++ +L Sbjct: 262 RRALQIKPGYGAALSNLANLLQMLGRLDEAAACCRTILKSS--PDSADVLFNL-----AN 314 Query: 310 KLKRALRLE----------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 LKR +L N +SV+ + E+G ++A + A++I P Sbjct: 315 ILKRLGQLAEAEASYRVALRFNPDSVQIHGNLGITLKELGRFEEAESSFRQALRINPD 372 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 80/274 (29%), Gaps = 14/274 (5%) Query: 90 TGLMSIAA-HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 L+++ + A K ++ + H L + A +E Sbjct: 141 DALVALFNRGQLEEAEKRARAMTVDYPLHAFGWKAL--GAVYQQHGNIEAALVPMETAAS 198 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + A Y+L +G L+ A +A+ I+P + + A Sbjct: 199 LSPGDVEAHYNLGITYQDLGRLDEACHCYRQAVQINPHYAEAHSNLGVILQGLGDREEAE 258 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + + + L + G + + LK +S A Sbjct: 259 QCYRRALQIKPGY----GAALSNLANLLQMLGRLDEAAACCRTILKSSPDSADVLFNLAN 314 Query: 269 SLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 L + +AE + NP H + L + IN + Sbjct: 315 ILKRLGQLAEAEASYRVALRFNPDSVQIHGNLGITLKELGRFEEAE--SSFRQALRINPD 372 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ + + E+ +D+A + A+++AP Sbjct: 373 YAQAHCNLGVMFKELDRLDEAERCYLTALQLAPD 406 >gi|110598031|ref|ZP_01386311.1| TPR repeat:Peptidase S1C, HrtA/DegP2/Q/S [Chlorobium ferrooxidans DSM 13031] gi|110340379|gb|EAT58871.1| TPR repeat:Peptidase S1C, HrtA/DegP2/Q/S [Chlorobium ferrooxidans DSM 13031] Length = 535 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 60/189 (31%), Gaps = 4/189 (2%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + A+K+ +Y ++ L ++ + Y A +++I Sbjct: 321 AAYGREGQKAKKIEAYKKAVRLNNDFALGWVNLANACVQNGDYEQAISSYMEVVRITPGD 380 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + Y++ G A KA+ +SP + Q Y +A + + + + Sbjct: 381 ASSWYNMGHAYRDAGQFTKAVDAYRKAVTLSPANAQYLIKLGQAYGMAGQDVKQLEAYRK 440 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + L +A + + + +++L + N ++ + Sbjct: 441 ALAVNPAYVDAWLYLGVAYNKSHLEN----EEREAYLKALVIDPNHNAILFNLGQNYLEH 496 Query: 274 NKKRKAEVI 282 ++K + Sbjct: 497 GNRQKGMEV 505 >gi|88705304|ref|ZP_01103015.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88700394|gb|EAQ97502.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 742 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 80/243 (32%), Gaps = 24/243 (9%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 ++ + + GDL +A A D + W A +++ + ++ Sbjct: 419 HRAVAMAALQRGDLRAAPTLLEIAKDGKESSIWRATA-LERASASGA-EGSLQIAQNLLI 476 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLIS 272 R A+ R+++ + + A+ L +A AA L Sbjct: 477 ADDPLLRISAV----RAMQQL----PVTRRYLALAPLIKDPVTGVRMEVAMSLAAVPLDE 528 Query: 273 QNKKRKAEVI-LEKIWKV--NPHPEIANI------YTHLLSENTVGKLKRALRLEEINKE 323 + R+ ++ L +K H ++ + + + L +N + Sbjct: 529 LSPARQQSLLTLFDEYKAVQRQHLDMPATSMQLGIFNATRGDFPAAESAYREALA-LNPQ 587 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 + + + ++ + G +A + A+ + P+ + + +A N D+ L W Sbjct: 588 LISAYLNLADLLRGQGREAEARVQLEKALGVNPQSGDAMHALGLLEARGGNRDRALDWLG 647 Query: 384 SAL 386 A Sbjct: 648 KAA 650 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 86/285 (30%), Gaps = 62/285 (21%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKAL- 181 L Q L + + M Q+P TR A+ L + + A A L Sbjct: 468 LQIAQNLLIADDPLLRISAVRAMQQLPVTRRYLALAPLIKDPVTGVRMEVAMSLAAVPLD 527 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++SP + +Y + ++ + + I NA +GD Sbjct: 528 ELSPARQQSLLTLFDEY----------KAVQRQHLDMPATSMQLGIF-------NATRGD 570 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEI 295 A+ E+L L I A + A L Q ++ +A V LEK VNP H Sbjct: 571 FPAAESAYREALALNPQLISAYLNLADLLRGQGREAEARVQLEKALGVNPQSGDAMH--- 627 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESL------------------------ 328 A + + L +A LE Sbjct: 628 ALGLLEARGGNRDRALDWLGKAAALETAGSRHRFVYGVAQHDFGDAPGALTTLGKLHSAL 687 Query: 329 -----VIVSKIALEM--GSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 V+++ + G D A A + +AP+ + LA Sbjct: 688 PADEQVLLALVNYSAELGKTDMARRYARKLLTLAPQNPNYQRLAA 732 >gi|330844325|ref|XP_003294080.1| hypothetical protein DICPUDRAFT_51299 [Dictyostelium purpureum] gi|325075516|gb|EGC29393.1| hypothetical protein DICPUDRAFT_51299 [Dictyostelium purpureum] Length = 935 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 25/217 (11%) Query: 166 RIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 IGD+ A+ A +P W+ A ++ VLA + + A + Q K E Sbjct: 267 EIGDIKKARLLFKSATTSNPKHAPGWIAAAKLE--VLAGKMADARRMIAQACKECPENEE 324 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +ENA+ + +++ + +S+ + AA Q K +K +L Sbjct: 325 VW--------IENANLQTPDNAKIVLAQAVSIIPHSVKIWLYAANLE-KQLKMKK--RVL 373 Query: 284 EKIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + + P ++ L E+ L RA E ++V+ + ++ + + Sbjct: 374 RRALEFIPTSVKLWKEAVELEEPEDARILLGRA---VECVPDNVDLWLALA----NLETY 426 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDK 377 ++A A + P EI++ AQ+E++ N + Sbjct: 427 EKAREVLNKARQAIPSSPEIWISAAQLEESKGKNDNV 463 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 9/154 (5%) Query: 234 LENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + S +E + K C + AK KA IL K ++ NP Sbjct: 561 AQLEKAHGTKESLDQTLEKATKSCPQFENLWLMYAKEKWISGDVIKAREILAKAFQSNPG 620 Query: 293 PE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E I + SE + LK A L + + ++ I K AL + + Sbjct: 621 SENIWVAAAKIESE--MNDLKAARTLLKKARVVADTERIWMKSALLERELGKDSESEGTL 678 Query: 352 MKIA----PRKEIFLLL-AQIEQANSHNTDKILY 380 ++ A P L+ AQ+E+ + + I Sbjct: 679 IQDALVKYPSSFKLWLMKAQLEERLKKDIETIRQ 712 >gi|301614638|ref|XP_002936805.1| PREDICTED: tetratricopeptide repeat protein 21B-like [Xenopus (Silurana) tropicalis] Length = 1320 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 17/176 (9%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRY 176 L+ L+ + E M ++ T LYF +G + A+ Y Sbjct: 77 SLMALIYAHKKSSHPDREAIQELDSKMKELRKT--AGHRGLYFAGLFLWHVGRHDKAREY 134 Query: 177 ATKALDISPDAPW--VTEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAILLIARS 233 + + IS + V +A + + +++ A+ +L + + + ++ ++ Sbjct: 135 IDRMIKISNGSKEGLVLKAWLDLTCGREAYAKKALKYLEEGLADGTDV-----FAMLGKA 189 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK----KRKAEVILEK 285 + + + L C I A I K ++ A +L+K Sbjct: 190 HYLEMRQNYSEALEVINRILVHCPGFIPALIKKMKLQLALQDWEQTVETALRLLQK 245 >gi|307726113|ref|YP_003909326.1| cellulose synthase operon C domain-containing protein [Burkholderia sp. CCGE1003] gi|307586638|gb|ADN60035.1| cellulose synthase operon C domain protein [Burkholderia sp. CCGE1003] Length = 1646 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 26/215 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G M +A H+ A + + ++ + + + L+ A A + + Sbjct: 407 GEMLLANHDAAGAEQAYRMALRRQADNPDAIRGLVGALAAQGRGD--EALQFANQLNAEQ 464 Query: 151 ATREFA---VYSLYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 ++ + + GDL SA+ AL +PD PW+ + + YV Sbjct: 465 QSKAGGINRLRGEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQG 524 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD-----------MIASYHDAIE 251 + A + ++ + L A +L +A+ D A DA+ Sbjct: 525 AVANARSMMDGLLAAHPDMTD----ALYASALLSAETQDWSTGLAQLERIPAAQRTDAMA 580 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 SL+ + A + + ++A L Sbjct: 581 SLQHRLWVHQQAELATRM-AHAGQTQQALATLRAA 614 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 90/324 (27%), Gaps = 46/324 (14%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-------LEVQ--IALAERQYN 137 ALY + A+ + + + S V Q L AL Sbjct: 246 ALYQAYLQGASDDAAVKARFDSMVQQDKAARERAQENASVDARGRLIADGFAALDHDDPA 305 Query: 138 IAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW------ 189 A K +L T + + + A+ Y +A A W Sbjct: 306 SARAKFSSVLANSPNDTDALGGMGIA--ALKQEHFAEARNYLERASRNGNPARWKTALDS 363 Query: 190 ------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 ++A + E+++A + + +LL L N D Sbjct: 364 ATYWTYTSDA-IGARS-NGEFAKAKALFERAIALNP-SDVTAQVLLGEMLLANHDAAGAE 420 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 +Y A+ ++I + A + ++ + L + A L Sbjct: 421 QAYRMALRRQADNPDAIRGLVGALAAQGRGDEALQFANQLNAEQQSK-----AGGINRLR 475 Query: 304 SENTVGK---------LKRALRLEEIN----KESVESLVIVSKIALEMGSIDQAHAKAML 350 E + L A L E + + +++I + G++ A + Sbjct: 476 GEAQAAQARAAEARGDLGSARSLFEDALLNTPDDPWLRLDLARIYVRQGAVANARSMMDG 535 Query: 351 AMKIAPRKEIFLLLAQIEQANSHN 374 + P L + + A + + Sbjct: 536 LLAAHPDMTDALYASALLSAETQD 559 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 65/228 (28%), Gaps = 40/228 (17%) Query: 141 EKLEMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKAL--------DISPDAPWVT 191 E + + P + A L + D A YA I+ Sbjct: 160 EYYQALSATPQGWDQARRGLEQLARDNPDDPRYALAYAQHLTYRDVTRRDGIARLQKLAG 219 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ V K W +A+ +L + + A L A +D + A + ++ Sbjct: 220 DSTVGA-SAKKSWRQALLWL--------DARPSDAALYQAYLQGASDDAAVKARFDSMVQ 270 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 K AA+ +N A L IA+ + L ++ Sbjct: 271 QDK-----------AARERAQENASVDARGRL-----------IADGFAALDHDDPASAR 308 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + + ++L + AL+ +A A + Sbjct: 309 AKFSSVLANSPNDTDALGGMGIAALKQEHFAEARNYLERASRNGNPAR 356 >gi|150004611|ref|YP_001299355.1| hypothetical protein BVU_2068 [Bacteroides vulgatus ATCC 8482] gi|254883092|ref|ZP_05255802.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294776725|ref|ZP_06742189.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510] gi|319643612|ref|ZP_07998232.1| hypothetical protein HMPREF9011_03834 [Bacteroides sp. 3_1_40A] gi|149933035|gb|ABR39733.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254835885|gb|EET16194.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294449380|gb|EFG17916.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510] gi|317384781|gb|EFV65740.1| hypothetical protein HMPREF9011_03834 [Bacteroides sp. 3_1_40A] Length = 316 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 49/268 (18%) Query: 99 NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + A++M F ++E L + + A L+ M Sbjct: 32 DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91 Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + ++ + Y + D + + KAL + P + + K+ AI Sbjct: 92 QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + +++ + R+ + D + L L + A + + Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 L + N+ PE A ++ +N + ++ Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ ++ L D+A A A++I P Sbjct: 233 ILSGELYLVNKDFDKALAVYDEAIEINP 260 >gi|330443405|ref|NP_009469.2| Cdc27p [Saccharomyces cerevisiae S288c] gi|329136706|tpg|DAA07040.2| TPA: Cdc27p [Saccharomyces cerevisiae S288c] Length = 758 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 555 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 612 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 613 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 662 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 663 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 722 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 723 VGRKKDAIKELTVAMNLDP 741 >gi|282164220|ref|YP_003356605.1| hypothetical protein MCP_1550 [Methanocella paludicola SANAE] gi|282156534|dbj|BAI61622.1| hypothetical protein [Methanocella paludicola SANAE] Length = 1006 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 77/227 (33%), Gaps = 13/227 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + + + A Y+L + G + A R +A+ + PD + Sbjct: 224 DEAIREFREAVWLKPDDAEAHYNLGLALSKKGQYDQAIREYREAVRLKPDYAKAHNNLGI 283 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + AI + + L +A + NA + + + +++KL Sbjct: 284 LLDYRGQLDEAIKEYYAAVRLRPDDPEAHYNLGVALASRNA----LDEAAQEFRDAVKLR 339 Query: 257 DNSIMASICAAKSLISQNKKRKAEVIL-EKIWK----VNPHPEIANIYTHL-LSENTVGK 310 A + +A L E IW H + ++ L ++ + + Sbjct: 340 PGYAEAHYKLGYVFCRKGMLDEAVKELREAIWLRPNYSEAHYNLGVVFGKKDLMDDAIRE 399 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 LK A+RL E E+ + G +D A + A+++ P Sbjct: 400 LKDAIRL---RPEYAEAHYNLGLAFDYKGLLDDAIREYREAIRLKPD 443 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 71/190 (37%), Gaps = 7/190 (3%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A R ++A+ PD + + AI + + ++ A + Sbjct: 54 DEAIREYSEAVRQKPDYAEAHYNLAVAFDDKGLLDDAIREFREAVRLNPDF--AEAHFNL 111 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 +L+ DKG + + + E+L+L + A +L +N+ A + +++ Sbjct: 112 GAALD--DKGLLDDAIMEYREALRLSPDFARAHYNMGIALGKRNQLDDAVKEFKDALRID 169 Query: 291 P-HPEIANIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P +PE+ +L + + +K + + E+ + G +D+A + Sbjct: 170 PDYPEVHYNMGVVLGKKGMLDEAIKEFREAIRLKADDAEAHYNLGVSLDYKGLVDEAIRE 229 Query: 348 AMLAMKIAPR 357 A+ + P Sbjct: 230 FREAVWLKPD 239 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 73/230 (31%), Gaps = 19/230 (8%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + ++ A Y+L G L+ A R +A+ ++PD + Sbjct: 54 DEAIREYSEAVRQKPDYAEAHYNLAVAFDDKGLLDDAIREFREAVRLNPDFAEAHFNLGA 113 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 AI + + + ++ R + + + + + ++L++ Sbjct: 114 ALDDKGLLDDAIMEYREALRLSPDFAR----AHYNMGIALGKRNQLDDAVKEFKDALRID 169 Query: 257 DNSIMASICAAKSLISQN-------KKRKAEVILEKIWKVNPHPEIANI--YTHLLSENT 307 + L + + R+A + K H + Y L+ E Sbjct: 170 PDYPEVHYNMGVVLGKKGMLDEAIKEFREAIRL--KADDAEAHYNLGVSLDYKGLVDEA- 226 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ + + E+ + + G DQA + A+++ P Sbjct: 227 ---IREFREAVWLKPDDAEAHYNLGLALSKKGQYDQAIREYREAVRLKPD 273 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 59/196 (30%), Gaps = 11/196 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G L+ A + +A+ + D + AI + + Sbjct: 185 KKGMLDEAIKEFREAIRLKADDAEAHYNLGVSLDYKGLVDEAIREFREAVWLKPD----D 240 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A L + KG + + E+++L + A L + + +A Sbjct: 241 AEAHYNLGLALSKKGQYDQAIREYREAVRLKPDYAKAHNNLGILLDYRGQLDEAIKEYYA 300 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 ++ P H + + + + ++ E+ + + G Sbjct: 301 AVRLRPDDPEAHYNLGVALASRNALDEAA--QEFRDAVKLRPGYAEAHYKLGYVFCRKGM 358 Query: 341 IDQAHAKAMLAMKIAP 356 +D+A + A+ + P Sbjct: 359 LDEAVKELREAIWLRP 374 >gi|281491675|ref|YP_003353655.1| TPR repeat-containing protein, Tetratricopeptide repeat family [Lactococcus lactis subsp. lactis KF147] gi|281375393|gb|ADA64906.1| TPR repeat-containing protein, Tetratricopeptide repeat family [Lactococcus lactis subsp. lactis KF147] Length = 418 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 23/198 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATRE 154 + A + + + + + L + + Y+ A + + + T+ Sbjct: 114 GDFETA--ISKLEEARELSDSPLITFAL-AESYFEQGDYSAAITEYAKLSERKILHETK- 169 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAI 208 S+Y RIGD + A L+ S + E + + Y +RAI Sbjct: 170 ---ISIY---QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAI 223 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + +K E+ +A + + A+ A + +K N++ A+K Sbjct: 224 ANFKRLEKMDVEFLNYE----LAYAQTLEANQEFEAALEMAKKGMKKNPNAVPLLHFASK 279 Query: 269 SLISQNKKRKAEVILEKI 286 K AE L Sbjct: 280 ISFKLKDKAAAERYLMDA 297 >gi|259144761|emb|CAY77700.1| Cdc27p [Saccharomyces cerevisiae EC1118] Length = 751 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 548 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 605 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 606 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 655 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 656 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 715 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 716 VGRKKDAIKELTVAMNLDP 734 >gi|256273893|gb|EEU08813.1| Cdc27p [Saccharomyces cerevisiae JAY291] Length = 322 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 119 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 176 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 177 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 226 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 227 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 286 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 287 VGRKKDAIKELTVAMNLDP 305 >gi|254492569|ref|ZP_05105741.1| hypothetical protein MDMS009_2911 [Methylophaga thiooxidans DMS010] gi|224462461|gb|EEF78738.1| hypothetical protein MDMS009_2911 [Methylophaga thiooxydans DMS010] Length = 532 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 68/234 (29%), Gaps = 14/234 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAP 188 AL Q +A + ML+ +++LY + A KAL I P+ Sbjct: 21 ALNTGQLGVAESTAKKMLKQFPNAFV-LHNLYGNALAGQNKFKDAVDAFRKALKIDPNVA 79 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + V AI + L A + + + Sbjct: 80 ELHFNVGILLTNLNRTEEAINSYRKAVSLKSSLVDAHYNLGAAYQSQQQFE----KAGKS 135 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303 ++++L A L Q + +A K V + A + +L Sbjct: 136 YQKAVELQPGFYEAMANLGVVLQEQGRLEEAVEAYNKALAVQ---QDAQTFFNLGTALKN 192 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + IN + E + ++ + G D++ A+ + P Sbjct: 193 QGKLGDAIDAYNQALVINPDYAEVHSNIGEVLRDQGRYDESVKAYKQALTLDPD 246 >gi|207347913|gb|EDZ73938.1| YBL084Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 253 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 50 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 107 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 108 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 157 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 158 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 217 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 218 VGRKKDAIKELTVAMNLDP 236 >gi|190408903|gb|EDV12168.1| anaphase promoting complex subunit CDC27 [Saccharomyces cerevisiae RM11-1a] Length = 752 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 549 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 606 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 607 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 656 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 657 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 716 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 717 VGRKKDAIKELTVAMNLDP 735 >gi|151946316|gb|EDN64538.1| anaphase promoting complex (APC) subunit [Saccharomyces cerevisiae YJM789] Length = 749 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 546 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 603 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 604 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 653 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 654 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 713 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 714 VGRKKDAIKELTVAMNLDP 732 >gi|496695|emb|CAA56022.1| CDC27 D-618 protein [Saccharomyces cerevisiae] Length = 618 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 415 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 472 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 473 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 522 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 523 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 582 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 583 VGRKKDAIKELTVAMNLDP 601 >gi|584897|sp|P38042|CDC27_YEAST RecName: Full=Anaphase-promoting complex subunit CDC27; AltName: Full=Anaphase-promoting complex subunit 3; AltName: Full=Cell division control protein 27 gi|536136|emb|CAA84905.1| CDC27 [Saccharomyces cerevisiae] Length = 758 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 18/199 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K +Q N Y L+ + + A L A Y Sbjct: 555 DHDAAIKAFEKATQLD--PNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYY 612 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++G A Y KA I+P V+ ++ L K+K Sbjct: 613 GLGTSAMKLGQYEEALLYFEKARSINP-----VNVVLICCCG-----GSLEKLGYKEKAL 662 Query: 219 KEW----NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + L + + E +KL + A ++ Sbjct: 663 QYYELACHLQPTSSLSKYKMGQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRI 722 Query: 273 QNKKRKAEVILEKIWKVNP 291 +K+ A L ++P Sbjct: 723 VGRKKDAIKELTVAMNLDP 741 >gi|15641914|ref|NP_231546.1| tetratricopeptide repeat protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591427|ref|ZP_01678706.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727139|ref|ZP_01680313.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147675765|ref|YP_001217445.1| tetratricopeptide repeat protein [Vibrio cholerae O395] gi|153217631|ref|ZP_01951312.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153819858|ref|ZP_01972525.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153824009|ref|ZP_01976676.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153825232|ref|ZP_01977899.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|153831378|ref|ZP_01984045.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227082042|ref|YP_002810593.1| hypothetical protein VCM66_1836 [Vibrio cholerae M66-2] gi|229507992|ref|ZP_04397497.1| hypothetical protein VCF_003224 [Vibrio cholerae BX 330286] gi|229511770|ref|ZP_04401249.1| hypothetical protein VCE_003179 [Vibrio cholerae B33] gi|229515298|ref|ZP_04404758.1| hypothetical protein VCB_002955 [Vibrio cholerae TMA 21] gi|229518908|ref|ZP_04408351.1| hypothetical protein VCC_002935 [Vibrio cholerae RC9] gi|229521834|ref|ZP_04411251.1| hypothetical protein VIF_002371 [Vibrio cholerae TM 11079-80] gi|229523932|ref|ZP_04413337.1| hypothetical protein VCA_001511 [Vibrio cholerae bv. albensis VL426] gi|229529062|ref|ZP_04418452.1| hypothetical protein VCG_002155 [Vibrio cholerae 12129(1)] gi|229607538|ref|YP_002878186.1| tetratricopeptide repeat protein [Vibrio cholerae MJ-1236] gi|254849000|ref|ZP_05238350.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255745329|ref|ZP_05419278.1| hypothetical protein VCH_001677 [Vibrio cholera CIRS 101] gi|262153567|ref|ZP_06028696.1| putative heat shock protein [Vibrio cholerae INDRE 91/1] gi|262167467|ref|ZP_06035174.1| putative heat shock protein [Vibrio cholerae RC27] gi|297579429|ref|ZP_06941357.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298498051|ref|ZP_07007858.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9656447|gb|AAF95060.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546722|gb|EAX56898.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630517|gb|EAX62909.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124113425|gb|EAY32245.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|126509588|gb|EAZ72182.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126518467|gb|EAZ75690.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146317648|gb|ABQ22187.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148873140|gb|EDL71275.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|149741211|gb|EDM55262.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|227009930|gb|ACP06142.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227013810|gb|ACP10020.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229332836|gb|EEN98322.1| hypothetical protein VCG_002155 [Vibrio cholerae 12129(1)] gi|229337513|gb|EEO02530.1| hypothetical protein VCA_001511 [Vibrio cholerae bv. albensis VL426] gi|229340759|gb|EEO05764.1| hypothetical protein VIF_002371 [Vibrio cholerae TM 11079-80] gi|229343597|gb|EEO08572.1| hypothetical protein VCC_002935 [Vibrio cholerae RC9] gi|229348003|gb|EEO12962.1| hypothetical protein VCB_002955 [Vibrio cholerae TMA 21] gi|229351735|gb|EEO16676.1| hypothetical protein VCE_003179 [Vibrio cholerae B33] gi|229355497|gb|EEO20418.1| hypothetical protein VCF_003224 [Vibrio cholerae BX 330286] gi|229370193|gb|ACQ60616.1| hypothetical protein VCD_002450 [Vibrio cholerae MJ-1236] gi|254844705|gb|EET23119.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255737159|gb|EET92555.1| hypothetical protein VCH_001677 [Vibrio cholera CIRS 101] gi|262024164|gb|EEY42858.1| putative heat shock protein [Vibrio cholerae RC27] gi|262030694|gb|EEY49329.1| putative heat shock protein [Vibrio cholerae INDRE 91/1] gi|297537023|gb|EFH75856.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297542384|gb|EFH78434.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|327484456|gb|AEA78863.1| Heat shock (predicted periplasmic) protein YciM, precursor [Vibrio cholerae LMA3894-4] Length = 389 Score = 44.9 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 48/342 (14%), Positives = 101/342 (29%), Gaps = 65/342 (19%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + L + + + A + E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFEQLIDEPEHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + + Y +EW +AI Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIECATALV 168 Query: 216 KNAKEW-NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K ++ N A ++ + + ++L+ + A+I K + Sbjct: 169 KLGRKRMKVNIAHFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNE 228 Query: 275 KKRKAEVILEKIWKVNPHPE----------IANIYTHL-LSENTVGKLKRALRLEEINKE 323 +K LE + + + +A Y HL ++ + L+R + NK Sbjct: 229 DYQKTIDHLEMVLEQ----DIDFIGEVLNTLAECYHHLGREQDLITFLRRCIA----NKA 280 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ--IEQANSHNTDKILYW 381 V + ++++++ + I A + P + F L I +A L Sbjct: 281 GVSAELMLAQLVAQHEGIAAAQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLST 340 Query: 382 TQSALHAMP--DPLWISDDGYLSSV---WLPLSPISKTLCYF 418 Q + P + S+ W P K Sbjct: 341 LQRLVGEQLKVKPHYRCRKCGFSTHSLYWH--CPSCKNWGSI 380 >gi|328950327|ref|YP_004367662.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] gi|328450651|gb|AEB11552.1| Tetratricopeptide TPR_1 repeat-containing protein [Marinithermus hydrothermalis DSM 14884] Length = 496 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 88/301 (29%), Gaps = 43/301 (14%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + + L +Y A E +L + A + L R G+L +A+ + Sbjct: 41 TRIALGRAYLEAGRYEDAARLFEDVLALDYNNFAAHFGLGLAHYRQGNLKAARFEFEQLT 100 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-----KKNAKEWNRNRAILLIARSLEN 236 + P+ + Y A W A + ++ +A L +A + Sbjct: 101 HLYPERFEGWYNLAVVYAQANNWEAATEAFTRAIELGEAQDLATPELKQAYLGLAEAHRK 160 Query: 237 ADKGDMIAS----------------------YHDAIESLKLCDNS----------IMASI 264 + D A A E+L+ + + A Sbjct: 161 QGRPDQAAEVLKRALARFEGDLEVTYLLAENLTLAGEALEAIPHLYSVLQKDRGHVAAVS 220 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEE 319 A + Q + +A L++ P I L + + + Sbjct: 221 LLADIYVGQGLRDRALRELDRSLAQAADPRIQAQLLLKKALLLQGAQPHQSRELLEQAVQ 280 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKI 378 ++ + ++ + L+ G +A LA ++ P + + L +A + + + Sbjct: 281 LDPDLWQAHYNLGVAWLKAGDPSRAMQSFRLAYRLQPNEPRVLLGMAVAADQLGESAEAL 340 Query: 379 L 379 Sbjct: 341 R 341 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 83/293 (28%), Gaps = 24/293 (8%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Q YL + + + + A E L+ L Y L Sbjct: 132 RAIELGEAQDLATPELKQAYLGLAEAHRKQGRPDQAAEVLKRALARFEGDLEVTYLLAEN 191 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G+ A + L + YV RA+ L++ A + Sbjct: 192 LTLAGEALEAIPHLYSVLQKDRGHVAAVSLLADIYVGQGLRDRALRELDRSLAQAADPRI 251 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L+ + S ++++L + A + + +A Sbjct: 252 QAQ--LLLKKALLLQGAQPHQSRELLEQAVQLDPDLWQAHYNLGVAWLKAGDPSRAMQSF 309 Query: 284 EKIWKVNPH-PEIA---NIYTHLLSENTVG-KLKRALRLEEINKESVESLVIVSKIALEM 338 +++ P+ P + + L E+ + + E+LV++ K A + Sbjct: 310 RLAYRLQPNEPRVLLGMAVAADQLGESAEALRFAGLAAAIAEGRTKAEALVLIGKSAYRL 369 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G D A A+ + + + W A +A D Sbjct: 370 GRYDAALEALGQAVALDDQ-----------------DGQAWLWLGLAAYAARD 405 >gi|326387239|ref|ZP_08208849.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326208420|gb|EGD59227.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 689 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 67/199 (33%), Gaps = 15/199 (7%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA--KEWSRAITFLNQKKKNAKEW 221 + D A A + L + P P +++ L + + A L + + Sbjct: 36 ALLGRDPAMALGQAREILRVVPGHPQAM--LIEGQALRLLGDLAAARAVLARLAADQP-- 91 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-- 279 A+ L +L + G+ + +L L + + A A +L ++ A Sbjct: 92 --RSALTLFELALVHGQMGEPRQAVVALERALGLKPDFLPAWHALAGALRETGREADARI 149 Query: 280 --EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +E + P + + +N + +L + ++A Sbjct: 150 ADAKAVEAATRD---PVLVKAAIAMHQQNFQTVEAMLEERIRMLPRDAAALRLYGEVAWR 206 Query: 338 MGSIDQAHAKAMLAMKIAP 356 G +DQA A+ +++AP Sbjct: 207 QGQLDQAIARLKRTLEVAP 225 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 11/297 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + L+E Q A L + ++ L Sbjct: 43 AMALGQAREILRVVPGHPQAMLIEGQALRLLGDLAAARAVLARLAADQPRSALTLFELAL 102 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++G+ A +AL + PD A+ + A K + Sbjct: 103 VHGQMGEPRQAVVALERALGLKPDFLPAWHALAGALRETGREADARI---ADAKAVEAAT 159 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R+ ++ A ++ + + A E +++ A + Q + +A Sbjct: 160 RDPVLVKAAIAMHQQNFQTVEAMLE---ERIRMLPRDAAALRLYGEVAWRQGQLDQAIAR 216 Query: 283 LEKIWKVNPHPEIA-NIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 L++ +V P A + + + + L A L E +SV ++ + + + +G Sbjct: 217 LKRTLEVAPGFGAARELLVRIMQMGPDVADALVHASILLEDEPDSVGHALLKASLQVRLG 276 Query: 340 SIDQAHA-KAMLAMKIAPRKEIFLLLAQIEQANS-HNTDKILYWTQSALHAMPDPLW 394 + A L + + ++L L +E+ Y AL W Sbjct: 277 EQEAAGTIYRGLVARGVDQPRVWLNLGHVEKTLGNQADAIAAYRRSIALDPALGEGW 333 >gi|258576719|ref|XP_002542541.1| hypothetical protein UREG_02057 [Uncinocarpus reesii 1704] gi|237902807|gb|EEP77208.1| hypothetical protein UREG_02057 [Uncinocarpus reesii 1704] Length = 419 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 17/171 (9%) Query: 134 RQYNI-AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT- 191 A L Q P Y + GD + A ++ + L + PD+ Sbjct: 99 GDAQNIAMSLLRENSQDPDALFLRGRLFYLQ----GDADQAIKHFKRVLSLDPDSTQAVK 154 Query: 192 -----EAVVQQYVL------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + +++ A+ + AI + + +L R+ + Sbjct: 155 YLRMVQKLLRIKDEGNTAFKARRYREAIAKYTAGLEVDPTNKDINSKILQNRAQARYNIN 214 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + D ++L+L + A AK+ ++ KA L+ I + +P Sbjct: 215 EYDKAIEDCTKALELDPTYVKAKRVRAKTYGTKGDWEKAVNELKAIGESHP 265 >gi|171915863|ref|ZP_02931333.1| hypothetical protein VspiD_31870 [Verrucomicrobium spinosum DSM 4136] Length = 1369 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 22/176 (12%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 +I + + LAR+ V + Q + +A ++ E +L Sbjct: 610 AIHSGEVWLARRPSLNVRRWL------------AQTVFTSGDHKLALQQFEEILATDPAN 657 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + + Y L G+ A A K L ++P A+ + K + A + Sbjct: 658 KRSAYDLAEYCNEAGEHTRAAEVAEKVLKDEAESPRALMALGWSQMGRKWYKDAKQTFER 717 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASY---------HDAIESLKLCDNS 259 +KN K+ AI + +L D D+ A++ LK+ D+ Sbjct: 718 AAQKNPKDTEVQSAIRSASAALGQGDNSDIKQMLPPVETPPEVLSALDQLKVPDDL 773 >gi|77457281|ref|YP_346786.1| MCP methyltransferase, CheR-type [Pseudomonas fluorescens Pf0-1] gi|77381284|gb|ABA72797.1| putative chemotaxis-related methyltransferase [Pseudomonas fluorescens Pf0-1] Length = 425 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 118 NEYLVYLLEVQIALA-ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 N LL ALA E + A E L+ Y L S G AQ + Sbjct: 315 NPDATTLLANIAALANEGKSAEARAACEQYLRSHEPVAQVFYWLGLLSDVAGSALEAQGF 374 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 KAL + P P + + + A + ++ + + R Sbjct: 375 YRKALYLEPQHPEALMHLAALLQAQGDTAGARRLQERAARSGRTADSERK 424 >gi|291566679|dbj|BAI88951.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 729 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 73/265 (27%), Gaps = 28/265 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA------ 151 A + ++ + + +L LL Q Q A E + P Sbjct: 197 EAIAAYRQEITLNPDFYWSHFHLGDLLSQQ-----NQPEEAIEAYRQAIAINPQQPEAHQ 251 Query: 152 --TREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 T + + E + G A + PD W + + ++W AI Sbjct: 252 RLTEILSRHQKTGEDALLTGRYEEAIAIYRDMVAARPDYSWGYYGLGLALLNQRQWREAI 311 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 NQ + + + L +G + + +++ + I Sbjct: 312 DVFNQAISINPDC--FWSYNHLGYCL--FKQGKISPAIDAYKQAIAIDPEIPEVYIRLGD 367 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANI---------YTHLLSENTVGKLKRALRLEE 319 +L+ Q A K P EIA + + L E + Sbjct: 368 ALLQQPDIDGAIAAYLDAIKAQPEAEIAYLKLRHLRTYSFIKLQPEQIEAIASSYQQAIS 427 Query: 320 INKESVESLVIVSKIALEMGSIDQA 344 E + + E+G I +A Sbjct: 428 QVPHYPEPYINYGDLLTEIGQISEA 452 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 81/248 (32%), Gaps = 13/248 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q +++Q A +++ ++ + L R+G + A + + ++PD Sbjct: 152 GQALSSQKQDEQAITAYRKAIELKPDFCWSYHHLAVILTRLGRVEEAIAAYRQEITLNPD 211 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENADK---G 240 W + + AI Q E ++ +L D G Sbjct: 212 FYWSHFHLGDLLSQQNQPEEAIEAYRQAIAINPQQPEAHQRLTEILSRHQKTGEDALLTG 271 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + + + +L++Q + R+A + + +N P+ Y Sbjct: 272 RYEEAIAIYRDMVAARPDYSWGYYGLGLALLNQRQWREAIDVFNQAISIN--PDCFWSYN 329 Query: 301 HL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 HL + + I+ E E + + L+ ID A A + A+K Sbjct: 330 HLGYCLFKQGKISPAIDAYKQAIAIDPEIPEVYIRLGDALLQQPDIDGAIAAYLDAIKAQ 389 Query: 356 PRKEIFLL 363 P EI L Sbjct: 390 PEAEIAYL 397 >gi|239905482|ref|YP_002952221.1| hypothetical protein DMR_08440 [Desulfovibrio magneticus RS-1] gi|239795346|dbj|BAH74335.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 1619 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 79/291 (27%), Gaps = 22/291 (7%) Query: 92 LMSIAAHNIP--LARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQ 148 ++S+ A AR+ ++ Q + + + E A +L Sbjct: 700 VISLLAGENRFTEARQYAAWYDAQVAKGDRAVFG--TAAVVRLELGDPAGAEALYRKLLT 757 Query: 149 IPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 A A P + + ++ Sbjct: 758 QNPNSLDYLGGLGRALNRQSRYAQTGAALGNAYAASADPTL---GALLCEASSAQGDYRE 814 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 AI + + L A + E A Y L+L +S+ Sbjct: 815 AIRLAEVGLARSP--KDRELLRLAAEAAEFAKNLPACEGY--VRRVLELDPDSLTMQNML 870 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEIN 321 + L+ Q K +AE + I NPH + ++Y LS K A L E Sbjct: 871 GRVLLDQEKFPEAEEHFQAILAKNPHQLSSLRGLLSVYQ--LSGKADKAYKVAKALREAA 928 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQAN 371 + + + + A + A+ + P + L A + A Sbjct: 929 PDDASAQLKFAIAAAGDHAFRPAYPMLEKLHEFGPGSGVLCLYYADVRDAE 979 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 67/197 (34%), Gaps = 5/197 (2%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD A + + L ++P + V+ ++ A +A+ Sbjct: 670 AYLDGDKVQALTHFQRCLALAPADDAMRLRVISLLAGENRFTEARQ--YAAWYDAQVAKG 727 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +RA+ A ++ + GD + + L NS+ ++L Q++ + L Sbjct: 728 DRAVFGTA-AVVRLELGDPAGAEALYRKLLTQNPNSLDYLGGLGRALNRQSRYAQTGAAL 786 Query: 284 EKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + + P + + S + ++ A + + E L + ++ A ++ Sbjct: 787 GNAYAASADPTLGALLCEASSAQGDYREAIRLAEVGLARSPKDRELLRLAAEAAEFAKNL 846 Query: 342 DQAHAKAMLAMKIAPRK 358 +++ P Sbjct: 847 PACEGYVRRVLELDPDS 863 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 5/126 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ G L+ A +AL P P + + AK+++ A+ L K + Sbjct: 35 QQAAARGQLDQAMDMVNQALSQDPAYPPLWNQKASLQIKAKDYAGAMQTLAVALKVEPD- 93 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +L +L D+ A + L D A + L K Sbjct: 94 -NIETNVLALSALLRLDEKAGGKDPALARYAAGLSDG--TAGALVSDLLTRPGAKADLRR 150 Query: 282 ILEKIW 287 L W Sbjct: 151 FL-AAW 155 >gi|219116100|ref|XP_002178845.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409612|gb|EEC49543.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 500 Score = 44.9 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 22/219 (10%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-- 214 + S E+ +GD +A +Y +A+ + P++ + + + + A+ ++Q Sbjct: 45 LRSNAEEAMAVGDYTTAVQYLQEAITLEPESAVNHYKLYRIRHRKRHYLEALRDISQAVE 104 Query: 215 KKNAKEWNRNRAILL-----IARSLENADKGDMIASYHDAIESLKLCDNSIMAS---ICA 266 +++ + + +A LL R++ D + E+ K+C +I + Sbjct: 105 LESSASYRKLKAKLLVTLGQCDRAVAELDLLAPNDQDNAQYETAKMCHETIQLAEYHFLN 164 Query: 267 AKSLISQNKKRKAEVILEKI----WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + ++ ++A +E W + + + G + L + + Sbjct: 165 QEYELAAEYFQQAMSFVEIASDLVWP--------KAKSLFETGDYYGVISDTGMLLKQHP 216 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 VE+ + +G DQA +K+ P + Sbjct: 217 HHVEAYCLRGSAYHRLGEHDQAVLHFREGLKLDPEQADC 255 >gi|282164261|ref|YP_003356646.1| hypothetical protein MCP_1591 [Methanocella paludicola SANAE] gi|282156575|dbj|BAI61663.1| hypothetical protein [Methanocella paludicola SANAE] Length = 805 Score = 44.9 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 80/246 (32%), Gaps = 18/246 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDL----NSAQRYA 177 +++ + + A ++ ++I A Y L + + D A Sbjct: 95 HVVLGMALFNKGSLDEAIKEFRDAIRINPGDAHAHYHLGTALAKKAEDTPILYYEAMLEF 154 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL-IARSLEN 236 +A+ + P+ + + A+ + + E+ L ++ Sbjct: 155 REAIRLMPELAKAHNGLGKALGKRNLMDEAVHEFREAIRIMPEYEEAHMNLAETYSAIHR 214 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--- 293 + E+LKL + A A+ L K +A +L+++ N H Sbjct: 215 SQDAIPEF-----REALKLNNGHPYAKYKLARELRITGKYTEAIALLKEVAVKNSHRIEV 269 Query: 294 --EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+ Y + + + +I ++ ++ + G++D A A A Sbjct: 270 HNELGAAYAA--THDLNNAIAEFNEALKIEPANMAVKGLLGLALTQKGALDDAIAVLKEA 327 Query: 352 MKIAPR 357 + ++P Sbjct: 328 IPLSPD 333 >gi|254477204|ref|ZP_05090590.1| conserved hypothetical protein [Ruegeria sp. R11] gi|214031447|gb|EEB72282.1| conserved hypothetical protein [Ruegeria sp. R11] Length = 849 Score = 44.9 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 86/283 (30%), Gaps = 34/283 (12%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATREF 155 A + LA + + + L E ++A E +A E E + + Sbjct: 506 AGDPHLAGAALRSLDRMGVEDIPD-INLAEAELAKLEGDIETVAEELTEEVAERTENAPR 564 Query: 156 AVYSLY------FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A+ L ++ + A Y ++ D A + EA+V L ++ + Sbjct: 565 ALIELIELSYDERKALSPDVPDLAASYEVESRDSELGAD-LREAIVTALALTGQYHDSFA 623 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L++ ++ + R A++ + L Y + + + A Sbjct: 624 QLDKVDRHDGDAARATAMIPLMTLLTERADDVTFLQYALVFAANGKAADVEPVADLVAAR 683 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESL 328 L+ ++A+ +L+K + NT +L A L + + Sbjct: 684 LLDLGFAQQAQALLKK--------------LAMEPGNTKRRLMLAKAALVQEKPHAALVE 729 Query: 329 V----------IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + + ++ + G +A + F Sbjct: 730 LMGLSGSDADKLRAEALWQNGEYARAGEYLLEVEDKDAAARGF 772 >gi|192361665|ref|YP_001981966.1| type IV pilus biogenesis protein PilF [Cellvibrio japonicus Ueda107] gi|190687830|gb|ACE85508.1| type IV pilus biogenesis protein PilF [Cellvibrio japonicus Ueda107] Length = 261 Score = 44.9 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 15/203 (7%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ SA+ + KA DI+ +P T + Q Y L E + A + + K++ A Sbjct: 58 GNRESARLHLGKAFDINKRSPEATLVLAQLYELEGEPALAEETFKKAIRLKKDFT--EAH 115 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 SL NA + + S + + D A + ++ + KK++A E Sbjct: 116 NSYGISLFNAKRYEEALSQFERAAADLGYDGRAEALVNVGRTAVQLGKKQRAHAAFEHAT 175 Query: 288 KVNPHPEIANIYTHLLS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +N ++ + L L R + L +L+I ++ G Sbjct: 176 VLN--RDLPPAFIELADLNFQEQNYAEAKQNLDRFMALTSATPR---ALLIGIRLERIFG 230 Query: 340 SIDQAHAKAMLAMKIAPRKEIFL 362 + D+ + ++ P +L Sbjct: 231 NKDKEASYLLMLKNKFPYSREYL 253 >gi|317476438|ref|ZP_07935687.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] gi|316907464|gb|EFV29169.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] Length = 1010 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 92/282 (32%), Gaps = 46/282 (16%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF--A 156 LA +M + + + + L Y + + + + A LQ P A Sbjct: 722 AALAAQMPGAIRFEPS-EQDSLTY-IAAEKVYMKGELTPAKASFTRYLQSYPNGAFSLNA 779 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ 213 Y L D + +A K L+ PD+P+ EA++ + KE+ +A+ Q Sbjct: 780 HYYLSIIGKEQKDEVAVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQ 838 Query: 214 KKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSL 270 + A R + A ++ D ++I + + KL A AK+ Sbjct: 839 LQARATTAERRQLGATGVLRCGALLKDDIEVIQAATTLLTEAKLTPELQNEALYYRAKAY 898 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++Q +KA ++ K L E+ + Sbjct: 899 LNQKAVKKAA------------------------DDLKLLAKDTRTLYG-----AEAKFL 929 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQI 367 V++ G A + + + + F+LL+ + Sbjct: 930 VAQQMYNAGEYAAAEKEILNFIDQSTPHAYWLARSFILLSDV 971 >gi|302839984|ref|XP_002951548.1| hypothetical protein VOLCADRAFT_92153 [Volvox carteri f. nagariensis] gi|300263157|gb|EFJ47359.1| hypothetical protein VOLCADRAFT_92153 [Volvox carteri f. nagariensis] Length = 1345 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 34/221 (15%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A +AL P A+ + + + A +R L + Sbjct: 962 ARIVAAEALRKCP----ADVALYVLAAGVELEGGNLELAKSYCQRAYALDRTDKQLFLVW 1017 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 A GD + + +L + + A+ + R+A Sbjct: 1018 PRVEAALGDRLKARLLYERALDMYPLNTKILNLYARFEAEEGSYREA------------- 1064 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 A +Y L + + + + + + ++G+I A A + Sbjct: 1065 ---AELYDRALRIDPLSPVMGVHNRADW-----------ASLEADLGNISLARALLEGGL 1110 Query: 353 KIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDP 392 + PR L+ LA++E+ ++ + A A+ P Sbjct: 1111 EAHPRSTPLLVTLAKVERLEGRYSEALR--LVRAAQAIAGP 1149 >gi|213402289|ref|XP_002171917.1| pre-mRNA-splicing factor prp1 [Schizosaccharomyces japonicus yFS275] gi|211999964|gb|EEB05624.1| pre-mRNA-splicing factor prp1 [Schizosaccharomyces japonicus yFS275] Length = 910 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 88/260 (33%), Gaps = 38/260 (14%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD++ A+ +A + +P++ + A V+ + E RA L + + A Sbjct: 588 KDHGDVDGARNVLGRAFEQNPNSEEIWLAAVKLEFINHEDERARKLLARARIEAGTQRVW 647 Query: 225 RAILLIARSLENADKG-----------------------------DMIASYHDAIESLKL 255 + + R L + D + + E++K Sbjct: 648 TKSISMERVLGHLDSAFQLTEEALKLFQNHDKLWMMKGQMLESQQKVEETRQTYAEAVKH 707 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 C NS+ I + +A VIL++ NP E+ + + E + G + + Sbjct: 708 CPNSVNLWILFIQFERRNTSIVRARVILDRARVKNPKNEL-LWFEAINMEESAGNMPQVK 766 Query: 316 -RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQAN 371 L + +E S ++ SK + +A K + + LL A+I Sbjct: 767 AALAKALQECPSSGLLWSKA---IWLEPRAQRKTRATDALRKCEHNAFLLCTVARIFWIE 823 Query: 372 SHNTDKILYWTQSALHAMPD 391 DK W A+ A D Sbjct: 824 RK-LDKARNWFFKAIKADQD 842 >gi|189189870|ref|XP_001931274.1| NMDA receptor-regulated protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972880|gb|EDU40379.1| NMDA receptor-regulated protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 832 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 12/162 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y A + +M L+I + L C++ D K + P A Sbjct: 91 KNYPEAIKSYKMALRIEPNSLNILRDLALLQCQVRDYEGYIESRRKMMQERPQLRQNWTA 150 Query: 194 VVQQYVLAKEWSRA---ITFLNQKKKN---AKEWNRNRAILLIARSLENADKGDMIASYH 247 + Y L+ ++ A + + K + + A L ++ + GD+ + Sbjct: 151 LAVAYHLSGNYAEAENILKTYEETLKRPPPKTDLEHSEATL--YKNQIIYESGDVERALK 208 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 E ++ + A AK L+ +K +A EK ++V Sbjct: 209 HLEEVVRDSLDRGAALELKAKYLLELGRKEEA----EKAYRV 246 >gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp. 4-46] gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp. 4-46] Length = 1056 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 82/239 (34%), Gaps = 13/239 (5%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +++ + +A + +L P + A G+ + A +AL ++P Sbjct: 443 ALVSKGEPTLAIADYDKALLLDPKSATVYANRG--RAFQDKGEYDRAIADYDQALRLNPK 500 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 L E RAI +Q + ++ +R L DKG+ + Sbjct: 501 DAIALNNRADILRLRHEHDRAIASYDQALQLNPKY----VGAYNSRGLAFQDKGEYDRAI 556 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN----IYTHL 302 + ++L+L I A I + + + +A + +++ + IA + H Sbjct: 557 ANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHE 616 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 E + L +I+ + + G D+A A A++I PR Sbjct: 617 QGEYDRAIIDYDRAL-QIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQIDPRSATA 674 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 8/150 (5%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 ++ A + + P + F GD + A AL I P++ Sbjct: 40 GEHEKAIAEFNLALRLNPKLVSAYINRGFAF--RNKGDYDRAIADYDHALQIDPNSVVAF 97 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + E+ RAI N+ K + + +A + R L K + + D + Sbjct: 98 NNRGDAFYHKGEYDRAIADYNRSIKLSSD----KAAVYNNRGLAFFSKEEYDRAIADYNQ 153 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +L+L + A++ + S+ + +A Sbjct: 154 ALRLDPKYLSAALNRGDAFRSKGEYDRAIA 183 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 77/234 (32%), Gaps = 11/234 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y+ A LQI A+ + GD + A AL I+P+ + Sbjct: 278 GEYDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNG 337 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 E+ RAI +Q + ++ R KG+ + D ++L Sbjct: 338 RGVALQNKGEYDRAIMDYDQALRLDPKY----VFAFANRGDAFRSKGEHDVAIADYNQAL 393 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTV 308 +L N A + L QNK + I + + P Y + Sbjct: 394 RLSPNY--AKAYNGRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPT 451 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + + ++ +S + + G D+A A A+++ P+ I L Sbjct: 452 LAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIAL 505 >gi|17566070|ref|NP_507525.1| hypothetical protein Y59A8B.6 [Caenorhabditis elegans] gi|15718341|emb|CAC14407.3| C. elegans protein Y59A8B.6, confirmed by transcript evidence [Caenorhabditis elegans] Length = 968 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 24/230 (10%) Query: 171 NSAQRYATKALDISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A+ KA +P A W+ A + + A + + ++++ +L Sbjct: 686 DTARGLFGKARAKAPSARVWMKNAHFEWCL--GNVEEAKRLCEECIQKYDDFHKIYLVL- 742 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 D+ + + ++ C I I + + KA V LEK Sbjct: 743 ---GQVLEQMNDVHGARLAYTQGIRKCPGVIPLWILLVRLEEKAGQIVKARVDLEKARLR 799 Query: 290 NPHPEIANIYTHLL--------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 NP + +++ + E ++ RAL+ E S + ++ G Sbjct: 800 NPKND--DLWLESVRFEQRVGCPEMAKERMSRALQ------ECEGSGKLWAEAIWMEGPH 851 Query: 342 DQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + K + + A++ + K W A++ PD Sbjct: 852 GRRAKSIDALKKCEHNPHVLIAAARLFWSERK-IKKAREWFVRAVNLDPD 900 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 25/212 (11%) Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A+ + +P P WV AV+++ + E +N Sbjct: 316 DIKKARMLLKSVRETNPRHPPAWVASAVLEEQA------GKLQTARNFIMEGCEKIKNSE 369 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L L +++ C +S+ A+ K+K +L K Sbjct: 370 ELW----LHAIRLHPPELGRSIVANAVRSCPHSVRLWCKASDLEQDLKDKKK---VLRKA 422 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P ++ L E+ L RA E S E + ++++ + + A Sbjct: 423 LEQIPSSVKLWKAAVELEDPEDARILLTRA---VECCSSSTEMWLALARL----ETYENA 475 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNT 375 A + P I+L A++E+ Sbjct: 476 RKVLNKAREHIPTDRHIWLSAARLEETRGQKD 507 >gi|257060934|ref|YP_003138822.1| hypothetical protein Cyan8802_3148 [Cyanothece sp. PCC 8802] gi|256591100|gb|ACV01987.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 249 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 11/162 (6%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ AI + KN N R ++ G + D +SL L Sbjct: 70 KSRQGDYQGAIADFTEALKNNP----NDINAYYNRGFAYSNLGKFDLALADFSQSLILDP 125 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 + A + + ++A + K+NP H + Y +L + K Sbjct: 126 KMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQ--K 183 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 I+ + E+ ++G +A A A +I Sbjct: 184 DFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225 >gi|195397243|ref|XP_002057238.1| GJ16979 [Drosophila virilis] gi|194147005|gb|EDW62724.1| GJ16979 [Drosophila virilis] Length = 607 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 7/186 (3%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYS-LYFESCRIGDLNSAQRYATKA 180 L Q++ +Y+ + E L + + L+ R D A A Sbjct: 309 FLHAQLSYMNSKYDRSLIFTERALAMDARNIEALLLRGRLFGGLGRHKD---AIDVFRSA 365 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 ++P V + +V ++ K A T + + R+ + A+ Sbjct: 366 RCLAPYRFEVYKGLVACFIRLKWLKEAQTMCALAVRYFRTSPRSYTMF-GGTLFHLANPT 424 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 ++ ++L++ ++ A + ++A V+L K +PHP++ + Sbjct: 425 AKKSARKFVEKALQIDEHYAPGIALMASIYQDEGDTQEAIVLLRKQVASHPHPKLFAMLA 484 Query: 301 HLLSEN 306 LLS + Sbjct: 485 ELLSVD 490 >gi|170698736|ref|ZP_02889801.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria IOP40-10] gi|170136361|gb|EDT04624.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria IOP40-10] Length = 828 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 87/277 (31%), Gaps = 18/277 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL L A + A+ ++ + ++ L + ++ Sbjct: 6 QALQEALAHHQAGRLGEAKTLYDAILHAQ-PGQPDAMHFLGLLACQLKQYDAGLALMERS 64 Query: 146 MLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + P + ++ E R+ D A + +A+ + PD P + A++ Sbjct: 65 LAARPDASYFNNLGNMLRECGRLDD---AIAHYRRAVALRPDYPEAHNNLGNALRDARDP 121 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A+ ++ + + A D G++ A+ +++ A Sbjct: 122 AEAMQSCSRAIELRPGY----AEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHS 177 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319 L +Q++ A V + ++NP H +A + + R Sbjct: 178 NLGNVLRAQDRHADAIVHYRRAIELNPALRVVHRGLAIALRATDDFDGALEHAR----AG 233 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + E + + M D A A +I P Sbjct: 234 LEPDDAEGHCALGRSLRSMNDFDGAARLFERACEIDP 270 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 70/245 (28%), Gaps = 12/245 (4%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L E + A + +L + A++ L +C++ ++ ++L Sbjct: 8 LQEALAHHQAGRLGEAKTLYDAILHAQPGQPDAMHFLGLLACQLKQYDAGLALMERSLAA 67 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 PDA + + AI + ++ A + +L D D Sbjct: 68 RPDASY-FNNLGNMLRECGRLDDAIAHYRRAVALRPDYP--EAHNNLGNAL--RDARDPA 122 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL- 302 + +++L A L + A K + HP A +++L Sbjct: 123 EAMQSCSRAIELRPGYAEAYNNLGNVLQDLGELDAAAASYGKA--IAFHPAYAEAHSNLG 180 Query: 303 ----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + R E+N ++ D A A ++ + Sbjct: 181 NVLRAQDRHADAIVHYRRAIELNPALRVVHRGLAIALRATDDFDGALEHARAGLEPDDAE 240 Query: 359 EIFLL 363 L Sbjct: 241 GHCAL 245 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 30/266 (11%), Positives = 80/266 (30%), Gaps = 57/266 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATR 153 + A + H + E L +L Q ++ A ++ PA R Sbjct: 153 GELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQ-----DRHADAIVHYRRAIELNPALR 207 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 L D + A +A + PD A+ + ++ A + Sbjct: 208 VV-HRGLAIALRATDDFDGALEHAR--AGLEPDDAEGHCALGRSLRSMNDFDGAARLFER 264 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + ++ A + Q Sbjct: 265 --------------------------------------ACEIDPGYAPAWCRLGELRCQQ 286 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRAL----RLEEINKESVESL 328 + ++ + +++ PE+A+ Y L L+ + + ++ + ++N + ++ Sbjct: 287 GEYEESLRLCRHAIELD--PELADAYNFLGLAYHNLDRMAASELSHRHAIDLNPDDADAH 344 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ + +D+A ++ +A ++ Sbjct: 345 HNLAAALFRLDKLDEAMSEYRIAQEL 370 >gi|116749051|ref|YP_845738.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698115|gb|ABK17303.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter fumaroxidans MPOB] Length = 544 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 19/216 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ---------- 213 + A ++ + ALD P A + + Y + +A L Q Sbjct: 202 ALEEKRYEDAVKFLSSALDKQPAANLIHYQLAMAYRGLGDAGKAREHLAQRGIVGLQPPD 261 Query: 214 --KKKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K++ K R +L R + + ++ A+++ + + A I A +L Sbjct: 262 PLKERLDKLVTGYRVHVLTGRRAYGAGRFEEAAEAFQRAVDAN---PDDVGARINLAAAL 318 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVES 327 K R+A L++ +++P A+ LL +K E ++ Sbjct: 319 AGLQKVREAMEQLQEAIRLSPQNSTAHFNLGLLRSHMGEYAESIKHFRIALEARPNDHQA 378 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 ++ + G +A + A+ + P L Sbjct: 379 HAALADALVREGKFGEAFDQYKAAVDLEPNLTAAWL 414 >gi|91203625|emb|CAJ71278.1| putative tpr repeat protein [Candidatus Kuenenia stuttgartiensis] Length = 647 Score = 44.5 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 68/214 (31%), Gaps = 12/214 (5%) Query: 49 YFFLFAWILLFAVSR--FFLSCPAMLFHMLHKR--NYDKGYKALYTGLMSIAAHNIPLAR 104 + + ++L++ + +R + Y L G I A Sbjct: 391 FVVIICFLLMWGTIQRNGIWLNEFTFSTETIRRSPKSYRIYNGL--GYFYYNNGLIDKAI 448 Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 + Q H + L + + A E+L+ +++ A +L Sbjct: 449 QAFEGSIQAMPTHPKAHSNL--GAAYSLKGMQDKAIEELQFAVRLREQYPEAHNNLGLLY 506 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G + A AL +P + Y+ + A++ L + K + Sbjct: 507 KRKGMPDMAINEYVAALKTNPYYADAHNNLGSVYIDTGRYEEALSELEKALKIRSNF--- 563 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ ++ KG + +Y+ +E+ KL Sbjct: 564 -ALAHYNMAVIYFKKGQVEDAYNKLLEAYKLDPG 596 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 56/193 (29%), Gaps = 10/193 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + E +Q T A +L G + A A+ + P + Sbjct: 445 DKAIQAFEGSIQAMPTHPKAHSNLGAAYSLKGMQDKAIEELQFAVRLREQYPEAHNNLGL 504 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y AI K + A D G + + ++LK+ Sbjct: 505 LYKRKGMPDMAINEYVAALKTNPYY----ADAHNNLGSVYIDTGRYEEALSELEKALKIR 560 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKL 311 N +A A + + A L + +K++P H + +Y + Sbjct: 561 SNFALAHYNMAVIYFKKGQVEDAYNKLLEAYKLDPGNADVHLSLGVVYKDHFHDTAKALF 620 Query: 312 KRALRLEEINKES 324 L IN + Sbjct: 621 HIKESL-RINPQH 632 >gi|327481909|gb|AEA85219.1| TPR domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 575 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 86/291 (29%), Gaps = 39/291 (13%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 S V++ +F + L LL ++A +++IA A Sbjct: 31 EDAAPEAAASEVTEYGSFTRQSLYALLVAELAGQRNRFDIALGNYVQQAHATQDAGVAER 90 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + + +G +A + +P+ A Q A + ++ F+ + + Sbjct: 91 G-FRIAEYLGADQAALDTSLIWARNAPENLDAQRAAAVQLARAGRYEESMEFMEKVLQGQ 149 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS------------------- 259 + + L A + + ++ S+ + Sbjct: 150 GD-THFDFLALSASETDPETRAGLLQSFDKLLARHPDNPQLSFGKAVLLQQDDRSEEALA 208 Query: 260 -----------IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHL--L 303 I + + A+ L S + +A +LEK + HPE + Y L Sbjct: 209 LLQKQPAKQRQIPSILLEARLLHSLQRSDEALTLLEK--SLRQHPEDKRLRLTYARLLVE 266 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 E + L + + ++ + +E + +A ++ Sbjct: 267 QERLEDAMGEFATLVQQYPADDDLRFSMALVCMEAEAWREATVYLEELVER 317 >gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 1022 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 8/199 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 R + Y + Y + ++ +YN A LQ Sbjct: 171 AFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIADYNQALQFDPKPI 230 Query: 155 FAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A L F+ +G+ + A T+AL + P + + E+ RAI + Sbjct: 231 IAYNNRGLAFQ--NMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYD 288 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 Q + AI R L +KG+ + D ++L+L ++A + + + Sbjct: 289 QALHLNPNY----AIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRN 344 Query: 273 QNKKRKAEVILEKIWKVNP 291 + + A + ++NP Sbjct: 345 KGENDVAIADYNQALRLNP 363 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 10/201 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREF 155 + A + Y +VY + +Y+ A + + P T + Sbjct: 108 GDYERA--IADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIADYNQALQLDPNYTFAY 165 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 F+ G+ + A ++AL + P + E++RAI NQ Sbjct: 166 NNRGFAFQGK--GEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIADYNQAL 223 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + ++ I R L + G+ + D E+L+L ++A + A + + + Sbjct: 224 Q----FDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGE 279 Query: 276 KRKAEVILEKIWKVNPHPEIA 296 +A V ++ +NP+ IA Sbjct: 280 YDRAIVDYDQALHLNPNYAIA 300 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 10/204 (4%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148 GL A + Y + + + +Y+ A + + Sbjct: 236 RGLAFQNMGEYDRA--ISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHL 293 Query: 149 IPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P L F+ G+ + A ++AL + P + E A Sbjct: 294 NPNYAIAYNNRGLAFQ--NKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVA 351 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I NQ + + + R L +KG+ + D ++++L S +A Sbjct: 352 IADYNQALRLNPSY----STAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRG 407 Query: 268 KSLISQNKKRKAEVILEKIWKVNP 291 +L S+ + +A + ++NP Sbjct: 408 FALQSKGEYDRAITDYNQALQLNP 431 >gi|153003810|ref|YP_001378135.1| hypothetical protein Anae109_0942 [Anaeromyxobacter sp. Fw109-5] gi|152027383|gb|ABS25151.1| Tetratricopeptide TPR_4 [Anaeromyxobacter sp. Fw109-5] Length = 765 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 88/293 (30%), Gaps = 14/293 (4%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 + + + A+++ + V + + + I L E + A + L + Sbjct: 370 AEAYLKLYGGDAAGAKEVVNAVLEGAEGTQSPFLQGVLGAILLREGDLDGARDVLGKAQK 429 Query: 149 IPATREFAVYSLYFESCRIGDLNS--AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 Y L + R G+ A + AL I D W + V + Sbjct: 430 ASPGDVRIAYLLGEQYRRRGEGYELQATGFYDYALRIQKDHVWSILGKAEVLVARGQVGE 489 Query: 207 AITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A +R +A+ R A +G + E+ KL S Sbjct: 490 AGKAAELVLTPQAAASRPQQALAYALRGAVLAAQGKASEASAAEAEAAKLDPASPEIPHL 549 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEI 320 + + Q A L+ ++P ++ L L+ R Sbjct: 550 VGQRKLRQGDAAGAVEALQHAVSIDPRRVSLYADLVRAQLALEGG-AQQALETLKRAVGR 608 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKEIFLLLAQIEQA 370 ES +++ G D A + A+++ P + LA++ +A Sbjct: 609 VGESPRLALLLGDAYQAAGDADLARGQYEKAIQLGRPFPDARVA--LARLHRA 659 >gi|222053746|ref|YP_002536108.1| Exostosin family protein [Geobacter sp. FRC-32] gi|221563035|gb|ACM19007.1| Exostosin family protein [Geobacter sp. FRC-32] Length = 794 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 2/137 (1%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + +Y+ + V + + + A E + + Sbjct: 18 GDYDGA--IAAYLQALQLAPRQPAVLNNLGLAYVESGRLDEAKVIFERFIALDPENAEPW 75 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L GDL +A KAL ++P + + WS AIT + Sbjct: 76 NNLAVVVQMAGDLETATELFRKALALNPQYAEAWYNLGFALEEQRNWSDAITCNRRAILV 135 Query: 218 AKEWNRNRAILLIARSL 234 ++ L + L Sbjct: 136 RTDYAEAHFNLALLHLL 152 >gi|15838397|ref|NP_299085.1| porphyrin biosynthesis protein [Xylella fastidiosa 9a5c] gi|9106874|gb|AAF84605.1|AE004001_10 porphyrin biosynthesis protein [Xylella fastidiosa 9a5c] Length = 389 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 123/367 (33%), Gaps = 25/367 (6%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 L +FF++ L I S + P DV I G Y T+ +L L L Sbjct: 7 LAVWFFLLILGIFSGQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIILLLLWSLR 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 ++ + + + Y +G+ L GL ++ LA ++ S+ Sbjct: 67 SLLALPI-------RIWERYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEVSAI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +++A ++ A+ + + T + S + + + A + Sbjct: 120 ALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLDALE 177 Query: 180 ALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P ++Q + +S T Q+ + E+ R + + D Sbjct: 178 TRPLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFENETIENVLRQAKD 237 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI----WKVNPHPE 294 + + ++LK N + A L +N A + LE+ W N Sbjct: 238 ANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLEN---AAMLSLEQTLDRSWDEN---- 290 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y L + + RA ++ +S L+ + ++A + QA A+ Sbjct: 291 LIRLYGFLPLKEYETRQNRAEHWLTLHPDSPNLLLTLGRLARKQQQYSQAETFLRRAIDK 350 Query: 355 APRKEIF 361 E + Sbjct: 351 GTSAETW 357 >gi|66801425|ref|XP_629638.1| anaphase promoting complex subunit 7 [Dictyostelium discoideum AX4] gi|74996484|sp|Q54D58|APC7_DICDI RecName: Full=Anaphase-promoting complex subunit 7; Short=APC7 gi|60463018|gb|EAL61214.1| anaphase promoting complex subunit 7 [Dictyostelium discoideum AX4] Length = 580 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 9/120 (7%) Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + + + A++ TKAL +SP + + V+ + AI L Sbjct: 425 MALLG----MVLANQPEEREEARKILTKALTLSPHCTDTVLTLSKLNVVEGRFQEAIDIL 480 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 N + E+ ++ + K + +L++ AS A+ + Sbjct: 481 NSQL----EYQETD-LMHTEIAGVYLTKDYHEDAMIHYNSALEINPQYEPASRGIARLEL 535 >gi|293607393|ref|ZP_06689732.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292814237|gb|EFF73379.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 623 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 92/291 (31%), Gaps = 11/291 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+++A + LA + + H + ++ + + A E + + Sbjct: 55 GLIALAYGRLDLAA--DHLRAACRSPHAPAAYHSNLAEVLRRQGLLDEAQEAARRAVALD 112 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + +L G L ++ + + + PD+P + + ++A+ Sbjct: 113 PQQAEGWNNLGIILQEQGQLEASLQCLRRVAALLPDSPQAHNNLGNTCKQLGDNAQALEH 172 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + ++ A L+ S+ D+G + ++ + A A+ Sbjct: 173 YRRALALDPDY----AQALVNLSVALFDEGRSDEALTTIRRAIDIDPLMPQAHEHLAR-- 226 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 I Q +A + + + A + L R L +++ + Sbjct: 227 IEQAGLGRATAPEAQAREHQSIHQEAQALLIAMRHAEAEALLR-GALAA-GEDTPLLWRL 284 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 +++ +G + +A A ++ P E LA++ Sbjct: 285 LAQAIRPLGKVGEARAILERVVRAMPGDAEARFDLAELLLLEGDFEAGWRE 335 >gi|291566860|dbj|BAI89132.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 340 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 60/193 (31%), Gaps = 12/193 (6%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A +A + P+ + A+ ++ + + + I Sbjct: 141 YDEAIASYDRATQLQPNFHPAWRDRGALLMSIGRHEEALQAFDRLLQIQPD---DYGIWY 197 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + ++ D + ++ + + A A++L +A +++ Sbjct: 198 LRGNILMNHLDDYPEAAKSYTRAINIKPDFTPALTAQAQALFRLGDYGEAIASVDESLHH 257 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEIN------KESVESLVIVSKIALEMGSIDQ 343 NPH + L + + + A L N +S + + L G + Sbjct: 258 NPHQR--EAWV-LRGQIFMEIKRYAQALNAYNRAIYLDSNHSQSWLGKAIAYLRQGRDQE 314 Query: 344 AHAKAMLAMKIAP 356 A + A++I P Sbjct: 315 AKDRDQRALEINP 327 >gi|295677297|ref|YP_003605821.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002] gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002] Length = 628 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 89/285 (31%), Gaps = 21/285 (7%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + + L A Q + A E+ L + T A Y+ Sbjct: 62 GQHAEAAALVRRAVDLRPEDAALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYN 121 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G A ++L + P+ + + AI + + Sbjct: 122 LGNAYASLGRHEDAADAFERSLRLQPEDASSHNNLGNALHALGRHAEAIASFRRALELRP 181 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 A+ + SL D+ D +A +L + + A A + + + +A Sbjct: 182 --GHAGALNNMGMSLNALDRPDEAVPCFEA--ALAVEPRFVAAHFNLANTFDATGRHAQA 237 Query: 280 EVILEKIWKVNPH--PEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 E ++ P+ P I + +E + L+RA ++ + + + + Sbjct: 238 VASFEAALRLQPNLPPAIYGMGNALAALGRAEQALPYLERA---VGLDPQFALAWLALGT 294 Query: 334 IALEMGSIDQAHAKAMLAMKIAP--------RKEIFLLLAQIEQA 370 +G+ A A+++ P R +L + E+ Sbjct: 295 AHQALGAHAAAVRALDQALRLRPDLASAHMNRALAWLAMRDFERG 339 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 39/302 (12%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + + + A L + A++ L + G A +A+D+ P Sbjct: 20 RAFAAHRDGRLDDAERGYRATLDHNPSHVDALHLLGVLRHQQGQHAEAAALVRRAVDLRP 79 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---------------NRNRAILLI 230 + + + + AI A + A Sbjct: 80 EDAALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASLGRHEDAADAF 139 Query: 231 ARSLENADK---------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 RSL + G + +L+L A SL + ++ Sbjct: 140 ERSLRLQPEDASSHNNLGNALHALGRHAEAIASFRRALELRPGHAGALNNMGMSLNALDR 199 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 +A E V P H +AN + + + + ++ Sbjct: 200 PDEAVPCFEAALAVEPRFVAAHFNLANTFDA--TGRHAQAVASFEAALRLQPNLPPAIYG 257 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 + +G +QA A+ + P+ +L L QA + + AL Sbjct: 258 MGNALAALGRAEQALPYLERAVGLDPQFALAWLALGTAHQALGAHAAAVRA-LDQALRLR 316 Query: 390 PD 391 PD Sbjct: 317 PD 318 >gi|220907483|ref|YP_002482794.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219864094|gb|ACL44433.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 264 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 7/171 (4%) Query: 123 YLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKA 180 LLE + A + Q+ A + + +++ L E+ + G+ +A A Sbjct: 64 NLLEKGKKAQEKGQHQEAIKAFQRSVKLNPDNLSGYQ-LLSEAQFQAGEQEAAIATLQTA 122 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L P+ A++ +A S +T + + + + SL Sbjct: 123 LKRKPN----DIAMLNTLGMAYLSSDRLTEAERILSQVTDLQPSNKTAYFSLSLVQQRLR 178 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +A + KL + + A + + KA +++ K P Sbjct: 179 QFERAIENAQRAAKLEPENPHPLVVLAVTQWDMGDQTKAVQTYKQVLKKAP 229 Score = 37.2 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 15/170 (8%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ G A + +++ ++PD + + + A E AI L K Sbjct: 70 KKAQEKGQHQEAIKAFQRSVKLNPDNLSGYQLLSEAQFQAGEQEAAIATLQTALKRKP-- 127 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL-ISQNKKRKAE 280 N + + + ++D+ +A L + ++ A SL + Q + R+ E Sbjct: 128 NDIAMLNTLGMAYLSSDR------LTEAERILSQVTDLQPSNKTAYFSLSLVQQRLRQFE 181 Query: 281 VILEKIWKV------NPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 +E + NPHP + T + ++ ++ + + Sbjct: 182 RAIENAQRAAKLEPENPHPLVVLAVTQWDMGDQTKAVQTYKQVLKKAPQY 231 >gi|270293487|ref|ZP_06199689.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274954|gb|EFA20814.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 283 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 31/189 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 LAR +S V + + E L L+ I + +R YN A E +L++ Sbjct: 108 GKDDLARIDYSLVLDIESDNQEAL--LMRAYIYMRQRNYNFAKSDYERLLKLAPRSYNGR 165 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + G +A + + ++ Sbjct: 166 LGLATLEQKEGKYEAALSILNAMIA-----------------------------EKGGES 196 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + A+L +AR+ D + + D E++KL + A + + +SQ KK Sbjct: 197 TRLTTQQYAVLYVARAGVEQDMKHVDLAMMDLEEAIKLDPSQTEAYLIRGQIYLSQKKKE 256 Query: 278 KAEVILEKI 286 A+ EK Sbjct: 257 LAKRDFEKA 265 >gi|209528249|ref|ZP_03276714.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209491321|gb|EDZ91711.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 915 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 63/222 (28%), Gaps = 30/222 (13%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L M +Y N+ + Y QI ++ A + + + Y Sbjct: 51 GQLMAAMSAYTKAFELAPNQAISYAYLAQIYRNMGWFDEAISFYQQAIDLSPNWADLHYH 110 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G++ A KA+ ++P + + + AI L Q N Sbjct: 111 LGSALHWQGNIEGAIGCYEKAIALNPKLGQAYLDMGLRLNERGDIDTAIKVLQQGGINCP 170 Query: 220 EWNRN---------------RAILLIARSLEN---------------ADKGDMIASYHDA 249 + AI + +L +G + + Sbjct: 171 NFKEIFNTLGYLQLQQNQIDEAIAIFQEALNIDPTEPLVYNNLGWAWTYQGKLSEAIAAY 230 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++ L + +A K +N R+A +K + P Sbjct: 231 QKAISLKPDLAIAYSNLGKLWQQKNNHRQAISYFQKAIAIEP 272 >gi|218247729|ref|YP_002373100.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 8801] gi|218168207|gb|ACK66944.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801] Length = 249 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 11/162 (6%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ AI + KN N R ++ G + D +SL L Sbjct: 70 KSRQGDYQGAIADFTEALKNNP----NDINAYYNRGFAYSNLGKFDLALADFSQSLILDP 125 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 + A + + ++A + K+NP H + Y +L + K Sbjct: 126 KMVEAYVNRGNVYLQLGDDKEAIANYLEALKLNPNDAFAHNNLGLAYLNLGQADLAQ--K 183 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 I+ + E+ ++G +A A A +I Sbjct: 184 DFSEAIIIDPQYGEAYFNRGLAFSDLGQTKKARADFQKAAEI 225 >gi|320591103|gb|EFX03542.1| mRNA splicing factor [Grosmannia clavigera kw1407] Length = 928 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 6/206 (2%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E G L+ A+R +A +P+ + A V+ RA L ++NA Sbjct: 599 LAKERLAAGHLDEARRVLGRAFSQNPNNEDIWLAAVKLEAENGFVDRARELLATARENAP 658 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRK 278 ++ R ++ G A+ E+L+L + + + + + Sbjct: 659 TDRVWMRSVVFER--QHGADGGSEAALTLVQEALQLFPGAAKLWMLKGQIYAEDLGRVAE 716 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN---KESVESLVIVSKIA 335 A K P + L E +K L+ S E + +I Sbjct: 717 ARAAYAAGVKAVPGSVALWLLLARLEEAAGAVVKARSVLDRGRQAVPRSPELWCELVRIE 776 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIF 361 G++ QA A A++ PR + Sbjct: 777 RRAGNVAQARALMATALRQMPRSGLL 802 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 56/149 (37%), Gaps = 7/149 (4%) Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + E+ ++G + +L++ NS + AA+ S + +LE+ + PH Sbjct: 532 ARESTNRGRYATARAIYGHALQVFVNSRTLWLAAAELERSHGSREAQFGVLERAVEAVPH 591 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 E +A + ++ R N + + + K+ E G +D+A Sbjct: 592 SEVLWMMLAKERLAAGHLDEARRV--LGRAFSQNPNNEDIWLAAVKLEAENGFVDRAREL 649 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 A + AP +++ E+ + + Sbjct: 650 LATARENAPTDRVWMRSVVFERQHGADGG 678 >gi|320106192|ref|YP_004181782.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis SP1PR4] gi|319924713|gb|ADV81788.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus saanensis SP1PR4] Length = 687 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 38/141 (26%), Gaps = 11/141 (7%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A E L I A L G ++ A + + + P + + Sbjct: 252 AAEAYRRALDIENDNLDAQRGLANALLADGQMDKALKQFEEIVAAEPQDAQSYVRIAEIQ 311 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + A+ L + K + ++ + + E+ K + Sbjct: 312 RREGHYDEALVTLKKAKALVPDSEEL-----------TFNEALTLDALGRYDEAEKALTD 360 Query: 259 SIMASICAAKSLISQNKKRKA 279 + A+ S + +A Sbjct: 361 RLTAAAKTDNSYTDAERSNRA 381 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 61/177 (34%), Gaps = 15/177 (8%) Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 ++ ++ A + + + + +L +S A+ + Sbjct: 44 RSGSYYHYGLAKIYEDLATSQGRSDYATQAIEEYKLALTADPDSTYLQDGMAELYFKVGR 103 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLSE---NTVGKL-----KRALRLEEINK 322 R+A + + K NP H +A IY L + ++ L + Sbjct: 104 IREAVQVSQDQIKKNPNDIEAHTLLARIYYRSLGNLQNSAQTQMVQLATAEYETLVRLQP 163 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKI 378 ++VE+ +++ ++ +A + A + +E L +A++ + + ++ Sbjct: 164 DNVENHLLLGQLYEIAHDSVKAEVQFKAAQGLDSNSEEALLNMARL-YSEQGDIQRV 219 >gi|257060651|ref|YP_003138539.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802] gi|256590817|gb|ACV01704.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8802] Length = 1252 Score = 44.5 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 94/263 (35%), Gaps = 31/263 (11%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 A E +L ++Y L + +IG+ + A++ L + P + Sbjct: 638 ANDLTGAKEAYNRILAREPKHPDSLYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWM 697 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ Y K++S+AI Q E N + L+ + + ++ Sbjct: 698 SLGNLYQEKKQFSQAINAYQQAL--LLEPNLVAVYNNLGYVLQQ--QSQWEEAISCYQKA 753 Query: 253 LKLCDNSIMASICAAKSLISQNK------KRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 L++ N + A I A L SQNK + A++ L+ K +A Sbjct: 754 LEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA-------- 805 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLA 365 ++ + ++ ES E + + G +++A A A+ + P++ + L Sbjct: 806 ----IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861 Query: 366 QIEQANSHNTDKILYWTQSALHA 388 QI Q + + A A Sbjct: 862 QIYQVQNQ--------LKKASSA 876 >gi|326431599|gb|EGD77169.1| crooked neck protein [Salpingoeca sp. ATCC 50818] Length = 732 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 33/283 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFA 156 I AR ++ + N L+ Q +++Y A + L Sbjct: 219 GEIDKARSVYERAVEFFGEDNISPELLVSFAQFEERQKEYERARTIYKYGLDRIPKEAA- 277 Query: 157 VYSLYFES----CRIGDLNS---------AQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 L+ + GD +Y K ++ +P ++ + + Sbjct: 278 -RELFDAFTAFEKKYGDRKGVDSVILNKRQFQY-EKEVEENPHNYDAWFDYIRLAESSGD 335 Query: 204 WSRAITFLNQK-----KKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCD 257 +A + K + R L I ++ E D DM + + L Sbjct: 336 VDKARDVYERAIANVPLVAEKRYWRRYIYLWIYYAVFEELDAKDMERTRAVYKACIDLIP 395 Query: 258 ----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + AA+ I Q + A +L + + P ++ Y + E + + R Sbjct: 396 HKSFTFAKIWLLAAQFEIRQKRISSARKLLGRAIGMCPKDKLFKGYIEI--ELQLREFDR 453 Query: 314 ALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L E N + ++ +++ +G ++A LA+ Sbjct: 454 CRTLYDKYLEFNASNCQTWTRYAELETVLGDEERARGIYELAV 496 >gi|255035498|ref|YP_003086119.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254948254|gb|ACT92954.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] Length = 1072 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 88/277 (31%), Gaps = 28/277 (10%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L L+S + A ++ +H N + A ++ + +L Sbjct: 452 LDRPLLSADKQDFHSAERLFELAEDEHAMRN-----------------FEGARQRYQAVL 494 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + AT A+ L R G+ +A K + + + + ++A Sbjct: 495 EKEATHSGALIRLAEYHYRKGEYAQGLDFARKVMAENTYHGGANYLYGALHRKLGDLTKA 554 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 L+ + R+ + K D + DA ++L N++ A Sbjct: 555 EEALSVAAWTME----YRSGAYTQLAGIALQKNDFEKAESDARKALDYNRNNLAAYQLLG 610 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEEINKESV- 325 +L NK +A + WK + + Y H + RA + I E Sbjct: 611 TALRKLNKPEQA----IETWKALLAIDPLSHYAHFEQYLLDPRQANRATFQDAIRNELPH 666 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 E+ + ++ + G +A LA P +L Sbjct: 667 ETYLELAMDYVNQGQNAEAKQLLALAPAY-PTVSYWL 702 >gi|259907716|ref|YP_002648072.1| Probable fimbrial biogenesis protein [Erwinia pyrifoliae Ep1/96] gi|224963338|emb|CAX54823.1| Probable fimbrial biogenesis protein [Erwinia pyrifoliae Ep1/96] gi|283477570|emb|CAY73486.1| Uncharacterized protein HI0366 precursor [Erwinia pyrifoliae DSM 12163] Length = 243 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 58/164 (35%), Gaps = 7/164 (4%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 L++ + A L + Q P + ++ + GD + A+ + +AL +P Sbjct: 36 AYLSKGNMDAARRNLQRALSQAPDDYRVQL-AMARYQQQTGDRSRAEHHYHRALAQAPSN 94 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +V ++ A + +K++ R ++ + G + Sbjct: 95 GYVLNNYGAFLCGLGQYDAAQRQFSLARKDSANGLRADSVENSGYC--FLNAGQQEKARQ 152 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290 +++++ A++ K R++ +L +++ N Sbjct: 153 ALVDAVQTDPT--KGLPMLAEAARRLGKGRRSESRLLLDVYQHN 194 >gi|156086974|ref|XP_001610894.1| u5 snRNP-associated subunit, putaitve [Babesia bovis T2Bo] gi|154798147|gb|EDO07326.1| u5 snRNP-associated subunit, putaitve [Babesia bovis] Length = 1040 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 86/224 (38%), Gaps = 26/224 (11%) Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A++ + +P+ W+ A +++ + S A + + K +R Sbjct: 299 DIKKARKLLKSVIATNPNHAPGWIAAARIEELA--GKISSAREII--AQACEKCGDREDV 354 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L AR + +++++ S+ + AA+ + N KR IL K Sbjct: 355 WLEAARL------EKPEYAKAVLAKAVRMVPQSVKIWVEAARRESNVNDKR---RILRKA 405 Query: 287 WKVNPHP-EIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + L E + LKRA E +SV+ + ++++ S +A Sbjct: 406 LEFIPNSVRLWKDAISLEDETDAYVMLKRA---VECVPDSVDLWLALARLC----SYQEA 458 Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALH 387 A K P +I++ A++E++ + N + L Sbjct: 459 QKVLNEARKHLPTNADIWITAAKLEES-NGNQQMVEKIISRGLD 501 >gi|116071802|ref|ZP_01469070.1| TPR repeat [Synechococcus sp. BL107] gi|116065425|gb|EAU71183.1| TPR repeat [Synechococcus sp. BL107] Length = 293 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 76/197 (38%), Gaps = 8/197 (4%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EW 221 + ++G A + A A+ ++P+ + + + + + + A L + KK Sbjct: 55 QLLQMGQPKEAAQLAALAVRLNPNDERLWTVLAEAQLRSHQLDDASQSLAKAKKINPNNA 114 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKA 279 A IA + ++ + I++ + A I K I+ KA Sbjct: 115 GLWFAEAAIALRAQQPEEAIPLIQRGLQIDANNAAAYFDLGNARIMQNKFAIALQSFEKA 174 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 I + W+ + + ++ + + + +R L+LE+ + E ++ ++ + G Sbjct: 175 TEIKPEFWEALNNQAL-VLFELGEHDEAIRRWRRVLKLEQ----NAEPMLALAAALHQKG 229 Query: 340 SIDQAHAKAMLAMKIAP 356 ++A + A A+ P Sbjct: 230 DENEALSLAKEALSKNP 246 >gi|325108079|ref|YP_004269147.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324968347|gb|ADY59125.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 693 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 15/179 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G ++ A N A+K V QQ + L +A ++ Y+IA L+I Sbjct: 70 GEAALKAGNFREAKKQFQKVVQQDPNNATAHHRL--AYLADMDKDYSIAEIHYLAALRIE 127 Query: 151 ATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 L E R D +RY KAL P+ + + + +++ Sbjct: 128 PKNADIACDLGYSYLLQE--RSDDS---RRYLEKALRFDPNHHYAKMNLATLHSQQGDYA 182 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA--RSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A+ L Q + + ++ A+ I+ ++ KL S A Sbjct: 183 AAMAMLRQAVSEEEAQAHIAQLFPDGPPEGMQVANNTPEISPATRELQ-QKLAQRSGPA 240 >gi|299117455|emb|CBN73958.1| kinesin light chain-like protein [Ectocarpus siliculosus] Length = 846 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 49/276 (17%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPA--------TREFAVYSLYFESCRIGDLNSAQRYAT 178 A+ + A + L I T ++++ L + G + A+ Sbjct: 377 AMSWQAQGKLMEAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARGRFDEAETLFR 436 Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK---------KKNAKEW 221 +AL I P+ ++ + A + ++ + Sbjct: 437 EALGINERAHGNRHPEVASCLNSLAALLQARGSYDEAEILFTRALEVDEACFGLEHPRVA 496 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRK 278 + + ++ ++ D + S + + A ++Q K + Sbjct: 497 AGLHNLAALLQAQGKHEEADRLQSRALKTWEREYGPEHPKLAAFLNNQATLRLAQGKPDE 556 Query: 279 AEV-------ILEKIWKVNPHPEIAN--------IYTHLLSENTVGKLKRALRLEE--IN 321 AE I+EK + HPEIA ++ + +RAL++ E Sbjct: 557 AEKLGLRALSIVEKAYGPV-HPEIATCLNNLSALLHARRRDDEAEPLCRRALQISEQIYG 615 Query: 322 KESVESLVIVSKIAL---EMGSIDQAHAKAMLAMKI 354 + ++ +A G ++A A+ I Sbjct: 616 SNHPKIATCLNNLATQVQARGEFEEAEEMFTRALDI 651 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 46/169 (27%), Gaps = 31/169 (18%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA---------VYSLYFESCRIGDLN 171 L LL Q + + A ++I T + +L GD + Sbjct: 670 LAGLLRCQ-----GKLDEAEPLYRKAVEIGET-VLGPDHPDLATWLNNLATLVRDRGDPD 723 Query: 172 SAQRYATKALD-----ISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKKKNAKEWNR 223 +A+ +AL + P P + V+ + A + + + Sbjct: 724 AAEPLQRRALAIGEKVLGPAHPDLGAQVINLASLLSAQGKTEEAERLFIRGLATLEAAHG 783 Query: 224 NR----AILLIARSLENADKGDMIASYHDAIESLKLCDNSI----MASI 264 A +L + +G + +L + ++ Sbjct: 784 PEHPDVAAVLSHYASMLHQEGRDAEAKELIKRALATVERFFGPSHPIAV 832 >gi|121702613|ref|XP_001269571.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1] gi|119397714|gb|EAW08145.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1] Length = 540 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 85/260 (32%), Gaps = 35/260 (13%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 L + +S + + ++ + + A + L+M L + Sbjct: 212 ENSLRKAQDIAISMLRENNQDPDALMIRARAFYGLGDSDQALKLLKMCLGLDP------- 264 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 D+ SA R ++ A A+++ +AI ++ Sbjct: 265 ----------DMKSAIRLLRTVQKLTRTKEEGNNAF-----KARDYRKAIELWSEALAVD 309 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A +L R+ + + + +D E+LKL + I A AK+ + Sbjct: 310 PQNKDMNAKILQNRAQAYINLKEYDNAINDCSEALKLDPSYIKAQKMRAKAYGGAGNWEE 369 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A + + + NP + +++RA E+ K + + ++ + Sbjct: 370 AVREYKAVAEANP-----------TEKGIAEEIRRAEF--ELKKAQRKDYYKILGVSKDA 416 Query: 339 GSIDQAHAKAMLAMKIAPRK 358 D A +A++ P K Sbjct: 417 SEQDIKKAYRKMAIQYHPDK 436 Score = 37.2 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 4/84 (4%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++RAI + + ++ L R+ + + DA +L+L + Sbjct: 60 KDGNYNRAIEEFTKAIEINPSS----SVYLSNRAAAYLSANRYLEALEDAERALELDPTN 115 Query: 260 IMASICAAKSLISQNKKRKAEVIL 283 A+ L + + +A +L Sbjct: 116 SKIMYRLARILTALGRPAEALEVL 139 >gi|187925002|ref|YP_001896644.1| hypothetical protein Bphyt_3028 [Burkholderia phytofirmans PsJN] gi|187716196|gb|ACD17420.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN] Length = 620 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 22/220 (10%), Positives = 57/220 (25%), Gaps = 11/220 (5%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A ++ A + E L++ + + +G A + +++ P Sbjct: 117 AYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHA 176 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + AI + + G + Sbjct: 177 GALNNMGMSLNALGRAEEAIPCFQTALAAEPRF----VAAHFNLANTFDATGRHAEAVAS 232 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLL 303 +L L N A +L + + +A LE+ ++P +A + L Sbjct: 233 FKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALG 292 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + + + + + + + + L + Sbjct: 293 AHGPAVRA--LDQALRLRPDLASAHMNRALAWLAQRDFAR 330 >gi|332298474|ref|YP_004440396.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema brennaborense DSM 12168] gi|332181577|gb|AEE17265.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema brennaborense DSM 12168] Length = 705 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 4/165 (2%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A A L + ++ +L GD +A A + P Sbjct: 530 ALTLEASGDVTGAIPVYREALALDPKHVRSLINLGVIFLDSGDTETALSLLQSAAALEPS 589 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + Y+ K+++ A+T+ + K + N RA + A D + Sbjct: 590 NFEANNNLANAYLAQKKYTDAVTYFQKALKLDSKNNTVRA----NLAAAYASAEDYTNAQ 645 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +E +K + + A AK + + AE L + + NP Sbjct: 646 TVYLEVVKADNKNWDACFDLAKVYTALHDTAGAEKWLVYLQEKNP 690 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 58/170 (34%), Gaps = 4/170 (2%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YL ++ + N A +L++ A A+ L G+ A+ Y KAL Sbjct: 423 AYLEMARLLTQKNDTNGAVVAYREVLKLDAANGNALRELAAVYASAGNDKEAESYFKKAL 482 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +SP+ V + + A+++ + N ++ +L GD Sbjct: 483 ALSPEDALTNYNVSTVLFNQGKTAEAVSYAKKAYA----GNGKNVSIVYNYALTLEASGD 538 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + E+L L + + I + A +L+ + P Sbjct: 539 VTGAIPVYREALALDPKHVRSLINLGVIFLDSGDTETALSLLQSAAALEP 588 >gi|289662748|ref|ZP_06484329.1| histidine kinase-response regulator hybrid protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 653 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 18/203 (8%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P T V + S GD+ + A I P P V A ++ + A+ Sbjct: 70 RTLRAEPRTSLLPVVHVSAASIATGDMITGLEAGADAYLIHPVDPNVLVATLRTLLRARR 129 Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ + + + A L + + A+ AI + L Sbjct: 130 AEEALRISEARFREIFEHISAPIAVVDANLHTHEANAAFQRLVGNATPGAAIHAAGLDQA 189 Query: 259 SIMASICAAKSLISQNKKRKAEVIL------EKIWKVNPH--PEIANIYTHLLSENTVGK 310 S + ++ A L + + A +L E W+V+P+ P++ + + T + Sbjct: 190 STVHALTTA--LAQRERWSGALTLLRDGKLCETEWRVSPYREPDLGLLMVE---DVTEQR 244 Query: 311 LKRALRLEEINKESVESLVIVSK 333 L+ + +E++ + E +++ Sbjct: 245 LREREQRQELDTATSELAHQIAQ 267 >gi|283850989|ref|ZP_06368274.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] gi|283573635|gb|EFC21610.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] Length = 209 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 65/168 (38%), Gaps = 6/168 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 +A+ + A + ++ + L + G+L++ + KA P Sbjct: 35 AYVAKGRLIEAEAEFLQAVECSPSLAEGYVQLGGLAMNKGNLDACLEWNEKACRARPLFA 94 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ E +A L + K ++ + A L A KGD+ A+ Sbjct: 95 VPYGNIGFVHLQRGEVDKAEKALRRAVKIDPKYVQALATLGSA----LFMKGDIDAAEFQ 150 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV--NPHPE 294 + ++L++ N A A + + +KA+ ++++ + PHP+ Sbjct: 151 STKALEIEPNFGPAINNLALVAMERGDFQKAKELMDRSRETGYEPHPD 198 >gi|225559693|gb|EEH07975.1| pre-mRNA-splicing factor CLF1 [Ajellomyces capsulatus G186AR] Length = 640 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185 A + + ++P ++ A++ Y + GD +Y + + +P Sbjct: 222 ERARAIYKYALDRLPRSKSIALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQVKENP 280 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239 + V+ + + R + R L I +L E + Sbjct: 281 KNYDIWFDFVRLEESSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELET 340 Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 DM + E +KL + A+ I Q + A L P ++ Sbjct: 341 KDMDRARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQTARKTLGHAIGACPKDKL 400 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y + E + K + + N + ++ + +++ + ID+A A L + Sbjct: 401 FKGYIDIERQLFEFVRCR-KLFEKQIKWNPANCQAWIKFAELERGLDDIDRARAIYELGI 459 >gi|298527727|ref|ZP_07015131.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511379|gb|EFI35281.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] Length = 794 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 63/157 (40%), Gaps = 10/157 (6%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R A +++ + + + + +L++ + A + + Q R + Sbjct: 26 ERRDAY--YQKAVTHFEGERYSLAEVEIRNALRIDPDFAKAQLLLGRVYFVQKNWRSSYA 83 Query: 282 ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L ++P H + IY H+ E+ + K L LE + + ++ +I++ + + Sbjct: 84 ALNSAVDLDPDLLEAHLYLGRIY-HMAGESEQAEEKARLVLER-DPGNADAGIIMATVMI 141 Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372 G ++ + P R+E ++LL+++ + Sbjct: 142 RQGELEAGRMSLEEIIAAHPDREEPYILLSRVLAGQN 178 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 110/376 (29%), Gaps = 51/376 (13%) Query: 57 LLFAVSRFFLSCPAMLFHMLHK-RNYDKGYKALYTGLM--SIAAHNIPLARKMHSYVSQQ 113 LL A + F + P M L GY L + + A + V Sbjct: 409 LLLARAHFQNNEPLMAVEYLRGVSRSSPGYARARQELAEHHLGQGDHLRALQEIDRVLSA 468 Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + + + + ++A E+ ++LQ Y L G+ A Sbjct: 469 DPGNMPA--RIQRGDVLAMKGDASLAAEEYSLLLQDEEWAGTGHYKLGVLEASRGNFALA 526 Query: 174 QRYATKALDISP-----------------DAPWVTEAVVQQYVLAKEWSRAITFLNQKK- 215 + KAL SP V + + L+ Sbjct: 527 HSHLEKALARSPLNQQVLQARVMVDLSQNRVEEAGTYVQELRAEHPG-EAFLALLHGDVY 585 Query: 216 KNAKEWNRNRAILLIARSLEN-------------ADKGDMIASYHDAIESLKLCDNSIMA 262 ++ R + +A S+E A+ + ++L L SI Sbjct: 586 LAGQDPVMAREMFALAASMEPEWMVPWTRKATLDAEAKNWKPGIAALEKALLLEPESIQV 645 Query: 263 SICAAKSLISQNKKRKAEV----ILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRAL 315 +K AE ILE+ W +A +Y S + KL++AL Sbjct: 646 GFMLGTFYEQAGQKDMAEKQYAAILERDPGFWPAAN--NLAFMYA---SSSEEQKLQKAL 700 Query: 316 RLE--EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 L ++L + +G++D A K LA + P+ + A Sbjct: 701 ELASKAAKSNHPQALDTLGWTHYRLGNLDMALEKLDLARQGDPQNLDIAYHLAVVLAEIG 760 Query: 374 NTDKILYWTQSALHAM 389 + L + A+ + Sbjct: 761 DRVGALGVLEQAMSSP 776 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 27/258 (10%), Positives = 72/258 (27%), Gaps = 9/258 (3%) Query: 104 RKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 + + L +L +I + A EK ++L+ A + Sbjct: 78 WRSSYAALNSAVDLDPDLLEAHLYLGRIYHMAGESEQAEEKARLVLERDPGNADAGIIMA 137 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 R G+L + + + + PD + + A+ L+ + + Sbjct: 138 TVMIRQGELEAGRMSLEEIIAAHPDREEPYILLSRVLAGQNLAGNAVDVLSAGLEVLPDN 197 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 L++A + D + + + + + + +A Sbjct: 198 R----TLMLAMAGVFESVQDYCGAEEEYRRIVAHDPGNGDMHLMLVHFFQRTGQVDEAMK 253 Query: 282 ILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + P + ++ ++ + + +++ L+M Sbjct: 254 EFQSLMLARPDDNRSYLGLGAMYMEESRFQDAVQVLEQGRAYLGGDYDLSFALAETYLDM 313 Query: 339 GSIDQAHAKAMLAMKIAP 356 G + A A +K P Sbjct: 314 GDVPAARAMLHEEIKRDP 331 >gi|209525653|ref|ZP_03274190.1| sulfotransferase [Arthrospira maxima CS-328] gi|209493822|gb|EDZ94140.1| sulfotransferase [Arthrospira maxima CS-328] Length = 729 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 52/165 (31%), Gaps = 9/165 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLL-----EVQIALAERQYNIAHEKLEMMLQIPATR 153 A + ++ Q ++ L +L + AL +Y A M+ Sbjct: 231 EAIAAYRKAIAINPQQPEAHQRLTEILSRDQKTGEDALLGGRYEEAIAIYRDMVAAKPDY 290 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + Y L + + A +A++++PD W + E +AI + Sbjct: 291 SWGYYGLGLALLNLRQWSEAIEVFNQAINLNPDCFWSYNNLGYCLFKQGEIPQAIDAYRK 350 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 E + I + D+ + ++++K + Sbjct: 351 AIAIDPEIPE----VYIRLGDTLLQQQDIDGAIAAYLDAIKAQPD 391 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 54/197 (27%), Gaps = 27/197 (13%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + G A + PD W + A++ +WS AI NQ Sbjct: 267 ALLGGRYEEAIAIYRDMVAAKPDYSWGYYGLGLALLNLR----QWSEAIEVFNQAINLNP 322 Query: 220 E---WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + N L + G++ + +++ + I +L+ Q Sbjct: 323 DCFWSYNNLGYCLFKQ-------GEIPQAIDAYRKAIAIDPEIPEVYIRLGDTLLQQQDI 375 Query: 277 RKAEVILEKIWKVNPHPEIANI---------YTHLLSENTVGKLKRALRLEEINKESVES 327 A K P EIA I + L E + E Sbjct: 376 DGAIAAYLDAIKAQPDGEIAYIKLRHLRTYSFIKLQPEQIEAIASGYQQAISQVPHYPEP 435 Query: 328 LVIVSKIALEMGSIDQA 344 + + E+G I A Sbjct: 436 YINYGDLLTEIGDISAA 452 >gi|171463927|ref|YP_001798040.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193465|gb|ACB44426.1| Tetratricopeptide TPR_2 repeat protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 403 Score = 44.5 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 85/279 (30%), Gaps = 40/279 (14%) Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102 + + L + + + +R+ L + R +K L L++ Sbjct: 4 IATAWLLLLPVMFGIGWLAARWDLRLENRMDERERMRQQRSTFKGLSL-LLNEQPDQAIE 62 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--------- 153 + + + + L L + + A + + + Sbjct: 63 TLVKIAQLDPETIELHFSLGNLFRRR-----GETERAIRVHQHLANRDDLKPRDRDHAAY 117 Query: 154 EFA---VY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-I 208 E + L+ + + +YA A E++++ Y + +W +A I Sbjct: 118 ELGRDFLRAGLFDRAEASLNRVGDGKYAEPA----------KESLLEMYQIEHDWKKAII 167 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + K + A E + D+ + +L+ N A I Sbjct: 168 AANELETLQGKSHHTEIAQFHCELGQEALRRKDLAEAEQSIQRALQAVPNHARALILQGD 227 Query: 269 SLISQNKKRKAEVILEKIWK--VNPHPEIANIYTHLLSE 305 L++ ++ +A + W + HP Y HLL++ Sbjct: 228 YLMAMDRPTQA----IEAWGLIASSHP----AYMHLLAD 258 >gi|329956615|ref|ZP_08297188.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] gi|328523987|gb|EGF51063.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] Length = 1010 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 99/282 (35%), Gaps = 46/282 (16%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREF--A 156 LA +M + + + + L Y + + + + + A E + P A Sbjct: 722 AALAAQMPGVIRFEPS-EQDSLTY-IAAEKVYMKGEISPARESFIRYLQSYPNGAFSLNA 779 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ 213 Y L D + + +K L+ PD+P+ EA++ + KE+ RA+ Q Sbjct: 780 HYYLSLIGKEQKDETAVLEHTSKLLE-YPDSPYSEEALLMRGEILFNHKEYERALADYKQ 838 Query: 214 KKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSL 270 + R + L ++ + D+ ++I + + KL A AK+ Sbjct: 839 LQARTTTAERRQLGLTGVLRCGVLLKDEIEVIQAATALLAEAKLSPELQHEALYYRAKAY 898 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++Q +KA L+ +L+++T L E+ + Sbjct: 899 LNQKAVKKAADDLK-----------------ILAQDT-------RTLYG-----AEAKYL 929 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQI 367 +++ G A + + + + F+LL+ + Sbjct: 930 AAQLMYNAGDYAAAEKEILNFIDQSTPHAYWLARSFILLSDV 971 >gi|300937601|ref|ZP_07152410.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] gi|300457331|gb|EFK20824.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] Length = 889 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 106/352 (30%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 230 WLAIQQGDAALKANNPDQAERLFLQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 287 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + + +A Sbjct: 288 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLSQQAE 347 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 348 ALENQGKWAQAAALQRQRLALDPGSVWVTYRLSQDLWQAGQRTQADTLMRNLAQQKPNDP 407 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 ++ + + +A ++ + +L + I + A L Sbjct: 408 DQVYAYGLYLSGHDQERAALAHINNLPRARWNGNIQELVNRLQSDQI---LETANRLRDS 464 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K++ AE +L + P P ++ + + T + L + +++ Sbjct: 465 GKEQDAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARTAYQNVLAR-ESNNADAI 518 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 519 LGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALVQAQLGDTAAAQQ 570 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + + L A R Y A + +L + A+ L Sbjct: 462 RDSGKEQDAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARTAYQNVLARESNNADAILGL 521 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 522 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALVQAQLGDTAAAQQTFNRLILQAKS 581 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A G+ + +++ Sbjct: 582 QPPSMESAMVLRDGAKFEAQAGEPQQALETYKDAM 616 >gi|73544337|ref|XP_848063.1| hypothetical protein [Leishmania major strain Friedlin] gi|321438417|emb|CBZ12171.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1419 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 59/202 (29%), Gaps = 23/202 (11%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRN 224 D A +A + P V E V +V + ++++ + A E + Sbjct: 962 DPELAATLYERAAAVCPTYLEVAEVVADVFVQSGDYAKGSVYMKRVMRANPSAATEMHMR 1021 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + + + G + ++ L + + A+ AA A V++ Sbjct: 1022 LARIGTGSAWDTMSHGQRMEVMEHLLKGLGVAPERV-AAALAAGVQSELTNTNNANVVMS 1080 Query: 285 KIWKVNPHPEIANIYTHLLSENT--------------VGKLKRALRLEEIN-KESVESLV 329 N P + + SE+ L R R + + LV Sbjct: 1081 ---LGNLAPLLLDGVATATSEDAVCFATYVVQTRFQEPQLLNRMYRRALLRFPQHATILV 1137 Query: 330 IVSKIALEMGSIDQAHAKAMLA 351 + + + G A A Sbjct: 1138 NYATLCMHSGCHTLARKYIAKA 1159 >gi|67526379|ref|XP_661251.1| hypothetical protein AN3647.2 [Aspergillus nidulans FGSC A4] gi|40740665|gb|EAA59855.1| hypothetical protein AN3647.2 [Aspergillus nidulans FGSC A4] Length = 1357 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 26/177 (14%) Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + + SL +++I +E+G ID A + A+++ P I ++ +K Sbjct: 66 TSNSPAQLSSLNTIAEIYVELGEIDLARKHFLQAVELDPTGS-------IPESEGGGAEK 118 Query: 378 ILYWTQSALHAMPDPLWISDDGYLSSVWLPL-----SPISKTLCYFEWKIPTKSPEYISS 432 L W G S W PL S S F W+ +S Sbjct: 119 FL-WLAQLSE---------LGGKDSVQWSPLFFIAFSRASYQADIFRWEEDAESRCENLI 168 Query: 433 ENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFED--STIHPLDPHIRQPDDP 487 + + + + + +S + + P DPH+ PD P Sbjct: 169 TEALLVQPSSPEVLQTLASIRISQLREDDARAALSRSLELWKDLPPEDPHV--PDFP 223 >gi|124516587|gb|EAY58095.1| putative TPR-domain containing protein [Leptospirillum rubarum] Length = 327 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 11/211 (5%) Query: 160 LYFESCRI-GDLN--SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + R D A A+ L+ P + ++ +L + A+ + + Sbjct: 20 LVPQIQRSLEDREWLKAYHLASSMLEKYPSNETLRYLLLDALILGGRYDNALDRVREFLG 79 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E +R LL + + + ESL + + A SL + Sbjct: 80 AMPENHRLNLYLLHLLVYHKSFEEALALGKSLLKESLTSMEKRD-VLLHTAFSLHGTGEL 138 Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 RKA +L ++ +P + + + IY + L L E++ ++ Sbjct: 139 RKAVRMLNELLDEDPLNTDALETLGKIYFEQGHFEEAERY--FLELAEMDPAHPRVHQLL 196 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + E G D+A + AM+IAP E+ Sbjct: 197 GLLYSEQGKWDEAIMEWEEAMEIAPSDEVLR 227 >gi|323449116|gb|EGB05007.1| hypothetical protein AURANDRAFT_72389 [Aureococcus anophagefferens] Length = 1474 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 119/386 (30%), Gaps = 74/386 (19%) Query: 72 LFHMLHKRNYDKGYK------ALYT-GLMSIAAHNIPLARKMHSYV----SQQHTFHNE- 119 L L + + G AL G++ + N R + +++ + Sbjct: 823 LERALAIKEREYGRDHALVASALTNLGIVHGSLGNYAKQRDLSERALVIFEREYGRDHPN 882 Query: 120 ---YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA---------VYSLYFESCRI 167 L L +L + + L I R F + L + Sbjct: 883 VASALANLGSAHGSL--GDDAKKRDLFQRALAIDE-RVFGSEHTAVAATLGGLGNAFFSL 939 Query: 168 GDLNSAQRYATKALDIS-----PDAPWVTEAVVQQYVL---AKEWSRAITFLNQKKKNA- 218 GD A+ +AL I D V + + ++++A + Sbjct: 940 GDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAFFSLGDYAKARELYERALAIKE 999 Query: 219 KEWNRNR---AILLIARSLENADKGDMIASYH-----DAIESLKLCDNSIMASICAAKS- 269 +E+ R+ A L + + D GD AIE + + + +I Sbjct: 1000 REYGRDHVQVASTLTNLGIAHGDLGDYAKKRELLERALAIEEREYGRDHVQVAITLGNLG 1059 Query: 270 --LISQNKKRKAEVILEKIWKV------NPHPEIANIYTHL------LSENTVGKLKRAL 315 S KA + E+ + H ++A+ T+L L + + Sbjct: 1060 NAFFSLGDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAHGDLGDYAKARELYER 1119 Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHA-----KAMLAMKIAPR----KEIFL 362 L E ++ V+ ++ + L G + +A K LA+K + L Sbjct: 1120 ALAIEEREYGRDHVQVASTLNNLGLAHGDLGEAAKACDLYKRALAIKEREYGRDHASVAL 1179 Query: 363 LLAQIEQA--NSHNTDKILYWTQSAL 386 L + +A ++ K ++ AL Sbjct: 1180 TLTNLGKACNALGDSTKARDLSERAL 1205 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 97/330 (29%), Gaps = 65/330 (19%) Query: 98 HNIPLARKMHSYVSQ--------QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 + AR+++ H L L +L Y A E E L I Sbjct: 940 GDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAFFSL--GDYAKARELYERALAI 997 Query: 150 PATREFA---------VYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPWVTEAVV 195 RE+ + +L +GD + +AL I D V + Sbjct: 998 KE-REYGRDHVQVASTLTNLGIAHGDLGDYAKKRELLERALAIEEREYGRDHVQVAITLG 1056 Query: 196 QQYVL---AKEWSRAITFLNQKKKNA-KEWNRNR---AILLIARSLENADKGDMIASYHD 248 ++++A + +E+ R+ A L L + D GD + Sbjct: 1057 NLGNAFFSLGDYAKARELYERALAIKEREYGRDHVQVASTLTNLGLAHGDLGDYAKAREL 1116 Query: 249 -----AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL- 302 AIE + + + + ++ +A ++ + Sbjct: 1117 YERALAIEEREYGRDHVQVASTLNNLGLAHGDLGEAAKAC----------DLYKRALAIK 1166 Query: 303 LSENTVGKLKRALRLEEINK------ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E AL L + K +S ++ + S+ AL + + A +A+ + Sbjct: 1167 EREYGRDHASVALTLTNLGKACNALGDSTKARDL-SERALAI--FELGSEHARVAITLDN 1223 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 ++ L + K + AL Sbjct: 1224 LGSAYIAL--------GDAAKARGLLERAL 1245 >gi|253999714|ref|YP_003051777.1| hypothetical protein Msip34_2008 [Methylovorus sp. SIP3-4] gi|253986393|gb|ACT51250.1| Tetratricopeptide domain protein [Methylovorus sp. SIP3-4] Length = 570 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 99/312 (31%), Gaps = 61/312 (19%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL------------LEVQIALAE-----RQ 135 ++ ++ + LA + + LV E Q A E + Sbjct: 76 LAKSSRDPRLAERAAKAA---VYGNKPRLVTQAVSLWSELDPSSTEAQQASTELFVNAGK 132 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 N A L+ +L TR L + D N+ + PD P + Sbjct: 133 LNEAKPFLQKLLAKEDTRANGFLYLNSLLAKQTDKNAVLTLVQELAAPYPDLPEAHFTIA 192 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + A + A++ L+ +K + W + LL + L I Y + + + Sbjct: 193 NSALAAGKVELAMSELDTAEKLSPGWE--MSALLKGQILYLQSPDAAINFYKQFLSANEN 250 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + + A+ LI+Q + + E + Sbjct: 251 ANEVR---LTMARLLINQKR-----------------------FDEAKPE--------FI 276 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK---IAPRKEIFLLLAQIEQANS 372 +L +K + E +V+V ++++ + A A+ P + +F+ L QI + Sbjct: 277 KLISASKNNPEIMVVVGLLSIQANELGDAEKYFQDALAAGFKNPDQ-VFIYLGQIAEKQ- 334 Query: 373 HNTDKILYWTQS 384 ++ L W Sbjct: 335 NDDKLALAWYNR 346 >gi|326665866|ref|XP_003198135.1| PREDICTED: dnaJ homolog subfamily C member 7-like [Danio rerio] Length = 516 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C ++ A ++ Sbjct: 208 KVLKAECLALLGRYPEAQSVASDILRMDSTNGDALYVRGLCLYYEDC----IDKAVQFFV 263 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 264 QALRMAPDHEKARLACRNAKALKAKKEEGNKAFKEGSYEEAYELYTEALTIDPNNIKTNA 323 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R+ + + + D +++KL + I A + A+ + + +A EK+ Sbjct: 324 KLYCNRATVGSKLNKLEQAIEDCTKAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDYEKV 383 Query: 287 WKVN 290 ++ Sbjct: 384 YQTE 387 >gi|149921781|ref|ZP_01910227.1| TPR domain protein [Plesiocystis pacifica SIR-1] gi|149817342|gb|EDM76816.1| TPR domain protein [Plesiocystis pacifica SIR-1] Length = 1013 Score = 44.5 bits (104), Expect = 0.037, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 91/310 (29%), Gaps = 56/310 (18%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ--YNIAHEKLEMMLQIP 150 ++ + P A + + L +I + A Sbjct: 269 IATTHPDDPQAVSAANKQIAELRLE------LQVARIQELQGGEPTPEAEAAYN------ 316 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 L + R G L++A+ +A+D SP P + + + + + A+ Sbjct: 317 -------RGL--SALRGGKLDTARAQLQQAVDESPWYPRAHYYLGEVHARQEHFPEAVES 367 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + L + E + D + +L+L + + + Sbjct: 368 FKRAIAMERYDYAAHMALGLLYKKEFSGAEDE-QARVHLDLALRLRPDLYVLHFHLGELY 426 Query: 271 ISQNK-------------------KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +K KR A + I + E A + + V +L Sbjct: 427 ARSDKEQAIGHFRRFRELCDADDPKRAAAK--DAILALQREVEEAEPFVPPPPPSNVDRL 484 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQA 370 A L + E+ V+ ++ G D+A + +K P + L +LAQ+ A Sbjct: 485 DPA--LYRLIS---EAYVLGAE----HGEWDRAEKLLINGLKQFPDETALLNILAQVVDA 535 Query: 371 NSHNTDKILY 380 + Sbjct: 536 Q-GEGGRARA 544 >gi|332291876|ref|YP_004430485.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] gi|332169962|gb|AEE19217.1| Tetratricopeptide TPR_1 repeat-containing protein [Krokinobacter diaphorus 4H-3-7-5] Length = 460 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 20/183 (10%) Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----RSLE 235 LDI P+ V EA+ + + +++ A T + + ++ + A + + +L+ Sbjct: 108 LDIKPNDVDVLEALYEVHFQQQDYDAAATTVKKLIGFDVQYKEDLARIYTSTKRYEEALD 167 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE- 294 ++ D + LK +K + +E+ NP E Sbjct: 168 LIEELDDEIGSDIYRDRLK------------SKLYALSGNTNRQVKEIEQNIASNPKSEA 215 Query: 295 --IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + I + +T + AL L+++N + E + + K L G ID+A A + Sbjct: 216 EYLKLILLYSEQGDTQKAYETALELQKVNPYADEVHLALYKFNLNDGKIDEAIASMQKVL 275 Query: 353 KIA 355 + Sbjct: 276 EST 278 >gi|157812774|gb|ABV81132.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Triops longicaudatus] Length = 289 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVQEAEDCYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I ++GSI +A A+ Sbjct: 124 AYSNMGNTLKEMQDINGALQCYTRAIQINPAFADAHSNLASIHKDLGSIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A ++ + H + L L I + A L + A Sbjct: 34 GQVQEAEDCYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ + A+ + + Sbjct: 92 SNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDINGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G + + +LKL + A A L Sbjct: 152 NPAF----ADAHSNLASIHKDLGSIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 >gi|153871680|ref|ZP_02000790.1| TPR repeat containing protein [Beggiatoa sp. PS] gi|152071852|gb|EDN69208.1| TPR repeat containing protein [Beggiatoa sp. PS] Length = 658 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 13/186 (6%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +Y A + + ++ T +Y R+ A Y KAL+I P W + Sbjct: 440 EYETAMVQYQKATELQPTNSLYLYRTCTALDRLTRYEEAIPYCKKALEIKPTHHWTQIRL 499 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + ++ A K+ + +A L + +++ Sbjct: 500 AHGLLQIHQYQEAFKHCESVLKSESVTTQAKAGAFAISGLAQIGLNRPEIAIERCQIAIQ 559 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 L A C L Q K +A E+ L ENT+ K A Sbjct: 560 LSPQEDWAYWCLGDVLSLQEKFGEAAKQYEQA-------------VKLKPENTLYNDKWA 606 Query: 315 LRLEEI 320 L ++ Sbjct: 607 QTLAQL 612 >gi|313668665|ref|YP_004048949.1| periplasmic protein [Neisseria lactamica ST-640] gi|313006127|emb|CBN87588.1| putative periplasmic protein [Neisseria lactamica 020-06] Length = 614 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 98/323 (30%), Gaps = 79/323 (24%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 72 LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184 Query: 237 ADKGDMIASY-----------------------------HDAIESL----KLCDNSIMAS 263 D AS AI +L KL + + Sbjct: 185 QDGLAQKASKAVRRASLEYGHLPEAAVADVVFSLQAREKEKAIAALQRLSKLDAEILPPT 244 Query: 264 ICAAKSLISQ-----------NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 A + Q R L W+ EI N+ + ++ +LK Sbjct: 245 FIALRLTARQYPEILDGFFQQTDTRN----LSSAWQEM---EIMNLVSLRRPDDAYKRLK 297 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQ 366 L + N + + + A+ + + + ++ A ++ L A Sbjct: 298 ---VLLDANPNAD----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAA 350 Query: 367 IEQANSHNTDKILYWTQSALHAM 389 + A+ + K+ W + + A Sbjct: 351 MMYADRRDYTKVRQWLKK-VSAP 372 >gi|301163724|emb|CBW23278.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 478 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 18/205 (8%) Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A K +D +P P WV A + K++ +AI + +E+ A + Sbjct: 188 EQAIVVFNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAIESCDFAIAADEEFG--EAHI 243 Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNS----IMASICAAKSLISQNKK-RKAEVI 282 + A SL + + + I Y A++ L I + ++ N+ A Sbjct: 244 IKAHSLFHLENIEGAIVEYRKALKYKTLSPEFTYMFIGLAYTQQENWAEANESYSMALRA 303 Query: 283 LEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEE-INKESVESLVIVSKIALE 337 +E+ P +++IY++ + + R RL + + + E ++ +I +E Sbjct: 304 IEEN-GNGSSPLLSDIYSNKALCASRQGDSEEAHRLCRLAKELAPQDAEPYLLEGRIYME 362 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362 + D A A+ LA++ AP + ++ Sbjct: 363 EDNFDLARAEWALALRYAPEADTWM 387 >gi|289678286|ref|ZP_06499176.1| peptidase aspartic, active site [Pseudomonas syringae pv. syringae FF5] Length = 513 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 17/208 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 190 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 245 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A LL+ R GD + D ++ + ++ A + + +A L Sbjct: 246 NDATLLVQRGQMRQRLGDQDGARQDFAQA--MAVGNLPLRE-QASLYAAMGQPSEALQRL 302 Query: 284 EKIWKV---NPHPEIANIYTHLLSEN---TVGKLKRALRLEEINK----ESVESLVIVSK 333 ++ P E+ Y + + + KR R + ++ S + S Sbjct: 303 QQARDAGQLQPGDEVQIAYFLSQAGDDQGALDTFKRVDRQSGLKPREVQDAAYSAMRTSN 362 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIF 361 A + + P +++F Sbjct: 363 DAQAIAYFKRVLDYQQTGDLQMPAQQVF 390 Score = 37.2 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 64/216 (29%), Gaps = 25/216 (11%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L +L TG ++A + A + Y L+ Sbjct: 162 LGPQQVLTRRRQAIQEQVAVDKASTGYKALARGDNDTAVSEAREAVRSFPKQMAYRKLLV 221 Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 IA QY A + AT + R+GD + A++ +A+ Sbjct: 222 SALIAQ--GQYAEARSAATEALALNGNDAT-LLVQRGQMRQ--RLGDQDGARQDFAQAMA 276 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIAR-----SL 234 + + P +A + Y + S A+ L Q + + A L +L Sbjct: 277 VG-NLPLREQASL--YAAMGQPSEALQRLQQARDAGQLQPGDEVQIAYFLSQAGDDQGAL 333 Query: 235 ENADKGD------MIASYHDAIESLKLCDNSIMASI 264 + + D A +++ +++ + Sbjct: 334 DTFKRVDRQSGLKPREVQDAAYSAMRTSNDAQAIAY 369 >gi|302404259|ref|XP_002999967.1| DnaJ and TPR domain-containing protein [Verticillium albo-atrum VaMs.102] gi|261361149|gb|EEY23577.1| DnaJ and TPR domain-containing protein [Verticillium albo-atrum VaMs.102] Length = 510 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 65/194 (33%), Gaps = 10/194 (5%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPA 151 +++AA A + S +S + + + LL Q L++ + + A + + Sbjct: 8 LAVAA--ALFATPLVSALSAESIPSDLPVSELLSSAQSHLSKGETSDALLYYDAAVARDP 65 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + + +G + A + L + PD + + + +W A Sbjct: 66 SNYLTFFKRATTYLSLGRTSQATEDYNRVLSLKPDFEGAHIQLAKIRARSADWEGAKE-- 123 Query: 212 NQKKKNAKEWNRNRAIL-----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + K N + A L + + GD H A E++ + ++ Sbjct: 124 HYKLANKDAASPELAALDEAQGAAQLARGRREGGDFETCVHQAGEAIMTANRAVYLRELR 183 Query: 267 AKSLISQNKKRKAE 280 ++ ++ + + Sbjct: 184 SRCRFARGEVEEGM 197 >gi|242076856|ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor] gi|241939547|gb|EES12692.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor] Length = 1069 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 7/165 (4%) Query: 127 VQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + ++ A + P L + GDL S+ K L++ Sbjct: 322 ARSYHSKGDIETAGRYYMASVNEISKPQDFVLPYIGLGQIQLKFGDLKSSLGSFEKVLEV 381 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ +A+ + + E +AI KK + ++A + + L +D + Sbjct: 382 HPENCESLKAIGHIHAKSGETEKAIETF--KKVTRIDPKDHQAFVELGELLVESDWAAAM 439 Query: 244 ASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI 286 A LK ++ + + + AE ++ Sbjct: 440 EYLKTARNLLKKAGEAVPVELLNGIGLLHFEKGEFEMAEQSFKEA 484 >gi|253702403|ref|YP_003023592.1| hypothetical protein GM21_3815 [Geobacter sp. M21] gi|251777253|gb|ACT19834.1| TPR repeat-containing protein [Geobacter sp. M21] Length = 399 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 6/195 (3%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL +GL + A + + YL A+ + + A + + Sbjct: 32 ALSSGLAFYQKKDYARATSELKRAISMDPTNTQAYKYL--AGAYQAQGKTDEAIKTYKYS 89 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L + T+ SL + N A+R A + P + Q YV + + Sbjct: 90 LALDPTQASVHTSLGNVYLQQKKYNLAEREFKDAGKLDPTDTLAPYTLGQLYVQTERYGE 149 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + + A L + E G + +++KL A Sbjct: 150 AEAQFKKVSRMAPTDPNPYYSLGAVYNKE----GKYADAVKQLTQAVKLRPKMEAAHFEL 205 Query: 267 AKSLISQNKKRKAEV 281 + + A+ Sbjct: 206 GVAYAALGDTTNAQK 220 Score = 36.8 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 50/148 (33%), Gaps = 7/148 (4%) Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + A ++ L K D + + ++ + + A A + +Q Sbjct: 18 LASQESQRAQLANGALSSGLAFYQKKDYARATSELKRAISMDPTNTQAYKYLAGAYQAQG 77 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 K +A + ++P H + N+Y N + +++ + Sbjct: 78 KTDEAIKTYKYSLALDPTQASVHTSLGNVYLQQKKYNLAER--EFKDAGKLDPTDTLAPY 135 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ ++ +A A+ ++AP Sbjct: 136 TLGQLYVQTERYGEAEAQFKKVSRMAPT 163 >gi|171318635|ref|ZP_02907781.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5] gi|171096143|gb|EDT41066.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5] Length = 607 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + A +A++ V + + L KN + NR A L IAR Sbjct: 169 ARELARATGETRGPAILALQALL---VRGADRVAGLAVLKDMLKN--DMNRPEAQLAIAR 223 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D + ++L++ + + A++ L +A I V + Sbjct: 224 --QQLAVDDKEGAARSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D A A Sbjct: 278 PKSRDGRLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDASAY 337 Query: 348 AMLAMKIAPRKE------IFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ ++ LAQI N + W Sbjct: 338 LKQYVQLGDKQSNLDVGQGYIYLAQI-SIEQGNDAQASQWLDK 379 >gi|303273688|ref|XP_003056197.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Micromonas pusilla CCMP1545] gi|226462281|gb|EEH59573.1| PsbB mRNA maturation factor Mbb1, chloroplast precursor [Micromonas pusilla CCMP1545] Length = 586 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 92/275 (33%), Gaps = 25/275 (9%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF-ESCRI-----GDLNSAQRY--AT 178 ++ A + + + Y ++ + G++ A++ A Sbjct: 176 ARVLRQLGDNEGARQCYQ-----DGCDATGGDNAYIWQAWAVLEDSVGNIAKARQLYDAA 230 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A D + A W ++++ + RA L + + E R L + + + Sbjct: 231 TAADKTHAAAWHAWGMLEK--NQGNFQRARDLLVKGVRLVPE-TRASPHLFQSLGVMAME 287 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVILEKIWKVNP-HPEI 295 + M + + + S A++ A +L+ + A + ++ + +P + I Sbjct: 288 RRRMQEAREHFMAGTRTDAGSQSAALWQAWALLESREGNSDIARKLFQRGLQSDPENRYI 347 Query: 296 ANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + E+ G + RA L ++N L ++++ G+I A Sbjct: 348 WLSWA--VHESRQGYVDRARSLLVKGCKLNPRDPPLLQALARLEAADGNISVARKLFEQG 405 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 K+ P + + + + + Q + Sbjct: 406 TKLDPLHQANWQAWALAEWKDGDVARARELLQRGI 440 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 81/251 (32%), Gaps = 14/251 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWV 190 A + + T A ++ G+ A+ K + + P +P + Sbjct: 218 GNIAKARQLYDAATAADKTHAAAWHAWGMLEKNQGNFQRARDLLVKGVRLVPETRASPHL 277 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 +++ + + A + + A L A +L + +G+ + Sbjct: 278 FQSLGVMAMERRRMQEAREHFMAGTRT--DAGSQSAALWQAWALLESREGNSDIARKLFQ 335 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSEN--- 306 L+ + + A Q +A +L K K+NP P + L + + Sbjct: 336 RGLQSDPENRYIWLSWAVHESRQGYVDRARSLLVKGCKLNPRDPPLLQALARLEAADGNI 395 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLA 365 +V + K + +++ + + + G + +A + ++PR L Sbjct: 396 SVAR-KLFEQGTKLDPLHQANWQAWALAEWKDGDVARARELLQRGIWVSPRSYNACRLFH 454 Query: 366 Q---IEQANSH 373 +E+ + Sbjct: 455 AWGVLEEREGN 465 >gi|218131427|ref|ZP_03460231.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697] gi|217986359|gb|EEC52696.1| hypothetical protein BACEGG_03045 [Bacteroides eggerthii DSM 20697] Length = 1010 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 92/282 (32%), Gaps = 46/282 (16%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF--A 156 LA +M + + + + L Y + + + + A LQ P A Sbjct: 722 AALAAQMPGAIRFEPS-EQDSLTY-IAAEKVYMKGELTPAKASFTRYLQSYPNGAFSLNA 779 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ 213 Y L D + +A K L+ PD+P+ EA++ + KE+ +A+ Q Sbjct: 780 HYYLSIIGKEQKDEVAVLEHAGKLLE-YPDSPYSEEALLMRGEILFNHKEYEQAMADYKQ 838 Query: 214 KKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSL 270 + A R + A ++ D ++I + + KL A AK+ Sbjct: 839 LQARATTAERRQLGATGVLRCGALLKDDIEVIQAATTLLTEAKLTPELQNEALYYRAKAY 898 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 ++Q +KA ++ K L E+ + Sbjct: 899 LNQKAVKKAA------------------------DDLKLLAKDTRTLYG-----AEAKFL 929 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-----KEIFLLLAQI 367 V++ G A + + + + F+LL+ + Sbjct: 930 VAQQMYNAGEYAAAEKEILNFIDQSTPHAYWLARSFILLSDV 971 >gi|26449774|dbj|BAC42010.1| unknown protein [Arabidopsis thaliana] gi|29029044|gb|AAO64901.1| At4g37460 [Arabidopsis thaliana] Length = 883 Score = 44.5 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 17/211 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146 L G+ + N A + V ++ + E L+ +R+ A + + Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 358 Query: 147 LQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 PA E + G+ A TKAL P++P V +K+++ Sbjct: 359 QSNPAASEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 416 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ L+ K K+ L +A + G+ + ++S++L N + A + Sbjct: 417 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 472 Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289 A+ KA +E+ +WK Sbjct: 473 LAQFYQELADHCKALECIEQVLQVDNRVWKA 503 >gi|323166987|gb|EFZ52726.1| cellulose synthase operon C domain protein [Shigella sonnei 53G] Length = 582 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 9 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 68 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 69 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 128 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 129 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 163 >gi|255262090|ref|ZP_05341432.1| TPR domain/sulfotransferase domain protein [Thalassiobium sp. R2A62] gi|255104425|gb|EET47099.1| TPR domain/sulfotransferase domain protein [Thalassiobium sp. R2A62] Length = 524 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 12/243 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQR 175 N +V + + A + + L P E L + + A Sbjct: 6 PNPQMVKFKHARALQKAGKVKQAISEYRALILIAPKMAEAHFQ-LARLLIGELEYSKALN 64 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + A +P V + A + SR + + ++ + ++A+L I S Sbjct: 65 HLEVARKYAPLEKSVWRQTLHALNEANDLSRTQSVV-KEVGSGPLDKASKAVLWIDLSET 123 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + GD + ++ K+ + A++ + K K+N P Sbjct: 124 LINLGDTKLAIKLCRDAQKVFPKQEQPTRMIARAHLHAGDFDKTAASCRSAIKIN--PGS 181 Query: 296 ANIYTHL-------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + Y L + + + +K L+ E ++V + K ++ D A A Sbjct: 182 TDAYLGLAKVHKFKIDDPELQDMKALLKTELTEVDTVTLNFALGKAHDDIKDYDTAFAHY 241 Query: 349 MLA 351 A Sbjct: 242 KAA 244 >gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060] Length = 784 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 75/228 (32%), Gaps = 11/228 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +YN A + L++ A G+ + A +AL +P + Sbjct: 244 GEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRN 303 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + E+ RAI + + + A R L +KG+ + D ++L Sbjct: 304 RGDAFRNKGEYDRAIADYDHALR----LDPKSATAYNNRGLAFQNKGEYDRAIADYDQAL 359 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVG 309 +L A + + + +A ++ +++ P+ A Y L + Sbjct: 360 RLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLD--PKSAAAYNGRGAALNKKGEYD 417 Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + G +D+A A+ A+++ P Sbjct: 418 RAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNP 465 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 17/198 (8%) Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 +Y+ A + P + L F+ G+ + A +AL + P Sbjct: 312 GEYDRAIADYDHALRLDPKSATAYNNRGLAFQ--NKGEYDRAIADYDQALRLDPKDAAAY 369 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + E RAI ++ + + A R KG+ + D + Sbjct: 370 TNRGAAFYRKGEHDRAIADYDEALR----LDPKSAAAYNGRGAALNKKGEYDRAIADLDQ 425 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH------LLSE 305 +L+L + + +A L + ++N P+ A+ Y E Sbjct: 426 ALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLN--PKYADAYQERGVTFQARGE 483 Query: 306 NTVGKLKRALRLEEINKE 323 + A + E Sbjct: 484 SDRALADLAEA-VRLKPE 500 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 15/230 (6%) Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 +Y+ A + + P + L F R G+ + A +AL + P + Sbjct: 40 GEYDRAIADYDQALRLDPKSAVAYTHRGLAF--YRKGEYDRAIADYDQALRLDPKYANIY 97 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + E+ RAI +Q + + A++ R KG+ + D + Sbjct: 98 INRGLAFYRKGEYDRAIADYDQALR----LDLRDAVVYTNRGDAFRSKGEYDRAIADYDQ 153 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENT 307 +L+ A + S+ + +A + ++N PE A YTH S++ Sbjct: 154 ALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLN--PEDAAAYTHRGLAFQSKSE 211 Query: 308 VGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + + + G ++A A A+++ P Sbjct: 212 YDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 261 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 51/170 (30%), Gaps = 6/170 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL A + Y + Y + +++ A + L++ Sbjct: 338 RGLAFQNKGEYDRA--IADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRL 395 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A + G+ + A +AL + P + + RA+ Sbjct: 396 DPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALA 455 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 LN+ + ++ A R + +G+ + D E+++L Sbjct: 456 ELNEAVRLNPKY----ADAYQERGVTFQARGESDRALADLAEAVRLKPEL 501 >gi|163794161|ref|ZP_02188134.1| TPR repeat [alpha proteobacterium BAL199] gi|159180775|gb|EDP65294.1| TPR repeat [alpha proteobacterium BAL199] Length = 236 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 15/201 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R DL A A + P + + A + + +N E +R Sbjct: 1 MRENDLTGALELFRHATGMDPTYSEAYFNLGIALRGVDDLEGAAEAIARALENDPENDR- 59 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L+ + ++GD A+ + +++L + A ++ N AE Sbjct: 60 ---VLVWAGVLAHERGDQHAAAELLMRAVELNPTNAEALHQLGDIFVALNSLPDAERCYR 116 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEEINKESVESLVIVSKIALE 337 VN P+IA + L + + +L R IN + L V+ + LE Sbjct: 117 TAIDVN--PKIAGFHGKL--GSVLTQLHRLEEAHLSFGTALAINPDDAALLGGVALVYLE 172 Query: 338 MGSIDQAHAKAMLAMKIAPRK 358 G +DQA A A+ I Sbjct: 173 QGDVDQARVHAERAVSIDNDS 193 >gi|115452613|ref|NP_001049907.1| Os03g0308800 [Oryza sativa Japonica Group] gi|108707757|gb|ABF95552.1| TPR Domain containing protein, expressed [Oryza sativa Japonica Group] gi|113548378|dbj|BAF11821.1| Os03g0308800 [Oryza sativa Japonica Group] gi|125586010|gb|EAZ26674.1| hypothetical protein OsJ_10578 [Oryza sativa Japonica Group] Length = 626 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 10/188 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R + A++ KA+ SP + +A L K N Sbjct: 290 IRAENNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLL----KIGHAVNPR 345 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 ++L + +L + + ++ ++ I + R A + + Sbjct: 346 DPVILQSLALLEYNYSSPNTARVLFRKASQIDPRHQPVWIAWGWMEWKEGNARTARTLYQ 405 Query: 285 KIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVESLVIVSKIALEM 338 + VN E A E G A RL IN +S + + + + E Sbjct: 406 RALSVNSTNECAARCLQAWGVLEQRAGNYTAARRLLRSSLNINSQSEVTWMTWAALEDEQ 465 Query: 339 GSIDQAHA 346 G +A Sbjct: 466 GDPVRAEE 473 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 11/213 (5%) Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W AV+++ RA + + ++ +G++ + + Sbjct: 180 WQCWAVLERK--GGNIRRARELFDAA----TVADAKHIAAWHGWAILEIKQGNIKKARNL 233 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSE 305 + LK C + A + +A + ++ + NP +A + +E Sbjct: 234 LAKGLKYCGGNEYIYQTLALLEARAERFEQARTLFQQATQCNPKSCASWLAWAQVEIRAE 293 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 N K + + + ++ S + + E GSID+A + + PR + L Sbjct: 294 NNAMARKLFEKAVQASPKNRFSWHVWALFEAEQGSIDKARKLLKIGHAVNPRDPVILQSL 353 Query: 366 QIEQANSHNTDKILYWTQSAL--HAMPDPLWIS 396 + + N + + + A P+WI+ Sbjct: 354 ALLEYNYSSPNTARVLFRKASQIDPRHQPVWIA 386 >gi|33864077|ref|NP_895637.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33635661|emb|CAE21985.1| TPR repeat [Prochlorococcus marinus str. MIT 9313] Length = 691 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 60/190 (31%), Gaps = 10/190 (5%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSL 160 + Y ++L E + A + F + + Sbjct: 194 AALEQYRFALLLAPESPELHLNFASALKKEGKVEEAIASCRNAIELRPDFEAAYFGL-GI 252 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 G+ A+ KA+D+ PD + + E A + Sbjct: 253 VL--KENGEFEEAKASYRKAIDLKPDFADAYLNLGHVFKDHGEAEEAKASYRTAIDLKPD 310 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + A L + L+ ++GD+ + ++++L + + A + L + + +A Sbjct: 311 F--ADAYLNLGNILK--EEGDVEEAIASYRKAIELKPDFVDAYLNLGTVLNDEGEVEEAR 366 Query: 281 VILEKIWKVN 290 I+ ++ +N Sbjct: 367 QIVSALYNLN 376 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 18/205 (8%) Query: 135 QYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +YN A E+ +L P + E + + + G + A A+++ PD Sbjct: 191 EYNAALEQYRFALLLAPESPELHL-NFASALKKEGKVEEAIASCRNAIELRPDF-EAAYF 248 Query: 194 VVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + E+ A + ++ A L + D G+ + + Sbjct: 249 GLGIVLKENGEFEEAKASYRKAIDLKPDF--ADAYLNLGH--VFKDHGEAEEAKASYRTA 304 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSEN 306 + L + A + L + +A K ++ P+ + Y +L E Sbjct: 305 IDLKPDFADAYLNLGNILKEEGDVEEAIASYRKAIELK--PDFVDAYLNLGTVLNDEGEV 362 Query: 307 TVGKLKRALRLEEINKESVESLVIV 331 + + L +N ES ++V Sbjct: 363 EEAR-QIVSALYNLNV-IEESSLLV 385 >gi|319761701|ref|YP_004125638.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus denitrificans BC] gi|317116262|gb|ADU98750.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans BC] Length = 593 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 14/205 (6%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y A + + A + + + D + A +L Sbjct: 170 LYARAGDKALAARVVRLALEEELNNPATGPMAWTTVGRMYLAADDKARALEAAGNALAQN 229 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT--VGKLKRA 314 A++ + + L +N +AE +L + P PE+ Y +L E+ + Sbjct: 230 PGDDGAAMLSLQLL--ENAVPEAEALLSRYLAGKPLPEVRMAYARVLLESQRLADAQAQV 287 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAP----RKEIFL---LL 364 + ++ ++ +I + + L+ G +DQA A ++ P R+ L+ Sbjct: 288 DAVTREQPDNAQAWLIRASLQLQAGELDQAEAALQRCTQLLEQDPATEQRQRALTQIYLM 347 Query: 365 AQIEQANSHNTDKILYWTQSALHAM 389 + + W A Sbjct: 348 QSQIAEKRGDLAQAQAWLARIDDAE 372 >gi|196233660|ref|ZP_03132501.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196222330|gb|EDY16859.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 622 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 6/143 (4%) Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + A+ ++ L D D ++L L ++ A L +N Sbjct: 85 KDDERKAEALAAFSQGLLAEDNADQEKMIDAYKKTLALDPTYAELAVKLAYELSRRNDPT 144 Query: 278 KAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 IL+ K P ++ +Y L++ +G LK A + + ++ + + V Sbjct: 145 GGVQILKDTIKAAPKEAVPYIYLSQLYAKDLNKPDIG-LKYAEQALALAPDNFAAYLAVY 203 Query: 333 KIALEMGSIDQAHAKAMLAMKIA 355 +I + G +A A K Sbjct: 204 EIDMATGQSKKAEQLLDRAAKSE 226 Score = 37.2 bits (85), Expect = 5.9, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 42/141 (29%), Gaps = 7/141 (4%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYN 137 + A GL++ + KM + L Sbjct: 89 RKAEALAAFSQGLLAE---DNADQEKMIDAYKKTLALD-PTYAELAVKLAYELSRRNDPT 144 Query: 138 IAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + L+ ++ L + + + +YA +AL ++PD AV + Sbjct: 145 GGVQILKDTIKAAPKEAVPYIYLSQLYAKDLNKPDIGLKYAEQALALAPDNFAAYLAVYE 204 Query: 197 QYVLAKEWSRAITFLNQKKKN 217 + + +A L++ K+ Sbjct: 205 IDMATGQSKKAEQLLDRAAKS 225 >gi|37520665|ref|NP_924042.1| serine/threonine protein kinase [Gloeobacter violaceus PCC 7421] gi|35211659|dbj|BAC89037.1| serine/threonine protein kinase [Gloeobacter violaceus PCC 7421] Length = 913 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 18/230 (7%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAV----VQQYVLAKE--WSRA--ITFLNQKKKNAK 219 D A + +AL + PD + + +++ + W A + Sbjct: 555 KDNEYAIGFFKQALALDPDFALARSGLAVGYLNRFIYGGKVSWREAACREAGRAVALESG 614 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A+ +E + +A Y AI+ L N A + L S + + Sbjct: 615 LAEAHNAMAACYSQMELRLQPQAMAEYRRAID---LNPNFFSAMYNYSAILASLGRLDEG 671 Query: 280 EVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 ++K +VNP + IA+ Y LL E G + L I + V + Sbjct: 672 LYWMKKAVRVNPLCIGCYRSIAS-YYWLLGEAAKGDVWIDKGLALI-PDGARLHVSRGRA 729 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 L G D+A A+ +K P L LA + S ++ + + Sbjct: 730 YLPRGRYDEARQIALQVLKEEPNNAEALSLAGTAERLSGRWERSRRYYER 779 >gi|323445550|gb|EGB02106.1| hypothetical protein AURANDRAFT_9360 [Aureococcus anophagefferens] Length = 155 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 33/116 (28%), Gaps = 2/116 (1%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + P A +M++ + +E L I Y+ A + + A Sbjct: 32 DFPRAEEMYNEAIKLDANDSEAHRGL--GYIMYKRGDYDGAETSFGTAIHLDWNLAEAHR 89 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 L R G+ +A + ++ P + ++ A + Sbjct: 90 GLAEVHLRKGNRVAALQSYRDVAELEPTHSLAFYKIFGMLAQDGDYVAAEQTFQKA 145 Score = 36.8 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 8/147 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 ++H+ L LLE + A E +++ A A L + + GD Sbjct: 12 DREHSLAYHGLGMLLEC----VRNDFPRAEEMYNEAIKLDANDSEAHRGLGYIMYKRGDY 67 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A+ A+ + + + + ++ A+ Q ++ E ++ Sbjct: 68 DGAETSFGTAIHLDWNLAEAHRGLAEVHLRKGNRVAAL----QSYRDVAELEPTHSLAFY 123 Query: 231 ARSLENADKGDMIASYHDAIESLKLCD 257 A GD +A+ ++ L Sbjct: 124 KIFGMLAQDGDYVAAEQTFQKAAGLNP 150 Score = 36.8 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + ++ T A Y ++ + GD +A++ KA ++P Sbjct: 99 GNRVAALQSYRDVAELEPTHSLAFYKIFGMLAQDGDYVAAEQTFQKAAGLNPPNSE 154 >gi|262091743|gb|ACY25332.1| tetratricopeptide repeat protein [uncultured actinobacterium] Length = 225 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 18/176 (10%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +A +L+ +KG + I + C+ + A SL + R A LEK Sbjct: 40 LALALDAFEKGRYQDAKRIIIPITRECEGVHLIHEIAGLSLYRLGQWRDAADHLEKARAA 99 Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES---VESLVIVSKIALEMGSI 341 P HP +A+ Y L+ V +L L++ + + E ++ + + G I Sbjct: 100 MPASTLNHPVLADCYRALMRYEKVDEL--WKELKDASPDPAIVAEGRIVAASAQADKGDI 157 Query: 342 DQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + M K P K + +LA + S + W + H PD Sbjct: 158 QNA-VRIMQQTKKDPAKVREHHLREWYVLADLYDR-SGDVINAREWFKKIAHNDPD 211 >gi|209875869|ref|XP_002139377.1| pre-mRNA-plicing factor 6 [Cryptosporidium muris RN66] gi|209554983|gb|EEA05028.1| pre-mRNA-plicing factor 6, putative [Cryptosporidium muris RN66] Length = 963 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 9/114 (7%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILL 229 + A K L + P++ + A + K+W +A T L++ KN K A + Sbjct: 731 DQALDIFEKGLLLCPNSVDLWLAATDILIGKKDWKKARTMLDRARLKNPKTPELWLATIR 790 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + S N+ I S ++L+ C +S I A+++ ++ R++ +L Sbjct: 791 LEESAGNSSITQQIMS-----KALRECPSS---GILYAEAIFLESNIRRSISLL 836 >gi|91976940|ref|YP_569599.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas palustris BisB5] gi|91683396|gb|ABE39698.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas palustris BisB5] Length = 629 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 90/283 (31%), Gaps = 47/283 (16%) Query: 126 EVQIALAERQYNIAH-EKLEMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDI 183 + + + + +Y A E + Q P A RIG + A +AL + Sbjct: 112 KARSLIEQGKYAGAIVELDRAVKQDPKFPFAYAWRG--VAKMRIGKFDEAMSDFNEALKL 169 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P + + ++ + + +N E + A R + +D GD Sbjct: 170 DPRNAFALGQRGNAFFALRDNGKGLADVNAAL----EIDNTAAAPYAFRGMIYSDMGDQD 225 Query: 244 ASYHDAIESLKLCDNSIM--------------------------------ASICAAKSL- 270 + D ++KL N A+ + + Sbjct: 226 KALADLTRAVKLNPNLPPAHGGLGSVYSKLQEFEKSLAAYNRALELAPNTAAYLSGRGYV 285 Query: 271 -ISQNKKRKAEVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 S + +A + + +N P I ++ + N +K +I +++ Sbjct: 286 HFSLGEYDRAITDISQAIAINSRFARPYINRGRAYIATNNLSAAIKDFDEALKIEPKNIT 345 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 +L+ ++ +A A A+K+ P + +A IE+ Sbjct: 346 ALLQRAQAFERSRDFAKAQADLQDALKLVPSHPVA--VAGIER 386 >gi|330961725|gb|EGH61985.1| TPR repeat-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 556 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 97/276 (35%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F E LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQETLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YRIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 SA + A P A Q A + ++ ++ + + + + L A Sbjct: 84 SALQTALIWAKNDPKNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGD-THFDFLALSA 142 Query: 232 RSLENADKGDMIASYH------------------------DAIESLKLCDNSIM------ 261 + + ++ S+ DA +SLKL +++ Sbjct: 143 AETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDAEQSLKLLEDNPPKEGEVA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + D+A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 94/293 (32%), Gaps = 12/293 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 K+ Q ++ L + L + L + ++ A LE ++ A + A +L Sbjct: 254 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWDEAAGYLEELIARGAHVDSAHLNLGRI 312 Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 D SA YA + PD V + A L + + ++ Sbjct: 313 HEERDDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLAEARAEEPDYA 370 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + + + ++LK + + A +N + E Sbjct: 371 IQ---LYLIEAETLTSNDQLDRGWQVLSQALKQYPDDVNLLYTRAMLAEKRNDLTQMEKD 427 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSKIALEM 338 L I K P +A + + A L +IN + L + + M Sbjct: 428 LRTIIKREPENAMALNALGYTLSDRTTRYAEARELIEKAHKINPDDPAVLDSLGWVNYRM 487 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G++D A A++ P E+ L ++ A + W AL PD Sbjct: 488 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAKGEQREARKVW-AKALEQQPD 539 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 73/205 (35%), Gaps = 7/205 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L + ++ N A K + + +YL+E + + Q + + L L Sbjct: 340 LRQADILVSNGNGAEAAKRLAEARAEE-PDYAIQLYLIEAETLTSNDQLDRGWQVLSQAL 398 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206 + +Y+ + + DL ++ + P+ A+ ++ Sbjct: 399 KQYPDDVNLLYTRAMLAEKRNDLTQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYAE 458 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + + K + +L + N G++ A+ ++L+ + +A+ Sbjct: 459 ARELIEKAHKINPD----DPAVLDSLGWVNYRMGNLDAAERYLRQALERFPDHEVAA-HL 513 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 + L ++ ++R+A + K + P Sbjct: 514 GEVLWAKGEQREARKVWAKALEQQP 538 >gi|327274288|ref|XP_003221910.1| PREDICTED: tetratricopeptide repeat protein 21A-like [Anolis carolinensis] Length = 1317 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 87/287 (30%), Gaps = 50/287 (17%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q+ L + + ++LQ T E + R A L+ +PD Sbjct: 925 AQLYLLQGDTDQCEHYCTLLLQDDDTSEVGTMMMANLMFRKEKYEQAISLYRDVLEKTPD 984 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 V E ++ + + A TF KK + + L + + Sbjct: 985 NFSVMENLIDLLRRSGKLEEATTFFELAKKKSSRMSLEPGFNYC-MGLYSWHMMQPNQAL 1043 Query: 247 HDAIESLK----------------LCDN-------------SIMASICAAKSLISQNKKR 277 ++ K L + ++ S K Q+ R Sbjct: 1044 RFFNKARKDSDWGQKALSYMIQICLNPDNEIIGGEMFENQNNMETSGLKEKRESEQHGIR 1103 Query: 278 KAEVILEKIWKVNPHP-------EIANIY---THLLSENTVGKLKRALRLEEINKESVES 327 AE +L++ + PH E+ Y N LK + + +++V + Sbjct: 1104 TAEKLLKEFY---PHSQEGQNQVEMLQSYCLMATKEKHNVEKALKVFTEMGQNERDNVPA 1160 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-------IFLLLAQI 367 ++ +++ + + +A + K+ ++LLA I Sbjct: 1161 ILAMAQAYVILKHTPKARTQLKRLTKVNWSLRDADELEKAWILLADI 1207 >gi|326919998|ref|XP_003206263.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Meleagris gallopavo] Length = 1167 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 104/306 (33%), Gaps = 43/306 (14%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517 Query: 141 EKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + + + P + + L + G+ A + +AL I+ D P + ++ Sbjct: 518 KLYKNILREHPNYVDCYLR-LGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHL 576 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHD 248 +EW + K N ++L + R E +K + Sbjct: 577 AKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAI 635 Query: 249 AIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANI 298 + L+ N A ++ A K + + R+A + +W +A+I Sbjct: 636 YKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHI 690 Query: 299 YTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y + ++ + + ++ E L+ +++ + G + + + A +AP Sbjct: 691 YVEQKQYISAVQMYENCLRKFYKH--QNTEVLLYLARALFKCGKLQECKQTLLKARHVAP 748 Query: 357 RKEIFL 362 + + Sbjct: 749 SDTVLM 754 >gi|302338948|ref|YP_003804154.1| hypothetical protein Spirs_2446 [Spirochaeta smaragdinae DSM 11293] gi|301636133|gb|ADK81560.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM 11293] Length = 678 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 95/316 (30%), Gaps = 31/316 (9%) Query: 51 FLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYV 110 F+ A + K + G + + LA +++ Sbjct: 11 FVPALLFFLICINVLWG-------------QSKAVELYTQGEAARNSGKSELAMELYKAS 57 Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEK--LEMMLQIPATREFAVYSLYFESCRIG 168 Q++ + E + L +IA E A L A + +G Sbjct: 58 LQENPNYREPYLRL--AEIAFYEGSSEEALAYADTAAKLGKEACDVDVLRG--RILTDLG 113 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 AQ + L P+ A+ + + RA+ + ++ + A+L Sbjct: 114 RFTEAQELLSTVLSKQPNLVSAYRAMGELEIARGSLRRALVWYDRAL--NIDPVNRIALL 171 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + ++ + + +++L S + AA+ + N +AE + + Sbjct: 172 SSVPVTDALEQWNDSE--QVLLRAVELYPESFFVHLTAARHYLEINDLSRAEYHCDVALR 229 Query: 289 VNP-HPEIANIYTHLLS-----ENTVGKLKRALRLEEINK--ESVESLVIVSKIALEMGS 340 + P + + Y +LS E+ + +L + + +G Sbjct: 230 IEPENRDALLFYALVLSRQGRYEDLLNRLNSGDSKGSSASLLDDYLGYYLKGSAQKALGR 289 Query: 341 IDQAHAKAMLAMKIAP 356 +A +++ P Sbjct: 290 YPEALDSFSAVLRLRP 305 >gi|262305025|gb|ACY45105.1| acetylglucosaminyl-transferase [Phrynus marginemaculatus] Length = 290 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GLVQEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ ISP + + A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 15/168 (8%) Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A + AL + P + A + + E+ A Sbjct: 36 VQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAH 91 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + +G + + E++++ A +L + A + ++ Sbjct: 92 SNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQI 151 Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 NP H +A+I H S N + ++ + ++ ++ Sbjct: 152 NPAFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 197 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 62/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ T ++ +L G + A R KAL++ P+ Sbjct: 27 ANALKEKGLVQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + + A + GD+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYEARMKKLVSIVADQLEKNRLPSVHPHH 236 >gi|119489046|ref|XP_001262823.1| heat shock protein (Sti1), putative [Neosartorya fischeri NRRL 181] gi|119410981|gb|EAW20926.1| heat shock protein (Sti1), putative [Neosartorya fischeri NRRL 181] Length = 581 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 16/153 (10%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L T + + A+ A K I P Sbjct: 342 AYEKLGDFTQAIEYYHKSLTEHRTPDALTKLRN----------AEKAKDKAEKEAYIDPA 391 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + Q+ +W A+ + K A R R+ + Sbjct: 392 EAEKARELGQKKFQEADWPGAVEAFTEMTKRAPSDPRG----FSNRAAALIKLMAFPQAV 447 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 D E+++ I A I +++L++ + KA Sbjct: 448 QDCDEAIRRDPKFIRAYIRKSQALVAMKEYSKA 480 >gi|86609433|ref|YP_478195.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557975|gb|ABD02932.1| tetratricopeptide repeat protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 359 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 8/161 (4%) Query: 202 KEWSRAIT--FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 WS A L+ N A+ L SL A G + ++ + NS Sbjct: 83 GGWSSAQAQVLLHVPLPNGGLMQAQ-ALQLATDSLRLAQFGQTEEALRRLQLAVAMVPNS 141 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRAL 315 + +A L+K ++P + A +Y +L + + Sbjct: 142 SELLYVLGNVHLELGDLEQAIASLQKARALSPQ-DGAVLYSLGSAYLRQGSYFAAAETLE 200 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 R + ++ + + L + D A + +++ P Sbjct: 201 RAVALQPDNPNARFQLGNAYLMLDRWDAARQEYEKTLQLDP 241 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 86/286 (30%), Gaps = 55/286 (19%) Query: 83 KGYKALYTGL-MSIAAHNIPLARKMHSYVSQQHTFHNE-YLVYLLEVQIALAE------- 133 + ++AL GL + + A+ Q H L++ Q Sbjct: 67 RPWRALSVGLAVVLGMGGWSSAQ-------AQVLLHVPLPNGGLMQAQALQLATDSLRLA 119 Query: 134 --RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 Q A +L+ + +P + E +Y L +GDL A KA +SP V Sbjct: 120 QFGQTEEALRRLQLAVAMVPNSSEL-LYVLGNVHLELGDLEQAIASLQKARALSPQDGAV 178 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ Y+ + A L + + R + + D+ D A+ + Sbjct: 179 LYSLGSAYLRQGSYFAAAETLERAVALQPDNPNAR--FQLGNAYLMLDRWD--AARQEYE 234 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 ++L+L A Q A Sbjct: 235 KTLQLDPAYWPAMNNMGLVDYEQGDLDAA------------------------------- 263 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + R R E+N E + ++ G ++A AM++ P Sbjct: 264 IDRWERTIEMNNAVAEPYLALATALYIRGETERAEELGAKAMRLDP 309 >gi|86159834|ref|YP_466619.1| hypothetical protein Adeh_3415 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776345|gb|ABC83182.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 638 Score = 44.5 bits (104), Expect = 0.039, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 7/207 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+GD A+R +AL P + V A+ + A+ L R R Sbjct: 150 RLGDREGAERDLRRALAQRPSSGAVRIALGTLLRRRGAVAEAVALLEPAAAAGSNEERAR 209 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A L+A + G + +++ + + A++ + + + Sbjct: 210 A--LVALGAAHLAAGRRAEATRAFDQAVLYAPARVEIRLGVARAWLGGDAGDADRALAVL 267 Query: 286 IWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P++ ++ L + + G + R ++ + S V ++AL Sbjct: 268 ARAADLAPDVPAVHAALGRARERTGDGAGAAEAYERALRLDPSNRYSRRRVLRLALAARD 327 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +A +A + P LA + Sbjct: 328 FARARHEADRLVTDGPEVAEHHFLAAL 354 Score = 36.8 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 53/179 (29%), Gaps = 35/179 (19%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P A+ Q A+ + A+ L + + ++ ++ + A Sbjct: 439 RRAVELDPRHAPGWLALGQLQSDARRFDEAVASLRRALEARPGYD----AAELSLGVTAA 494 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G + L S A +L+ R+A + Sbjct: 495 RAGRTAEAIAAYRRVLARSPRSATAWYDLGLALLDAGDPRQAGDAFRQA----------- 543 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 I+ + V S +++ L G + +A A+ + + P Sbjct: 544 --------------------AAIDPDHVPSRRKTAELELGSGRVAEARARFEELLDLVP 582 >gi|310824377|ref|YP_003956735.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309397449|gb|ADO74908.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 3177 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 9/186 (4%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAV 157 +A K + H L L + + + A + + P A Sbjct: 371 QVAVKALHELLGLKPDHLPSLKSL--ARASDLAKDRAGAVRAYRRLAALARDPVEAADAH 428 Query: 158 YSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + D+ A+ + AL ++PD P + + E RA+ L++ ++ Sbjct: 429 VHLARLCAQTEDDIAGARLHCEAALRLAPDQPDALLLLGELCHRGGEHLRALKALDRLRE 488 Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 E +R L+A + + + E++ L AA+ S Sbjct: 489 VALARHELDRVGQANLLAGRVWEEGLQQLDNALLRYREAVTLLPGEAEPLFAAARVAESL 548 Query: 274 NKKRKA 279 K ++A Sbjct: 549 GKVQEA 554 >gi|302343448|ref|YP_003807977.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] gi|301640061|gb|ADK85383.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] Length = 385 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 82/262 (31%), Gaps = 11/262 (4%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 +RN D A G +AA A + S+ L + A ++ Sbjct: 129 KRRNPDPVDVAFERGKALLAAGKPDQA--LESFDEALKLSPKSPRTLLAIGEALEALQKD 186 Query: 137 NIAHEKLEMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 A + + + R A L ++GD A ++ +A ISP + Sbjct: 187 EEALSRYKEAANLAE-RFVKAHDRLATLYQKMGDAEEATKHLRRAAKISPRNARRQLNLG 245 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + + NA+ + L G + E++ + Sbjct: 246 KALIEQG----MLEEGMAALTNAQNAAKKDPDLFSEVGEVLLSAGLNEQAAEAFSEAVSI 301 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLLSENTVGKLKR- 313 N + + Q + A + + V P E + L E+ K R Sbjct: 302 DPNMVHLYNRLGIAYRRQKRYDDALRVYGQAMSVAPDDENLLYNMALALIESKRAKEARV 361 Query: 314 -ALRLEEINKESVESLVIVSKI 334 + ++ ++ E+ V+++K+ Sbjct: 362 CLQKALQLREDFKEARVLLAKL 383 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 13/167 (7%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + A + +A+ ++ K + R +L I +LE K + + E+ L Sbjct: 144 KALLAAGKPDQALESFDEALKLSP--KSPRTLLAIGEALEALQKDE--EALSRYKEAANL 199 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH-LLSENTVG 309 + + A A +A L + K++P + + E + Sbjct: 200 AERFVKAHDRLATLYQKMGDAEEATKHLRRAAKISPRNARRQLNLGKALIEQGMLEEGMA 259 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L A + + + + S V ++ L G +QA A+ I P Sbjct: 260 ALTNAQNAAKKDPD-LFSE--VGEVLLSAGLNEQAAEAFSEAVSIDP 303 >gi|253997194|ref|YP_003049258.1| hypothetical protein Mmol_1827 [Methylotenera mobilis JLW8] gi|253983873|gb|ACT48731.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera mobilis JLW8] Length = 591 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 94/277 (33%), Gaps = 30/277 (10%) Query: 130 ALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A YN A + + + T + +Y L + + +A + K + P Sbjct: 317 AFQTNDYNEAEKDFKQAIAHNFKDTDQIYLY-LGQTAEKQKHDVAAMSWYNK-VSSGPRY 374 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA--S 245 + + +AI L+ + ++ +L DK + A Sbjct: 375 LEAQFNLANLIARTQSTDKAIELLDN--LEDLNVEQQILVIKAQAALLAKDKRNQEAFDL 432 Query: 246 YHDAIESLKLCDNSIMASICAAKSLIS----QNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A+++L + AA+ L +++ R+A I EK P+ A Y + Sbjct: 433 LEKAVKNLPNTPELVYDYALAAERLAKFDVMESELRRA--IAEK-------PDFAAAY-N 482 Query: 302 LLSENTVGK---LKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L + + LK A+ L E + L + G++D+A A +I Sbjct: 483 ALGYSFADRNIKLKEAINLIEKALTLAPNDHYMLDSLGWAHYRKGNLDKAIQYLEQAFRI 542 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 P EI L ++ W+ AL A PD Sbjct: 543 NPDPEIAAHLGEVLWQKGEFEKAKKVWSD-ALTADPD 578 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 12/193 (6%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYS 159 K + + E + +++ Q AL + E + + +P T E VY Sbjct: 392 DKAIELLDNLEDLNVEQQILVIKAQAALLAKDKRN-QEAFDLLEKAVKNLPNTPEL-VYD 449 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNA 218 + R+ + + +A+ PD A+ + AI + + A Sbjct: 450 YALAAERLAKFDVMESELRRAIAEKPDFAAAYNALGYSFADRNIKLKEAINLIEKALTLA 509 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + +L + + KG++ + ++ ++ + + + L + + K Sbjct: 510 PNDH----YMLDSLGWAHYRKGNLDKAIQYLEQAFRINPD-PEIAAHLGEVLWQKGEFEK 564 Query: 279 AEVILEKIWKVNP 291 A+ + +P Sbjct: 565 AKKVWSDALTADP 577 >gi|260811027|ref|XP_002600224.1| hypothetical protein BRAFLDRAFT_66729 [Branchiostoma floridae] gi|229285510|gb|EEN56236.1| hypothetical protein BRAFLDRAFT_66729 [Branchiostoma floridae] Length = 1639 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 51/220 (23%) Query: 202 KEWSRAITFLNQKKK-----NAKEWNRNR--AILLIARSLENADKGDMIASYHDAIESLK 254 + +A T Q + + E R+ A +L D GD + ++LK Sbjct: 1066 GDLQKARTCYEQALQMTKTIHGAEEARHPDIANILNGLGCVWDDAGDNEKARALWEKALK 1125 Query: 255 L--------CDNSIMASIC--AAKSLISQNKKRKAEVILEKIWK-------VNPHPEIAN 297 + + A + +L KA E+ K HP+IA Sbjct: 1126 MYQDIYGPTTPHHDTAVVLHNMGIALGKSGNYFKAISSYEEALKMTEEVLGNTKHPDIAL 1185 Query: 298 IYTHLLS---------------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + L S E + K E + ESL +++ E+G Sbjct: 1186 LLGTLGSACHEAGKYTKSLQYHERALEINKAFHGQEAAHPSIAESLCNLAEAHKELGDHT 1245 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQA--NSHNTDKILY 380 +A A+ + +I +H D++ + Sbjct: 1246 KAAQLYEEALN----------MTKIIHGANETHGEDEVRH 1275 >gi|91203975|emb|CAJ71628.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia stuttgartiensis] Length = 301 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 17/230 (7%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + + L+ + A L F D A Y KA + PD + Sbjct: 27 NSEQAIDAYKQSLKSDSAFTDAYVKLGFIYLARNDYGEALHYLQKAASLEPDNAETLNNL 86 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 Y ++ A + E A++ IA+ LE +G+ + +++ Sbjct: 87 GYVYEKMFRFASAKQMYKKALTINPE--NIEALVNIAKILEL--EGNYNGAIEQYKKTIA 142 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHL-LSENTV 308 ++I C A + + A E + +PH + ++Y L S + Sbjct: 143 RYPDAIFPHFCLAVLYDTHDMFDDAIREYELVLGKDPHYVKAMFNLGSLYAQLGNSNEAI 202 Query: 309 GKLKRALRLEEINKESVESLVI--VSKIALEMGSIDQAHAKAMLAMKIAP 356 LKRA L N + E +++ + ++ L + + A ++ P Sbjct: 203 MLLKRASEL---NPQ--EVIILNKLGEMYLFISNYSAAEQALKQSIASNP 247 >gi|18379248|ref|NP_563702.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] gi|332189539|gb|AEE27660.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 360 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 22/148 (14%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 K +S AI + + +IL RS N G+ + DA ES++L Sbjct: 43 RKGKKHYSEAIDCYTKAISQGVLSDSETSILFSNRSHVNLLLGNYRRALTDAEESMRLSP 102 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 +++ A AAK+ +S + +A+ EK + ++ + +K+ L+L Sbjct: 103 HNVKAVYRAAKASMSLDLLNEAKSYCEK---------------GIENDPSNEDMKKLLKL 147 Query: 318 EEINKESVESL-------VIVSKIALEM 338 K+ E V+ +K L Sbjct: 148 VNSKKQEKEQHEAQASQAVVEAKACLSA 175 >gi|153004759|ref|YP_001379084.1| hypothetical protein Anae109_1897 [Anaeromyxobacter sp. Fw109-5] gi|152028332|gb|ABS26100.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 268 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 4/167 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L A L+ A+ L + R GDL++A+R +A+ ++PD Sbjct: 52 AYLEAADPERATVAFSHALEFDPDFPEALNGLGIVARREGDLDTARRRFERAVRLAPDFA 111 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM----IA 244 + + + A L + + R L A D D Sbjct: 112 EGHANLGETLLAAGREGGGTDALRAALRIDPDLADARQNLARALLRHGLDSPDRGARWAE 171 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + + L+ + A A + + +AE + ++ P Sbjct: 172 ARREYLHLLEAAPDRAAAHHDLAFMDYVEGRFERAEAGYRRAAELEP 218 >gi|118372054|ref|XP_001019224.1| hypothetical protein TTHERM_00849220 [Tetrahymena thermophila] gi|89300991|gb|EAR98979.1| hypothetical protein TTHERM_00849220 [Tetrahymena thermophila SB210] Length = 920 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 15/180 (8%) Query: 186 DAPWVTEAV---VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P + + ++ +E +A + + +KN ++L + K Sbjct: 611 NLPESQQILVLSIKYLKKNEEIDQARELVYKARKNNPTHQVYLSLLKLEYQTGALQK--- 667 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTH 301 ++ ++ ++ N I +AK + +A + EK + NP + Y Sbjct: 668 --AFQESQNAMGAFPNCEKIFILSAKIAYAHKSIEQARQVYEKGLRFNPMSVSLIQKYVE 725 Query: 302 LLSENTVGKLKRAL-RLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L E RA LE+ ++ E ++ +E + A A+K P Sbjct: 726 L--EINHKYFARARPVLEKFRVKLPKNPELWCTAVQLEIEAENKKGARYMLARALKECPD 783 >gi|27380929|ref|NP_772458.1| hypothetical protein bll5818 [Bradyrhizobium japonicum USDA 110] gi|27354095|dbj|BAC51083.1| bll5818 [Bradyrhizobium japonicum USDA 110] Length = 307 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 12/189 (6%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Y ++ +AI +Q + A R + KG+ + +++KL Sbjct: 100 NAYTAKGDYDKAIRDFDQSIALKPTY----AKAFNNRGVAYLRKGEYELAIEAFDDAIKL 155 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLK 312 + + A + A + + +N ++A ++ ++ P + A +T + L+ Sbjct: 156 DPDYVAAFVNRAGAYLKKNDHQRAAHDYDEAIRLQPDSQAARSGRCWTRAVLGAWQAALE 215 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIEQ 369 R + S I L+MG A A A++ AP L LA+++Q Sbjct: 216 DCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAIADYNSALRAAPELASALFGRGLAKLKQ 275 Query: 370 AN--SHNTD 376 + ++D Sbjct: 276 GDAIGGDSD 284 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 10/151 (6%) Query: 129 IALAERQYNIAHEKLE-MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 L + +Y +A E + + P Y + D A +A+ + P Sbjct: 135 AYLRKGEYELAIEAFDDAIKLDPDYVAAFVNRAGAY---LKKNDHQRAAHDYDEAIRLQP 191 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D+ + W A+ ++ ++ A + +R L + G+ A+ Sbjct: 192 DSQAARSGRCWTRAVLGAWQAALEDCDRALQSGSTS----AAVYDSRGLIHLKMGEFGAA 247 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKK 276 D +L+ A + + Q Sbjct: 248 IADYNSALRAAPELASALFGRGLAKLKQGDA 278 >gi|295883135|gb|ADG56770.1| hdsp protein [Myxococcus fulvus HW-1] Length = 2336 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 6/135 (4%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + D+ + Y + P A+ L Sbjct: 758 LEGRFKALIAAPDMAAEHHYPSTDTKEGPGLAETPYERAFYLARTGNIEEALQTLPTATD 817 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + R R+ A G + +A+ + N + AA L Q + Sbjct: 818 DHPWHTRLD------RAELRAVGGQNGQALDEALALAQEFPNRAPIAFLAADMLARQGRF 871 Query: 277 RKAEVILEKIWKVNP 291 +A + E+ +K P Sbjct: 872 AEALPLAEEAFKQLP 886 >gi|119503632|ref|ZP_01625715.1| TPR domain protein [marine gamma proteobacterium HTCC2080] gi|119460694|gb|EAW41786.1| TPR domain protein [marine gamma proteobacterium HTCC2080] Length = 746 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 9/134 (6%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK--I 286 L+ + +GD+ + E+L++ A + A L +Q + +A +L++ Sbjct: 577 LLQLANYWLARGDIGRAEASLREALRINPQLDPARVNLADVLRAQGRDNEARALLKQGIA 636 Query: 287 WKVNP---HPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + P H + + + S + +L +A LE + + + G Sbjct: 637 TSLAPGALHHSLGLLEFREGNSTAAITELAKAAELEAQGSRH---RYVYAIALHDTGQPA 693 Query: 343 QAHAKAMLAMKIAP 356 QA A + P Sbjct: 694 QAFALLEQLNQDQP 707 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 8/149 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD+ A+ +AL I+P + + A L Q + Sbjct: 585 LARGDIGRAEASLREALRINPQLDPARVNLADVLRAQGRDNEARALLKQGIATSLAP--- 641 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L + L +G+ A+ + ++ +L A +L + +A +LE Sbjct: 642 -GALHHSLGLLEFREGNSTAAITELAKAAELEAQGSRHRYVYAIALHDTGQPAQAFALLE 700 Query: 285 KIWKVNP-HPEIANI---YTHLLSENTVG 309 ++ + P +PE+ + Y + Sbjct: 701 QLNQDQPGNPEVLSALISYAEGAGDVAKQ 729 >gi|119485107|ref|ZP_01619492.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106] gi|119457335|gb|EAW38460.1| hypothetical protein L8106_06654 [Lyngbya sp. PCC 8106] Length = 385 Score = 44.5 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 67/200 (33%), Gaps = 8/200 (4%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 Y E+ R G+ +A ++ AL + P P + V ++++ A + + Sbjct: 103 YLEALR-GNYQAAAKFYRDALVLDPQNPDFQYGLAYSLVKSEDYRGAADAYRKAISLKPD 161 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + ++ +GD ++ + N+ A +L+ Q+ KA Sbjct: 162 LLN----AYLGLAVSLFRQGDYGSAVKTYEMVIASDPNNWQAYASMGMALLRQDNTPKAV 217 Query: 281 VILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L + + P+ I L S + G + + ++ E + ++ Sbjct: 218 ETLRQAATLAPNEASIQIKLGVALLRSGDQAGAIAAFEQAAALSPRDGEIQFQIGEVLKS 277 Query: 338 MGSIDQAHAKAMLAMKIAPR 357 +D A A+ P Sbjct: 278 QDDLDAAMEAYQRALAFNPD 297 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 20/266 (7%) Query: 132 AERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 Y A + ++ P +F Y L + + D A KA+ + PD Sbjct: 107 LRGNYQAAAKFYRDALVLDPQNPDF-QYGLAYSLVKSEDYRGAADAYRKAISLKPDLLNA 165 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + ++ A+ A + N +A + +L + + + Sbjct: 166 YLGLAVSLFRQGDYGSAVKTYE--MVIASDPNNWQAYASMGMAL--LRQDNTPKAVETLR 221 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305 ++ L N I +L+ + A E+ ++P +I + + Sbjct: 222 QAATLAPNEASIQIKLGVALLRSGDQAGAIAAFEQAAALSPRDGEIQFQIGEVLKS--QD 279 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA----HAKAMLAMKIAPRKEIF 361 + ++ R N + VE+ V + +I L+ A + A Sbjct: 280 DLDAAMEAYQRALAFNPDLVEADVAIGEIQLQKKEYIGAIVSFRRVINRVPQNAN-AHYH 338 Query: 362 LLLAQIEQANSHNTDKILYWTQSALH 387 L +A + + + + AL Sbjct: 339 LGMAI--KGRGGRDSQAIAALEKALK 362 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 60/201 (29%), Gaps = 11/201 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E G ++ A +A + P P + + L + A F ++A Sbjct: 69 RELVDAGKIDEAVLVYVQAAGLDPSDPKIYSGIAYLEALRGNYQAAAKF----YRDALVL 124 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + + D + +++ L + + A + A SL Q A Sbjct: 125 DPQNPDFQYGLAYSLVKSEDYRGAADAYRKAISLKPDLLNAYLGLAVSLFRQGDYGSAVK 184 Query: 282 ILEKIWKVNPHPEIANIYTH-----LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 E + + P Y L +NT ++ + + + + L Sbjct: 185 TYEMVIASD--PNNWQAYASMGMALLRQDNTPKAVETLRQAATLAPNEASIQIKLGVALL 242 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 G A A A ++PR Sbjct: 243 RSGDQAGAIAAFEQAAALSPR 263 >gi|291566530|dbj|BAI88802.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 1687 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 20/228 (8%) Query: 146 MLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + P T +Y+L ++ + L A KA+ ++P+ + + + W Sbjct: 941 LALDPET--ANIYALLGKALLGMKRLPEAVAAFEKAVQLNPEDATIHTNLGSLAARMQGW 998 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMA 262 +AI + + G + ++L L + Sbjct: 999 EQAIKCYERAIALQPDL----VAAHRNLGKVWHKLGKPQQAVSCRYQALILQPEEGEVSE 1054 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL-----KRALRL 317 + SL+ + ++AEV ++ + +PH + Y +L + L R Sbjct: 1055 FLAVGNSLLQSGRLQEAEVCYRQVVRRSPHD--SQAYHNLGEVLSAQGLWSEAEAAYRRA 1112 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 E+ +S ES + + + D A A A++ PR LL+A Sbjct: 1113 VELQPDSFESRNSLGQALVAQEKWDDAIACYGRALEQNPR----LLMA 1156 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 8/143 (5%) Query: 153 REFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 RE Y ++ + +G+ A R KA+ + P + + + + + + AI L Sbjct: 1236 REARAYGIWGRALVGLGEYGKALRCYRKAIALEPKNGLWHQELGELCLQQRRYPEAIVSL 1295 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKS 269 + K R++ SL G + E+++ + A+ Sbjct: 1296 QEAVKLKPHPRIYRSLASAWGSL-----GKEAEALDCLFEAIQAKPELASLGECLNLAQG 1350 Query: 270 LISQNKKRKAEVILEKIWKVNPH 292 L + +K +A + +PH Sbjct: 1351 LWRRGQKTQAIACYQVAVTTHPH 1373 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 26/252 (10%) Query: 129 IALAERQYNIAHEKLE-MMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 I + + A + + P T + + G+ +A AL P Sbjct: 93 ILQKQGREMEAIAAYQNAIYLEPETPMAYSNLGGILV---GRGEYKTALEILGTALKKWP 149 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + + ++W RAI + + + AI+ +G IA+ Sbjct: 150 QTASLHNNLGRSLLGKQDWDRAIAAFLKAVQLQPDS----AIIQHNLGKALQQQGSHIAA 205 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT----- 300 + L L A SL+ +A L++ K + Y Sbjct: 206 LDCFQKVLILAPEFPGIHSDLAWSLMELADFPEAIAHLKEAIKGQEF--LLTAYITESEK 263 Query: 301 HLLSENTVGKLKR-ALRLEEINKES--------VESLVIVSKIALEMGSIDQAHAKAMLA 351 + + K A L+ +N+ ++ + + E + A Sbjct: 264 QAVDGSLGEAQKACAQLLQALNQNDISVSVITLAQTYFHLGQALAEYQNFGSAEQYYQKT 323 Query: 352 MKIAPRKEIFLL 363 +K+ P L Sbjct: 324 LKLQPDFTAAHL 335 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 83/254 (32%), Gaps = 27/254 (10%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A +++ A ++L G + A+ +A+++ PD+ Sbjct: 1065 SGRLQEAEVCYRQVVRRSPHDSQAYHNLGEVLSAQGLWSEAEAAYRRAVELQPDSFESRN 1124 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIE 251 ++ Q V ++W AI + + A+ ++++L +++K + ++ Sbjct: 1125 SLGQALVAQEKWDDAIACYGRALEQNP--RLLMALENLSKALRHSNKSLPPSQARVLSLI 1182 Query: 252 SLKLCDNSIM-------------ASICAAKSLISQNK--KRKAEVILEKIWKVNPHPEIA 296 + + ++ A L Q + + W+ P A Sbjct: 1183 AGGQIPEELPPPGGGAFAPPDVDVALERATELYQQKRYQACVQQCQQVVQWR----PREA 1238 Query: 297 NIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 Y + L+ + + ++ + ++ L+ +A A Sbjct: 1239 RAYGIWGRALVGLGEYGKALRCYRKAIALEPKNGLWHQELGELCLQQRRYPEAIVSLQEA 1298 Query: 352 MKIAPRKEIFLLLA 365 +K+ P I+ LA Sbjct: 1299 VKLKPHPRIYRSLA 1312 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 63/187 (33%), Gaps = 13/187 (6%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYS-LY 161 R + +++ + ++ + + + A + + ++ P ++S L Sbjct: 170 RAIAAFLKAVQLQPDSAIIQHNLGKALQQQGSHIAALDCFQKVLILAPE--FPGIHSDLA 227 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-------ITFLNQK 214 + + D A + +A+ ++ + A + LNQ Sbjct: 228 WSLMELADFPEAIAHLKEAIKGQEFLLTAYITESEKQAVDGSLGEAQKACAQLLQALNQN 287 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + + ++L A+ + ++ ++LKL + A + L Q Sbjct: 288 DISVSVITLAQTYFHLGQAL--AEYQNFGSAEQYYQKTLKLQPDFTAAHLAWGDILREQG 345 Query: 275 KKRKAEV 281 + ++A+ Sbjct: 346 RLKEAQK 352 >gi|209519570|ref|ZP_03268362.1| cellulose synthase operon C domain protein [Burkholderia sp. H160] gi|209499987|gb|EEA00051.1| cellulose synthase operon C domain protein [Burkholderia sp. H160] Length = 1295 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 86/298 (28%), Gaps = 52/298 (17%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA--HEKLEMMLQIPATR 153 A AR + L + + IAL + +A + L+ Q PA Sbjct: 614 AEGRDDEARASLRQAEAVAQNDPQMLATIGQEWIALGDADRGLALVKDWLDAHPQDPAIA 673 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ------------QYVLA 201 Y + D + ++AL P A + + + Sbjct: 674 VRLRYGDLLAAAHRDDDLAVWTARSRAL---PGMTDTQRAQFDDQSLRLALRTVNRQLDS 730 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A L + A L+A++ + GD A A +L ++ Sbjct: 731 GDVHGARRTL----AGVPDAQHTDARWLLAQADVDETAGDFRAGARAAQSALAKQPDNAD 786 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A + A+ ++ +A + L + Sbjct: 787 ARLTLARMYEHMGRRTEATALTR------------------------------EVLADTP 816 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKI 378 + V + + +++ + G D+A A P++ L A +I++A D Sbjct: 817 ADDVNTRLAIAQRLVAQGHEDEAAAVIGPLRGEFPQRSDLTLQAGRIDEAQGRFNDAA 874 Score = 44.5 bits (104), Expect = 0.042, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 69/235 (29%), Gaps = 30/235 (12%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 R P + ++G AL LAR+ + L Sbjct: 311 RGNAGAPRAPETPEQRARREQG-DAL---------GEQGLARQREGRQDEARALFERALT 360 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A + ++ + + + G + A +AL Sbjct: 361 L-----------DPDNARK-WRSLIATAT--LWGTIAKANTANSQGKPAEGEALAREALR 406 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGD 241 P A++ + ++W A + + R ++ I R+ ++ D Sbjct: 407 QDPSNVIAQRALIDALIAQQKWPEAEAVARPLATAAKPDIDALRDLVTILRATHRENEID 466 Query: 242 MIAS---YHDAIESLKLCDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNP 291 + + A + + A++ + A+ +++ A LE+ ++ P Sbjct: 467 PLMASVSPRLASSGSQAQLARMRATVLSLQAQQSMTEKNNSAAIAKLEEAVRLTP 521 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 45/108 (41%), Gaps = 6/108 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+A + + + H ++L + A + + N+ + A L+++ + Sbjct: 66 LLASARKWEGMNRPDMARHVIKKALLISPQQPEALAMMGEIELKSNRIKDAAKYLQQLRQ 125 Query: 289 VNP-HP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + P HP E+A+ Y + + G++ + +L + + S + + Sbjct: 126 IAPNHPATQELADAYRLVTTG--KGEIAQIEKLAAAGQHAQASQRLQA 171 >gi|325089701|gb|EGC43011.1| pre-mRNA-splicing factor Clf1 [Ajellomyces capsulatus H88] Length = 676 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185 A + + ++P ++ A++ Y + GD +Y + + +P Sbjct: 260 ERARAIYKYALDRLPRSKSIALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQVKENP 318 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239 + V+ + + R + R L I +L E + Sbjct: 319 KNYDIWFDFVRLEESSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELET 378 Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 DM + E +KL + A+ I Q + A L P ++ Sbjct: 379 KDMDRARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQTARKTLGHAIGACPKDKL 438 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y + E + K + + N + ++ + +++ + ID+A A L + Sbjct: 439 FKGYIDIERQLFEFVRCR-KLFEKQIKWNPANCQAWIKFAELERGLDDIDRARAIYELGI 497 >gi|313201762|ref|YP_004040420.1| hypothetical protein MPQ_2031 [Methylovorus sp. MP688] gi|312441078|gb|ADQ85184.1| Tetratricopeptide domain protein [Methylovorus sp. MP688] Length = 559 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 99/312 (31%), Gaps = 61/312 (19%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL------------LEVQIALAE-----RQ 135 ++ ++ + LA + + LV E Q A E + Sbjct: 65 LAKSSRDPRLAERAAKAA---VYGNKPRLVSQAVSLWSELDPSSTEAQQASTELFVNAGK 121 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 N A L+ +L TR L + D N+ + PD P + Sbjct: 122 LNEAKPFLQKLLAKEDTRANGFLYLNSLLAKQTDKNAVLTLVQELAAPYPDLPEAHFTIA 181 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + A + A++ L+ +K + W + LL + L I Y + + + Sbjct: 182 NSALAAGKVELAMSELDTAEKLSPGWE--MSALLKGQILYLQSPDAAINFYKQFLSANEN 239 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + + A+ LI+Q + + E + Sbjct: 240 ANEVR---LTMARLLINQKR-----------------------FDEAKPE--------FI 265 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK---IAPRKEIFLLLAQIEQANS 372 +L +K + E +V+V ++++ + A A+ P + +F+ L QI + Sbjct: 266 KLISASKNNPEIMVVVGLLSIQANELGDAEKYFQDALAAGFKNPDQ-VFIYLGQIAEKQ- 323 Query: 373 HNTDKILYWTQS 384 ++ L W Sbjct: 324 NDDKLALAWYNR 335 >gi|283786161|ref|YP_003366026.1| TPR-domain protein [Citrobacter rodentium ICC168] gi|282949615|emb|CBG89234.1| putative TPR-domain protein [Citrobacter rodentium ICC168] Length = 1084 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 92/328 (28%), Gaps = 43/328 (13%) Query: 91 GLMSIAAHNIPLARKMHSYV--SQQHTFHNE---YLVYLLEVQIALAERQYNIAHEKLEM 145 G +++ + LA + N LL + Y+ A E Sbjct: 497 GTLALNRADWTLAERCARAALERAHRLNKNPRDGEASMLLAA-ALERQGNYDDAREHYYK 555 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 R+ A +SL + R + A T++L + S Sbjct: 556 ASWSGNCRDAAFWSLARIAMRRENYADALEKVTQSLRFNASNNLAMGMRALALAKLGRAS 615 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ + Q+ K+ + + + + AI + A Sbjct: 616 EALNYAEQQLKDYPLSYVLH------YARWAIGRDEAAKAALIAITGRRG----TNACEL 665 Query: 266 AAKSLI--SQNKKRKAEVILEKI------WKV----NPHP--EIANIYT--HLLSENTVG 309 A L Q R+A +L+ W+ NP P + A + NT+ Sbjct: 666 AGWLLSCGQQEAAREALELLDSQETLPLLWRASLSDNPQPLIDQARACLRNRVRFPNTLD 725 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA----KAMLAMKIAPRKEIFLLLA 365 +++ L +S + ++ D+A A AP + + A Sbjct: 726 EVQMLQTL----PQSAYAQYLLGCFWYSKRRYDEALACWQFTLRQEASFAPVHRLLGIYA 781 Query: 366 QIEQANSHNTDKILYWTQSALHAMPDPL 393 + + + A+ P+ Sbjct: 782 ---WNKHQDAGQARRYLAQAVALEPENA 806 >gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif Length = 91 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 28/66 (42%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + Y+ A E + L++ A Y+L + GD + A Y KAL++ P+ Sbjct: 18 AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 Query: 189 WVTEAV 194 + + Sbjct: 78 EAKQNL 83 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + GD + A Y KAL++ P+ + Y ++ AI + + Sbjct: 21 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKAL 70 >gi|88807129|ref|ZP_01122641.1| hypothetical protein WH7805_11298 [Synechococcus sp. WH 7805] gi|88788343|gb|EAR19498.1| hypothetical protein WH7805_11298 [Synechococcus sp. WH 7805] Length = 402 Score = 44.5 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 13/146 (8%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE---SLKLCDNSIMASICAAKSLISQ 273 + R +L + +L D + Y A++ ++L A + A L+ Sbjct: 234 AGRTAERYELLLNLGIALAPEDADAAESYYRQALDLALDVRLSLG---ARLNLAALLMQA 290 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESL 328 N+ +A + + PE+A + +L + L+ R E+N + ES Sbjct: 291 NQLDEAIQLTTTACQRA--PEVALAWYNLGLMERRRGDLAASLRAYERSLELNPDHAESH 348 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKI 354 + L G ID A A A+ Sbjct: 349 QNFAVARLMGGDIDGARASFRAAIDK 374 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 1/157 (0%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQY 136 + Y+ L +++A + A + L L + + Q Sbjct: 234 AGRTAERYELLLNLGIALAPEDADAAESYYRQALDLALDVRLSLGARLNLAALLMQANQL 293 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + Q A Y+L R GDL ++ R ++L+++PD + Sbjct: 294 DEAIQLTTTACQRAPEVALAWYNLGLMERRRGDLAASLRAYERSLELNPDHAESHQNFAV 353 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 ++ + A ++ NR + + Sbjct: 354 ARLMGGDIDGARASFRAAIDKLRQQNRAKEAGALQAQ 390 >gi|325206293|gb|ADZ01746.1| tetratricopeptide repeat protein [Neisseria meningitidis M04-240196] Length = 612 Score = 44.5 bits (104), Expect = 0.042, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 51/309 (16%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + VL + ++ + L + A E R LL+A++ D Sbjct: 129 EPIPGEAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLLAQAAVQQDGLAQ 188 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------------- 288 AS +LK + + A Q +++ KA L+++ K Sbjct: 189 KASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILPPTLMTL 246 Query: 289 ---VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEINKESVE 326 +PEI + + +++ ++ +L R L E N + Sbjct: 247 RLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLERNPNAD- 305 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHNTDKILY 380 + + A+ + + + + A ++ L A + A+ + K+ Sbjct: 306 ---LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRSRAALTAAMMYADRRDYAKVRQ 362 Query: 381 WTQSALHAM 389 W + + A Sbjct: 363 WLKK-VSAP 370 >gi|323524675|ref|YP_004226828.1| tetratricopeptide repeat-containing protein [Burkholderia sp. CCGE1001] gi|323381677|gb|ADX53768.1| Tetratricopeptide repeat [Burkholderia sp. CCGE1001] Length = 613 Score = 44.5 bits (104), Expect = 0.042, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 103/328 (31%), Gaps = 54/328 (16%) Query: 110 VSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYF 162 +Q N L +L ++AL Q A++ + + A + + Sbjct: 69 AEEQKALPNVQLTSQIVFQVLAAEVALQRNQPAPAYQTYLALARDTHDPRMAQRATEIAL 128 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + D +A + +P + + VL+ + A L ++ N Sbjct: 129 AAQSPSDALAAAQLWQ---QYAPSSERAAQLDASLLVLSGKPDDAEPLLARELAKVPADN 185 Query: 223 RNRAILLI--------------------------------ARSLENADKGDMIASYHDAI 250 R AIL + A + + D + Sbjct: 186 RGNAILALQLLLSRGPNRIGGLHVLQDMLKNDMNRPEAQLAVARQQLVADDAPGARKSLE 245 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENT 307 ++L L + + A++ ++ ++++ LEK + NP H +A +L S+ Sbjct: 246 QALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRL 303 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRK---EIF 361 K+ + + N + L+ ++ I ++ + + A + P + + Sbjct: 304 DDAQKQFEIMHKANANDLTPLMALALIKIQQKNFNDAQTYLTQYAQQAEKTPGADPGQAY 363 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAM 389 + LAQ+ N W A Sbjct: 364 IYLAQL-SLEQKNDAAAADWLDKISPAS 390 >gi|262275587|ref|ZP_06053396.1| putative lipoprotein [Grimontia hollisae CIP 101886] gi|262219395|gb|EEY70711.1| putative lipoprotein [Grimontia hollisae CIP 101886] Length = 481 Score = 44.5 bits (104), Expect = 0.042, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 79/244 (32%), Gaps = 16/244 (6%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-QYNIAHEKLEMMLQ 148 G +++ A + L++ T E + L + A + M++ Sbjct: 84 KGRLALLAGDTALSKTSFERADIAATKQQEAAIIQLS------QGVDQLGALITNDNMIR 137 Query: 149 -IPATREFAVYSLYFES--CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 P E LY + D+ A +A + A + + ++ + + Sbjct: 138 YTPPDYELGFLHLYLTLGYLQNNDVQGALVEVRRANLVQERARKIRQDELESASRTAQQN 197 Query: 206 RAITFLNQKKKNAKEWN-----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 L + L +L +G++ +++ D ++ + ++ Sbjct: 198 GINENLGAVLSRYPDAGQTLGFVQNGYLFYLSALLYEAEGNLNSAFIDYSRAMAVEPDNK 257 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 + A + Q + R +LEK + P+ + +LSE V + RL Sbjct: 258 YIAEAAMRIAFRQGR-RDELRLLEKQYGKYQRPDRSKGQLVILSEQGVVNARDFWRLPLW 316 Query: 321 NKES 324 +S Sbjct: 317 LPDS 320 >gi|330917372|ref|XP_003297789.1| hypothetical protein PTT_08308 [Pyrenophora teres f. teres 0-1] gi|311329345|gb|EFQ94118.1| hypothetical protein PTT_08308 [Pyrenophora teres f. teres 0-1] Length = 1142 Score = 44.5 bits (104), Expect = 0.042, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 18/178 (10%) Query: 130 ALAERQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A R + A E +L+ T L E + A + KAL P Sbjct: 152 YQAPRNHAEAKAIFESILKRKPQFTAALIGIGLVLEEEQE--YGQAFEFLEKALQQDPSN 209 Query: 188 PWVTEAVVQQYVLAKEWSRAIT---------FLNQKKKNAKEWNRNR----AILLIARSL 234 + LA ++ + L+ K+ +E + L Sbjct: 210 GRIGAESAWCQALAGDYKTGLERLQGYLDYPELDASKQRGRELRAQTLYRIGVCLWELDP 269 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP 291 A + D +Y + ++K+ N A N+ RK A +K ++++P Sbjct: 270 SKAARKDRQRTYAKLLAAIKVNPNYAPAYTLLGIFYEDYNRDRKRARQCFQKAFELSP 327 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 79/223 (35%), Gaps = 32/223 (14%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN 212 + +++E D A++ KA ++SP E + + + EW + ++ Sbjct: 300 LLGIFYEDYNR-DRKRARQCFQKAFELSPSEVVAAERLARLFANQGEWDIVEVVSQRVVD 358 Query: 213 QKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K ++ + + +L +K + S + +L++ + + + +S Sbjct: 359 SGKARQTPGSKRKGVSWPFSALGVVQMNKQEYQKSIVSFLSALRISPDDYYSYVGLGESY 418 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + + A + + + LKR ++E + + Sbjct: 419 HNSGRYNSASR----------------AFNYAENPTDGVVLKR------TDEERWFTKYM 456 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370 ++ + E+ D+A + + P++ I LL +E+A Sbjct: 457 LANVNRELSEYDEAISGYEAVLADRPKEFGVSIALLQTLVEKA 499 >gi|113478135|ref|YP_724196.1| sulfotransferase [Trichodesmium erythraeum IMS101] gi|110169183|gb|ABG53723.1| sulfotransferase [Trichodesmium erythraeum IMS101] Length = 887 Score = 44.5 bits (104), Expect = 0.042, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 89/246 (36%), Gaps = 27/246 (10%) Query: 126 EVQIALAERQYNIAHEK-LEMM---LQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKA 180 + +I LA+ + A + + P T + R+G+++ A+ + KA Sbjct: 13 KAEIYLAQGKLEAAITACYQALEIEQNFPLTCKILG-----NILQRMGEIDKAKEWYIKA 67 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADK 239 + P+ + Y K+W AI + R + I + L+ + Sbjct: 68 ISQQPNLAEAHANLGSIYAQQKQWHLAIECYREAIGIKPNIPGFYRNLGKIWQELDKVEL 127 Query: 240 GDMIASYHDAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 ++E+ + + K L+ ++ +A +K +N +P + Sbjct: 128 ARDCQEQALSLEAHY------PQASKYLKQGKKLLENGEREEAIAYFQKA--INFNPSLV 179 Query: 297 NIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + Y L +++ + + E+ + + K+ E+G +D A + LA Sbjct: 180 DAYQNLGDISLKTKDFNEAINYYQKAIELKPDLWIVHYKLGKLFQEIGELDTATIEFNLA 239 Query: 352 MKIAPR 357 +++ P Sbjct: 240 IELNPS 245 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 78/213 (36%), Gaps = 33/213 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +++N A ++I ++ Y+L ++ + + A A++ +P++PW + Sbjct: 431 KRWNQAIVAYRQAIKIKPDSYWSHYNLGEIFLKLQEWDKAVETYRYAIENNPNSPWYYQY 490 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI + + +W+R ++L + GD + I+++ Sbjct: 491 LGIVLRKQGKIQEAIACYRKAIEIKPDWHRFYSLL----GDILLEIGDSEEAISCYIKAI 546 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--EIANIYTHLLSENTVGKL 311 KL N + A + L + I + ++ PH E+ Y + Sbjct: 547 KLQPN----ATAAYRQL-------RGIYIFKLA-QLRPHQLNELVKCYQEAI-------- 586 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 ++ E + ++ I G +D A Sbjct: 587 -------KLQPNFPEVYINLADILTGKGELDTA 612 >gi|218663223|ref|ZP_03519153.1| adenylyl cyclase class-3/4/guanylyl cyclase [Rhizobium etli IE4771] Length = 402 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 63/218 (28%), Gaps = 40/218 (18%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIG-----------------------------D 169 A E+ + ++ P A LY ++ + D Sbjct: 146 ARERFKHDIKDPDG-LLAARGLYQQALELDPSYAAARAGLGMTYILDMTQRVTGRATERD 204 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A +++ + P + V ++ A+ Q + + E N N L Sbjct: 205 AEIGLSEARQSIRLDPTLAIGYQVVSFGLSATGDYLGAL----QAARRSVELNPNDPDSL 260 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKKRKAEVILEKIW 287 +A + GD + A ++ +L + ++L + ++ +A ++ + Sbjct: 261 MAVAKAQVRYGDYADAVASAEQARRLHP-MAPEYYAYVHGQALYAAGRRDEAANVIRECL 319 Query: 288 KVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINK 322 P + E+ L + N Sbjct: 320 IRAPQDANCLLIQTALQAAREDLGDAQASMTSLIKANP 357 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 4/189 (2%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + +A+ + + R A + D +A +S++L Sbjct: 159 GLLAARGLYQQALELDPSYAAARAGLGMTYILDMTQRVTGRATERDAEIGLSEARQSIRL 218 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE--IANIYTHLLSENTVGKLK 312 + + L + A + ++NP+ P+ +A + + + Sbjct: 219 DPTLAIGYQVVSFGLSATGDYLGALQAARRSVELNPNDPDSLMAVAKAQVRYGDYADAVA 278 Query: 313 RALRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 A + ++ + E V + G D+A + AP+ LL+ QA Sbjct: 279 SAEQARRLHPMAPEYYAYVHGQALYAAGRRDEAANVIRECLIRAPQDANCLLIQTALQAA 338 Query: 372 SHNTDKILY 380 + Sbjct: 339 REDLGDAQA 347 >gi|149417764|ref|XP_001521187.1| PREDICTED: similar to tetratricopeptide repeat protein, partial [Ornithorhynchus anatinus] Length = 547 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 16/173 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ AT V L + A ++ +A Sbjct: 232 KILKAECLALLGRYPEAQSVASDILRVDATNADALYVRGLCL--YSEDCIEKAVQFFVQA 289 Query: 181 LDISPDAPWVTEAVVQQYVLA------------KEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A L ++ +A + + A L Sbjct: 290 LRMAPDHEKACVACRNAKALKAKKDDGNRAFKDGDYKQAHELYTEALAIDPNNIKTNAKL 349 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R+ NA + + D +++L D+ I A + A+ + + +A Sbjct: 350 YCNRATVNAKLRKLEDAIEDCTSAVRLDDSYIKAYLRRAQCYMDTEQFEEAVR 402 >gi|300822073|ref|ZP_07102216.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7] gi|300525436|gb|EFK46505.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7] Length = 803 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 43/352 (12%), Positives = 103/352 (29%), Gaps = 67/352 (19%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ + AV L + I D+ + + A +A Sbjct: 410 QTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 + + +A + + +L + + + A L Sbjct: 530 EQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQV---LETANRLRES 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 K+ +AE +L + P P ++ + + T + L + +++ Sbjct: 587 GKEAEAEAML----RQQP-PSTRIDLTLADWAQQRRDYTAARAAYQNVLTR-EPTNADAI 640 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + ++++ + G A ++ + QA +T Sbjct: 641 LGLTEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQ 692 Score = 43.8 bits (102), Expect = 0.072, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L T A+ L Sbjct: 584 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGL 643 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 644 TEVDIAAGDTAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKS 703 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 704 QPPSMESAMVLRDGAKFEAQAGDPKQALETYKDAM 738 >gi|149377483|ref|ZP_01895225.1| CheY-like receiver protein [Marinobacter algicola DG893] gi|149358250|gb|EDM46730.1| CheY-like receiver protein [Marinobacter algicola DG893] Length = 546 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 88/281 (31%), Gaps = 31/281 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKL------EMMLQI 149 + + + + L ++ + + + + ML+ Sbjct: 71 GEGKNGQHILEELRHKKLLKRSSLFLMVTAETSKEMVMGAREYQPDGYLTKPINRAMLEK 130 Query: 150 PATREFAVYSLYFESCRIGDLN---SAQRYATKALDISPDA-PWVTEAVVQQYVLAKEWS 205 A + R D A + L P W+ + + Y ++S Sbjct: 131 RLGGLIAQRNALLPINREIDRENFPEAISLCLQTLPSQPRYKTWLMKTLADLYYQVGDFS 190 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ + R+ + + R + + E + + + A Sbjct: 191 HALKIHDDVLS-----QRDLSWARLGRGKILIANQNYDDAAATLKELVSQHPDYMEAYDL 245 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEI 320 A++L Q + +A+ ILEK + +P H +A + + +++ K + + Sbjct: 246 LAEALEKQGRPTQAQQILEKAAEHSPNALLRHKHLATLASS--NQDMPTASKAWRQTVSL 303 Query: 321 NK----ESVESLVIVSKIALEMGSID---QAHAKAMLAMKI 354 ++ E + + + ++ D +A A A A+ I Sbjct: 304 GTYSIHDNSEHYLALGQSLSDLSEGDSSSEAAAHADEALTI 344 >gi|116623643|ref|YP_825799.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226805|gb|ABJ85514.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 548 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 95/319 (29%), Gaps = 43/319 (13%) Query: 82 DKGYKA---LYTGLMSIAA---HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 + ++A ++ + H+ + F N + + Sbjct: 121 RRAFEADASRSDAMLGLGIALIHDGHPGDALMPLEKYLSLFPNHEQALFGQAVALQQTGR 180 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 + + E+ +L E A+ +L D S +RYA ++ PD+P TEA+ Sbjct: 181 HAESVEQYRKVLSRNPKCEEALSNLVAMFIEKKDHESVRRYAEMLCELQPDSPVATEALA 240 Query: 196 QQYVLAKEWSRA--------------------ITFLNQKKKN---AKEWNRNRAILLIAR 232 ++ A + + K N A + R A L + Sbjct: 241 TLAFQDGDYLSAARHCRTLCESAPDRFENWFNLGVAHHKMGNYDKAAQAYRQAASLQPSS 300 Query: 233 SLENADKG-------DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + + + G D+ + +L + N A L Q +++ AE + + Sbjct: 301 AQSHLNLGVAQQELNDLAGARASYEHALNIDPNQSGVLWNLALVLEQQGERQWAEKLYAR 360 Query: 286 IWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 I PE + Y LL + + + + E+ + G+ Sbjct: 361 I--NEDAPEWGDACFRLGYLRLLRGDYINSAEAFEACLAHRLDWPEAHLNAGIAYARNGN 418 Query: 341 IDQAHAKAMLAMKIAPRKE 359 A + + P Sbjct: 419 APAARKSFQEVLTLRPDSS 437 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 26/243 (10%), Positives = 75/243 (30%), Gaps = 8/243 (3%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 + ++ + + + L +A + Y A + + R ++L Sbjct: 219 RRYAEMLCELQPDSPVATEAL-ATLAFQDGDYLSAARHCRTLCESAPDRFENWFNLGVAH 277 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 ++G+ + A + +A + P + + + + A +A + N Sbjct: 278 HKMGNYDKAAQAYRQAASLQPSSAQSHLNLGVAQQELNDLAGARASYE----HALNIDPN 333 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 ++ +L +L +G+ + + A + + + E Sbjct: 334 QSGVLWNLALVLEQQGERQWAEKLYARINEDAPEWGDACFRLGYLRLLRGDYINSAEAFE 393 Query: 285 KIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P + + + N K + + +S +++ ++ +ALE Sbjct: 394 ACLAHRLDWPEAHLNAGIAYARNGNAPAARKSFQEVLTLRPDSSDAVRGLAALALEQEEF 453 Query: 342 DQA 344 +A Sbjct: 454 TEA 456 >gi|116624132|ref|YP_826288.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116227294|gb|ABJ86003.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 427 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 57/200 (28%), Gaps = 8/200 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + D A K + + PD A +A + + AI + + + N Sbjct: 144 MELSDYGGAADAYQKMVQLRPDLASYNRAAY-YRFVAGDANGAIEVMKRAIDSGSRSAEN 202 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L+ G + +L+L A K + K+ +A Sbjct: 203 IAWCLVDLGNMELKTGRAAEAGEAFGAALRLFPGYYPALAGMGKLKAQEGKRAEAIGYYV 262 Query: 285 KIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K P P+ A E + R +E + + +AL Sbjct: 263 KAQAAVPLPDYAAALEDLYEAEGKPEEARKQAARLAVIERM--DQAAGFTANRNLALAYA 320 Query: 340 SIDQAHAKAMLAMKIAPRKE 359 ++ A+ ++ + Sbjct: 321 DHERNAEHALAMIREEMKTR 340 >gi|312131657|ref|YP_003998997.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] gi|311908203|gb|ADQ18644.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] Length = 516 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 69/211 (32%), Gaps = 35/211 (16%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLI---- 230 K +++ PD ++ + +++A+ + +K R + I+L+ Sbjct: 113 EKWIELRPDDEEPYLEWLEYQSASGNYAQALKIIGLAEKKWGSSERIIKAKQIILMKDNK 172 Query: 231 --ARSLENADKGDMIASYHDA---------IESLK-----LCDNSIMASICAAKSLISQN 274 A E + D + A E++K L + + I + Sbjct: 173 VEAALQEGSKVQDPAFALDQAKLLIQNQKTKEAIKTLSGSLSASLPESYILLGDLYSKEG 232 Query: 275 KKRKAEVILEKI-------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 +K + E +LEK + H + I E K A +L + E + Sbjct: 233 RKEEVEGLLEKALTETGLSYDAKVH--LTRIVAQWSGEKAG---KAAEQLIKETPEQGRA 287 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +I + G + +A A++ + Sbjct: 288 YLIAGDYNYKSGDLPKARDYYEKAVQKDKSQ 318 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 17/183 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + GDL A+ Y KA+ V +A+++ +W +Q + Sbjct: 297 KSGDLPKARDYYEKAVQKDKSQFEVWKALLETNFGLGDWQALEKSADQASIYFPSQGQVW 356 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L +A+ + D SLK AA + +K+K Sbjct: 357 LYLGLAQIMLGEDASMSFEEAQQWDSSLKE----------AASIGLQWAEKKK------V 400 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 +W P + + + +L + T ++ A L + V++++ ++ +++A Sbjct: 401 VWSKVPS-DPFSQFLYLKTGGTENRVAIAGTLSANYPSAPLFKVLLAESLMDSNKLEEAE 459 Query: 346 AKA 348 Sbjct: 460 KTL 462 >gi|262305041|gb|ACY45113.1| acetylglucosaminyl-transferase [Stenochrus portoricensis] Length = 290 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GLVQEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ ISP + + A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 15/168 (8%) Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A + AL + P + A + + E+ A Sbjct: 36 VQEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAH 91 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + +G + + E++++ A +L + A + ++ Sbjct: 92 SNLASVLQQQGKLNEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQI 151 Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 NP H +A+I H S N + ++ + ++ ++ Sbjct: 152 NPAFADAHSNLASI--HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 197 >gi|262304977|gb|ACY45081.1| acetylglucosaminyl-transferase [Dinothrombium pandorae] Length = 287 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A ++ + H + L L I + A L + A Sbjct: 34 GHVNEAEDCYNTALRLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALDVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L A + +A+ ISP + + A+ + + Sbjct: 92 SNLASVLQQQGKLTEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDAYCNLAHCL 200 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 47/158 (29%), Gaps = 11/158 (6%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL + P + A + E+ A + + Sbjct: 46 ALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALDVFPEF----AAAHSNLASVLQQQ 101 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 G + + E++++ A +L + A + ++NP H Sbjct: 102 GKLTEALLHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSN 161 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A+I H S N ++ ++ E ++ ++ Sbjct: 162 LASI--HKDSGNIPEAIQSYKTALKLKPEFPDAYCNLA 197 >gi|218780752|ref|YP_002432070.1| hypothetical protein Dalk_2912 [Desulfatibacillum alkenivorans AK-01] gi|218762136|gb|ACL04602.1| Tetratricopeptide domain protein [Desulfatibacillum alkenivorans AK-01] Length = 622 Score = 44.5 bits (104), Expect = 0.043, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 55/181 (30%), Gaps = 19/181 (10%) Query: 130 ALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESC--RIGDLNSAQRYATKALDIS 184 A ++ A E+ L+ A+ LY + + D + + A K L Sbjct: 384 AYRNDKFARAEEEFNAALEVLPDYPKALAALTYLYANAKDSAVKDPKKSLKIAEKVLKFR 443 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWNRNRAILLIARSL-ENADKGDM 242 P P+V +A Y + A+ + K + R+L Sbjct: 444 PCYPYVWDAASAAYYENGDLDNALECQDNAYGKYSSPPKSYIEKTAEYRALRAQFQDAKT 503 Query: 243 IASYHDAIESLKL-------CDNSIMASICAAKSLISQNKKR-----KAEVILEKIWKVN 290 + +E++K+ + A A+ L + + A E + + Sbjct: 504 LYRQERYVEAIKILQETLEKMPQYVDALDLFARILSTAKDPKFISPAMAIKYAEVAYALA 563 Query: 291 P 291 P Sbjct: 564 P 564 >gi|300313205|ref|YP_003777297.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] gi|300075990|gb|ADJ65389.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] Length = 600 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 79/242 (32%), Gaps = 17/242 (7%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L +L +IA Q+ A + M+ TR+ + R ++ R ++A Sbjct: 70 LYKVLTAEIAFQRGQWQPA--YVTMLAAAQQTRDP------RLAKRAAEMAVTARQPSEA 121 Query: 181 L-------DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 L +++P + + + +L+ L Q+ +A R +L I R Sbjct: 122 LVAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRL 181 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L A + I + + + A+ S A+ K+ P Sbjct: 182 LVRAKDKQASFAILQKISQPYG--DLMETHLALAQGAFSVGDTTYAQREARAAMKIKPDS 239 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 E+A + ++ + K ++ E V ++ +E A + +K Sbjct: 240 ELAVLTAAQVAPDNKEATKLVTEFLRKYPDAREVRVAYARTLVEQKDYKDARTQFEALLK 299 Query: 354 IA 355 Sbjct: 300 ED 301 >gi|296109098|ref|YP_003616047.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus infernus ME] gi|295433912|gb|ADG13083.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus infernus ME] Length = 317 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 12/188 (6%) Query: 113 QHTFHNEYLVYLLEVQIALAER--QYNIAHEKLEMMLQ-IPATREFA-VYSLYFESCRIG 168 + + LL + +Y A +E L+ P R + R+G Sbjct: 135 RLLIKYPDSLLLLTKKAYALRGLGRYEEALSVIEKGLELDPDNRVLLYMKGSLL--RRLG 192 Query: 169 DLNSAQRYATKAL-DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 + + A K + +++ + +V ++ ++ A+ + K E + Sbjct: 193 NYHKAYETFKKLIDELNVRWLDAIKHLVSLCLVLGKFDEAVKY----AKMGLEIRDDDTT 248 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L + G+ + + L +++ A + A+ + + KA EK Sbjct: 249 LWYYLGQAYEELGEENKAIEAYNRCVALYPDNVRALLNLARLYEERGEMEKAVNHYEKAM 308 Query: 288 KVNPHPEI 295 H +I Sbjct: 309 AKR-HKDI 315 >gi|189200925|ref|XP_001936799.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983898|gb|EDU49386.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1142 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 14/176 (7%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A R + A E +L+ A+ + + A + KAL P Sbjct: 152 YQAPRNHAEAKAIFESILKRKPQFTAALIGIGLVLEEEQEYGQAFEFLEKALQQDPSNGR 211 Query: 190 VTEAVVQQYVLAKEWSRAIT---------FLNQKKKNAKEWNRNR----AILLIARSLEN 236 + LA ++ + L+ K+ +E + L Sbjct: 212 IGAESAWCQALAGDYKTGLERLQGYLEYPELDASKQRGRELRAQTLYRIGVCLWELDPSK 271 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP 291 A + D +Y + ++K N A NK RK A +K ++++P Sbjct: 272 AARKDRQRTYAKLLAAIKANPNYAPAYTLLGIFYEDYNKDRKRARQCFQKAFELSP 327 Score = 36.8 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 78/223 (34%), Gaps = 32/223 (14%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN 212 + +++E D A++ KA ++SP E + + + EW + ++ Sbjct: 300 LLGIFYEDYN-KDRKRARQCFQKAFELSPSEVVAAERLARLFANQGEWDIVEVVSQRVVD 358 Query: 213 QKKKNAKEWNRNRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K ++ + + +L +K + S + +L++ + + + +S Sbjct: 359 SGKARQTPGSKRKGVSWPFSALGVVQMNKQEYQKSIVSFLSALRISPDDYYSYVGLGESY 418 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + + A + + + LKR ++E + + Sbjct: 419 HNSGRYNSASR----------------AFNYAENPTDGVVLKR------TDEERWFTKYM 456 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370 ++ + E+ D A + + P++ I LL +E+A Sbjct: 457 LANVNRELSEYDDAISGYEAVLADRPKEFGVSIALLQTLVEKA 499 >gi|170721170|ref|YP_001748858.1| TPR repeat-containing protein [Pseudomonas putida W619] gi|169759173|gb|ACA72489.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas putida W619] Length = 764 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 83/317 (26%), Gaps = 58/317 (18%) Query: 100 IPLARKMHSYVSQQHTFHN---EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + + F L LE AL A ++ PA R Sbjct: 467 GKPAIVRATAADRLADFGGAALPSLSKALEDHSALV---RAYAVSGFTVLT--PAQRVVH 521 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L + R + + A L P A + + Q+ Sbjct: 522 LLPLLNDPLRAVRDEAIRALADIPLAALPS---ARRAGFRAQ---------LQEYEQRLH 569 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + NR + ++ +G + + ++L++ A + A Sbjct: 570 ANADLPGNR----LNLAVFLERRGRELEAMEQYRQALRMDPYFSPARVNLAALASRTLHM 625 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSK 333 +AE +L K L + A L + + ++ V +++ Sbjct: 626 DEAERVLRKG-------------ISLQDIPKADRANLAYMLALLLVERGQPEDAAVYMAE 672 Query: 334 IALEM-----------------GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSHNT 375 A + A + AP L L + + Sbjct: 673 AAEAAPQNTRIRYNQGLLLLQLRQSEAARKALEAGLSQAPADSDLLYALIYLHSVSGGRE 732 Query: 376 DKILYWTQSALHAMPDP 392 + YW Q L + DP Sbjct: 733 QAVRYWRQLRLVSPNDP 749 >gi|147920898|ref|YP_685295.1| O-linked GlcNAc transferase [uncultured methanogenic archaeon RC-I] gi|110620691|emb|CAJ35969.1| predicted O-linked GlcNAc transferase [uncultured methanogenic archaeon RC-I] Length = 368 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 11/205 (5%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y +G+ A K++++ P + + ++ RAI ++ + Sbjct: 123 YGRARALAALGETQEAIACLEKSIELEPFNADMWQYRGACECSMGDFDRAIRSFDRAIEI 182 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + ++ A GDM S + + + A + + ++ K Sbjct: 183 NPDHGK----AWCGKAEVLASMGDMTGSLRCYDRASAVAPSLPDAWLGKGRLMLLSEKYE 238 Query: 278 KAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A K ++ P++++ + + E ++ + E+N + + + Sbjct: 239 EAAGAFRKAAEIA--PDLSDAWLYQGWAQEMQERAEEAIEAYSKAIELNPGNHMAWYMKG 296 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 + M D A A++I P Sbjct: 297 VLLGRMEKYDAAVECFDAAIEIYPD 321 >gi|77163723|ref|YP_342248.1| hypothetical protein Noc_0185 [Nitrosococcus oceani ATCC 19707] gi|254436150|ref|ZP_05049657.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani AFC27] gi|76882037|gb|ABA56718.1| TPR repeat protein [Nitrosococcus oceani ATCC 19707] gi|207089261|gb|EDZ66533.1| tetratricopeptide repeat domain protein [Nitrosococcus oceani AFC27] Length = 387 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 93/292 (31%), Gaps = 59/292 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI-------ALAERQYNIAHEKLEMMLQIP 150 + A ++H YL Q + + A +L+ Sbjct: 83 GEVDRAIRVHQN-----LIERPYLSSSQRGQALLELGLDYMRAGMLDRAESSFLEVLKRR 137 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS--RAI 208 + + L + + + A A K + S +A A + + W+ +A+ Sbjct: 138 SHIGITLRQLLDLYQQEKNWHQAIAMAQKLHEESGEATESMIAHFYCELAEQHWAQKKAV 197 Query: 209 TFLN-QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 K+ A +W RA LL +S +KGD + + + + + Sbjct: 198 ETTRFIKQALASDWRCVRATLL--QSSLAMEKGDYKRAIRCLRQVERQDPDYLP------ 249 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE- 326 IL+ ++ Y +L ++ K L E +K Sbjct: 250 -------------EILKP---------LSECYQYLEGQD-----KFFFWLTEASKRHPGC 282 Query: 327 SLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-----QIEQA 370 + +++++ A + G +A + +++ P E LLA IE A Sbjct: 283 TSLVLARAAYLQQRGEQKEARYFLIEQLRVYPSVEALQQLLALGVPEDIEAA 334 >gi|325139975|gb|EGC62504.1| tetratricopeptide repeat protein [Neisseria meningitidis CU385] Length = 616 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 74 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 133 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 186 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 187 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 244 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 245 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 304 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 305 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 360 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 361 YAKVRQWLKK-VSAP 374 >gi|116329905|ref|YP_799623.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116123594|gb|ABJ74865.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 1197 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 5/179 (2%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 +Y G + +I A+ + + E VY ++ + E + L Sbjct: 419 IYEGDKHLRQGDIKGAKVFYEKAKK--ASSEEPSVYNAFGRLYFISGDPKSSEENFKKAL 476 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 I A+ L + N +Y + +++ + P + + Y KE+ +A Sbjct: 477 SINKQNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536 Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 L +K N + N A+L SLE +K + ++ + ++ KL + + Sbjct: 537 ENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNWISKAEKLTKDIPEIA 595 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 83/244 (34%), Gaps = 23/244 (9%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L ++ G+ A Y TKA ++ +V + + A K+ Sbjct: 347 GLNMKAL--GEPAKALVYFTKARELDSAFAEPVTNLVFLLIAENRYKAARKEAES-LKSE 403 Query: 219 KEWNRNRAILLIARSL----ENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQ 273 E + + + ++ + ++ +GD+ + ++ K + A + Sbjct: 404 SEKKQIISFIDVSEQIYEGDKHLRQGDIKGAKVFYEKAKKASSE-EPSVYNAFGRLYFIS 462 Query: 274 NKKRKAEVILEKIWKVNPH--PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + +E +K +N P + +Y+ ++N V + LE + + Sbjct: 463 GDPKSSEENFKKALSINKQNIPALQGLIRLYSSQKNQNLVNQYT--KELENLTGNDPSAA 520 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----EIFLLLAQI--EQANSHNTDKILYW 381 +++ + + ++A K P + +L +I E+ +N D L W Sbjct: 521 IVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNW 580 Query: 382 TQSA 385 A Sbjct: 581 ISKA 584 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 96/269 (35%), Gaps = 38/269 (14%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL A A + + + E + L+ + IA +Y A ++ E + Sbjct: 347 GLNMKALGEPAKALVYFTKARELDSAFAEPVTNLVFLLIAE--NRYKAARKEAESLKSES 404 Query: 151 ATREF------------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 ++ L R GD+ A+ + KA S + P V A + Y Sbjct: 405 EKKQIISFIDVSEQIYEGDKHL-----RQGDIKGAKVFYEKAKKASSEEPSVYNAFGRLY 459 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCD 257 ++ + + + K A+ + R + +++ Y +E+L Sbjct: 460 FISGDPKSSEENFKKALSINK--QNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDP 517 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL--------LS 304 + A+I ++ + + KAE + + + K P+ E +A +Y + Sbjct: 518 S---AAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNH 574 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK 333 ++ + + +A +L + E E+ + + Sbjct: 575 DSALNWISKAEKLTKDIPEIAETRKTIQE 603 >gi|116329495|ref|YP_799215.1| TPR repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122239|gb|ABJ80282.1| TPR-repeat-containing protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 1197 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 5/179 (2%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 +Y G + +I A+ + + E VY ++ + E + L Sbjct: 419 IYEGDKHLRQGDIKGAKVFYEKAKK--ASSEEPSVYNAFGRLYFISGDPKSSEENFKKAL 476 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 I A+ L + N +Y + +++ + P + + Y KE+ +A Sbjct: 477 SINKQNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDPSAAIVLGRTYEDKKEYEKA 536 Query: 208 ITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 L +K N + N A+L SLE +K + ++ + ++ KL + + Sbjct: 537 ENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNWISKAEKLTKDIPEIA 595 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 96/269 (35%), Gaps = 38/269 (14%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL A A + + + E + L+ + IA +Y A ++ E + Sbjct: 347 GLNMKALGEPAKALVYFTRARELDSAFAEPVTNLVFLLIAE--NRYKAARKEAESLKSES 404 Query: 151 ATREF------------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 ++ L R GD+ A+ + KA S + P V A + Y Sbjct: 405 EKKQIISFIDVSEQIYEGDKHL-----RQGDIKGAKVFYEKAKKASSEEPSVYNAFGRLY 459 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-KLCD 257 ++ + + + K A+ + R + +++ Y +E+L Sbjct: 460 FISGDPKSSEENFKKALSINK--QNIPALQGLIRLYSSQKNQNLVNQYTKELENLTGNDP 517 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL--------LS 304 + A+I ++ + + KAE + + + K P+ E +A +Y + Sbjct: 518 S---AAIVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNH 574 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSK 333 ++ + + +A +L + E E+ + + Sbjct: 575 DSALNWISKAEKLTKDIPEIAETRKTIQE 603 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 83/244 (34%), Gaps = 23/244 (9%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L ++ G+ A Y T+A ++ +V + + A K+ Sbjct: 347 GLNMKAL--GEPAKALVYFTRARELDSAFAEPVTNLVFLLIAENRYKAARKEAES-LKSE 403 Query: 219 KEWNRNRAILLIARSL----ENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQ 273 E + + + ++ + ++ +GD+ + ++ K + A + Sbjct: 404 SEKKQIISFIDVSEQIYEGDKHLRQGDIKGAKVFYEKAKKASSE-EPSVYNAFGRLYFIS 462 Query: 274 NKKRKAEVILEKIWKVNPH--PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + +E +K +N P + +Y+ ++N V + LE + + Sbjct: 463 GDPKSSEENFKKALSINKQNIPALQGLIRLYSSQKNQNLVNQYT--KELENLTGNDPSAA 520 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----EIFLLLAQI--EQANSHNTDKILYW 381 +++ + + ++A K P + +L +I E+ +N D L W Sbjct: 521 IVLGRTYEDKKEYEKAENVYKNLQKKFPNNEAVNFRLAMLYYKISLEENEKNNHDSALNW 580 Query: 382 TQSA 385 A Sbjct: 581 ISKA 584 >gi|115374950|ref|ZP_01462222.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1] gi|310819224|ref|YP_003951582.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115368077|gb|EAU67040.1| TPR domain protein [Stigmatella aurantiaca DW4/3-1] gi|309392296|gb|ADO69755.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 641 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 90/287 (31%), Gaps = 26/287 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVY---LLEVQ-----IALAERQYNIAHEKLEMMLQIP 150 N+ A + + V + E L L + + + A E L ++ Sbjct: 148 NLGEALQRAARVDDAIEAYREALKLDEGLTSARVNLGKALAEKGRLAEAKETLLKAIERA 207 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A Y+L R DL A KAL++ P + + + ++A+ Sbjct: 208 PLDAEARYNLGVLRMRENDLAGAMGEYRKALELQPRHASAHNNLGVAHDELGQHAQAVEA 267 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKS 269 + ++ A L GD + ++L L Sbjct: 268 FKKAIAAEPKY----AEAHFNLGLAYFRLGDNARATKSFEKALLLEPRRSSGPYTQLGHL 323 Query: 270 LISQNKKRKAEVILEKIWKV---------NPHPEIANIY-THLLSENTVGKLKRALRLEE 319 ++Q KK +A ++ H +A Y ++ V LK A E Sbjct: 324 YLAQGKKDRAVEAFKRALAASGDDGLKTTEAHQGLARAYLAQGRVDDAVATLKTA---VE 380 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + V + G +D A A+ ++ ++P E L LA+ Sbjct: 381 DFPKDVGARAAYGDALKAKGDLDGAIAQYEQSVALSPTPEARLALAE 427 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 80/270 (29%), Gaps = 22/270 (8%) Query: 133 ERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + + P R L + + + + A + A ++SP+ Sbjct: 88 SGDTEKARALLDTAIAAFPEEPTLRS--ERGLL--ARVLDETDVAITQYSVAAELSPNDA 143 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + + A AI + K + R L A+KG + + Sbjct: 144 ELRFNLGEALQRAARVDDAIEAYREALKLDEGLTSARVNL----GKALAEKGRLAEAKET 199 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLL 303 +++++ A + +N A K ++ P H + + L Sbjct: 200 LLKAIERAPLDAEARYNLGVLRMRENDLAGAMGEYRKALELQPRHASAHNNLGVAHDELG 259 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI--F 361 ++ + + E+ + +G +A A+ + PR+ + Sbjct: 260 QH--AQAVEAFKKAIAAEPKYAEAHFNLGLAYFRLGDNARATKSFEKALLLEPRRSSGPY 317 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391 L + A + + AL A D Sbjct: 318 TQLGHLYLAQGKKDRAVEA-FKRALAASGD 346 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 77/282 (27%), Gaps = 30/282 (10%) Query: 91 GLMSIAAHNIPLARKMHSYVS----QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 GL + A K ++ + L +L Q + + A E + Sbjct: 286 GLAYFRLGDNARATKSFEKALLLEPRRSSGPYTQLGHLYLAQ-----GKKDRAVEAFKRA 340 Query: 147 LQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L A L G ++ A A++ P A Sbjct: 341 LAASGDDGLKTTEAHQGLARAYLAQGRVDDAVATLKTAVEDFPKDVGARAAYGDALKAKG 400 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + AI Q + A+ + K + E LK + A Sbjct: 401 DLDGAIAQYEQSVALSPTPEARLALAEAYALMRVGTKSQPLYE-----ELLKEDASHRAA 455 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------AL 315 + A ++ + + E +L A+ +L+R Sbjct: 456 KLGLADLYLAMGRYVEVEALLTPREGEE-----ADTAALARLGIMHSRLQRPDKALPLLE 510 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ E + +++ + ++ L G D+A + PR Sbjct: 511 QVAEKDPAQLDARAELGQLYLRGGDKDKAVRVLGDVLATEPR 552 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 38/320 (11%), Positives = 85/320 (26%), Gaps = 47/320 (14%) Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH----NEYLVYLLEV--- 127 L + D+ +A L A+ + L + ++ + L Sbjct: 324 YLAQGKKDRAVEAFKRAL--AASGDDGLKTTEAHQGLARAYLAQGRVDDAVATLKTAVED 381 Query: 128 ------------QIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFES---CRIGD 169 A+ + A + E + P R E+ R+G Sbjct: 382 FPKDVGARAAYGDALKAKGDLDGAIAQYEQSVALSPTPEARLA-----LAEAYALMRVG- 435 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 +Q + L + Y+ + L +E L Sbjct: 436 -TKSQPLYEELLKEDASHRAAKLGLADLYLAMGRYVEVEALLT-----PREGEEADTAAL 489 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + ++ + + + + A + + K KA +L + Sbjct: 490 ARLGIMHSRLQRPDKALPLLEQVAEKDPAQLDARAELGQLYLRGGDKDKAVRVLGDVLAT 549 Query: 290 NP-HPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P HP + +Y T K +++ + E + ++ G +D+A Sbjct: 550 EPRHP-LGLLYLGQALYALGKTKQSEKSFQAAVQVDPNAAEPHNALGQLLEASGRLDEAK 608 Query: 346 AKAMLAMKI---APRKEIFL 362 + A+++ L Sbjct: 609 KEYAKAVELQSNHTDARAAL 628 >gi|22001550|sp|Q9WX71|BCSC4_ACEXY RecName: Full=Cellulose synthase 2 operon protein C; Flags: Precursor gi|4827170|dbj|BAA77596.1| bcsCII [Gluconacetobacter xylinus] Length = 1307 Score = 44.5 bits (104), Expect = 0.044, Method: Composition-based stats. Identities = 46/288 (15%), Positives = 91/288 (31%), Gaps = 28/288 (9%) Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L +I A +Y+ A L + + P + + R GD A R + + Sbjct: 427 LVARIVQAINAGRYDAARADLATLGRRPGYGLTVLSLQAALARRQGDTADAVRLYREVVR 486 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241 +P ++ V + + A L + ++ R A++L A++ GD Sbjct: 487 RAPRDAGALFSLGALDVQVGDATEAADILTRLQRLAPAMARRLEAMMLSAQA---DRAGD 543 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--- 298 + L + + A +L A+ +++ P A Sbjct: 544 DDGRIALLRRAQALDPDDPWVRLKLAHALDDAGDHAAAQAMMDA--LTAPRNASAQALQA 601 Query: 299 ---YTHLLSENT-----VGKLKRALRLEEINKESVESLVIVSK--IALEMGSIDQAHAKA 348 Y + + ++ R R ++ + + SLV++ + AL + A Sbjct: 602 GIIYAMGRHDTATAGALLERMPRTGRTPDM--DRLASLVVLDQRIAALNHAPVAGNAAVL 659 Query: 349 MLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSA--LHAMPDPL 393 LA + P + + A + A D L P P Sbjct: 660 ALADQPDPTGERGMRIAAALL-ARHAPQD-ARQALARGESLTQPPTPA 705 >gi|320352889|ref|YP_004194228.1| TPR repeat-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121391|gb|ADW16937.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfobulbus propionicus DSM 2032] Length = 210 Score = 44.2 bits (103), Expect = 0.044, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 11/199 (5%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E+ + DL++ K ++ P+ + Y A AI L + E Sbjct: 1 MTEAQKPADLSAVIGELEKIVEEKPNNVMARHHLGLIYRQAGRIDEAIAQLEKAI----E 56 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +I D+GD + ++L + + A + + + KA Sbjct: 57 LDNQSMESMINLGAIFFDRGDTDRALELNQQALAISPDMAEAHVNIGLIRQHRGEVDKAV 116 Query: 281 VILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIA 335 K +++ P++ + +L S E + A + + +S + ++ Sbjct: 117 ACYSKAVQID--PKLITAWINLTSAYTMLEQDDKAVDAARQAVTLEPDSAMARNNLAVAL 174 Query: 336 LEMGSIDQAHAKAMLAMKI 354 G ++ A ++ Sbjct: 175 YFKGDFAESQRNMEKAKEL 193 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 4/154 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A +LE +++ ++ +L GD + A +AL ISPD Sbjct: 41 AGRIDEAIAQLEKAIELDNQSMESMINLGAIFFDRGDTDRALELNQQALAISPDMAEAHV 100 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + E +A+ ++ + + A + + + ++ D + A ++ Sbjct: 101 NIGLIRQHRGEVDKAVACYSKAVQ--IDPKLITAWINLTSAYTMLEQDD--KAVDAARQA 156 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L +S MA A +L + +++ +EK Sbjct: 157 VTLEPDSAMARNNLAVALYFKGDFAESQRNMEKA 190 >gi|258591929|emb|CBE68234.1| protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 352 Score = 44.2 bits (103), Expect = 0.044, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 73/264 (27%), Gaps = 21/264 (7%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 E + A E L++ TR F VY E+ G KA A +V Sbjct: 42 QQEGRLAEAIEAFRSTLRLAPTRAF-VYVKLKEAYGRGRTGDQVGTELKAKADQDGADFV 100 Query: 191 TEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + ++ Y W+ AI L + + +++ + Sbjct: 101 SWNLLGVLYAKQGRWAEAIAALERTVQIQPA----DVDAWTNLGWLSSELKQSQKAREAF 156 Query: 250 IESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIWKVNP------HPEIANIYTHL 302 +L L A A + + KA P + Y Sbjct: 157 RRALALDSAYGRAHAGLAGLYAETEGEYDKAIEEYRLALAAEPGNSDYLYDMGWVYYRKG 216 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 ++++ + L A L + + L A + A++ P Sbjct: 217 MTDDALKILTEASTLS---PDDPAGRTKIGWARLRRKEYQVAIEEFERALRAQPEYTFAR 273 Query: 363 L-LAQIEQANSHNTDKI----LYW 381 LA+ QA ++ + W Sbjct: 274 FGLARALQAEGNDDAAVVEYKRAW 297 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 53/193 (27%), Gaps = 6/193 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G A + + I P + K+ +A + + R Sbjct: 111 KQGRWAEAIAALERTVQIQPADVDAWTNLGWLSSELKQSQKAREAFRRALALDSAYGRAH 170 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A L + + I Y A+ + + + + A IL + Sbjct: 171 AGLAGLYAETEGEYDKAIEEYRLALAAEPGNSDYL---YDMGWVYYRKGMTDDALKILTE 227 Query: 286 IWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++P + L + ++ R E + +++ G+ D Sbjct: 228 ASTLSPDDPAGRTKIGWARLRRKEYQVAIEEFERALRAQPEYTFARFGLARALQAEGNDD 287 Query: 343 QAHAKAMLAMKIA 355 A + A + A Sbjct: 288 AAVVEYKRAWREA 300 >gi|167031824|ref|YP_001667055.1| response regulator receiver protein [Pseudomonas putida GB-1] gi|166858312|gb|ABY96719.1| response regulator receiver protein [Pseudomonas putida GB-1] Length = 535 Score = 44.2 bits (103), Expect = 0.044, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 21/174 (12%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184 Q A A+ Y A + +M +Y E GD AQ +A+ +S Sbjct: 211 RGQNAQAQGVYEQALKAFPIMP--------GLYDGMAEVLVAQGDTRRAQNLLEEAVRLS 262 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--------ILLIARSLEN 236 P + + + + +++ A + A L+ + Sbjct: 263 PLSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFG 322 Query: 237 ADKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKI 286 D + E K + A + A SL A + E+ Sbjct: 323 LDARTRVEINTTLSEVAKENPEDQGLQVRARMMKAASLQQAGDPETAGKLTEQA 376 >gi|72382931|ref|YP_292286.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A] gi|72002781|gb|AAZ58583.1| TPR repeat [Prochlorococcus marinus str. NATL2A] Length = 681 Score = 44.2 bits (103), Expect = 0.044, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 21/218 (9%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A ++I A Y+L +G L A+ KA++I PD Sbjct: 174 GKLQEAELSYRKAIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIKPDFAEAHYN 233 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A + + ++ A D G + + +++ Sbjct: 234 LGNILNDLGKLQEAELSYRKAIEIKPDF----AEAHYNLGNILNDLGKLQEAELSYRKAI 289 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 ++ + A L K ++AE+ K ++ P+ A + +L + LK Sbjct: 290 EIKPDFAEAHYNLGNLLKELGKLQEAELSYRKAIEIK--PDFAEAHYNLGN-----LLKE 342 Query: 314 ALRLE----------EINKESVESLVIVSKIALEMGSI 341 +L+ EI + E+ +S + L G Sbjct: 343 LGKLQEAELSYRKAIEIKPDYAEAFWNLSLLELLQGDY 380 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 22/198 (11%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + Y KA++I PD + + A + + ++ A Sbjct: 177 QEAELSY-RKAIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIKPDF----AEAH 231 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 D G + + +++++ + A L K ++AE+ K ++ Sbjct: 232 YNLGNILNDLGKLQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAIEI 291 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEE----------INKESVESLVIVSKIALEMG 339 P+ A + +L + LK +L+E I + E+ + + E+G Sbjct: 292 K--PDFAEAHYNLGN-----LLKELGKLQEAELSYRKAIEIKPDFAEAHYNLGNLLKELG 344 Query: 340 SIDQAHAKAMLAMKIAPR 357 + +A A++I P Sbjct: 345 KLQEAELSYRKAIEIKPD 362 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 84/232 (36%), Gaps = 15/232 (6%) Query: 133 ERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A + + + R F+ Y + +G L A+ KA++I PD Sbjct: 71 QGNIPEAAKYYKNFINKGFKDERAFSNYGVIL--KSLGKLKEAEISTRKAIEIKPDFAKA 128 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + A + + ++ A D G + + Sbjct: 129 HYNLGNILNDLGKLKEAEISTRKAIEIKPDY----ADAYSNLGNILNDLGKLQEAELSYR 184 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVG 309 +++++ + A L K ++AE+ K ++ P+ A + +L + N +G Sbjct: 185 KAIEIKPDYAEAHYNLGNLLKELGKLQEAELSYRKAIEIK--PDFAEAHYNLGNILNDLG 242 Query: 310 KLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 KL+ A + EI + E+ + I ++G + +A A++I P Sbjct: 243 KLQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAIEIKPD 294 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 11/195 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G L A+ KA++I PD + + A + + ++ A Sbjct: 140 GKLKEAEISTRKAIEIKPDYADAYSNLGNILNDLGKLQEAELSYRKAIEIKPDY----AE 195 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + G + + +++++ + A L K ++AE+ K Sbjct: 196 AHYNLGNLLKELGKLQEAELSYRKAIEIKPDFAEAHYNLGNILNDLGKLQEAELSYRKAI 255 Query: 288 KVNPHPEIANIYTHLLSE-NTVGKLKRAL----RLEEINKESVESLVIVSKIALEMGSID 342 ++ P+ A + +L + N +GKL+ A + EI + E+ + + E+G + Sbjct: 256 EIK--PDFAEAHYNLGNILNDLGKLQEAELSYRKAIEIKPDFAEAHYNLGNLLKELGKLQ 313 Query: 343 QAHAKAMLAMKIAPR 357 +A A++I P Sbjct: 314 EAELSYRKAIEIKPD 328 >gi|154247338|ref|YP_001418296.1| TPR repeat-containing protein [Xanthobacter autotrophicus Py2] gi|154161423|gb|ABS68639.1| Tetratricopeptide TPR_2 repeat protein [Xanthobacter autotrophicus Py2] Length = 781 Score = 44.2 bits (103), Expect = 0.044, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 37/159 (23%) Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---H 292 +GD+ + LKL + ++ A ++R+A+ +LE+ K NP Sbjct: 611 LLRRGDVAGAEAQYRAGLKLQPDLPALAVNLADLYRLTGREREAQDVLERAIKANPDAAA 670 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESV---------------------ESLVIV 331 P A + + L R E+ ++ + + Sbjct: 671 PRHALGLALIRQKRYGEALNELKRAYELAPDNARYAYVYAVALQSLGRAQDSAAVTRDAL 730 Query: 332 SKI-------------ALEMGSIDQAHAKAMLAMKIAPR 357 +++ AL G +D+A + P Sbjct: 731 ARVPNDVDLLSLQLNEALRAGDVDRAREAVSKLTLLRPD 769 >gi|327539659|gb|EGF26267.1| TPR repeat-containing protein [Rhodopirellula baltica WH47] Length = 521 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 55/170 (32%), Gaps = 24/170 (14%) Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + + +E L + + +Y A +++++ + + A+ L Sbjct: 123 LPESQAKKEEAREIDLFALQDDAAIALQADNHDKAYQLARQAMRIAPSDPTSVFLMARVL 182 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV---------GKLKRALRLEEIN 321 +N+ +A +L+K+ P + +L + +R L + Sbjct: 183 GRRNRFPEAIQMLDKLALTTP-----DARLPVLGQTAQWMVQFGMWKDAEQRFRLLLQEA 237 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 E+ ++++ + G +A K L IE+ Sbjct: 238 PEATLVHRKLAELLVRQGKSSEAMEHLQTLCK----------LGDIEEIE 277 >gi|298529797|ref|ZP_07017200.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511233|gb|EFI35136.1| Tetratricopeptide TPR_2 repeat protein [Desulfonatronospira thiodismutans ASO3-1] Length = 568 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 4/124 (3%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLV-YLLEVQIALAERQYNIAHEKLE-MMLQI 149 + ++ P ++ + + + + + L+ A + A LE ++ Sbjct: 10 IAAVVLGCAPKTQQPETAKTGRELTPQAQVTYHYLKSLDYQAAGDHEKAALALEKALVLG 69 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P+ R L E R G+ A A I P P + + + Y++ + S A+ Sbjct: 70 PSVRL--YQDLAREYLRQGEKQKAVDILQDATGIYPRTPELYFQMAEFYLVKGDRSGAVK 127 Query: 210 FLNQ 213 L + Sbjct: 128 ALEK 131 >gi|70982436|ref|XP_746746.1| heat shock protein (Sti1) [Aspergillus fumigatus Af293] gi|66844370|gb|EAL84708.1| heat shock protein (Sti1), putative [Aspergillus fumigatus Af293] gi|159123013|gb|EDP48133.1| heat shock protein (Sti1), putative [Aspergillus fumigatus A1163] Length = 585 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 16/153 (10%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L T + + A+ A K I P Sbjct: 346 AYEKLGDFTQAIEYYHKSLTEHRTPDALTKLRN----------AEKAKVKAEKEAYIDPV 395 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + Q+ +W A+ + K A R R+ + Sbjct: 396 EAEKARELGQKKFQEADWPGAVEAFTEMTKRAPHDPRG----FSNRAAALIKLMAFPQAV 451 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 D E+++ I A I +++L++ + KA Sbjct: 452 QDCDEAIRRDPKFIRAYIRKSQALVAMKEYSKA 484 >gi|312882497|ref|ZP_07742238.1| tetratricopeptide repeat protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369897|gb|EFP97408.1| tetratricopeptide repeat protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 389 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 90/287 (31%), Gaps = 51/287 (17%) Query: 98 HNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + T + + + +A + A + + ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNIALQQLAKDYMASGLLDRAEKIFKQLVDEPDHREG 142 Query: 156 AVYSLYFESCRIGDLNSAQRYA-------TKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 A+ L + + + A Y+ K + + W A+ + + AI Sbjct: 143 ALQQLVSIYQQTREWDQAIHYSSMLVKMGRKMMRANISHFWCELAMQDK--ADGATTAAI 200 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + +++ RA + + ++ + + H LK + + Sbjct: 201 ASFKRAL--SEDSKCVRASISLG--KIYLEQENYDKTLHYLTMVLKQDSDFV-------- 248 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +L P IA Y L EN + R + S E Sbjct: 249 -----------SEVL---------PTIAECYHQLGQENELLNFLR-QCIANKVGVSAE-- 285 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLL----AQIEQA 370 ++++++ + D A + P + L+ A+ E+ Sbjct: 286 LMLAQLVSQHDGADAAQELLTRQLVKNPTMKGFYRLMDYHLAEAEEG 332 >gi|307580114|gb|ADN64083.1| HemY domain-containing protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 389 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 123/368 (33%), Gaps = 21/368 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRL-YRTSPFVILSILYFFLFAW 55 + L +FF++ L I S + P DV I G T P + +L L W Sbjct: 4 LRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDCITTVPQATILLLIIVLLLW 63 Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHT 115 L + + + Y +G+ L GL ++ LA ++ S+ Sbjct: 64 SLRSLLVLPI--------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTE 115 Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 L +++A ++ A+ + + T + S + + + Sbjct: 116 VSAIALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVL 173 Query: 176 YATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 A + + P ++Q + +S T Q+ + E+ R + Sbjct: 174 DALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIR 233 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHP 293 + D + + ++LK N + A L +N + E LE+ W N Sbjct: 234 QAKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN--- 290 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + +Y L + + RA ++ +S L+ + ++AL QA A+ Sbjct: 291 -LIRLYGFLPLKEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALRQQEYSQAETFLRRAID 349 Query: 354 IAPRKEIF 361 E + Sbjct: 350 KETNAETW 357 >gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii] gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii] Length = 687 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 17/100 (17%) Query: 133 ERQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRI-GDLNSAQRYATKALDISPDA 187 + A + + M P +CR+ DL+ + A K L++ P Sbjct: 465 AGKLQEAEKYISKMPSEPEIVTWASLLG-------ACRVHKDLDRGKLAARKLLELDPGN 517 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 + + Y +W A K + A R + + Sbjct: 518 SSASVVLSNIYSERGDWKNA-----AKLRRAMASRRVKKV 552 >gi|298480715|ref|ZP_06998911.1| TPR-repeat-containing protein [Bacteroides sp. D22] gi|298273149|gb|EFI14714.1| TPR-repeat-containing protein [Bacteroides sp. D22] Length = 272 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 9/169 (5%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q K + N A+L L G+ + +L ++ + Sbjct: 40 AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98 Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321 A + K +A +L++ K N + Y + L + ++ RL E++ Sbjct: 99 AAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 +S + ++ + + G +A + P +++ A +E+ Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALEILNKMLAATPEDATLYIARADVER 205 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 6/166 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L I + + + A+ +++ + +E + Y R D +A+ + Sbjct: 94 ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ P + + ++ A+ LN+ E A L IAR+ + Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMLAATPE----DATLYIARADVEREMK 208 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L S A + ++Q KK A+ EK Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254 >gi|53714051|ref|YP_100043.1| putative N-acetylglucosamine transferase [Bacteroides fragilis YCH46] gi|52216916|dbj|BAD49509.1| putative N-acetylglucosamine transferase [Bacteroides fragilis YCH46] Length = 482 Score = 44.2 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 18/205 (8%) Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A K +D +P P WV A + K++ +AI + +E+ A + Sbjct: 192 EQAIVVFNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAIESCDFAIAADEEFG--EAHI 247 Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNS----IMASICAAKSLISQNKK-RKAEVI 282 + A SL + + + I Y A++ L I + ++ N+ A Sbjct: 248 IKAHSLFHLENIEGAIVEYRKALKYKTLSPEFTYMFIGLAYTQQENWAEANESYSMALRA 307 Query: 283 LEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEE-INKESVESLVIVSKIALE 337 +E+ P +++IY++ + + R RL + + + E ++ +I +E Sbjct: 308 IEEN-GNGSSPLLSDIYSNKALCASRQGDSEEAHRLCRLAKELAPQDAEPYLLEGRIYME 366 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362 + D A A+ LA++ AP + ++ Sbjct: 367 EDNFDLARAEWALALRYAPEADTWM 391 >gi|295669658|ref|XP_002795377.1| pre-mRNA-splicing factor CLF1 [Paracoccidioides brasiliensis Pb01] gi|226285311|gb|EEH40877.1| pre-mRNA-splicing factor CLF1 [Paracoccidioides brasiliensis Pb01] Length = 677 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 75/240 (31%), Gaps = 26/240 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185 A + + ++P + A++ Y + GD +Y + + SP Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKESP 318 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239 + V+ + + R + R L I +L E + Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378 Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 DM + E LKL + A+ I Q + A L P ++ Sbjct: 379 KDMERARQIYQECLKLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y L E + K + E + + ++ + +++ + ID+A A L + Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497 >gi|167625825|ref|YP_001676119.1| HemY domain-containing protein [Shewanella halifaxensis HAW-EB4] gi|167355847|gb|ABZ78460.1| HemY domain protein [Shewanella halifaxensis HAW-EB4] Length = 389 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 68/418 (16%), Positives = 130/418 (31%), Gaps = 57/418 (13%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL--- 57 M+R + Y +I L +C + + + G+ TS + L F L Sbjct: 1 MVRALVYLIIILLGLCISPFLVGSKGYLYLAIGDYQIETSIVFAIIALIIFYSLLQLVEF 60 Query: 58 -LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARK-MHSYVSQQHT 115 + LS + K G +++A + P A K M + Sbjct: 61 VVVWFLNMVLSSRYLPERWRKKAARKHTLL----GALALAEEDWPAAEKAMAKGAEKGEI 116 Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKL----------EMMLQIPATREFAVYSLYFESC 165 L + A + A ++ E + TR Sbjct: 117 ---PALNLFAAARAAHHQNN-IQARDEYLAKAQLEPQAEKAARTTRTRYL---------L 163 Query: 166 RIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKE 220 + GDL +A+ + ++P P + A + Y ++W L KK+ + Sbjct: 164 QQGDLVAAR---EELDKLNPTSKSKLPILKLA-IDLYQAQQDWQSLKLLLPIVNKKHVLD 219 Query: 221 WNRNRAI-----LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + A+ + A++ ++ +H + I A L + Sbjct: 220 DDAFSALSLKTNTALLSQAAKANEQELEKCWHWLTRGERKQAEYI---ALYAIGLSRFER 276 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 K +A +L K K +P + N + +L+ V K+ L LE + SV+ + ++K+ Sbjct: 277 KDEAVKMLLKQVKASPSAPVLNALSQVLTPADVEAKKQLLALEPQYENSVDYQICLAKLY 336 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 + QA A + LA ++ AL + Sbjct: 337 QQNHDYHQAKIWWQKACYLQDDINSLHALADAQEHLGE--------LNRALQTRRNAA 386 >gi|86160228|ref|YP_467013.1| hypothetical protein Adeh_3810 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776739|gb|ABC83576.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 969 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 6/212 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY 158 AR T L ++ + AE + A + + + P E A+ Sbjct: 762 GRAARGRALLEKLAATRSPPPLAHVALGRALEAEGRAADAEKAYRDAVTRDPRAPEPAL- 820 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L R G A + KA+ + P P A+ + E S A L+ Sbjct: 821 ALGDLLLRRGRAGDALPFLEKAVALDPADPEARRALGAARLAGGEASAARAELDAVLLAR 880 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 A L S + + A L + + A++ ++ + Sbjct: 881 P----KDAAALRLLSAAWLAEAQPAEARRAAERGLAVAPRDPALLLAGARAALADGDRAV 936 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 A + E+ K E A L + T + Sbjct: 937 ARALAERALKAGARGEDAAEARRLAATQTAKR 968 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 54/200 (27%), Gaps = 8/200 (4%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLK 254 +++ A L + ++ R A + +L + +G + + + Sbjct: 723 ARYRLGQFAAARAELERTARDG----RMPAEAAVWYALTDVAQGRAARGRALLEKLAATR 778 Query: 255 LCDNSIMASICAA-KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 ++ A ++ KA P P +A L L Sbjct: 779 SPPPLAHVALGRALEAEGRAADAEKAYRDAVTRDPRAPEPALALGDLLLRRGRAGDALPF 838 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 + ++ E+ + L G A A+ + P+ L L Sbjct: 839 LEKAVALDPADPEARRALGAARLAGGEASAARAELDAVLLARPKDAAALRLLSAAWLAEA 898 Query: 374 NTDKILYWTQSALH-AMPDP 392 + + L A DP Sbjct: 899 QPAEARRAAERGLAVAPRDP 918 >gi|26987504|ref|NP_742929.1| response regulator/TPR domain-containing protein [Pseudomonas putida KT2440] gi|148546041|ref|YP_001266143.1| response regulator receiver protein [Pseudomonas putida F1] gi|24982171|gb|AAN66393.1|AE016267_2 response regulator/TPR domain protein [Pseudomonas putida KT2440] gi|148510099|gb|ABQ76959.1| response regulator receiver protein [Pseudomonas putida F1] Length = 535 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 21/174 (12%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184 Q A A+ Y A + +M +Y E GD AQ +A+ +S Sbjct: 211 RGQNAQAQGVYEQALKAFPIMP--------GLYDGMAEVLVAQGDTRRAQNLLEEAVRLS 262 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--------ILLIARSLEN 236 P + + + + +++ A + A L+ + Sbjct: 263 PLSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFG 322 Query: 237 ADKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKI 286 D + E K + A + A SL A + E+ Sbjct: 323 LDARTRVEINTTLSEVAKENPEDQGLQVRARMMKAASLQQAGDPETAGKLTEQA 376 >gi|21230633|ref|NP_636550.1| histidine kinase/response regulator hybrid protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769371|ref|YP_244133.1| histidine kinase/response regulator hybrid protein [Xanthomonas campestris pv. campestris str. 8004] gi|188992557|ref|YP_001904567.1| Putative two-component system sensor histidine kinase-response regulator hybridprotein [Xanthomonas campestris pv. campestris str. B100] gi|21112216|gb|AAM40474.1| histidine kinase/response regulator hybrid protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574703|gb|AAY50113.1| histidine kinase/response regulator hybrid protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734317|emb|CAP52527.1| Putative two-component system sensor histidine kinase-response regulator hybridprotein [Xanthomonas campestris pv. campestris] Length = 646 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 18/203 (8%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P T V + S GD+ + A I P P V A ++ + A+ Sbjct: 70 RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLVATLRTLLRARN 129 Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ + + A L + + A+ +AI L Sbjct: 130 AEEALRLSEARFREIFEHIGAPIAVVDAQLHTQEANAAFQRLIGSATPCEAINVPGLDQC 189 Query: 259 SIMASICAAKSLISQNKKRKAEVIL------EKIWKVNPH--PEIANIYTHLLSENTVGK 310 + + ++ AA L + + IL E W+V+P+ P++ ++ + T + Sbjct: 190 ATVQALTAA--LGRRERWSGTLSILRDGAVRETEWRVSPYREPDLGLLFVE---DVTEQR 244 Query: 311 LKRALRLEEINKESVESLVIVSK 333 L+ + +E++ + E +++ Sbjct: 245 LREREQRQELDTATSELAHQIAE 267 >gi|295131954|ref|YP_003582630.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87] gi|294979969|gb|ADF50434.1| TPR repeat-containing protein [Zunongwangia profunda SM-A87] Length = 445 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 20/229 (8%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A+E L+ L I Y + + + A+ Y KALD+ P+ + Sbjct: 46 NYEKANEALQKCLAINDQSPVIYYEIAKNHYSLEEFEQAKAYFQKALDLKPNDENILREY 105 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR-----SLENADKGDMIASYHDA 249 + + + ++ AI L + K ++ + A L I +L D D+ ++ Sbjct: 106 YENEIASVDYESAIQILQKLIKIDTKYREDLADLYILSDRYDNALSLIDSLDIQYGENEY 165 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306 L+ + N LEK K +P E + IY Sbjct: 166 RTHLRR------------QIYARTNNTDAQIANLEKAIKDDPKEEENYLNLIYVLSDEGM 213 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 K A +L +++ S + + + K L ++A + K Sbjct: 214 EEEAFKTAQQLLQVSPGSSLAHLALYKFYLNKDQPEEAMQSMQMVFKSE 262 >gi|258574475|ref|XP_002541419.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237901685|gb|EEP76086.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 920 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 92/265 (34%), Gaps = 37/265 (13%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R KA + +P+ + A V+ A++ +A L ++ A Sbjct: 595 LAKEKWQAGEIDNARRVLAKAFNQNPNNEDIWLAAVKLEADAQQTDQARELLATARREAG 654 Query: 220 EWNRNRAILLIARSLENADKG-----------------------------DMIASYHDAI 250 + R L N + + Sbjct: 655 TDRVWIKSVAFERQLGNTEAALDLVNQALQLYPKADKLWMMKGQIYETEKKYPQAREAYG 714 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSENTVG 309 + C S+ + A++ K+ IL++ P+ A ++T + E Sbjct: 715 TGTRACPKSVPLWLLASRLEEKLGVVVKSRSILDRARLAV--PKNAELWTESVRIERRAN 772 Query: 310 KLKRALRLEEIN-KESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A + +E S ++ S+ LE + + + K+ +FL +A+ Sbjct: 773 NIGQAKIIMAKALQEVPTSGLLWSESIWHLEPRTHRKPRS-LEAIKKVDNDPILFLTVAR 831 Query: 367 IEQANSHNTDKILYWTQSALHAMPD 391 I +K + W + A+ A D Sbjct: 832 IFWGERR-LEKAMTWFEKAIVADSD 855 >gi|222087125|ref|YP_002545660.1| O-linked GlcNAc transferase protein [Agrobacterium radiobacter K84] gi|221724573|gb|ACM27729.1| O-linked GlcNAc transferase protein [Agrobacterium radiobacter K84] Length = 291 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 11/129 (8%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y+ A L R + + + D A +KA+ +SP++P + Sbjct: 163 NDYSKAIS-----LGTTDGRAYNGRGVILQKRNQQD--KAIDDFSKAISLSPNSPEPYNS 215 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Y+ K+ A N +A + + A ++ +GD + ++ Sbjct: 216 RGISYLAQKDEDNAFADFN----HAIDLDNKVAESWANQAFVYEQRGDKAKARRSYQHAV 271 Query: 254 KLCDNSIMA 262 L A Sbjct: 272 NLDPTYQPA 280 >gi|186517170|ref|NP_195462.3| SRFR1 (SUPPRESSOR OF RPS4-RLD 1); protein complex scaffold [Arabidopsis thaliana] gi|332661397|gb|AEE86797.1| suppressor of RPS4-RLD 1 / tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] Length = 1052 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 17/211 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146 L G+ + N A + V ++ + E L+ +R+ A + + Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 358 Query: 147 LQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 PA E + G+ A TKAL P++P V +K+++ Sbjct: 359 QSNPAASEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 416 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ L+ K K+ L +A + G+ + ++S++L N + A + Sbjct: 417 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 472 Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289 A+ KA +E+ +WK Sbjct: 473 LAQFYQELADHCKALECIEQVLQVDNRVWKA 503 >gi|56476196|ref|YP_157785.1| hypothetical protein ebA1403 [Aromatoleum aromaticum EbN1] gi|56312239|emb|CAI06884.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 573 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 95/321 (29%), Gaps = 42/321 (13%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEY-------LVYLLEVQIALAERQYNIAHEKLEM 145 ++ A + R + + N V LL Q+ ++ A LE Sbjct: 259 VAYARGLVSARRFEAARDEFRKLLDNAPNDRDLMYAVGLLSAQL----DDFDAAAPLLEQ 314 Query: 146 MLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L + +L + R D A R+ ++ + + Sbjct: 315 ALNAGHPEADGIRLNLGQIAERRDDSEGALRWYRT-VEHGRHHTDAQIRIAALLAQQGKL 373 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD---NSIM 261 +A L + R R +A + +G + L+ + + Sbjct: 374 QQAREHLQSVQAGPDTIKRLR----LAEAQLLRAEGREAEALELIDGELRKAPEDPDLLY 429 Query: 262 ASICAAKSLIS----QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRA 314 S A+ L + + RK + P+ A+ Y + L + + L A Sbjct: 430 ESSMLAEQLGQLDVMEGRLRKLISL---------QPDHAHAY-NALGYSLADRGLRLDEA 479 Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 L E+ L + + G A A A + P EI L ++ + Sbjct: 480 EALIGRALELTPGDPFILDSMGWVNFRQGDAATALAHLEKAYSLHPDPEIAAHLGEVLWS 539 Query: 371 NSHNTDKILYWTQSALHAMPD 391 + D W + AL A PD Sbjct: 540 LNRQADATRIWNE-ALQAHPD 559 >gi|148264628|ref|YP_001231334.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146398128|gb|ABQ26761.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 729 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 83/250 (33%), Gaps = 31/250 (12%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPA------TREFAVYSLYFESCRIGDLNSAQRY 176 + L+ IAL + A + ++ R ++L E + D Sbjct: 376 HFLKGSIALLKNDGVNAVAEFRTVVAEQPQSIQGYLRLAEAHALNREMNLMNDTL----- 430 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRA--ILLIAR 232 AL + P++ V A+ + Y + K++ +A L + +K R+ + + AR Sbjct: 431 -QNALKVDPESSDVQRAMARSYAMQKDFRKAEEQLRKLVRKYPGDMEARSDLGDVFVAAR 489 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 A+ +A + + + + K + LEK ++NP Sbjct: 490 DFGRAESEYADLKRK--------VPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPR 541 Query: 293 -----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 + Y L + + N + + ++ ++ ++ +A Sbjct: 542 ATSFLSSLMQAYLRLNKGDAA--VALLDARIRSNPKDAVAYTLLGQLYGAQKNLPKADQA 599 Query: 348 AMLAMKIAPR 357 A+++ P Sbjct: 600 YSKALELKPD 609 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 57/159 (35%), Gaps = 13/159 (8%) Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP---- 293 +KGD + + + ++++ A + +N + A K ++NPH Sbjct: 40 EKGDYVKANLEFRNAVQIDPKFADAYYMLGLVELKRNNLKGAYGGFNKAIELNPHNLDAQ 99 Query: 294 -EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++ ++ + + +++A + + N + ++ + +D+A + Sbjct: 100 YQMGKLFLAVREADKA--MEKAELILKENPRHEDGQLLKGAALVAGKELDKARLYLEEVI 157 Query: 353 K---IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 P FLLLA I + + + L A Sbjct: 158 GGGVRKPDA--FLLLASIAR-LKGDMSGTETALRKGLEA 193 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 7/136 (5%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146 L + + + +A ++ + + + Y L Q+ A++ A + + + Sbjct: 549 LMQAYLRLNKGDAAVAL----LDARIRSNPKDAVAYTLLGQLYGAQKNLPKADQAYSKAL 604 Query: 147 LQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 P T + L E DL+ A A KA I PD V + + Y + Sbjct: 605 ELKPDLWTAANDLSFLLCEYGTPKDLDRALSLAQKAQAIRPDDATVLDTLGWIYYRKGDN 664 Query: 205 SRAITFLNQKKKNAKE 220 +A L + K+ Sbjct: 665 RKAEEHLRKALAKGKD 680 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 60/196 (30%), Gaps = 10/196 (5%) Query: 98 HNIPLARKMHSYVSQQ-----HTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPA 151 ++ +A + + L Y+ ++ + E ++ A E + + P Sbjct: 482 GDVFVAARDFGRAESEYADLKRKVPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPR 541 Query: 152 -TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 T + SL R+ ++A + +P + Q Y K +A Sbjct: 542 ATSFLS--SLMQAYLRLNKGDAAVALLDARIRSNPKDAVAYTLLGQLYGAQKNLPKADQA 599 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 ++ + + A L E D+ + A ++ + + Sbjct: 600 YSKALELKPDLWTA-ANDLSFLLCEYGTPKDLDRALSLAQKAQAIRPDDATVLDTLGWIY 658 Query: 271 ISQNKKRKAEVILEKI 286 + RKAE L K Sbjct: 659 YRKGDNRKAEEHLRKA 674 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 10/227 (4%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A R + A + + + A L G KAL I+P A Sbjct: 487 AARDFGRAESEYADLKRKVPQIPLAYVKLGELYMLEGKWARGAAELEKALQINPRATSFL 546 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +++Q Y+ + A+ L+ + ++ A+ + ++ + + Sbjct: 547 SSLMQAYLRLNKGDAAVALLDARIRSNP----KDAVAYTLLGQLYGAQKNLPKADQAYSK 602 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI-----YTHLLSE 305 +L+L + A+ + L + + L K P+ A + + + Sbjct: 603 ALELKPDLWTAANDLSFLLCEYGTPKDLDRALSLAQKAQAIRPDDATVLDTLGWIYYRKG 662 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + + K++ + ++ + G D A A+ Sbjct: 663 DNRKAEEHLRKALAKGKDNPVMNYHLGMVSQKSGKRDLAKESLDRAL 709 >gi|114320843|ref|YP_742526.1| TPR repeat-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227237|gb|ABI57036.1| Tetratricopeptide TPR_2 repeat protein [Alkalilimnicola ehrlichii MLHE-1] Length = 295 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 21/135 (15%) Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKR-----ALR 316 + ++L + K +A + HPE+ Y LL+ + G+L+ R Sbjct: 175 VLLGRTLTALGKTEQALESYRAALRHGQDNHPELLARYADLLAGSRDGRLRGDPERLVRR 234 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTD 376 +I+ + +L + ALE G A + + P A S + Sbjct: 235 ALDIDPDHRLALWLAGSAALERGDAAVARRHWERLLALLP-------------AESDDAG 281 Query: 377 KILYWTQSALHAMPD 391 KI AL Sbjct: 282 KIREKL-RALDGPRG 295 >gi|302816471|ref|XP_002989914.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii] gi|300142225|gb|EFJ08927.1| hypothetical protein SELMODRAFT_447866 [Selaginella moellendorffii] Length = 899 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 35/189 (18%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + +A + P + + E+ A L + ++ A + Sbjct: 348 ACEHYREAAILHPPHYRALKLLGSGLYGVGEYRAAEKALGEAIFLKSDY--ADAHCDLGS 405 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 L GD + + +++ + + + A L + ++A Sbjct: 406 VLHAL--GDDERAIVEFQKAIDIKPDHMDALYNLGGLLRDTGRFQRA------------- 450 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 A +Y+ +L +N ++ + + L G ++A A Sbjct: 451 ---AEVYSRVL---------------SLNPSHWQAQLNRAVSLLGAGDTEEARKALKEAF 492 Query: 353 KIAPRKEIF 361 K+ R E++ Sbjct: 493 KMTNRVELY 501 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 94/302 (31%), Gaps = 35/302 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + R+ + + + + + L L Q A A R + A + M Sbjct: 212 AGGDEVVRRTMHDLGTESSVYQKALGDL--RQKADASRTQDEAFDAHMAM---------- 259 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLN 212 SL+ A +A ++ P + +++ A Sbjct: 260 GRSLFDHKF----YEEALICFKRATELRPTDVRPHFRTGNTLYSL----EKFLEAREAYE 311 Query: 213 QKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 A N L + + +G ++ + E+ L A Sbjct: 312 LALDAANTGNPQWTNLVPQIHVNLGVALEGEGMLLNACEHYREAAILHPPHYRALKLLGS 371 Query: 269 SLISQNKKRKAEVIL-EKIWK----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 L + R AE L E I+ + H ++ ++ H L ++ ++ + +I + Sbjct: 372 GLYGVGEYRAAEKALGEAIFLKSDYADAHCDLGSV-LHALGDDERAIVE-FQKAIDIKPD 429 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 +++L + + + G +A + + P L + + +T++ + Sbjct: 430 HMDALYNLGGLLRDTGRFQRAAEVYSRVLSLNPSHWQAQLNRAVSLLGAGDTEEARKALK 489 Query: 384 SA 385 A Sbjct: 490 EA 491 >gi|298242866|ref|ZP_06966673.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|298251366|ref|ZP_06975169.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|298251990|ref|ZP_06975793.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297545958|gb|EFH79826.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297546582|gb|EFH80450.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297555920|gb|EFH89784.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 411 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 16/168 (9%) Query: 135 QYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +Y A E + +L++ FA ++ G A + + ++P+ + Sbjct: 238 RYEEALEAFKQVLRLQPDNLFAHRKKGQALQAL--GRYEEALIIFGQLIHLTPEDLSLFY 295 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + A+ + A+ +Q + + A+L + L G + + ++ Sbjct: 296 EKGALFFEAERYCEALAVFDQIFRRNPD----DAMLHYYQGLALLRLGRIQEALGAFEQT 351 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKA----EVIL----EKIWKVNPH 292 L+L + + A I K L+ + ++A E +L + W V H Sbjct: 352 LQLDPDYLPAYIAQGKLLVQSGRSQEALHACEQVLRLNPQTAWAVQTH 399 >gi|171910450|ref|ZP_02925920.1| TPR repeat [Verrucomicrobium spinosum DSM 4136] Length = 264 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 54/157 (34%), Gaps = 6/157 (3%) Query: 119 EYLVYLLE--VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L L A A + + A + + ML++ +L + G L AQ Sbjct: 79 PPLTTGLSELASQAFARKDWKSARKYYQQMLEVDPLNALTHANLGAVEQQAGRLKDAQSL 138 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 ++A+ I+P A+ + A++ L + A ++ Sbjct: 139 FSRAVAINPSLQQTWVALGLVSYENGDLYYALSALGRAIHEDPA----DARAHNYMAIVL 194 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 G + A+ + + +++L + A+ A + + Sbjct: 195 KKLGWLDAAELELLRAIELNPDYANANFNLALMYLER 231 >gi|154281465|ref|XP_001541545.1| pre-mRNA splicing factor prp1 [Ajellomyces capsulatus NAm1] gi|150411724|gb|EDN07112.1| pre-mRNA splicing factor prp1 [Ajellomyces capsulatus NAm1] Length = 918 Score = 44.2 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 29/161 (18%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R +A + +P+ + A V+ A + A L+ ++ A Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADANQTEHARELLSTARREAG 675 Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250 + R L N ++ + Sbjct: 676 TDRVWIKSVAFERQLGNTEQALDLANQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + C S+ + A++ KA IL++ P Sbjct: 736 TGTRACPRSVPLWLLASRLEEKAGVVVKARSILDRARLAVP 776 >gi|262305031|gb|ACY45108.1| acetylglucosaminyl-transferase [Prokoenenia wheeleri] Length = 290 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 +P A + ++ + H + L L I + A + + L++ A Sbjct: 34 GLVPEAEECYNTALRLCPTHADSLNNL--ANIKREQGFIEEAMKLYQKALEVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ ISP + + A+ + + Sbjct: 92 SNLASVLQQQGRLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDVQGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G + + +LKL + A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGSIPEAIASYRTALKLKPDFPDAYCNLAHCL 200 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 24/216 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L++ T ++ +L G + A + KAL++ P+ Sbjct: 27 ANALKEKGLVPEAEECYNTALRLCPTHADSLNNLANIKREQGFIEEAMKLYQKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A+ + + + + A + GD+ + Sbjct: 87 FAAAHSNLASVLQQQGRLNDALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDVQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 ++++ A A +A K+ P+ + Y +L Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIASYRTALKLK--PDFPDAYCNLAHCL 200 Query: 305 ------ENTVGKLKRA----------LRLEEINKES 324 + ++K+ RL ++ Sbjct: 201 QIVCDWTDYDQRMKKLVTIVMDQLDKNRLPSVHPHH 236 >gi|240280843|gb|EER44347.1| pre-mRNA-splicing factor CLF1 [Ajellomyces capsulatus H143] Length = 648 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185 A + + ++P ++ A++ Y + GD +Y + + +P Sbjct: 232 ERARAIYKYALDRLPRSKSIALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQVKENP 290 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239 + V+ + + R + R L I +L E + Sbjct: 291 KNYDIWFDFVRLEESSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELET 350 Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 DM + E +KL + A+ I Q + A L P ++ Sbjct: 351 KDMDRARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQTARKTLGHAIGACPKDKL 410 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y + E + K + + N + ++ + +++ + ID+A A L + Sbjct: 411 FKGYIDIERQLFEFVRCR-KLFEKQIKWNPANCQAWIKFAELERGLDDIDRARAIYELGI 469 >gi|255690251|ref|ZP_05413926.1| TPR-repeat-containing protein [Bacteroides finegoldii DSM 17565] gi|260624271|gb|EEX47142.1| TPR-repeat-containing protein [Bacteroides finegoldii DSM 17565] Length = 272 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 9/175 (5%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L + K + N A+L L G+ + +L ++ + Sbjct: 40 AEELLLRALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98 Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321 A + K +A +L+ K N + Y + L + ++ RL E++ Sbjct: 99 AAIYMEMGKTDRAYTDYCQVLDGD-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNT 375 +S + ++ + + G +A A + P +++ A +E+ H Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALAILNKMIVEYPEDATLYIARADVERDMKHED 211 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 6/166 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L I + + + A+ +++ +E + Y R D +A+ + Sbjct: 94 ILLDRAAIYMEMGKTDRAYTDYCQVLDGDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ P + + ++ A+ LN+ E A L IAR+ D Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALAILNKMIVEYPE----DATLYIARADVERDMK 208 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L +S A + + Q KK A+ EK Sbjct: 209 HEDLALVDLEEAIRLDASSADAYLLRGNIYLVQKKKALAKSDFEKA 254 >gi|254443715|ref|ZP_05057191.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198258023|gb|EDY82331.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 480 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 61/206 (29%), Gaps = 34/206 (16%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + A + LE + I + + L +G++ SA+ Y +A I P Sbjct: 264 AASAADPSNNHARARQLLERAVTIAPNDDLPIRLLGNLMSDLGEMTSARTYLERAAQIDP 323 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---------------------- 223 P +V+ + A L+ N E Sbjct: 324 KEPDNWSYLVRVLKAIGDMPAANRALDAGLANCPEAPVLHLEKGRRYAAAGRFEAAAASF 383 Query: 224 --------NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + +L + + E +K+ N +A + A+ IS Sbjct: 384 AFARRNLPEDSTASMELALVYFKQERLEEGVVALHEVVKIDPNHPVAVVLLARYAISNGD 443 Query: 276 KRKAEVILEKIWKVNP---HPEIANI 298 A +++ + P ++A + Sbjct: 444 AADAANWIKRA-RKQPKIAARDLAQV 468 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 84/280 (30%), Gaps = 29/280 (10%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 L R++ + + N ++ A + A E +++I Y L Sbjct: 53 ELGRRLEAAEGSARSLWNSRGGLSELARLYQANGFLSQARECQRSLVEIDPQNPTWPYFL 112 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + GDL +A K + ++PD + + + + + A T + E Sbjct: 113 GNIAGGYGDLQTALPLLQKTIQLAPDYLPARVRLGDSLMKSNQNAEAATVYREVLSRDPE 172 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + S + G+ A+ ++ ++ A + Sbjct: 173 ----NGYAITGLSRTELNGGNPDAARQRLLQFVQRQPQFAPAWGLLISIEERLGNE---T 225 Query: 281 VILEKIWKVN--------PHP---EI-ANIY------THLLSENTVGKLKRALRL----E 318 + E + P P ++ A Y + + RA +L Sbjct: 226 AVAEYKLRAQDAGRQREMPDPWIDDLMAECYDPYRLSVAASAADPSNNHARARQLLERAV 285 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 I + ++ + ++G + A A +I P++ Sbjct: 286 TIAPNDDLPIRLLGNLMSDLGEMTSARTYLERAAQIDPKE 325 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 39/164 (23%) Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 GD+ + ++++L + + A + SL+ N+ +A A +Y Sbjct: 120 GDLQTALPLLQKTIQLAPDYLPARVRLGDSLMKSNQNAEA----------------ATVY 163 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-K 358 +LS + E+ ++ +S+ L G+ D A + + ++ P+ Sbjct: 164 REVLSRD---------------PENGYAITGLSRTELNGGNPDAARQRLLQFVQRQPQFA 208 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMP-----DPLWISD 397 + LL IE+ + T Y A A DP WI D Sbjct: 209 PAWGLLISIEERLGNETAVAEYKL-RAQDAGRQREMPDP-WIDD 250 >gi|186683043|ref|YP_001866239.1| hypothetical protein Npun_F2761 [Nostoc punctiforme PCC 73102] gi|186465495|gb|ACC81296.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 327 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 43/144 (29%), Gaps = 14/144 (9%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD- 182 +L Q A + +L A+ + +A + L Sbjct: 156 VLLAQAKQQIGDREGAAQAYRAILSTKPGDLKALQGMVALLISQQRPEAAIGLLQETLSK 215 Query: 183 ------ISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 I P + + ++ + K +++A + +Q K + R ++A++ Sbjct: 216 AAQVNTIQPGSVDTVAVQVLLGSVHASQKRYAQASSVYDQAIKRDPKDFRP----VVAKA 271 Query: 234 LENADKGDMIASYHDAIESLKLCD 257 + +G + + L Sbjct: 272 MLLKQQGKDADAKPLFDSAAALAP 295 >gi|241176305|ref|XP_002399529.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis] gi|215495156|gb|EEC04797.1| tpr repeat nuclear phosphoprotein, putative [Ixodes scapularis] Length = 1095 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 85/286 (29%), Gaps = 22/286 (7%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + + + V L + A E L Sbjct: 166 LGKACIAFNKKDYRGALAFYKKAL-RTNPNCPAEVRLGMGHCFYRLGKQEKARAAFERAL 224 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQ---RYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + A+ L + + + + ++A + P P V + + K++ Sbjct: 225 ALDPQCVGALAGLAVLQLNLKGPEATRTGVQMLSRAYAVDPSCPVVLNQLANHFFFKKDY 284 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-SIMAS 263 + L + E RA + + D ++ ++ + ++ Sbjct: 285 -GKVQHLALHAFHNTENEAMRAESCYQLARSFHVQEDFDQAFQYYYQATQFAPTSFVLPH 343 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK-RALRL 317 + I + A EK+ K P + ++Y + S++ + K ++ Sbjct: 344 FGLGQMYIFRGDVDNAAQCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDQAKTHLKKV 403 Query: 318 EEINKESVESLVIVS--------KIALEMGSIDQAHAKAMLAMKIA 355 E E VE+ + ++ + AL A +K Sbjct: 404 TEQFPEDVEAWIELAQILEQSDVQAALSA--YGTATRLLQDKVKAD 447 >gi|134079877|emb|CAK41009.1| unnamed protein product [Aspergillus niger] Length = 629 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 12/146 (8%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A E L T + + + D A K + P Sbjct: 346 GDLTQAIEYYHKSLTEHRTPDVLTK--LRNAEKAKDK------AEKEAYVDPAEAEKARE 397 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Q+ +W A+ + K A + R R+ + D E+ Sbjct: 398 LGQKKFQEADWPGAVEAFTEMVKRAPQDPRG----FSNRAAALIKLMAFPQAVQDCDEAT 453 Query: 254 KLCDNSIMASICAAKSLISQNKKRKA 279 K I A + A++LI+ + KA Sbjct: 454 KRDPKFIRAYMRKAQALIAMKEYNKA 479 >gi|60682246|ref|YP_212390.1| hypothetical protein BF2774 [Bacteroides fragilis NCTC 9343] gi|253564693|ref|ZP_04842149.1| TPR domain-containing protein [Bacteroides sp. 3_2_5] gi|265766330|ref|ZP_06094371.1| TPR domain-containing protein [Bacteroides sp. 2_1_16] gi|60493680|emb|CAH08469.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] gi|251946158|gb|EES86535.1| TPR domain-containing protein [Bacteroides sp. 3_2_5] gi|263253998|gb|EEZ25463.1| TPR domain-containing protein [Bacteroides sp. 2_1_16] Length = 478 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 18/205 (8%) Query: 171 NSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A K +D +P P WV A + K++ +AI + +E+ A + Sbjct: 188 EQAIVVFNKLIDKNPYNPAYWVGLA--KCQFATKDFDKAIESCDFAIAADEEFG--EAHI 243 Query: 229 LIARSLENADKGD-MIASYHDAIESLKLCDNS----IMASICAAKSLISQNKK-RKAEVI 282 + A SL + + + I Y A++ L I + ++ N+ A Sbjct: 244 IKAHSLFHLENIEGAIVEYRKALKYKTLSPEFTYMFIGLAYTQQENWAEANESYSMALRA 303 Query: 283 LEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLEE-INKESVESLVIVSKIALE 337 +E+ P +++IY++ + + R RL + + + E ++ +I +E Sbjct: 304 IEEN-GNGSSPLLSDIYSNKALCASRQGDSEEAHRLCRLAKELAPQDAEPYLLEGRIYME 362 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFL 362 + D A A+ LA++ AP + ++ Sbjct: 363 EDNFDLARAEWALALRYAPEADTWM 387 >gi|312173204|emb|CBX81459.1| Uncharacterized protein HI0366 precursor [Erwinia amylovora ATCC BAA-2158] Length = 243 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 56/163 (34%), Gaps = 5/163 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L+ + A L+ L ++ + GD + A+++ +AL +P Sbjct: 36 AYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQHYHRALAQAPQNG 95 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +V ++ A + ++++ R ++ + G + Sbjct: 96 YVLNNYGAFLCGLGQYDAAERQFSLAREDSVSGLRADSVENSGYC--FLNAGQPDKARKA 153 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290 +++++ A++ K R++ +L +++ N Sbjct: 154 LVDAVQTDP--AKGLPMLAEAERRLGKGRRSESRLLLDVYQHN 194 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 28/167 (16%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R I L G+M A+ + +L + A+ + +AE Sbjct: 23 RHVRVETRIQLGLAYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQ 82 Query: 282 ILEKIWKVNPHPEIANI----YT---------HLLSENTVGK---LKRALRLEEINKESV 325 + H +A Y L + + L R + + +SV Sbjct: 83 --------HYHRALAQAPQNGYVLNNYGAFLCGLGQYDAAERQFSLAREDSVSGLRADSV 134 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 E+ L G D+A + A++ P + +LA+ E+ Sbjct: 135 ENS---GYCFLNAGQPDKARKALVDAVQTDP-AKGLPMLAEAERRLG 177 >gi|291230706|ref|XP_002735306.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 955 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 25/169 (14%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVIL--SILYFFLFAWILLF 59 +RL + +I + V+ + Y P + ++L + W+++F Sbjct: 100 VRLAVLVVELVWLIFGLVWVADH------------YNVCPAGMAKRTVLGIVVCNWVVMF 147 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + K DK +A+ + + R+M + + Sbjct: 148 TLFWILWCTFDRAGRSWVKLKRDKKQEAIKRSM-------SRVERRMSRAKNIMLLANTS 200 Query: 120 YLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRI 167 L L +A A E + +P+ + L E + Sbjct: 201 PLNVALS--LANAFGDVARLFSEFFHELDVVPSDIIAGLL-LLREEQKR 246 >gi|291060017|gb|ADD72752.1| TPR domain-containing protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 658 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 87/278 (31%), Gaps = 24/278 (8%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + + AR + + ++ + L +I +++ + + A + L+ A Sbjct: 100 VGQGELDQARSLFEEILARYPNDVDARFGL--AEIEVSKGRLSSARLLYQAALERQAENR 157 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+ SL S G A Y +AL D V L + A +L + Sbjct: 158 KALLSLALISYEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERA 217 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + R RA+L S +G + + ++ + A SL+ Sbjct: 218 LHIKSAYPRARALL----SAVLYARGAYERAVAQCDQRIRADRTQVDAWYVKTLSLLKLG 273 Query: 275 KKRKAEVILEKIWKVNPHPEIAN------IYTHLLSENTVGKLKRALRLEEINKESVESL 328 K +A + V+P ++ HL E+ ++L + + + Sbjct: 274 KHTEALATAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYR-----MQLARFHTQKADG- 327 Query: 329 VIVSKIALEMGSIDQAHAKAM----LAMKIAPRKEIFL 362 ++ + ++D+ + L Sbjct: 328 --FARRNMSRQALDEYRRALKVYPYDGAAREAYARLLL 363 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 37/251 (14%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A + ++ A E + L+ A+ A L +G+ + A + KA + Sbjct: 27 AGRKAHVQEDWHAAIEFYQEALKKNASYNLAYRGLAECFYALGEYDQALHHVRKAQKLM- 85 Query: 186 DAPWVTEAVVQQYVL-----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + +++ E +A + + R + KG Sbjct: 86 ----AQDLSLEKLCAFSLVGQGELDQARSLFEEILARYPNDVDAR----FGLAEIEVSKG 137 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---- 296 + ++ +L+ + A + A +A +E+ + H + A Sbjct: 138 RLSSARLLYQAALERQAENRKALLSLALISYEAGHYPRALTYVERA--LQYHGDNAQVHF 195 Query: 297 -NIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEM-----GSIDQAHAK 347 Y L E+ L+RAL ++S ++ L G+ ++A A+ Sbjct: 196 FAAYLATLRAHYEDAERYLERAL--------HIKSAYPRARALLSAVLYARGAYERAVAQ 247 Query: 348 AMLAMKIAPRK 358 ++ + Sbjct: 248 CDQRIRADRTQ 258 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 93/278 (33%), Gaps = 28/278 (10%) Query: 84 GYKALYTGLMSIAAHNIPL--ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 Y+ L ++ ++ L RK ++Q + L + + + + A Sbjct: 57 AYRGLAECFYALGEYDQALHHVRKAQKLMAQDLSLEK------LCAFSLVGQGELDQARS 110 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-- 199 E +L A + L G L+SA+ AL+ +A++ + Sbjct: 111 LFEEILARYPNDVDARFGLAEIEVSKGRLSSARLLYQAALE---RQAENRKALLSLALIS 167 Query: 200 -LAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 A + RA+T++ + + + + +A + + + I+S Sbjct: 168 YEAGHYPRALTYVERALQYHGDNAQVHFFAAYLATLRAHYEDAERYLERALHIKSAYPRA 227 Query: 258 NSIMASICAAKSLISQ-----NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 ++++++ A+ + +++ +A+ W V + L L Sbjct: 228 RALLSAVLYARGAYERAVAQCDQRIRADRTQVDAWYV-------KTLSLLKLGKHTEALA 280 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSI-DQAHAKAM 349 A ++ +++ +IA+ D+ + Sbjct: 281 TAKVGLTVDPRDDLMRILLEEIAIVHLEYEDEYRMQLA 318 >gi|195113545|ref|XP_002001328.1| GI22034 [Drosophila mojavensis] gi|193917922|gb|EDW16789.1| GI22034 [Drosophila mojavensis] Length = 708 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 10/134 (7%) Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 ++A + A +Q + + +LY E G L +A++Y AL Sbjct: 453 ARLATDNGNSSRAFHHYLKAVQLYPEYESALMNLGNLYRE---YGQLETAEKYIRAALAA 509 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P P + K++ +A+ Q K ++ A+ ++ Sbjct: 510 YPAFPVAWMNLGIVQSAQKKYDQALDSYRQALKYRSDY----AVCYYNMGNLFLEQHQYG 565 Query: 244 ASYHDAIESLKLCD 257 + H ++ + Sbjct: 566 EALHHWQHAVAINP 579 >gi|171779263|ref|ZP_02920234.1| hypothetical protein STRINF_01111 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282319|gb|EDT47746.1| hypothetical protein STRINF_01111 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 174 Score = 44.2 bits (103), Expect = 0.047, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Query: 2 LRLIRYFFVISLVICSFIIVS------HYPEDVSITWGNRLYRTSPFVILSILYFFLFAW 55 +++I Y ++ +++ F I + ++ ++ +G + + S ++ + +L + + Sbjct: 13 VKIICYLSIVGMILMGFGIFAVFFAGQNHGGLFTLDYGYQRVQVSVWIPIVVLIMAMIIF 72 Query: 56 ILLFAVSRFF 65 LLF + R Sbjct: 73 YLLFRIMRAL 82 >gi|330825813|ref|YP_004389116.1| tetratricopeptide repeat-containing protein [Alicycliphilus denitrificans K601] gi|329311185|gb|AEB85600.1| tetratricopeptide repeat protein [Alicycliphilus denitrificans K601] Length = 385 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 65/148 (43%), Gaps = 6/148 (4%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +YN A E +L RE A ++L + + G L+ A+ A + L+ +P Sbjct: 85 GEYNRAVRVHEHLLSRGDLSRTDRERAQHALALDFLKAGLLDRAED-ALRRLEGTPFEAQ 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248 A++ Y +++W++A + + + +++ +A L ++L A +G++ A+ Sbjct: 144 ARMALLAIYERSRDWAQASDIAQRMQAAQQGDFSTRQAHYLCEQALPLAARGELQAAQAL 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKK 276 +++ + A I A+ + Sbjct: 204 LEQAVATAPQAPRARIEMARLQQRMGRP 231 >gi|320103243|ref|YP_004178834.1| hypothetical protein Isop_1701 [Isosphaera pallida ATCC 43644] gi|319750525|gb|ADV62285.1| hypothetical protein Isop_1701 [Isosphaera pallida ATCC 43644] Length = 341 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 3/134 (2%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 ++ ILL +++ ++G+ A+ H S+ + + A+ Q +R+A Sbjct: 181 HQPILLDLKAVAALERGEFDAAQHAWNASIAVDPRRATPWLLRARWARRQGDERQAAECF 240 Query: 284 EKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 EK + P P + Y G+L+ A L ++ E +I + + Sbjct: 241 EKARSLRPDEPILLREYAGFERG--RGRLQHAAALLARAQKVAEGRMIQGGMGAVEDRPE 298 Query: 343 QAHAKAMLAMKIAP 356 + + + ++ P Sbjct: 299 RPRSILPIEVEAPP 312 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 4/105 (3%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQ 174 ++ ++ L+ AL +++ A + + R + + R GD A Sbjct: 180 DHQPILLDLKAVAALERGEFDAAQHAWNASIAVDPRRATPWLLR--ARWARRQGDERQAA 237 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 KA + PD P + A L + +K A+ Sbjct: 238 ECFEKARSLRPDEPILLREYAGFERGRGRLQHAAALLARAQKVAE 282 >gi|311277544|ref|YP_003939775.1| cellulose synthase operon C domain-containing protein [Enterobacter cloacae SCF1] gi|308746739|gb|ADO46491.1| cellulose synthase operon C domain protein [Enterobacter cloacae SCF1] Length = 1164 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 86/282 (30%), Gaps = 57/282 (20%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY----- 136 D G++A GL ++ A A + +E + L Q Sbjct: 268 DPGFRAKAEGLAAVDAGQGGKAVSELQQAVNSNHNDSEAVGAL--GQAYSQRGDRARAVA 325 Query: 137 -------------------------------------------NIAHEKLEMMLQIPATR 153 + A ++ T Sbjct: 326 QFEKAIAMDPQSPNRSKWDSLLKTNRYWLLIKQGDEALKANNPDQAQRYYSQAQRVDNTD 385 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRA-ITFL 211 +AV L + D +A+RY T+AL + + + E + A I L Sbjct: 386 SYAVLGLGDVAAARKDNATAERYYTQALRMDRGNSNAVRGLANVYRAQSPEKATAFINSL 445 Query: 212 NQKKKNAKEWNRNRAIL---LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + ++ + + + R++ L ++ ++G + L L +S+ + AK Sbjct: 446 SASQRRSID-DIERSLTNERLSQQAEALENQGRWAQAADVQRRRLALDPDSVWVTYRLAK 504 Query: 269 SLISQNKKRKAEVI-LEKIWKVNPHPEIANIYTHLLSENTVG 309 L + ++ +A+ + L K + P+ Y LS N Sbjct: 505 DLSAAGQRTEADNLMLALARKKSGDPDQVYAYALYLSGNNQD 546 Score = 37.6 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 100/320 (31%), Gaps = 34/320 (10%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHE 141 Y L G ++ A + A + ++ + ++ L + Q + + Sbjct: 387 YAVLGLGDVAAARKDNATAERYYTQALRMDRGNSNAVRGLANVYRAQSPEKATAFINSLS 446 Query: 142 KLEMMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + R L ++ G A + L + PD+ WVT + + Sbjct: 447 ASQRRSIDDIERSLTNERLSQQAEALENQGRWAQAADVQRRRLALDPDSVWVTYRLAKDL 506 Query: 199 VLAKEWSRA---ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-- 253 A + + A + L +KK + A+ L + + A + A S Sbjct: 507 SAAGQRTEADNLMLALARKKSGDPDQVYAYALYLSGNNQDLAALSHLNALPRSQWNSNIQ 566 Query: 254 KLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTV 308 +L D + A L + +A +L++ P P ++ +T Sbjct: 567 ELADRLQAGQVLQQANLLHDSGHEAQAIALLKQ----QP-PSTRYDLTLADWAQQRGDTQ 621 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--------EI 360 + + + + ++ + ++++ E G+ A + P I Sbjct: 622 TAISEYNAVLAKDAGNDDAHLGLAEVYSEDGNSTTAREQLAKLKAPTPDAPRSINMQRRI 681 Query: 361 FLLLAQIEQANSHNTDKILY 380 L+ A + +T + Sbjct: 682 ALVYAAL-----GDTAQAEQ 696 >gi|158337251|ref|YP_001518426.1| Slt family transglycosylase [Acaryochloris marina MBIC11017] gi|158307492|gb|ABW29109.1| transglycosylase, SLT family [Acaryochloris marina MBIC11017] Length = 722 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 24/195 (12%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIG 168 + + A + M+ P +E + +L + Sbjct: 251 ALAYAQAPQTSQTAYRGARGLQLGGEKKQARAAYQKMIAAYPQAKETPL-ALSKLASLEP 309 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN---- 224 DL A ++ +A +S D + + +L + I L + K+ + + + Sbjct: 310 DLGKAAQHYDRAFQLSKD----QQPTLAAQILGER----IQRLKKAKQLSSTFEKTLLQQ 361 Query: 225 ------RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSLISQNKK 276 A L ++ + G++ + A+E K NS A ++ A S ++ Sbjct: 362 FSDSNDAATLRWQQAEQQRKAGNLAGARKLALEIQKQNPNSPQAATAVFWAGKWASTAEE 421 Query: 277 RKAEVILEKIWKVNP 291 R+A + +W+ P Sbjct: 422 RQAA--FQTLWQTYP 434 >gi|149371674|ref|ZP_01891090.1| Tetratricopeptide TPR_2 repeat protein [unidentified eubacterium SCB49] gi|149355301|gb|EDM43861.1| Tetratricopeptide TPR_2 repeat protein [unidentified eubacterium SCB49] Length = 788 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 83/234 (35%), Gaps = 16/234 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + Y+ A + + L + + +L + G+ A++Y KA+ ++P + Sbjct: 465 ALMTKGDYDSAEKYFKEALILTPSYSVLHINLAVLNKAKGNKIEAEKYYKKAMLLAPSSH 524 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + L + + + + + +L+ + Sbjct: 525 RPLFFYGKFLIDEGRVKEGQELLLKGLDISPNFAKAQDLLM----KSYHELNQWEELNTL 580 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303 A LK N + A K L K+ E++LE+ + NP PE Y ++ Sbjct: 581 ANTILKSRPN----NKAALKYLDISLNKKTVEIVLEEDIEKNPTPE---KYLNISLMYFN 633 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 N ++ A + ++ + E+ + +G D+A A+KI P Sbjct: 634 KGNFKKTIETARKALKLKSDYPEAYNNIGIAYHNLGKNDKAVEAYNKALKIKPD 687 >gi|146412754|ref|XP_001482348.1| hypothetical protein PGUG_05368 [Meyerozyma guilliermondii ATCC 6260] Length = 636 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%) Query: 53 FAWILLFAVSRFFLSCPAMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSY 109 W+ + + P K + GY + G A + + M +Y Sbjct: 364 VTWLAIGTYYLLVNNLPEA-RKFFSKATLLDPNHGYAWI--GFGHTFAADGEHEQAMSAY 420 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + +L +L +++A E L+ + QI AT + L + Sbjct: 421 AFAARLYPGTHLPHLFLGMQHFLMNNFSLAQEYLQSLYQICATDPLLLNELGVVCFHRNN 480 Query: 170 LNSAQRYATKALDISPDA-----PWVT-EAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222 L+ AQ Y +AL + W++ + + +K+ +A+ Q + + Sbjct: 481 LSRAQAYFEEALAAAKHLNADSKAWISIHTNLGHTFRRSKQLEKALECFQQVLR---LSH 537 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 ++ A +L A L + G+ + SL + ++ +A+ ++L Sbjct: 538 KDDASILAAVGLVHLKLGNASMAVESLHNSLAISPSNPIANDLLKRAL 585 >gi|47086921|ref|NP_998455.1| dnaJ homolog subfamily C member 7 [Danio rerio] gi|46249719|gb|AAH68391.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [Danio rerio] Length = 472 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 63/184 (34%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ +Y A +L++ +T V L Y+E C ++ A ++ Sbjct: 164 KVLKADCLALLGRYPEAQSVASDILRMDSTNGDALYVRGLCLYYEDC----IDKAVQFFV 219 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 220 QALRMAPDHEKARLACRNAKALKAKKEEGNKAFKEGSYEEAYELYTEALTIDPNNIKTNA 279 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R+ + + + D +++KL + I A + A+ + + +A EK+ Sbjct: 280 KLYCNRATVGSKLNKLEQAIEDCTKAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDYEKV 339 Query: 287 WKVN 290 ++ Sbjct: 340 YQTE 343 >gi|67921673|ref|ZP_00515191.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856785|gb|EAM52026.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 226 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 66/174 (37%), Gaps = 21/174 (12%) Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 LY ++ + GDL +A +A++ +P Y L K+ A+ NQ K Sbjct: 42 LYQQALEKVKKGDLKAALEDYNQAIEANPQNSDAYSNRGNAYFLLKQPEEAMKNYNQAIK 101 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E +R R +G + D +++ L + I A + A L Sbjct: 102 LDPELSRP----YYNRGFLYQREGKPELAVKDYNKTISLNPDYIPAYLNRAVVLSILGDN 157 Query: 277 RKAE----VILEKIWKVNPH-PEI----ANIYTHL-LSENTVGKLKRALRLEEI 320 + A ++E +P+ P++ A Y+ L E + L++A +L Sbjct: 158 QGAIEDYNKVIET----DPNLPQLYFNRAASYSELGNPEKAMEDLEKASQLFAK 207 >gi|294140848|ref|YP_003556826.1| hypothetical protein SVI_2077 [Shewanella violacea DSS12] gi|293327317|dbj|BAJ02048.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 386 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 84/269 (31%), Gaps = 32/269 (11%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + + ++ P R+ A+ L + G + A+ + + Sbjct: 83 GEVDRSIRIHQNLIARPSLTNEQRDIAMMELGKDYLAAGFYDRAEEIFINLVQQEDHSED 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y + K+W +AI + K+K + N A + E D+ Sbjct: 143 AETHLIDIYQVTKDWQQAINIIKSLKRKRQQSLRHNTAHFYCELANE---SSDVDTQLKL 199 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-T 307 +LK + A + A+ + ++ K + +L K + + L + + Sbjct: 200 LQAALKQDSDCGRALLTQAEKYLDLHEYAKCKALLVK---------LLDADIELFPDALS 250 Query: 308 VGK--------LKRALRLEEINKESVESL---VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + L L ++ + +++ +E G +A + + P Sbjct: 251 IARQVFHDSHDLTGYRDLLRQALQNGAGASVAITLAQNMIEQGETQEAEQLVLDGLYRHP 310 Query: 357 RKEIFL-LLAQIEQANSHNTDKILYWTQS 384 + F L+ + Sbjct: 311 TMKSFQHLMKM--HVQQAEDGQAKESLTM 337 >gi|51597159|ref|YP_071350.1| fimbrial biogenesis protein [Yersinia pseudotuberculosis IP 32953] gi|153948563|ref|YP_001400165.1| type IV pilus biogenesis/stability protein PilW [Yersinia pseudotuberculosis IP 31758] gi|186896254|ref|YP_001873366.1| type IV pilus biogenesis/stability protein PilW [Yersinia pseudotuberculosis PB1/+] gi|51590441|emb|CAH22081.1| putative fimbrial biogenesis protein [Yersinia pseudotuberculosis IP 32953] gi|152960058|gb|ABS47519.1| type IV pilus biogenesis/stability protein PilW [Yersinia pseudotuberculosis IP 31758] gi|186699280|gb|ACC89909.1| type IV pilus biogenesis/stability protein PilW [Yersinia pseudotuberculosis PB1/+] Length = 249 Score = 44.2 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 2/162 (1%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L LA+ A + LE ++ + F + RIG+ ++A++ +A+ Sbjct: 35 TRLQLGLAYLAQGDLTAARKNLEKAVEADPQDYRTQLGMAFYAQRIGENSAAEQRYQQAM 94 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++P V ++ A + ++ Sbjct: 95 KLAPGNGTVLNNYGAFLCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYC--FLRANQ 152 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + +LK + + A+ + + +A+++L Sbjct: 153 DKQARVLLSRALKYDPDKGEPLLAEAQRYFGEGNRAQAQLLL 194 >gi|297182821|gb|ADI18973.1| hypothetical protein [uncultured delta proteobacterium HF0010_10I05] Length = 265 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 73/196 (37%), Gaps = 11/196 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-------ITFLNQKKKN 217 +G+ A++ + + ++ + P + + YV +W + Sbjct: 27 LEVGEWGIAEQLSHEIDRLAHNHPEALMGLREVYVQRGDWPACVRQERHILELYPDGVIG 86 Query: 218 AKEWNRNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + +R+ L +A E + + +++K S+ A+I A L + Sbjct: 87 DQVRSRHEQRLHLAAEQEPELLNNWSMKYLPGGKKAIKHL-YSVSAAISEANHLHQNGQS 145 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKI 334 KA +L ++ N P + + L ++ N LE +K S+ + +++I Sbjct: 146 IKAAELLRTSFEQNGTPRLLDELERLYTDTGNNQTIYDMLECLENSSKTSLYVTLTLARI 205 Query: 335 ALEMGSIDQAHAKAML 350 L G+ ++A + Sbjct: 206 NLRSGNTEEAQRRLQQ 221 >gi|300868094|ref|ZP_07112731.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506] gi|300333932|emb|CBN57909.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506] Length = 558 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 65/195 (33%), Gaps = 16/195 (8%) Query: 170 LNSAQRYATKALDISP--DAPWV-TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A +A I P W A++ + A+ ++ + + Sbjct: 327 YQEAIASYDRATKIKPDFHLAWRDRGALLAFLKQDR---EALASFDRALQFKPDDYVAWY 383 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 I + D IASY +++++ + A ++L + + A L+K Sbjct: 384 IRGDLLAGNLQRYEDAIASYD---QAIRIKPDFAPAWTGRGEALYDLRRYQDAIASLDKA 440 Query: 287 WKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +++ P+ + L E + I ++ + ++ + + + Sbjct: 441 IQID--PKQGEAWTLKGTLLLELERYSEAVLAYDLSIAIAPDNYQLWMLRAAALVGLKRE 498 Query: 342 DQAHAKAMLAMKIAP 356 +A A A+K+ P Sbjct: 499 SEARKSAQQALKLKP 513 >gi|322421649|ref|YP_004200872.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320128036|gb|ADW15596.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 1442 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 18/187 (9%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-----------AILLIARSL 234 D+PW + + +W + + Q R R A L Sbjct: 873 DSPWYPTMRLFRQGSPGDWEGVLHRVLQALGELVLAKRGRRQVPAPGPMPQAELYNNEGC 932 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 G + + +++ SL + + +A ++ P Sbjct: 933 ALDSAGRQLEALESYRKAIAQSPEFAAPHYNMGNSLYTLGRSAEAIDCYRHALAID--PA 990 Query: 295 IANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +A + +L + L R +E+ + ++ MG +D A A Sbjct: 991 LARGWHNLALALKETGEQQQALHALKRAVSAAPGYLEARHNLGELYHAMGELDLAEATFR 1050 Query: 350 LAMKIAP 356 + P Sbjct: 1051 GILAGDP 1057 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 11/165 (6%) Query: 74 HMLHKRN-----YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 +R +D G L L++ A A + +Q E L + Sbjct: 450 RSFLERRLASHPFDGGSHYLCGALLA-ATGRGREATARFTKAAQLLPGQWEPHYAL--AR 506 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 ++ A E LE + + +L GDL A + KAL + P Sbjct: 507 ALQQMGRFEEAGESLEAAVALEEGLPLLHEALGIVKQVRGDLRGAVQSYQKALSLDPSLI 566 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR---AILLI 230 + +++A+ + + + ++ R A+LL+ Sbjct: 567 KARYNLATASRDLGRFAQALQEFRELVRRSPDYGDARWNLAVLLL 611 >gi|212693910|ref|ZP_03302038.1| hypothetical protein BACDOR_03432 [Bacteroides dorei DSM 17855] gi|212663442|gb|EEB24016.1| hypothetical protein BACDOR_03432 [Bacteroides dorei DSM 17855] Length = 316 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 80/268 (29%), Gaps = 49/268 (18%) Query: 99 NIPLARKMHSYVSQQHTF------HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + A++M F ++E L + + A L+ M Sbjct: 32 DGIRAQRMGKLPYAIKCFEEAVAINDELETLSLLATAYTQANRLDDARITLDRMATKDPE 91 Query: 153 R---EFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + ++ + Y + D + + KAL + P + + K+ AI Sbjct: 92 QVNTFLSLAGICYMQ----EDYENMKDACQKALVLDNKNPLSFYLTAKAAIGMKDDITAI 147 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + +++ + R+ + D + L L + A + + Sbjct: 148 AMLTKAIVLKEDYTEAYQL----RAEVLWKMKQAKDAAEDIQKLLSLNPDDEQALLLKGE 203 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 L + N+ PE A ++ +N + ++ Sbjct: 204 ILAATNE-----------------PEQAQEC--------------FNQVLSLNPFNEKAY 232 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ ++ L D+A A++I P Sbjct: 233 ILSGELYLANKDFDKALVIYDEAIEINP 260 >gi|75909068|ref|YP_323364.1| hypothetical protein Ava_2856 [Anabaena variabilis ATCC 29413] gi|75702793|gb|ABA22469.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 297 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 71/209 (33%), Gaps = 20/209 (9%) Query: 160 LYFESCRIGD---LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L E+ ++G A A A ++P V + + K + AI LN+ Sbjct: 54 LAQEAAQLGQFQQYELALARAKLASQLAPGNDKVWFLLGGLQLQTKNFDGAIASLNR--- 110 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-------NSIMASICAAKS 269 +K N A +L A N + + L L + A + Sbjct: 111 -SKTINPKNADVLFALGSANFQQKKYQVAIEHYQAGLALKPNEADGLFDLGNAYYMIGRL 169 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESL 328 + + KA +K W P I NI N +KR I+K++ E L Sbjct: 170 PDAIAQYNKAVAQDKKFW-----PAINNIGLISYEQGNVDEAIKRWQSAVAIDKQAAEPL 224 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ G Q + A++I PR Sbjct: 225 LALAVALYTKGDRQQGISLGEAALRIDPR 253 >gi|71000759|ref|XP_755061.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293] gi|66852698|gb|EAL93023.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293] Length = 522 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 59/200 (29%), Gaps = 12/200 (6%) Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173 + L L+ + LA A + + + + +G A Sbjct: 28 PDTPLASLVASAKAHLASGSARDALLYFDAAVSRDPSNYLTIFQRG--AAYLSLGRTAQA 85 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIA 231 + L + PD + +W A+ + K + R A Sbjct: 86 LDDFDRVLQLKPDFESALLQRARLRTKTADWDGALHDFERAGKRLSDEYRETQEARDAAF 145 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288 ++ + +G A ++ S+ A + + + L + + Sbjct: 146 QAFDAEKQGAWDDCVGRANTAISKASTSLSLRQTRAHCRFEKGEVEEGISDLVHVLQLSP 205 Query: 289 --VNPHPEIANIYTHLLSEN 306 + PH +I+++ + L ++ Sbjct: 206 GLIEPHLQISSMLFYALGDS 225 >gi|297468007|ref|XP_600406.5| PREDICTED: CG4050-like [Bos taurus] Length = 903 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 70/191 (36%), Gaps = 10/191 (5%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 500 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 559 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324 L+ NK KA E L+ + + ++ H+ + LK E+N + Sbjct: 560 LLLKMNKPAKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNDALKNFNHALELNPKHK 619 Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 S +++ + E+ +A + + + P + L + + +++ Sbjct: 620 LALFNSAILMQESG-EVRLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 677 Query: 381 WTQSALHAMPD 391 W + A+ D Sbjct: 678 WMKKAIKLQAD 688 >gi|297474384|ref|XP_002687234.1| PREDICTED: CG4050-like [Bos taurus] gi|296487992|gb|DAA30105.1| CG4050-like [Bos taurus] Length = 915 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 70/191 (36%), Gaps = 10/191 (5%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324 L+ NK KA E L+ + + ++ H+ + LK E+N + Sbjct: 572 LLLKMNKPAKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNDALKNFNHALELNPKHK 631 Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 S +++ + E+ +A + + + P + L + + +++ Sbjct: 632 LALFNSAILMQESG-EVRLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 689 Query: 381 WTQSALHAMPD 391 W + A+ D Sbjct: 690 WMKKAIKLQAD 700 >gi|237713817|ref|ZP_04544298.1| TPR-repeat-containing protein [Bacteroides sp. D1] gi|262409276|ref|ZP_06085819.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644713|ref|ZP_06722462.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294805926|ref|ZP_06764793.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|229446264|gb|EEO52055.1| TPR-repeat-containing protein [Bacteroides sp. D1] gi|262352728|gb|EEZ01825.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639976|gb|EFF58245.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294446808|gb|EFG15408.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] Length = 272 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 9/169 (5%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q K + N A+L L G+ + +L ++ + Sbjct: 40 AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98 Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321 A + K +A +L++ K N + Y + L + ++ RL E++ Sbjct: 99 AAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 +S + ++ + + G +A + P +++ A +E+ Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALEILNKMLAATPEDATLYIARADVER 205 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 6/166 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L I + + + A+ +++ + +E + Y R D +A+ + Sbjct: 94 ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ P + + ++ A+ LN+ E A L IAR+ + Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMLAATPE----DATLYIARADVEREMK 208 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L S A + ++Q KK A+ EK Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254 >gi|254512447|ref|ZP_05124514.1| adenylate cyclase Cya3 [Rhodobacteraceae bacterium KLH11] gi|221536158|gb|EEE39146.1| adenylate cyclase Cya3 [Rhodobacteraceae bacterium KLH11] Length = 613 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 26/214 (12%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-----------LAKEWSRAITFLN 212 A+R+A +A+ + P + + A Sbjct: 380 KITKEAHTDARRFAQQAIALDPGYS-APHCTLGFICTVEARHGFVADRRATLAEARDCAQ 438 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + AI A +++ G ++++ E+L L N + + +L Sbjct: 439 RALEIDSYNPEAHAIAGFADAID----GKLVSAIEKFNEALALNPNHADVAARLSLTLGF 494 Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVE 326 + R+A + ++ +NPH P Y +L + + K+A E Sbjct: 495 NGQAREAIRVAQQAITLNPHYP---GWYAGVLGLALRLDGQYEEAKKAFTEYGQRVEG-F 550 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + + + +E ++D A +A MK P+ I Sbjct: 551 GHLDLVIVHVETENLDAARDEARNVMKFRPQFSI 584 >gi|148259001|ref|YP_001243586.1| TPR domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146411174|gb|ABQ39680.1| putative TPR domain protein [Bradyrhizobium sp. BTAi1] Length = 648 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 105/327 (32%), Gaps = 45/327 (13%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A ++ A + L + Q+ LA ++++ A E +++ + Sbjct: 36 LRAGDLVQAEDSCRRALSLDAGSVDALRAM--GQVCLALKRFDDAIEWFARAIRLDISVP 93 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 ++ L G L+ A + + L + PDA +A+ + ++ A ++ Sbjct: 94 ESLIGLAEALRSAGRLDDAIKAYDRVLQLRPDAQDCWDALGELLQRTGRYAEAALACDRL 153 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A + R + LE D+ D A D + LK + + A+ A Sbjct: 154 LQLAPD--RATTWFRLGEVLEAQDRRDEAALAFD--QVLKATPDHVDAANKAGAVHFDAG 209 Query: 275 KKRKA--------------EVIL--------------------EKIWKVNPH-PEIANIY 299 + +A +L ++ + PH P+IAN Y Sbjct: 210 RYDEAIARFDRSLAVRPDQAGVLCLKAIALRRLRRYQDAQPCGQRAHVLAPHDPDIANSY 269 Query: 300 THLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +L + + + ++ E E+ D+A A A+ + P Sbjct: 270 GCILQNLGRHDEAVAVFDKAIALRPQTAEFYNHRGTSLAELHRFDEAFASFDRAVALKPD 329 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQS 384 A + + + + W Sbjct: 330 LADAHWNAALFRLLTGD--FARGWAAR 354 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 80/243 (32%), Gaps = 28/243 (11%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R GDL A+ +AL + + A+ Q + K + AI + + + + + Sbjct: 36 LRAGDLVQAEDSCRRALSLDAGSVDALRAMGQVCLALKRFDDAIEWFARAIR--LDISVP 93 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKSLISQNKKRKAE 280 +++ +A +L DAI++ + + L + +A Sbjct: 94 ESLIGLAEAL------RSAGRLDDAIKAYDRVLQLRPDAQDCWDALGELLQRTGRYAEAA 147 Query: 281 ----VILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331 +L+ P+ A + L + ++ + + V++ Sbjct: 148 LACDRLLQLA------PDRATTWFRLGEVLEAQDRRDEAALAFDQVLKATPDHVDAANKA 201 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA-LHAMP 390 + + G D+A A+ ++ + P + L L I Q A + A Sbjct: 202 GAVHFDAGRYDEAIARFDRSLAVRPDQAGVLCLKAIALRRLRRYQDAQPCGQRAHVLAPH 261 Query: 391 DPL 393 DP Sbjct: 262 DPD 264 >gi|126347672|emb|CAJ89386.1| putative TPR repeat protein [Streptomyces ambofaciens ATCC 23877] Length = 1035 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 82/312 (26%), Gaps = 21/312 (6%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G+ G + A A + + + L +Y+ A L Sbjct: 625 GWALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQ--RGAAHRLAGRYDDAVTDL 682 Query: 144 EMMLQIPATR--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 L + G A T A D++P WV + LA Sbjct: 683 TAALDLAPASAGLLGQRG--EAHLMAGRYEQAVADLTAAHDLNPTDDWVLGQRGAAHRLA 740 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A+T ++ L +R + + D +L + + Sbjct: 741 GRYDDAVTDFTAALAIDPAYD----WALASRGAAHRQAERYDQAVTDLTAALAIDPANDW 796 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE--- 318 A + + +A L + P A + + R + Sbjct: 797 ALAQRGAAHRLAGRYDQAVTDLTAALAITP----AYPWALAQRGESHRLAGRYEQAVTDF 852 Query: 319 ----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 ++N +L + G +QA A+ IAP L + + + Sbjct: 853 TAALDLNPTDDWALASRGQAHQLAGRYEQAVTDFTAAVDIAPTLAWPLGMRGRAHRQAGH 912 Query: 375 TDKILYWTQSAL 386 + + A+ Sbjct: 913 YARARADLERAV 924 >gi|18266639|gb|AAL67585.1|AC018929_7 myosin-like protein [Oryza sativa Japonica Group] gi|31433673|gb|AAP55157.1| expressed protein [Oryza sativa Japonica Group] gi|125575798|gb|EAZ17082.1| hypothetical protein OsJ_32580 [Oryza sativa Japonica Group] Length = 943 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 68/241 (28%), Gaps = 37/241 (15%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ Q+ + A E + I + ++ L D ++AQ A +ALD Sbjct: 86 QLLQAQLNAVQEDLKNAREH---LAVIDRDKAQLLHDLSLARRLADDAHAAQSAAEEALD 142 Query: 183 ISP-DAPWVTEAVVQQ-YVLAKEWSR---AITFLNQKKKNAKEWNRNRAILLIARS---L 234 + + + + ++W+ AI L + + A+ + L + Sbjct: 143 LERFKSIEREQLAIDLAQTKERDWNARCHAID-LRRAELAAELGRVKDELALAVEATNTA 201 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + A E +L A+ AK + R Sbjct: 202 RQIADANADKAATLAAEVSRLQSELETKAEEATAIVAKLESEASGLRA------------ 249 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLE-EINKESVESLVIVSKIALEMGSIDQAHAKAM 349 E+ N + + RA +L + + + + L Sbjct: 250 ---ELQNAEASRKED-----VGRAEQLLHGLKVDIAYAKRAEADANLAAQEWKTKAESLQ 301 Query: 350 L 350 Sbjct: 302 A 302 >gi|302382876|ref|YP_003818699.1| hypothetical protein Bresu_1765 [Brevundimonas subvibrioides ATCC 15264] gi|302193504|gb|ADL01076.1| tetratricopeptide repeat (TPR) protein [Brevundimonas subvibrioides ATCC 15264] Length = 494 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 67/233 (28%), Gaps = 10/233 (4%) Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHN-IPLARKMHSYVSQ 112 A LL R A L + G A+ ++ A + A + Sbjct: 41 ALKLLARALRSLGETAAALPLLERVARRQPG-SAIAEHNLAAALGDAGRQADSEAAARRA 99 Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLN 171 + L+ + LA+ + A L + AV L R GDL+ Sbjct: 100 IAKGGSAPETRLILARALLAQGDLDEAEVWFRRALDLRGDFLPAVRDLSQLVWMRSGDLS 159 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 ++ A+ L ++ ++ ++ Sbjct: 160 RTLAVLEPLKALAESREDAAILRASILRDTAGDDAALASLVPWLESG-------SVEVLL 212 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + A D + A +L A I A +L++ ++ +A +LE Sbjct: 213 AAAAAASGVDPQRALVHARNALTRAPGDPRAGIALAAALVATDQAPEAATLLE 265 >gi|34496823|ref|NP_901038.1| hypothetical protein CV_1368 [Chromobacterium violaceum ATCC 12472] gi|34102678|gb|AAQ59043.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 434 Score = 44.2 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 41/158 (25%), Gaps = 4/158 (2%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L Q + A +L A A + L F + G L+ A + + + Sbjct: 9 LRRAQRLHLSGDADGAERAYRALLDDAALGAPAAHWLGFLLMQQGRLDEALAWLERVVAA 68 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + A+ L + + +R + G Sbjct: 69 DDGHAEWHFNLGLVRARLGRSEEAVFALREAARRDP----SRYFYWTNLGAQLMRGGQDA 124 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + + L + A + L+ Q + +A Sbjct: 125 EAEQALRRAASLDPHCPDAFYLLTEMLLRQGRHAEARR 162 >gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein [Methanothermobacter marburgensis str. Marburg] gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein [Methanothermobacter marburgensis str. Marburg] Length = 406 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 8/171 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKA 180 +L + +L + +Y A ++ + P E Y+ + + A K Sbjct: 19 HLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKR--PEKALECYEKI 76 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L +P + A+ + K ++ A ++L + G Sbjct: 77 LKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKY----AGAWNNKALVLKELG 132 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++L++ A LI K +KA EK ++NP Sbjct: 133 RYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNP 183 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 43/154 (27%), Gaps = 30/154 (19%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE------- 220 G + + KAL I+P + A+ + + E Sbjct: 234 GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNN 293 Query: 221 --------WNRNRAILLIARSLE---------------NADKGDMIASYHDAIESLKLCD 257 A+ ++LE D + S ++LKL Sbjct: 294 KGLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNP 353 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + K+L K ++A EK K++P Sbjct: 354 QNKTLWYMQGKTLQKLGKHKEALKCYEKSLKIDP 387 >gi|283852703|ref|ZP_06369968.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio sp. FW1012B] gi|283571881|gb|EFC19876.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio sp. FW1012B] Length = 800 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 5/155 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 AR + + H L+ L ++A R+++ A + + + Sbjct: 648 GENAAARSAFQKCLRANPGHVYSLLRL--GRMAEESRRFDAALKYYKRAAGAKNGPALTL 705 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + + G L+ A+ + +AL P + + + Y+ + AI ++ Sbjct: 706 RHLARLAFKRGRLDEAREHLHQALLHDPKDAFSLHLMARLYLEEGQ-DPAIAEAMARQAV 764 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A +R +AR+L +G S + Sbjct: 765 ALRPDRGEFWKELARALSV--QGKADESREALARA 797 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 63/204 (30%), Gaps = 23/204 (11%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + ++ A A+Y+L R+G+ +A+ K L +P + Sbjct: 614 GRLPQARAEFTQVIGRDAKNTMALYNLGCVCRRLGENAAARSAFQKCLRANPGHVYSLLR 673 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + ++ + A+ + K A A+ L + +G + + ++L Sbjct: 674 LGRMAEESRRFDAALKY----YKRAAGAKNGPALTLRHLARLAFKRGRLDEAREHLHQAL 729 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + A+ + + + P IA + + Sbjct: 730 LHDPKDAFSLHLMARLYLEEGQD----------------PAIAEAMARQAVALRPDRGEF 773 Query: 314 ALRLEEINK---ESVESLVIVSKI 334 L ++ ES +++ Sbjct: 774 WKELARALSVQGKADESREALARA 797 Score = 36.5 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 16/135 (11%) Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKE 323 + A +K + NP ++Y+ L + +R R Sbjct: 645 RRLGENAAARSAFQKCLRANP----GHVYSLLRLGRMAEESRRFDAALKYYKRAAGAKNG 700 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWT 382 +L ++++A + G +D+A A+ P L+A++ + Sbjct: 701 PALTLRHLARLAFKRGRLDEAREHLHQALLHDPKDAFSLHLMARLYLEEGQDPAIAEA-M 759 Query: 383 QS---ALHAMPDPLW 394 AL W Sbjct: 760 ARQAVALRPDRGEFW 774 >gi|238026511|ref|YP_002910742.1| TPR domain-containing protein [Burkholderia glumae BGR1] gi|237875705|gb|ACR28038.1| TPR domain protein [Burkholderia glumae BGR1] Length = 616 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 31/257 (12%), Positives = 70/257 (27%), Gaps = 13/257 (5%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + L + A+ ++ A E L++ +L +G + Sbjct: 95 ALSLAPDFPLAHYNLGNAYAAQARHEDAAAAFERALRLTPGDASIHNNLGNALNALGRHD 154 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A +AL++ P + AI + Sbjct: 155 DALAAFRRALELRPGHAGAHNNLGMALSALGRVDEAIDHFRAALAAEPRF----VAAHFN 210 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 G + H +L L +A + +L + + +A E+ ++P Sbjct: 211 LGNTLDAVGRHAEAIHAFERALALHPALPVALLGLGNALAALGRHAEARARYERAIGLDP 270 Query: 292 H--P---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI--DQA 344 P + + L + L+ + + + + + + L +G Sbjct: 271 SLVPGWLNLGTAHHALGAHELA--LRAFDQALRLAPDHTLARMHRAVTLLTLGDFARGLP 328 Query: 345 HAKAMLAMKIAPRKEIF 361 +A A+ AP Sbjct: 329 DYEARHALPGAPDAGGL 345 >gi|147790353|emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera] Length = 629 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 71/230 (30%), Gaps = 20/230 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 NI AR + + + NEY+ + LLE + ++ A + + Sbjct: 262 GNIKKARHLLAKGLKY-GGGNEYIYQTLXLLEAKA----NRHEQARYLFKQATKCNPKSC 316 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFLN 212 + + + + ++A++ KA+ SP + V + + + + Sbjct: 317 ASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFAWHVWGVFEANLGNAD-------VG 369 Query: 213 QK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +K K N +LL + +L S + +L I Sbjct: 370 RKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRRASELDPRHQPVWIAWGWMEW 429 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE 319 + A + ++ ++ E A E G L A RL Sbjct: 430 KEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAGNLSAARRLFR 479 >gi|114570515|ref|YP_757195.1| hypothetical protein Mmar10_1965 [Maricaulis maris MCS10] gi|114340977|gb|ABI66257.1| Tetratricopeptide TPR_2 repeat protein [Maricaulis maris MCS10] Length = 595 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 7/137 (5%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + L R+++++ +GD + + A ++ L + + + L + + +A Sbjct: 53 QKVAALAKRAMKSSAEGDNVGAARLAHKAYLLAPDMALTNHVLGLMLYNLGRLSRALDFF 112 Query: 284 EKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRL-EEINKESVESLVIVSKIALEM 338 E WK++ P A IY L N + ++ RL ++ +V++ + + + + Sbjct: 113 EVAWKID--PSDAEIYQKLGLVAWKLNMLEAAEKFYRLQYKLAPAAVDAAINLGGVLRDA 170 Query: 339 GSIDQAHAKAMLAMKIA 355 G ++A A+ Sbjct: 171 GKFEEAIEILRTAIYAH 187 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 28/232 (12%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRN 224 GD A R A KA ++PD + SRA+ F K + + Sbjct: 67 AEGDNVGAARLAHKAYLLAPDMALTNHVLGLMLYNLGRLSRALDFFEVAWKIDPSDAEIY 126 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + L+A L + + KL ++ A+I L K +A IL Sbjct: 127 QKLGLVAWKLNMLEAAEKFYRLQY-----KLAPAAVDAAINLGGVLRDAGKFEEAIEILR 181 Query: 285 KIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIA--- 335 + H + ++ + E + L + + + ++ I Sbjct: 182 TA--IYAHQDDYELWNSMGTVLSDKGEPEEARTFYLEAL-RLKPDYGRAHNNMANIHELL 238 Query: 336 ----LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 L + D+A AM+ A +A + W Sbjct: 239 GQPLLALPHYDEALKDPADAMEEA-TMRHGRSMALLSAG-----RLAEGWAA 284 >gi|83815162|ref|YP_445705.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83756556|gb|ABC44669.1| Tetratricopeptide repeat family [Salinibacter ruber DSM 13855] Length = 1064 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 18/214 (8%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +A +A AP + + + + L++ ++ R R Sbjct: 110 DAATAFATFRQAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTAR 169 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNS----IMASICAAKSLISQNKKRKAEVILE 284 L + D+G+ + ++++ + A ++ +Q A + Sbjct: 170 L-GLAQYYLDQGNPDRAKSQ-LQTIATAPSRPDEGAQALYLLGRTEQNQGNPNAALPYFK 227 Query: 285 KIWKVNPHPEI--ANIYTHLLSENTVGKLKR----ALRLEEINKESVESLVI---VSKIA 335 +++ P+ E+ A +Y +++ + + R RL E +S S + + ++ Sbjct: 228 QVYSRYPNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVY 287 Query: 336 LEMGSIDQAHAKAM---LAMKIAPRKEIFLLLAQ 366 +G + A + + + R LL + Sbjct: 288 YRVGQYENAATELQRRLPDLTGSTRARTLFLLGE 321 >gi|91976998|ref|YP_569657.1| tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5] gi|91683454|gb|ABE39756.1| Tetratricopeptide TPR_2 [Rhodopseudomonas palustris BisB5] Length = 784 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 8/146 (5%) Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 P R L + G + A+ AL SP + Y Sbjct: 592 ADRPEARSALGRFL----LQRGQVTEAETEYKAALRFSPAYAPAAVNLADLYRQGGREPE 647 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + L A A L L + + ++ +L + + Sbjct: 648 GESVLRTALIAAP----RDAELHHVLGLTLVRLKRYDEAIAELRQATELEPDRARFAYVY 703 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH 292 A +L S + A IL++I +PH Sbjct: 704 AVALHSAGRMADAISILKQIAARHPH 729 Score = 43.4 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 17/170 (10%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 S A F+ ++ NA A+ +G + + + +L+ A++ Sbjct: 579 SAAEEFVAAQRLNADRPEARSAL-----GRFLLQRGQVTEAETEYKAALRFSPAYAPAAV 633 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRL 317 A ++ + E +L P + H + T+ +LKR + Sbjct: 634 NLADLYRQGGREPEGESVLRTALIAAPR----DAELHHVLGLTLVRLKRYDEAIAELRQA 689 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 E+ + + + G + A + P ++A I Sbjct: 690 TELEPDRARFAYVYAVALHSAGRMADAISILKQIAARHPHDRD-TMMAVI 738 >gi|313497134|gb|ADR58500.1| Response regulator/TPR domain-containing protein [Pseudomonas putida BIRD-1] Length = 577 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 21/174 (12%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDIS 184 Q A A+ Y A + +M +Y E GD AQ +A+ +S Sbjct: 253 RGQNAQAQGVYEQALKAFPIMP--------GLYDGMAEVLVAQGDTRRAQNLLEEAVRLS 304 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA--------ILLIARSLEN 236 P + + + + +++ A + A L+ + Sbjct: 305 PLSVRRQSTLGKLALENEDFESASKAFRHAVNQGQSSRYKDAENNLGLVQALMSKNAGFG 364 Query: 237 ADKGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKI 286 D + E K + A + A SL A + E+ Sbjct: 365 LDARTRVEINTTLSEVAKENPEDQGLQVRARMMKAASLQQAGDPETAGKLTEQA 418 >gi|294085271|ref|YP_003552031.1| tetratricopeptide repeat family protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664846|gb|ADE39947.1| Tetratricopeptide TPR_2 [Candidatus Puniceispirillum marinum IMCC1322] Length = 560 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 91/260 (35%), Gaps = 28/260 (10%) Query: 123 YLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 Y+L QI A + A E L + P + L + G++ A+ + +AL Sbjct: 176 YILRGQIYAALKDNERALETLNHAITIEPENDFALMR-LGVINYNAGNVEQAEYHLDEAL 234 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 I+ ++ W +E+ ++ ++ ++ A + + A K D Sbjct: 235 SINSNSKWALLWKGVIASDGREFEKSKRHFSEALDIDPRFD--MAHYNLGWAYLGAKKKD 292 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVI---LEKIWKVNP 291 + ++L L + A QN+ KA I WK Sbjct: 293 YENAEKSFRKALSLNPDFKEAFYGLGMVFGYQNQYSVSKEYLSKAIDIDDRFFTAWK--- 349 Query: 292 HPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + ++++ L IN + + + ++++L+ + D++ Sbjct: 350 -------WRGIVNDELGLYDQALTDFSSAISINPSNSDIYMRRARVSLKTEAYDESLVDL 402 Query: 349 MLAMKIAP-RKEIFLLLAQI 367 +LA K P I+L L Q+ Sbjct: 403 LLAKKYNPKNARIYLYLGQL 422 >gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 600 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 41/148 (27%), Gaps = 8/148 (5%) Query: 134 RQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A + + P L +GD A +A+ I+PD Sbjct: 427 GDDQGALADYNQAIQINPDLAAAYNNRGLAR--SDLGDYQEAIADFNQAIKINPDDADAY 484 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ AI Q K A R +D GD + D + Sbjct: 485 YNRGNARSNLGDYQGAIADFTQAIKINP----GDADAYYNRGNARSDLGDYQGAIADYNQ 540 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKA 279 ++KL + A + K KA Sbjct: 541 AIKLNPDYAAAYGNRGLAYRDLGDKPKA 568 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 86/298 (28%), Gaps = 17/298 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148 GL + A + + ++ Y Y A + + Sbjct: 147 RGLARSNLGDYEEA--IADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKI 204 Query: 149 IPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P + + D A T+A+ ++PD +++ A Sbjct: 205 NPDYADAYNNRG--NARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGA 262 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I NQ + ++ A R + +D D + D +++++ + A Sbjct: 263 IADFNQAIQINPDF----AYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRG 318 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINK 322 + + A + ++N P+ A Y + + + ++N Sbjct: 319 NARSDLGDDQGAIADFNQAIQLN--PDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNP 376 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + + ++G A A A++I P + ++N + L Sbjct: 377 DDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALA 434 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 11/195 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A +A+ ++PD + AI NQ + + A Sbjct: 359 GDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDL----AA 414 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 R L ++ GD + D +++++ + A + ++A + Sbjct: 415 AYNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAI 474 Query: 288 KVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K+N P+ A+ Y + G + + +IN ++ ++G Sbjct: 475 KIN--PDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQ 532 Query: 343 QAHAKAMLAMKIAPR 357 A A A+K+ P Sbjct: 533 GAIADYNQAIKLNPD 547 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 11/199 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 GD A +AL +SP+ V Y + + AI NQ K ++ Sbjct: 49 KAEKGDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINPDY-- 106 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 AI R L ++ GD + D ++++L + A + L N E I Sbjct: 107 --AIAYYNRGLARSNLGDYQGAIADYTQAIQLNPD--DAIAYNNRGLARSNLGDYEEAIA 162 Query: 284 EKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + +P+ A Y + G + + +IN + ++ + Sbjct: 163 DFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNL 222 Query: 339 GSIDQAHAKAMLAMKIAPR 357 A A A+++ P Sbjct: 223 EDYQGAIADYTQAIQLNPD 241 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 77/262 (29%), Gaps = 45/262 (17%) Query: 135 QYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y A L + ++ + D A +A+ I+PD + Sbjct: 224 DYQGAIADYTQAIQLNPDDAKAYSNRGAAR--SDLEDYQGAIADFNQAIQINPDFAYAYN 281 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 +++ AI NQ + ++ A R +D GD + D ++ Sbjct: 282 NRGVARSDLEDYQGAIADFNQAIQINPDY----ANAYYNRGNARSDLGDDQGAIADFNQA 337 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------------------- 291 ++L + A + + +A + ++NP Sbjct: 338 IQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQG 397 Query: 292 -----------HPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +P++A Y + G L + +IN + + Sbjct: 398 AIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLAR 457 Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357 ++G +A A A+KI P Sbjct: 458 SDLGDYQEAIADFNQAIKINPD 479 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%) Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 Y A +Q+ A L +GD A +A+ I+PD Sbjct: 359 GDYEEAIADFAQAIQLNPDDATAYYNRGLAR--SDLGDDQGAIADYNQAIQINPDLAAAY 416 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + A+ NQ + + A R L +D GD + D + Sbjct: 417 NNRGLARSNLGDDQGALADYNQAIQINPDL----AAAYNNRGLARSDLGDYQEAIADFNQ 472 Query: 252 SLKLCDNSIMASICAAKSLISQNKKR 277 ++K+ + A + ++ R Sbjct: 473 AIKINPD-------DADAYYNRGNAR 491 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 4/122 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A ++I A Y+ +GD A T+A+ I+P Sbjct: 461 GDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYN 520 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 ++ AI NQ K ++ A R L D GD + D ++ Sbjct: 521 RGNARSDLGDYQGAIADYNQAIKLNPDY----AAAYGNRGLAYRDLGDKPKALEDFRQAA 576 Query: 254 KL 255 L Sbjct: 577 TL 578 >gi|162448875|ref|YP_001611242.1| hypothetical protein sce0605 [Sorangium cellulosum 'So ce 56'] gi|161159457|emb|CAN90762.1| Hypothetical protein sce0605 [Sorangium cellulosum 'So ce 56'] Length = 1450 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 15/243 (6%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 +L +I LA R A + + + +Y L GD A+ A AL+ Sbjct: 804 VLAAEIELAARDAPKAIAAWQHASGLQKSART-LYGLARAQILAGDTAGAEASARGALEA 862 Query: 184 SPDAPWVTEAVVQQYVLA-KEWSRAITFLNQ------KKKNAKEWNRNRAILLIARSLEN 236 SPD + A+ L + + A + A L+ + Sbjct: 863 SPDHVGARTLIASLLWQTPGREQEALDLLGKVTGEGPTRAAASDPEIVDAYTLLGT--IH 920 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + M A+ ++KL ++ A I + L + +A+ E + + +A Sbjct: 921 LARSRMSAAEQAFAAAVKLDPQAVRALIGNGEVLYRSGRYSEAQARFEAAARAD-ARSLA 979 Query: 297 NIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + ++K A L++ + + + + + L +G+ A + A+ Sbjct: 980 AQLGKAKTWLAQERMKEAKDLLKELQKTHAAAPQVAYWLGRTELALGNKKDAEQAYLDAV 1039 Query: 353 KIA 355 K Sbjct: 1040 KST 1042 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 33/221 (14%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----------KN 217 G +A ++A PD P + +A + + + A L K Sbjct: 1063 GRNEAAAEKLSEATAKFPDLPALHKAKAEVALQTGRYDEARQELELALAKEDDLGSQFKL 1122 Query: 218 AKEWNRNRAI-------------------LLIARSLENADKGDMIASYHDAIESLKLCDN 258 + R R L + R L + G + ++L+ N Sbjct: 1123 GVAYRRLRRFEDAAKVFDKVTAADKDYPGLALERGLLFEETGQSERALEMYADALRKAPN 1182 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRA 314 I + + + +AE IL ++ K + AN + + N L+ Sbjct: 1183 DIDLKLRVGSTQVMAGHASQAEPILREVLKDRANSAEANHFLGRALLVRGTNMAEALRFL 1242 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 R E++ E + V A E +A A+++ Sbjct: 1243 ERAAELDPNRAEYHLYVGWGANETAQTARAEMALRRALELD 1283 >gi|144900214|emb|CAM77078.1| Fe-S oxidoreductase [Magnetospirillum gryphiswaldense MSR-1] Length = 437 Score = 44.2 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 10/106 (9%) Query: 188 PWVTEAVVQQY--VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P +++A+ + ++ A L Q R AIL+ ++ + Sbjct: 12 PEISQALARAQTLAAGQKLDEAEKLLAQYPHVPDCVFRRAAILMT------LERWAEAEA 65 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A+ LKL + +++ A +LI QN+ ++A +LE +K P Sbjct: 66 GFRAL--LKLAPSHFDSAMGLAGALIEQNRAKEAIPLLEAAYKAQP 109 >gi|262304985|gb|ACY45085.1| acetylglucosaminyl-transferase [Ephemerella inconstans] Length = 289 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + H + L L I + A L + A Sbjct: 34 GQVTEAEECYNTALRLCPTHADSLNNL--ANIKREQGYIEDATRLYLKALDVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 92 SNLASVLQQQGKLNEALLHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G + + H +LKL + A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGSIPEAIHSYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.4 bits (101), Expect = 0.088, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVTEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L + A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEDATRLYLKALDVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + GSI +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGSIPEAIHSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|220918547|ref|YP_002493851.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956401|gb|ACL66785.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 4104 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R GD SA +AL++ P + A ++ A+ L + A + Sbjct: 360 RFGDAESALAALRRALELDPACEPAALQAFEHETDAGRFAEALDVLERHLAAAPAKPAHA 419 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + A ++ GD + +L+ A+ A L + + +LE Sbjct: 420 PLRVRAAAIAREKLGDAGRARRHLEAALRADPGHAPAAAALAPLLAEAGEWQPLARVLE 478 Score = 43.4 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 8/235 (3%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATR 153 +A A V E LV L++ A A+ + A + M ++ R Sbjct: 2110 LAHGEPARAAAAWQKVLDLAPDDREALVGLIDALEAGADPEALAQALRRGLAMEELAEGR 2169 Query: 154 EFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + L + R+GD A + + L++SPD + + V A+ W L Sbjct: 2170 AHLLRRLAAVQDERLGDAAGAIQSLKRLLELSPDDREALGRLDRLCVKAERWVDLGDVLA 2229 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAAKS 269 ++ A E + + + L + D + E L+ + A Sbjct: 2230 REIAAAAEAGDANVLGAVRQRLAELKENRLLDREGALELYEEVLRARPDHPEALARLEAM 2289 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTVGKLKRALRLEEIN 321 L +A V LE+ + P + + + L L E+ Sbjct: 2290 LQKDPGNARAAVALERAYAAAGDPLRQAAVLEQRAGERPDPQERKALYLALAELR 2344 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 1/131 (0%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ + L + P P A+V+ +W+ L ++ + A+ L Sbjct: 78 AEDLYRQLLQLEPAHPVALRALVELLEERGDWAGVAAALEREATATADRAAAAAVTLRLG 137 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ G + + +L + A A + + + +A+ +L+ Sbjct: 138 KVQEERLGRRDRAALLYARAHRLDPSLEEARARAMECFGALRRFAQAKRLLDGARDAGAD 197 Query: 293 P-EIANIYTHL 302 P +A Y L Sbjct: 198 PRALAAEYARL 208 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 2/124 (1%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 D SA RY +AL +P + YV W+ A L+ Sbjct: 3352 EERDDRESAARYYEEALKRTPGHLDAARPLSDIYVAQARWADAERVLDVIVGVLDAGGDA 3411 Query: 225 RAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R + + G M + + +L + A L+ + + +A I Sbjct: 3412 RELCRQCYRQGYVAEKLGRMDKALASYRRAYELDATYLPALEGLGNLLVRREEWDEALRI 3471 Query: 283 LEKI 286 + Sbjct: 3472 FTAV 3475 >gi|72382664|ref|YP_292019.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A] gi|72002514|gb|AAZ58316.1| TPR repeat [Prochlorococcus marinus str. NATL2A] Length = 739 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 74/197 (37%), Gaps = 11/197 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G+L A+ Y KA+ I+P+ + + A + + + Sbjct: 113 RDLGNLQDAELYTRKAIKINPNYALAYSNLGNVLKDLGKSQDAELSYRKAIQINPNY--- 169 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + + G++ + +++++ N A L + + AE+ Sbjct: 170 -ADAHYNLGIILKELGNLQDAELSYRKAIQINPNYADAYSNLGNVLKDLDNLQDAELSYR 228 Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K ++N P+ A+ Y++L + N + +IN + E+ + + ++G Sbjct: 229 KAIQIN--PDHADAYSNLGNVLKDLGNLQDAELSYRKAIQINPDHAEAHFNLGNLLKDLG 286 Query: 340 SIDQAHAKAMLAMKIAP 356 + +A +++I P Sbjct: 287 KLQEAKKVLKKSIEIEP 303 >gi|15676768|ref|NP_273913.1| hypothetical protein NMB0872 [Neisseria meningitidis MC58] gi|7226109|gb|AAF41283.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|316985766|gb|EFV64710.1| tetratricopeptide repeat family protein [Neisseria meningitidis H44/76] gi|325133989|gb|EGC56644.1| tetratricopeptide repeat protein [Neisseria meningitidis M13399] gi|325142081|gb|EGC64507.1| tetratricopeptide repeat protein [Neisseria meningitidis 961-5945] gi|325144095|gb|EGC66402.1| tetratricopeptide repeat protein [Neisseria meningitidis M01-240013] gi|325200443|gb|ADY95898.1| tetratricopeptide repeat protein [Neisseria meningitidis H44/76] Length = 614 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 72 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 358 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 359 YAKVRQWLKK-VSAP 372 >gi|330922900|ref|XP_003300018.1| hypothetical protein PTT_11155 [Pyrenophora teres f. teres 0-1] gi|311326033|gb|EFQ91876.1| hypothetical protein PTT_11155 [Pyrenophora teres f. teres 0-1] Length = 1323 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 12/162 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + Y A + +M L+I + L C++ D K + P A Sbjct: 91 KNYPEAIKSYKMALRIEPNSLNILRDLALLQCQVRDYEGYIESRRKMMQERPQLRQNWTA 150 Query: 194 VVQQYVLAKEWSRA---ITFLNQKKKN---AKEWNRNRAILLIARSLENADKGDMIASYH 247 + Y L+ ++ A + + K + + A L ++ + GD+ + Sbjct: 151 LAVAYHLSGNYAEAENILKTYEETLKRPPPKTDLEHSEATL--YKNQIIYESGDVERALK 208 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 E ++ + A AK L+ +K +A EK ++V Sbjct: 209 HLEEVVRDSLDRGAALELKAKYLLELGRKEEA----EKAYRV 246 >gi|295670772|ref|XP_002795933.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01] gi|226284066|gb|EEH39632.1| DnaJ domain-containing protein [Paracoccidioides brasiliensis Pb01] Length = 746 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT------EAVVQQYVL- 200 Q P Y + G+ A ++ AL + PD+ + +++ Sbjct: 433 QDPDALFLRGRLFYVQ----GENEQAIKHFKLALSLDPDSSQAVKYLRMVQKLLRMKDEG 488 Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++++ +AI ++ + + + LL R+ + + S D ++L+L Sbjct: 489 NAAYKSRKYQQAIDIYSKALEIDPKNKNINSKLLQNRAQSYLNLNNYEKSIEDCTKALEL 548 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + A AK+ +A L+KI + NP Sbjct: 549 DPLYVKAQRVRAKAYGGAGNWEEAVQDLKKISEANP 584 >gi|195490356|ref|XP_002093105.1| GE21142 [Drosophila yakuba] gi|194179206|gb|EDW92817.1| GE21142 [Drosophila yakuba] Length = 1148 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + A I K + + A+I Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 453 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D + Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A+ LE Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESA--------------- 477 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A + + + ES ++++ M S D A +K P Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528 >gi|4468812|emb|CAB38213.1| putative protein [Arabidopsis thaliana] gi|7270728|emb|CAB80411.1| putative protein [Arabidopsis thaliana] Length = 1013 Score = 44.2 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 17/211 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146 L G+ + N A + V ++ + E L+ +R+ A + + Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIG--RGTAYAFQRELESAIADFTKAI 358 Query: 147 LQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 PA E + G+ A TKAL P++P V +K+++ Sbjct: 359 QSNPAASEAWKRRGQARAAL--GEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFT 416 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ L+ K K+ L +A + G+ + ++S++L N + A + Sbjct: 417 AAVKDLSICLKQEKDNKSAYTYLGLAFASL----GEYKKAEEAHLKSIQLDSNYLEAWLH 472 Query: 266 AAKSLISQNKKRKAEVILEK-------IWKV 289 A+ KA +E+ +WK Sbjct: 473 LAQFYQELADHCKALECIEQVLQVDNRVWKA 503 >gi|332880222|ref|ZP_08447903.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681871|gb|EGJ54787.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 491 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 60/279 (21%) Query: 141 EKLEMMLQIPATREFAVYSLYFES----------CRIGDLNSAQRYATKALDISPDAPWV 190 E MLQ S+Y E+ D + A AL+I P + Sbjct: 19 ALYEQMLQ-------GGQSVYLEADELTDIAEYYLVQNDTDKAMACIQYALNIHPGSIDP 71 Query: 191 TEAVVQQYVLAKEWSRA---------------------ITFLNQKKKNAKEWNRNR---- 225 + +Q + + A + K++ A + + Sbjct: 72 LIFLARQKMFNGDIEGAKTIRDCITDPNDREVIFLNAELLLREGKEQEATTYLSEKAETE 131 Query: 226 ----AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A+ + D G + + +L + ++ A LIS N+ ++A Sbjct: 132 EEDAALFAYDTATLFLDYGYLEQAAQWGQRALDMEPDNEKFLKLKADHLISSNRPKEAIE 191 Query: 282 ILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 IL + +NP H + Y + E+ ++ A I++ ++L++ + Sbjct: 192 ILNSLLDINPYNLNAWH-SLGEAYF--VCEDFSKTMETADFALAIDEHDAQALLLKANSL 248 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLL-----LAQIEQ 369 L+ ++D+AH + K P EI L L+ +E+ Sbjct: 249 LQQQNLDEAHQLYLRYFKEHPSNEIPYLFDGVCLSALER 287 >gi|304387813|ref|ZP_07369987.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC 13091] gi|304338078|gb|EFM04214.1| tetratricopeptide repeat protein [Neisseria meningitidis ATCC 13091] Length = 616 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 74 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 133 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 186 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 187 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 244 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 245 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 304 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 305 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMIYADRRD 360 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 361 YAKVRQWLKK-VSAP 374 >gi|292489049|ref|YP_003531936.1| hypothetical protein EAMY_2581 [Erwinia amylovora CFBP1430] gi|292900178|ref|YP_003539547.1| fimbrial assembly protein [Erwinia amylovora ATCC 49946] gi|291200026|emb|CBJ47151.1| putative TPR repeat protein (putative fimbrial assembly protein) [Erwinia amylovora ATCC 49946] gi|291554483|emb|CBA22013.1| Uncharacterized protein HI0366 precursor [Erwinia amylovora CFBP1430] Length = 243 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 56/163 (34%), Gaps = 5/163 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L+ + A L+ L ++ + GD + A+++ +AL +P Sbjct: 36 AYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQHYHRALAQAPQNG 95 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +V ++ A + ++++ R ++ + G + Sbjct: 96 YVLNNYGAFLCGLGQYDAAQRQFSLAREDSVSGLRADSVENSGYC--FLNAGQPDKARKA 153 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290 +++++ A++ K R++ +L +++ N Sbjct: 154 LVDAVQTDP--AKGLPMLAEAERRLGKGRRSESRLLLDVYQHN 194 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 28/167 (16%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R I L G+M A+ + +L + A+ + +AE Sbjct: 23 RHVRVETRIQLGLAYLSNGNMDAARRNLQRALSQAPGDYRVQLAMARYQQQTGDRSRAEQ 82 Query: 282 ILEKIWKVNPHPEIANI----YT---------HLLSENTVGK---LKRALRLEEINKESV 325 + H +A Y L + + L R + + +SV Sbjct: 83 --------HYHRALAQAPQNGYVLNNYGAFLCGLGQYDAAQRQFSLAREDSVSGLRADSV 134 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 E+ L G D+A + A++ P + +LA+ E+ Sbjct: 135 ENS---GYCFLNAGQPDKARKALVDAVQTDP-AKGLPMLAEAERRLG 177 >gi|254295375|ref|YP_003061398.1| hypothetical protein Hbal_3033 [Hirschia baltica ATCC 49814] gi|254043906|gb|ACT60701.1| Tetratricopeptide TPR_2 repeat protein [Hirschia baltica ATCC 49814] Length = 609 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 5/171 (2%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ + + ++ D +Y ++ KL + A A L + A+ + Sbjct: 10 LLHQGMSLYNQKDYRRAYDVFSKAKKLAPQNFDAVYLLAVCLNQLGRLEDAKKQFLNAIQ 69 Query: 289 VNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 +NP H E N ++LS +K + + N + + + +++ + G +A Sbjct: 70 LNPSHAEAINTLGNVLSKQGKLFSAIKMYRKSVKANVNYLPAFLNLAQKLIVAGQHAEAQ 129 Query: 346 AKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395 ++ P + L+ +A + D L + A P+ +I Sbjct: 130 QYLRRILEAEPNNTLALIAMADAYLGCNQFED-ALEYLLRAQAISPENAYI 179 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 17/202 (8%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 LY + D A +KA ++P + A ++ NA Sbjct: 17 LYNQK----DYRRAYDVFSKAKKLAPQNFDAVYLLAVCLNQLGRLEDA----KKQFLNAI 68 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + N + A + + +G + ++ +S+K N + A + A+ LI + +A Sbjct: 69 QLNPSHAEAINTLGNVLSKQGKLFSAIKMYRKSVKANVNYLPAFLNLAQKLIVAGQHAEA 128 Query: 280 EVILEKIWKVNPHPEI-----ANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSK 333 + L +I + P+ + A+ Y E+ + L RA I+ E+ + Sbjct: 129 QQYLRRILEAEPNNTLALIAMADAYLGCNQFEDALEYLLRAQ---AISPENAYIEFRFIQ 185 Query: 334 IALEMGSIDQAHAKAMLAMKIA 355 I L D+ K Sbjct: 186 ICLSRCEFDEVEKNLSAYEKKH 207 >gi|163854538|ref|YP_001628836.1| hypothetical protein Bpet0234 [Bordetella petrii DSM 12804] gi|163258266|emb|CAP40565.1| partial homologue to genes conserved in polysaccharide synthesis clusters [Bordetella petrii] Length = 826 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 79/236 (33%), Gaps = 44/236 (18%) Query: 125 LEVQIALAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ + AL Y + ++ + P + + +GD +A ++ +A Sbjct: 582 LDARAALLAGNYKEVIDLTDIAIDTHVDFPELDT--MRG--RAADALGDKKTAMQHLERA 637 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 S AP T+ + W + + + +L + ++A Sbjct: 638 -ATSESAPLSTQLYFARVAFNGGWFG------------EAIDAYKMVLAHTSADQSAKD- 683 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------- 292 E+ + +I A+ ++S + A +LE++ K P Sbjct: 684 ----------EAQRQLGRLGPRAIRGAREILSAGDHQAAWNLLERVAKSWPQMAEIDHEK 733 Query: 293 -PEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +A +Y +T +L R+ ++ + L + + A+ + +QA Sbjct: 734 RRVLAVLYAEARTLDPSSTTERLALGERILKLVSDDPVGLRLAAVGAMRLHRFEQA 789 >gi|124007785|ref|ZP_01692487.1| TPR repeat [Microscilla marina ATCC 23134] gi|123986731|gb|EAY26512.1| TPR repeat [Microscilla marina ATCC 23134] Length = 400 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 88/253 (34%), Gaps = 17/253 (6%) Query: 127 VQIALAERQYNIAHEKLEMMLQI--PATREFAVYS---LYFESC--RIGDLNSAQRYATK 179 + ++ + + AT+ S LY + + +A + T+ Sbjct: 72 ADAYFERGKTHMLQKHYKKAFNDFVKATQFNPRKSAPYLYKGAIYHEQNEYEAAIQEYTQ 131 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL ++P + + Y +AI +A ++ +AIL R + Sbjct: 132 ALRLNPKSAMAYNYRAEAYKEIGFTPKAIE----DYSSAINYDPQQAILYYGRGQCLMES 187 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVI--LEK--IWKVNPHPE 294 + D ++++L + + + A + R A+ + LE+ + P+ Sbjct: 188 QKYTQAIKDFSKAIQLQPSILDSYRQRAYAAFLAGNYMRSAQDLDYLEQKDAKNMKPYQY 247 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + Y S++ G ++ ++ E+ + V ++ + D A A++ Sbjct: 248 SLSAYCKAASKDYRGAIRAINKVMELEPNNALHYVERAQYHAALAQYDPAINDYTKALEA 307 Query: 355 APRK-EIFLLLAQ 366 P + L A+ Sbjct: 308 YPDSVRFYGLRAE 320 >gi|317504147|ref|ZP_07962146.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315664723|gb|EFV04391.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 593 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 8/165 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ +A A + + A+ L+ ++ P E Y FES + D + A Y KA Sbjct: 55 TMFLDAILAEAAGKNDSAYSLLQKCIKLNPDAAEAYYYLASFESEKKND-SLALSYLIKA 113 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADK 239 +SPD E + + Y+ A+++++AI K++ + + +L + + D Sbjct: 114 HALSPDNEDYQEQLAENYINAQQYAKAIDVYEALVKRHGDRSDVLQVLLQLYN--QQKDY 171 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +M+ + ++ + ++ + + K++A L+ Sbjct: 172 DNMLRTIERLEQNEGNSEG---ITLSKVRVYELKGDKKQAYKALQ 213 >gi|261392775|emb|CAX50351.1| conserved hypothetical TPR-containing periplasmic protein [Neisseria meningitidis 8013] gi|325198073|gb|ADY93529.1| tetratricopeptide repeat protein [Neisseria meningitidis G2136] Length = 614 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 72 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 358 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 359 YTKVRQWLKK-VSAP 372 >gi|254670383|emb|CBA05888.1| TPR domain protein [Neisseria meningitidis alpha153] Length = 614 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 72 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 358 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 359 YTKVRQWLKK-VSAP 372 >gi|149923553|ref|ZP_01911953.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] gi|149815572|gb|EDM75104.1| tetratricopeptide repeat protein [Plesiocystis pacifica SIR-1] Length = 1232 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 17/205 (8%) Query: 135 QYNIAHEKLEM---MLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWV 190 + + + + + P R A++ L +GD+ A LDI P Sbjct: 377 NWEALRDVYQRKTELAETPEDRRAALHVLGQVHDRELGDVERAIDTYQAILDIDPMDYVA 436 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 +A+ + + A+ W + L Q + A A+ +L D + + Sbjct: 437 IQALDRLFGQAERWHEQLQILEQAVEVADRHEEQTALRHRIGALWEGQLADPVRAVESYR 496 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILE------KIWKVNPHPEIANIYTHLLS 304 E L + + + A +LE W+ + ++Y ++ Sbjct: 497 EVLAHDPSHEPTIEALDRIAHGDTQPMMAAEVLEPFYEQLAEWEK-----LIDLY-EVMV 550 Query: 305 ENTVGKLKRALRLEEINKESVESLV 329 E+T + + RL +I ++ E + Sbjct: 551 EHTEDPIAKIERLHKIA-DTYERQL 574 >gi|331682769|ref|ZP_08383388.1| putative heat shock protein [Escherichia coli H299] gi|331080400|gb|EGI51579.1| putative heat shock protein [Escherichia coli H299] Length = 389 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 62/281 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMALLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA ++++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESMQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361 + L + I +A + A ++ P +F Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318 >gi|300716934|ref|YP_003741737.1| hypothetical protein [Erwinia billingiae Eb661] gi|299062770|emb|CAX59890.1| Conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 389 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 17/165 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A + D Sbjct: 83 GEVDRAIRIHQALMESASLTYDQRLLAVQQLGRDYMAAGFYDR----AEEMFSQLVDETD 138 Query: 190 ----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIA 244 + ++ + +W +AI + K K+ R A +L+ D+ Sbjct: 139 FRVGALQQLLIIHQATSDWPKAIEVAERLVKLGKDKQRMEIAHFYCELALQAMGSDDLDR 198 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK 285 + + S SI + +++ + KA + +LE+ Sbjct: 199 AMGLLRKGESADRQSARVSIMMGRIHMAKGEYAKAVGHLQRVLEQ 243 >gi|256391357|ref|YP_003112921.1| serine/threonine protein kinase [Catenulispora acidiphila DSM 44928] gi|256357583|gb|ACU71080.1| serine/threonine protein kinase [Catenulispora acidiphila DSM 44928] Length = 765 Score = 44.2 bits (103), Expect = 0.052, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 12/119 (10%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+ +A+ I A +M + V E L A + A M+ Sbjct: 551 RGLIQLASGVITQAARMFTAV--YDALPGEPAPKLALGACAELLGDFETASRYYG-MVWR 607 Query: 150 PATREF-AVYSLYFESCRIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVLAKE 203 T A + L G ++A +A P EA ++ ++ ++ Sbjct: 608 TDTGYVSAAFGLARALLNTGRRDAAV----RAFGAVPQTSTHHTAANEAALRALLVDRD 662 >gi|332017474|gb|EGI58197.1| Intraflagellar transport protein 172-like protein [Acromyrmex echinatior] Length = 1733 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 83/320 (25%), Gaps = 67/320 (20%) Query: 93 MSIAAHNIPLARKMHSY------VSQQHTFHNEYLVY---LLEVQIALAE-RQYNIAHEK 142 + I + + A ++ +Q H E L L + ++ A Sbjct: 951 IHIQSGDWMRAHQVAQEHMKSEEANQVLAKHAESLQQNGELRHAESLYVAIGDHDAAIAM 1010 Query: 143 LEMMLQIPAT-REFAVYSLYFESCRIGD--LNSAQRYATKALDISPDAPWVTEAVVQQYV 199 R + D + Q A + LD + E + Sbjct: 1011 YRKAGNRSDMVRLV--------AQHRPDLLQTTHQHLARE-LDAASKPREAEEHFLG--- 1058 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCD 257 A +W A R+ + +L A K + + + L Sbjct: 1059 -AGDWRGA-------------VTAYRSANMWEDALRVAKKASGEKAAQQVALMWARTLAP 1104 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL 317 A+ L+ E L+ + N + + + +TV + K Sbjct: 1105 EL------GARLLMRLG---YLESCLQLACEAN----LFDWALEIAKYSTVDQKKEVHYR 1151 Query: 318 EEINKESVESLVIVSKIA-LEMGSIDQA---------HAKAMLAMKIAPRKEIFLLLAQ- 366 + E E + ++ ++ G +A A + ++ + +L Sbjct: 1152 YAMALED-EGRFVEAEKEFVQAGKTMEAVQMYIHTRDWESAEDVARSHSQEAVAQVLIAR 1210 Query: 367 -IEQANSHNTDKILYWTQSA 385 E A + A Sbjct: 1211 AAEAAEGQDYATAEALLLRA 1230 Score = 38.4 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 84/239 (35%), Gaps = 49/239 (20%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E+ D +A+ +A E +++ Y A WS A+ + + + Sbjct: 1213 EAAEGQDYATAEALLLRAHK--------PEIIIEHYKTAGMWSEALRVCREYLPSQEAAL 1264 Query: 223 RNR-----AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNK 275 R A L A +LE A K + A+++L L S AA L+ Q Sbjct: 1265 RRELGQRSAGLDGANALEEARKWLNLGEVRPALDTLILNPQ-APRSYLIRAADILLHQAD 1323 Query: 276 KRKAEVI----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 A I E+++ V H A ++ +LK ++V SLV V Sbjct: 1324 PETAAEIGGNLGERLFSVGEHALAAQVFLQ------ADRLK----------DAVSSLVTV 1367 Query: 332 SKIALEMGSIDQAHAK-AMLAMKIAPR--KEIFLLLA---QIEQANSHNTDKILYWTQS 384 G D+A LA + P ++ +A +IE+ +++ L Sbjct: 1368 -------GEWDRARRIVRELAPDLEPYLEEKYQDAMANEGEIERLAEVDSNAALEVMAR 1419 >gi|237654280|ref|YP_002890594.1| hypothetical protein Tmz1t_3624 [Thauera sp. MZ1T] gi|237625527|gb|ACR02217.1| Tetratricopeptide TPR_2 repeat protein [Thauera sp. MZ1T] Length = 571 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 4/158 (2%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 IAR+ D + + +L+L A + + L +A +LE Sbjct: 187 AHIARAQAAQAVEDRMGALAAVDRALELRSGWEPAVLLKVQILQQAGAHTEALRVLEAEA 246 Query: 288 KVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P +A + ++ +L E + + E L V +++++ A Sbjct: 247 ARAPASRSLRLAKARALVSAQRFGEARAAFNQLLEASPQDPELLYAVGLLSMQLEDFAAA 306 Query: 345 HAK-AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 A P+ ++ L A+ ++ W Sbjct: 307 ELHFARALAAEHPQPDLIRLHLGQIAADRGEGERARKW 344 >gi|254523006|ref|ZP_05135061.1| TPR repeat protein [Stenotrophomonas sp. SKA14] gi|219720597|gb|EED39122.1| TPR repeat protein [Stenotrophomonas sp. SKA14] Length = 293 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 6/151 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A H +Q L LL+ Q + A + P + L Sbjct: 62 ASLAHVDAFRQRYGDRPAL-RLLQADALRETGQADAAIALYRELSTGPQAAAA-AHGLGL 119 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + D +++ +A + P + + A ++ +A L + + + Sbjct: 120 IAAHRDDDAGSEQSLARATQLEPLNTDYLGDLGYARLRAGQFDQAREPLAKALELSPGNA 179 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESL 253 + A L +L +GD + A ++ Sbjct: 180 KATANL----ALWAVLRGDTATAERLAQQAN 206 >gi|83311940|ref|YP_422204.1| O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] gi|82946781|dbj|BAE51645.1| Predicted O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] Length = 728 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 88/256 (34%), Gaps = 15/256 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+ ++ A + ++ + E YL L+ + + A E L +++ Sbjct: 11 QGIGALQQGKWDEAARQFRTLTGRTPNAPEPFYYL--GVALLSGGKPDEAAETLTRLIRK 68 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A+ +L G A++ + L ++PD E + + + ++ + A+ Sbjct: 69 HGDNPMALNALGSAQAASGKTGPAEKSFKRVLALAPDLSDAAENLARLLIESQRAAEALA 128 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L E R + L+ R+L D G++ + + LK + A Sbjct: 129 PLRSVLSR--EPGRLASRHLLGRAL--RDTGELEGAMAEFQAVLKAQPDFAPALNDLGLL 184 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKE 323 + K A E + +NP +A L E + + + + Sbjct: 185 YFAGGKGEDALACFEHLLALNPADHVAANNRALTLRVLNRPEEAEQQ---YRAILARHPQ 241 Query: 324 SVESLVIVSKIALEMG 339 + E + + K+ MG Sbjct: 242 APEVNLNLGKLLARMG 257 >gi|289192665|ref|YP_003458606.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp. FS406-22] gi|288939115|gb|ADC69870.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp. FS406-22] Length = 323 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 13/191 (6%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA-VYSLY 161 RK V E + +L L E A + + + P + L Sbjct: 3 RKRTPRVDAL-----EAVANVLRAYRELFEGNLIKALYYVDKALELEPDFYLALFLKGLI 57 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G++ A + L P V Q Y ++ A+ ++ E Sbjct: 58 LYAK--GEVKEAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALRCYDKAL--GIEN 113 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A LL LE G+ E L N + + A+ L + A + Sbjct: 114 KFLSAFLLKTICLEFL--GEYDELLKCYDEILSYVPNFVPMWVKKAEILRKLGRYEDALL 171 Query: 282 ILEKIWKVNPH 292 L + ++ PH Sbjct: 172 CLNRALELKPH 182 >gi|194864807|ref|XP_001971117.1| GG14779 [Drosophila erecta] gi|190652900|gb|EDV50143.1| GG14779 [Drosophila erecta] Length = 1150 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + A I K + + A+I Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 453 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D + Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A+ LE Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESA--------------- 477 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A + + + ES ++++ M S D A +K P Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528 >gi|159027096|emb|CAO89281.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 251 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 68/180 (37%), Gaps = 13/180 (7%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 QY ++ ++I L + + R IL + L +A+ E++K+ Sbjct: 62 QYRQQGDFIKSIEALKKSVQLNPNHLDGRVILGWTQHLAK----QPLAAQTTLEETIKIA 117 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLS-ENTVGK 310 + + A + KA V K + P EIA Y L ++ + Sbjct: 118 PDHVAAYNALGIVYLVGGHLEKAVVTHTKAASLKPDNEIAYYNLSLAYHRLKDFDSAITN 177 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 K+A++LE + LV ++ I L+ G +A A + R LA +++A Sbjct: 178 AKKAVKLE---PNNPHPLVALAMIYLDQGDSKKAQDTYKKARDLDGRYREKWFLAHLKEA 234 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 4/115 (3%) Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +AQ + + I+PD A+ Y++ +A+ + + I Sbjct: 105 AAQTTLEETIKIAPDHVAAYNALGIVYLVGGHLEKAVVTHTKAASLKPDNE----IAYYN 160 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 SL D ++ +A +++KL N+ + A + Q +KA+ +K Sbjct: 161 LSLAYHRLKDFDSAITNAKKAVKLEPNNPHPLVALAMIYLDQGDSKKAQDTYKKA 215 >gi|13472730|ref|NP_104297.1| O-linked GlcNAc transferase [Mesorhizobium loti MAFF303099] gi|14023477|dbj|BAB50083.1| O-linked GlcNAc transferase [Mesorhizobium loti MAFF303099] Length = 280 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 8/132 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A + +Q+ T A L ++S G A + A+ ++PDA Sbjct: 147 AGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQ--GQHKFAIEDFSTAISLAPDAAEP 204 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 Y+ + A + N K + A ++L +GD + Sbjct: 205 YNGRGLSYLATGDEDNAFSDFNMAIK----LDGQNAEAWANQALIYERRGDKAKAAKSYK 260 Query: 251 ESLKLCDNSIMA 262 E+++L N A Sbjct: 261 EAVRLNPNYQPA 272 >gi|89094909|ref|ZP_01167841.1| TPR domain protein [Oceanospirillum sp. MED92] gi|89080866|gb|EAR60106.1| TPR domain protein [Oceanospirillum sp. MED92] Length = 564 Score = 44.2 bits (103), Expect = 0.053, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 18/210 (8%) Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 LY E A KAL+ T A+++ ++ Sbjct: 117 EANMLLHQGLYQE---------ALPLVKKALEFD---ALRTLALIRGQANRIN-KDVLSS 163 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K + RA L + +L + +G ++ +L + ++ A I A+ L Sbjct: 164 YVTMLKAFRTEETPRADLELTLALLHKAEGATQSALSAFNRALSIDPDNPEALIQKAELL 223 Query: 271 ISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL--LSENTVGKLKRALRLEEIN-KESVE 326 + A ++E ++ P + ++ +YT L ++ T + +A L + N K+ Sbjct: 224 REDEDIKGALQLIEAAFEQQPENRQLHILYTQLLFQTKQTKKGVTQAEALVQNNLKDHQL 283 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + LE + + A +++ P Sbjct: 284 TYYL-ALLMLENEAPESALKAFNHLLELKP 312 >gi|301092739|ref|XP_002997222.1| mitochondrial import receptor subunit TOM70, putative [Phytophthora infestans T30-4] gi|262111493|gb|EEY69545.1| mitochondrial import receptor subunit TOM70, putative [Phytophthora infestans T30-4] Length = 595 Score = 44.2 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 88/239 (36%), Gaps = 28/239 (11%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----W 221 G+ A++ K+L+ P + + + K+ +A+ + ++ E + Sbjct: 329 RGEFELARKSFEKSLNAKPRSIFAKIRMGGLCFDQKDLKKALEWFDKALAEKSECSTAYF 388 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R + + +++ M A+ +D + + + + MA I + + A Sbjct: 389 HRGQLHSIDVSLDGTSNESSMGAALNDLEKCISIAPDFAMAYIQLGVTHARTGNFQGAVE 448 Query: 282 ILEKIWKVNPH-PE----IANIYTHLL--SENTVGKLKRALRL----EEINKESVESLVI 330 L ++ P PE + Y +L +TV LK + E++ + + Sbjct: 449 YLTTAARITPDVPEIYNYLGETYMQMLQAPGSTVD-LKTVEEMFEEAIELDPSYPMAYIN 507 Query: 331 VSKIALEMG-SID-QAHAKAMLAMKIAPR--------KEIFLLLAQIEQA-NSHNTDKI 378 + ++ G QA A A+++ PR ++++ + + +A + Sbjct: 508 QGNLLVQKGTEYGHQALALFEKAVEMCPRSKFAYCHLAQVYMAMQEYSRAIEQIDKAVA 566 >gi|254470075|ref|ZP_05083479.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062] gi|211960386|gb|EEA95582.1| tetratricopeptide TPR_2 [Pseudovibrio sp. JE062] Length = 605 Score = 44.2 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 22/205 (10%) Query: 134 RQYNIAHEKLEM------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A L M + + Y++ +L A+ + K ++ P Sbjct: 349 GDNERAIAYLSEVSESSPMKREAEIQIALHYNIL------DNLEEARAHLEKLVESDPTD 402 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 ++ + A T +Q E N LL R + + A+ Sbjct: 403 LEAITSLGNVLRGHSLFEEAETSYDQGLSTLNEIQSNHWTLLYFRGITRERQNKWDAAEE 462 Query: 248 DAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPH-----PEIANIYTH 301 D E+L L M SL+ + K +A+ ++E+ ++ P + +Y Sbjct: 463 DFREALTLKPEQPMILNYLGYSLVDRGLKLDEAQKMIERAVRLRPTDGYIVDSLGWVYYR 522 Query: 302 L-LSENTVGKLKRALRLEEINKESV 325 L E V KL+RA + Sbjct: 523 LGRYEEAVEKLERA---VALRPHDP 544 >gi|88810853|ref|ZP_01126110.1| hypothetical protein NB231_17273 [Nitrococcus mobilis Nb-231] gi|88792483|gb|EAR23593.1| hypothetical protein NB231_17273 [Nitrococcus mobilis Nb-231] Length = 564 Score = 44.2 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 44/296 (14%), Positives = 94/296 (31%), Gaps = 45/296 (15%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFES 164 + Q + L +L+ ++A + A + PA E A + + Sbjct: 32 AGADQASEAKADLLYHLMVAELAGSRGDLGRAASDYLAAARLSSDPAVAERATR-IALLA 90 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK---------- 214 R G A A + + P++ + V V E +A+T L Sbjct: 91 KREG---LALAAADRWHGLLPNSLEARQTVGLLSVRRSEVDKAVTALAATVQMAPGGAAQ 147 Query: 215 ----------------------KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ A+++ +NRA A + + E+ Sbjct: 148 GLESLSAILSQEADNPAALQVMQRVAEKYPKNRAS-YYAVAQVALQSQQPAVALTALNEA 206 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTH--LLSENTVG 309 L L A + ++ + + ++A L + + +P ++ Y H + T Sbjct: 207 LALSPQWRAAYLLRVETYLRLERPQEALDDLSSLLRSSPQDYDLRLRYAHTLISLSRTRE 266 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM--LAMKIAPRKEIFLL 363 L +L + + + +L + +A++ QA LA+ + L Sbjct: 267 ALAEFRKLLQRHPDDARALYPAALLAIDAQFNAQARTWLQRLLALGERTDAAHYFL 322 >gi|218699992|ref|YP_002407621.1| tetratricopeptide repeat protein [Escherichia coli IAI39] gi|218369978|emb|CAR17752.1| conserved hypothetical protein [Escherichia coli IAI39] Length = 389 Score = 44.2 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 88/285 (30%), Gaps = 63/285 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWN-RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQCVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KGEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF-LLL 364 + L + I +A + A ++ P +F L+ Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLM 322 >gi|240279926|gb|EER43431.1| pre-mRNA splicing factor [Ajellomyces capsulatus H143] gi|325093056|gb|EGC46366.1| pre-mRNA-splicing factor [Ajellomyces capsulatus H88] Length = 941 Score = 44.2 bits (103), Expect = 0.055, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 29/161 (18%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R +A + +P+ + A V+ A + A L+ ++ A Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADANQTEHARELLSTARREAG 675 Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250 + R L N ++ + Sbjct: 676 TDRVWIKSVAFERQLGNTEQALDLANQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + C S+ + A++ KA IL++ P Sbjct: 736 TGTRACPRSVPLWLLASRLEEKAGVVVKARSILDRARLAVP 776 >gi|225563100|gb|EEH11379.1| pre-mRNA-splicing factor [Ajellomyces capsulatus G186AR] Length = 941 Score = 44.2 bits (103), Expect = 0.055, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 29/161 (18%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++A+R +A + +P+ + A V+ A + A L+ ++ A Sbjct: 616 LAKEKWQAGEIDNARRVLGRAFNQNPNNEDIWLAAVKLEADANQTEHARELLSTARREAG 675 Query: 220 EWNRNRAILLIARSLEN-----------------------------ADKGDMIASYHDAI 250 + R L N ++ + Sbjct: 676 TDRVWIKSVAFERQLGNTEQALDLANQGLQLYPKADKLWMMKGQIYEEQNKYPQAREAYG 735 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + C S+ + A++ KA IL++ P Sbjct: 736 TGTRACPRSVPLWLLASRLEEKAGVVVKARSILDRARLAVP 776 >gi|116622726|ref|YP_824882.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 547 Score = 44.2 bits (103), Expect = 0.055, Method: Composition-based stats. Identities = 26/221 (11%), Positives = 70/221 (31%), Gaps = 13/221 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A A ++ + + +++ ++L + G A ++ + + P + Sbjct: 242 ACAAGEHALTAKFCTLLVNSVPGHFEGWFNLALAHQKSGRFEQAAEAYSECVKLRPQSCE 301 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + A + + K + L +L G S Sbjct: 302 SHTNLGIVREQTGDTAGARSSYERAIKAGPDA----LAPLWNLALLLEHAGQFEESERYY 357 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK------IWKVNPHPEIANIYTHLL 303 + L A + + R A E W H +A Y+ + Sbjct: 358 KQVLDRAPKEEEARFRMGFLRLQREDYRGAAEAFEGCLKYRPAWPEA-HANLALAYSGMG 416 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + +L ++ + + +S+++L ++ ++++ D A Sbjct: 417 ERDHAERL--YEKMLDADPKSMDALRGLAALSIQANDYDTA 455 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 87/274 (31%), Gaps = 19/274 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 L + A + +S + E L V+ A E ++ Sbjct: 273 ALAHQKSGRFEQAAEAYSECVKLRPQSCESHTNLGIVR--EQTGDTAGARSSYERAIKAG 330 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 +++L G ++RY + LD +P + + +++ A Sbjct: 331 PDALAPLWNLALLLEHAGQFEESERYYKQVLDRAPKEEEARFRMGFLRLQREDYRGAAEA 390 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K W A L +A S ++ Y +++ S+ A A Sbjct: 391 FEGCLKYRPAWPEAHANLALAYS-GMGERDHAERLYEKMLDA---DPKSMDALRGLAALS 446 Query: 271 ISQNKKRKA----EVILEKIWKVNPHPEI----ANIYTHLLSENTVGKLKRALRLEEINK 322 I N A +++ + PE+ +Y ++ +L R L + Sbjct: 447 IQANDYDTALEFHVRLIDLGDRT---PEVLYNAGLMYEKAGQQDKSVRLYR-DALAQQA- 501 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + E+L+ + +I G ++A A++ P Sbjct: 502 DMPEALLNLGRILESNGKAEEARTCWAKALEAEP 535 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 6/162 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A + + E L + + A E ML A+ Sbjct: 383 DYRGAAEAFEGCLKYRPAWPEAHANL--ALAYSGMGERDHAERLYEKMLDADPKSMDALR 440 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L S + D ++A + + +D+ P V Y A + +++ A Sbjct: 441 GLAALSIQANDYDTALEFHVRLIDLGDRTPEVLYNAGLMYEKAGQQDKSVRLYRDAL--A 498 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 ++ + A+L + R LE+ G + ++L+ Sbjct: 499 QQADMPEALLNLGRILES--NGKAEEARTCWAKALEAEPALA 538 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 92/266 (34%), Gaps = 8/266 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A + +++Q+ ++L R G A + +A + P Sbjct: 76 GSFDEAAKSYRILVQVKPQYSMGWFNLAVCLERAGVWEDAAQSFHRAATLEPGYLDAHLG 135 Query: 194 VVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + ++ ++ A+ ++ + NA + + +SL +A+ D Y +E Sbjct: 136 LGVCHLRQEDPKSALFSFDRCLELNASHVDAQFGKAVALQSLGHAE--DASQIYQKILEK 193 Query: 253 LKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 ++S+ I + + R +E +LE + E + E+ + Sbjct: 194 NPDSEDSLSNLILIGMAKEDFDMVREYSEHLLELRPESTVALEGLASWACAAGEHALT-A 252 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 K L E ++ + G +QA +K+ P+ I + Sbjct: 253 KFCTLLVNSVPGHFEGWFNLALAHQKSGRFEQAAEAYSECVKLRPQSCESHTNLGIVREQ 312 Query: 372 SHNTDKILYWTQSALHAMPD---PLW 394 + +T + A+ A PD PLW Sbjct: 313 TGDTAGARSSYERAIKAGPDALAPLW 338 >gi|326435520|gb|EGD81090.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818] Length = 819 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 79/310 (25%), Gaps = 55/310 (17%) Query: 134 RQYNIAHEKLE-MMLQIPATR-------EFAVYSLYFESCRIGDLNSAQRYATKALDIS- 184 +++ A E + T +L G + A Y KAL I Sbjct: 284 GEHDRAIAYFETALAIRLRTEGEKGGNVAVLYNNLGNAYFSKGAYDRAIHYYDKALAIKV 343 Query: 185 -------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---------KNAKEWNRNRAIL 228 P + Y ++ +AI + K+ + Sbjct: 344 ETLGEKHPSTAETYNNLGNAYARKGDYDKAIELYEKALAIKVETLGEKHPSTAETYNNLG 403 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEK 285 S + D+ AI L + + + S+ +A EK Sbjct: 404 SAYASKGDYDRAIAFYEKDLAITVETLGEKHPSTADTYNNLGNAYYSKGAYDRAIHFYEK 463 Query: 286 IWKVNP------HPEIANIYTHL----LSENTVGKLKRA---------LRLEEINKESVE 326 + HP A Y +L ++ + L + + + + Sbjct: 464 ALAITAEALGEKHPSTAQTYNNLGIAYKNKGEYDRAIAFYEQALAITVEVLGKKHPSTAQ 523 Query: 327 SLVIVSKIALEMGSID-------QAHA-KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + G +A A + P + L + ++ Sbjct: 524 TYNNLGNAYKNKGDYGKAIECYEKARAVYVEALGEKHPYTAMTLANIGLLHDKRGEKEQA 583 Query: 379 LYWTQSALHA 388 +TQ AL A Sbjct: 584 CAYTQQALDA 593 >gi|317033275|ref|XP_001395168.2| heat shock protein STI1 [Aspergillus niger CBS 513.88] Length = 580 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 12/146 (8%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A E L T + + + D A K + P Sbjct: 346 GDLTQAIEYYHKSLTEHRTPDVLTK--LRNAEKAKDK------AEKEAYVDPAEAEKARE 397 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Q+ +W A+ + K A + R R+ + D E+ Sbjct: 398 LGQKKFQEADWPGAVEAFTEMVKRAPQDPRG----FSNRAAALIKLMAFPQAVQDCDEAT 453 Query: 254 KLCDNSIMASICAAKSLISQNKKRKA 279 K I A + A++LI+ + KA Sbjct: 454 KRDPKFIRAYMRKAQALIAMKEYNKA 479 >gi|308389044|gb|ADO31364.1| putative periplasmic protein [Neisseria meningitidis alpha710] gi|325129996|gb|EGC52790.1| tetratricopeptide repeat protein [Neisseria meningitidis OX99.30304] Length = 612 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 356 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 357 YAKVRQWLKK-VSAP 370 >gi|303251471|ref|ZP_07337647.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649703|gb|EFL79883.1| hypothetical protein APP6_0676 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 398 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 36/196 (18%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 91 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ L + + A A K + I P Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEP------------------------------ 180 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + A++++N D +++ A+E ASI ++QN+ Sbjct: 181 -DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALE---YSPQCARASILLGDYYLAQNQ 236 Query: 276 KRKAEVILEKIWKVNP 291 + A E+I + +P Sbjct: 237 FQSALKNYERILQQDP 252 >gi|168705189|ref|ZP_02737466.1| hypothetical protein GobsU_36991 [Gemmata obscuriglobus UQM 2246] Length = 863 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 1/130 (0%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 +L ++AL + +A E L+ + A ++ + L + D A + +AL Sbjct: 177 AHLAVAELALTKHDRALAAETLQKAPKEAAGQDPRYHHLLARAFAEDDRARATKAIAEAL 236 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 I+P + A++++ A L R A A + D Sbjct: 237 AINPHHADSLLFRADHLIDAEDFAGAEDVLKAVLATDPGEPRAWAY-RAAVAHLREDAAG 295 Query: 242 MIASYHDAIE 251 A+ A+ Sbjct: 296 EKAAREKALA 305 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 5/112 (4%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IP 150 + A + A + + L Q A + N A +L+ +P Sbjct: 743 LGAAGGDWTAAARNARRWLAVNPLTPTPHRAL--AQAAEHLNERNEATTAYRAVLRFGVP 800 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L + G+ ++A+R KAL+ +P E +++ A+ Sbjct: 801 DAASVRYR-LAVLLEQSGERDAARREVLKALEEAPRFREAHELLLKLVAAAE 851 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 67/227 (29%), Gaps = 16/227 (7%) Query: 166 RIGDLNSAQRYATKALDISPD---APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 G+ +A + A PD + V + KE + + + ++ N Sbjct: 79 ARGEYTAAGKTIEDARTRFPDDLVLHLLAHEVYRTSGREKEAAATLAAVQRQIDNRAAST 138 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + L L + + +K + A + A+ ++++ + A Sbjct: 139 PAERVALGRYLLSTGADAKEVLDRYF-NPVVKNTPAYLDAHLAVAELALTKHDRALAAET 197 Query: 283 LEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L+K K H +A + ++ K IN +SL+ + + Sbjct: 198 LQKAPKEAAGQDPRYHHLLARAFAE---DDRARATKAIAEALAINPHHADSLLFRADHLI 254 Query: 337 EMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIE--QANSHNTDKILY 380 + A + P + + A + + ++ Sbjct: 255 DAEDFAGAEDVLKAVLATDPGEPRAWAYRAAVAHLREDAAGEKAARE 301 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 63/200 (31%), Gaps = 14/200 (7%) Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------RNRAILLIARSL 234 L P + W + + + V ++W+ A LN + E+ A+L + Sbjct: 656 LQKHPQSFWGRQRLCRGLVREQKWAEAEKELNALRTLYPEYAGPNNAYELLAVLYRQTAR 715 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + + ++ + R+ + PH Sbjct: 716 PKEEGAALEEWAKRDGDATAAHQRLTELGAAGGDWTAAARNARRWLAV--NPLTPTPHRA 773 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A HL N RA L ++ ++ + + G D A + + A++ Sbjct: 774 LAQAAEHLNERNEATTAYRA-VLRFGVPDAASVRYRLAVLLEQSGERDAARREVLKALEE 832 Query: 355 APRKE-----IFLLLAQIEQ 369 APR + L+A E+ Sbjct: 833 APRFREAHELLLKLVAAAEK 852 >gi|82776644|ref|YP_402993.1| tetratricopeptide repeat protein [Shigella dysenteriae Sd197] gi|309789047|ref|ZP_07683642.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] gi|81240792|gb|ABB61502.1| putative heat shock protein [Shigella dysenteriae Sd197] gi|308923318|gb|EFP68830.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] Length = 389 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 41/194 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + +NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADNNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKI 286 + + KA L+++ Sbjct: 227 KGEYAKAVESLQRV 240 >gi|329999181|ref|ZP_08303373.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3] gi|328538373|gb|EGF64503.1| tetratricopeptide repeat protein [Klebsiella sp. MS 92-3] Length = 1350 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 25/275 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188 A ++ E +LQ A+ + + + R GD +A +Y ++A D+ DA Sbjct: 283 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 342 Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +A+ + + + ++Q + + + L AD Sbjct: 343 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGAQGASAKLFRADVLRHNKDLP 402 Query: 248 DAIESLKLCDNSIMASICAAK-----SLISQNKKRKAEVILEKI-----WKVNPH----- 292 A ++L+ N + AA+ L QNK +A+ +L+ + K+ P Sbjct: 403 QAEQTLRSLLNDDPQNA-AARENLYYVLREQNKSAEAQAMLQTLPQSLRQKLQPRVVAGM 461 Query: 293 PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 P A + S N G + + + ++++ + G+ +A + Sbjct: 462 PGDALRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSLMS 521 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 A + A + + + + Sbjct: 522 AAYRPGASNSALYA-AALFASENGAWQQAQTLLAR 555 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 101/367 (27%), Gaps = 79/367 (21%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 + + +R +A G ++ + N A++ V Q + + L + IA Sbjct: 261 VQNYFRQRRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 315 Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176 Y A + L + Y ++ + G+++ A Sbjct: 316 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 375 Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 A A L + D P + + + + A L + + Sbjct: 376 LAQQSGAQGASAKLFRADVLRHNKDLPQAEQTLRSLLNDDPQNAAARENLYYVLREQNKS 435 Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258 +A+L ++ G+ + E + + Sbjct: 436 AEAQAMLQTLPQSLRQKLQPRVVAGMPGDALRRQAQAQVSSGNPAGAIATLREGVARYPD 495 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 + A+ L +A ++ ++ P + +Y L + G ++A L Sbjct: 496 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNSALYAAALFASENGAWQQAQTLL 553 Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359 ++ ++ ++ L G+ A P+ + Sbjct: 554 ARIPGGSQTSDMRDLRQRVNYNLQLVTAENYLAQGNTIAASNTLRAMASTPPKAPADAGK 613 Query: 360 IFLLLAQ 366 + LLA+ Sbjct: 614 LARLLAE 620 >gi|322435245|ref|YP_004217457.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9] gi|321162972|gb|ADW68677.1| serine/threonine protein kinase [Acidobacterium sp. MP5ACTX9] Length = 839 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 98/294 (33%), Gaps = 39/294 (13%) Query: 135 QYNIAHEKLEMMLQIPATRE------FAVYSLYFESCRIGDLN---SAQRYATKALDISP 185 + A E E + + L + S +G A+R KAL + P Sbjct: 527 DLDRARELFES-VTTQDVDFAPGWSGLGITHLQYASHGLGGQMHVLEARRAFDKALQLDP 585 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + V + E A + ++A N L+ ++L G + Sbjct: 586 GSVESNLYRVYMLLSRGEKESARHGIENLLQSA--GNDWNVHLVAGQTLRI--DGMYEEA 641 Query: 246 YHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 +L+L ++ A++ A+ QN+ A LEK + P + I Sbjct: 642 LEQFNTALRLNPSN--AALIYNNRARVFQYQNQLELAADELEKGLTLEPKQPLLRISLGY 699 Query: 303 LSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSIDQAHA---KAMLAMKIAP 356 T K LE++ E ++ ++ +++G ++A L+ A Sbjct: 700 QQMRTGDLAKAIETLEKVTSEEKSLRIVYPTIALCYVQLGDREKAATFIVDETLSAAEAD 759 Query: 357 RKEIFLLLA--QIEQANSHNTDKILYWTQSALHAMPD--------PLWISDDGY 400 + + L +E + + L+W + A++ + P W G+ Sbjct: 760 SEMAYRLATYFALE----GDESEALHWLRRAIYLGNENYPWFSINPAWRKLGGH 809 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 26/182 (14%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MM 146 LY M ++ AR H + + N++ V+L+ Q + Y A E+ + Sbjct: 592 LYRVYMLLSRGEKESAR--HGIENLLQSAGNDWNVHLVAGQTLRIDGMYEEALEQFNTAL 649 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYA----TKALDISPDAPWVTEAVVQQYVLAK 202 P+ +Y R+ + A K L + P P + ++ Q + Sbjct: 650 RLNPSNAAL----IYNNRARVFQYQNQLELAADELEKGLTLEPKQPLLRISLGYQQMRTG 705 Query: 203 EWSRAITFLNQ---------------KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + ++AI L + + +R +A I +A + D +Y Sbjct: 706 DLAKAIETLEKVTSEEKSLRIVYPTIALCYVQLGDREKAATFIVDETLSAAEADSEMAYR 765 Query: 248 DA 249 A Sbjct: 766 LA 767 >gi|116626875|ref|YP_829031.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116230037|gb|ABJ88746.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 673 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 21/234 (8%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRN 224 A+ +AL + P+ A+ + + +W+ A + + E Sbjct: 423 AEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGANASFQRAR----ELEPG 478 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVIL 283 A + + + G + + ++++ +S+ + L + +A Sbjct: 479 NAEAIRGAASLANNLGHLDEAVALGRRAIEIDPLDSVTYNNL-GIVLYRAGRPEEAVAEF 537 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P H I +Y L+ L A L E L + + Sbjct: 538 RRALEITPERERTHSMIGRVY--LVQSRPQEAL--AEMLLEKRP--AFRLFGLGLAYHAL 591 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 G ++ A ++ P + + A++ A +K W + A +A PDP Sbjct: 592 GRKQESDASLAELIQKFPTGYPYQI-AEL-YAFRGENEKAFEWLERA-YAEPDP 642 >gi|57999456|emb|CAI45938.1| hypothetical protein [Homo sapiens] Length = 914 Score = 44.2 bits (103), Expect = 0.056, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLVRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 688 EIWMKKAIKLQAD 700 >gi|299138067|ref|ZP_07031247.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8] gi|298599997|gb|EFI56155.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8] Length = 691 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 35/194 (18%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 N+A++ A +AL + P A+ L W A+ + + A E + +++ Sbjct: 426 QNAAKQLAQQALQLDPQLAEAHAALGDV-ALRSAWDFALG--ESELRRAIELDPHKSTYH 482 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + +G + + ++ A Sbjct: 483 AWLASLLVYEGRFDEALSEIDRAVADDP-LWPLVYSMA---------------------- 519 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 Y ++ + + A + + +S ES + D+A A+ Sbjct: 520 --------TYVAGMAHDNNQAIAFAQKYVSLVPDSPESHNQLGWAYFCAKHYDEALAEWG 571 Query: 350 LAMKIAPR-KEIFL 362 ++ I L Sbjct: 572 RMAEMDKDSARIAL 585 >gi|256421291|ref|YP_003121944.1| hypothetical protein Cpin_2252 [Chitinophaga pinensis DSM 2588] gi|256036199|gb|ACU59743.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588] Length = 954 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 89/260 (34%), Gaps = 24/260 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATK 179 YLL ++ E E ++ P E A+ S+Y R G A Sbjct: 176 YLLAGHYYQQRNNQLLSQENYEKALMLDPDNEEAKAAINSMYV---RSGSFTKAIEQVNA 232 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AKEWNRNRAILLIARSLENA 237 AL I+P + + + +++ AI L Q K A R+ L + Sbjct: 233 ALAINPGSYELMMRKLGLLQDMHDYAGAIDQLQQILKRWPADAKARSTETTLRMEAAAWY 292 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IA 296 D Y E + A +S+ R+A + + K NP+ + + Sbjct: 293 ANTDPFLLYAGIAEKN---PGNREALDKVIGMSMSRGAYREALAWINRGLKNNPNDQRLL 349 Query: 297 NIYTHLLSENT--------VGKLKRALRLEEINKESVESLVIVS--KIALEMGSIDQAHA 346 ++ +L + +L R ++ S S + ++ + L D A A Sbjct: 350 SLKLDVLESDRKFAEAALLAERL-RYNNAGTADQRSRYSALKIASGRDYLAQQQYDLALA 408 Query: 347 KAMLAMKIAPRKEIFL-LLA 365 + A++ PR + L+A Sbjct: 409 EFDKALQTDPRDTTAMDLMA 428 >gi|194767414|ref|XP_001965811.1| GF13981 [Drosophila ananassae] gi|190625935|gb|EDV41459.1| GF13981 [Drosophila ananassae] Length = 396 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 71/218 (32%), Gaps = 18/218 (8%) Query: 70 AMLFHMLHKRNYD----KGYKALYTGLMSIAAHNIPLARKMHSYVSQ---QHTFHNEYLV 122 L + GY L L++ ++ A + + Q + L Sbjct: 137 EALDNYRRAVRLKPDFIDGYINLAAALVAAR--DMESAVQAYITALQYNPELYCVRSDLG 194 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL+ + A ++ A +L G++ A + KA+ Sbjct: 195 NLLKA-----LGRLEEAKACYLKAIETCPGFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 249 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ + A+ + RA+ + + N A++ + ++G + Sbjct: 250 LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSP----NNAVVHGNLACVYYEQGLI 305 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +++L N A A +L + + ++AE Sbjct: 306 DLAIDTYRRAIELQPNFPDAYCNLANALKEKGQVKEAE 343 >gi|171679509|ref|XP_001904701.1| hypothetical protein [Podospora anserina S mat+] gi|170939380|emb|CAP64608.1| unnamed protein product [Podospora anserina S mat+] Length = 1427 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 29/206 (14%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQK 214 +Y+ + D A+R KA+++SP E + + + +W R A ++ Sbjct: 582 GIYY-ADYAKDKKRARRCFQKAVELSPSEVLSAERLARSFADDGDWDRVELVAQRVVDSG 640 Query: 215 KKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K ++ + I +L A+ K D + +L++ N + + +S Sbjct: 641 KVKPPPGSKRKGISWPFSALGVAELNKQDYHKAIVSFQAALRISPNDYHSWVGLGESYHG 700 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + A L K+ P+ + + T + I++ Sbjct: 701 SGRYIAATKALLNAQKLEESPD-----VEITGQETW-----------------FTRFILA 738 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ E+G D A ++ P + Sbjct: 739 EVKRELGDFDDAIDLYKQVLEDRPEE 764 >gi|29347261|ref|NP_810764.1| TPR repeat-containing protein [Bacteroides thetaiotaomicron VPI-5482] gi|253571996|ref|ZP_04849401.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_6] gi|298387428|ref|ZP_06996980.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_14] gi|29339160|gb|AAO76958.1| TPR-repeat-containing protein [Bacteroides thetaiotaomicron VPI-5482] gi|251838593|gb|EES66679.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_6] gi|298259635|gb|EFI02507.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_14] Length = 272 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 9/171 (5%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 S+A L Q K + N A+L L G+ + +L ++ + Sbjct: 38 SKAEELLLQALK-LEPKNAKNAMLFSNLGLVQRRLGEYDKALESYSFALNFAPLAVPILL 96 Query: 265 CAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEE 319 A + +A +L++ K N + Y + L + ++ RL E Sbjct: 97 DRAAINLEMGNTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLE 154 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 I+ +S + ++ + + G +A + P +++ A +E+ Sbjct: 155 IDPQSYSGRLGLATLEQKEGKFKEALEILNKMITATPEDATLYIARADVER 205 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 59/199 (29%), Gaps = 40/199 (20%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L +++ N A + V + + E L L+ I + R Y A +L Sbjct: 96 LDRAAINLEMGNTDRAYTDYCQVLDEDKQNKEAL--LMRAYIYVLRRDYPAARIDYNRLL 153 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 +I L + G A K + +P Sbjct: 154 EIDPQSYSGRLGLATLEQKEGKFKEALEILNKMITATP---------------------- 191 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 A L IAR+ + + D E+++L +S A + Sbjct: 192 ----------------EDATLYIARADVEREMKHEDLALVDLEEAIRLNPSSADAYLLRG 235 Query: 268 KSLISQNKKRKAEVILEKI 286 ++Q KK A++ EK Sbjct: 236 NIYLTQKKKALAKMDFEKA 254 >gi|86147458|ref|ZP_01065770.1| TPR repeat protein [Vibrio sp. MED222] gi|85834751|gb|EAQ52897.1| TPR repeat protein [Vibrio sp. MED222] Length = 334 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 16/129 (12%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y+AL ++ A K+ S + +LE + ++ IA E + Sbjct: 164 YQALSQSEVA--------ALKVDSMSPASAFMG----IGVLE----DVDGKHQIAQEYFK 207 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L I T A+ ++ + G+ A +Y AL+I P+ + Y+ + + Sbjct: 208 KSLTIDKTSVKALLNMGYSHYMYGNYKEAYQYTRSALEIEPNNEKAQNNLALIYLASGDV 267 Query: 205 SRAITFLNQ 213 +AI + Sbjct: 268 KKAINVFMR 276 >gi|116748131|ref|YP_844818.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697195|gb|ABK16383.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter fumaroxidans MPOB] Length = 626 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 79/262 (30%), Gaps = 27/262 (10%) Query: 130 ALAERQYNIAHEKLE---MMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + + + A + + P T Y + + + ++A+ K Sbjct: 241 YQIQNKVDDALMVYLDLFKLSEEPETFKEFLQ----YIQKKKSKE-DAARFL-EKHQQHI 294 Query: 185 PDAPWVTEAVV--QQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLENADKGD 241 P A + + K W++A T + K K+ + + + + + D Sbjct: 295 PKAFQSSLMLFLADLNTQTKNWAKAATSYEKAIKAGIKDPDVLYNLAVTYQQSD--DPDK 352 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIY 299 I + ++ + + + + +A E + + NP + + Sbjct: 353 AIQALEKYLQKN---PGDTKSWLQLGELQEKKGALTQARSTYEAMLQKNPQNREALVRLV 409 Query: 300 THLLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-- 356 L G L+ A +L + + + + D+A A + + P Sbjct: 410 AILEKGKDKGALQAAYQKLAATQPRNKTIQHNLGVLYYDARKYDKAAACFEAVVALDPKD 469 Query: 357 -RKEIFLLLAQIEQANSHNTDK 377 +LL I + ++ Sbjct: 470 VESRKYLL--DIYRKQKNDKAA 489 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 78/248 (31%), Gaps = 26/248 (10%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + ++ ++ P +Y+L + D + A + K L +P + + Sbjct: 324 EKAIKAGIKDPDV----LYNLAVTYQQSDDPDKAIQALEKYLQKNPGDTKSWLQLGELQE 379 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC--- 256 ++A + + + NR + L+A +KG + A + KL Sbjct: 380 KKGALTQARSTYEAMLQKNPQ-NREALVRLVA----ILEKGKDKGALQAAYQ--KLAATQ 432 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGK 310 + K KA E + ++P + + +IY ++ Sbjct: 433 PRNKTIQHNLGVLYYDARKYDKAAACFEAVVALDPK-DVESRKYLLDIYRKQKNDKAATA 491 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQI 367 + L +++ ++ + K + A A + P + L A + Sbjct: 492 V--IQSLAQLDPKNTSYYDTIFKSYEQKKDYKGMAAFFRTASQQHPEMVALHNYALFAAL 549 Query: 368 EQANSHNT 375 + ++ Sbjct: 550 KTGDNKGA 557 >gi|330506457|ref|YP_004382885.1| TPR repeat-containing protein [Methanosaeta concilii GP-6] gi|328927265|gb|AEB67067.1| TPR repeat-containing protein [Methanosaeta concilii GP-6] Length = 250 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 45/133 (33%), Gaps = 13/133 (9%) Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R + +Y ES D A+ + P+ + + A Sbjct: 130 EGRLLQLQGMYEESVAKFDG---------AIALDPNYKEALYLKGITQMALGNYEDAKAL 180 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 +Q + + + + L G ++ + + ++L++ A I +L Sbjct: 181 FDQALVVDPNYKQ----AYLGKGLALHADGKLVEAQQEYDKALEIDPGYSSAKISKMHAL 236 Query: 271 ISQNKKRKAEVIL 283 ++ NK R+A +L Sbjct: 237 MAMNKPREAFGML 249 >gi|328701579|ref|XP_001951487.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 1 [Acyrthosiphon pisum] Length = 1177 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 80/259 (30%), Gaps = 16/259 (6%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L ++ + A + V + V L L A E + Sbjct: 166 LGKACIAFNRKDFRGALAYYKKVL-RSNPQCPADVRLGMAHCFLKLGNAEKARLAFERAI 224 Query: 148 QIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 Q+ + A+ L GD+ +KA I P V + + K++ Sbjct: 225 QLDSKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDTTNPMVLNHLSNHFFFKKDY 284 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMAS 263 ++ L + E RA + + + ++ ++ + ++ Sbjct: 285 TK-YELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYYQATQFAPVTFVLPH 343 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHLLSENTVGKLK-RAL 315 + I A EK+ K HP + ++Y + ++ K Sbjct: 344 YGLGQMYIYGGDMENAAQCFEKVLKA--HPGNYEAMKILGSLYANSKNQQKRDIAKSHLK 401 Query: 316 RLEEINKESVESLVIVSKI 334 ++ E + VE+ + +++I Sbjct: 402 KVTEHFPDDVEAWIELAQI 420 >gi|307252293|ref|ZP_07534190.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860215|gb|EFM92231.1| hypothetical protein appser6_8110 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 391 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 36/196 (18%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 84 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ L + + A A K + I P Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEP------------------------------ 173 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + A++++N D +++ A+E ASI ++QN+ Sbjct: 174 -DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALE---YSPQCARASILLGDYYLAQNQ 229 Query: 276 KRKAEVILEKIWKVNP 291 + A E+I + +P Sbjct: 230 FQSALKNYERILQQDP 245 >gi|293373227|ref|ZP_06619589.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|292631875|gb|EFF50491.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f] gi|295085103|emb|CBK66626.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A] Length = 272 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 9/169 (5%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q K + N A+L L G+ + +L ++ + Sbjct: 40 AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLDR 98 Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEIN 321 A + K +A +L++ K N + Y + L + ++ RL E++ Sbjct: 99 AAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLELD 156 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 +S + ++ + + G +A + P +++ A +E+ Sbjct: 157 PQSYSGRLGLATLEQKEGKFREALEILNKMLAATPEDATLYIARADVER 205 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 6/166 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L I + + + A+ +++ + +E + Y R D +A+ + Sbjct: 94 ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ P + + ++ A+ LN+ E A L IAR+ + Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFREALEILNKMLAATPE----DATLYIARADVEREMK 208 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L S A + ++Q KK A+ EK Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254 >gi|292492667|ref|YP_003528106.1| hypothetical protein Nhal_2643 [Nitrosococcus halophilus Nc4] gi|291581262|gb|ADE15719.1| Tetratricopeptide domain protein [Nitrosococcus halophilus Nc4] Length = 387 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 81/222 (36%), Gaps = 21/222 (9%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR- 223 R G L+ A+ +AL ++ Y K WS+AI Q + + E Sbjct: 118 MRAGMLDRAESLFLEALKRKSHVGTALRQLLDIYQQEKNWSQAIAIAQQLHEESGEATGP 177 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + + + ++ + ++L + A++ A + Q+ + A L Sbjct: 178 MIAHFYCELAEQRWARKQIMEAAQFIKQALASDWRCVRATLLQAHLAMEQSDYKMAIRCL 237 Query: 284 EKIWKVNPH--PE----IANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL 336 ++ +P PE ++ Y L ++ L E + + +I+++ A Sbjct: 238 RRVEGQDPDYLPEILKPLSECYQGLDRQDEF-----FSWLAEALERHPGCTPLILAQAAS 292 Query: 337 --EMGSIDQAHAKAMLAMKIAPR-KEIFLLLA-----QIEQA 370 G +++ + ++ P + + LLA IE A Sbjct: 293 LRRQGEPEKSRRFLLEQLRQYPSVEGLQQLLALGVPKDIEAA 334 >gi|262305013|gb|ACY45099.1| acetylglucosaminyl-transferase [Machiloides banksi] Length = 289 Score = 44.2 bits (103), Expect = 0.057, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ H + L L I + A + + P A Sbjct: 34 GQVVEAEECYNTALHLCPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALHLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|255019396|ref|ZP_05291505.1| putative heat shock protein [Acidithiobacillus caldus ATCC 51756] gi|254971168|gb|EET28621.1| putative heat shock protein [Acidithiobacillus caldus ATCC 51756] Length = 381 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 48/341 (14%), Positives = 111/341 (32%), Gaps = 35/341 (10%) Query: 41 PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100 + L L + +F R L P + L+ D+ +A+ L ++ Sbjct: 7 LVFLAGALGMALGLVVAVFWRPRRALLVPEVYVQGLNHLLSDRSDEAVEAFLEALR---- 62 Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + +L ++ + A + +L+ P Sbjct: 63 ----------------QHPESTDILMALGRLFRRRGELERALRVHQYLLEQPGLSLSLRQ 106 Query: 159 SLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + E + G LN A+ + L +A+ + Y L +W +A+ + Sbjct: 107 EVLLEIARDYLKSGILNRAESILKELLQRDDRYVDGLQALAELYELGADWPQAVAVRRRL 166 Query: 215 KKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K +E L+ + +GD+ A+ E+ ++ +S I + ++ Sbjct: 167 KALGREGQEAIIALICGEMAEAAIGRGDVTAARQYLAEAREVDPDSPRTQIIEGRLAFAE 226 Query: 274 NKKRKAEVILEKIWKVNPHPEIANI---YTHLLS---ENTVGKLKRALRLEEINKESVES 327 +A ++ +P + + + L + + RA L+ + + Sbjct: 227 GAWERAAGTWARLLDTGAYPALLLVVRPFLEALKRCLDQPSCRSWRARLLDRF--DDTLT 284 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + V++ LE+ + A A+ + LL ++E Sbjct: 285 VYRVAQALLEVDGTEAARDYLRRALNARKGLPVVQLLLRLE 325 >gi|104780453|ref|YP_606951.1| methyltransferase, CheR-like [Pseudomonas entomophila L48] gi|95109440|emb|CAK14141.1| putative methyltransferase, CheR-like [Pseudomonas entomophila L48] Length = 415 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 1/99 (1%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L + A A E L+ A + Y L S GD A + KAL + Sbjct: 318 LIARHAN-TGDSEQARAGCERYLRQFAPKAQVYYWLGLLSDTEGDAAQAITHYRKALYLE 376 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 P P + + + A + + +E R Sbjct: 377 PQHPETLVHLAALLASQGDVAGARRLQERAARAGRESER 415 >gi|73538250|ref|YP_298617.1| TPR repeat-containing protein [Ralstonia eutropha JMP134] gi|72121587|gb|AAZ63773.1| TPR repeat [Ralstonia eutropha JMP134] Length = 271 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 37/132 (28%), Gaps = 8/132 (6%) Query: 154 EFAVYS--LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + L+ + D A+ +A+ P + ++ A+ Sbjct: 132 AVGLSGHELFEIAQEFEREDPEEAELAYRRAIAADPGLLDAYVNLGCLLCDRARYADAVD 191 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + R ++ D G A+ + + L + A AA+ Sbjct: 192 LYRAALEQGLDGPLIR----FNLAVALEDSGYAEAALAEYHACIALAPDLADAHYNAARL 247 Query: 270 LISQNKKRKAEV 281 + ++A Sbjct: 248 HEAMGDHQRAIR 259 >gi|324509072|gb|ADY43822.1| Adenosine monophosphate-protein transferase FICD [Ascaris suum] gi|324510406|gb|ADY44351.1| Adenosine monophosphate-protein transferase FICD [Ascaris suum] Length = 480 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Query: 271 ISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE----EINKESV 325 + RKAE I++ + P HP+I Y L+ E L A L N Sbjct: 131 RKKGNMRKAETIIQHALALAPNHPDILTEYGILV-ETVRKNLVEAEELYTRALSYNPHHT 189 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 E+LV ++ + ID K + A++ RK + L +I + + + Sbjct: 190 EALVRRARTLPLVEEID---KKMLKALR---RKRAYFL--RIPRNSPALKRAMRE 236 >gi|325127986|gb|EGC50885.1| tetratricopeptide repeat protein [Neisseria meningitidis N1568] Length = 612 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMMYADRRD 356 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 357 YTKVRQWLKK-VSAP 370 >gi|313157652|gb|EFR57065.1| clan AA aspartic protease, TIGR02281 family [Alistipes sp. HGB5] Length = 686 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 25/84 (29%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 QI + Y A ML+ + A+ L + ++A K Sbjct: 147 RAQIYYDLKDYANADADYRQMLKHDEADQVAMIGLIRNMIARKEYDAALELVNKCEKYDT 206 Query: 186 DAPWVTEAVVQQYVLAKEWSRAIT 209 D +Q Y E +AI Sbjct: 207 DYDETYRFRMQIYDKTGEVDKAID 230 >gi|307634697|gb|ADI83237.2| lipoprotein, putative [Geobacter sulfurreducens KN400] Length = 696 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 72/208 (34%), Gaps = 14/208 (6%) Query: 97 AHNIPLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A + K+ + + L A + + R Sbjct: 430 AGDNEALVKLALENRDYLGRVLAEDDFIKNLSAAFADL-GRIKEEVGLYANLAIREQNRV 488 Query: 155 FA---VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAI 208 +A + ++ ++GD ++ A + ++ P PWV + + ++ R + Sbjct: 489 YAPELYRRILHDAEQLGDPTLMEKAAGEFVERFPAHPWVQRFREELAAVEYNRGDFQRVV 548 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMIASYHDAIESLKL----CDNSIMAS 263 L+ + ++ + +SL+ + ++ D + + L+ + AS Sbjct: 549 GRLSGMLASGTRPEYAESLYYLGKSLDASGNRRDAERAMLLFLAELRRREMSSPLAADAS 608 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP 291 AA + +S+ ++ A+ IL + +P Sbjct: 609 YVAATARLSRGDRKGAKEILRAAGEASP 636 >gi|115452873|ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group] gi|108708021|gb|ABF95816.1| expressed protein [Oryza sativa Japonica Group] gi|113548508|dbj|BAF11951.1| Os03g0336000 [Oryza sativa Japonica Group] gi|125543773|gb|EAY89912.1| hypothetical protein OsI_11461 [Oryza sativa Indica Group] gi|215712300|dbj|BAG94427.1| unnamed protein product [Oryza sativa Japonica Group] Length = 545 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 60/213 (28%), Gaps = 33/213 (15%) Query: 52 LFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAH-------NIPLAR 104 + I+L A+ R +KR G++A L ++A N+ Sbjct: 341 ISFSIVLQALLRA---GETSAAWQAYKRMERAGFEADGRALDTLARGLCRQCAANVAALA 397 Query: 105 KMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQI----------PAT 152 + +E + Y L Q + + A L M + Sbjct: 398 DAREVFGKLVASGHEPVSYTYCLMAQALARGGEVDAAVSLLGEMARRGYALRKRAYTDVV 457 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 R ++ R+ L A+ + P +A++ + W A+ Sbjct: 458 RALCERGRARDALRVLALVIARDFV-------PGRN-AFDALLGELARQGRWPDAMAVYA 509 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 K + R +L ++ + S Sbjct: 510 AAVKRGVLVSLKR---HSKEALLVQEQTETRES 539 >gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1417 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 65/167 (38%), Gaps = 12/167 (7%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++ + + A+ + N+ N A + + E DK D + + + Sbjct: 17 LEFQ-ESGNFDEAVEYFNRVL--NINLNHEDANYNLGFTYEKQDKLD--QALECYKKVIS 71 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGK 310 + + I A + A+ +Q+ ++ LEK +++ P A Y L ++N + + Sbjct: 72 INPSYIKAYVSIARVYFNQDNLDESIKFLEKAIEID--PNYAEAYERLGWVYENQNLIDQ 129 Query: 311 -LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + EI+ ++S + + G ID+ ++I P Sbjct: 130 AIDSYKKAIEIDPNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDP 176 >gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus str. Delta H] gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus str. Delta H] Length = 379 Score = 43.8 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 8/171 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKA 180 +L + +L + +Y A ++ + P E Y+ + + A K Sbjct: 19 HLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKR--PEKALECYEKI 76 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L +P + A+ + K ++ A ++L + G Sbjct: 77 LKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKY----AGAWNNKALVLKELG 132 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++L++ A LI K +KA EK ++NP Sbjct: 133 RYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNP 183 Score = 37.6 bits (86), Expect = 5.4, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 38/124 (30%), Gaps = 4/124 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G + + KAL I+P + A+ + + E ++ Sbjct: 234 GRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDK---- 289 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + L + G + ++L++ A L K ++ +K Sbjct: 290 TWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKAL 349 Query: 288 KVNP 291 K+NP Sbjct: 350 KLNP 353 >gi|307107432|gb|EFN55675.1| hypothetical protein CHLNCDRAFT_133909 [Chlorella variabilis] Length = 637 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 24/251 (9%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 Q+A +R ++A + M R+ ++ ++ G N+ R A A Sbjct: 141 AAQVAAGQRDASVALQAWGMFESDQGRRQEARQLLQRAVAADARHAGAHNALGRLAESAG 200 Query: 182 DI-------------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + P +A+ ++A + + A L Sbjct: 201 QLAAAAAHFQAAIAAEPKHAPSLQALALLEAKRGRLAKAQRLFGAAVQACP----SNAQL 256 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 A +L +G+ A+ +E + C AK + A + K + Sbjct: 257 YQAWALMEWRQGNYGAAKRLFLEGEEECLPHAPLLAGHAKMEAQRRNIAAARRLYRKALQ 316 Query: 289 VNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 V+P HP+ + S NT ++ LR + ++ L ++ + +++G A Sbjct: 317 VDPGHPQSILGLGQLEARSGNTDAAMQLYLRGLQAQPRNMHLLSSLAHLHVQLGDQQAAR 376 Query: 346 AKAMLAMKIAP 356 +++ P Sbjct: 377 GVWRRLVEVEP 387 >gi|254429829|ref|ZP_05043536.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] gi|196195998|gb|EDX90957.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] Length = 137 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 42/95 (44%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ + GD + A+RY +AL+I+PD+ W+ + + + + A F + + A + Sbjct: 37 QARQQGDNSRAERYLERALNIAPDSSWLYKQLADLRLTEGDARGAEGFALKALRLAPDHP 96 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 +A L + +GD + + L D Sbjct: 97 EYQAGLWELVATARDRQGDAAGAKAARERAATLRD 131 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 8/119 (6%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + Q + L L + A + + A LE L I + L GD Sbjct: 19 ASQELDGSPALSLLTSAEQARQQGDNSRAERYLERALNIAPDSSWLYKQLADLRLTEGDA 78 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A+ +A KAL ++PD P + + A++ Q + R RA L Sbjct: 79 RGAEGFALKALRLAPDHPEYQAGLWELVATARD--------RQGDAAGAKAARERAATL 129 >gi|329902583|ref|ZP_08273145.1| hypothetical protein IMCC9480_461 [Oxalobacteraceae bacterium IMCC9480] gi|327548730|gb|EGF33372.1| hypothetical protein IMCC9480_461 [Oxalobacteraceae bacterium IMCC9480] Length = 1326 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 10/165 (6%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + A + A + L LL+ A ++ ++ T Sbjct: 543 AAAFAELERAGAVAPVSDGDFWRAYAELAMLLQNDAAARTGLRSLLAGDIQN--DNDLTN 600 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + + +A + A A + +A + +W+ A L + Sbjct: 601 LIGL-------LEVSQPLAAAQLAEFAYASKGNPRTALQA-LNLRARLADWAGARALLAR 652 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + L R+ D+ + D +L L N Sbjct: 653 LTPEQRRLLEQDPAFLTLRASIAQSGNDLDGALRDMRAALALRPN 697 >gi|262305029|gb|ACY45107.1| acetylglucosaminyl-transferase [Pedetontus saltator] Length = 289 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ H + L L I + A + + P A Sbjct: 34 GQVVEAEECYNTALHLCPTHADSLNNL--ANIKREQGYIEEATRLYVKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ I P + ++ A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGQVVEAEECYNTALHLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYVKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|268315734|ref|YP_003289453.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252] Length = 465 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 31/188 (16%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A E E +L+I Y++ + + +A +Y AL+ P Sbjct: 256 GDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYG 315 Query: 194 VVQQYVLAKEWSRAITFLNQK------------KKNAKEWNRNRAILLIA---------- 231 + Y + + AI + + K E+N R + Sbjct: 316 LGCCYDALERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDP 375 Query: 232 --------RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + G + + ++L L ++ A I A++L++ + + L Sbjct: 376 QNRDAWLDYAETLLEAGYVEEALQAYRQALTLNPDAR-AYIRQARALLALGRSEEGIRSL 434 Query: 284 EKIWKVNP 291 + +++P Sbjct: 435 KMALRLDP 442 >gi|213962696|ref|ZP_03390957.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena Capno] gi|213954691|gb|EEB66012.1| tetratricopeptide TPR_2 repeat protein [Capnocytophaga sputigena Capno] Length = 447 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 72/228 (31%), Gaps = 29/228 (12%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + +Y L L Y A L+ A+ L F +GD+ Sbjct: 121 ALTLTDDASNIYALIAMEYLYVEDYTNAKNYFIRCLEQDPQDYTALQQLVFCYEVLGDVQ 180 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A + LD +P + + Y+ ++ A+ L+ + + A A Sbjct: 181 EATSFLNHYLDQNPYCEVAWYYLGRLYLAIGDYKNALRCLDFAIISDDTFTG--AYFEKA 238 Query: 232 RSLENADKGDMIASYHDAIESLK----LCDNSIMASICAAKSLISQNKKRKAEVI----- 282 R LE + Y AIE+ K L D S +A + + + KAE Sbjct: 239 RVLEMMED------YEKAIENYKITLTLDDPSALAYLHIGRCYEKMHNDTKAEEYYFRAT 292 Query: 283 -----LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 L+K W +A+ Y + + LK ++ Sbjct: 293 HEDPQLDKAWIT-----LADFYYLRHNHSKA--LKYIQKVLTFEPNEP 333 >gi|197120079|ref|YP_002140506.1| glycosyltransferase [Geobacter bemidjiensis Bem] gi|197089439|gb|ACH40710.1| glycosyltransferase, TPR domain-containing protein [Geobacter bemidjiensis Bem] Length = 616 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 97/307 (31%), Gaps = 24/307 (7%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAA---HNIPLARKMHSYVSQQHTFHNEYLVYL 124 P L + A+ ++ + A K + + YL L Sbjct: 313 DPQRAAAALREHLARFPKHAMAHNDLAAVSYQLGEKEQALKHYREAVWLDPKESVYLKNL 372 Query: 125 LEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 I E + + A +L+ + +L +G A + +AL+I Sbjct: 373 --ADILFVEAGEADEAIAIYLKLLEQSPRDVETLLNLGIICESVGQPAEADSFYQRALEI 430 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P W A Q L + + A E + A RS E +GD+ Sbjct: 431 EP---WNQAARQQLTALRQR------TEEPQSAAAPEEDDLCAEDRYQRSQELVSQGDLD 481 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298 ++ + + L + A A Q K +A EK ++ P +A+ Sbjct: 482 GAFQELKQILSSYPDFAPAHNDLAVLAYQQGDKEQARAHYEKAAELAPENGTFQKNLADF 541 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-- 356 Y + + G + L +++E+L+ + KI + +A + + + P Sbjct: 542 YF-VEGYDVDGAIAIYLEQLRREPKNIETLMGLGKICTMLDRPTEAQSFYGKVINLEPWN 600 Query: 357 -RKEIFL 362 L Sbjct: 601 RDARDCL 607 >gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT 9303] gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT 9303] Length = 706 Score = 43.8 bits (102), Expect = 0.059, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 12/234 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A +++ +A Y+ +GD A KA+ I+P Sbjct: 398 GDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADYNKAIAINPQLAETYSN 457 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI N+ + ++ A + R + D D + D +++ Sbjct: 458 RGGIKRVLGNYQGAIADFNKAIEINPQY----APAYMNRGIAKYDLKDYQGAIADYSKAI 513 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTV 308 + +A + + + A L + ++N P+ A+ + T + Sbjct: 514 TINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEIN--PQFADAFNNRGATKYELGDHQ 571 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIF 361 G + + IN + E+ I +G+ A A A++I P + Sbjct: 572 GAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEIDPQYASAY 625 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 75/230 (32%), Gaps = 32/230 (13%) Query: 152 TREFAVYSLYF-------ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 T+ A+ S + D A KAL+I+P E K++ Sbjct: 307 TQALALRSSMRGYFLRAYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDY 366 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 AIT N+ E N R L + GD + D ++++L Sbjct: 367 QGAITDYNKAI----EINPQHTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQH----- 417 Query: 265 CAAKSLISQNKKRK-------AEVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLK 312 A + ++ +K A K +N P++A Y++ N G + Sbjct: 418 --AYAYYNRGIVKKNLGDYQGAIADYNKAIAIN--PQLAETYSNRGGIKRVLGNYQGAIA 473 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + EIN + + + ++ A A A+ I P+ I Sbjct: 474 DFNKAIEINPQYAPAYMNRGIAKYDLKDYQGAIADYSKAITINPQHAIAF 523 >gi|307256760|ref|ZP_07538539.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864808|gb|EFM96712.1| hypothetical protein appser10_7630 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 338 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 36/196 (18%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 31 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 90 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ L + + A A K + I P Sbjct: 91 SLTQLMTVYQKTKEWKKAINVAEKLIKIEP------------------------------ 120 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + A++++N D +++ A+E ASI ++QN+ Sbjct: 121 -DTDKIPLSHYYCEYAQAIKNEDLDGHLSALSKALE---YSPQCARASILLGDYYLAQNQ 176 Query: 276 KRKAEVILEKIWKVNP 291 + A E+I + +P Sbjct: 177 FQSALKNYERILQQDP 192 >gi|300864449|ref|ZP_07109320.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506] gi|300337593|emb|CBN54468.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506] Length = 293 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 44/144 (30%), Gaps = 14/144 (9%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 +L Q A + +L + A+ L + +A L Sbjct: 118 ILLAQAKEYAGDREGAAQAYRSVLTVAPGDVKALQGLVNLLLKQQRPEAAIGLLQDTLKA 177 Query: 184 ----------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 S D V + Q Y K + AI ++ K + R +L A++ Sbjct: 178 APAANQAKAGSVDVTSVQLILGQVYAEQKRFDEAIVIYDEGIK--ADAKDFRPVL--AKA 233 Query: 234 LENADKGDMIASYHDAIESLKLCD 257 + ++G + ++ +L Sbjct: 234 IVLREQGKTEDAEGLFNKATELAP 257 >gi|284051363|ref|ZP_06381573.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] Length = 270 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 64/218 (29%), Gaps = 30/218 (13%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 N M +Y N+ + Y Q+ ++ A + + + Y Sbjct: 51 NGQFIAAMGAYTKAFELAPNQPISYAYLAQVYRNMGWFDEAISFYQQAIDLSPNWADLHY 110 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L G++ A KA+ ++P + + + + AI L + + N Sbjct: 111 HLGMTWHWQGNIEGAIGCYQKAIALNPKLGEAYLDMALRLNERGDINTAIKVLQEGRINC 170 Query: 219 KEWNRN---------------RAILLIARSLEN---------------ADKGDMIASYHD 248 + AI + +L A +G + + Sbjct: 171 PNFKEIFNTLGYLQLQQNQIDEAIAIFQEALSIDPTEPLVYNNLGWAFARQGKLSEAIAA 230 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +++ L + +A K +N R+A +K Sbjct: 231 YHKAISLKPDLAIAYSNLGKLWQHKNNHRQAITYFQKA 268 >gi|254466985|ref|ZP_05080396.1| hypothetical protein RBY4I_3596 [Rhodobacterales bacterium Y4I] gi|206687893|gb|EDZ48375.1| hypothetical protein RBY4I_3596 [Rhodobacterales bacterium Y4I] Length = 571 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 81/284 (28%), Gaps = 40/284 (14%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY- 176 + + LLE + + A + + M + + + F +Y GD A+ Sbjct: 126 HPLVDGLLEGWAHIGTGSVSSALKTFDRMAEDSSLKPFVLYHRALALASAGDYGGAEALF 185 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---------------LNQKKKNAKEW 221 A + ++ + A VQ + A L+ + ++ K Sbjct: 186 AAEDGRLASLSRRAAVARVQILSQLGRNAEARETLQAAFGSRLDPGLEALDAQLRDGKTL 245 Query: 222 NRNRA---------ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 A + + N D + A + L + + A + +A L Sbjct: 246 AYTIAPGPREGIAEVFFTLGAALNGDTAN-DYVLMYARMAASLRPDHVDAILLSASLLDQ 304 Query: 273 QNKKRKAEVILEKIWKVNP--HPE-----IANIYTHLLSENTVGKLKRALRLEEINKESV 325 R + +K P HP+ + + ++ +L + Sbjct: 305 LG--RYELSV--ATYKQVPRSHPDYHAAELGRAEALRRAAKPDAAIEVLEQLARQFPQQP 360 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQ 366 V + + + A A+ P FLL A+ Sbjct: 361 GVYVSLGDLLRQQEDYAGAARAYDKALANTPEDDSSRWFLLYAR 404 Score = 37.6 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 2/187 (1%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 M++ ++ + + LL + +Y ++ + + + A Sbjct: 279 MYARMAASLRPDHVDAI-LLSASLLDQLGRYELSVATYKQVPRSHPDYHAAELGRAEALR 337 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R ++A + P P V ++ ++++ A ++ N E + +R Sbjct: 338 RAAKPDAAIEVLEQLARQFPQQPGVYVSLGDLLRQQEDYAGAARAYDKALANTPEDDSSR 397 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILE 284 LL AR + + + D SL L + + + ++K +A ++E Sbjct: 398 WFLLYARGICHERLNQWEQAEADFRASLALEPDRPQVLNYLGYSLVEKRSKLDEALNMIE 457 Query: 285 KIWKVNP 291 + P Sbjct: 458 RAVAARP 464 >gi|225431952|ref|XP_002272572.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296083248|emb|CBI22884.3| unnamed protein product [Vitis vinifera] Length = 651 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 64/230 (27%), Gaps = 20/230 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY----LLEVQIALAERQYNIAHEKLEMMLQIPATR 153 NI AR H +Y LLE + ++ A + + Sbjct: 262 GNIKKAR--HLLAKGLKYGGGNEYIYQTLALLEAKA----NRHEQARYLFKQATKCNPKS 315 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLAKEWSRAITFL 211 + + + + ++A++ KA+ SP + V + + + Sbjct: 316 CASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFAWHVWGVFEANLGNAD------VG 369 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K N +LL + +L S + +L I Sbjct: 370 RKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRRASELDPRHQPVWIAWGWMEW 429 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE 319 + A + ++ ++ E A E G L A RL Sbjct: 430 KEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAGNLSAARRLFR 479 >gi|87310263|ref|ZP_01092394.1| hypothetical protein DSM3645_27583 [Blastopirellula marina DSM 3645] gi|87287012|gb|EAQ78915.1| hypothetical protein DSM3645_27583 [Blastopirellula marina DSM 3645] Length = 830 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 106/314 (33%), Gaps = 40/314 (12%) Query: 91 GLMSIA----AHNIPLARKMHSYVSQQHTFHNEYLVYL---LEVQIALAERQYNIAHEKL 143 GL + A ++ A + + + + L L L Q + A L Sbjct: 5 GLQAAFQLHRAGDLAAAERTYRQILIDTSKDLNVLHLLGLNLHEQ-----GKDREAVVFL 59 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV----VQQY- 198 E ++I T SL +GDL A+ KA+ + + ++ Sbjct: 60 EKAVEIGPTIGVLYNSLGVVRMALGDLRVAESCFRKAISLDSVCEEARRNLAAVSLKLQG 119 Query: 199 ---------------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + +A L Q+ + + A + +AR ++G Sbjct: 120 QTSVPQSPMASSRSTAAIGDSEQAEQILRQRL--GEFPDDLNAYIELAR--HWMERGKTR 175 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YT 300 E ++ S+ + ++L +N+ +AE I ++ + P A+I + Sbjct: 176 EVIDLLSEPVERFPQSMELANRLGEALGRENRHDEAEKIFQRHLERFPESVTAHINYGVS 235 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L E T + R E+N E + ++ + D A A+++ P Sbjct: 236 QLAQERTSQAVSSFERALELNPECFRAQFLIGIAWRQSQQYDAAEMALQKALELQPGSSE 295 Query: 361 FLL-LAQIEQANSH 373 L+ LA +E+ + Sbjct: 296 ALVELAHLERLRGN 309 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 87/280 (31%), Gaps = 34/280 (12%) Query: 131 LAERQYNIAHEKLEMMLQ-IPAT-REFAVYSLY-FESCRIGDLNSAQRYATKALDISPDA 187 LA+ + + A E L+ P R + + +S + A + KAL++ P + Sbjct: 237 LAQERTSQAVSSFERALELNPECFRAQFLIGIAWRQSQQYDAAEMALQ---KALELQPGS 293 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + L + + L + + L+ + D Sbjct: 294 SEALVELAHLERLRGNLQKGLETLTAIL----DRDPCHGPALLGLATCCETLSDPDLVVQ 349 Query: 248 DAIESLKLCDNSIMASIC-------------AAKSLISQNK--KRKAEVILEKIWKVNPH 292 +++LK A + A+ +++ + +A + L K P Sbjct: 350 YCVKALKANAKFAPAHLLLGMVLASRLTPDKRARLELAEREELGERALLHLSSAAKFAPS 409 Query: 293 PEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 E + + L + + + + +I LE G ID A A Sbjct: 410 AEAMEAWGSALINMGRHAEALGKIEESIRLVPVFAPAHESLGRIYLEQGRIDDACAAFSA 469 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNT-----DKILYWTQSA 385 A+++ PR+ + ++ ++ + ++ Sbjct: 470 AVRLDPRRALAQF--ELARSKKVDDVPRSIQQVRALLARG 507 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 59/216 (27%), Gaps = 22/216 (10%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + A + +E LV L + E L +L A Sbjct: 273 SQQYDAAEMALQKALELQPGSSEALVEL--AHLERLRGNLQKGLETLTAILDRDPCHGPA 330 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVT-----------EAVVQQYVLA 201 + L + D + +Y KAL +P + A ++ Sbjct: 331 LLGLATCCETLSDPDLVVQYCVKALKANAKFAPAHLLLGMVLASRLTPDKRARLELAERE 390 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + RA+ L+ K A A + G + ES++L Sbjct: 391 ELGERALLHLSSAAKFAPSAEAMEA-----WGSALINMGRHAEALGKIEESIRLVPVFAP 445 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 A + + Q + A +++P +A Sbjct: 446 AHESLGRIYLEQGRIDDACAAFSAAVRLDPRRALAQ 481 >gi|262304945|gb|ACY45065.1| acetylglucosaminyl-transferase [Aphonopelma chalcodes] Length = 289 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ + H + L L I + A + + P A Sbjct: 34 GLVTEAEECYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALEVFPEF-AAA 90 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G LN A + +A+ ISP + + A+ ++ + Sbjct: 91 HSNLASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQ 150 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 151 INPAF----ADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCL 200 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + A N + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVTEAEECYNTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGFIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMGDIQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%) Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + AL + P + A + + E+ A Sbjct: 39 AEECYNTALRLCPTHADSLNNLANIKREQGFIEEATRLYLKALEVFPEF----AAAHSNL 94 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 + +G + + E++++ A +L + A + ++NP Sbjct: 95 ASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYSRAIQINPA 154 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 H +A+I H S N + ++ + ++ ++ Sbjct: 155 FADAHSNLASI--HKDSGNIPEAIASYRTALKLKPDFPDAYCNLA 197 >gi|170032363|ref|XP_001844051.1| mitochondrial precursor protein import receptor [Culex quinquefasciatus] gi|167872337|gb|EDS35720.1| mitochondrial precursor protein import receptor [Culex quinquefasciatus] Length = 575 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 1/123 (0%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAV 157 L + M ++ F + Y L Q+ +++Y+ A E + P + V Sbjct: 413 EGALMKVMRAFREAIDRFPDCVECYSLMAQVLSDQQEYHEADNFFEKATKIEPENAQILV 472 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + GD+ SA + KA+ I + E + V + AI + Sbjct: 473 HKALLQLQWKGDVESAVQLIEKAIAIDDKCEFAYETLGTIQVQRGKLQEAIKLFESAIQL 532 Query: 218 AKE 220 AK Sbjct: 533 AKT 535 >gi|162453991|ref|YP_001616358.1| TPR domain-containing protein [Sorangium cellulosum 'So ce 56'] gi|161164573|emb|CAN95878.1| TPR domain protein [Sorangium cellulosum 'So ce 56'] Length = 310 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 4/156 (2%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 L + + + L +L+ +I LA R+ + A E E + + + L Sbjct: 56 RLGAALIEAQTARGLAPESPLAHLVLGRILLAHRRPSEAREHFETARGLDPSEPAPLRGL 115 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + A T+AL++ PD A+ ++ A + + A E Sbjct: 116 AAVERYQDRDDRAAELLTQALELDPDDIETLVALGDAHLARGRVDEA----ERWARAALE 171 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 A L+ +GD+ + A+ +++ Sbjct: 172 AEPEHADALVLMGHVLLRRGDVSGAREHAVWAIRAD 207 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 6/154 (3%) Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW---KVNPHPEIANIYT 300 A+ +A + L S +A + + L++ + +A E P P Sbjct: 59 AALIEAQTARGLAPESPLAHLVLGRILLAHRRPSEAREHFETARGLDPSEPAPLRGLAAV 118 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + + + E++ + +E+LV + L G +D+A A A++ P Sbjct: 119 ERYQDRDDRAAELLTQALELDPDDIETLVALGDAHLARGRVDEAERWARAALEAEPEHAD 178 Query: 361 FLLLAQIEQANSHNTDKILY---WTQSALHAMPD 391 L+L + W A + PD Sbjct: 179 ALVLMGHVLLRRGDVSGAREHAVWAIRADVSDPD 212 >gi|120612096|ref|YP_971774.1| type 12 methyltransferase [Acidovorax citrulli AAC00-1] gi|120590560|gb|ABM34000.1| Methyltransferase type 12 [Acidovorax citrulli AAC00-1] Length = 436 Score = 43.8 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 66/210 (31%), Gaps = 41/210 (19%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + +A LN+ ++ R + L G++ ++ ++ L Sbjct: 21 QIARGDLQQAALTLNKAQRTQPNDPRVFMLA----GLMAEKAGNIPKAFDGLRRAVTLAP 76 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----------------HPEIANIY- 299 + + A QN+ R+A + EK+ P H E+A + Sbjct: 77 DWGPGQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVVDIAHRAGHLEMAVRHL 136 Query: 300 ---THLLSENTVGKLKRALRLEEI----------------NKESVESLVIVSKIALEMGS 340 ++ + + A L ++ N + E+ + K + G+ Sbjct: 137 RRGLEMVPGDVQLRRLLARDLSDLGQHAESLQVWGALIDENPQDTEARLGRVKACIAAGT 196 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 QA A M++AP + I Sbjct: 197 PAQAVADTTALMELAPGDSVVAYYTAIAHG 226 >gi|218248025|ref|YP_002373396.1| family 2 glycosyl transferase [Cyanothece sp. PCC 8801] gi|218168503|gb|ACK67240.1| glycosyl transferase family 2 [Cyanothece sp. PCC 8801] Length = 1252 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 45/263 (17%), Positives = 91/263 (34%), Gaps = 31/263 (11%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 A E +L ++Y L + +IG+ + A++ L + P + Sbjct: 638 ANDLTGAKEAYNRILARETKHPDSLYGLGVLAHQIGEFDYAEQLFNDLLKVQPKSAKAWM 697 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ Y K++S+AI Q N + + + ++ Sbjct: 698 SLGNLYQEKKQFSQAINAYQQAL----FLEPNLVAVYNNLGYVLQQQSQWEEAISCYQKA 753 Query: 253 LKLCDNSIMASICAAKSLISQNK------KRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 L++ N + A I A L SQNK + A++ L+ K +A Sbjct: 754 LEIQPNCVEAEINLANVLHSQNKLPPEQQIQYAQLNLQLGIKQEQQGNLATA-------- 805 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLA 365 ++ + ++ ES E + + G +++A A A+ + P++ + L Sbjct: 806 ----IECYQQGIKLQPESAEIYHNLGVAWQKQGKLEEAIAAYQNALDLNPQQGKTYFSLG 861 Query: 366 QIEQANSHNTDKILYWTQSALHA 388 QI Q + + A A Sbjct: 862 QIYQVQNQ--------LKKASSA 876 >gi|83646794|ref|YP_435229.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396] gi|83634837|gb|ABC30804.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396] Length = 378 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 8/177 (4%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A ++ V Q + E L ++ +L + A + + M+Q Sbjct: 175 DFDKAIRVAEEVLAQEPDNAEALG--VKAYCSLNALDLSTAAQSFDAMIQAKPKSGRGWV 232 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + GDL +A+ K L+ P + +L A L + + Sbjct: 233 GKGLLEMQQGDLAAAEGALKKGLENMPGHIGSWNVLAWCQILQGRMQEAEESLRRASEID 292 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + L + ++L + D + A ++ +L +S A++L Q + Sbjct: 293 DRFGETYGALAVIKALTH----DYAEARLLARKATRLDKDSFSG--HFARALCDQGE 343 >gi|83720331|ref|YP_441035.1| TPR domain-containing protein [Burkholderia thailandensis E264] gi|83654156|gb|ABC38219.1| TPR domain protein [Burkholderia thailandensis E264] Length = 606 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 9/246 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180 +L ++AL A++ + + A + + + D +A + Sbjct: 80 QVLAAEVALQRNLPAPAYQTYLALARDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 138 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 SPD+ + VL + + A L Q+ A NR +AI+ + L A Sbjct: 139 --YSPDSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDNRGQAIIALQALL--ARGP 194 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + + LK N A + A+ ++ + K A L++ ++ P A + Sbjct: 195 NRVGGLTVLQDLLKNDMNRPEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 254 Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + + + N +S + + ++++ L +D A + AM+ + Sbjct: 255 SQMGPGERAAGIASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQF-DAMRRNDSSD 313 Query: 360 IFLLLA 365 L+A Sbjct: 314 PTPLMA 319 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 78/242 (32%), Gaps = 43/242 (17%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q+ LA+ + + A ++ + M + ++ + ++ + L+ A Y + + Sbjct: 283 RLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVK 342 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++ +KK + + L + D+ + Sbjct: 343 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNNE 369 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEI 295 + + + + A + A+ L Q K +A +L + +PH + Sbjct: 370 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQVSDPHDAAVIARTDA 429 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++ + +L +A E + + + ++G + L M+ Sbjct: 430 SILFASRRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRAQ 486 Query: 356 PR 357 P Sbjct: 487 PD 488 >gi|315633769|ref|ZP_07889059.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter segnis ATCC 33393] gi|315477811|gb|EFU68553.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter segnis ATCC 33393] Length = 1520 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 74/251 (29%), Gaps = 33/251 (13%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWV--------TEAVVQQYVLAKEWSRAITFLNQ 213 E+ RI A R A +A +A ++ +AKE A Sbjct: 943 IEAERIAKEKEAARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEDARLAEEA 1002 Query: 214 KKKNAK--EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----- 266 +++ E R LE A E+ + + A A Sbjct: 1003 RQRELARLEAERIAKEKEEQARLEAERIAKEKEEARLAEEARQRELARLEAERIAKEKEE 1062 Query: 267 -AKSLISQ-NKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-------TVGKLKRALRL 317 A+ + K+++ + E+ + E+A + +++ ++ + Sbjct: 1063 QARLEAERIAKEKEEARLAEEARQ----RELARLEAERIAKEKEEQARLEAERIAKEKEA 1118 Query: 318 EEINKESVESLVIVSKIA-LEMGSIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH 373 + +E+ + + + + +QA +A K + + + E+A Sbjct: 1119 ARLAEEARQHELARLEAERIAKEKEEQARLEAERIAKEKEEQARLEAERIAKEKEEARLA 1178 Query: 374 NTDKILYWTQS 384 + Sbjct: 1179 EEARQRE-LAR 1188 >gi|218661993|ref|ZP_03517923.1| TPR repeat-containing protein [Rhizobium etli IE4771] Length = 592 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 10/154 (6%) Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G+ ++ AIE + A++ A + Q + ++A+ ++ ++P +IA Sbjct: 18 ANGEAEKAFKKAIELDPQDP-LLRANL--AILYLDQGRMKEAKREIDTAIALDPSFDIAL 74 Query: 298 IYTHLLSENTVGKLKRALRLEEI---NKESVESLVIVSKIALEMGSI---DQAHAKAMLA 351 + T + K L N +S ++++ E G QA A Sbjct: 75 LARGRYYLQTGDRDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRL 134 Query: 352 MKIAPRKEIFLLLAQIEQAN-SHNTDKILYWTQS 384 K P F I+ + + + Sbjct: 135 DKNDPVISAFRTAVDIDDYDADGAIRNAQEYLRR 168 Score = 43.4 bits (101), Expect = 0.079, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 52/159 (32%), Gaps = 6/159 (3%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A + K A E + +L ++ D+G M + + ++ L + +A + Sbjct: 16 RDANGEAEKAFKKAIELDPQDPLLRANLAILYLDQGRMKEAKREIDTAIALDPSFDIALL 75 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEIN 321 + + + KA L NP + + ++ L + ++ Sbjct: 76 ARGRYYLQTGDRDKALQDLLAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLD 135 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 K ++ + A+++ D A A + R Sbjct: 136 KNDP--VISAFRTAVDIDDYD-ADGAIRNAQEYLRRSRA 171 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 6/151 (3%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A + + +++ +L G + A+R A+ + P A + Sbjct: 21 EAEKAFKKAIELDPQDPLLRANLAILYLDQGRMKEAKREIDTAIALDPSFDIALLARGRY 80 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y+ + +A+ L A + ++L A E D+ + +A K Sbjct: 81 YLQTGDRDKALQDLLAA-STANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLDKNDP 139 Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEK 285 A + R A+ L + Sbjct: 140 VISAFRTAVDI--DDYDADGAIRNAQEYLRR 168 >gi|154249690|ref|YP_001410515.1| TPR repeat-containing protein [Fervidobacterium nodosum Rt17-B1] gi|154153626|gb|ABS60858.1| Tetratricopeptide TPR_2 repeat protein [Fervidobacterium nodosum Rt17-B1] Length = 359 Score = 43.8 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 64/186 (34%), Gaps = 12/186 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVT 191 E A + L +++ YS+ E+ IG+ A Y K + ISP + Sbjct: 145 EGDIEGAIKYLNRSIELDPW-LIQSYSMIGEAYYNIGNYEKAVEYWEKEIAISPSNTFTY 203 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEW-NRNRAILLIARSLENADKGDMIASYHDAI 250 + Y + +AI L + ++ ++ + + R N +K S I Sbjct: 204 FMISDAYTKIGKLEKAIEILEKYREESENSIIALYELAELYRKKGNEEKAKEYESLIMEI 263 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPE--IANIYTHLLSE 305 + K N I AK + + K ++E K NP H +A Y Sbjct: 264 DPQK-DPNGIE---IWAKVHLKKGNYDKVISVIENAIKANPEAKHLNLVLAVAYVKTNQI 319 Query: 306 NTVGKL 311 ++ Sbjct: 320 EKARRV 325 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 88/268 (32%), Gaps = 38/268 (14%) Query: 140 HEKLEMMLQIPATREFAVYSL----YFESCRIGDLNSAQRYATK------------ALDI 183 E ++ Y L + G A YA K A+ + Sbjct: 68 ELVYEPIVWTEVKEFLEKYGLTPENMLHATADGLYELAIEYADKNQIEVAKDILKFAMRL 127 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + E + + AI +LN+ + + ++ +I + + G+ Sbjct: 128 DKNYAPAYEFFGSLLLEEGDIEGAIKYLNRSIE--LDPWLIQSYSMIGEA--YYNIGNYE 183 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------EIAN 297 + + + + ++ + + K KA ILEK ++ E+A Sbjct: 184 KAVEYWEKEIAISPSNTFTYFMISDAYTKIGKLEKAIEILEK-YREESENSIIALYELAE 242 Query: 298 IYTHLLSENTVGKLKRALRL-----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y +E K K L + + +E I +K+ L+ G+ D+ + A+ Sbjct: 243 LYRKKGNE---EKAKEYESLIMEIDPQKDPNGIE---IWAKVHLKKGNYDKVISVIENAI 296 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILY 380 K P + L+ + ++ +K Sbjct: 297 KANPEAKHLNLVLAVAYVKTNQIEKARR 324 >gi|329957249|ref|ZP_08297769.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] gi|328522962|gb|EGF50065.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056] Length = 319 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 85/231 (36%), Gaps = 10/231 (4%) Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + + A + E + L + + + A++ K I P+ Sbjct: 37 AQRMGRADYAIKCFTEALALQEDFETMGY--LAQVYIQSNEPDEARKLLEKMTQIEPEHT 94 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + ++++ +K A E A L+ ++ + G M ++ Sbjct: 95 STFLTLANVCYMQEDYAA--MAEAAQKAIAIEEGSAMAHYLLGKADNGQNDGIMCIAHLT 152 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-HLLSENT 307 +++ L D+ A + A++L + ++A ++ + +P E A + + Sbjct: 153 --KAIVLKDDFTEARLLRAEALTKMRQYKEAMEDIDAVLAQDPDDESAILLRGKIKEATG 210 Query: 308 VGKLKRALRL--EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 A L E+N + ++ + + ++ + + +A A A+++ P Sbjct: 211 AEAEAEADYLHITELNPFNEQAFLYLGQLYIVQKKLTEAIALFDEAIELNP 261 >gi|257140312|ref|ZP_05588574.1| TPR domain-containing protein [Burkholderia thailandensis E264] Length = 604 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 9/246 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180 +L ++AL A++ + + A + + + D +A + Sbjct: 78 QVLAAEVALQRNLPAPAYQTYLALARDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 136 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 SPD+ + VL + + A L Q+ A NR +AI+ + L A Sbjct: 137 --YSPDSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDNRGQAIIALQALL--ARGP 192 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + + LK N A + A+ ++ + K A L++ ++ P A + Sbjct: 193 NRVGGLTVLQDLLKNDMNRPEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 252 Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + + + N +S + + ++++ L +D A + AM+ + Sbjct: 253 SQMGPGERAAGIASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQF-DAMRRNDSSD 311 Query: 360 IFLLLA 365 L+A Sbjct: 312 PTPLMA 317 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 78/242 (32%), Gaps = 43/242 (17%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q+ LA+ + + A ++ + M + ++ + ++ + L+ A Y + + Sbjct: 281 RLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVK 340 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++ +KK + + L + D+ + Sbjct: 341 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNNE 367 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEI 295 + + + + A + A+ L Q K +A +L + +PH + Sbjct: 368 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQVSDPHDAAVIARTDA 427 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++ + +L +A E + + + ++G + L M+ Sbjct: 428 SILFASRRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQYTTMEQQLRLLMRAQ 484 Query: 356 PR 357 P Sbjct: 485 PD 486 >gi|260829275|ref|XP_002609587.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae] gi|229294949|gb|EEN65597.1| hypothetical protein BRAFLDRAFT_87801 [Branchiostoma floridae] Length = 738 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 14/204 (6%) Query: 196 QQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + +S AI + ++ + ++ SL + + +SL Sbjct: 520 RLQHDQGRYSEAIETYMEAIRRRPSHYAPQSLYNMLGESL--FKNSQLAEAEEWFKKSLA 577 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTH-LLSENTV 308 + + A + AK + N+ +AE++ +K + H SE Sbjct: 578 AKPDHVPAHLTYAKLMAKTNRAAEAELMYQKAMELDSNSATVHQHYGQYMAETGRSEEAA 637 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 + +A E+ E++ + + G + A A ++ P + L I Sbjct: 638 DMMVKA---VELGSPEFETIFNAANALRQAGRHEDAEKYYKQATQLKPEVASAHMNLGAI 694 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 N + + AL PD Sbjct: 695 LHLNGKYVEAETSYL-RALELKPD 717 >gi|158333792|ref|YP_001514964.1| hypothetical protein AM1_0600 [Acaryochloris marina MBIC11017] gi|158304033|gb|ABW25650.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017] Length = 367 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 78/223 (34%), Gaps = 11/223 (4%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Q + A + ++++ A L R + A + K ++I+P + Sbjct: 125 GQNDQAAAAYQKVIELEPKNVRAYEGLAVIYSRQQKYDEAFQNFQKVIEINPKNGGAYNS 184 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++ + A+T L + + + + L +A + + G +++ Sbjct: 185 IGLIHLKRNQVEPAVTNLEKAATLSPKNGEIQMNLALAYAAQ----GKTEEGLVALDKAV 240 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIYTHLLSENTV 308 KL + + + L SQ +A ++ + H + ++ + + + Sbjct: 241 KLDPRNPKVHLRTGQLLQSQGNNERAITAYKQALRHDKNLGAAHEGLGDVL--MQKGDAL 298 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 G + + ++ K + + ++K + +A + A Sbjct: 299 GAVVAFRQATKLEKRNPSAFYKLAKALIARNRHREAIPELHKA 341 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 1/125 (0%) Query: 93 MSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 +++A A + + V+L Q+ ++ A + L+ Sbjct: 219 LALAYAAQGKTEEGLVALDKAVKLDPRNPKVHLRTGQLLQSQGNNERAITAYKQALRHDK 278 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A L + GD A +A + P + + + AI L Sbjct: 279 NLGAAHEGLGDVLMQKGDALGAVVAFRQATKLEKRNPSAFYKLAKALIARNRHREAIPEL 338 Query: 212 NQKKK 216 ++ ++ Sbjct: 339 HKARQ 343 >gi|120602594|ref|YP_966994.1| TPR repeat-containing protein [Desulfovibrio vulgaris DP4] gi|120562823|gb|ABM28567.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris DP4] Length = 562 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GDL +A R A + + P+ E Q V A+ +++ + Sbjct: 359 EKGDLEAALRTAREGRETFPEQRDFREMEAQLLVNMGRSEEALRVIDKAADRWPD----D 414 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILE 284 + LL R+L D+G A++ E +K + A +L Q +A +LE Sbjct: 415 SGLLFMRALILDDRGAKDAAFAAMEEVIKASPDHAQALNYVGYTLAEQERDLTRAVSLLE 474 Query: 285 KIWKVNP-HP----EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++P +P +A Y + RA+ L + E IA M Sbjct: 475 RANTLSPDNPFILDSLAWAYFKAGRMPEAWKAISRAIELNAPDPIIWEHY---GDIATAM 531 Query: 339 GSIDQAHAKAMLAMKIAP 356 G + A A+ + P Sbjct: 532 GQKNTARRAYRKALSMNP 549 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 30/241 (12%) Query: 155 FAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L ES D A A A P + + Q V + + A Sbjct: 113 LGLTLLLAESYLDLDRNDEAIALLRAYNA--KHPKDDEARQELAQLLVKTRRYEEA---- 166 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 K + ++L + + + +++K + + A A Sbjct: 167 -DKLILSIGETSRTSLLRYYHARALMGLNRLTEATAQLRKAVKASPDFLEAWAELAYVYE 225 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIA------NIYTHLLSENTV--GKLKRALRLEEINKE 323 + +AE I E+ +A +++ L++ N +K L E Sbjct: 226 LRKNYVEAEKIYEQ--------ILALDEGNQDVWLRLVAINIKLNNPVKAYE-LARQGPE 276 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYW 381 + ++ + + L+ +QA +LA+K +P +E++ LA + +TD L W Sbjct: 277 TFGFMLTAATLFLDDRFFEQA-EGLLLAVKDSPGAPEEVYFFLAVLAYEGQRDTDATLSW 335 Query: 382 T 382 Sbjct: 336 L 336 >gi|157135487|ref|XP_001663464.1| smile protein [Aedes aegypti] gi|108870211|gb|EAT34436.1| smile protein [Aedes aegypti] Length = 683 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y++ + GD +A ++ +AL++ P+ + Y AK++ RA+ L + + Sbjct: 430 HYNIAKLAADQGDKATAFQFYQQALELYPEYEVAHMNLGNLYSDAKDYRRALKHLQKAIE 489 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 ++++ L I + + D + SY A++ K N Sbjct: 490 YHEDFHTAWMNLGIVHAA-LKNHKDALVSYQRAMKGKKHYPN 530 >gi|56755980|gb|AAW26168.1| SJCHGC02873 protein [Schistosoma japonicum] Length = 708 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 5/142 (3%) Query: 94 SIAAHNIPLARKMHSYVSQQ-HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPA 151 ++ + +I + + N Y L QI + + + ++ P Sbjct: 530 ALTSGDISKVDSRIEEFRRLVKKYPNCLETYSLFAQILSERGDFQESDKIFADLINLSPD 589 Query: 152 TREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + A L + D ++A Y + + P + E + Q V ++ A+ Sbjct: 590 SGLAYAHRGLLQLKWKQ-DRDAALSYFIEGIKKDPKCELIHELLGQLSVEKGQFIDALKH 648 Query: 211 LNQKKKNAKEWNRNRAILLIAR 232 N K AK N + A L+ R Sbjct: 649 FNLAIKQAKTQN-DLAHLIALR 669 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 88/265 (33%), Gaps = 17/265 (6%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFESCRIG--DLNSAQRY--A 177 LL + A E+ + + + V +L +C D + A Sbjct: 412 LLHATYQALAGRSEEAKERFQNIGAPDSGASLVVRVNALIKSACLSMSVDQDVASCLYDF 471 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILLIARSL 234 +A + P + Q +LA + A+ LN K E+ R L +L Sbjct: 472 QRAQSAWSECPDIYLHRGQINLLADQLDEALHDLNTAVKLKPEFSVAQAQRLYTLYRCAL 531 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + D + + + +K N + A+ L + ++++ I +N P+ Sbjct: 532 TSGDISKVDSRIEEFRRLVKKYPNCLETYSLFAQILSERGDFQESDKIFAD--LINLSPD 589 Query: 295 IANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 Y H ++ L + + + + ++ ++++E G A Sbjct: 590 SGLAYAHRGLLQLKWKQDRDAALSYFIEGIKKDPKCELIHELLGQLSVEKGQFIDALKHF 649 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSH 373 LA+K A + L + + + Sbjct: 650 NLAIKQAKTQNDLAHLIALREGVNA 674 >gi|71281690|ref|YP_269096.1| TPR domain-containing protein [Colwellia psychrerythraea 34H] gi|71147430|gb|AAZ27903.1| TPR domain protein [Colwellia psychrerythraea 34H] Length = 743 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 16/192 (8%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYS 159 A +M L L +VQ A ++ + Sbjct: 535 KAIRMEVA----RVLAAVPLEQLPKVQAQQLAN----AQNNYIISQLVNNDTANS--HQN 584 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++ A++ KAL I+ + Y + S+A L K Sbjct: 585 LALFYAKQGQISKAEQLYKKALSINTKFVPAMVNLADLYRQTGKDSQATVLLFNAVKVMP 644 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E A+ A L+ + +MI + + L N A +L + N+ +KA Sbjct: 645 E----NAMAQFALGLQQVRQKNMIVAIKHLQIAAGLSPNLPYYHYVYAVALDTNNETKKA 700 Query: 280 EVILEKIWKVNP 291 V+LE +VNP Sbjct: 701 VVVLENSLRVNP 712 >gi|304321043|ref|YP_003854686.1| hypothetical protein PB2503_07434 [Parvularcula bermudensis HTCC2503] gi|303299945|gb|ADM09544.1| hypothetical protein PB2503_07434 [Parvularcula bermudensis HTCC2503] Length = 392 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 85/292 (29%), Gaps = 55/292 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-------QYNIAHEKLEMMLQIPAT 152 + + + + F + L+ L +A +K L I + Sbjct: 57 GRALQGLRKFKDALNCFLQAAQIDPLQPSAHLMAGICAFVVPDLPLAEKKFRTTLDIDSK 116 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A L R GD N A+ + KAL I+P+ + + + AI L Sbjct: 117 SSAAHVGLSQVLVRNGDNNQAREHLDKALRINPEMSMAVILKARLDLKDGDADSAIIQLQ 176 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC---AAKS 269 + + N A + + ++ + ++ ++ +I + Sbjct: 177 DQVRRTP--NNRTAEFALIGAYMQDERWQEAEALLS-----RMVSDNPNDAIMHGLLGRV 229 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESL 328 + + + A E+ ++ P +S N + L R L+ + + Sbjct: 230 RVKRGDFKGA----EEAYRQAP-----------VSHNRIQNLARNVQMLDALVPQ----- 269 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 G ++A K+ P LA I + K Sbjct: 270 ----------GKYEEARKILSQVPKMGP-------LAAIVNTRYGDVYKAEG 304 >gi|254514412|ref|ZP_05126473.1| putative sulfotransferase [gamma proteobacterium NOR5-3] gi|219676655|gb|EED33020.1| putative sulfotransferase [gamma proteobacterium NOR5-3] Length = 530 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 23/206 (11%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ A +A + E + + + A Q + + A Sbjct: 2 AQHSADQANWLRSTLREGFE-----RLQRGDQAGAANCCRQVLERKPDL----AEGHFLV 52 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + D + KL A A+ + + + +AE L K H Sbjct: 53 GMIALNADDSRTAIQGFGSVTKLQPKHSGAWAQLARLFMRRGQVNRAEDALAKA---VAH 109 Query: 293 PE--------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + IA +YT L + + + + + ++ L+ + + MG A Sbjct: 110 ADDNPMVQDTIATVYTLLGNAEAASQWQ--EKALARHPNNIGFLINRANNQMFMGDFTGA 167 Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQ 369 ++ A+ + PR L++ +E+ Sbjct: 168 RSRLESALTLNPRHANTHWLMSSLEK 193 >gi|209527035|ref|ZP_03275551.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] gi|209492546|gb|EDZ92885.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328] Length = 1038 Score = 43.8 bits (102), Expect = 0.062, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 20/142 (14%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-- 214 V + R G A KA+ P W + + +++W A+ + Sbjct: 6 VRG--NQLLRSGKPEEAVDAFRKAIAHHPHFHWSHYKLGEALEHSEDWLNAVAAYQKAVE 63 Query: 215 -KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKS 269 K N+ ++ A+ L+ A++ LK + + K Sbjct: 64 LKSNSIRYHYQLAVALV-----------ETEQIDAALDVLKAGLDLEPSGSDYYHLLGKC 112 Query: 270 LISQNKKRKAEVILEKIWKVNP 291 L + + ++A +K ++NP Sbjct: 113 LAEKEQWQEAIAHYQKALEINP 134 >gi|325298672|ref|YP_004258589.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] gi|324318225|gb|ADY36116.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] Length = 488 Score = 43.8 bits (102), Expect = 0.063, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 7/163 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 V LL ++AL + A E + P + R+ N A + KA Sbjct: 103 VRLLYTELALIQGDAEKAKCLFEQCYEENPYIETLFDIGQLYLDYRMK--NEAYPWILKA 160 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 P+ P E + +++ W A L + + +N + + L S + +G Sbjct: 161 FKQEPENPEAIELMASFQYMSENWPEAEK-LYNRLLDEFPYNTDTWLNL---SKCHYQQG 216 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + +L + D S+ A A + + KA L Sbjct: 217 QIEQAIEALDFALAIDDTSLFARELKAHCYLDLGESEKALQCL 259 >gi|294507597|ref|YP_003571655.1| hypothetical protein SRM_01782 [Salinibacter ruber M8] gi|294343925|emb|CBH24703.1| putative TPR-repeat protein [Salinibacter ruber M8] Length = 1064 Score = 43.8 bits (102), Expect = 0.063, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 18/214 (8%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +A +A AP + + + + L++ ++ R R Sbjct: 110 DAATAFATFRQAHASHVAAPQALYLEARAALAQGDDAGTRRLLSRLQREYPSHPRARTAR 169 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKKRKAEVILE 284 L + D+G+ + ++++ + A ++ +Q A + Sbjct: 170 L-GLAQYYLDQGNPDRAKSQ-LQTIATAPSRPDEGARALYLLGRTEQNQGNPNAALPYFK 227 Query: 285 KIWKVNPHPEI--ANIYTHLLSENTVGKLKR----ALRLEEINKESVESLVI---VSKIA 335 +++ P+ E+ A +Y +++ + + R RL E +S S + + ++ Sbjct: 228 QVYSRYPNAELAPAALYARGVTQVRLERYDRATASFERLGEQFPDSPFSENLGTILGEVY 287 Query: 336 LEMGSIDQAHAKAM---LAMKIAPRKEIFLLLAQ 366 +G + A + + + R LL + Sbjct: 288 YRVGQYENAATELQRRLPDLTGSTRARTLFLLGE 321 >gi|307263382|ref|ZP_07544998.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871260|gb|EFN02988.1| hypothetical protein appser13_7990 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 391 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 84 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 204 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 259 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 318 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341 >gi|190150049|ref|YP_001968574.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915180|gb|ACE61432.1| hypothetical protein APP7_0780 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 398 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 91 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 266 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 325 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348 >gi|165976153|ref|YP_001651746.1| tetratricopeptide repeat protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876254|gb|ABY69302.1| predicted N-acetylglucosaminyl transferase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 398 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 91 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 150 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 151 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 210 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 211 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 266 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 267 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 325 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 326 HRFIHYQ--INEAEEGRAKESLMLL 348 >gi|78358046|ref|YP_389495.1| response regulator receiver domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220451|gb|ABB39800.1| response regulator receiver domain protein (CheY-like) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 451 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 7/132 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 LI + +G+ + A + L++ NS + + K KA E+ + Sbjct: 158 LIDAAKALVAQGNFETALKAARKILEVKPNSAAGYLVMGDAWQGLGKLDKARESFEQASE 217 Query: 289 VN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 P ++A H L+ + +L+ RL++++ +VE V + +I +E+G+ ++ Sbjct: 218 HANLYMEPLKKLAE--LHKLTGDMNERLRYLERLDQLSPLNVERKVDMGEIHVELGNEER 275 Query: 344 AHAKAMLAMKIA 355 A A++ A Sbjct: 276 AEELFETAVQQA 287 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 5/132 (3%) Query: 133 ERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 R + A + L T L R G A KAL I+PD Sbjct: 308 SRDPHKAEKYYRQALDAKGSHLDHTDIATFNRLGIALRRQGKWQQAIEEYEKALHITPDD 367 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P + + Y +++ +A + + + ++ + L + + + Sbjct: 368 PNLMYNMSMAYAEGRQFDKACSIVMRIRQITPSFGSMDKTLSYNMGIIFSRGRQPADARV 427 Query: 248 DAIESLKLCDNS 259 +L+L + Sbjct: 428 LFENALRLDPSF 439 >gi|307249950|ref|ZP_07531922.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858010|gb|EFM90094.1| hypothetical protein appser4_7460 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 391 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 84 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 204 SKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 259 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 318 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341 >gi|170094074|ref|XP_001878258.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646712|gb|EDR10957.1| predicted protein [Laccaria bicolor S238N-H82] Length = 793 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 13/251 (5%) Query: 135 QYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y A + + + R VYS + S A + L+I+P +P Sbjct: 516 DYASAERAFKAVRALEPHRLWDMEVYSTLLWHLQRNVELS--FLAQELLNINPQSPQAWI 573 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ + L KE +A+T + + A E+ D+ D+ + + + Sbjct: 574 AIGNLFSLQKERLQALTCFRRAGQLDPT----CAYAFTLSGHESIDE-DLEKAINFFQSA 628 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-- 310 L+ A + +K R AE K +++P+ + + + + Sbjct: 629 LRADPRHYNAWYGLGTCYLRMSKIRLAEYHYRKAVEIHPNNAVLLGCVGMAVDRRGDRDA 688 Query: 311 -LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIE 368 L + ++ +KI + M ++A + P + + LA++ Sbjct: 689 ALALFDEAVRLAPDNALVRYRRAKILVSMRKYERAVEDLVSLRNSTPEESNVVFQLAKVY 748 Query: 369 QANSHNTDKIL 379 + + Sbjct: 749 RLLGDEVNSAK 759 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 167 IGDLNSAQRYATKALDISPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 DL A + AL P W + I + A E + N Sbjct: 615 DEDLEKAINFFQSALRADPRHYNAWYGLGTCYLRMSK------IRLAEYHYRKAVEIHPN 668 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+LL + +GD A+ E+++L ++ + AK L+S K +A L Sbjct: 669 NAVLLGCVGMAVDRRGDRDAALALFDEAVRLAPDNALVRYRRAKILVSMRKYERAVEDLV 728 Query: 285 KIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 + P ++A +Y L E + A L S +S Sbjct: 729 SLRNSTPEESNVVFQLAKVYRLLGDE-----VNSAKTLALARDISPKS 771 >gi|158523125|ref|YP_001530995.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] Length = 284 Score = 43.8 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 4/125 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A L +A +L G + A KAL I P Sbjct: 144 GDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKALSIFPRMAEALSG 203 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 A +++ A+ L++ + ++ R+ G+ + +A++++ Sbjct: 204 RGSVRAQAGDYTGALADLDKAIEFYPSYH----TAYYNRARVYQLTGNREKALANAVKAV 259 Query: 254 KLCDN 258 L N Sbjct: 260 GLFPN 264 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 34/259 (13%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 ++ QY+ A E +L + A + +GD A +AL I+PD P Sbjct: 2 ASVQAGQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFP 61 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + + +A+ L++ + A ++ A R + GD I + D Sbjct: 62 ESYNGRGKAFCDMGQMDKALADLDRAVELAPDF----ADAYNNRGVALRKTGDFIGALAD 117 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 ++++ + AA+ ++ W L + Sbjct: 118 HSRAIQMRPDR------AAEFYNARG----------VTW--------------LEKGDPD 147 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 + N + ++ +E G D+A A A+ I PR L Sbjct: 148 KAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKALSIFPRMAEALSGRGSV 207 Query: 369 QANSHNTDKILYWTQSALH 387 +A + + L A+ Sbjct: 208 RAQAGDYTGALADLDKAIE 226 >gi|299065268|emb|CBJ36436.1| conserved protein of unknown function, TPR repeat domain [Ralstonia solanacearum CMR15] Length = 433 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 83/228 (36%), Gaps = 17/228 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + A+ A KAL I PD ++ + +W L Q +A E N Sbjct: 177 ARETFHKAKMAARKALQIEPDLGEAYASLAHVRLHDWDWVD----LEQDFLHAIELNPGH 232 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ + G + +S ++ + + A L + +A L K Sbjct: 233 AVAYYWYAEYLMMAGRAEDAIARVRQSQQMDPLNSSLNSSVAMILYLARQYDQAREELRK 292 Query: 286 IWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 +++P H + +Y ++ + ++++A+ L S E+L +++ Sbjct: 293 ALEIDPNHFLLHSRLGLVYQQQKLFDDAIEEMQKAVTLSGR---STEALTGLAQT-YAAA 348 Query: 340 SIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYWTQSA 385 + A + + A++ + +A++ + + ++ W + A Sbjct: 349 DMRAAMQQIVDALQTESEQHYVHPYNMAKV-FGSLGDKEQTFGWLEKA 395 >gi|326318108|ref|YP_004235780.1| type 12 methyltransferase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374944|gb|ADX47213.1| Methyltransferase type 12 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 436 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 23/194 (11%) Query: 91 GLMSIAAHNIPLA---RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 GLM+ A NIP A + ++ L LL + + Q A E E + Sbjct: 52 GLMAEKAGNIPKAFDGLRRAVTLAPDWGPGQLELA-LLHAR----QNQLREAVELAEKLA 106 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + + + R GDL+ A R+ + L++ P + + + + + A Sbjct: 107 AREPRNLVVLAGVVDIAHRAGDLDMAVRHLRRGLEMVPGDVQLRRLLARDLSDQGQHAEA 166 Query: 208 ITF----LNQKKKNAKEWNRNRAILLIA----------RSLENADKGDMIASYHDAIESL 253 + +++ ++ + + A +L GD + +Y+ AI + Sbjct: 167 LQVWGALIDENPQDTEARLGRVKTCIAAGTPAQAVADTTALMELAPGDSVVAYYTAI-AH 225 Query: 254 KLCDNSIMASICAA 267 + + A Sbjct: 226 GVTPQHQPPELHRA 239 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 41/210 (19%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + +A LN+ ++ R + L G++ ++ ++ L Sbjct: 21 QIARGDLQQAALTLNKAQRTQPNDPRVFMLA----GLMAEKAGNIPKAFDGLRRAVTLAP 76 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------------HP--EIANIYTHL 302 + + A QN+ R+A + EK+ P H ++ HL Sbjct: 77 DWGPGQLELALLHARQNQLREAVELAEKLAAREPRNLVVLAGVVDIAHRAGDLDMAVRHL 136 Query: 303 LSE----------------NTVGKLKRALRLEEI------NKESVESLVIVSKIALEMGS 340 + + + A L+ N + E+ + K + G+ Sbjct: 137 RRGLEMVPGDVQLRRLLARDLSDQGQHAEALQVWGALIDENPQDTEARLGRVKTCIAAGT 196 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 QA A M++AP + I Sbjct: 197 PAQAVADTTALMELAPGDSVVAYYTAIAHG 226 >gi|296804290|ref|XP_002842997.1| anaphase-promoting complex protein [Arthroderma otae CBS 113480] gi|238845599|gb|EEQ35261.1| anaphase-promoting complex protein [Arthroderma otae CBS 113480] Length = 766 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 53/150 (35%), Gaps = 23/150 (15%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPA------------TREFAVYSLYFESCRIGDLNSA 173 Q+ +++ A + M +PA T + L + D +A Sbjct: 481 SAQVLSWSGRHDDAV---KQMNSLPADCLQLLKHQQIWTFFMGLLKLRRQ-LHRDDQRAA 536 Query: 174 QRYATKALDISPDAPWVTEAV----VQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAI 227 Q + +P P + + + + ++ A+ ++Q + + + ++ + Sbjct: 537 QHLLAQLEGAAPLDPEASTTLNLMKIDLLMREGDYETALASVDQLAQSIHQENFDIATQV 596 Query: 228 -LLIARSLENADKGDMIASYHDAIESLKLC 256 LL+A++ G + A+ + K+ Sbjct: 597 DLLVAKARIFDKTGQPERGFSLAMRAAKIA 626 >gi|228470675|ref|ZP_04055527.1| putative TPR domain protein [Porphyromonas uenonis 60-3] gi|228307607|gb|EEK16600.1| putative TPR domain protein [Porphyromonas uenonis 60-3] Length = 384 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 60/196 (30%), Gaps = 35/196 (17%) Query: 168 GDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 D + + KAL P W A + Y + + +A+ + + R Sbjct: 59 EDQTAFLEHVQKALQSEPNNGVAWAYVATI--YRMQGKTEQALEAATKAITFLQAKPARR 116 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A++ RS D D + + D ++K + + + A Sbjct: 117 AMVYSLRSDIYTDLEDGVKALMDLHSAIKDAPD-TP------NLYLKRGNLYAAMG---- 165 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 ++A + ++ ++ ++ + ++ IA++ + A Sbjct: 166 ------QYDLAEV--------------DMRKIASLDPKNPIGYIGLAVIAMQQERYEDAI 205 Query: 346 AKAMLAMKIAPRKEIF 361 +K+ P + Sbjct: 206 QNLNETIKLEPNEGFL 221 >gi|187251549|ref|YP_001876031.1| type II secretion system [rpteom [Elusimicrobium minutum Pei191] gi|186971709|gb|ACC98694.1| Putatively involved in type II secretion system [Elusimicrobium minutum Pei191] Length = 331 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 83/230 (36%), Gaps = 20/230 (8%) Query: 174 QRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 YA K A+ ++P+ + + Y+ ++ AI +LN+ + + L Sbjct: 85 LDYAEKDYLKAVKLNPNDAKILNNLGAFYIDRGQYYNAIIYLNEALRARPNYYN----AL 140 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + R + + G+ I +Y+D +++ + + +A A L++ + Sbjct: 141 VNRGIAFYNAGEGIKAYNDFHKAININKDGWLAYYNRGLFYYDIGDYLNAA--LDQTRVI 198 Query: 290 NPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 N P Y L+ L E+ + + ++++ + + A Sbjct: 199 NLKPSYGKAYLERGRALKLNNMYADALDDFKMAVELAPNNAVARYYLAEMFFKNHDLGGA 258 Query: 345 HAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 ++ +++ ++ PR + L+ I + + Y L DP Sbjct: 259 LSELLISKQLDPRFVPTYELMGDILALEDNVSAAANYIIAKKL----DPA 304 >gi|110833382|ref|YP_692241.1| TPR domain-containing protein [Alcanivorax borkumensis SK2] gi|110646493|emb|CAL15969.1| TPR domain protein [Alcanivorax borkumensis SK2] Length = 532 Score = 43.8 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 3/134 (2%) Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A L AR+L + + +LKL A + A+ L ++KA L+ Sbjct: 145 QAPLWYARALWLEHEEQPQPALEATERTLKLMPRHEDALLLKAQLLYETGDQKKALRHLK 204 Query: 285 KIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 K+ + P P IA + L S K+ + E N + ++ ++ +ALE G+ Sbjct: 205 KLVRKYPQAQRPRIAYVRMLLTSGELEDAEKQLAIMAEQNPQDLDLRFSLALLALEAGAS 264 Query: 342 DQAHAKAMLAMKIA 355 + A + Sbjct: 265 NAAQTHLKALLTYN 278 >gi|89900355|ref|YP_522826.1| hypothetical protein Rfer_1563 [Rhodoferax ferrireducens T118] gi|89345092|gb|ABD69295.1| putative transmembrane protein [Rhodoferax ferrireducens T118] Length = 385 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 87/285 (30%), Gaps = 44/285 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ-RYATKAL---DISPDAPW 189 +Y A E +L + + L + + +AL + +P Sbjct: 85 GEYERAVRVHEHLLSRGDLNLLD-RQRAQHALALDYLKAGLIDRSEEALLKLEGTPFEAQ 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A++ Y +++W RA + + N + A L ++ E+ + + Sbjct: 144 ARLALLANYERSRDWLRAAQIAQKLEHANQGSFQGRLAHYLCEQAAESLTAQEPEQANSL 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTHLLSEN 306 ++L ++ I A+ L Q + +A ++L++ + P P IA T Sbjct: 204 LQQALSTAPDAARPPIDLAQLLARQGQPEEAYLLLKRSLQSAPAATPLIAAPLTDY---- 259 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 A+ G +A + +P ++ + Sbjct: 260 ----------------------------AIACGRAPEALTLLKTSYAHSPSLDVLDAIVL 291 Query: 367 IEQANSHNTDKILYW----TQSALHAMPDPLWISDDGYLSSVWLP 407 +E + T W + + W++ + + P Sbjct: 292 LEAGHGGPTPTARDWYVQHLEREPSLVAAAKWLAGEKLEHEQFHP 336 >gi|327259895|ref|XP_003214771.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog [Anolis carolinensis] Length = 1244 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 102/305 (33%), Gaps = 41/305 (13%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 523 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 582 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + +L+ L + G+ A + +AL I+ D P + ++ Sbjct: 583 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 642 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHDA 249 +EW + K N ++L + R E +K + Sbjct: 643 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIY 701 Query: 250 IESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIY 299 + L+ N A ++ A K + + R+A + +W +A+IY Sbjct: 702 KQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIY 756 Query: 300 THLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ + + ++ E L+ +++ + G + + + A +AP Sbjct: 757 VEQKQYISAVQMYENCLRKFYKH--QNTEVLLYLARALFKCGKLQECKQTLLKARHVAPS 814 Query: 358 KEIFL 362 + + Sbjct: 815 DTVLM 819 >gi|325184412|emb|CCA18904.1| mitochondrial import receptor subunit TOM70 putative [Albugo laibachii Nc14] Length = 601 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 83/261 (31%), Gaps = 33/261 (12%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + + A E L+ F+ L DL A + KA I PD P Sbjct: 332 LKGDFETAKACFEAALKEKPDSLFSFIRLGGLCFDQKDLPGALEWFQKAFAIKPDCPTAY 391 Query: 192 ---------EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + ++Q A+ AI L A ++ + L Sbjct: 392 FHRGQLRSIDVSLEQSATAEGLREAIEDLTHCIGLASDF------AMAYMQLGVLHT--R 443 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLIS-----QNKKRKAEVI------LEKIWKVNP 291 + ++ LK+ I + A L + + EK +V+P Sbjct: 444 VGAFDLGTTYLKVAAELIPDAPEAYNYLGEIYMQMLGHPESSVTLEMVENMFEKAIEVDP 503 Query: 292 HPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +A +I N L + E++ S + V ++++ L M + D A Sbjct: 504 TYPMAYINKGSILAQKNPANAQDALGLFKKAIEMSPRSKLAYVNLAQVYLAMQAYDLAVE 563 Query: 347 KAMLAMKIAPRKEIFLLLAQI 367 + A+K+ + + LA + Sbjct: 564 QIDQAVKLVYTSQEYSELAAL 584 >gi|261194773|ref|XP_002623791.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis SLH14081] gi|239588329|gb|EEQ70972.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis SLH14081] gi|239613393|gb|EEQ90380.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis ER-3] gi|327351895|gb|EGE80752.1| pre-mRNA-splicing factor CLF1 [Ajellomyces dermatitidis ATCC 18188] Length = 679 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 24/239 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSAQR--YA------TKALDISPD 186 A + + ++P ++ A++ Y + GD + + A + + +P Sbjct: 260 ERARAIYKYALDRLPRSKSMALHKAYTTFEKQFGDRDGVEDVILAKRRVQYEEQIKENPK 319 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADKG 240 + V+ + + R + R L I +L E + Sbjct: 320 NYDIWFDFVRLEETSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEELETK 379 Query: 241 DMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 DM + E +KL + A+ I Q + A L P ++ Sbjct: 380 DMERARQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKLF 439 Query: 297 NIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y L E + K + E N + ++ + +++ + ID+A A L + Sbjct: 440 KGYIDLERQLFEFVRCR-KLFEKQIEWNPANCQAWIKFAELERGLDDIDRARAIYELGI 497 >gi|254447897|ref|ZP_05061362.1| hypothetical protein GP5015_186 [gamma proteobacterium HTCC5015] gi|198262677|gb|EDY86957.1| hypothetical protein GP5015_186 [gamma proteobacterium HTCC5015] Length = 585 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 97/277 (35%), Gaps = 24/277 (8%) Query: 127 VQIALAERQYNIAHEKLEMML---QIPATREFAVYSLYF-------------ESCRIGDL 170 A + +A + + L + T+ A L + R GD Sbjct: 87 AAAAEVMQDEEVAQQAAKAALYAKEYEKTQAAAERWLAINPNSSAAYRYAAVAALRQGDA 146 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +A Y + ++ A + V + T + ++ + + Sbjct: 147 EAATTYFDARIQLATSARAGLLETIALLVSE---DTSETSIAVARQLPELYPEEDK-AYF 202 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A++ A A+ E L+ + + A + A+ L S + +A +L +V+ Sbjct: 203 AKATVEARFEQSEAALDSINELLQRAPDDLSAVMLKAQILESLERGDEALTLLSDTLEVH 262 Query: 291 P-HPEIANIYTHLLSENTVGKLKRAL--RLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P H E+ Y LL + RA ++ + +V+ + + ++LE+ +D+A Sbjct: 263 PDHNELRLTYARLLIQEHRYFDARAEYQKMFQEQPHNVDLAMRLGFLSLELMELDEADNY 322 Query: 348 AMLAMKI-APRKEIFLLLAQIEQANSHNTDKILYWTQ 383 ++ +E L ++ + + + ++ + Sbjct: 323 FSHVLRSGRNSQEALYYLGRVAEQRGDYSAALRHYLR 359 >gi|169863459|ref|XP_001838351.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130] gi|116500644|gb|EAU83539.1| ADP/ATP carrier receptor [Coprinopsis cinerea okayama7#130] Length = 606 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 8/203 (3%) Query: 89 YTGLMSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 L+ IA+ N A + + + N+ +Y Q+ ++ A E Sbjct: 360 TQSLVKIASVHMEQGNPVKAFECFEEAIKHN--PNDPDIYYHRGQVLFIMSDFDKAAEDY 417 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 ++ F+ L + G++ ++ + + P + + + Sbjct: 418 TKSTELDDQFVFSHIQLAVAQYKAGNIANSMAQFRRTMKAFPQRSEPQNYYGELLLDQQR 477 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMA 262 + A+ ++ + K R + L+ + L K D+ A+ E+L + + A Sbjct: 478 YQDAVEKFDRAIEIEKAKPRPNVLPLVNKGLALYQWKQDIAAAEECCNEALTIDPDCDAA 537 Query: 263 SICAAKSLISQNKKRKAEVILEK 285 A+ + Q+K KA + +K Sbjct: 538 VATLAQLSLQQSKIEKAMEMFKK 560 >gi|37521471|ref|NP_924848.1| hypothetical protein glr1902 [Gloeobacter violaceus PCC 7421] gi|35212468|dbj|BAC89843.1| glr1902 [Gloeobacter violaceus PCC 7421] Length = 326 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 8/171 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKA 180 L E++Y+ A E+ +L+ + + + + D A KA Sbjct: 19 RLKLAGTLFREKRYDEALEEATAILEEEPSSLQALMLTGSVYLKTKRFDE--ALDAFQKA 76 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L + P +P + ++ K++ +A K + +A + + S + Sbjct: 77 LRVDPLSPQACLGIGMAHLRKKDYKQATVAFESALK--LDPKSAKAYITLGMSALGQE-- 132 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++L+ + MA I +++ K A LE K+NP Sbjct: 133 HYDLAIQYFNKALRFDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNP 183 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 2/180 (1%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 + ++ L L ++ Y A E L++ A +L + Sbjct: 70 LDAFQKALRVDPLSPQACLGIGMAHLRKKDYKQATVAFESALKLDPKSAKAYITLGMSAL 129 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + A +Y KAL P A + + Y + A++ L K + Sbjct: 130 GQEHYDLAIQYFNKALRFDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNPKSGMAN 189 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L L+N D A+ +E+ + A + ++ +A IL Sbjct: 190 MSLASFY-LQNKDYTSAEAALQRVLEARGDKPA-PTIMLSLADLYVQTDRTEEAGDILRA 247 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 61/194 (31%), Gaps = 6/194 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G+ + + A ++ S Y+ AL + Y++A + L Sbjct: 88 LGIGMAHLRKKDYKQA--TVAFESALKLDPKSAKAYITLGMSALGQEHYDLAIQYFNKAL 145 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + E A + ++G A A+ ++P + ++ Y+ K+++ A Sbjct: 146 RFDPQAEMARILISRAYKKLGKPGDAVSTLETAVKLNPKSGMANMSLASFYLQNKDYTSA 205 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-ICA 266 L + + + A ++ + + D D + +L Sbjct: 206 EAALQRVLEARGD---KPAPTIMLSLADLYVQTDRTEEAGDILRALPSAPKLQARKHKLF 262 Query: 267 AKSLISQNKKRKAE 280 Q ++A Sbjct: 263 GDLYTKQGLLKEAA 276 >gi|116619165|ref|YP_821321.1| tetratricopeptide domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222327|gb|ABJ81036.1| Tetratricopeptide domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 632 Score = 43.8 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 65/189 (34%), Gaps = 14/189 (7%) Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 A A +PD A + A+++ AI+ N + + Sbjct: 7 LAVAAVACAQTPDPAERGYAAL----RARDYDAAISAF---LGAPDRANVRKDLAYTY-- 57 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 G+ + E+++L + A++ A ++ +A I E++ K Sbjct: 58 ---LKIGESELARDQFHEAMRLVPGDVTAALEYAFLCYETRQQAEARRIFERLRKSGN-- 112 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 IA H + + + R + E+ ++ ++ +A + + A + A + Sbjct: 113 AIAEQAFHNIDDPLAEGIARWRKAIELGADNFSVHFELAVLAEQRDDLVLAAEQYERAWR 172 Query: 354 IAPRKEIFL 362 + P + L Sbjct: 173 LIPARRTVL 181 >gi|239906747|ref|YP_002953488.1| hypothetical protein DMR_21110 [Desulfovibrio magneticus RS-1] gi|239796613|dbj|BAH75602.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 570 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 57/173 (32%), Gaps = 11/173 (6%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ + L + + A + + + S+ A QN++ KA LE+ Sbjct: 58 FLVYQDLLRQGRKEDAAQTLAGLAAAHPSPDL---SVELANLYWGQNEREKATETLEQAR 114 Query: 288 KVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 P +AN Y + +K + ++ ++ + ++ G Sbjct: 115 TAFPGSRQVNFYLANAYQMRRLNDQA--IKVLESFLASQPKDYAAVQELASLEIDAGRNK 172 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS-ALHAMPDPLW 394 +A + + L+A+ + D + ++ + A A P W Sbjct: 173 EAGELLGRIPEGERDATVLYLMAKAAAGSGRAKDAMRHYRAAVAADAGLMPAW 225 >gi|225681558|gb|EEH19842.1| DnaJ and TPR domain-containing protein [Paracoccidioides brasiliensis Pb03] Length = 675 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVL- 200 Q P + G+ A + AL + PD+ + +++ Sbjct: 429 QDPDALF--LRG--RLFYAQGENEQAINHFKLALSLDPDSSQAIKYLRMVQKLLRMKDEG 484 Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++++ +AI ++ + + + LL R+ + S D ++L+L Sbjct: 485 NAAYKSRKYQQAIDIYSKALEVDPKNKNINSKLLQNRAQSYLNLNKYEKSIEDCTKALEL 544 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A AK+ +A L+KI + NP Sbjct: 545 DPSYVKAQRVRAKAYGGAGNWEEAIQDLKKISEANP 580 >gi|329923007|ref|ZP_08278523.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5] gi|328941780|gb|EGG38065.1| tetratricopeptide repeat protein [Paenibacillus sp. HGF5] Length = 1112 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 84/314 (26%), Gaps = 44/314 (14%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIA-------- 139 +++ A + + L + Q+ Sbjct: 425 VAVFAADGKELVAYQPKPRTLERTPDPATAIGKPEELKNTEALFLAGQHLEQYRHATYEP 484 Query: 140 HEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALD------ISPDAPWVT 191 L+ R Y L R G ++ Y KA++ P Sbjct: 485 EAYYVEGLRRDAGDARLNNAYGLLL--LRRGCFTQSEVYFRKAIETLTRHNARPYDSEP- 541 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A +W + + + +A + +K + ++ Sbjct: 542 ---FYHLGKALKWQGRLDEAYAYLYKSVWSGAWQGAGYLAIAQIACEKQEYEEAFELIER 598 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSEN 306 SL + A + L + AE LE+ K++P E+A +Y + Sbjct: 599 SLAAQYRNYKARHLKSVVLRKLGRLADAESWLEETLKLDPMDAGAMNELAAVYQERNQGD 658 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-------- 358 + L ++ +++ + + +++ + G A + A Sbjct: 659 KSRHV--YESLAQLLRDNPHNYIAIAQDYADAGQYGDALNVLQRLERRAASAVYPMVYYY 716 Query: 359 --EIFLLLAQIEQA 370 + + + E+A Sbjct: 717 QGSALMKMNRAEEA 730 >gi|261408559|ref|YP_003244800.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family [Paenibacillus sp. Y412MC10] gi|261285022|gb|ACX66993.1| ATP-dependent transcriptional regulator, MalT-like, LuxR family [Paenibacillus sp. Y412MC10] Length = 902 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 83/289 (28%), Gaps = 83/289 (28%) Query: 129 IALAERQYNIAHEKLEMMLQIPA---------TREFAVYSLYFESCRIGDLNSAQRYATK 179 + A + + I + L E L +A + Sbjct: 521 AYQLQGDRAAAGQAYHEAVAISQKIGHFMIAMMATLGL-GLLQE--TDNQLYAAAVTYRR 577 Query: 180 ALDIS--PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 L+++ P P EA + + EW+ L+ +++ L + Sbjct: 578 VLELAGDPPPPAACEAHLGLARICSEWND----LDAAERHG---------LKALQLAAQF 624 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D+ D + + A+ +S+ + R+A +L K Sbjct: 625 DQTDRAVACE----------------VFLARLKLSRGEVREAAAMLAKA----------- 657 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +L R + E+ V+V L+ G+ +A A + Sbjct: 658 -----------DRLGRQQQFMSQLPFIAEAQVLVL---LQQGNFGEASQLAQEHGLPLSQ 703 Query: 358 KEIFL--------------LLAQIEQANSHNTD-KILYWTQSALHAMPD 391 + L LLAQ+E + K++ ALHA D Sbjct: 704 ARVLLAKGQAGAALAIMEPLLAQMEAKEWADEQLKVMVVLALALHAQGD 752 >gi|153809534|ref|ZP_01962202.1| hypothetical protein BACCAC_03852 [Bacteroides caccae ATCC 43185] gi|149127842|gb|EDM19065.1| hypothetical protein BACCAC_03852 [Bacteroides caccae ATCC 43185] Length = 272 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 59/169 (34%), Gaps = 9/169 (5%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q K + N A+L L G+ + +L ++ + Sbjct: 40 AEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEYDKALESYSFALNFAPLAVPILLDR 98 Query: 267 AKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRALRLEEIN 321 A + + +A +L++ K N + Y ++ + ++ RL E++ Sbjct: 99 AAIYMETGRTDRAYTDYCRVLDED-KQNKEALLMRAYIYILRRDYPAARID-YNRLLELD 156 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 +S + ++ + + ++ + P +++ A +E+ Sbjct: 157 PQSYSGRLGLATLEQKEEKFRESLDILNKMIVETPEDATLYVARADVER 205 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 8/197 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQI 149 GL+ A + +S+ + L I + + + A+ ++ + Sbjct: 65 GLVQRRLGEYDKALESYSFALNFAPLAVP--ILLDRAAIYMETGRTDRAYTDYCRVLDED 122 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 +E + Y R D +A+ + L++ P + + +++ ++ Sbjct: 123 KQNKEALLMRAYIYILRR-DYPAARIDYNRLLELDPQSYSGRLGLATLEQKEEKFRESLD 181 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 LN+ E A L +AR+ + + D E+++L + A + Sbjct: 182 ILNKMIVETPE----DATLYVARADVEREMKHEDLALVDLEEAIRLNASLADAYLLRGNI 237 Query: 270 LISQNKKRKAEVILEKI 286 + Q KK A+ EK Sbjct: 238 YLMQKKKALAKADFEKA 254 >gi|91775277|ref|YP_545033.1| hypothetical protein Mfla_0924 [Methylobacillus flagellatus KT] gi|91775421|ref|YP_545177.1| hypothetical protein Mfla_1068 [Methylobacillus flagellatus KT] gi|91709264|gb|ABE49192.1| Tetratricopeptide region [Methylobacillus flagellatus KT] gi|91709408|gb|ABE49336.1| Tetratricopeptide region [Methylobacillus flagellatus KT] Length = 387 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 91/271 (33%), Gaps = 16/271 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNA 218 L + + G + A+ T D A+++ Y+ +EW AI + ++ + Sbjct: 114 LAQDYLKAGLFDRAEELFTSLHDSRYKQT-ALRALLEIYIREREWHHAIKSAVELERLSG 172 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + A +++ + D+ ++ H +++ + A+I ++ Sbjct: 173 ISFRKEVAQFHCEIAMKAILEHDVHSARHALDTAIEADKGCVRANIMLGDLEAGAGNHKQ 232 Query: 279 AEVILEKIWKVNP------HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIV 331 A +++ P P++ N Y L + + + LK L+ ++ L +V Sbjct: 233 AISFWKRVEFQRPEYLGLVAPKLLNSYKALGNLDEGITLLKGYLQTYKL----PSILNLV 288 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQ-IEQANSHNTDKILYWTQSALHA 388 + L A A ++ P + L AQ + + + ++ T Sbjct: 289 YETTLSEEGAASAEKLAREELRRKPSLQALDQFLRAQSLLEGANQQDALLMQQTVRYAIG 348 Query: 389 MPDPLWISDDGYLSSVWLPLSPISKTLCYFE 419 + G+ + + P Sbjct: 349 NRSAHYCDQCGFRARNFHWQCPACNAWESLS 379 >gi|78050040|ref|YP_366215.1| polysaccharide deacetylase precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038470|emb|CAJ26215.1| Polysaccharide deacetylase precursor [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 900 Score = 43.8 bits (102), Expect = 0.067, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 AK +R RA L R L+ + + E+LKL + +A+ Q + Sbjct: 777 AAKSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQGRF 836 Query: 277 RKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLE 318 ++ LE K++P + + Y + + A LE Sbjct: 837 AESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKARKAYATYLE 882 >gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 260 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 15/204 (7%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 GD A T+AL +SP+ Y + + AI NQ + + Sbjct: 49 KAEKGDYQGAIADLTQALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPD--- 105 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 R + ++ GD + D ++++L + A + + + A Sbjct: 106 -DVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADY 164 Query: 284 EKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + K+N P+ A Y + G + + + N ++ L + Sbjct: 165 NQAIKLN--PDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNL 222 Query: 339 GSIDQA----HAKAMLAMKIAPRK 358 G +A A L + + Sbjct: 223 GDQPKALEDFRQAATLFQQQGNTE 246 >gi|118358198|ref|XP_001012348.1| TPR Domain containing protein [Tetrahymena thermophila] gi|89294114|gb|EAR92102.1| TPR Domain containing protein [Tetrahymena thermophila SB210] Length = 1244 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 97/313 (30%), Gaps = 57/313 (18%) Query: 98 HNIPLARKMH-SYVSQQHTFHNEYLVYLLEVQIA-------LAERQYNIAHEKLEMMLQI 149 + A++ V + N+ L Q + E L+I Sbjct: 749 GDNKTAQQYDFKAVKMREALQNDEPSKL--AQSYCRIAVSYERLGDDKTSLEYKLKALKI 806 Query: 150 PATREFA--------VYSLYFESCRIGDLNSAQRYATKALDIS--------PDAPWVTEA 193 T + S+ R+G+ AQ Y +AL + PD + Sbjct: 807 RETLFQGNHHDLAFSLNSVAISYERLGNYKEAQDYFLRALKMREALYHGKHPDLAESYNS 866 Query: 194 VVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNR---AILLIARSLENADKGDMIASYHDA 249 + Y ++S+A+ L + +N A L ++ G + Sbjct: 867 IAAFYSRQGDYSKALDYELKSLYIREILYLKNHPDIAESLNNVAVAYEKLGFDEVAQEYD 926 Query: 250 IESLKLC--------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP------HPEI 295 ++++K+ + Q +KA +K K+ HP++ Sbjct: 927 LQAMKMREALYNQDHPELAQSYSNMGVCYERQRNYQKALEYEKKALKMRSRLYEGDHPDV 986 Query: 296 AN-------IYTHLLSENTVGKLK------RALRLEEINKESVESLVIVSKIALEMGSID 342 A Y + S+ +LK R ++ + + ESL V+ +G Sbjct: 987 AESYNNLGICYERIGSDKKALELKIKSLQMRERIYKQEHADVAESLNSVAISYGRIGENQ 1046 Query: 343 QAHAKAMLAMKIA 355 +A + A++I Sbjct: 1047 KALEHKLKALEIR 1059 >gi|67921469|ref|ZP_00514987.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67856581|gb|EAM51822.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 248 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 47/160 (29%), Gaps = 7/160 (4%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + A+ NQ R ++ G + D +LKL Sbjct: 68 KSRRGNYQGALKDFNQVIAENP----QDIHAYFNRGYAHSSLGQFEQALADFTIALKLDP 123 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRA 314 + A + + + KA EK ++NP+ A HL S + Sbjct: 124 QMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLAHLNSGSPGLAKIDF 183 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 I+ E+ L++G + A A A I Sbjct: 184 TEAVMIDPLYGEAYYNRGLALLDLGERENAIADFQKAADI 223 >gi|71902140|ref|ZP_00684168.1| HemY, N-terminal [Xylella fastidiosa Ann-1] gi|71728101|gb|EAO30302.1| HemY, N-terminal [Xylella fastidiosa Ann-1] Length = 389 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 124/367 (33%), Gaps = 19/367 (5%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56 + L +FF++ L I S + P DV I G Y T+ +L + Sbjct: 4 LRNLALWFFLLILGIFSAQWLLQQPNRDLGDVVIRIGGNDYITTVPQATILLLIIVLLLW 63 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L ++ + + + Y +G+ L GL ++ LA ++ S+ Sbjct: 64 SLRSLLVLPI-------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDTEV 116 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 L +++A ++ A+ + + T + S + + + Sbjct: 117 SAIALTT--AIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLD 174 Query: 177 ATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A + + P ++Q + +S T Q+ + E+ R + + Sbjct: 175 ALETHRLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFEKETIENVIRQ 234 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHPE 294 D + + ++LK N + A L +N + E LE+ W N Sbjct: 235 AKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN---- 290 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y L + + RA ++ S L+ + ++AL+ QA A+ Sbjct: 291 LIRLYGFLPLKEYQTRQNRAEHWLTLHPNSPNLLLTLGRLALQQQQYSQAETFLRRAIDK 350 Query: 355 APRKEIF 361 E + Sbjct: 351 ETNAETW 357 >gi|260463120|ref|ZP_05811323.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] gi|259031241|gb|EEW32514.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] Length = 159 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 6/135 (4%) Query: 84 GYKALYTGLMSIAAHNI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 G ALY L +IA + P+A M +Y + L VQ +A + Y A Sbjct: 7 GRHALYGLLGAIAVLTVVPVATIMPAYAVDDIEGTDAP--DLTAVQAKIAAKDYKGALAD 64 Query: 143 LEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 L + Q ++ VY+L + R GD +A Y KAL++ PD E + + YV Sbjct: 65 LRDLAQDN--QQADVYNLLGFTLRKTGDFTTALTYYNKALELKPDHKAAREYLGELYVET 122 Query: 202 KEWSRAITFLNQKKK 216 + ++A L +K Sbjct: 123 GDMAKAQEQLASLQK 137 >gi|254483181|ref|ZP_05096414.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] gi|214036552|gb|EEB77226.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 610 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + AR + + + + +A + Y A E + + A Sbjct: 193 ELEQARICFERAAA--IAPDVAEIDVSLGNVAFELKDYQTAENCFENAIHKESGYVLAHE 250 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 +L ++G +S AL P + ++++ + ++ + A +++ Sbjct: 251 TLSELKWQLGKTDSYLSSYEIALKERPQDMALRHSLLRLLINSQRYDEARDLVDRTMHTT 310 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + RA + A+ GD + + + SLKL + Sbjct: 311 QTPELLRATGELY-----ANDGDYVQARQNFEASLKLAPS 345 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 12/219 (5%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIA 139 Y+AL L + N LA K +H L + ++ A Sbjct: 6 RVRYQALLQQLSKLVQSNPKLALKKIQ----EHLRQRPADANFLHLKGLAKADMGLHDAA 61 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 E + L+ + +L IG A+++ A+ ++P+ + + Sbjct: 62 IEAMRASLKAHRQQPEVHNNLANSYKAIGQTERAEQHYRDAITLNPNYLDAFKNLGLLLQ 121 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + S AITFL + + + +A +L A ++ + +L++ + Sbjct: 122 STGDLSNAITFLQRAV----DLSTQKAPMLTALGNVYREQELFQQAVPCYQAALQINPSY 177 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + A + +A + E+ + P++A I Sbjct: 178 VNAIHNLGLCYKLTEELEQARICFERAAAIA--PDVAEI 214 >gi|157812776|gb|ABV81133.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Tanystylum orbiculare] Length = 288 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 6/173 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + + H + L L I + A + L++ A Sbjct: 34 GLVQEAEECYGTALRLCPSHADSLNNL--ANIKREQGFTEEATRLYQKALEVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 92 SNLASVLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL A A L Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDAYCNLAHCL 200 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVQEAEECYGTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + ++L++ A A L Q K A + ++ ++ P A+ Sbjct: 66 EQGFTEEATRLYQKALEVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 >gi|152972399|ref|YP_001337545.1| putative cellulose synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957248|gb|ABR79278.1| putative cellulose synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 1342 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 25/275 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188 A ++ E +LQ A+ + + + R GD +A +Y ++A D+ DA Sbjct: 275 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 334 Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +A+ + + + ++Q + + + L AD Sbjct: 335 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGAQGASAKLFRADVLRHNKDLP 394 Query: 248 DAIESLKLCDNSIMASICAAK-----SLISQNKKRKAEVILEKI-----WKVNPH----- 292 A ++L+ N + AA+ L QNK +A+ +L+ + K+ P Sbjct: 395 QAEQTLRSLLNDDPQNA-AARENLYYVLREQNKSAEAQAMLQTLPQSLRQKLQPRVVAGM 453 Query: 293 PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 P A + S N G + + + ++++ + G+ +A + Sbjct: 454 PGDALRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSLMS 513 Query: 350 LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 A + A + + + + Sbjct: 514 AAYRPGASNSALYA-AALFASENGAWQQAQTLLAR 547 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 101/367 (27%), Gaps = 79/367 (21%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 + + +R +A G ++ + N A++ V Q + + L + IA Sbjct: 253 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 307 Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176 Y A + L + Y ++ + G+++ A Sbjct: 308 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 367 Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 A A L + D P + + + + A L + + Sbjct: 368 LAQQSGAQGASAKLFRADVLRHNKDLPQAEQTLRSLLNDDPQNAAARENLYYVLREQNKS 427 Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258 +A+L ++ G+ + E + + Sbjct: 428 AEAQAMLQTLPQSLRQKLQPRVVAGMPGDALRRQAQAQVSSGNPAGAIATLREGVARYPD 487 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 + A+ L +A ++ ++ P + +Y L + G ++A L Sbjct: 488 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNSALYAAALFASENGAWQQAQTLL 545 Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359 ++ ++ ++ L G+ A P+ + Sbjct: 546 ARIPGGSQTSDMRDLRQRVNYNLQLVTAENYLAQGNTIAASNTLRAMASTPPKAPADAGK 605 Query: 360 IFLLLAQ 366 + LLA+ Sbjct: 606 LARLLAE 612 >gi|145499952|ref|XP_001435960.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403097|emb|CAK68563.1| unnamed protein product [Paramecium tetraurelia] Length = 680 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 83/225 (36%), Gaps = 23/225 (10%) Query: 134 RQYNIAHEKLEMMLQIPAT--REFAVYSLYF-ESCRIGDLNSAQRYATKALDISPDAPWV 190 + Y +A + +++ T + L E + D A + +AL+++ + P + Sbjct: 394 KNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELND---AIKDFEQALELNSNNPGI 450 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + Q Y L K + +A+ +L++ K + L+ RS DK + + D Sbjct: 451 YSGLGQAYRLKKNYEKALFYLDKALKESPHNQE----FLVQRSNIFIDKKEYPKAIIDLT 506 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--------HPEIANIYTHL 302 +L N + + +K+ L K ++ P H + + +L Sbjct: 507 SALDRKPNDAQIYYRRGLAYYKNQEFKKSIADLYKAFENKPFQSYVPDIHYHLGISFANL 566 Query: 303 LS-ENTVGKLKRALRLEEINKESVESL----VIVSKIALEMGSID 342 + + L A+ L++ + ++V + L + D Sbjct: 567 EMFDKAIEPLTNAIDLQKYEPAYIHERAKCFLLVGENQLALEDFD 611 >gi|146306092|ref|YP_001186557.1| TPR repeat-containing protein [Pseudomonas mendocina ymp] gi|145574293|gb|ABP83825.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas mendocina ymp] Length = 575 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 58/264 (21%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q A A +A + +G +A A + +P Sbjct: 77 QQAQATGDAGVAERAFR------------------IAEYLGAEQAALDTALIWAENAPSN 118 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLEN 236 A Q A + ++ F+ K + + + L A + + Sbjct: 119 IDAQRAAAVQLARAGRYDESMVFMESVLKRQGDTHFDFLALSAAETDPDTRAGLLQGFDR 178 Query: 237 ADKGDMIASYHDAIESLKLCDN-----------SIMAS-------ICAAKSLISQNKKRK 278 S +++ L + + AS + A+ L S + + Sbjct: 179 LLAKHPDNSQLLFGKAILLQQDGRAEEALELLEAQPASQTEVSPLLLRARLLQSLKRGDE 238 Query: 279 AEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRAL----RLEEINKESVESLVIV 331 A +L+K + HP+ + Y LL E +L A +L + N + + Sbjct: 239 ALPLLQKG--IRKHPDDKRLRLTYARLLVE--QDRLDEAKGEFSKLVQENPNDDDLRFSL 294 Query: 332 SKIALEMGSIDQAHAKAMLAMKIA 355 + + LE + ++A ++ Sbjct: 295 ALVCLEAEAWEEAIVYLEELIERR 318 >gi|86138068|ref|ZP_01056643.1| hypothetical protein MED193_01035 [Roseobacter sp. MED193] gi|85825095|gb|EAQ45295.1| hypothetical protein MED193_01035 [Roseobacter sp. MED193] Length = 267 Score = 43.8 bits (102), Expect = 0.068, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 15/135 (11%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI------TFLNQKKK 216 E R GD A + + P + + Q + +W RA+ L+ Sbjct: 5 EHLRAGDPEQALAALQEQVRADPSNAKLRIFLFQLLCILGDWKRAVAQLRLSAELDAGAT 64 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + R + + R + D + + +A + A+ +++Q Sbjct: 65 VMAQAYREAILCEVYREKVFKGEKDPLILGE---------PEAWLAQLIEAQKMLAQGNT 115 Query: 277 RKAEVILEKIWKVNP 291 +A + E ++ P Sbjct: 116 DQATALREAAYEAAP 130 >gi|225430656|ref|XP_002270163.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296085167|emb|CBI28662.3| unnamed protein product [Vitis vinifera] Length = 986 Score = 43.8 bits (102), Expect = 0.069, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 12/143 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G LN A + +AL I+P +V + + +A + + E R Sbjct: 175 MRKGRLNEAAQCCRQALAINP-------LLVDAHSNLGNFMKAQGLIQEAYSCYIEALRI 227 Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + AI + + GD+ + E++KL A + + ++A V Sbjct: 228 QPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIV 287 Query: 282 ILEKIWKVNPHPEIANIYTHLLS 304 ++ + PE A Y ++ Sbjct: 288 CYQRALQTR--PEYAMAYGNMAG 308 >gi|313159809|gb|EFR59165.1| tetratricopeptide repeat protein [Alistipes sp. HGB5] Length = 444 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 13/150 (8%) Query: 126 EVQIALAERQYNIA-----HEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYA 177 + Q A A + L+ +L + GD A Sbjct: 211 KAQFDAAFGLSGAASCENLEKLFRGKLEAAPDDEALLAQAVALMSRAKCDGDFY--FTLA 268 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 K + P + Q + ++++AI +LN+ ++ R +LL+ +L + Sbjct: 269 EKYYAVKPS-SETAMFLAQAFQSKGDYAKAIKYLNEALAVEQDPA-ERQLLLVRIALIDL 326 Query: 238 DKGDMIASYHDAIESLKLCD-NSIMASICA 266 D+ + A ++ L + + + A Sbjct: 327 VANDIPGAASAARQARDLNPEDGVPYYVLA 356 >gi|163746798|ref|ZP_02154155.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex HEL-45] gi|161379912|gb|EDQ04324.1| adenylyl cyclase class-3/4/guanylyl cyclase [Oceanibulbus indolifex HEL-45] Length = 565 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 88/244 (36%), Gaps = 33/244 (13%) Query: 139 AHEKLEMMLQIPATREF-----AVYSLYFESCR------IGDLNSAQRYATKALDI--SP 185 A + + TR Y + + R D+ +A+ AL+ S Sbjct: 300 ATAAQIEVTEQERTRLLPPANLLAYGIVLKGERYLSRYTQKDVQNARSLFEAALESDSSY 359 Query: 186 DAPWVTEAVVQQYVLAKEWSRAIT-FLNQKK---KNAKEWNRNRAILLIARSLENADKGD 241 + + + +WS L++ + A E + + A + + + Sbjct: 360 SRAYAASSRTSNLIWRYDWSEDTANSLDEALVFAQRAIEMDGSDARGFGELGFAHLYRKE 419 Query: 242 MIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNP-HPE---- 294 A+ + +LKL N A++ A +L + ++ +L+K ++NP +P+ Sbjct: 420 HEAALNAYDRALKLNPN--DANVMSDMADALAHSGRSEESIDLLQKAMRLNPFYPDQYVW 477 Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + Y +L + +K +++ E I++ +G D+A ++A + Sbjct: 478 HLGGAYFNLKRYD--DAIKTIQKMQ----NPTEGRRILAASYAYLGRKDEAQSEADRVRR 531 Query: 354 IAPR 357 P Sbjct: 532 AHPD 535 >gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 666 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 11/117 (9%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A +AL I+PD + + K +S A+ + + + +A L + Sbjct: 310 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSA-WQAWLGRGK 368 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEK 285 +L+ DK A+ES + + A+ A A + + A+ LEK Sbjct: 369 ALDKLDKNQE------ALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEK 419 >gi|86159740|ref|YP_466525.1| hypothetical protein Adeh_3321 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776251|gb|ABC83088.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 453 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 10/261 (3%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + + K +L E ++L G ++ A+ KAL P + Sbjct: 71 DWAVLERKWRAVLDAGEVAEA-RHNLGVALEAQGRVDEARAEYQKALAAKPGLRQAAVNL 129 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + A + ++ E R R L + + G + ++ A E+L Sbjct: 130 GVLLEKQGDLAGAQSIYAAVVRDFPEDARARERL----AAMYRNAGQLDEAWRLAREALL 185 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGK 310 S+ A + A+ + + A++IL + K+ P P +A E Sbjct: 186 RDPRSVGAYVVMARVSLQRGNLDVAQLILLRAQKLAPSDPELPFLAGEVLAKQGEPEAAA 245 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 + L ++ + + + A++ A ++ + L + + Sbjct: 246 AQWRKALA-LDDGYLPARRALLDAAVKGRRWPVVAEHAQAMVRADAKNAPAWLALGVAKR 304 Query: 371 NSHNTDKILYWTQSALHAMPD 391 + D+ L A A D Sbjct: 305 HLDKPDEALAAYAKAQEASGD 325 >gi|294667769|ref|ZP_06732979.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602395|gb|EFF45836.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 837 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L + G +A + KA+DI P V+ + ++ +A L ++ Sbjct: 418 YALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKKATETLRVAEQF 477 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A+ + + ++ D + I+ +L + A AA L N+ Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADSWIQMAELYPDYAPAQANAAMDLFVANRFA 534 Query: 278 KA 279 A Sbjct: 535 DA 536 >gi|226311501|ref|YP_002771395.1| hypothetical protein BBR47_19140 [Brevibacillus brevis NBRC 100599] gi|226094449|dbj|BAH42891.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 674 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 4/128 (3%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D +AQ Y KA + P + + ++ +RA +Q + + + Sbjct: 276 ALMENDWETAQSYLAKAHALYALDPDLIRLQGEYFLRTGNKNRAFHTFDQLIR--LDPDN 333 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L R+ +KGD + D E L A K + + KA+ + Sbjct: 334 IDAYL--YRARLFLEKGDATDAIKDCEEILTRMPELWDARSLLGKGYLQLGEWEKAQKVF 391 Query: 284 EKIWKVNP 291 ++I NP Sbjct: 392 QEILSHNP 399 >gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469] gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469] gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469] gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469] Length = 1297 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 22/272 (8%) Query: 117 HNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 NE LL A E ++ ++ + A + + A Sbjct: 56 ENESFSALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAA 115 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KAL I + V E + Y L + A+ + K + + L R Sbjct: 116 YIIEKALQIDRRSKEVWETKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPK 175 Query: 235 ENA---DKGDMIASYHDAIESLKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILE 284 + KG + E +K+ + + + + + ++ R+A L+ Sbjct: 176 DLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALK 235 Query: 285 KIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K K++P+ + +Y LK +I+ +S + + L + Sbjct: 236 KAIKIDPNDKKSWINLGILYK--KRGEYEEALKCFKEAIKIDPNDKKSWYLEA-SVLHIL 292 Query: 340 SID-QAHAKAMLAMKIA-PRKEIFLLLAQIEQ 369 D +A A+++ + LL + + Sbjct: 293 ERDSEALKSINRALELDKKYESALLLRRDVAK 324 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 22/172 (12%) Query: 127 VQIALAERQYNIAHEKLEMMLQ-IPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDI 183 + A + +E ++ + +Y ++GDLNSA YA KA ++ Sbjct: 860 AKAYYKVGDLQEAIKSIERAIEWKKDAKFYLLGSR-IY---LKMGDLNSAYNYANKAFEL 915 Query: 184 SPDAPWVTEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK- 239 +A + ++ I L K + N A+ L+ ++LE ++ Sbjct: 916 ----EDSDDARINLASIMFELGKYDDVIALL----KPLGKNNNLDALRLLGKALEAEERY 967 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D + Y+ ++ K +S I + ++ NK +A E+ ++P Sbjct: 968 EDAVKIYNKVVDIDKKDKSSW---ISLGRCYLTLNKYNEAIKAFERASLIDP 1016 >gi|196232459|ref|ZP_03131312.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196223531|gb|EDY18048.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 672 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 80/244 (32%), Gaps = 14/244 (5%) Query: 121 LVYLLEVQIALA---ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 + L +QIAL + A +L + A++ L + ++G A Sbjct: 1 MTTLQAMQIALQHHQSGRLADAEAIYRQILAVEPRHADALHLLGVIAHQVGQHEGAIELI 60 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ ++P+ + + Y ++ AI + + L Sbjct: 61 GEAVQLNPNDAAALCNLGEAYRVSGRLEEAIVAYRRALCIQPGQPEACSNL----GNVLR 116 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G M + + +L + A + A +L + +A +++PH A Sbjct: 117 SVGRMDEAIDACRRATQLRPGYVEAHLNLANALSEHGRSEEALAEYRCALEIDPH--HAE 174 Query: 298 IY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + + V + + + + + + E G D+A A A+ Sbjct: 175 AWNSYGSALVGMQRLVEAEAAFRQAIQWQPQHAGAWSNLGGVLAECGRHDEAVAAYRRAL 234 Query: 353 KIAP 356 +I P Sbjct: 235 EINP 238 >gi|156553220|ref|XP_001599238.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 809 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 54/182 (29%), Gaps = 17/182 (9%) Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +L Q + + A E E + P + Y+L + A + Sbjct: 480 LGSVLSAQ-----GRVDEAEEAFIEALRYRPNMADV-HYNLGILQQGRRNYEEAILSYQR 533 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-------KKKNAKEWNRNRAILLIAR 232 A+ P + V + A+ L K+ K R L+ Sbjct: 534 AIHFRPSLAQAYVNLGATLVSVGRGTEAVAVLRAGASLDGSALKDKKAHEAARVQALLQL 593 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI---CAAKSLISQNKKRKAEVILEKIWKV 289 A++G + + E+L++ + ++L + +AE + Sbjct: 594 GSLYAEQGRLHKALSSYREALRMLPDHYPPQSVYNLLGETLSRLQQYNEAEKWFQASLAS 653 Query: 290 NP 291 P Sbjct: 654 QP 655 >gi|118091214|ref|XP_420968.2| PREDICTED: similar to KIAA0155 [Gallus gallus] Length = 1265 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 102/305 (33%), Gaps = 41/305 (13%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 556 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 615 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + +L+ L + G+ A + +AL I+ D P + ++ Sbjct: 616 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 675 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHDA 249 +EW + K N ++L + R E +K + Sbjct: 676 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIY 734 Query: 250 IESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIY 299 + L+ N A ++ A K + + R+A + +W +A+IY Sbjct: 735 KQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIY 789 Query: 300 THLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ + + ++ E L+ +++ + G + + + A +AP Sbjct: 790 VEQKQYISAVQMYENCLRKFYKH--QNTEVLLYLARALFKCGKLQECKQTLLKARHVAPS 847 Query: 358 KEIFL 362 + + Sbjct: 848 DTVLM 852 >gi|88602877|ref|YP_503055.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88188339|gb|ABD41336.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 252 Score = 43.8 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 38/115 (33%), Gaps = 4/115 (3%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFES 164 ++ + + + ++ + + Y+ A +++ T + L Sbjct: 87 DAFTAAIRIQPDYPEAWFMKGRASYMMGDYDEAVRSFYKAIELDETNTEYWYHRGLAL-- 144 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 G + A + K L ++P + YV+ K ++ A+ + K Sbjct: 145 SGRGQYDLAISHFDKILQMNPSLEKAWSSRGYAYVMEKNYNDALDSFEEALKINP 199 >gi|326498109|dbj|BAJ94917.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 986 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 16/208 (7%) Query: 144 EMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 E + P + Y + GD++ A RY A+ + P+ + Y Sbjct: 121 EALAIDP--QFAECYGNMANAWKEKGDIDLAIRYYLTAIQLRPNFCDAWSNLASAYTRKG 178 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A Q N +G + +Y +E++++ + +A Sbjct: 179 RLNEAAQCCKQAL----VLNPRLVDAHSNLGNLMKAQGLVQEAYTCYLEAIRIDPHFAIA 234 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY-THLLSENTVGKLKRALR 316 A + KA ++ K+ P H N+Y + + V +RA Sbjct: 235 WSNLAGLFMEVGDLNKAMQYYKEAVKLKPSFADAHLNQGNVYKAMGMLQEAVACYQRA-- 292 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQA 344 + + + ++ I E +D A Sbjct: 293 -LQARPDYAMAYGNLATIYYEQRQLDMA 319 >gi|262199345|ref|YP_003270554.1| hypothetical protein Hoch_6186 [Haliangium ochraceum DSM 14365] gi|262082692|gb|ACY18661.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365] Length = 2910 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 82/259 (31%), Gaps = 16/259 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 E +A + R + + + D A ++ A + P+ Sbjct: 365 EGDERVAAAHFIRLTAEAERRGDPDVGFCASLAAAELQPDEKQAAQHYQHAAALHPEHRA 424 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 E + +++ + W + L ++ ++ E A L+ + + G + Sbjct: 425 SGETLAERFTAEERWDE-LAELLARRIDSSEQREQVADLVRLAEILHRHLGRDEQARERL 483 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 + K+ SI A A+ ++ ++R A L + AN++ E Sbjct: 484 ARARKIDPVSIPALELEAELDLAAGQRRAAIERLGHV---------ANLWLRQDDEQAAA 534 Query: 310 -KLKRALRLEEINKESVESLVIVSKIALEMGSIDQA-HAKAMLAMKIAPRKEIFLLLAQI 367 R L + E E+ + + +A + A+LA + +L Q+ Sbjct: 535 HAFARTGTLWALEGELEEADNAFGEALALSENAPEALYGAAVLAAQRGKHAAATMLFEQL 594 Query: 368 EQA-NSHNTDKILYWTQSA 385 + + + A Sbjct: 595 DAVEERTPAQRARHRLALA 613 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 63/216 (29%), Gaps = 17/216 (7%) Query: 143 LEMMLQ-IPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 E + + +Y ++ A R +A +PD + + + + Sbjct: 2229 YERLSEPRHRAHLLLRRGRIYRDALEREAE--AYRCFKQAHSAAPDDGEIAGELRRLAMA 2286 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 EW+ A L ++ A + A+ + L + D + +L L Sbjct: 2287 RGEWAIAAELLRREIAAAPTTDAAGALEMELAVLYDEHLLDAERARQHYERALALAPALP 2346 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEE 319 A A+ + A + E H + + L RA E Sbjct: 2347 GAPRPLARLYELAGRHADAAHMNEMA------------AAHARDDFQRSRLLYRAAVSAE 2394 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ + + AL + A A +++ Sbjct: 2395 RTGDAAGARRLYHLAALAAPEGEDASASHRALVRLD 2430 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 7/180 (3%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A G+++ A + ++ + H E L +++AL A + Sbjct: 2600 AYRRGVIAETLGYQREALESYARAVEIRPAHREALDA--LLRLALERGDLPRAIHASRAL 2657 Query: 147 LQIPATREFAVYSLYFESC-----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + + + SL R GDL++A YA + P + E +V+ Y Sbjct: 2658 IDLMPADDVGSISLARLRLAALCERAGDLDAALEYAEMVVSEEPGSQTALEVLVRLYEQK 2717 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 RA L + + A+L LE + D+ ++ ++++ L + + Sbjct: 2718 GAHDRAALALRRLIGLVSTPVQRAALLYHLGELERVHRHDLDSAADAYLKAIDLDPHHVP 2777 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 87/282 (30%), Gaps = 28/282 (9%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 + T L LL + + + A + LY R+ Sbjct: 2496 KSQAEATHDWTALASLLNARAVSLKDRNERAAVYYD----------LGR--LYQ--VRLD 2541 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D SA + + L P P EA+ + +W RA + + L Sbjct: 2542 DPESAVKAFERTLAADPAHPAALEALGELAFAQSDWQRARQLYARLRPETCAMPSEE--L 2599 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R + G + ++++ A + + + +A + Sbjct: 2600 AYRRGVIAETLGYQREALESYARAVEIRPAHREALDALLRLALERGDLPRAIHASRALID 2659 Query: 289 VNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + P ++ +I + + L+ A + S +L ++ ++ + G+ Sbjct: 2660 LMPADDVGSISLARLRLAALCERAGDLDAALEYAEMVVSEEPGSQTALEVLVRLYEQKGA 2719 Query: 341 IDQAHAKAMLA--MKIAPRKEIFLL--LAQIEQANSHNTDKI 378 D+A + P + LL L ++E+ + H+ D Sbjct: 2720 HDRAALALRRLIGLVSTPVQRAALLYHLGELERVHRHDLDSA 2761 >gi|242012383|ref|XP_002426912.1| smile protein, putative [Pediculus humanus corporis] gi|212511141|gb|EEB14174.1| smile protein, putative [Pediculus humanus corporis] Length = 712 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 59/188 (31%), Gaps = 33/188 (17%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 +++ Y + +W + N + A + + D G++ + Sbjct: 424 AIVFLIRSYERSSDWKTEESLFN----SGSLVCPLNAKVHYNIAKSAVDSGNIDKGIKEY 479 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 E+++L N A A L SQ + ++AE +L K + E Sbjct: 480 REAIRLFPNYDQALNNLANILKSQGELKEAEDMLRKA-------------LDIRKEFPAA 526 Query: 310 KLKRALRLEEIN----------------KESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + L +IN K + + + L D+A A+K Sbjct: 527 WMNLGIVLTQINKYSEAEECYKNALKYRKYYPDCHYNLGNLYLAQKKYDEAEMAWTSAIK 586 Query: 354 IAPRKEIF 361 + P + Sbjct: 587 LKPTMSLA 594 >gi|124485501|ref|YP_001030117.1| extracellular ligand-binding receptor [Methanocorpusculum labreanum Z] gi|124363042|gb|ABN06850.1| Tetratricopeptide TPR_2 repeat protein [Methanocorpusculum labreanum Z] Length = 1073 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 63/210 (30%), Gaps = 17/210 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + AR + + + +Y A + +++ A Sbjct: 438 AGDA-AARVLAKSPDNIAALER-------HAESMMLAGKYKEAAGSWQKLVEAAPENTLA 489 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV--QQYVLAKEWSRAITFLNQK 214 L G A++ A L +T ++ + A + A+T + + Sbjct: 490 YIGLLKACSGTGKYAEAEQLAGHLLK-EYQPRDLTITLLAGDAALSAGNYEEAVT--HYQ 546 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 A N + + + E GD + + ++ + + + Sbjct: 547 NAVALSSNTPAPYIGLGSAYEML--GDYEKAVEAFSSADEILPDRPGILLNLGRVQAEAG 604 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + + A I +N HP+IA H+ + Sbjct: 605 QNKAAAQTYLGI--MNNHPDIAGAAVHVTT 632 Score = 38.0 bits (87), Expect = 4.1, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 6/170 (3%) Query: 112 QQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + T + L + +Y A + ++ S +IG+ Sbjct: 886 AELTLKDPENTAALFGYAEMLSRMGKYPEAVRHFDKLIGKYPRNSLLHIEKALASIKIGE 945 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 T A P P+V + ++ + A+ ++ + L Sbjct: 946 PADITSDMTTAAQADPKNPYVLSGLGFMQMVTGHPTEALAAFDKAETAGC----KDPDLN 1001 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R L + + A LK + + A A+SL S + ++A Sbjct: 1002 FCRGLIYLQQNRFDMAEKAADHILKNDPDHMPAMHLKARSLESVGRLKEA 1051 >gi|21229444|ref|NP_635366.1| hypothetical protein MM_3342 [Methanosarcina mazei Go1] gi|20908041|gb|AAM33038.1| conserved protein [Methanosarcina mazei Go1] Length = 417 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 48/168 (28%), Gaps = 11/168 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+G A + KAL + A + AI + K R Sbjct: 157 RLGQQEKALEASEKALAFNSRLAGAWHAKGSALSDLGRYEEAIQAYDAALKIKPNMAR-- 214 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++ + S +LK+ ++ A + K +KA K Sbjct: 215 --AWEGKAFALYSLDRPVESIIAYDSALKINPDNAKTWTGKAMVHLRLGKYKKALDPCNK 272 Query: 286 IWKVNPHPEIANIY----THLLS-ENTVGKLKRALRLEEINKESVESL 328 + P+ A+ + L + L R I+ E ++ Sbjct: 273 AITIK--PDSADAWYCKGVALSGLDKDEEALGALERAIRIDPEHADAR 318 >gi|312795458|ref|YP_004028380.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica HKI 454] gi|312167233|emb|CBW74236.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica HKI 454] Length = 391 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 91/256 (35%), Gaps = 27/256 (10%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +L R+ A+Y L + + G L+ A+ + Sbjct: 84 GETERAIRVHQNLLSREDLPANERDHALYELGQDFLKAGLLDRAEETFQRLHSGGYALG- 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLENADKGDMIASYHD 248 A++ + + K+W +AI + + ++ + + E + + + Sbjct: 143 ALRALLTIFEIEKDWHKAIEAAQRIEAMGVPPLDKEISQFHCELAQEALQHKRIDEARNA 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN-- 306 ++L+ ++ A+I + ++ ++ +A ++ + NP Y L+++ Sbjct: 203 LQQALRCNPQNVRATILSGDVEMACHEPTRALEHWRQVEQQNP------AYLPLVADKLM 256 Query: 307 -----TVGKLKRALRLEEINKESVESLVI------VSKIALEMGSIDQAHAKAMLAMKIA 355 T + A L + + ++ ++++ + A + + +A Sbjct: 257 QAYAATGQSAQGAALLTRYVEAYPSNDLLDAAYKHIAELRGAQAAHALARTQMQKSPNLA 316 Query: 356 PRKEIFLLLAQIEQAN 371 LL AQI A+ Sbjct: 317 GMTR--LLEAQIAVAD 330 >gi|225619887|ref|YP_002721144.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] gi|225214706|gb|ACN83440.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1] Length = 612 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 17/179 (9%) Query: 71 MLFHMLHKR---NYDKGY-----------KAL-YTGLMSIAAHNIPLA-RKMHSYVSQQH 114 L +R KGY +AL Y GL+++ +A + V + Sbjct: 144 TLGRFYMERDLPRLAKGYYERVLTLEENDEALFYVGLIALNEGFQSVAYDTLTKLVRRSK 203 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 + + +L I + + A E L T+ ++ L ++ D + + Sbjct: 204 GEYADKAATIL-GDIYVISGDTDSAIEMYLKSLVNSDTKPDSIKRLVKIYEQVEDYDGIK 262 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + + L+ +P+ A+ + Y + RAI + + K N A L+A + Sbjct: 263 KVYEQILEQNPNDVDTILALGELYEKENAYDRAIKYYLKLVKMKDYTNTYGATGLLANA 321 >gi|253701958|ref|YP_003023147.1| radical SAM protein [Geobacter sp. M21] gi|251776808|gb|ACT19389.1| Radical SAM domain protein [Geobacter sp. M21] Length = 564 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 SY +Q+ ++ +L + + + A M++ + V L R Sbjct: 428 ASYAAQRALLGYCFVTEMLCAESLEQQGDWEGALRLYRGMVKAEPDNPWGVLQLGGLQAR 487 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +GDL A R KAL + P A+ + + + A + + K Sbjct: 488 MGDLKGASRSYQKALQLVPRHLPALLALGELALAQGDGPGAARYYAEALK 537 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 4/93 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GD A R + PD PW + + A + + Sbjct: 452 EQQGDWEGALRLYRGMVKAEPDNPWGVLQLGGLQARMGDLKGASRSYQKALQLVP----R 507 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCD 257 L+A +GD + E+LKL Sbjct: 508 HLPALLALGELALAQGDGPGAARYYAEALKLDP 540 >gi|119509498|ref|ZP_01628646.1| TPR repeat protein [Nodularia spumigena CCY9414] gi|119465904|gb|EAW46793.1| TPR repeat protein [Nodularia spumigena CCY9414] Length = 292 Score = 43.8 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 14/144 (9%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------- 176 +L Q + + +L A+ + +A Sbjct: 119 VLLAQAKQQMGDLEGSAQAYRSILDTKPGDLKALQGMVALLVDQQRPEAAIGLLEDTLSN 178 Query: 177 ATKALDISPDAPW--VTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 A A I P + + ++ + K + A + +Q K K+ R +L A++ Sbjct: 179 AEPANKIQPGSVDTVAIQVLLGTVHASQKRYPEATSIYDQAIK--KDPQDFRPVL--AKA 234 Query: 234 LENADKGDMIASYHDAIESLKLCD 257 + ++G + + ++ L Sbjct: 235 MLFREQGKVEEAKPLFDSAVALAP 258 >gi|329851367|ref|ZP_08266124.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] gi|328840213|gb|EGF89785.1| tetratricopeptide repeat family protein [Asticcacaulis biprosthecum C19] Length = 638 Score = 43.8 bits (102), Expect = 0.072, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 73/234 (31%), Gaps = 29/234 (12%) Query: 122 VYLLEVQIALAERQYNIAHEK----------LEMMLQIPATREFAVYSLYFESCRIGDLN 171 L Q+A + + + A + + Q + GD Sbjct: 7 AQLKAAQMARQQGRNDDALARLAHLQTLYPRFSRLYQEQGHCHVGL----------GDTA 56 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 SA +A+ ++P P + + Q Y L + Sbjct: 57 SAIAALQEAVRLNPTLPASWDMLEQLYRLTG------VPAQAAAAAQTLAQLRSLPPQVV 110 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + GD+ + + L ++I A+ A+ L + +AE +LE++ P Sbjct: 111 VANSLYADGDLKEAEDVIRDYLDCDADNIGAARMLARILNDDGRLDEAEALLEEVLARAP 170 Query: 292 --HPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 H + L S+ + ++A L N + + L + + +G + Sbjct: 171 DYHAARLDYALVLLQSQKPLPARQQAEHLLAHNPDHRDYLKQYAAACVALGDYE 224 >gi|297538184|ref|YP_003673953.1| hypothetical protein M301_0992 [Methylotenera sp. 301] gi|297257531|gb|ADI29376.1| Tetratricopeptide TPR_2 repeat protein [Methylotenera sp. 301] Length = 1193 Score = 43.8 bits (102), Expect = 0.072, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 72/220 (32%), Gaps = 22/220 (10%) Query: 91 GLMSI--AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL + A +P A + E L L + + + A +L Sbjct: 213 GLGAAFQATGQLPGAEANFRKAIAINPNDAEALSNL--GGVLKTLGRLSEAEICYRTLLT 270 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 I L +G++ + KAL I+ + +S A Sbjct: 271 ITPENFDTYIKLGSLLKSMGNIAESTACFKKALSINSQLEEAQNDLGLALAEQGRYSEAE 330 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY------HDAIESLKLCDNSIMA 262 K + +A + +L N + + + DA E+L + S+ Sbjct: 331 ACYQNAIKIEPNF--WKAYNNLGLTLYNMGRFNEAEAAFDKAITLDANEALIYSNLSLP- 387 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 L++Q + ++AE L + +VN PE N Y +L Sbjct: 388 -------LVAQGQIKRAEACLRRAIEVN--PEYVNAYINL 418 >gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 747 Score = 43.8 bits (102), Expect = 0.072, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 66/207 (31%), Gaps = 22/207 (10%) Query: 161 YFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 E+ R +G A +AL + PD + V + AI + Sbjct: 78 LGEAYRGLGKFEEAVASFRRALQLKPDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKP 137 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNK 275 ++ L IA + + +A E L+ A A L Q + Sbjct: 138 DYVDAHNNLGIALARQGV--------MTEATEVLRRALQLAPADAGAWNNFGIVLAEQGR 189 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLV 329 +A + ++ P H N L E+ V +RA E+ +S E Sbjct: 190 FGEAVEAYRRALELAPNQPEAHNNFGNACKELGQFESAVAAYRRA---VELRPDSAEFQA 246 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356 + E G D+A A A+ + P Sbjct: 247 NLGNGLREQGRFDEAMAAYRHALALQP 273 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 78/277 (28%), Gaps = 13/277 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G+ ++ LA + + V+ N V+ + ++ A LQ+ Sbjct: 45 GVAAMQTGRAELAVNLLNRVAA--LVPNHPAVHSNLGEAYRGLGKFEEAVASFRRALQLK 102 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A Y+L G L A + L + PD + + A Sbjct: 103 PDDVLAQYNLGNVLVEWGKLEEAIAAYRRVLTLKPDYVDAHNNLGIALARQGVMTEATEV 162 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L + + A A + A++G + +L+L N A + Sbjct: 163 LRRALQLAPA----DAGAWNNFGIVLAEQGRFGEAVEAYRRALELAPNQPEAHNNFGNAC 218 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESV 325 + A + ++ P+ A +L + + + Sbjct: 219 KELGQFESAVAAYRRAVELR--PDSAEFQANLGNGLREQGRFDEAMAAYRHALALQPKRA 276 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 E+ + G +D A +++ P + Sbjct: 277 ETHHEMGNALAGQGQLDAAVLAYRATLELKPDYGVAR 313 >gi|148256898|ref|YP_001241483.1| SPINDLY family O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. BTAi1] gi|146409071|gb|ABQ37577.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family [Bradyrhizobium sp. BTAi1] Length = 739 Score = 43.8 bits (102), Expect = 0.072, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 106/318 (33%), Gaps = 39/318 (12%) Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 + K+N + L + + A A+ + + H + L +LL AL Sbjct: 14 RMQKKNRKQADGLLTQAVAAYRAGRHADAQAVCGQILALVPDHFDAL-HLLGA-SALDNG 71 Query: 135 QYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + ++A + L + P E A L S + A+ +A+ + P+ Sbjct: 72 RLDLAEQALTRAVAVEPRNAEAQANLGLVLSSLKR--YEEARAAQERAIALKPNFATALT 129 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR---SLENADKGDMIA 244 + + + +++AI ++ ++ NR A LL+ R + ++ ++ +A Sbjct: 130 GLGNTLMNMRLFAQAIEAHDRAIALKPDFADAYCNRGMAQLLLLRNEEARQSFERALALA 189 Query: 245 SY------------------HDAIESLKLCDNSIM--ASICA--AKSLISQNKKRKAEVI 282 A+ + A++ A + + + ++AE Sbjct: 190 PRHMQATFGKGLVSVNLRHFDQALVAFNAALALKPGAAAVIAQRGRLYVQMGRFKEAETD 249 Query: 283 LEKIWKVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + P + + +L++ + R+ E N S +L + G Sbjct: 250 FDTALTAEPMLEAALLGKAHVCVLTDRIAPAMAACKRVLEHNPASEIALAWLGACFARQG 309 Query: 340 SIDQAHAKAMLAMKIAPR 357 A A++I P Sbjct: 310 DTAAAIQHFDRALEIKPD 327 >gi|325914215|ref|ZP_08176565.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas vesicatoria ATCC 35937] gi|325539470|gb|EGD11116.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas vesicatoria ATCC 35937] Length = 929 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 95/311 (30%), Gaps = 44/311 (14%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQ-----------IAL 131 AL G ++ A N+ +A + + V + E L L L Q A Sbjct: 283 ALSEGFRALNAGNLGVAEQRFTQVLRARARDAEALGGLGSVRLRQQRFAEAQELLRPAAA 342 Query: 132 AERQYNIA---HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 ++ A + + Q + GD+ A++ +++ + P+ P Sbjct: 343 NSGKWKGALDSARYWQQLQQAD------------AARTRGDIAQARQLVEQSVQLLPNEP 390 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGDMIASY 246 + A + A + + + L +R ++ ++ Sbjct: 391 -AGHVALGGLQSASDPVAAEASYRKALSRDADNAGALQGLVGLYSRQGRMSEASELFNRL 449 Query: 247 HDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299 A + + + +++ A+ + A+ LE P ++A +Y Sbjct: 450 PAAERAKSGGEALLRSNVQRARARQSLEAGDAVSAQAELEAAMVERPGDAWIRLDLARLY 509 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM--LAMKIAPR 357 + + L ++ + E+L + +A E G A+ A P Sbjct: 510 QQAGRPDQARSV--MDGLLAVHGDQPEALHANALLAQESGDWQGAYDSLDRIPAAARTPE 567 Query: 358 KEIFLLLAQIE 368 A IE Sbjct: 568 MTQLRTTAWIE 578 >gi|331646606|ref|ZP_08347709.1| putative heat shock protein [Escherichia coli M605] gi|281178472|dbj|BAI54802.1| putative heat shock protein [Escherichia coli SE15] gi|330911148|gb|EGH39658.1| putative periplasmic heat shock protein YciM, precursor [Escherichia coli AA86] gi|331045358|gb|EGI17485.1| putative heat shock protein [Escherichia coli M605] Length = 389 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 62/281 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL +Q +A Y+ A + + T Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQ--RLLAIQQLGRDYMAAGLYDRAEDMFNQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++Q Y EW +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLQIYQATSEWQKAIDVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ R A +L++ D+ + + NS SI + ++ Sbjct: 167 LVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMA 226 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV- 331 + + KA L+++ + L+SE +L + + + V Sbjct: 227 KAEYAKAVESLQRVISQD---------RELVSETLEMLQTCYQQLGKTAEWAEFLQRAVE 277 Query: 332 ----SKIALEMGSIDQAHAKAMLA-------MKIAPRKEIF 361 + L + I +A + A ++ P +F Sbjct: 278 ENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVF 318 >gi|326316278|ref|YP_004233950.1| type IV pilus biogenesis/stability protein PilW [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373114|gb|ADX45383.1| type IV pilus biogenesis/stability protein PilW [Acidovorax avenae subsp. avenae ATCC 19860] Length = 280 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 4/124 (3%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L F R+GD SA +ALDI+P P++ K ++ A F ++ Sbjct: 101 LRGLVF--MRLGDWPSADDSFRRALDINPQEPYLLHNYGWLRCQQKNYAEAERFFDRAL- 157 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A RA L+ + L G + + ++ +L + + A + Sbjct: 158 -AVPSYTARAKTLMTQGLCQERAGQVAEAEKTLAKAYELDAGNPVVGYNLASMAFRRGDA 216 Query: 277 RKAE 280 ++A+ Sbjct: 217 KRAQ 220 >gi|325181663|emb|CCA16115.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 620 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 82/265 (30%), Gaps = 24/265 (9%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A ++ A ++ + H ++ +Q E E IP ++ Sbjct: 339 AGDMTQAEALYRDALNIYPDHVPSIMSFAILQA--RGGNVQAGRELFEQ--SIPIVKKVG 394 Query: 157 ----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + E + G+L+ A++ + P ++ + A L Sbjct: 395 SLLFAWGSFEE--QYGELSHAKQILEETTAKEPMHLEAWRSLARVENKLGNSENARVVLT 452 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + ++ + N LLI + ++ + ++L+L + A + Sbjct: 453 RAAQHVE----NNIPLLIQLAKNEERNHNIDEARRALEKALELDKENGSVWNLRALLELR 508 Query: 273 QNKKRKAEVILEKIWKVNP------HPEIANIYTHLLS--ENTVGKLKRALRLEEINKES 324 +K ++E K P H + Y L+ ++ K + ++ + Sbjct: 509 I-DPKKTRSLVESALKCIPEHEAHTHSILYCTYGRALAMVQDYEAAAKAFEKSLQLIPRN 567 Query: 325 VESLVIVSKIALE-MGSIDQAHAKA 348 E+ VI L + A Sbjct: 568 PETHVIYVDSVLIPSERWNDAEKHL 592 >gi|77458879|ref|YP_348385.1| hypothetical protein Pfl01_2654 [Pseudomonas fluorescens Pf0-1] gi|77382882|gb|ABA74395.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 351 Score = 43.8 bits (102), Expect = 0.073, Method: Composition-based stats. Identities = 47/337 (13%), Positives = 99/337 (29%), Gaps = 41/337 (12%) Query: 41 PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100 + L ++ AW+ L + + P + H GY L + A Sbjct: 8 LLISLGLVLALFVAWLSLRSTAPVV---PEAIKH---------GY---SEALAAARAGQP 52 Query: 101 PLARKMHSYVS------QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-TR 153 AR ++ + ++ + + L Q + I + T Sbjct: 53 GAARVLYQQLGRPDLSVKRRVWLHAELPNYPSPQALKLADADLQNQSPEVRLAAIKSVTG 112 Query: 154 EF--AVYSLYFESCRIGDLNSAQRYATKAL-DISPDAPWVTEAVVQQYVLAKEWSRAITF 210 SL + + + A AL +SPD + A +QQ I Sbjct: 113 LVPGGQRSLLLGPLLDDEDQTVRFAAINALLGLSPDQLGLYFAPLQQ---------GIDV 163 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 Q K+ E A + ++ + ++L+L ++ A + + L Sbjct: 164 WEQALKSQPES----AANYAQLARLYLHNAELKQAQQALEQTLRLDPGNLPALVMQIEVL 219 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVES 327 Q + A +L + K P L + L + E+ ++ + Sbjct: 220 DRQGQSDAARQLLARQLKAQPDSAYLQHALGLWLLHHDQREYALLGLSKAVELEPDNKDY 279 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 ++ ++ A + ++ P +L Sbjct: 280 RYDLATTLHSAEELEAAQKQLQEIVQRHPADRKARVL 316 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 21/200 (10%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIA-------RSLENADKGDMIASYHDAIESLKLCDN 258 A L Q+ + R L ++L+ AD S + ++K Sbjct: 53 GAARVLYQQLGRPDLSVKRRVWLHAELPNYPSPQALKLADADLQNQSPEVRLAAIKSVTG 112 Query: 259 SIMA---SICAAKSLISQNK-KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + S+ L +++ R A + + ++P ++ + L V Sbjct: 113 LVPGGQRSLLLGPLLDDEDQTVRFAA--INALLGLSPD-QLGLYFAPLQQGIDV-----W 164 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN 374 + + ES + ++++ L + QA +++ P L++ QIE + Sbjct: 165 EQALKSQPESAANYAQLARLYLHNAELKQAQQALEQTLRLDPGNLPALVM-QIEVLDRQG 223 Query: 375 T-DKILYWTQSALHAMPDPL 393 D L A PD Sbjct: 224 QSDAARQLLARQLKAQPDSA 243 >gi|296220726|ref|XP_002756432.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 1 [Callithrix jacchus] Length = 478 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 17/149 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + Sbjct: 223 LALKLQDEGQEAEGEKYVEEALTSMSSQTYVFRYAAKFYRRKGSVDKALQLLKMALQATP 282 Query: 220 EW---NRNRAILLIARSLENADKGD----------MIASYHDAI----ESLKLCDNSIMA 262 + + A+ ++ + + AI +++ +A Sbjct: 283 TSAFLHHQIGLCYKAQVIQIKEAAKGQPRGQNRERVDKMIRSAIFYFESAVEKKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP 291 + A+ I RKAE I +K+ ++NP Sbjct: 343 HLDLARMYIDAGNHRKAEEIFQKLLRMNP 371 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 19/149 (12%), Positives = 46/149 (30%), Gaps = 24/149 (16%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L+ D+G E+L + AAK + KA +L+ + P Sbjct: 223 LALKLQDEGQEAEGEKYVEEALTSMSSQTYVFRYAAKFYRRKGSVDKALQLLKMALQATP 282 Query: 292 -----HPEIANIYTHLL-----------SENTVGKLKR--------ALRLEEINKESVES 327 H +I Y + ++ + E + Sbjct: 283 TSAFLHHQIGLCYKAQVIQIKEAAKGQPRGQNRERVDKMIRSAIFYFESAVEKKPTFEVA 342 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++++ ++ G+ +A +++ P Sbjct: 343 HLDLARMYIDAGNHRKAEEIFQKLLRMNP 371 >gi|149631899|ref|XP_001506573.1| PREDICTED: similar to KIAA0155 isoform 2 [Ornithorhynchus anatinus] Length = 1165 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 104/306 (33%), Gaps = 43/306 (14%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517 Query: 141 EKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + + + P + + L + G+ A + +AL I+ D P + ++ Sbjct: 518 KLYKNILREHPNYVDCYLR-LGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHL 576 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHD 248 +EW + K N ++L + R E +K + Sbjct: 577 AKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAI 635 Query: 249 AIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANI 298 + L+ N A ++ A K + + R+A + +W +A+I Sbjct: 636 YKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHI 690 Query: 299 YTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y + ++ + + ++ E ++ +++ + G + + + A +AP Sbjct: 691 YVEQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAP 748 Query: 357 RKEIFL 362 + + Sbjct: 749 SDTVLM 754 >gi|329115092|ref|ZP_08243847.1| TPR repeat-containing protein [Acetobacter pomorum DM001] gi|326695535|gb|EGE47221.1| TPR repeat-containing protein [Acetobacter pomorum DM001] Length = 630 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 96/298 (32%), Gaps = 11/298 (3%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 AR M + E + L E+QI A E L + Q A L Sbjct: 331 EAARLMLGFALAMDPTLAEARLMLAEIQIDEDHG--AAARETLLRVPQSDPMSPVARLRL 388 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 A + PD + A+ V K+W AI + A Sbjct: 389 AVLDSTPDQATEAVNLLRPLVAQLPDQILLQRALGNALVQQKDWKGAIAAYTKAIDLATA 448 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKA 279 LL R++ + GD + DA +L + M S++ ++ +A Sbjct: 449 QKDVDWTLLFLRAMVYHEMGDWPHARDDARAALAYAPDESMLLNFLGYSMVERHENLPEA 508 Query: 280 EVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 E +L K +++ P+ A I + + L + E E E + ++ Sbjct: 509 EKLLRKAHQLS--PDDAAITDSLGWVRAERGDLNEALDLLEKAAEKTPEDPEVNYHLGEV 566 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G +A + +A+ + P L+ A +++A K A A D Sbjct: 567 YWRQGRKTEAIDQWNVALGLHPIPSDEVLIRAALKRAGVEPDVKKADQAAPAKVAPQD 624 >gi|325202341|gb|ADY97795.1| tetratricopeptide repeat protein [Neisseria meningitidis M01-240149] gi|325207906|gb|ADZ03358.1| tetratricopeptide repeat protein [Neisseria meningitidis NZ-05/33] Length = 614 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 72 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 242 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302 Query: 321 NKESVESLVIVSKIALEMGSIDQAHA----KAMLAMK--IAPRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + A A ++ L A + A+ + Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTEEQRSRAALTAAMIYADRRD 358 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 359 YAKVRQWLKK-VSAP 372 >gi|195434541|ref|XP_002065261.1| GK14760 [Drosophila willistoni] gi|257096369|sp|B4MUQ2|FICD_DROWI RecName: Full=Adenosine monophosphate-protein transferase FICD homolog gi|194161346|gb|EDW76247.1| GK14760 [Drosophila willistoni] Length = 498 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 68/239 (28%), Gaps = 41/239 (17%) Query: 25 PE--DVSITWGNRLYRTSPFVILSILYFFLFAWIL----LFAVSRFFLSCPAMLFHMLHK 78 P + + R + L+ + L LF R P H L Sbjct: 27 PGNPHFQVQFHVTSCRFAFLAFLAGSFLAFSLHALISSNLFWRLRQLHHLPTA--HYLQT 84 Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKM-----------HSYVSQQHTFHNEYLVYLLEV 127 R+ ++ + + A K +Y + T E L L Sbjct: 85 RDE-----------FAVYSVDELNAFKEFYDKSTADSVGATYTEAEETNIKEALSSLRLA 133 Query: 128 QIALAERQYNIAHEKLE-MMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISP 185 Q + + A E + P E + + E + + + Q Y AL I+P Sbjct: 134 QDMYMAGKDDKAARLFEHALALAPRHPEVLLRYGEFLEHNQRNIVLADQYYFQ-ALTINP 192 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + + L++++ + + R A+ I + + A Sbjct: 193 SHSEA-------LANRQRTADVVQTLDERRLASLDAKRA-ALSAIHEANSALRRAKKEA 243 >gi|194748531|ref|XP_001956698.1| GF24452 [Drosophila ananassae] gi|190623980|gb|EDV39504.1| GF24452 [Drosophila ananassae] Length = 1164 Score = 43.8 bits (102), Expect = 0.074, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 24/263 (9%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPEKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKI 334 ++ E E +E+ + +++I Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI 421 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 34/240 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D + Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 +Y A L+ I A I A + A+ LE Sbjct: 433 AYGTASSILREKAKYEIPAEIQNNVASLHYRLGNLKMAKETLESA--------------- 477 Query: 302 LLSENTVGKLKRALRLEEINKESVES-----LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK A + + + ES ++++ M S D A +K P Sbjct: 478 ---------LKHATSEMDKDVKYYESIQVTMKYNLARLNEAMSSYDVADKLYKEILKEHP 528 >gi|295102481|emb|CBL00026.1| Protein kinase domain [Faecalibacterium prausnitzii L2-6] Length = 719 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 105/355 (29%), Gaps = 53/355 (14%) Query: 42 FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIP 101 +S++ +LF V R + Y AL Sbjct: 334 VAAVSLVLAVSGTLAILFGVQRI------GVERYA-------AYDALVR--------KGR 372 Query: 102 LARKMHSYVSQQHTFHNEYLVY--LLEV---QIALA--ERQYNIAHEKLEMMLQIP---- 150 A + + +Y LE Q L + +Y + +E Sbjct: 373 TAADEMRFDEAEQDLQQAIAIYDDQLEAYVEQAVLLYRQGKYQECIDAVETTQSRELKYY 432 Query: 151 -ATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 +Y++ E+ + SA KA+ SPD + + ++S A Sbjct: 433 SRQSVANLYNVAAEAYYELESYESAATMYQKAIGYSPDILSYYQGEATALIQLGDYSGAD 492 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN---SIMASIC 265 L + K + ++ A ++ L +GD+ + A +++ D A Sbjct: 493 EVLAEMAKAVPDAEQSGAYQVVQSEL-LRKQGDLPDALDAARKAIGSADGNDQLARAYRL 551 Query: 266 AAKSLISQNKKRKAEVI---------LEKIWKVNPHPEIANIYTH-----LLSENTVGKL 311 AA +E I L + ++A+ Y L Sbjct: 552 AASICEDIGDSMLSEEINLLNQGIEQLPDGYYNALAGQLASAYIRQAEATGNPGYQKDAL 611 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365 + +LE+ ++E + ++ + ++ +A K P ++ LA Sbjct: 612 RTYQQLEKNGNTTLEVRLNIAMLQYQLHDFSKAMEMLQALKKDYPKDYRVYKWLA 666 >gi|260893000|ref|YP_003239097.1| glycosyl transferase family 2 [Ammonifex degensii KC4] gi|260865141|gb|ACX52247.1| glycosyl transferase family 2 [Ammonifex degensii KC4] Length = 414 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 71/245 (28%), Gaps = 44/245 (17%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNS 172 ++ +V + Y+ A + + + L G+ + Sbjct: 201 PDDPVVNFHLGVEYFRQGNYSRATQAFLRAAAGSSPAVVYGPKLLKYLVQSLYLAGEKDE 260 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAI-- 227 A R AT L + PD P++ A +++ A Q + + + A+ Sbjct: 261 ALRAATNGLAVYPDHPYLHFARGVLLFEKGDYAAAQEAFLQARAHRQCPAYYAVEEAVTG 320 Query: 228 --LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L ++GD+ + + +++ + A L R+ Sbjct: 321 YQTLYYLGRCAEERGDLEEALAHYLAAVRENTEFVPAVARIVHIL----NPRE------- 369 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 E+TV L R L + I+++I L G+ + A Sbjct: 370 -----------------YPEDTVESLNRVFDLSA-----PRARRILAEIFLAEGAAELAR 407 Query: 346 AKAML 350 Sbjct: 408 RFLQA 412 >gi|262198980|ref|YP_003270189.1| hypothetical protein Hoch_5820 [Haliangium ochraceum DSM 14365] gi|262082327|gb|ACY18296.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 277 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 35/118 (29%), Gaps = 4/118 (3%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D +A + +ALD+ DA + + + + + + A + Sbjct: 152 ALEEVDPEAAVKAYERALDLRRDAGEIWINLGRLHAESGRSTEAARCFREALAIEPA--- 208 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + D+G + +L++ A A R A Sbjct: 209 -DATALYNLGVVAQDEGRDGEAIELYRRALRIEPTLAEAHYNLATLFDRGGDTRAAIR 265 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 31/97 (31%), Gaps = 2/97 (2%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 D G + G + + A + L L +A E + A Sbjct: 172 RRDAGEIWINLGRLHAESGRSTEAARCFREALAIEPADATALYNL--GVVAQDEGRDGEA 229 Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 E L+I T A Y+L R GD +A R+ Sbjct: 230 IELYRRALRIEPTLAEAHYNLATLFDRGGDTRAAIRH 266 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 6/126 (4%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIP 150 +++ + A K + E + L L + + A L I Sbjct: 151 VALEEVDPEAAVKAYERALDLRRDAGEIWINLGRLHAE----SGRSTEAARCFREALAIE 206 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+Y+L + G A +AL I P + + + AI Sbjct: 207 PADATALYNLGVVAQDEGRDGEAIELYRRALRIEPTLAEAHYNLATLFDRGGDTRAAIRH 266 Query: 211 LNQKKK 216 +N+ +K Sbjct: 267 INEYRK 272 >gi|261856772|ref|YP_003264055.1| type IV pilus biogenesis/stability protein PilW [Halothiobacillus neapolitanus c2] gi|261837241|gb|ACX97008.1| type IV pilus biogenesis/stability protein PilW [Halothiobacillus neapolitanus c2] Length = 276 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 45/153 (29%), Gaps = 19/153 (12%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + AH +ML R+G+ A R KA + + + Sbjct: 90 DNDFAPAHHAYALMLD-----------------RLGEKEKAAREFEKAYSLDSNNSDLDN 132 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 KE+++A + + + L + +G + + Sbjct: 133 NYGTFLCGQKEYTKAQSLFARA--YGDPLYKTPEFALTNSGVCYESEGKPDQAISQYDAA 190 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A I A+ ++ K +A ++ Sbjct: 191 IVKQPGYGPALIGKARVYYAEKKYAEAANAMKA 223 Score = 37.2 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 26/73 (35%) Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + N+ A + + ++G M + +++ ++ A A L Sbjct: 49 LSSNPTDNQRAAQINTQLGVGYMNEGHMDVAVEKIKKAIYYDNDFAPAHHAYALMLDRLG 108 Query: 275 KKRKAEVILEKIW 287 +K KA EK + Sbjct: 109 EKEKAAREFEKAY 121 >gi|167579766|ref|ZP_02372640.1| TPR domain protein [Burkholderia thailandensis TXDOH] Length = 573 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 90/246 (36%), Gaps = 9/246 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180 +L ++AL A++ + + A + + + D +A + Sbjct: 47 QVLAAEVALQRNLPAPAYQTYLALARDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 105 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 SPD+ + VL + + A L Q+ A NR +AI+ + L A Sbjct: 106 --YSPDSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDNRGQAIIALQALL--ARGP 161 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + + LK N A + A+ ++ + K A L++ ++ P A + Sbjct: 162 NRVGGLTVLQDLLKNDMNRPEARLAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 221 Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + + + N +S + + ++++ L +D A + AM+ + Sbjct: 222 SQMGPGERAAGIASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQF-DAMRRNDSSD 280 Query: 360 IFLLLA 365 L+A Sbjct: 281 PTPLMA 286 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 78/242 (32%), Gaps = 43/242 (17%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q+ LA+ + + A ++ + M + ++ + ++ + L+ A Y + + Sbjct: 250 RLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVK 309 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++ +KK + + L + D+ + Sbjct: 310 VA-----------------------------QKKPGADVGQAYVYL----AQIALDQNNE 336 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEI 295 + + + + A + A+ L Q K +A +L + +PH + Sbjct: 337 ALAAQWLDKVDESSQQYVPAQVTRAQLLQKQGKTDEARKLLANLQASDPHDAAVIARTDA 396 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++ + +L +A E + + + ++G + L M+ Sbjct: 397 SILFASKRYKEAADRLAQA---VEDFPDDPDLRYDYAMACEKIGQFTTMEQQLRLLMRAQ 453 Query: 356 PR 357 P Sbjct: 454 PD 455 >gi|187734887|ref|YP_001876999.1| cytochrome C family protein [Akkermansia muciniphila ATCC BAA-835] gi|187424939|gb|ACD04218.1| cytochrome C family protein [Akkermansia muciniphila ATCC BAA-835] Length = 767 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 5/168 (2%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + H L QIA++ + A L+ AT G Sbjct: 574 AAALHQADQPSGAMKL-AQIAISRKDVKTAELWFSKALKWDATSSVVHRDYAVFLASQGR 632 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A +A+ ++P + + + + S A+ N+ K + R L Sbjct: 633 SREAVDQMQEAVRLAPRDANLWYLLGLGQIENNDESGALESFNEALKIEPSFIR----AL 688 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 R+L N G + + D L + A L + R Sbjct: 689 FNRALLNEKVGRLEQALQDLENCSSLEKGNADIPFTLAVMLYRNGRYR 736 >gi|114777709|ref|ZP_01452669.1| TPR domain protein [Mariprofundus ferrooxydans PV-1] gi|114551925|gb|EAU54459.1| TPR domain protein [Mariprofundus ferrooxydans PV-1] Length = 579 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 80/235 (34%), Gaps = 7/235 (2%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R G+ A + T + P+A ++ + + A + + N Sbjct: 60 AAREGNRELALQLLTALIAKQPNAITPHMQLIDLLMESGRIDEAEQHIARMLSNKALPAE 119 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 R L +A+ + L+ A A L + +A + Sbjct: 120 QREQLQLAQYRIYIAHDQPQLALEKLNTFLQKHPAHDTARTMQASILAGLGRMDEALASI 179 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRAL----RLEEINKESVESLVIVSKIALEMG 339 + + H G LKRA R++ + ++ +++++S +A +M Sbjct: 180 KLG--IKQHESAGLRMLQARLLIKRGDLKRAKASLLRVQHLMPDNDAAVLMLSALAAQMK 237 Query: 340 SIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +QA + P + LA++ A + + I+ + +A HA P+ Sbjct: 238 DHEQAEKLLRDFLANHPQDIRVSHALAKLLVAQARLPEAIIVYRNAAKHAGDSPV 292 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 85/264 (32%), Gaps = 14/264 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A K Q N+ V +L A + + A + L L Sbjct: 203 GDLKRA-KASLLRVQHLMPDNDAAVLMLSALAAQM-KDHEQAEKLLRDFLANHPQDIRVS 260 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++L L A A + D+P V + Y K++ +A+ K Sbjct: 261 HALAKLLVAQARLPEAIIVYRNAAKHAGDSPVVLRPLGMLYFQDKDYEQAVQTFRTLVKL 320 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + + +++ D+ I Y + K+ A I A + +NK Sbjct: 321 QPDDSNRFYLAASLEAMDKLDEAKSI--YTKITHASKM---YTQAQIRLAAMDLQENKLS 375 Query: 278 KA-EVIL----EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 KA +L EK +++ H + L S+ L L + K + L + Sbjct: 376 KAKARMLAILHEKPQQLDAH--LLLSTIRLNSKEYKQVLDETEPLLRLKKLPPQLLFNRA 433 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + DQ ++ +P Sbjct: 434 VAFEHFKNYDQVETTLNRVLEHSP 457 Score = 37.2 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 14/228 (6%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLN--SAQRYATK 179 L Q A E +A + L ++ T + L ES RI + A+ + K Sbjct: 55 LAAQKAAREGNRELALQLLTALIAKQPNAITPHMQLIDLLMESGRIDEAEQHIARMLSNK 114 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL + A + Y+ + A+ LN + + R + + Sbjct: 115 ALPAE-QREQLQLAQYRIYIAHDQPQLALEKLNTFLQKHPAHDTARTMQASILA-GLGRM 172 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + +AS I+ + M A+ LI + ++A+ L ++ + P + A + Sbjct: 173 DEALASIKLGIKQHESA-GLRM---LQARLLIKRGDLKRAKASLLRVQHLMPDNDAAVLM 228 Query: 300 THLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 L+ ++ K + + + ++K+ + + +A Sbjct: 229 LSALAAQMKDHEQAEKLLRDFLANHPQDIRVSHALAKLLVAQARLPEA 276 >gi|94971303|ref|YP_593351.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553353|gb|ABF43277.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 468 Score = 43.8 bits (102), Expect = 0.075, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 33/102 (32%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + + AL + + A + L+ + + + R G A A +A+ Sbjct: 124 NFMAGRFALEQGDRDAAARYFDRALRFKSDDANVLINYAAVLVRTGRPQEALPLAERAVR 183 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +PD+P + + A AI + K + Sbjct: 184 AAPDSPDAWAVLGYANLQADRSKDAIPAFEKSLKLRPDPTVE 225 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + A + ++ + + + A +LI + G + A +++ +S Sbjct: 133 EQGDRDAAARYFDRALR----FKSDDANVLINYAAVLVRTGRPQEALPLAERAVRAAPDS 188 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 A + + ++ + A EK K+ P P + E T Sbjct: 189 PDAWAVLGYANLQADRSKDAIPAFEKSLKLRPDPTVEAFLKRAHKETTTE 238 >gi|302337075|ref|YP_003802281.1| RelA/SpoT domain protein [Spirochaeta smaragdinae DSM 11293] gi|301634260|gb|ADK79687.1| RelA/SpoT domain protein [Spirochaeta smaragdinae DSM 11293] Length = 398 Score = 43.4 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 32/164 (19%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + ++S A+ L K R I L+ R + D + D + + Sbjct: 257 SGDYSGAV-VLYGKILAGSLSKEIRVITLMHRGMARFADADYAGAEEDFLAA-------- 307 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 L S+ + KA H + +Y ++ L E+ Sbjct: 308 ---------LSSEGHRGKA------------HYYLGILYR--VTGRPGQALNAFSAALEV 344 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 N ESL+ ++ ++G ++A + A+++ P E L+L Sbjct: 345 NPYHFESLLGSARALYDLGDTEEALSYCNNALRLMPDDEAALVL 388 >gi|172059230|ref|YP_001806882.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6] gi|171991747|gb|ACB62666.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MC40-6] Length = 828 Score = 43.4 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 86/277 (31%), Gaps = 18/277 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL L A A+ ++ + ++ L + ++ Sbjct: 6 QALQEALAHHQAGRFAQAKTLYDAILHAQ-PGQPDAMHFLGLLACQLKQYDAGLALMERS 64 Query: 146 MLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + + P + ++ E R+ D A + +A+ + PD P + A++ Sbjct: 65 LAERPDASYFNNLGNMLRECGRLDD---AIAHYRRAVALRPDYPEAHNNLGNALRDARDP 121 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A+ ++ + + A D G++ A+ +++ A Sbjct: 122 AEAMQSCSRAIELRPGY----AEAYNNLGNVLQDLGELDAAAASYGKAISFHPAYAEAHS 177 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319 L +Q + A V + ++NP H +A + + R Sbjct: 178 NLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEHAR----AG 233 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + E + + M D A A +I P Sbjct: 234 LEPDDAEGHCTLGRSLRSMNDFDGAARLFERACEIDP 270 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 21/275 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A + H + E L +L Q ++ A +++ Sbjct: 153 GELDAAAASYGKAISFHPAYAEAHSNLGNVLRAQ-----ERHADAIVHYRRAIELNPALR 207 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A L D + A +A + PD + + ++ A + Sbjct: 208 VAHRGLAIALRATDDFDGALEHAR--AGLEPDDAEGHCTLGRSLRSMNDFDGAARLFERA 265 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + A +G+ S +++L A + + + Sbjct: 266 CEIDPGY----APAWCRLGELRCQQGEYEESLRLCRHAIELDPELADAYNFLGLAYHNLD 321 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + +E+ +NP H +A L + R + E+ + V+ + Sbjct: 322 RMAASELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSEYRIAQ--ELGVDPVKIQL 379 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + I A A A++ P + LL Sbjct: 380 TLGDILWAKRDFAGAVAAFREAVEHDPHRAYARLL 414 >gi|33864230|ref|NP_895790.1| TPR repeat-containing glycosyl transferase [Prochlorococcus marinus str. MIT 9313] gi|33635814|emb|CAE22139.1| Glycosyl transferase, family 2:TPR repeat [Prochlorococcus marinus str. MIT 9313] Length = 427 Score = 43.4 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 71/195 (36%), Gaps = 19/195 (9%) Query: 174 QRYATKA-LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAI 227 R A +A L P P+ + V + R I L Q K NA R + Sbjct: 210 LRTAMEAWLAEHPGDPYTCAKLGALEVDEGQKERGIQLLRQGLKQNENTNANPIERYELL 269 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDN---SIMASICAAKSLISQNKKRKAEVILE 284 L + +L + D + E++ L + S+ A + A L+ Q + +A + Sbjct: 270 LHLGIAL---AQDDPQGAVTAYREAVALPMDIRVSLGARLNLAALLMQQEQLDEAIALTT 326 Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 PE+A + +L N V L + +++N E E+ + L G Sbjct: 327 TA--TQQAPEVALAWYNLGLMQRRQGNLVEALYAYEQAKQLNPEHAETHQNHAVAMLVAG 384 Query: 340 SIDQAHAKAMLAMKI 354 I+ A A+ + Sbjct: 385 DINGARNSFNKAITL 399 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 55/182 (30%), Gaps = 22/182 (12%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 + ++G + L GL K + + E LL + IALA+ Sbjct: 237 DEGQKERGIQLLRQGL------------KQNENTNANPIERYE---LLLHLGIALAQDDP 281 Query: 137 NIAHEKLEMMLQIP-ATRE-FAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + +P R +L + L+ A T A +P+ Sbjct: 282 QGAVTAYREAVALPMDIRVSLGARLNLAALLMQQEQLDEAIALTTTATQQAPEVALAWYN 341 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A+ Q K+ E A ++ GD+ + + +++ Sbjct: 342 LGLMQRRQGNLVEALYAYEQAKQLNPE----HAETHQNHAVAMLVAGDINGARNSFNKAI 397 Query: 254 KL 255 L Sbjct: 398 TL 399 >gi|15668984|ref|NP_247788.1| hypothetical protein MJ_0798 [Methanocaldococcus jannaschii DSM 2661] gi|2833599|sp|Q58208|Y798_METJA RecName: Full=TPR repeat-containing protein MJ0798 gi|1499620|gb|AAB98793.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 334 Score = 43.4 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 55/154 (35%), Gaps = 8/154 (5%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + ++A + E + A++ L + D ++ +Y K L+++P+ E + Sbjct: 150 KRDLAIKYFEKASEKDRNNYKALFGLGKSYYLMSDNKNSIKYFEKVLELNPNDVEALEYL 209 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + Y ++ +AI + + + + L++ + + ++LK Sbjct: 210 GELY-YEEDCEKAINYFKKALELKPD----DIDLILKVAFTYFKLKKYKHALKYFEKALK 264 Query: 255 LCDN---SIMASICAAKSLISQNKKRKAEVILEK 285 L N + I + KA EK Sbjct: 265 LNPNVFELEQIYESMGRIYIYLGEDEKAIECFEK 298 >gi|330815900|ref|YP_004359605.1| TPR repeat protein [Burkholderia gladioli BSR3] gi|327368293|gb|AEA59649.1| TPR repeat protein [Burkholderia gladioli BSR3] Length = 390 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 60/153 (39%), Gaps = 6/153 (3%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +L R+ A+Y L + + G L+ A+ + D Sbjct: 84 GETDRAIRVHQNLLNRDDLPVNERDHALYELGQDFLKAGLLDRAEESFHRLADGDYALG- 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A++ Y + K+W+++I + + + + A + E + D A+ Sbjct: 143 AQRALLTIYGIEKDWNKSIQTARRIETMSGSSLSTEIAQFHCELAGEALARKDGAAAAQQ 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 E+L + +++ A+I + ++ + + A Sbjct: 203 LREALAVNPHNVRATILSGEAAEAAGDHQAAIA 235 >gi|288941999|ref|YP_003444239.1| tetratricopeptide repeat-containing protein [Allochromatium vinosum DSM 180] gi|288897371|gb|ADC63207.1| tetratricopeptide repeat protein [Allochromatium vinosum DSM 180] Length = 395 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 83/264 (31%), Gaps = 8/264 (3%) Query: 134 RQYNIAHEKLEMMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ P R FA++ L + G L+ A+ + + + Sbjct: 82 GEVDRAIRLHQNLIERRHLGPELRGFALFELGQDYMSAGLLDRAETLFEELVGLGLHGQR 141 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +A+ + Y ++WSR + Q + + A + E + D + Sbjct: 142 ALQALREIYQRERDWSRCLEVAAQLEALTGQRLTVEIAHYHCELAEEARRRQDPAGAREQ 201 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PEIANIYTHLLSEN 306 + + + + A+I ++ ++ A + +++ + PEI + Sbjct: 202 LSRARDIQSDCVRATILEGFMVLEEDDVAGAAALFKRVAERGATYVPEILPALIESMERL 261 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + + L ++ + + + + A + + Sbjct: 262 GENVIAQLEALAANRAG-PHLMLALGERVEQAHGSEAALDLLADYLARWADLAVLERFLD 320 Query: 367 IEQANSHNTDKILYWTQSALHAMP 390 + S + + + AL Sbjct: 321 LRARESDPDGRAHRYARVALGVAR 344 >gi|168702109|ref|ZP_02734386.1| TPR repeat [Gemmata obscuriglobus UQM 2246] Length = 489 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 69/226 (30%), Gaps = 42/226 (18%) Query: 144 EMMLQIPA-TREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + P T + + + E G+L+ A + + + PD + Sbjct: 182 RELKADPENTHALYMRGIGWREK---GELDKALNDFNECIRLEPDFTSAYLSRGNVLSDR 238 Query: 202 KEWSRAI---------------------------TFLNQKKKNAKEWNR---NRAILLIA 231 +++++AI ++ K+ E R + Sbjct: 239 RQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESIRLNPRYVPAHLT 298 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 R KG+ + + E+L+L I + + ++ + KA +++P Sbjct: 299 RGKAWYGKGEHDKAIANYTEALRLDPRYISPYLHRGLAWAAKGEHDKAIADYSAAVRLDP 358 Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 H ++A + L+ L E+N + ++ Sbjct: 359 KSIYAHQQLAAGWAAKKEYKNA--LRGFETLAELNPRHAYAFHQIA 402 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 57/156 (36%), Gaps = 7/156 (4%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A +++ K E L R + +KG++ + +D E ++L + A + Sbjct: 174 DEAPAHWDRELKADPE----NTHALYMRGIGWREKGELDKALNDFNECIRLEPDFTSAYL 229 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEIN 321 L + + KA ++ + +P +A +T K L +N Sbjct: 230 SRGNVLSDRRQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESIRLN 289 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 V + + K G D+A A A+++ PR Sbjct: 290 PRYVPAHLTRGKAWYGKGEHDKAIANYTEALRLDPR 325 >gi|170030859|ref|XP_001843305.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus] gi|167868424|gb|EDS31807.1| tetratricopeptide repeat protein 37 [Culex quinquefasciatus] Length = 1231 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 61/200 (30%), Gaps = 11/200 (5%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D A++ K + ++P + Y EW L + + A Sbjct: 450 DTARARKCLEKCISLNPAQKEAIILLSSLYRTLGEWDANSKLLQSSVALGATGSGS-AWA 508 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + L + + + ++ +I A A + + + A + EK + Sbjct: 509 HLQLGLHHLGQQKHDEAIAAFRTVIRYDVANITAWEGLADAYMGRGSYSSAAKVFEKTAE 568 Query: 289 VNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA-------LEM 338 + P +P++ + + L N++ ++ +++ L Sbjct: 569 LKPDNLYPKLQLANIKNILRQHRDAVALFEELLSTNEKYFPAVKGIAESYAGLCYYRLGQ 628 Query: 339 GSIDQAHAKAMLAMKIAPRK 358 + +A A A+ R Sbjct: 629 RLVGKARDHAQSAVDYVTRA 648 >gi|145596855|ref|YP_001161152.1| adenylyl cyclase class-3/4/guanylyl cyclase [Salinispora tropica CNB-440] gi|145306192|gb|ABP56774.1| adenylyl cyclase class-3/4/guanylyl cyclase [Salinispora tropica CNB-440] Length = 1190 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 18/192 (9%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNEYLVYL---LEVQIALAERQYNI 138 +G+ + G+++ A + + + L + L +AL +++ Sbjct: 976 RGFALVVRGVIARGLGEPEHAADLLADAMGYARRTSHPLLTGMAGTLRGFVALDSGDHDL 1035 Query: 139 AHEKLEMMLQIPA-------TREFAVYSLYFESCRIGDLNSAQRY---ATKALDISPDAP 188 A + +L + L GD A A +P Sbjct: 1036 AEREARAVLTAVEPHNPWAPAQVAPRVLLATARLAAGDPAVAVGLLAPVATAAQTTPALL 1095 Query: 189 WVTEAVVQQYV----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 V+ QY + +A+ + + + E R++ + A GD A Sbjct: 1096 ISRRLVMAQYASALLAHGQTEQALDWAQRARTVPAEDVRSQVLAAAVLGKALAATGDSTA 1155 Query: 245 SYHDAIESLKLC 256 + A E+++L Sbjct: 1156 ARASAQEAVRLA 1167 >gi|77460482|ref|YP_349989.1| response regulator receiver domain-containing protein [Pseudomonas fluorescens Pf0-1] gi|77384485|gb|ABA75998.1| Response regulator receiver domain protein [Pseudomonas fluorescens Pf0-1] Length = 534 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 6/133 (4%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYA 177 L Q + ++ + L F + G ++ A+ Sbjct: 165 PLCLRYRADALRDMNQNEALERLYDSIIADRPLPWAFAGLGKLLF---KRGQVSQAKGVY 221 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 KAL + P P + + + V + A L + + + R +A LL ++ N Sbjct: 222 EKALKVFPMMPALYDGMADVLVAEGDTKGAQQVLEEAIRLSPLAVRRQA-LLGKLAMANE 280 Query: 238 DKGDMIASYHDAI 250 D +Y A+ Sbjct: 281 DFDTASRAYRQAV 293 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 42/211 (19%) Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 PW + + + S+A + K L + +GD + Sbjct: 197 LPWAFAGLGKLLFKRGQVSQAKGVYEKALKVFP----MMPALYDGMADVLVAEGDTKGAQ 252 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 E+++L A + K A + + Y +++ Sbjct: 253 QVLEEAIRLSP-------LAVRRQALLGKLAMANEDFDTA---------SRAYRQAVNQG 296 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSID--QAHAKAM------LAMKIAPRK 358 + K ES + ++ + GS + K P Sbjct: 297 AQSRFK-----------DPESNLGLAHALISKGSERGLDTRTRLEINTTLSAVAKENPTD 345 Query: 359 EIFLLLAQIEQANS---HNTDKILYWTQSAL 386 + A++ +A S ++ + T+ AL Sbjct: 346 PGLQIRARLMKATSLLLNDAETAEKLTEQAL 376 >gi|71275394|ref|ZP_00651680.1| HemY, N-terminal [Xylella fastidiosa Dixon] gi|71898566|ref|ZP_00680737.1| HemY, N-terminal [Xylella fastidiosa Ann-1] gi|170730369|ref|YP_001775802.1| porphyrin biosynthesis protein [Xylella fastidiosa M12] gi|71163694|gb|EAO13410.1| HemY, N-terminal [Xylella fastidiosa Dixon] gi|71731690|gb|EAO33750.1| HemY, N-terminal [Xylella fastidiosa Ann-1] gi|167965162|gb|ACA12172.1| porphyrin biosynthesis protein [Xylella fastidiosa M12] Length = 391 Score = 43.4 bits (101), Expect = 0.077, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 125/367 (34%), Gaps = 17/367 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWI 56 + L +FF++ L I S + P DV I G Y T+ +L + Sbjct: 4 LRNLALWFFLLILGIFSAQWLLQQPNRDFGDVVIRIGGNDYITTVPQATILLLIIVLLLW 63 Query: 57 LLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTF 116 L ++ + + + Y +G+ L GL ++ LA ++ S+ Sbjct: 64 SLRSLLVLPI-------RIWKRYKYKQGHTHLIEGLRNVDHGYWQLAERLLIAASEDEDT 116 Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + +++A ++ A+ + + T + S + + + Sbjct: 117 EVSAIALTTAIRMADMRGDFDTANVLTNKLAKQDPTTHALLQSERLLALQRPNDAINVLD 176 Query: 177 ATKALDISP-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A + + P ++Q + +S T Q+ + E+ R + + Sbjct: 177 ALETHPLPPRGLLIRARTLIQIGRADEAYSYLGTLREQRLLSDPEYVRFENETIENVLRQ 236 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVNPHPE 294 D + + ++LK N + A L +N + E LE+ W N Sbjct: 237 AKDANVLTEHWEALPQALKTHPNIVGTYAIRATVLHLENAAMLSLEQTLERSWDEN---- 292 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + +Y L + + RA ++ +S L+ + ++AL+ QA A+ Sbjct: 293 LIRLYGFLPLKEYQTRQNRAEHWLTLHPDSPNLLLTLGRLALQRQQYSQAETFLRRAIDK 352 Query: 355 APRKEIF 361 E + Sbjct: 353 ETSAETW 359 >gi|332974772|gb|EGK11688.1| hypothetical protein HMPREF9374_1932 [Desmospora sp. 8437] Length = 655 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 103/314 (32%), Gaps = 62/314 (19%) Query: 84 GYKALYTGLMS----IAAH-----NIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALA 132 G A+ GL++ + + + A + + + +E + A Sbjct: 326 GIGAVVIGLVAGVYLLFSGGLWGDDAEDAARYYGESVRLFREKQMDEAITR------AQL 379 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A ++ + +L+ E D A + + + PD P V + Sbjct: 380 AVEADPAEKEY----------LLHLANLHAEKK---DYKKATQVLAEGVKNVPD-PGVYD 425 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ + + + +A + + + + +R + + KGD A+ + Sbjct: 426 ALAMYALDSGDLKQAESAVQKALSS----DRENPLFHYHEGKIHGAKGDDEAAVRSFRTA 481 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------------- 299 ++L A L+ K +A ++ K+ P+ A ++ Sbjct: 482 VRLNPKEGSYHYILASYLLKLKKTEEAVKHGQEAAKLK--PDNATVWYKLGQAHLAERER 539 Query: 300 ------------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 L+++ + ++ ++ E + +S G + + Sbjct: 540 IAKKTGLKKKERESLMADTVKEATQAFNQVIKLKPEHAATHYYLSIARYYAGDFEASLKS 599 Query: 348 AMLAMKIAPRKEIF 361 A +++I+P+ ++ Sbjct: 600 ARESVRISPKTAVY 613 >gi|332212286|ref|XP_003255250.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 1 [Nomascus leucogenys] Length = 479 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 17/144 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSHTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262 + + A+ ++ + KG + ++ +++ +A Sbjct: 283 TSVLLHHQIGLCYRAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAEVILEKI 286 + A+ I RKAE +K+ Sbjct: 343 HLDLARMYIEAGNHRKAEETFQKV 366 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 24/149 (16%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L+ D+G E+L + AAK + KA +L+K + P Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSHTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282 Query: 292 -----HPEIANIYT--------------HLLSENTVGKLKR-----ALRLEEINKESVES 327 H +I Y + + K+ R E + Sbjct: 283 TSVLLHHQIGLCYRAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++++ +E G+ +A + + P Sbjct: 343 HLDLARMYIEAGNHRKAEETFQKVLCMKP 371 >gi|301058856|ref|ZP_07199841.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300447068|gb|EFK10848.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 763 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 21/227 (9%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 R D+ +A Y GL A ++ + Q L L A + Sbjct: 555 RLRRDDR--EAFYRGL-----DEFRRAMLYNADFAAQRYN----LGNL----AANLGKDR 599 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E + + I A +L R G+ ++R +A+ P+ V ++ Sbjct: 600 E-AIEYYQKAIAIDDQFYPAKVNLAMLYNRQGNNKESERLLREAVAQHPELYEVAYSLGL 658 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 K++ A FL + ++ R + G + +L L Sbjct: 659 LLAEMKQYEDAGVFLAKAAAGMPDYGR----VHYNHGQLLLILGQPKKAQVALETALALE 714 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHL 302 + + A + + +A + E + P H + H+ Sbjct: 715 PQNQEFFVALADCYLRSRQPDRARSLAEDTIRRFPGHRAANELLRHI 761 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 57/168 (33%), Gaps = 18/168 (10%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + ++ R L + + G + +++ + D A + A Sbjct: 568 LDEFRRAMLYNADFAAQRYNLGNLAA----NLGKDREAIEYYQKAIAIDDQFYPAKVNLA 623 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLS-ENTVGKLKRALRLEE 319 Q +++E +L + V HPE + + + E+ L +A Sbjct: 624 MLYNRQGNNKESERLLREA--VAQHPELYEVAYSLGLLLAEMKQYEDAGVFLAKA---AA 678 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQ 366 + ++ L +G +A A+ + P+ +E F+ LA Sbjct: 679 GMPDYGRVHYNHGQLLLILGQPKKAQVALETALALEPQNQEFFVALAD 726 >gi|149631897|ref|XP_001506546.1| PREDICTED: similar to KIAA0155 isoform 1 [Ornithorhynchus anatinus] Length = 1163 Score = 43.4 bits (101), Expect = 0.078, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 104/306 (33%), Gaps = 43/306 (14%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517 Query: 141 EKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + + + P + + L + G+ A + +AL I+ D P + ++ Sbjct: 518 KLYKNILREHPNYVDCYLR-LGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHL 576 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHD 248 +EW + K N ++L + R E +K + Sbjct: 577 AKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAI 635 Query: 249 AIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANI 298 + L+ N A ++ A K + + R+A + +W +A+I Sbjct: 636 YKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHI 690 Query: 299 YTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 Y + ++ + + ++ E ++ +++ + G + + + A +AP Sbjct: 691 YVEQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAP 748 Query: 357 RKEIFL 362 + + Sbjct: 749 SDTVLM 754 >gi|325926223|ref|ZP_08187581.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118] gi|325543405|gb|EGD14830.1| putative xylanase/chitin deacetylase [Xanthomonas perforans 91-118] Length = 883 Score = 43.4 bits (101), Expect = 0.079, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 6/107 (5%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 AK +R RA L R L+ + + E+LKL + +A+ Q + Sbjct: 760 AAKSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQGRF 819 Query: 277 RKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLE 318 ++ LE K++P +A + Y + + A LE Sbjct: 820 AESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKARKAYATYLE 865 >gi|316970705|gb|EFV54592.1| putative tetratricopeptide protein [Trichinella spiralis] Length = 692 Score = 43.4 bits (101), Expect = 0.079, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 76/246 (30%), Gaps = 60/246 (24%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA- 187 ++++ +A + LE L++ + L E + D + A Y +AL + P Sbjct: 454 ACSLKKRHELAIQCLERALELDKHYFYGHILLGHEWSALDDTDQADHYFKEALRLRPRHH 513 Query: 188 -PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 PW + V + A LL + SL + S Sbjct: 514 SPWFSLGYVAFRSQ-------------------DMENAEAYLLRSLSLNPKSPSIQLISL 554 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 +E+ + +KR A IL K+ P N Sbjct: 555 LKVLEA--------------------RGRKRMAGQILNYTLKIAP-------------NN 581 Query: 307 TVGKLKRALR------LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 T + RA+ L+ I ++ ++ EM A A+ + P E Sbjct: 582 TFCRFTRAMAQKELMDLKRIIPSEPIVYFLLGRVYKEMNEPHSAMVNFAHAVTLDPNLEQ 641 Query: 361 FLLLAQ 366 ++AQ Sbjct: 642 LQVMAQ 647 >gi|315123310|ref|YP_004065316.1| putative protein-tyrosine sulfotransferase [Pseudoalteromonas sp. SM9913] gi|315017070|gb|ADT70407.1| putative protein-tyrosine sulfotransferase [Pseudoalteromonas sp. SM9913] Length = 480 Score = 43.4 bits (101), Expect = 0.079, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 6/157 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L + L++ + A +M+LQ A++ L + R+ ++A +A Sbjct: 2 LLKKADQLLSQNKLREAEFHYKMLLQAEPDNGDALFGLGKVALRLEQFDAAVYILQRACQ 61 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P A A+ + A L A + + G++ Sbjct: 62 HLPYALEPLYALSDAFNAVNSPEDAQKVLEYATSIAADNPD----THYYLAQHYLTFGEL 117 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ E+LKL + L+ + KA Sbjct: 118 DKAHATFEEALKL--GIAPVTAYVLFELVQLGRFNKA 152 >gi|297692556|ref|XP_002823611.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like [Pongo abelii] Length = 914 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 688 EIWMKKAIKLQAD 700 >gi|260829076|ref|XP_002609488.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae] gi|229294845|gb|EEN65498.1| hypothetical protein BRAFLDRAFT_95582 [Branchiostoma floridae] Length = 816 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 14/204 (6%) Query: 196 QQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + AI L ++ + ++ SL + + +SL Sbjct: 598 RLQHDQGRYVEAIETYLEAIRRRPSHYAPQSLYNMLGESL--FKNSQLAEAEEWFKKSLA 655 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTH-LLSENTV 308 + + A + AK + N+ +AE++ +K + H SE Sbjct: 656 AKPDHVPAHLTYAKLMAKTNRAAEAELMYQKAMELDSNSATVHQHYGQYMAETGRSEEAA 715 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 + +A E+ E++ + + G + A A ++ P + L I Sbjct: 716 DMMVKA---VELGSPEFETIFNAANALRQAGRHEDAEKYYKQATQLKPEVASAHMNLGAI 772 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 N + + AL PD Sbjct: 773 LHLNGKYVEAETSYL-RALELKPD 795 >gi|220908955|ref|YP_002484266.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219865566|gb|ACL45905.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 463 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 46/174 (26%), Gaps = 16/174 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIAL--AERQYNIAHEKLEM-----MLQIP 150 N LA + L L L Q L + A + + + Sbjct: 282 NYQLAEDYYHQAEVAVEGRTAPLTSLILAGQARLQNLQGDRARAEQYWQQAEILLQASLS 341 Query: 151 ATREFAVYSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 ++ L G D A + + DA + + EWS A Sbjct: 342 GSKFGHRRELAQLLLERGHPADQRQAVALMQAEVQLRQDAQTLGTLALAL-SRVGEWSAA 400 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + + ++ A+LL + G + + ++ ++ Sbjct: 401 RQAIQKALRSGI----QDAVLLHRAGVIATALGHPVEAEQYFHQARRIDPTFDP 450 >gi|194380400|dbj|BAG63967.1| unnamed protein product [Homo sapiens] Length = 914 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 688 EIWMKKAIKLQAD 700 >gi|158337862|ref|YP_001519038.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158308103|gb|ABW29720.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 643 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 74/228 (32%), Gaps = 18/228 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE-------------KL 143 A N + + + + ++ L Q A + Sbjct: 412 AGNGQVEEALTVLRPVVQDSPENPFIRMTLGKVLLQAGQKQEARQLLQTGLKKVSFPLAF 471 Query: 144 EMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + P + V LYFE + + A + KA+ I PD AV Sbjct: 472 VGIETTPNAKLETVLGQLYFELKQ---YDLALAHYQKAVQIDPDFAVGHFAVGNILRRQG 528 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + +AI + K R L +G A+ D + +L ++ A Sbjct: 529 KSDQAIPAYEKALKLQPRNLFFTHQFYSGRGLALLAQGKEAAAIADFERATQLNAINVEA 588 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVG 309 K+L+ QNK A LE + +NP +P++A S+ +V Sbjct: 589 LHGLGKALLQQNKPSAAIPHLEAAYDLNPGYPQVAEDLRLAKSQTSVE 636 >gi|158261895|dbj|BAF83125.1| unnamed protein product [Homo sapiens] Length = 899 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 688 EIWMKKAIKLQAD 700 >gi|114646136|ref|XP_522486.2| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Pan troglodytes] Length = 914 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 688 EIWMKKAIKLQAD 700 >gi|22760766|dbj|BAC11325.1| unnamed protein product [Homo sapiens] Length = 815 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 452 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 511 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 512 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 570 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 571 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 627 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 628 EIWMKKAIKLQAD 640 >gi|473901|gb|AAA25160.1| ORF1 [Lactococcus lactis] Length = 349 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 20/188 (10%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP---ATREFAVYSLYFES 164 S + + + L+ + + Y+ A + + + T+ S+Y Sbjct: 52 SKLEEARELSDSPLITFALAESYFEQGDYSAAITEYAKLSERKILHETK----ISIY--- 104 Query: 165 CRIGDLNSAQRYATKA---LDISPDAPWVTEAVVQ---QYVLAKEWSRAITFLNQKKKNA 218 RIGD + A L+ S + E + + Y +RAI + +K Sbjct: 105 QRIGDSYAQLGNFENAISFLEKSLEFDEKPETLYKIALLYGETHNETRAIANFKRLEKMD 164 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E+ +A + + A+ A + +K N++ A+K K Sbjct: 165 VEFLNYE----LAYAQTLEANQEFKAALEMAKKGMKKNPNAVPLLHFASKICFKLKDKAA 220 Query: 279 AEVILEKI 286 AE L Sbjct: 221 AERYLVDA 228 >gi|51476220|emb|CAH18100.1| hypothetical protein [Homo sapiens] Length = 914 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 688 EIWMKKAIKLQAD 700 >gi|224809432|ref|NP_861448.2| transmembrane and TPR repeat-containing protein 3 [Homo sapiens] gi|46798873|emb|CAG26973.1| SMILE protein [Homo sapiens] gi|109658812|gb|AAI17178.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo sapiens] gi|109658968|gb|AAI17176.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo sapiens] gi|119617821|gb|EAW97415.1| transmembrane and tetratricopeptide repeat containing 3 [Homo sapiens] gi|313883880|gb|ADR83426.1| transmembrane and tetratricopeptide repeat containing 3 [synthetic construct] Length = 914 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 630 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 631 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 687 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 688 EIWMKKAIKLQAD 700 >gi|326680234|ref|XP_001922486.3| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR repeat-containing protein 3 [Danio rerio] Length = 934 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 85/234 (36%), Gaps = 15/234 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--T 191 + + A + L++ T Y+L + + D + A R +ALD++P Sbjct: 579 NKPSEAKDAYLRALELDHTNADLWYNLAIVNIEMKDPSEALRNFNRALDLNPRHKLALFN 638 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A++ Q ++ N++ + + A + D + + H E Sbjct: 639 SALLMQESGE---AKLRPEANRRFLTYVKEEPDDANGYFNLGMLAMDANENEEAEHWMRE 695 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE------ 305 ++ L A A ++ A +LE++ + HPE L + Sbjct: 696 AIHLQPGFRSALFNLALLYSQSQRELDALPVLEELLRY--HPEHVKG-LILKGDILMNHR 752 Query: 306 -NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +T G R+ ++ +V++ + + E + +A + + +AP++ Sbjct: 753 KDTRGAKTCFERILSMDPSNVQAKHNLCVVYFEERELQRAERCLVDTLAMAPQE 806 >gi|299131799|ref|ZP_07024994.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] gi|298591936|gb|EFI52136.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2] Length = 624 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 19/200 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+GDL+ A +A+ ++P + + A+T + + Sbjct: 100 RLGDLDGAADAYRRAIALNPGFAAAFHDYGNVLLGQGKPDEALTCYTRAIGIDPFY---- 155 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A R+ + E+L + +++ A + L + + +A +E+ Sbjct: 156 ASAHHQRAKVLQTFERHAEALAAFNEALAIKPDNVEALCRRSTVLFALKRFDEALASVEQ 215 Query: 286 IWKVNPHPEIANIYTHLLS--ENTVGKLKRA-LRLE------EINKESVESLVIVSKIAL 336 +V+P Y + +T+ +L R L ++ E E L+ S Sbjct: 216 AKRVDP------TYVEAFNICGSTLHRLDRFDEALASFAHALSLDSERPEVLLNRSATFD 269 Query: 337 EMGSIDQAHAKAMLAMKIAP 356 E+ ++A A+ I P Sbjct: 270 ELHRFEEAALDLDAALTINP 289 >gi|584834|sp|P37718|ACSC_ACEXY RecName: Full=Cellulose synthase operon protein C; Flags: Precursor gi|580743|emb|CAA38489.1| acsC [Gluconacetobacter xylinus] gi|1090660|prf||2019362C acsC gene Length = 1302 Score = 43.4 bits (101), Expect = 0.080, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 24/288 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154 A + + + ++ + + + ++ + E Q + A+ L + ++ Sbjct: 433 TGQTGEAERNYRAILARN--GDNPIALMGLARVLMGEGQESEANALLSRLGGRYSDQVQQ 490 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 V + E+ R D +A+ +PD PW+ + + + A + Sbjct: 491 IEVSGIMAEAARTSDSAQKVSLLRQAMTKAPDDPWLRINLANALQQQGDSAEAANVMRPL 550 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLIS 272 + + +A +L A + D +A A L + +I A + I Sbjct: 551 LTSPRTPADYQAAILYASG----NGNDTLARRLLA----GLSPDDYSPAIRTIADEMAIK 602 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + + ++ NP P + + T + L + + + + + Sbjct: 603 ADLASRLSMV------SNPTPLVREALAA--PDPTGARGVAVADLFRQRGDMLHAHMALR 654 Query: 333 KIALEMGSIDQAH--AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + A A MKI+ LLA + + T Sbjct: 655 IASTRNIDLTTEQRLAYATEYMKISNPVAAARLLAPLGDGSGTATGSA 702 >gi|319787163|ref|YP_004146638.1| transglutaminase [Pseudoxanthomonas suwonensis 11-1] gi|317465675|gb|ADV27407.1| transglutaminase domain-containing protein [Pseudoxanthomonas suwonensis 11-1] Length = 379 Score = 43.4 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 9/184 (4%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +++ + + +R A R E +GD+ + +L+ D + A Sbjct: 167 LVSRSRPRGVDDDRALAHFHNNRGAELMAEGDLGGALASLEAALEEDDRFVPAWNNLGVL 226 Query: 270 LISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGKLKRALRLEEINKES 324 L + A LE +++P H + +Y + E+ + + AL+L++I Sbjct: 227 LQRLDDTGGARRALETGHRLDPDHASTLTNLVALYRRI-GEDALAR-NHALKLDQIQAND 284 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLAQIEQANSHNTDKILYWTQ 383 +++ G A + +A++I + F LA+ + + Sbjct: 285 PFHQFMLAMECENRGDYACAISHYRVAIRIQEGEHQFHFGLARAYFLDGQPGNAQRE-LG 343 Query: 384 SALH 387 AL Sbjct: 344 RALT 347 >gi|298244040|ref|ZP_06967847.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297557094|gb|EFH90958.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 515 Score = 43.4 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 72/248 (29%), Gaps = 13/248 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIG 168 + Y + ++ Y A L + T L + Sbjct: 204 RALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPTLATVYYNRGLTLAAL--N 261 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + A + AL+++PD V Y ++ A+ + + +E + Sbjct: 262 EHTRALQDFQHALELNPDLDIVYADRAASYAALGMYNEALQDFQRSITHDEE----NVLA 317 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + R + + D L N A A++ + +A V + W+ Sbjct: 318 IFQRGTTYLRLNEAHKALQDFNYVLAHEPNLARAYAQRAEAHLRLGNLVQARVDYRQSWE 377 Query: 289 ---VNPHPEIANIYTHLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + P + + ++ G + + + N + + + L ++ Sbjct: 378 LDSTHIEPAWMGAWLDMCLDDYPGAISPETLEEIASRNPADYHACLCRAVAHLLREQPER 437 Query: 344 AHAKAMLA 351 A ++ A Sbjct: 438 ALSELAGA 445 >gi|302383515|ref|YP_003819338.1| hypothetical protein Bresu_2406 [Brevundimonas subvibrioides ATCC 15264] gi|302194143|gb|ADL01715.1| TPR repeat-containing protein [Brevundimonas subvibrioides ATCC 15264] Length = 602 Score = 43.4 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 22/231 (9%) Query: 68 CPAMLFHMLHK--------RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 PA + + H + K L + +I + A + +S + Sbjct: 33 SPAAIRRLSHALAGKGPSAKAQRKAIDTLKAAVAAIRVGDYATATR--RCLSVLQADEHN 90 Query: 120 YLVYLLEVQIALAERQYNIAHEKLE----MMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 L + + E + A + ++ + PA + L + R+G L+ A++ Sbjct: 91 GLAWHVLAISREKEGHLSDALNAYDSALCLLPEDPAIA----HDLARLAQRLGHLDIAEK 146 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 K L + P T + K ++ A+ L + ++ L S Sbjct: 147 LLLKFLAVEPGHVEGTNNLACVLRDQKRYTEAVDRLRDLIQIEQDSPTLWNTLGTVLS-- 204 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 D+G M S E+L+L A A L + +A L++ Sbjct: 205 --DQGQMKESLTFFDEALRLDPAFAKARYNRANVLQPLGQPDRALADLDEA 253 >gi|169827526|ref|YP_001697684.1| hypothetical protein Bsph_1967 [Lysinibacillus sphaericus C3-41] gi|168992014|gb|ACA39554.1| Hypothetical ypiA protein [Lysinibacillus sphaericus C3-41] Length = 422 Score = 43.4 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 69/205 (33%), Gaps = 8/205 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +GD + A + + SP+ P + Y + + A +N+ + Sbjct: 80 MELGDEDEALNLLLEIEEGSPEYPQALLVLADYYQMQGLFEVAEKRINEALAILPD---- 135 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVI 282 +L A++ + G + + E + + + A+ + A Sbjct: 136 EPLLHFAKAELLFETGRFLEAARLYEELNEQQEEFAGIHLVERLAEVYRAGAAYETALDY 195 Query: 283 LEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K + P+I Y+ S+ +K+ L+E++ + + +++++ Sbjct: 196 YLKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAYLLLAESYAMTEE 255 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLA 365 +A+ +K + L A Sbjct: 256 NQKAYTAIQEGLKRDEYDKTLYLFA 280 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 98/285 (34%), Gaps = 27/285 (9%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC--RIG 168 +E L++ + ++ ++ A E + + ++ + + R G Sbjct: 128 EALAILPDEPLLHFAKAELLFETGRFLEAARLYEELNEQQE-EFAGIHLVERLAEVYRAG 186 Query: 169 -DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 +A Y KAL+ + A + ++++ AI L + K+ ++ + Sbjct: 187 AAYETALDYYLKALEDEVKPDILFGAAYSAF-QSQKYEMAIKQLEELKELDPDYFSAYLL 245 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L + ++ ++ +Y E LK + + A K + + +AE L + Sbjct: 246 LAESYAMTEENQ----KAYTAIQEGLKRDEYDKTLYLFAGKMALKNSLPVEAEQYLREAI 301 Query: 288 KVNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI---VSKIALEMGSI 341 ++P +A I E ++ L++ E + ++ + Sbjct: 302 ALDPEYMEAVLALISVLGQQERNEDVIELFETLQQ---NDFEWSTLYPFAAEAYENLELY 358 Query: 342 DQAHAKAMLA---MKIAPR---KEIFLLLAQIEQANSHNTDKILY 380 D+A+ LA K K ++ LL E+ +L Sbjct: 359 DRAYEFYRLAYNDFKEDATFLEKYVYFLL---EEGKRSEAKVVLE 400 >gi|150010168|ref|YP_001304911.1| TPR domain-containing protein [Parabacteroides distasonis ATCC 8503] gi|149938592|gb|ABR45289.1| TPR-domain containing protein [Parabacteroides distasonis ATCC 8503] Length = 999 Score = 43.4 bits (101), Expect = 0.081, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 70/207 (33%), Gaps = 23/207 (11%) Query: 93 MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147 ++ A ++ A+++ S V S F E + +I ++ Y A E + + Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA-----PWVTEAVVQQYVLAK 202 + P +E A L + G A A L P + Y+ K Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEAL-LAANNLLKEPKLSPEIMSEARYVRAKAYISLK 890 Query: 203 EWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LC 256 + ++A+ L + K+ + + A LL +N D + + IE+ L Sbjct: 891 QENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLA 950 Query: 257 DNSIMASICAAKSLISQNKKRKAEVIL 283 I A I Q +A L Sbjct: 951 RGFI----LLADIYIRQGDDFQARQYL 973 >gi|284041501|ref|YP_003391841.1| glycosyl transferase family 2 [Conexibacter woesei DSM 14684] gi|283945722|gb|ADB48466.1| glycosyl transferase family 2 [Conexibacter woesei DSM 14684] Length = 797 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 69/229 (30%), Gaps = 20/229 (8%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAITFLNQKKKNAKEWNR 223 GD A+ A +AL+ P T+ V +Q A AI + + +R Sbjct: 419 RGDDAIAR--AEEALERFPGF---TDLVFEQAAAAQALGRTDDAIAYFERCIAMGDAPSR 473 Query: 224 NRAIL-------LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A + IA + GD A+ +L + A +L+ + Sbjct: 474 YTATVGMGTYLPTIALAEIRHQHGDPAAAVELLDGALAAHPGFFGLVLPFAAALLDDGAE 533 Query: 277 RKA--EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + E + K+ P T ++ L S + V +++ Sbjct: 534 PDVVVARVEELVAKLTPTVRFMLGTALYEHGETEAAEQQYRELLAQQPSSGHARVALAEA 593 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFL---LLAQIEQANSHNTDKILY 380 L D+A A A P L A+I + +L Sbjct: 594 LLSQRRWDEAAAVAAELNDAEPHAGAARRSELFARITGGDHTGAAAVLA 642 >gi|194226638|ref|XP_001915085.1| PREDICTED: similar to SMILE protein [Equus caballus] Length = 915 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPTEALKNFNRALELNPKHK 631 Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 S +++ + E+ +A + + + P + L + + +++ Sbjct: 632 LALFNSAILMQESG-EVKLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 689 Query: 381 WTQSALHAMPD 391 W + A+ D Sbjct: 690 WMKKAIKLQAD 700 >gi|332221054|ref|XP_003259672.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Nomascus leucogenys] Length = 914 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 68/194 (35%), Gaps = 14/194 (7%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + KK A+ + + + +L A++ + + +++ + + A I Sbjct: 511 RQIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRG 570 Query: 268 KSLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES 324 + L+ NK KA E L+ + + ++ H+ + L+ R E+N + Sbjct: 571 ELLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALRNFNRALELNPKH 630 Query: 325 VESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDK 377 + + A+ M +A + + + P + L + + + + Sbjct: 631 ---KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE- 686 Query: 378 ILYWTQSALHAMPD 391 W + A+ D Sbjct: 687 AEIWMKKAIKLQAD 700 >gi|329119499|ref|ZP_08248184.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC BAA-1200] gi|327464432|gb|EGF10732.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC BAA-1200] Length = 390 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 22/191 (11%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY- 158 AR++ Q Y + L ++ + + + A L+ + P T Sbjct: 58 GKAARELAEAADTQ---PQSYELNLTLAKLYRSRGENDKAARLLQKLADSPDT--VGGRK 112 Query: 159 -------SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 L ++S + D + + + + E ++ Y ++W +A+ Sbjct: 113 EAVLFELGLTYQSAGLVDRAEQIFLSLENGNTAKG---ARERLLNIYQQDRDWEKAVAAA 169 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAK 268 + + + A + K D A+ A+++ C ASI Sbjct: 170 QALSHDEQTYRFETAQFYCEMAQAALFKSDYAAARERVASALDANGKCSR---ASIILGD 226 Query: 269 SLISQNKKRKA 279 + A Sbjct: 227 IEQKEGNYAAA 237 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 68/240 (28%), Gaps = 50/240 (20%) Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W A+ A W A + K AK +LE + + + Sbjct: 9 WPLLALTPFICFALGWFAARVDMKTVLKQAKILP-----AAFYCALEALVDRNSGKAARE 63 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK---------------------IW 287 E+ S ++ AK S+ + KA +L+K + Sbjct: 64 LAEAADTQPQSYELNLTLAKLYRSRGENDKAARLLQKLADSPDTVGGRKEAVLFELGLTY 123 Query: 288 KVNPHPEIAN-IYTHLLSENTV----GKL--------------KRALRLEE----INKES 324 + + A I+ L + NT +L A L E+ Sbjct: 124 QSAGLVDRAEQIFLSLENGNTAKGARERLLNIYQQDRDWEKAVAAAQALSHDEQTYRFET 183 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKILYWTQ 383 + +++ AL A + A+ ++L IEQ + I +T Sbjct: 184 AQFYCEMAQAALFKSDYAAARERVASALDANGKCSRASIILGDIEQKEGNYAAAIEAYTA 243 >gi|254447290|ref|ZP_05060757.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium HTCC5015] gi|198263429|gb|EDY87707.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium HTCC5015] Length = 378 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 53/185 (28%), Gaps = 37/185 (20%) Query: 98 HNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 I A ++H + + T + L L Q LA + A Sbjct: 83 GEIEKAIRVHQNLIARPTLSPSDRSLALLELGQDYLAAGVLDRAE--------------- 127 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQK 214 L+ + G+ + ++ YV +EWS AI Sbjct: 128 ---GLFQQVSVSGNRQV----------------EAMKGLLNIYVQEQEWSTAIDIASELN 168 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + +++ A ++ E + + + + ++ S+ + A+ Sbjct: 169 RLTKDDYSHQVAHFYCEQAREAINNQQLEKARQWLQRAQQVDGFSLRVNYMRAQLEQELG 228 Query: 275 KKRKA 279 +A Sbjct: 229 HYSQA 233 >gi|34392434|dbj|BAC82544.1| cellulose synthase subunit C [Gluconacetobacter hansenii ATCC 23769] Length = 1302 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 91/288 (31%), Gaps = 24/288 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154 A + + + ++ + + + ++ + E Q N A+ L + ++ Sbjct: 433 TGQTGEAERNYRAILARN--GDNPIALMGLARVLMGEGQENEANALLSRLGGRYSDQVQQ 490 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 V + E+ R D +A+ +PD PW+ + + + A + Sbjct: 491 IEVSGIMAEAARTSDSAQKVSLLRQAMTKAPDDPWLRINLANALQQQGDSAEAANVMRPL 550 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLIS 272 + + +A +L A + D +A A L + +I A + I Sbjct: 551 LTSPRTPADYQAAILYASG----NGNDTLARRLLA----GLSPDDYSPAIRTIADEMAIK 602 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + + ++ NP P + + T + L + + + + + Sbjct: 603 ADLASRLSMV------SNPTPLVREALAA--PDPTGARGVAVADLFRQRGDMLHAHMALR 654 Query: 333 KIALEMGSIDQAH--AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + A A MKI+ LLA + + T Sbjct: 655 IASTRNIDLTTEQRLAYATEYMKISNPVAAARLLAPLGDGSGTATGSA 702 >gi|134106567|ref|XP_778294.1| hypothetical protein CNBA2940 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260997|gb|EAL23647.1| hypothetical protein CNBA2940 [Cryptococcus neoformans var. neoformans B-3501A] Length = 773 Score = 43.4 bits (101), Expect = 0.082, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 8/234 (3%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y +A + Q R ++ L + DL + + + IS +P AV Sbjct: 498 NYAMARRAFTFLQQQEPYRIQSMEQLSTLLWHLTDLPALSHLSQSLISISRSSPQAWIAV 557 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + L K+ A+ + + + A E + + + +++ Sbjct: 558 GNCFSLQKDHDEAMRCFRRATQ----VDEGCAYAWTLCGYEAVEMEEYERAMAFYRTAIR 613 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKL 311 A + ++ R AE + ++NP + + S++ V L Sbjct: 614 TDARHYNAWYGMGLVYLKTDRPRYAEHHFRRAVEINPTNPVLLCCVGMALEKSDDVVQAL 673 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLL 364 R + S + + + D+A + + AP + +F LL Sbjct: 674 HFYERASKYAPTSAMVQFKRIRALVALQRYDEAISALVPLTHSAPDEANVFFLL 727 >gi|331662694|ref|ZP_08363617.1| putative heat shock protein [Escherichia coli TA143] gi|331061116|gb|EGI33080.1| putative heat shock protein [Escherichia coli TA143] Length = 273 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 15/163 (9%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R A+ L + G + A+ I Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIG 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++Q Y EW +AI + K K+ R A +L++ D+ Sbjct: 143 -----ALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLD 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + NS SI + +++ + KA L+++ Sbjct: 198 RAMALLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRV 240 >gi|307543978|ref|YP_003896457.1| type IV pilus assembly protein PilF [Halomonas elongata DSM 2581] gi|307216002|emb|CBV41272.1| K02656 type IV pilus assembly protein PilF [Halomonas elongata DSM 2581] Length = 240 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 11/187 (5%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y+ + SRA L+ K A + A A ++ + +GD + + +L+ Sbjct: 51 AYLARDDLSRASEALDHALKLAPD----DAEARQAMAMVHHRRGDDALAEENFRAALRDA 106 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI------YTHLLSENTVGK 310 + A A L Q + R+A L++ + + A + + Sbjct: 107 PDLTRARNNYAAFLYDQGRIREACQQLQRASEDTHYTNRAQLLVNLGRCQRATGNEAAAR 166 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 R I+ S + ++++ + G + A + A + + LA++ Sbjct: 167 -ASFERALRIDPGRPGSHLHLAELDVAQGRLASAERHLERYRRQAGQDALSARLAEVIAR 225 Query: 371 NSHNTDK 377 + D+ Sbjct: 226 ARDDHDR 232 >gi|300312980|ref|YP_003777072.1| N-acetylglucosaminyl transferase [Herbaspirillum seropedicae SmR1] gi|300075765|gb|ADJ65164.1| N-acetylglucosaminyl transferase protein [Herbaspirillum seropedicae SmR1] Length = 391 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 10/164 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +L P A+Y L + + G L+ A+ + +D A Sbjct: 84 GETERAIRVHQNLLARPDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQYSAQ- 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248 A+++ Y KEW RAI+ + R A + + + + A+ Sbjct: 143 AGRALLEIYQREKEWERAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTEAAMAL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++L S+ A++ +L +Q A + W+ H Sbjct: 203 LEKALAADRKSVRATMLMGDALRAQGDIEGAL----ETWRRVEH 242 >gi|294674663|ref|YP_003575279.1| hypothetical protein PRU_2004 [Prevotella ruminicola 23] gi|294471998|gb|ADE81387.1| tetratricopeptide repeat protein [Prevotella ruminicola 23] Length = 681 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 35/212 (16%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + E+ + A Y K + +P + + ++E+ RA+T ++ K Sbjct: 31 LRG--HEAIQEQKYEDALDYFNKDVQENPKNGYSFVWIASLRTRSEEYGRALTAVDLAIK 88 Query: 217 NAKEWNRNRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + R GD I + D E+++L N A+ Q Sbjct: 89 YLPKKDVDYTSFAHTTRGDIYLHLGDTIKALSDYTEAIRLKPNETKPYEDRAQVYYEQGD 148 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 Y ++ ++ E+ V + + + A Sbjct: 149 -----------------------YARSDAD--------YRKMIELKPGDVMGYMGIGRNA 177 Query: 336 LEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQ 366 A + +K+ ++ A+ Sbjct: 178 NAQEQWVNAIKQFDYVVKLDNNYSSVYSFRAE 209 >gi|294624686|ref|ZP_06703355.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601017|gb|EFF45085.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 837 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 3/122 (2%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L + G +A + KA+DI P V+ + ++ A L ++ Sbjct: 418 YALGQQRYSEGKYVAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKNATETLRVAEQF 477 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A+ + + ++ D + I+ +L + A AA L N+ Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADSWIQMAELYPDYAPAQANAAMDLFVANRFA 534 Query: 278 KA 279 A Sbjct: 535 DA 536 >gi|108761759|ref|YP_630235.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108465639|gb|ABF90824.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 240 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 15/178 (8%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQ 174 +E L LL + ++QY A + L +++ T F + + + G AQ Sbjct: 2 DEPLKQLLTLGRGYFEKKQYAQAEQYLAKIVEQNPTFADVFNMLGIIYH--DQGQFARAQ 59 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ---KKKNAKE-----WNRNRA 226 R AL ++P + Y +++ A ++K+ + + A Sbjct: 60 RAFESALKLNPAYTEAALNLAVIYNDMGKYAEAKEVYQAALSQQKSGPDELDPYVEKKIA 119 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + A G + + +L LC + + +L A ++E Sbjct: 120 NMYGEIGDVFASSGVWAKAIEEYRRALALCPQFVDIRLKLGNALRDAGD--NAAALIE 175 >gi|58258631|ref|XP_566728.1| ubiquitin-protein ligase [Cryptococcus neoformans var. neoformans JEC21] gi|57222865|gb|AAW40909.1| ubiquitin-protein ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 773 Score = 43.4 bits (101), Expect = 0.083, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 8/234 (3%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y +A + Q R ++ L + DL + + + IS +P AV Sbjct: 498 NYAMARRAFTFLQQQEPYRIQSMEQLSTLLWHLTDLPALSHLSQSLISISRSSPQAWIAV 557 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + L K+ A+ + + + A E + + + +++ Sbjct: 558 GNCFSLQKDHDEAMRCFRRATQ----VDEGCAYAWTLCGYEAVEMEEYERAMAFYRTAIR 613 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKL 311 A + ++ R AE + ++NP + + S++ V L Sbjct: 614 TDARHYNAWYGMGLVYLKTDRPRYAEHHFRRAVEINPTNPVLLCCVGMALEKSDDVVQAL 673 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLL 364 R + S + + + D+A + + AP + +F LL Sbjct: 674 HFYERASKYAPTSAMVQFKRIRALVALQRYDEAISALVPLTHSAPDEANVFFLL 727 >gi|302878301|ref|YP_003846865.1| Methyltransferase type 11 [Gallionella capsiferriformans ES-2] gi|302581090|gb|ADL55101.1| Methyltransferase type 11 [Gallionella capsiferriformans ES-2] Length = 949 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 66/233 (28%), Gaps = 11/233 (4%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A + M + L + G + A A A +SP+ Sbjct: 159 SLFSSGNFTEAENRARSMTEHYPAHWVGWKMLGVIFQQQGKNSEALMPALTASKLSPNDA 218 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + A + + + + L G M + Sbjct: 219 ETHNNLGIILDSLGRPTEACVSYRKALTLNPNYIQAHSNL----GATLQKSGHMKEAATS 274 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----L 303 ++L L A L + + A ++ ++ P+ A + +L Sbjct: 275 YQKALALNPGYAKAHNNLGAVLSEMGEFQLAAASFKRA--LHIQPDNAQAHYNLSIVQKK 332 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + +IN + ++ + I ++ + +A A A++ P Sbjct: 333 MGAASDAIDSCRAALQINPDDADAHYNMGTILFDLNHLSEAEAAFRQALRCQP 385 >gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon] gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured archaeon] Length = 739 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 21/200 (10%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN- 224 ++G A KA++I P + AI ++ + ++ R Sbjct: 341 KLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAW 400 Query: 225 --RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + L + + IA+Y AIE A +L + +A Sbjct: 401 NNKGVALC----DLGRNEEAIAAYDKAIEIN---PQFAGAWNNKGAALGKLGRYEEAIAA 453 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI------AL 336 +K ++N P+ A + + +GKL R +++E+ ++ AL Sbjct: 454 CDKAIEIN--PQFAEAWNN--KGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLAL 509 Query: 337 E-MGSIDQAHAKAMLAMKIA 355 +G ++A A A++I Sbjct: 510 SGLGKYEEAIAAHDKAIEIN 529 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 11/137 (8%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+ L G A +A++I+P ++ AI + Sbjct: 609 VALRGL-------GRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNA 661 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + ++ A + + +D G + ++++ A L Sbjct: 662 IEINPQY----ADAWTNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSG 717 Query: 275 KKRKAEVILEKIWKVNP 291 + +A+ EK +++P Sbjct: 718 RYEEAKEAFEKAHEIDP 734 >gi|239906032|ref|YP_002952771.1| hypothetical protein DMR_13940 [Desulfovibrio magneticus RS-1] gi|239795896|dbj|BAH74885.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 1074 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 27/219 (12%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G++ +A A +A ++ P + + A L K + + Sbjct: 507 RDKWEAGEVEAALGLAGRAQELDPGHGEA-------KAARERYVAARDRLIAALKQSAAY 559 Query: 222 NRNRAILLIARSLENADKGDM----IASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A++L++A +A AI + K S+ + A+ + Sbjct: 560 LAAKRFDSAAKALDDARAVSPKFKAVAEMEAAIAARKQRAWSLDERLARARDQWNAGDAD 619 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 A + + ++P ++ L L N E ++ AL Sbjct: 620 AALATVSEAAALDP------------EHQGAAHARKNLALARDNLAKAEER---AETALG 664 Query: 338 MGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNT 375 G +D+A + A KI PR I L + + Sbjct: 665 KGKLDEARSALADAAKINPRHPRIAELQTSVAHRAGRDQ 703 >gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406] Length = 515 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 75/261 (28%), Gaps = 33/261 (12%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A++K + A Y + +GD +A KA+DI P Sbjct: 179 GNFIGAYDKFKAAAVADPNGYEAYYYMGLCKMELGDYPAAITNFDKAIDIKPKYTAAFSK 238 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEW-----NRNRAILLIAR------------SLE- 235 AI K + NR + L++R +L+ Sbjct: 239 RGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQP 298 Query: 236 ------------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ G + + D +++ L N A S + A Sbjct: 299 DNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDF 358 Query: 284 EKIWKVNP--HPE-IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K +++P HP Y + G +K + + + E+ + MG Sbjct: 359 NKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKPQYEEAYFQKANTLYMMGD 418 Query: 341 IDQAHAKAMLAMKIAPRKEIF 361 A + +K P + Sbjct: 419 KTAAIKEYDEIVKKFPNESAA 439 >gi|323698517|ref|ZP_08110429.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio sp. ND132] gi|323458449|gb|EGB14314.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio desulfuricans ND132] Length = 208 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 D A+R A+ SP + + + + + + Sbjct: 36 LSRRDFLEAEREFLDAVAHSPRMAEAYVQLGGIALQRGD-------MESCLSYNVQATQQ 88 Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R A+ +GD ++ ++LKL + A + LI+ N +A+ Sbjct: 89 RPFFAVPWGNIGFVYMQQGDNDKAHKSLKKALKLDPDFAQAQATMSSVLIAMNDFEEADK 148 Query: 282 ILEKIWKVNPH 292 +L+ + + + H Sbjct: 149 LLKTLLEKHAH 159 >gi|302343164|ref|YP_003807693.1| hypothetical protein Deba_1732 [Desulfarculus baarsii DSM 2075] gi|301639777|gb|ADK85099.1| TPR repeat-containing protein [Desulfarculus baarsii DSM 2075] Length = 587 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 79/251 (31%), Gaps = 27/251 (10%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L T L+ + LA+ + ++ + L ++ ++ E + + Sbjct: 336 LATALLEAGRRDEALAQLERLAAMR----PDDAAILLKMARLLDEKKDRKRLTELYDRLG 391 Query: 148 ----QIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 P V L+ ++ R+ +A + A A PD V EA + K Sbjct: 392 KLRPDDPDINFNLGV--LHLDAGRLD--QAADKLAVVA-KAKPDDLDVQEAYFEALASQK 446 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 +W Q + + ++ L + A A+E+ + Sbjct: 447 KWD---QAAEQAAAMFAANDAAKVAAIVYPGLAANRPDKLAAMLDKALEAKPAAKSLYE- 502 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRL 317 A + + K R+A L K + P ++A L + L ++ Sbjct: 503 --MRATLALDREKPREAAKALAKAVEAFPD-DLAMAMRLAELYEALGNDAKA-LALFEKI 558 Query: 318 EEINKESVESL 328 + N + E+ Sbjct: 559 LDKNADYPEAQ 569 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 40/259 (15%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 Y+ A E L+ L L + A ++ L SP + + Sbjct: 175 YDQAVEMLKAALAEKDDPAL-QRKLADLYAKQDKPEQALALWSRLLPASPQDAQLLSDMA 233 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + W +A L++ + R +A L+ ++ G + ++ Sbjct: 234 AAQEQLRRWPQAAESLDR--LAGLQRGRLKAATLLRQAKALQLAGQTERAVEATSQAATA 291 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------------------PEIA 296 ++ A + + ++ + +L K ++P +A Sbjct: 292 DPQNVAVWNDLADQMGALGRRGQQLDVLTKAADLHPTDFILQQRLATALLEAGRRDEALA 351 Query: 297 NI--YTHLLSENTVGKLKRAL----------------RLEEINKESVESLVIVSKIALEM 338 + + ++ LK A RL ++ + + + + L+ Sbjct: 352 QLERLAAMRPDDAAILLKMARLLDEKKDRKRLTELYDRLGKLRPDDPDINFNLGVLHLDA 411 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G +DQA K + K P Sbjct: 412 GRLDQAADKLAVVAKAKPD 430 >gi|296133442|ref|YP_003640689.1| TPR repeat-containing protein [Thermincola sp. JR] gi|296032020|gb|ADG82788.1| TPR repeat-containing protein [Thermincola potens JR] Length = 345 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 4/193 (2%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 L +++ Y + N+ L Y A E + L + A Y Sbjct: 6 ENSLKQQVEFYKTAVANAPNDTAALLRLGYALAKSGMYREAEETYKKALAVEPDLYLAEY 65 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + + + A +A++I+PD + Y K+ ++ L KK A Sbjct: 66 GLGYIYLKEKRYDDAVLRFQRAININPDYVQAYYRLGYLYWEIKDLDKSQELL--KKVIA 123 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E N +A + + G + +++ + A + NK + Sbjct: 124 LESNHAKAHFYLGKVHNTL--GQWDKAKEYLEKAVAYNPDFDFAWYQLGLAFQGMNKTAE 181 Query: 279 AEVILEKIWKVNP 291 A + +K ++NP Sbjct: 182 ALAVFQKALEINP 194 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 15/140 (10%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+L + +L A G + ++L + + +A + +KR + +L Sbjct: 29 ALLRLGYAL--AKSGMYREAEETYKKALAVEPDLYLAEYGLGYIYLK--EKRYDDAVLRF 84 Query: 286 IWKVNPHPE-------IANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +N +P+ + +Y + + + LK+ + LE ++ + K+ Sbjct: 85 QRAININPDYVQAYYRLGYLYWEIKDLDKSQELLKKVIALES---NHAKAHFYLGKVHNT 141 Query: 338 MGSIDQAHAKAMLAMKIAPR 357 +G D+A A+ P Sbjct: 142 LGQWDKAKEYLEKAVAYNPD 161 >gi|255318855|ref|ZP_05360081.1| tetratricopeptide repeat domain protein [Acinetobacter radioresistens SK82] gi|255304111|gb|EET83302.1| tetratricopeptide repeat domain protein [Acinetobacter radioresistens SK82] Length = 519 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 67/176 (38%), Gaps = 7/176 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 L +++KE N ++LI + A G + + ++L+ + A Sbjct: 113 REILLNALRSSKEKNNPSILVLI--AGLEAQNGQLEQALVTINQALRKRPKVTGFILMKA 170 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKES 324 L++QN + A+ LEK + + +A + + S LK+ + + ++ Sbjct: 171 NLLMAQNDQLAAQQWLEKSSRKQKYNLDIRLAEVRFLVKSNQAESALKKLQGILKQWPDA 230 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378 E+L I ++++ +QA + + + L E+ + T K Sbjct: 231 EEALFIAGLTSIDLKQYEQAEKYLVELRYSDQYQNEAYYYLAVNAERKQHYETAKA 286 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 11/123 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPA--- 151 N A + + + L+Y Q+ L + + + L+ +L+I Sbjct: 345 TGNKKAALALLDEAVKN-LPDDPELIY---AQVLLLDPFQDREKLDQTLKHLLEIEPNSP 400 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 T A Y + + LN A++YA AL+ +P+ + + + +L ++ A+ L Sbjct: 401 TYLNAY--AYTLALQNRRLNEARQYAEHALEYAPEQASILDTLGYVCILQNDYDTAVRVL 458 Query: 212 NQK 214 + Sbjct: 459 AKA 461 >gi|119487755|ref|ZP_01621264.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119455588|gb|EAW36725.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 998 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 74/236 (31%), Gaps = 30/236 (12%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +Y+ A + +++ + +A +L + G L A+ KA++++P+ W + Sbjct: 335 KYSEAITAYQTAIELDNSLVYAYQNLGNLIKQQGSLTEAEAIYRKAIEVNPNH-WGSYLN 393 Query: 195 VQ-QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + AI E + L +A E+ Sbjct: 394 LGNILLEQTHFEDAIAIYQTALTLNPEAVEVQQNLNLA-------------------EAA 434 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-----ENTV 308 K A+ Q K KA + ++ P +Y L Sbjct: 435 KENP--APIYYTFAQQYYQQGKYNKAIQFFQNYLELQ--PGEVELYATLSDCFNQIHQPQ 490 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +K +++ S + + L G + A ++A A P F LL Sbjct: 491 EAIKVLQTGTQVHPTSGQLHFSLILQLLRQGETEAAISQAETAFNYLPNDYTFKLL 546 >gi|113476308|ref|YP_722369.1| glycosyl transferase family protein [Trichodesmium erythraeum IMS101] gi|110167356|gb|ABG51896.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101] Length = 1486 Score = 43.4 bits (101), Expect = 0.084, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 4/95 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + A + KA I PD W ++ + ++W A+ + + +++ + Sbjct: 536 QQEKWEEAVKVYEKASQIKPDNSWYYNSLGEALKKLEKWEEAVMAYRKAIQLNPDFSWSH 595 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 L + G + +++KL + Sbjct: 596 NNL----ADCLVKLGKREEAVVAYRQAIKLKPDFT 626 >gi|302876188|ref|YP_003844821.1| heat shock protein DnaJ domain-containing protein [Clostridium cellulovorans 743B] gi|307686920|ref|ZP_07629366.1| heat shock protein DnaJ domain-containing protein [Clostridium cellulovorans 743B] gi|302579045|gb|ADL53057.1| heat shock protein DnaJ domain protein [Clostridium cellulovorans 743B] Length = 1112 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 57/165 (34%), Gaps = 6/165 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI- 149 GL+ + A+N+ A K S+ + + A+E ++ ++ Sbjct: 771 GLIYLDAYNMEDAVKAFEKASEYNEDDAYPYNN--AGYACKVLGDLDRAYEFYKLSIERV 828 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 ++ IG A + + W + ++ Y +W++A+ Sbjct: 829 KDGEFLPHRNMAVYYRIIGQYEKAIEIYEMIAEKGDNPIWANKRILDVYKQIGDWTKALD 888 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + + ++W L+ A +G+ SY +++K Sbjct: 889 QVEKIFELEEDWV---MDFLLEGGDIFAYEGNARESYKLYKQAIK 930 >gi|254438924|ref|ZP_05052418.1| Sulfotransferase domain family [Octadecabacter antarcticus 307] gi|198254370|gb|EDY78684.1| Sulfotransferase domain family [Octadecabacter antarcticus 307] Length = 703 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 79/238 (33%), Gaps = 12/238 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L R GD A +A+ +PD + A + QK A Sbjct: 87 LAEMRRRGGDATGGLDAARRAVAANPDIAIAQANLGIALYDAGDLDG--AEAAQKAALAI 144 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + RA+ + D+GD A+ +L+L + + L+ +++ +A Sbjct: 145 DPRQPRAVNNLGS--IARDRGDRKAAADLYRRALRLSPSDDEIASNLGTVLVEDDREDEA 202 Query: 280 EVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 IL V P H I HL + + I+ + + + V +S+ Sbjct: 203 LRILLPYINVRPKVPAEMHAVIGRA--HLRRDALDDAERALRTAINIDPKHISAHVGLSQ 260 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + D+A A A +I P A I +K AL A D Sbjct: 261 VLQQKNHADKALVVAAAAARIDPNSATAHHQAGICLGELGAPEKARDAYNRALAADTD 318 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 12/201 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD +A +AL +SP + + V A+ L + Sbjct: 159 ARDRGDRKAAADLYRRALRLSPSDDEIASNLGTVLVEDDREDEALRIL---LPYINVRPK 215 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + + + + + ++ + I A + ++ L +N KA V+ Sbjct: 216 VPAEMHAVIGRAHLRRDALDDAERALRTAINIDPKHISAHVGLSQVLQQKNHADKALVVA 275 Query: 284 EKIWKVNPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +++P+ A+ + E RA + + +L+ + +A+E Sbjct: 276 AAAARIDPNSATAHHQAGICLGELGAPEKARDAYNRA---LAADTDFHAALISLGYLAME 332 Query: 338 MGSIDQAHAKAMLAMKIAPRK 358 +G D+A A+ ++ + Sbjct: 333 LGDADEARTMFERALALSSDE 353 >gi|159028723|emb|CAO88195.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 565 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 67/243 (27%), Gaps = 42/243 (17%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L YL + LA A +L A + + A + + Sbjct: 38 ALAYLWQGDRLLAAGDKESALSAYRTVLSFDENSVQAHIKIAQVLQSQKRYSEALQAYDR 97 Query: 180 AL------DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + P A+ + ++WS AI + + A + ++ Sbjct: 98 GFIVNDKPPMEPSQSNYLVALGDIFAQEEKWSEAIDAYRKAMIIKPTFK---AQFQLGKA 154 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L + + D + ++ L A K+ Q ++W P Sbjct: 155 LYSLQRWD--EAAKALQAAVFLDPTQGKAYFYLGKAYSEQ-----------QLW-----P 196 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 E + Y L E+ E + + ++ G ++A A+ Sbjct: 197 EASYAYQQAL---------------ELIPNQGEIYKKLGEALVKQGKWEEAEQIYRQALI 241 Query: 354 IAP 356 AP Sbjct: 242 YAP 244 >gi|121704604|ref|XP_001270565.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1] gi|119398711|gb|EAW09139.1| DnaJ and TPR domain protein [Aspergillus clavatus NRRL 1] Length = 544 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 59/179 (32%), Gaps = 7/179 (3%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174 + L L+ + LAE A + + T + +G + A Sbjct: 31 DTPLSSLIASAKAHLAEGFARDALLYFDAAISRDPTNYLTIFQRG--ATYLSLGRSSQAL 88 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-AKEWNR-NRAILLIAR 232 + L + PD + + +W A+ L + K + E+ +A + Sbjct: 89 GDFDRVLQLKPDFESALLQRARLRAKSADWEGALNDLEKAGKRVSAEYEELQKARDAALQ 148 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + ++GD + A ++ S+ A + + + L + +++P Sbjct: 149 ASDAENRGDWELCVNQANTAILKASTSLALRQTRAHCRFEKGEMEEGISDLAHVVQISP 207 >gi|83309106|ref|YP_419370.1| thioredoxin domain-containing protein [Magnetospirillum magneticum AMB-1] gi|82943947|dbj|BAE48811.1| Thioredoxin domain-containing protein [Magnetospirillum magneticum AMB-1] Length = 310 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 4/131 (3%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL-EKIW 287 IA + ++GD + + L+ ++ A + LI+ + +AE +L Sbjct: 141 YIAEAKRVLEEGDPQTAATIFNQILQEAPDNASAMAGLLRCLIAVGQTAQAESMLGRLAP 200 Query: 288 KVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 ++ HP+I A VG+ R + + ++ ++ G ++ A Sbjct: 201 EIARHPDITAVATALELARHAGGVGEAAELRRRLAADPDDHQARYDLALAYYAAGEVETA 260 Query: 345 HAKAMLAMKIA 355 + + K Sbjct: 261 VDELLDLFKRD 271 >gi|27375838|ref|NP_767367.1| hypothetical protein blr0727 [Bradyrhizobium japonicum USDA 110] gi|27348976|dbj|BAC45992.1| blr0727 [Bradyrhizobium japonicum USDA 110] Length = 370 Score = 43.4 bits (101), Expect = 0.085, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 11/205 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148 G A + A ++ + + Q R +++A E + + Sbjct: 89 RGRAYSAKGDRDRAMADYNEAIRLDPGYGPSYTS--RAQEYFNRRDFDLAIAGFTEAIER 146 Query: 149 IPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 P FA + + + GD + A T+A+ +P A W E + E Sbjct: 147 NPKQAYFATVMRGEAYAAK--GDTDHAVADYTEAMQRNPAAAWPYELRSAVHFDKGEIDE 204 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ N + A R++ K D + + E ++ + A + Sbjct: 205 ALDDCNSAVRLEPGS----AGGHYCRAVVLVKKDDPDGAIREFDEVTRIAPAFVKAYLAR 260 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 A + + + A ++ ++ P Sbjct: 261 AVAWHKKGDDKHAIADFDEAIRLQP 285 >gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 700 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 20/192 (10%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI---PATR 153 NI A K+ + L ++ + A + E L++ P + Sbjct: 453 CGNIKEASKIFEETDRDDIV---SLTAMINGYA--EHGKSKEAIDLFEKSLKVGFSPDS- 506 Query: 154 EFAVYSLYFESCRIGDLNSAQRYA---TKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 S+ G L+ Y + ++ P A +V A S A Sbjct: 507 -VTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRP-AKEHYGCMVDLLCRAGRLSEAEKM 564 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 +++ K+ +L+ ++ KGD+ A L+L A + A Sbjct: 565 IDE-MSWKKDDVVWTTLLIACKA-----KGDIERGRRAAERILELDPTCATALVTLANIY 618 Query: 271 ISQNKKRKAEVI 282 S +A + Sbjct: 619 SSTGNLEEAANV 630 >gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira platensis NIES-39] Length = 732 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 106/388 (27%), Gaps = 91/388 (23%) Query: 41 PFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNI 100 + ++ I L +++F + + P + K AL G+ + A + Sbjct: 311 LWTVVGIAATGLVGLMVIFGLFQVLNR-PDPV----------KSEAALKRGVERLEAGDP 359 Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEV----QIALAE-RQYNIAHE-------------- 141 A K + Q ++E Q Y A + Sbjct: 360 EAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSL 419 Query: 142 KLEMM---------------LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 M L T F L + +A T+ + PD Sbjct: 420 AYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLA--HYTQENYEAAILDYTEVIRRQPD 477 Query: 187 APWVTEAVVQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD- 238 A +V A +++ AI + A +NR RA + Sbjct: 478 HSEAYRARGSAHVKAGNLQAGMADYTEAIRL--NPQSAAAYYNRGRARFHLGDYQGALAD 535 Query: 239 -------KGDMIAS-------------YHDAIESLKLCDNSIM---------ASICAAKS 269 + D + Y AIES + ++ Sbjct: 536 YNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTAMDYNNRCIAYLNVQN 595 Query: 270 L-ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + KA + K + + + H L+E+ + + +N ES Sbjct: 596 YDAAIGDCTKAIELEPNNSKAHSNRGL----VHSLAEDYEAAIADYSQAISLNPNDAESY 651 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ E+G+ QA A A++I P Sbjct: 652 SNRAQAHAELGNYSQAIADYAQAIRIRP 679 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 70/236 (29%), Gaps = 39/236 (16%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 E GD +A + +++ + PD Y +++ +AI Q K Sbjct: 349 RG--VERLEAGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKL 406 Query: 218 AKE-----WNRNRAI-------------------------LLIARSLENADKGDMIASYH 247 +NR+ A R L + + + A+ Sbjct: 407 DPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAAIL 466 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THL 302 D E ++ + A + + + + ++N P+ A Y Sbjct: 467 DYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLN--PQSAAAYYNRGRARF 524 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + G L ++ ++ E+ + +G+ + A ++++ P Sbjct: 525 HLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLNPTA 580 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 4/117 (3%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A TKA+++ P+ + LA+++ AI +Q N A Sbjct: 596 YDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNP----NDAESY 651 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 R+ +A+ G+ + D +++++ N A S +R A E+ Sbjct: 652 SNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISDFEQA 708 >gi|295676138|ref|YP_003604662.1| cellulose synthase operon C domain protein [Burkholderia sp. CCGE1002] gi|295435981|gb|ADG15151.1| cellulose synthase operon C domain protein [Burkholderia sp. CCGE1002] Length = 1320 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 35/248 (14%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L ++ DL +A+ +A PD + + A A T + Sbjct: 320 RGL--QALARNDLTAAEPLLARAASARPDDADAVGGLGIARMRAGRHDEARTLFLRAAAL 377 Query: 218 AKEWNRNRAILL--------IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 A + L +A+ A G + A +L + ++ A + A + Sbjct: 378 APDNRTKWQSLARTAQFWGTLAQGRTAAAAGHAQDAERAARAALAMEPDNPDAKLMLADA 437 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 L++Q+ R AE +L + P +A + + G+ + L ++++S Sbjct: 438 LLAQHDWRAAEPLLRDM-LSGQTPSVAALRSTQTLFENTGRAAQVEPLI----DALQSRF 492 Query: 330 IVS--KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + +L A +A L K A LLA E+ + + AL Sbjct: 493 TAADDRASL-------ARLRADLLAKQAD-----QLLADGERGPAAQRYEA------ALR 534 Query: 388 AMPDPLWI 395 + PD W Sbjct: 535 SEPDAAWT 542 >gi|255012572|ref|ZP_05284698.1| TPR domain-containing protein [Bacteroides sp. 2_1_7] Length = 999 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 21/206 (10%) Query: 93 MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147 ++ A ++ A+++ S V S F E + +I ++ Y A E + + Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL---DISPDA-PWVTEAVVQQYVLAKE 203 + P +E A L + G A A L +SP+ + Y+ K+ Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEALLAANDLLKEPKLSPEIMSEARYVRAKAYISLKQ 891 Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LCD 257 ++A+ L + K+ + + A LL +N D + + IE+ L Sbjct: 892 ENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLAR 951 Query: 258 NSIMASICAAKSLISQNKKRKAEVIL 283 I A I Q +A L Sbjct: 952 GFI----LLADIYIRQGDDFQARQYL 973 >gi|254411584|ref|ZP_05025360.1| Sel1 repeat family [Microcoleus chthonoplastes PCC 7420] gi|196181306|gb|EDX76294.1| Sel1 repeat family [Microcoleus chthonoplastes PCC 7420] Length = 338 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 57/194 (29%), Gaps = 7/194 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G++ A +A ++P + A + A Q + A + Sbjct: 91 IQQGNVADAIAAFRQAAQLNPQLAPAHYNLGLALRQAGQLQAAADAFYQATQIAPNF--- 147 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+ + ++ + +++L +A L + A + Sbjct: 148 -ALAYANLGAALLEGKNLPQARDALRRAIELDPELGVAHYNYGLVLSELGEYEVAIAAFQ 206 Query: 285 KIWKV---NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ P P +L + +I+ + E+ + I E G + Sbjct: 207 NAMQLSSNAPEPAYHLGLVYLRQGQLEQAKAAFEQAIKISPQYPEAYYNLGSILFEQGDL 266 Query: 342 DQAHAKAMLAMKIA 355 D A A + + Sbjct: 267 DGALAAFRQSAESN 280 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 4/159 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A Q+ A Y+L + G L +A +A I+P+ Sbjct: 93 QGNVADAIAAFRQAAQLNPQLAPAHYNLGLALRQAGQLQAAADAFYQATQIAPNFALAYA 152 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + K +A L + A E + + L ++ G+ + + Sbjct: 153 NLGAALLEGKNLPQARDAL----RRAIELDPELGVAHYNYGLVLSELGEYEVAIAAFQNA 208 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++L N+ + + Q + +A+ E+ K++P Sbjct: 209 MQLSSNAPEPAYHLGLVYLRQGQLEQAKAAFEQAIKISP 247 >gi|149921658|ref|ZP_01910107.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1] gi|149817502|gb|EDM76972.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1] Length = 763 Score = 43.4 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 32/96 (33%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 ALA+ + + A + + AV L +G A YA KA + P Sbjct: 659 ALAKGKRDKAERLFHKAIAADSRNASAVEGLARIHFDLGAYGEALGYAKKASRLRPRDEG 718 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 V + Y+ +S A + + + R Sbjct: 719 VRLLLGDAYLKVLRYSNARAEYEKAQALGSPLAKKR 754 >gi|325925872|ref|ZP_08187241.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118] gi|325543703|gb|EGD15117.1| family 3 adenylate cyclase [Xanthomonas perforans 91-118] Length = 837 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L + G +A + KA+DI P V+ + ++ +A L ++ Sbjct: 418 YALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKKATETLRVAEQF 477 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A+ + + ++ D + I+ +L + A AA L N+ Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADSWIQMAELYPDYAPAQANAAMDLFVANRFA 534 Query: 278 KA 279 A Sbjct: 535 DA 536 >gi|317419434|emb|CBN81471.1| DnaJ homolog subfamily C member 7 [Dicentrarchus labrax] Length = 504 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L ++ A ++ +A Sbjct: 177 KILKAECLALLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIDKAVQFFVQA 234 Query: 181 LDISPDAPWVTEA-----VVQQYVLAK-------EWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A ++ + A + + A L Sbjct: 235 LRMAPDHEKARLACRNAKALKAKKDEGNQAFKNNNYDAAYQLYTEALTIDPNNIKTNAKL 294 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R+ A + + D ++KL D I A + A+ ++ + +A EK+++ Sbjct: 295 YCNRATAGAKLKKLNEAIDDCTNAIKLDDTYIKAYLRRAQCYMNTEQYEEAVRDYEKVYQ 354 Query: 289 VN 290 Sbjct: 355 TE 356 >gi|148689710|gb|EDL21657.1| mCG142017, isoform CRA_b [Mus musculus] Length = 754 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195 A E L++ Y+L + + N A + +AL+++P A++ Sbjct: 587 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 646 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q + ++ N A + D + +++KL Sbjct: 647 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 703 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A A K+ KA ILE+ Sbjct: 704 QPDFRSALFNLALLYSQTAKELKALPILEE 733 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%) Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A I+P+ V + A Q ++ + I+R Sbjct: 526 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 581 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + +++L+L N+ A I + +A + ++NP ++A Sbjct: 582 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 641 Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L+ E+ KL KR L + + +A++ +A + A+ Sbjct: 642 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 701 Query: 353 KIAPRKEIFL 362 K+ P L Sbjct: 702 KLQPDFRSAL 711 >gi|26336877|dbj|BAC32122.1| unnamed protein product [Mus musculus] Length = 753 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195 A E L++ Y+L + + N A + +AL+++P A++ Sbjct: 586 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 645 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q + ++ N A + D + +++KL Sbjct: 646 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 702 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A A K+ KA ILE+ Sbjct: 703 QPDFRSALFNLALLYSQTAKELKALPILEE 732 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%) Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A I+P+ V + A Q ++ + I+R Sbjct: 525 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 580 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + +++L+L N+ A I + +A + ++NP ++A Sbjct: 581 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 640 Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L+ E+ KL KR L + + +A++ +A + A+ Sbjct: 641 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 700 Query: 353 KIAPRKEIFL 362 K+ P L Sbjct: 701 KLQPDFRSAL 710 >gi|78223139|ref|YP_384886.1| peptidase M, neutral zinc metallopeptidase, zinc-binding site [Geobacter metallireducens GS-15] gi|78194394|gb|ABB32161.1| Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Geobacter metallireducens GS-15] Length = 426 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 13/135 (9%) Query: 270 LISQNKKRKAEVILEKIWKV-NPHP----EIANIYTHLLSENTVGK------LKRALRLE 318 LI + + KA LEK + + + P +A Y L + + + + + Sbjct: 40 LIERGEIEKAIEQLEKAYSLYSSDPILKGNLATAYA-LQGQRLLDRKSYADAAGQFEKAL 98 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDK 377 + + ++ + A + A + E L +I + Sbjct: 99 VLFPDEPRYHLLRGIAFTLAKNFPLARHELQQARNLGGETAEGLYFLGRIHYEEGETDEA 158 Query: 378 ILYWTQSALHAMPDP 392 + W ++A A DP Sbjct: 159 LQNWEKAAALAPSDP 173 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 30/86 (34%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + F +E +LL + + +A +L+ + +Y L Sbjct: 88 ADAAGQFEKALVLFPDEPRYHLLRGIAFTLAKNFPLARHELQQARNLGGETAEGLYFLGR 147 Query: 163 ESCRIGDLNSAQRYATKALDISPDAP 188 G+ + A + KA ++P P Sbjct: 148 IHYEEGETDEALQNWEKAAALAPSDP 173 >gi|328701581|ref|XP_003241648.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform 2 [Acyrthosiphon pisum] Length = 975 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 15/213 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---GDLNSAQRYATKALDISPDAPWV 190 A E +Q+ + A+ L GD+ +KA I P V Sbjct: 9 GNAEKARLAFERAIQLDSKCVGALVGLAILKLNGENPGDIKLGVNMLSKAYTIDTTNPMV 68 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + K++++ L + E RA + + + ++ Sbjct: 69 LNHLSNHFFFKKDYTK-YELLARHALQNTENEAMRAESCYQMARAFHVQNNYDQAFQYYY 127 Query: 251 ESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHL 302 ++ + ++ + I A EK+ K HP + ++Y + Sbjct: 128 QATQFAPVTFVLPHYGLGQMYIYGGDMENAAQCFEKVLKA--HPGNYEAMKILGSLYANS 185 Query: 303 LSENTVGKLK-RALRLEEINKESVESLVIVSKI 334 ++ K ++ E + VE+ + +++I Sbjct: 186 KNQQKRDIAKSHLKKVTEHFPDDVEAWIELAQI 218 >gi|330821872|ref|YP_004350734.1| Cellulose synthase operon C-like protein [Burkholderia gladioli BSR3] gi|327373867|gb|AEA65222.1| Cellulose synthase operon C-like protein [Burkholderia gladioli BSR3] Length = 1638 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 97/317 (30%), Gaps = 34/317 (10%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-----VYLLEVQIALAERQYNIAH 140 +A+ G ++ +++ AR + V + L V L + A A Sbjct: 292 RAIGDGFAALDRNDLATARARFNAVLAGAPNDTDALGGLGIVELKQEHFREARNDLERAS 351 Query: 141 EKLEMMLQIPATREFAV---YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 + A + S + GD+ A+ A+ P P + + Sbjct: 352 RGGDPSRWREALKSAGYWSDTSDALVAQNRGDVAKAKSLFEHAIATDPSEPAAQLMLGEL 411 Query: 198 YVLAKEWSRAITFLN---QKKKNAKEWNRNR--AILLIARSLENADKGDMIASYHDAIES 252 + + A +++ + + R A+ R E D + + A ++ Sbjct: 412 LLANHDPRGAEQAYRMALRRQADNPDAIRGLVGALAAQGRGDEALQFADQLTAEQQA-KA 470 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENT 307 L A A++ +Q +A + E +P P ++A IY + Sbjct: 471 GGLDRLRGTAEAAQARAAEAQGDLGRARSLFEDALVGSPDDPWLRLDLARIY--VRQGAV 528 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 L + + ++L + +A + + ++AP + + ++ Sbjct: 529 ASARSMMDGLLAAHPDMPDALYAGALLAEQTHDYG---DGLRMLDRVAPAQRTAA-MGEL 584 Query: 368 EQANSHNTDKILYWTQS 384 ++ W Sbjct: 585 QR---------RLWLAQ 592 >gi|320581017|gb|EFW95239.1| Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) [Pichia angusta DL-1] Length = 618 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 22/246 (8%) Query: 135 QYNIAHEKLEMMLQIPATRE-------FAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Y A + Q+ TR ++ L+ E DL+ + + +IS D+ Sbjct: 338 NYEEAENYFIKLRQLDRTRIEEMEYYSTLLWHLHKEM----DLS---FLSHELHEISKDS 390 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P AV + L +E AI + + K + A + E + Sbjct: 391 PEAWIAVGNLFSLNREPDEAIKCFQKANQVDKNF----AYSYTLQGHEYLSNDAFENALE 446 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 ++ L A + RKAE K ++NP I ++ E Sbjct: 447 CFRHAILLDKRHYNAFYGIGMVYLKLGDFRKAEFHFRKAVEINPVNVILICCVGMVLEKL 506 Query: 308 VGKLKRALRLEEINKESVESLVIV---SKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 K + + ++ S++ + ++ + + D A +AP + L Sbjct: 507 GKKEQALRQYIFASRLQPLSMLALFKKAQALISLKRYDLALKDFEKLENLAPDEASVHFL 566 Query: 364 LAQIEQ 369 L ++ + Sbjct: 567 LGKLYR 572 >gi|298715161|emb|CBJ27849.1| NB-ARC and TPR repeat-containig protein [Ectocarpus siliculosus] Length = 1251 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 101/313 (32%), Gaps = 48/313 (15%) Query: 110 VSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPATREFA------VYSLY 161 V + + L +L + AL + Y+ A E I + SL Sbjct: 848 VEKTLGVDHPNLAQMLNSRAALLDRQGMYDEAGPLYERSQAIRE-KALGPEHPDVARSLN 906 Query: 162 FES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW----------SRAI 208 + CR G A+ +A+ I A + V + + W + + Sbjct: 907 KRAWLLCRQGKHEQAEPLNERAISIWEGALESEQPRVAPGLEMRAWVLRAQGKHAEAETL 966 Query: 209 TFLNQK--KKNAKEWNRNRAILLIARSLENADKGDMIASY---HDAI----ESLKLCDNS 259 + L+Q +K + + A+ L R+ E +G + AI ++ + Sbjct: 967 SELSQAMHQKALGPEHSDVALSLSNRADELYRQGKDTEAQPLFERAIKIWEKAHRHDHPL 1026 Query: 260 IMASIC-AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 + + A L +Q K KA +LE+ + + +T+ L L Sbjct: 1027 VANVLHNRAGLLSAQGKYAKAHALLERALAIR------EGALGVDHPDTITSLGALADLY 1080 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 ++ K + + A +A + P L + + ++ + Sbjct: 1081 AKQG-------LLEKATPVLEEVVSARERAQG--RDHPDVASALSMWAVVLSDQGKNAEA 1131 Query: 379 LYWTQSALHAMPD 391 L + AL A+ + Sbjct: 1132 LALFEKAL-AIRE 1143 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 26/159 (16%) Query: 166 RIGDLNSAQRYATKALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 G A +AL I PD A+ Y +A L + Sbjct: 1040 AQGKYAKAHALLERALAIREGALGVDHPDTITSLGALADLYAKQGLLEKATPVLEEVVSA 1099 Query: 218 AKEWNRNR----AILLIARSLENADKGDMIASYHDAIESLKLC--------DNSIMASIC 265 + A L ++ +D+G + ++L + ++I + Sbjct: 1100 RERAQGRDHPDVASALSMWAVVLSDQGKNAEALALFEKALAIREGALGVDHPDTITSLGA 1159 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP------HPEIANI 298 A Q KA +LE++ HP++A+ Sbjct: 1160 LADLYTKQGLLDKASRLLEEVVNARERIQGSDHPDVASA 1198 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 37/184 (20%) Query: 163 ESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 E R G AQ +A+ I P V ++++A L + Sbjct: 995 ELYRQGKDTEAQPLFERAIKIWEKAHRHDHPLVANVLHNRAGLLSAQGKYAKAHALLERA 1054 Query: 215 KK---------NAKEWNRNRAILLIARSLENADKGDMI-----ASYHDAIESLKLCDNSI 260 + A+ + +K + ++ A + + Sbjct: 1055 LAIREGALGVDHPDTITSLGALADLYAKQGLLEKATPVLEEVVSARERAQ--GRDHPDVA 1112 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP------HPE-------IANIYTHLLSENT 307 A A L Q K +A + EK + HP+ +A++YT + Sbjct: 1113 SALSMWAVVLSDQGKNAEALALFEKALAIREGALGVDHPDTITSLGALADLYTKQGLLDK 1172 Query: 308 VGKL 311 +L Sbjct: 1173 ASRL 1176 >gi|294339622|emb|CAZ87981.1| conserved hypothetical protein; putative Tetratricopeptide (TPR) repeat [Thiomonas sp. 3As] Length = 390 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 57/197 (28%), Gaps = 38/197 (19%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A ++H + + E L Q + A E + + Sbjct: 87 GEYERAVRVHQNLLARADLPREARERAQLALAQDFFKAGLLDRAESAYEDLRRS------ 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQK 214 YA++AL A++Q ++W++AI + Sbjct: 141 -------------------VYASQAL----------TALLQISERTQDWNKAIARAGELE 171 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + R A ++++ G + +L+ + + A+ Sbjct: 172 LRATGAYQRQIAQYWCELAVQHHAAGRAQEAQQSLDAALQAAPQGVRPRLLRAQWAQQHG 231 Query: 275 KKRKAEVILEKIWKVNP 291 + A ILE I V P Sbjct: 232 ELESALRILESIDLVQP 248 >gi|262304941|gb|ACY45063.1| acetylglucosaminyl-transferase [Acanthocyclops vernalis] Length = 289 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVAESEECYNTALRLNP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNXASILQQQGKLNEALMHYKEAIRIQ--PAFAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ + + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMHDIQGALQCYTRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 4/106 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G LN A + +A+ I P + + A+ + + + Sbjct: 99 QQQGKLNEALMHYKEAIRIQPAFADAYSNMGNTLKEMHDIQGALQCYTRAIQINPAF--- 155 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + D G++ + +LKL N A A L Sbjct: 156 -ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPNFPDAYCNLAHCL 200 >gi|171185132|ref|YP_001794051.1| peptidase M1 membrane alanine aminopeptidase [Thermoproteus neutrophilus V24Sta] gi|170934344|gb|ACB39605.1| Peptidase M1 membrane alanine aminopeptidase [Thermoproteus neutrophilus V24Sta] Length = 824 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 46/125 (36%), Gaps = 7/125 (5%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++E + + ++ L D + AA++L ++E W+ Sbjct: 554 QAVEALKRNGSPKAVEALAKA--LGDGFWGVAAEAARALGEIGTGEAVYKLIEGYWRAR- 610 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG--SIDQAHAKAM 349 HP + L + + A L+++ + ES + ++ A +G + A Sbjct: 611 HPRVRRAIVEALG--NARRKEAAEFLDKVLHSAEESYYVRAEAARALGRIRWEYAEHSLR 668 Query: 350 LAMKI 354 A++ Sbjct: 669 KALEY 673 >gi|72382577|ref|YP_291932.1| TPR repeat-containing protein [Prochlorococcus marinus str. NATL2A] gi|72002427|gb|AAZ58229.1| TPR repeat [Prochlorococcus marinus str. NATL2A] Length = 323 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 7/135 (5%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + + I+S ++ + + L SQ K +A+ +EK + P Sbjct: 75 YAILCKESLRENEALDLLIKSTDRYPDNPESHAIISDILRSQGKLEEAQFSIEKAINIKP 134 Query: 292 -----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 H + I+ L + + + IN +E+ + + + +++ + +A + Sbjct: 135 DVADYHFNLGLIFIGLRILSKA--IMSLQKAILINPNLIEAYLNLCSVHMDLSNFSEAES 192 Query: 347 KAMLAMKIAPRKEIF 361 A+K+ P I Sbjct: 193 SIKKAIKLDPNSSIA 207 >gi|189346371|ref|YP_001942900.1| hypothetical protein Clim_0842 [Chlorobium limicola DSM 245] gi|189340518|gb|ACD89921.1| TPR repeat-containing protein [Chlorobium limicola DSM 245] Length = 201 Score = 43.4 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 47/134 (35%), Gaps = 13/134 (9%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 S+A+ L++ N R A AR++ + + D + ++ L + + A Sbjct: 37 SQALELLDRMLDNG----RRDAQAYYARAVAYLSMNNYRKAGCDFLRTIALDPDFLEAYK 92 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHL-LSENTVGKLKRALRLE 318 ++ ++ A L+ + +P + ++Y + E + Sbjct: 93 HLGFIQLTLGREEAALKTLKNALEKDPAHSGLYCVLGDVYLDIGEPEKAKD---AFEKAF 149 Query: 319 EINKESVESLVIVS 332 E+ E E ++ Sbjct: 150 ELAPEDAEPHCKLA 163 >gi|222054793|ref|YP_002537155.1| hypothetical protein [Geobacter sp. FRC-32] gi|221564082|gb|ACM20054.1| TPR repeat-containing protein [Geobacter sp. FRC-32] Length = 492 Score = 43.4 bits (101), Expect = 0.088, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 59/189 (31%), Gaps = 16/189 (8%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E L + T Y L + G+L A +L + P +++ Sbjct: 37 EEAQEILAAAQKEQPTSSAVAYHLGLALKQTGNLEQAVANLKMSLKLEPMVSDAYPELIE 96 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 L +++ A F+ + + R + + A + + I++ ++ Sbjct: 97 LLYLQNDFAEAGKFIAMAESAGVKPAR----VAFLKGQVLAGNDNSEGAVAALIKAKEID 152 Query: 257 DNSI-MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 A A+ + Q + KA+ L+ + +P E+A Sbjct: 153 PALAQQADFQIAQIYLKQGDRDKAQESLKSVISGDPSSELAGFAREYE-----------R 201 Query: 316 RLEEINKES 324 RL + Sbjct: 202 RLTAAAPRN 210 >gi|145641115|ref|ZP_01796696.1| hypothetical protein CGSHiR3021_08596 [Haemophilus influenzae R3021] gi|145274276|gb|EDK14141.1| hypothetical protein CGSHiR3021_08596 [Haemophilus influenzae 22.4-21] Length = 240 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 15/187 (8%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y KEW +A+ + K + N ++ + + ++L + Sbjct: 2 IYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVS 61 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------PEIANIYTHLLSENTVG 309 + AS+ A + + ++A ILE + + NP P + + Y L + Sbjct: 62 PTCVRASLLLANLAMLDGQYQQAVKILENVLEQNPDYTGEILLP-LKHCYEELNQLDNFE 120 Query: 310 K-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-LLLA-Q 366 L RA ++ + E + + K+ E A AK + P IF + Q Sbjct: 121 LFLIRAGQII----NNDEVELALVKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQ 176 Query: 367 IEQANSH 373 I+ A Sbjct: 177 IDDAEDG 183 >gi|312129427|ref|YP_003996767.1| hypothetical protein Lbys_0652 [Leadbetterella byssophila DSM 17132] gi|311905973|gb|ADQ16414.1| hypothetical protein Lbys_0652 [Leadbetterella byssophila DSM 17132] Length = 274 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 26/70 (37%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 DL A +A KA++ PDA WVT + + A+ AK + + Sbjct: 204 KDLKKALEWANKAVEQQPDAFWVTHTKAKIQAKLGDKKGAMETAKLSLSQAKAASNQDYV 263 Query: 228 LLIARSLENA 237 L + + Sbjct: 264 ALNEKLMATL 273 >gi|158517929|ref|NP_001103483.1| transmembrane and TPR repeat-containing protein 3 isoform 1 [Mus musculus] gi|148689709|gb|EDL21656.1| mCG142017, isoform CRA_a [Mus musculus] gi|148689711|gb|EDL21658.1| mCG142017, isoform CRA_a [Mus musculus] Length = 920 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195 A E L++ Y+L + + N A + +AL+++P A++ Sbjct: 586 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 645 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q + ++ N A + D + +++KL Sbjct: 646 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 702 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A A K+ KA ILE+ Sbjct: 703 QPDFRSALFNLALLYSQTAKELKALPILEE 732 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%) Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A I+P+ V + A Q ++ + I+R Sbjct: 525 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 580 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + +++L+L N+ A I + +A + ++NP ++A Sbjct: 581 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 640 Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L+ E+ KL KR L + + +A++ +A + A+ Sbjct: 641 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 700 Query: 353 KIAPRKEIFL 362 K+ P L Sbjct: 701 KLQPDFRSAL 710 >gi|145356787|ref|XP_001422607.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582850|gb|ABP00924.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 847 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 86/258 (33%), Gaps = 52/258 (20%) Query: 160 LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L R GD+ A+ A D +PD+ + A + E RA L + ++ Sbjct: 565 LMGAKERWLSGDVTRAREILQSAFDANPDSEEIWLAAFKLEFENGEIDRARMLLAKARER 624 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R + + +L + GD A E I Sbjct: 625 LADCAR----VWMKSALVEREAGDEQAERKLLDEG------------------IENGNAS 662 Query: 278 KAEVILEKIWKVNP---HPEIANIYTHLLSENTVGKLKRAL-RLEEINKESVESLVIVSK 333 KA +ILE NP H +A + E G ++ A + +E S +++++ Sbjct: 663 KARIILETARAKNPSNEHLWLAA----VRQERESGNIQLAESTIARALQECPTSGLLLAE 718 Query: 334 IALEMGSIDQAHAKAMLAMKI---APRKEIFLLLAQIEQANSHNT--DKILYWTQSALHA 388 ++ Q +K++ A++ P ++A I + DK W A+ Sbjct: 719 -SVRFAPRPQRKSKSVDALRRCDNDPY-----IIAAIAILFWADRKLDKARSWWNRAVTI 772 Query: 389 MPDPLWISDDGYLSSVWL 406 PD + W Sbjct: 773 APD---------IGDHWA 781 >gi|134035048|sp|Q8BRH0|TMTC3_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 3 Length = 920 Score = 43.4 bits (101), Expect = 0.089, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 5/150 (3%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVV 195 A E L++ Y+L + + N A + +AL+++P A++ Sbjct: 586 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 645 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q + ++ N A + D + +++KL Sbjct: 646 MQESGE---VKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKL 702 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A A K+ KA ILE+ Sbjct: 703 QPDFRSALFNLALLYSQTAKELKALPILEE 732 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 11/190 (5%) Query: 180 ALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 A I+P+ V + A Q ++ + I+R Sbjct: 525 AARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQ----AYISRGELLLK 580 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + +++L+L N+ A I + +A + ++NP ++A Sbjct: 581 MNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALF 640 Query: 299 -YTHLLSENTVGKL-----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L+ E+ KL KR L + + +A++ +A + A+ Sbjct: 641 NSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAI 700 Query: 353 KIAPRKEIFL 362 K+ P L Sbjct: 701 KLQPDFRSAL 710 >gi|332994520|gb|AEF04575.1| hypothetical protein ambt_15325 [Alteromonas sp. SN2] Length = 925 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 30/80 (37%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A E +L + +L F S + G+L+ A+ A KA+ + P+ Sbjct: 788 QIASDKQTAIATYETILTKTPDNFVVLNNLAFLSFQNGNLDKAETMAKKAVSLQPENADS 847 Query: 191 TEAVVQQYVLAKEWSRAITF 210 + + Q + + A+ Sbjct: 848 VDTLAQILIAKGDKEAALKL 867 >gi|327541384|gb|EGF27924.1| protein containing ASPIC/UnbV domain [Rhodopirellula baltica WH47] Length = 1041 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 27/268 (10%), Positives = 80/268 (29%), Gaps = 39/268 (14%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---I 149 M+I + + P A +A+ + E ++ ++ Sbjct: 118 MAIGSADAPSADLFEK-----------------TGHAYMAQGRTFDTIELMKRCVRLHPD 160 Query: 150 PATREFAVYSLYF-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 A R ++ L ++ + + + + +++ + + +A+ Sbjct: 161 DAGRRVSLIGLMISQALERDAVVHLRYLIQRGQAGISELVIASDSS-RPQADEQMCKQAL 219 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + R A R E ++ + H + + A + Sbjct: 220 KLNPSDLRPQYAMTRFDAYNH--RWSEVLEQLKPVVDRH---------PDFVPAWAFLTR 268 Query: 269 SLISQNKKRKAEVI----LEKIWKVNPHPEIAN-IYTHLLSENTVGKLKRALRLEEINKE 323 + + +N E I ++ +P IA ++ + ++ + ++ Sbjct: 269 AAVEENDIETLERITNRDFADEYESHPQVWIARGVWADQNGDTSLA-VASFAEAVRLDPN 327 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+L ++ G ++ + A+ A Sbjct: 328 HHEALTKLTTALAASGDLELSQRAAVRA 355 >gi|312881061|ref|ZP_07740861.1| TPR repeat-containing protein [Aminomonas paucivorans DSM 12260] gi|310784352|gb|EFQ24750.1| TPR repeat-containing protein [Aminomonas paucivorans DSM 12260] Length = 439 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 38/195 (19%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A+ ++ A+ + K E R + I LE+ G + L+ Sbjct: 90 EARRYAPALKLFRKVLKERPE--RKDTLFQIGVCLESL--GRPGEALDAFASHLENQPRD 145 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 A I + L+S + A LEK Sbjct: 146 EGAWIRTGRILLSLGRPESALDPLEKA-------------------------------VR 174 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDK 377 + ++ E+ ++ ++ +GS D+A LA+ P + + LL A+ + Sbjct: 175 LAPKNPETQRLLGEVYRRLGSRDRAVEHLSLALTWNPDQ-VDTLLRDAKALMGLKAYGEA 233 Query: 378 ILYWTQSALHAMPDP 392 + + ++A A DP Sbjct: 234 LRGYRKAAELAPEDP 248 >gi|301308217|ref|ZP_07214171.1| TPR-domain containing protein [Bacteroides sp. 20_3] gi|300833687|gb|EFK64303.1| TPR-domain containing protein [Bacteroides sp. 20_3] Length = 999 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 21/206 (10%) Query: 93 MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147 ++ A ++ A+++ S V S F E + +I ++ Y A E + + Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL---DISPDA-PWVTEAVVQQYVLAKE 203 + P +E A L + G A A L +SP+ + Y+ K+ Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEALLAANDLLKEPKLSPEIMSEARYVRAKAYISLKQ 891 Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LCD 257 ++A+ L + K+ + + A LL +N D + + IE+ L Sbjct: 892 ENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLAR 951 Query: 258 NSIMASICAAKSLISQNKKRKAEVIL 283 I A I Q +A L Sbjct: 952 GFI----LLADIYIRQGDDFQARQYL 973 >gi|317050410|ref|YP_004111526.1| hypothetical protein Selin_0213 [Desulfurispirillum indicum S5] gi|316945494|gb|ADU64970.1| hypothetical protein Selin_0213 [Desulfurispirillum indicum S5] Length = 451 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 4/92 (4%) Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +LE + NP + L S + RL + +++ + + +++ +E+ Sbjct: 61 LLEYEFAGNPAYDALFGLAALRSGDPARASWALERLVLVEPDNLNAKLALARAYMELNRF 120 Query: 342 DQAHAKAMLAMKIAPRKEIF----LLLAQIEQ 369 ++A ++ P I L A++E+ Sbjct: 121 NRAQGLLDEVRQMQPAARILQAAEQLQAELEE 152 >gi|282902039|ref|ZP_06309937.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281193126|gb|EFA68125.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 267 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 14/145 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY------ 176 +L Q A + +LQ ++ L A ++ Sbjct: 113 KVLLAQATQQIGNTQEASQIYRSILQTQPGNIQSLQGLVKLELDQKRPEVAIQFLKETIS 172 Query: 177 -ATKALDISPDAPW--VTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A K+ + P + + ++ + Y K +AI+ + K + R ++A+ Sbjct: 173 NAEKSNSVQPGSFDIIAIQLLLGRVYSSQKNPDQAISLYEEVMKQYPQDFRP----VLAK 228 Query: 233 SLENADKGDMIASYHDAIESLKLCD 257 ++ ++G + + +L L Sbjct: 229 AILLKEQGKINEAKPLFDSALTLAP 253 >gi|146343033|ref|YP_001208081.1| putative adenylate cyclase [Bradyrhizobium sp. ORS278] gi|146195839|emb|CAL79866.1| putative Adenylate cyclase [Bradyrhizobium sp. ORS278] Length = 602 Score = 43.4 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 94/313 (30%), Gaps = 28/313 (8%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L++ A + + ++ L I A + M Sbjct: 275 LVAPENGEQLWAGRYDRDIGDLFAVQDDITANLCTALIPEIY--RAEAAVPVRSMTTDLT 332 Query: 152 T--REFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPWVT----EAVVQ------Q 197 R + L Y++ + D S+ +A+ I P ++Q Sbjct: 333 AWDRF--LRGLSHYYQPTKA-DYESSIALFREAIKIDPGLAIAHTYLGTILLQGIHFGWI 389 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + W A+T + + + ++L +++ G + A A ++L+L Sbjct: 390 RNSRELWDEAMTLAEASVRLDPRSSFSYSLLAYVHAMQ----GRVEAGIDGARKALQLNP 445 Query: 258 NSIMASICAAKSLISQNKKRKAEVIL-EKIWKVNPHP----EIANIYTHLLSENTVGKLK 312 + A + + R+A + + N P + + ++H + L Sbjct: 446 YDMGARGVLGVCHLVGGEHREAIELFSVAAQRGNSDPRYQWSVLSAFSHYMLGQYDASLS 505 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 A N ++ L I + ++G +A + P I LL+ I N Sbjct: 506 WARESHYQNPNHLQCLAIRAAALAQLGRSVEAGEAVAALLSQHPWMTIERLLSNIRWRNP 565 Query: 373 HNTDKILYWTQSA 385 + A Sbjct: 566 ADIAHYRDGLAKA 578 >gi|288556107|ref|YP_003428042.1| hypothetical protein BpOF4_15505 [Bacillus pseudofirmus OF4] gi|288547267|gb|ADC51150.1| hypothetical protein BpOF4_15505 [Bacillus pseudofirmus OF4] Length = 419 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 26/186 (13%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y L GD N + + KA+ + + P V + + Y + ++ A+ + + Sbjct: 138 YGLGEFYLERGDYNKSIPHLKKAVHRAEELPNIEVDLKMAEAYSASGQFEEALVYYEKGL 197 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQN 274 K+ L GDM + +E+LK L + AK+L ++N Sbjct: 198 KD-----HLEPHALFGYGFTAYQVGDMTLAIEQ-LEALKALDPDFSSLYPYLAKALEAEN 251 Query: 275 KKRKAEVILEKIWKV-----------------NPHPEIANIYTHLLSENTVGKLKRALRL 317 + +A IL+ V HP+ +Y + L+ L Sbjct: 252 RLEEAMDILKDGMSVDEYNEELYIMAGKLSFKRQHPDEGELYLRKVIALNPSNLEAVQTL 311 Query: 318 EEINKE 323 K Sbjct: 312 AAYLKH 317 >gi|255601698|ref|XP_002537729.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] gi|223515289|gb|EEF24654.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] Length = 421 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 78/261 (29%), Gaps = 45/261 (17%) Query: 110 VSQQHTFHNEYL------VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + L L Q A E+ A I T + Sbjct: 130 ARARANLKDPGLKTLVGIALLQTGQTAEGEKLVTEARTAHPENSLIQGT-------IARY 182 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WN 222 + A A+ PDA ++ ++ Y A + +A+ Q+ K + Sbjct: 183 YLLSAQTDRAIETLQAAIKAKPDAS-LSRLLIAAYAGAGKADQALGVAQQQAKESPAKAE 241 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + A L+ D+ + +LK A + A+ I + + KA + Sbjct: 242 SWWLLGRTALQLQQLDQAEPALQ-----NALKQDPAFQPAQLDLAQVYIRRKQPEKAAAV 296 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL---RLEEINKESVESLVI------VSK 333 + + + N + + LK ++ N ++ES ++ ++ Sbjct: 297 YKAVLQKN--------------NDAIAALKGMTVVFAMQGANPSAIESQLLSLSKSDSAR 342 Query: 334 IALEMGSIDQAHAKAMLAMKI 354 L G + A ++ Sbjct: 343 AVL--GEFYLRRQQFEDADRL 361 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 68/229 (29%), Gaps = 13/229 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + + A L+ + + + + DL A Y + +D + Sbjct: 51 AGKLDEAEAILQEVYNESHNESVGALIGMIRYA--RNDLKGAAEYLSSNVDPEVASDSAM 108 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A+ + + + + + + + N L + G E Sbjct: 109 TALAATQLRLSQPEKLLEIFDARAR----ANLKDPGLKTLVGIALLQTGQTAEGEKLVTE 164 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTHLLSENT 307 + + + A+ + + +A L+ K P + Y Sbjct: 165 ARTAHPENSLIQGTIARYYLLSAQTDRAIETLQAAIKAKPDASLSRLLIAAYAGA--GKA 222 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L A + + + ES ++ + AL++ +DQA A+K P Sbjct: 223 DQALGVAQQQAKESPAKAESWWLLGRTALQLQQLDQAEPALQNALKQDP 271 >gi|254428325|ref|ZP_05042032.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] gi|196194494|gb|EDX89453.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] Length = 566 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 62/219 (28%), Gaps = 38/219 (17%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMM-------LQIPATREFAVYSLYFESCRI--- 167 ++L Q A + + A + + ++ A R ++ + Sbjct: 314 RPDDIHLYLAQAAEQKMDTDSAIDHYLKVGGPQAIRARVQAARLLYQQGNAGQAHALMQD 373 Query: 168 -----------------------GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 GD A AL PD ++ + E Sbjct: 374 LAQQQPELQDSLTITEAEMRSSNGDPQGAIALINDALRDQPDNTE----LLYSRAMTAEK 429 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM-IASYHDAIESLKLCDNSIMAS 263 + L + K N + A L A ++ D +Y +L+L + Sbjct: 430 VGDLAQLEKDLKRIITLNPDDASALNALGYTLGNRTDRLDEAYQYVSRALELRPDDPAIL 489 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 L + + A L + ++ P PE+A Y + Sbjct: 490 DSMGWVLYQRGEPEAARDYLRRAYEKFPDPEVAAHYGEV 528 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 84/276 (30%), Gaps = 45/276 (16%) Query: 86 KALYTGLMS-IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + L L++ +AA L + Y + + ++ Q A + L Sbjct: 44 ETLSDLLVAEVAAQRQSLGVTLGYYSRAAESTRDPAVI----SQAARLAHYLEDPQQALA 99 Query: 145 M----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 M + P + + ++ E R+G+ ++A R+ + L + Sbjct: 100 MSELWLDTTPDSEDALQVAILSE-IRLGNTSAATRHLDQLLS---AHGEDALGRLVNQAR 155 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + + + + + A L AR+L + + +LKL Sbjct: 156 GLDEQGNLQLVEALAQLTDSYPDQ-APLWYARALWLEHEKQPEPALDATERTLKLMPRHE 214 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 A + A+ L + +KA L+ +L Sbjct: 215 DALLLKAQLLYETGEPQKA-------------------------------LRHLKKLVRK 243 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + ++ L G +++A + + + P Sbjct: 244 YPQARRPRIAYVRMLLATGQLEEAGEQLTIMAEQNP 279 >gi|195489044|ref|XP_002092570.1| GE14267 [Drosophila yakuba] gi|194178671|gb|EDW92282.1| GE14267 [Drosophila yakuba] Length = 940 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 89/275 (32%), Gaps = 32/275 (11%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 L+ + A +L+ A+ + D A Y L I P P Sbjct: 103 LSSSRAQDADALFIRVLRKQRRNILALIGRACLAYNRQDYIGALGYFKSVLMIQPQGP-- 160 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V V R + L + + + A E+N ++ +L ++ + Sbjct: 161 ----VDVRVGIGHCFRMMGELEKARMSFQMALEYNAQCQNAMLGLALIKLNQREEQTYQE 216 Query: 248 ------DAIESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKVNPHPEIAN 297 A + K + + A + A L E N Sbjct: 217 GKLLLAAAFDLNKHNPDVLS---ILASLYYLDGNHKMVWCLAGNALRSTDSKQM--ESLN 271 Query: 298 IYTHLLSENTVGKLKRALRLEEINKE-SVESLVI----VSKIALEMGSIDQAHAKAMLAM 352 + S + G+ + A + ++ + + E V+ ++++ L G + +A A + Sbjct: 272 YFQIAKSYHATGQFESAKKFYVLSVKVAPEGYVLPYVGMAQMYLNEGELHRAKACLEAFL 331 Query: 353 KIAPRKEIFL-LLAQI--EQANSHNTDKILYWTQS 384 K P + + + LLA+I E+ + +K + Sbjct: 332 KYEPDEPVVMGLLAKIYLEERSPGQIEKAIEMLVK 366 >gi|32475697|ref|NP_868691.1| hypothetical protein RB9073 [Rhodopirellula baltica SH 1] gi|32446239|emb|CAD76068.1| conserved hypothetical protein containing TPR domain [Rhodopirellula baltica SH 1] Length = 1041 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 27/268 (10%), Positives = 80/268 (29%), Gaps = 39/268 (14%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ---I 149 M+I + + P A +A+ + E ++ ++ Sbjct: 118 MAIGSADAPSADLFEK-----------------TGHAYMAQGRTFDTIELMKRCVRLHPD 160 Query: 150 PATREFAVYSLYF-ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 A R ++ L ++ + + + + +++ + + +A+ Sbjct: 161 DAGRRVSLIGLMISQALERDAVVHLRYLIQRGQAGISELVIASDSS-RPQADEQMCKQAL 219 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + R A R E ++ + H + + A + Sbjct: 220 KLNPSDLRPQYAMTRFDAYNH--RWSEVLEQLKPVVDRH---------PDFVPAWAFLTR 268 Query: 269 SLISQNKKRKAEVI----LEKIWKVNPHPEIAN-IYTHLLSENTVGKLKRALRLEEINKE 323 + + +N E I ++ +P IA ++ + ++ + ++ Sbjct: 269 AAVEENDIETLERITNRDFADEYESHPQVWIARGVWADQNGDTSLA-VASFAEAVRLDPN 327 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+L ++ G ++ + A+ A Sbjct: 328 HHEALTKLTTALAASGDLELSQRAAVRA 355 >gi|113478271|ref|YP_724332.1| hypothetical protein Tery_4945 [Trichodesmium erythraeum IMS101] gi|110169319|gb|ABG53859.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 750 Score = 43.4 bits (101), Expect = 0.091, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 7/135 (5%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LI ++ +G + + L L N A + A L +Q K +A + + Sbjct: 17 TLIQQAELYYTQGQFSEAMGCCRQVLTLQPNWAPAYVTLANILQAQGKVSEAISVYYRAI 76 Query: 288 KVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + N P+++ Y +L + + ++ E + ++K+ +G D Sbjct: 77 EFN--PDLSQAYINLGTMFYRQGKLEEAIANYYKAIQLQPEMAAAYWNLAKVWEHLGKSD 134 Query: 343 QAHAKAMLAMKIAPR 357 QA A A+++ P Sbjct: 135 QAIASQQKALELNPS 149 >gi|262304995|gb|ACY45090.1| acetylglucosaminyl-transferase [Hadrurus arizonensis] Length = 288 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 6/168 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A ++ + H + L L I + A L + A +L Sbjct: 39 AEDCYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPEFAAAHSNLAS 96 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + G LN A + +A+ ISP + + A+ + + + Sbjct: 97 VLQQQGKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAF- 155 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + D G++ + +LKL + A A L Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 11/158 (6%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL + P + A + E+ A + + Sbjct: 46 ALRLCPTHADSLNNLANIKREQGFIEEATRLYLKALDVFPEF----AAAHSNLASVLQQQ 101 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 G + + E++++ A +L + A + ++NP H Sbjct: 102 GKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSN 161 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A+I H S N ++ ++ + ++ ++ Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197 >gi|256838989|ref|ZP_05544499.1| TPR-domain-containing protein [Parabacteroides sp. D13] gi|298374536|ref|ZP_06984494.1| TPR-domain containing protein [Bacteroides sp. 3_1_19] gi|256739908|gb|EEU53232.1| TPR-domain-containing protein [Parabacteroides sp. D13] gi|298268904|gb|EFI10559.1| TPR-domain containing protein [Bacteroides sp. 3_1_19] Length = 999 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 21/206 (10%) Query: 93 MSIAAHNIPLARKMHSYV--SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MML 147 ++ A ++ A+++ S V S F E + +I ++ Y A E + + Sbjct: 774 IAFAKKDLEEAKRLFSLVLESGDTKFREESWAR--KAEIEYLDKDYAAAMESFKHLQAVA 831 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL---DISPDA-PWVTEAVVQQYVLAKE 203 + P +E A L + G A A L +SP+ + Y+ K+ Sbjct: 832 ENPENKEAAKLGLMRCAELTGQPQEALLAANDLLKEPKLSPEIMSEARYVRAKAYISLKQ 891 Query: 204 WSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLK-----LCD 257 ++A+ L + K+ + + A LL +N D + + IE+ L Sbjct: 892 ENKALADLKEISKDTRTIHGAEAKYLLAQLYYDNKDDKNAETVLMNFIENGTPHQYWLAR 951 Query: 258 NSIMASICAAKSLISQNKKRKAEVIL 283 I A I Q +A L Sbjct: 952 GFI----LLADIYIRQGDDFQARQYL 973 >gi|237755427|ref|ZP_04584053.1| putative TPR repeat-containing protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237692427|gb|EEP61409.1| putative TPR repeat-containing protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 329 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 29/226 (12%) Query: 158 YSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-----AIT 209 Y L ++ + A +A+ + P+ P V + V + ++ AI Sbjct: 8 YHLLNKAIYHYENENFEMAITLLDEAILLDPEIPEVH--YWRGKVATHDLNQESLEVAIV 65 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L++ + ++ A R KG+ + D ++++L A A+ Sbjct: 66 ELSEAIRLKPDY----ADAYFERGKVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQI 121 Query: 270 LISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEIN 321 + KA LEK+ H E + I+ + +++ + E N Sbjct: 122 ELISGNDEKAMKYLEKV----SHQEGDDRYYYSLGKIFYNAGKYQLA--IEQFNKTIEKN 175 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQ 366 K V++ V + +G+ +A A+ + P + + + +A+ Sbjct: 176 KYFVDAYVYKAHALANLGNYQEAIENLKKAIILVPEEISYFIDMAK 221 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 + + ++ K+ ++ G ++A A+++ P+ KE + LLAQIE + ++ Sbjct: 72 RLKPDYADAYFERGKVYIQKGEFEEAKKDLEKAIQLNPKLKEAYSLLAQIELISGNDEKA 131 Query: 378 ILY 380 + Y Sbjct: 132 MKY 134 >gi|255556376|ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus communis] gi|223541537|gb|EEF43086.1| pre-mRNA splicing factor, putative [Ricinus communis] Length = 648 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 44/268 (16%), Positives = 80/268 (29%), Gaps = 20/268 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY---LLEVQIALAERQYNIAHEKLEMMLQ-IPATR 153 NI AR++ + + NEY+ LLE + +Y A + P + Sbjct: 273 GNIKKARQLLAKGIK-FCGGNEYIYQTLALLEAKA----NRYEQARYLFRQATKCNPKSC 327 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + E + +A+ KA+ SP + A L Sbjct: 328 ASWLAWAQVEVQQEN-NLTARELFQKAVQASPKNRFAWHVWGVFEANIGNIEMARKLL-- 384 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K N +LL + +L + + +L I + Sbjct: 385 --KIGHTLNPRDPVLLQSLALLEYKHSTANLARVLFRRASELDPKHQPVWIAWGWMEWKE 442 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENTVGKLKRALRLEE----INKESVES 327 A + ++ ++ E A E VG L A RL IN +S + Sbjct: 443 GNISAARELYQRALSIDSSSESAAKCLQAWGVLEQRVGNLSLARRLFRSSLNINSQSYIT 502 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + ++ + G+ +A L + Sbjct: 503 WMTWAQFEEDQGNSVRAEEIRNLYFQQR 530 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 70/213 (32%), Gaps = 11/213 (5%) Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W AV++ + RA + ++ ++ +G++ + Sbjct: 228 WQCWAVLENKM--GNIRRARELFDAA----TVADKRHIAAWHGWAVLELKQGNIKKARQL 281 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANIYTHLLSE 305 + +K C + A N+ +A + + K NP +A + E Sbjct: 282 LAKGIKFCGGNEYIYQTLALLEAKANRYEQARYLFRQATKCNPKSCASWLAWAQVEVQQE 341 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 N + + + + + ++ + + +G+I+ A + + PR + L Sbjct: 342 NNLTARELFQKAVQASPKNRFAWHVWGVFEANIGNIEMARKLLKIGHTLNPRDPVLLQSL 401 Query: 366 QIEQANSHNTDKILYWTQSA--LHAMPDPLWIS 396 + + + + A L P+WI+ Sbjct: 402 ALLEYKHSTANLARVLFRRASELDPKHQPVWIA 434 >gi|167561753|ref|ZP_02354669.1| TPR domain protein [Burkholderia oklahomensis EO147] Length = 280 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 6/138 (4%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL A Q + +L P L S GD ++A + T+ Sbjct: 83 PDTILLRADALRATDQAAASTVAYRQLLNTP-LAARGYRGLGLLSGASGDFDAASQALTQ 141 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++P + + + + + A L + E ++N +L +L Sbjct: 142 ATALAPTDSLTLSDLAYARMRSGDVAGARVPLMKA----AELDQNNPKILSNLALFLLAT 197 Query: 240 GDMIASYHDAIESLKLCD 257 G + + LKL Sbjct: 198 GQTRDALGL-MNQLKLAP 214 >gi|308810889|ref|XP_003082753.1| pentatricopeptide (ISS) [Ostreococcus tauri] gi|116061222|emb|CAL56610.1| pentatricopeptide (ISS) [Ostreococcus tauri] Length = 923 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 70/228 (30%), Gaps = 23/228 (10%) Query: 133 ERQYNIAHEKLEM------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + +A E ++ + P FA +L + + G+ +A+ +A Sbjct: 124 AKDWAVAREAFDLRRTEAGLAPDP----FAYSALVSSAAKCGNYVAAREAFEEANAAHAV 179 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 V A + ++ A L + K A R+ + + + Sbjct: 180 DTVVYNAFIDACASRGDYEGARATLERMKTTANVKPNIRSYNGVISASTRRKHFSGALAA 239 Query: 247 HDAIESLKLCDNSIM-ASICAAKSLISQNKKRKAEVILEKIWKV-------NPH--PEIA 296 + ++ KL I ++ AA + +E + + N H + Sbjct: 240 WEELQLAKLAPTIITYGAMLAAGAATDDVDVAWSEELFADALQSGACGRAGNDHMVSSLI 299 Query: 297 NIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + Y + + L+RA + + E S +K + Sbjct: 300 SAYARGVVRKQIDKKTALERAEAIVRLLSEDAASDDRRAKASPNARVW 347 >gi|325203945|gb|ADY99398.1| tetratricopeptide repeat protein [Neisseria meningitidis M01-240355] Length = 612 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 104/315 (33%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + ++ A ++ L A + A+ + Sbjct: 301 NPNAD----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRD 356 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 357 YAKVRQWLKK-VSAP 370 >gi|302770493|ref|XP_002968665.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii] gi|300163170|gb|EFJ29781.1| hypothetical protein SELMODRAFT_440495 [Selaginella moellendorffii] Length = 824 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 35/189 (18%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + +A + P + + E+ A L + ++ A + Sbjct: 348 ACEHYREAAILHPPHYRALKLLGSGLYGVGEYRAAEKALGEAIFLKSDY--ADAHCDLGS 405 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 L GD + + +++ + + + A L + ++A Sbjct: 406 VLHAL--GDDERAIVEFQKAIDIKPDHMDALYNLGGLLRDTGRFQRA------------- 450 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 A +Y+ +L +N ++ + + L G ++A A Sbjct: 451 ---AEVYSRVL---------------SLNPSHWQAQLNRAVSLLGAGDTEEARKALKEAF 492 Query: 353 KIAPRKEIF 361 K+ R E++ Sbjct: 493 KMTNRVELY 501 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 94/302 (31%), Gaps = 35/302 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + R+ + + + + + L L Q A A R + A + M Sbjct: 212 AGGDEVVRRTMHDLGTESSVYQKALGDL--RQKADASRTQDEAFDAHMAM---------- 259 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPD----APWVTEAVVQQYVLAKEWSRAITFLN 212 SL+ A +A ++ P + +++ A Sbjct: 260 GRSLFDHKF----YEEALICFKRATELRPTDVRPHFRTGNTLYSL----EKFLEAREAYE 311 Query: 213 QKKKNAKEWNRNRAIL----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 A N L + + +G ++ + E+ L A Sbjct: 312 LALDAANTGNPQWTNLVPQIHVNLGVALEGEGMLLNACEHYREAAILHPPHYRALKLLGS 371 Query: 269 SLISQNKKRKAEVIL-EKIWK----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 L + R AE L E I+ + H ++ ++ H L ++ ++ + +I + Sbjct: 372 GLYGVGEYRAAEKALGEAIFLKSDYADAHCDLGSV-LHALGDDERAIVE-FQKAIDIKPD 429 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQ 383 +++L + + + G +A + + P L + + +T++ + Sbjct: 430 HMDALYNLGGLLRDTGRFQRAAEVYSRVLSLNPSHWQAQLNRAVSLLGAGDTEEARKALK 489 Query: 384 SA 385 A Sbjct: 490 EA 491 >gi|170767254|ref|ZP_02901707.1| tetratricopeptide repeat protein [Escherichia albertii TW07627] gi|170123588|gb|EDS92519.1| tetratricopeptide repeat protein [Escherichia albertii TW07627] Length = 1068 Score = 43.4 bits (101), Expect = 0.092, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 36/120 (30%), Gaps = 3/120 (2%) Query: 101 PLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + + H + L+ + QY A E + ++ Sbjct: 488 QAAAYASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGY 547 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y L + R G++ + + ++L P V +L+ A + ++ Sbjct: 548 YGLARLAVRDGNVEAGLDFCQQSLRACPTNQEVLCLHNLLLLLSGRRDNARLQREKLLRD 607 >gi|315042610|ref|XP_003170681.1| pre-mRNA-splicing factor clf1 [Arthroderma gypseum CBS 118893] gi|311344470|gb|EFR03673.1| pre-mRNA-splicing factor clf1 [Arthroderma gypseum CBS 118893] Length = 678 Score = 43.4 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 80/242 (33%), Gaps = 24/242 (9%) Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183 ++Y A + L P ++ A+ S Y + GD + + + + Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237 +P + + + + + R + + + W R + + E Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRVRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376 Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D+ + E LKL + A+ I Q A L + + P Sbjct: 377 ENEDVERARQIYTECLKLIPHKKFTFAKLWLMKAQFEIRQLDLVLARKTLGQAIGMCPKD 436 Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ Y ++ E + + K + + N ES + +++ + +++A A L Sbjct: 437 KLFRGYINIERKLFEFSRCR-KLFEKQIQWNPSQSESWIKFAELERGLDDVERARAIYEL 495 Query: 351 AM 352 + Sbjct: 496 GI 497 >gi|291569299|dbj|BAI91571.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 530 Score = 43.4 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 22/277 (7%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMML 147 G + + A + + + + LV +L+ Q+ Q+ A + + Sbjct: 246 QGTALANSGKLSEAAESYQKALEL----DPNLVEILQPLGQVLTQLNQWEAAVDIFQKAT 301 Query: 148 QIPATREFAVYSLYFESCRIGDLN-SAQRYATKALDISPDAP----WVTEAVVQQYVLAK 202 Q+ + Y ++ D A +A ++ P + + +A+ + Y Sbjct: 302 QVDP-NSASFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLY---- 356 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 WS AI + N+ + + D + + +S + NS + Sbjct: 357 HWSEAIATYQKALYLNPP-NQAEIQTHLQEVQDKQRHLDEEIAAYS--DSHEFHPNSSES 413 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEE 319 A+ L S+ K A + + +NP +A+ YT + + + E Sbjct: 414 YEKFAQFLRSKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAE 473 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +N S + + +E G +D+A A ++ I P Sbjct: 474 LNPYSPHVQYHLGEALVEEGRLDEAIAHFKQSITIDP 510 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 85/255 (33%), Gaps = 16/255 (6%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y +L L ++ A + + + +E L L + ++ ++ Sbjct: 175 YLSLGQTLEAL--GETEEAIASYRRSYELNPSLSEALPKLQT--VLESQGRWEELATLYR 230 Query: 145 MM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P + Y + +A+ Y KAL++ P+ + + + Q + Sbjct: 231 RCCIVDPNSATSHKYQGTALANSGKLSEAAESY-QKALELDPNLVEILQPLGQVLTQLNQ 289 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 W A+ + + + N + ++L D+ ++ + + +L S Sbjct: 290 WEAAVDIFQKATQ--VDPNSASFYHQLGQALAKCDR--LLEALAAYKRASELHPTSTPVL 345 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLE 318 ++L +A +K +NP P A I THL + + Sbjct: 346 FDLGQALTKLYHWSEAIATYQKALYLNP-PNQAEIQTHLQEVQDKQRHLDEEIAAYSDSH 404 Query: 319 EINKESVESLVIVSK 333 E + S ES ++ Sbjct: 405 EFHPNSSESYEKFAQ 419 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 60/202 (29%), Gaps = 35/202 (17%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + R G L+ A +A+ SP + W + + + AI + A E Sbjct: 10 NQLLRKGQLDEAIASYNQAIAESPQSAWYYHNLGEALSQQGKIDEAI----AAYRQATEL 65 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N N A +G++ + ++++L + A LI + + +A Sbjct: 66 NPNSAWSYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLALVLIKEGRLEEAVS 125 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +L+K E+ + E + K + Sbjct: 126 LLQKA-------------------------------IELKADDAELYHSLGKAYQQQQQY 154 Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363 +A +++ P L Sbjct: 155 SEAVTAYRQGLELNPYWSDCYL 176 >gi|302340235|ref|YP_003805441.1| hypothetical protein Spirs_3761 [Spirochaeta smaragdinae DSM 11293] gi|301637420|gb|ADK82847.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM 11293] Length = 860 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 82/264 (31%), Gaps = 18/264 (6%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 + + + ++ +E +IA + ++ A L +++ Y R Sbjct: 426 RAIAAIRRYAPDDPEALAIEGKIAFEDGNWDRAEALLRPLVERGCGDSAVYYLCALLDLR 485 Query: 167 IGDLNSAQRYATKALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 DL SA AL + PD P A + A L ++N WN Sbjct: 486 RNDLASAATLTDAALALEPDYPLYRFKRAEIGYLSGKGNEEEARRALELDRENGWNWN-- 543 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L D+ + + +L I +++L + A ++ Sbjct: 544 ------LLGLILLDERKDAEALDLFEHAKQLLPEEPEPIINYSEALFRLRGCKAAVSCID 597 Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + P P++ N ++LS + A R E N E+ + L Sbjct: 598 DVLTRLPSPQLLNRKGNILSTSHRYDEAADAYLAAARDEPANPLWRENG---AAALLAAD 654 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363 + +A ++ P + L Sbjct: 655 RVPEAERILARLLEEEPTALRYRL 678 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 60/191 (31%), Gaps = 17/191 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G +SA + + L+ PD L + L+ + Sbjct: 294 LSLGFYDSALLHIERILEGDPDMEEALREKTAVLYLQGRIDELLELLDTMEAQKPLP--- 350 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + LL R + G + + + + ++ AA S K +A + Sbjct: 351 -SALLNLRGNALSSLGRFDQAADLYRRAFEGDPSVSQFALNAAASFERSGKNTEALAMYR 409 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQ 343 K L + +L RA + + E+L I KIA E G+ D+ Sbjct: 410 KA------------AGELYRQQAWDELDRAIAAIRRYAPDDPEALAIEGKIAFEDGNWDR 457 Query: 344 AHAKAMLAMKI 354 A A ++ Sbjct: 458 AEALLRPLVER 468 >gi|295678098|ref|YP_003606622.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. CCGE1002] gi|295437941|gb|ADG17111.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. CCGE1002] Length = 1634 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 7/134 (5%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +A + G + A + L +++ A A +L + +AE + K Sbjct: 807 LALACALQRAGKLTEFASAAERAATLLPDTLSAQTLLADALKITRQFEQAERHCREALKR 866 Query: 290 NP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +P H + + + + R + ++ + + LE G +A Sbjct: 867 HPESAGLHHSLGVVLQSMGRH--ADSIACFRRAVALTPDNALAYDALGVALLEYGESKEA 924 Query: 345 HAKAMLAMKIAPRK 358 + A+++AP + Sbjct: 925 ESALRRALELAPTQ 938 >gi|262304997|gb|ACY45091.1| acetylglucosaminyl-transferase [Heterometrus spinifer] Length = 290 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 6/168 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A ++ + H + L L I + A L + A +L Sbjct: 39 AEDCYNTALRLCPTHADSLNNL--ANIKREQGFIEEATRLYLKALDVFPEFAAAHSNLAS 96 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + G LN A + +A+ ISP + + A+ + + + Sbjct: 97 VLQQQGKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAF- 155 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + D G++ + +LKL + A A L Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 11/158 (6%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL + P + A + E+ A + + Sbjct: 46 ALRLCPTHADSLNNLANIKREQGFIEEATRLYLKALDVFPEF----AAAHSNLASVLQQQ 101 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 G + + E++++ A +L + A + ++NP H Sbjct: 102 GKLNDALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPAFADAHSN 161 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A+I H S N ++ ++ + ++ ++ Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALKLKPDFPDAYCNLA 197 >gi|158424855|ref|YP_001526147.1| TPR repeat-containing protein [Azorhizobium caulinodans ORS 571] gi|158331744|dbj|BAF89229.1| TPR repeat protein [Azorhizobium caulinodans ORS 571] Length = 471 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 9/138 (6%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +A + + +G + A+ + L+ + + A +A + R+A LE+ + Sbjct: 26 LAEASAHEQEGRLDAAEQIVAQVLEAKPDYVPALHQSAILAHKAKRPREALARLERAIAL 85 Query: 290 NP-----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 P H I +Y + + +RA+ L + + + I + ID Sbjct: 86 LPTEPIFHRNICELYRSQGRLDEALVHGRRAVELA---PDDAGAHYNLGVIYYDRMEIDA 142 Query: 344 AHAKAMLAMKIAPRKEIF 361 A A A A+ + P Sbjct: 143 AIACARRALALDPTMAAA 160 >gi|254247179|ref|ZP_04940500.1| TPR repeat [Burkholderia cenocepacia PC184] gi|124871955|gb|EAY63671.1| TPR repeat [Burkholderia cenocepacia PC184] Length = 499 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 85/223 (38%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + D A +A++ V + + L KN + NR A L IAR Sbjct: 57 ARELARASGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 111 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D D + ++L+L + + A++ L +A I V + Sbjct: 112 QQLAVDDKD--GAAQSLKQALQLRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 165 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D+A Sbjct: 166 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDEATGY 225 Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LAQI +++ + W Sbjct: 226 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 267 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 10/142 (7%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 +L D +++ + + +S AS A L+ K A+ +L + Sbjct: 5 ATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKPADAQPMLARELA 61 Query: 289 VN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 P +A + + VG L + + + E+ + +++ L + D Sbjct: 62 RASGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKD 120 Query: 343 QAHAKAMLAMKIAPRKEIFLLL 364 A A+++ P L+ Sbjct: 121 GAAQSLKQALQLRPDYLPAALM 142 Score = 36.8 bits (84), Expect = 8.8, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 70/190 (36%), Gaps = 10/190 (5%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +PD+ ++ VLA + + A L ++ A R AIL + L D + Sbjct: 29 APDSNRASQVDAALLVLAGKPADAQPMLARELARASGDTRGPAILALQALL--VRGPDRV 86 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + LK N A + A+ ++ + K A L++ ++ P+ L Sbjct: 87 GGLAVLKDMLKNDMNRPEAQLAIARQQLAVDDKDGAAQSLKQALQLR--PDYLPAALMLS 144 Query: 304 SENTVGK---LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK---AMLAMKIAPR 357 + + + + N +S ++ + +S++ L +D A + P Sbjct: 145 QMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPT 204 Query: 358 KEIFLLLAQI 367 + L L +I Sbjct: 205 PLMALALIKI 214 >gi|154412417|ref|XP_001579241.1| TPR Domain containing protein [Trichomonas vaginalis G3] gi|121913446|gb|EAY18255.1| TPR Domain containing protein [Trichomonas vaginalis G3] Length = 465 Score = 43.4 bits (101), Expect = 0.094, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 11/154 (7%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GD NSA A+K L +P + A V + + + + + Sbjct: 170 EGDANSAFESASKLLKENPSSDKAITAFVSACMALGKSHDLFVVAQRLLETTPDSY---- 225 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + A A G A+ +LK + A + A + + N R A ++ Sbjct: 226 LASFAAGCHVAMSGRSDAARSLLWFTLKRMPSFAPAWLAYAMTYKNDNDNRMALSVIMTA 285 Query: 287 WKVNP-----HPEIANIYTHLLSENTVGKLKRAL 315 + P H + Y + S + L Sbjct: 286 ARAFPKLNLLH--LWAAYFCVQSNDFALALAHLQ 317 >gi|304315336|ref|YP_003850483.1| tetratricopeptide repeat domain-containing protein [Methanothermobacter marburgensis str. Marburg] gi|302588795|gb|ADL59170.1| tetratricopeptide repeat domain-containing protein [Methanothermobacter marburgensis str. Marburg] Length = 207 Score = 43.4 bits (101), Expect = 0.095, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 13/160 (8%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +Y A +++ F + + + + A +Y KAL I+P+ Sbjct: 36 EYEKAINVYRLLISKTEKDLFNIGFCFTQ---NKEYQKALKYYDKALKINPEYAEAWNNK 92 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA---RSLENADKGDMIASYHDAIE 251 K++ +A+ N+ + E L+ A + + G + + Sbjct: 93 GIILKELKKYKKALKCYNKALEINPE-------LIEAWNNKGTTLQELGKYEEALECYNK 145 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L++ SI +L K +KA +K K+NP Sbjct: 146 ALEINPKSIETLTYKGITLSKIGKYKKALKCFDKALKINP 185 >gi|254445162|ref|ZP_05058638.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198259470|gb|EDY83778.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 434 Score = 43.4 bits (101), Expect = 0.095, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 1/134 (0%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 LA K+ + + + E + ++ ++AL E + A L M+++ A+ SL Sbjct: 299 LAAKLSETMGDELSPRQELDLLNVKARLALREDDQDGAASYLSMIVKRDPLNGGALLSLS 358 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-NQKKKNAKE 220 GDL A+ YA A I A ++ Q V +++ A FL + ++ + K+ Sbjct: 359 DLEKSRGDLAKAEYYAESATKIDAFAHRAYLSLAQLNVGKRDYDSAAKFLRSAQQIDPKD 418 Query: 221 WNRNRAILLIARSL 234 + + + + +L Sbjct: 419 YVADYLLRIEQAAL 432 >gi|195441399|ref|XP_002068497.1| GK20387 [Drosophila willistoni] gi|194164582|gb|EDW79483.1| GK20387 [Drosophila willistoni] Length = 1185 Score = 43.4 bits (101), Expect = 0.095, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 92/296 (31%), Gaps = 25/296 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMM 146 L ++ + A M Y T N V + L A E Sbjct: 167 LGKACIAFNRKDYRGA--MAFYKKALRTNPNCPANVRIGMAHCFLKMGNPVKAKLAFERA 224 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA----K 202 LQ+ A+ L + S + + L + V+ K Sbjct: 225 LQLDQQCVGALIGLAVLKLNQLEPES-NKLGVQMLSKAYTIDNANPMVLNHLANHFFFKK 283 Query: 203 EWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD- 257 ++ + A+ + E RA + + D ++ +S ++ Sbjct: 284 DYQKVHHLALHAF-----HNTENEAMRAESCYQLARSFHAQSDYDQAFQYYYQSTQIAPA 338 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLK 312 N ++ + I + A EK+ K+ P + ++Y H S+ K Sbjct: 339 NFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQPGNYETMKILGSLYAHSNSQTKRDMAK 398 Query: 313 -RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ E E +E+ + +++I LE + + A I K + + A+I Sbjct: 399 THLKKVTEQFPEDIEAWIELAQI-LEQNDLQASLNAYGTASSILRDKAKYEIPAEI 453 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 5/165 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISP 185 + A+ Y+ A + QI Y L GD +A + K L I P Sbjct: 313 ARSFHAQSDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAAQCFEKVLKIQP 372 Query: 186 DAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + Y + R + + KK + A + +A+ LE D + Sbjct: 373 GNYETMKILGSLYAHSNSQTKRDMAKTHLKKVTEQFPEDIEAWIELAQILEQNDLQASLN 432 Query: 245 SYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVILEKI 286 +Y A L+ I A I A + A+ LE Sbjct: 433 AYGTASSILRDKAKYEIPAEIQNNVASLHYRLGNLKMAKDTLESA 477 >gi|319792454|ref|YP_004154094.1| hypothetical protein [Variovorax paradoxus EPS] gi|315594917|gb|ADU35983.1| tetratricopeptide repeat protein [Variovorax paradoxus EPS] Length = 392 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 6/157 (3%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +Y A E +L RE A ++L + R G L+ A+ K L+ + Sbjct: 85 GEYQRAVRVHEHLLGRGDLSRTDRERAQHALAQDFLRAGLLDRAEAALQK-LEGTRYENE 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +++ Y ++EW++A + + + + RA L ++ E GD+ A+ Sbjct: 144 ARLSLLAIYERSREWAQAADVAQKLDESDQASYATRRAHHLCEQATERVAAGDLPAAAKL 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++++L + +I A + A L Sbjct: 204 LAQAVELAPQAPRPAIDTANLQLRNGNAAAAFDTLVA 240 >gi|307197899|gb|EFN78998.1| Transmembrane and TPR repeat-containing protein CG4050 [Harpegnathos saltator] Length = 982 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 88/240 (36%), Gaps = 27/240 (11%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ P+ Sbjct: 578 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 633 Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++Q+ A+ A L + + K+ N R + + D D ++ Sbjct: 634 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 689 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299 ++ L ++ A A L + + +A L + V HP+ + +IY Sbjct: 690 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 747 Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ + R R+ +++ +++ L + + +E G + A A +AP++ Sbjct: 748 INNIKDLDAAENCYR--RILQLDPNNIQGLHNLCVVMVERGKLGLALQCLERAAALAPQQ 805 >gi|322421231|ref|YP_004200454.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18] gi|320127618|gb|ADW15178.1| Tetratricopeptide repeat [Geobacter sp. M18] Length = 636 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 4/188 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + Y ++ L + + ++ + A + +++ A A L Sbjct: 389 QALEQYQELAKMNPSDAATQLKLARALVNTKELDSAITAYQGAIKLDAESPEAHRELANL 448 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + ++ A + L + D A+ YV K + L K E Sbjct: 449 LRKRNMMDEAANQYQEVLRLKKDDQDARTALTAIYVKNKNYDS----LANLLKEGVELAP 504 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + A L + + A+ + E++ L + A + + + +A+ L Sbjct: 505 SDANAHYKLGLVYEFQKNYPAATAEYKEAVNLKPDHAKALNAMGRVQMKDGRIAEAKESL 564 Query: 284 EKIWKVNP 291 E K +P Sbjct: 565 EAARKADP 572 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 68/243 (27%), Gaps = 22/243 (9%) Query: 125 LEVQIALAERQYNIAHEKLEM-MLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L+ + A ++ + P + + + +A + Sbjct: 69 LKALAFERSGNIDAAIQEYRETLALDPEFYPASGNLGILHQ-QKGASEEAAVELSQ---G 124 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P + + + AI + E A L + G Sbjct: 125 LKTGNPRYHGGLARILAEKQLHQLAIFHFTEALAAFPE----DASLHTDLAASYDAVGQK 180 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIAN 297 + ++L + + A + L+ + + KA L++ +P H +A Sbjct: 181 QKGEDEYRKALAIQPGNARARLGFGALLLERGETDKAVNELKQAAIADPGSKEVHRLLAE 240 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKAMLAMK 353 Y + + L I + E + +++ +D A ++ L + Sbjct: 241 GYLRKGDQKSADY---ERVLAGITPKVKEGPKVDHMALAEQYRNAKDLDMAISEYRLRLA 297 Query: 354 IAP 356 P Sbjct: 298 EEP 300 >gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group] Length = 818 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 25/101 (24%) Query: 190 VTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 +AV+ A+EW AI + + R RA+ Sbjct: 118 AKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPRRRGRAV--------------HAY 163 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A+++ L + A A +L+ Sbjct: 164 ALKLALDAHPLVPGFL------AGMYAENADVAAATRVLDA 198 >gi|330899757|gb|EGH31176.1| TPR repeat-containing protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 488 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F + LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQDTLVSLLSAELAGQRNRFDIAPDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217 SA A +P A Q A + ++ ++ + + Sbjct: 84 SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143 Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + + +L + ++L GD S +E + I Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + D+A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|330823109|ref|YP_004386412.1| tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans K601] gi|329308481|gb|AEB82896.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans K601] Length = 734 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + ++ L + + + + + +L I A ++ Sbjct: 94 GRKAEALTAFERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCIEPGHVQAQFN 153 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L R A + L + P + ++ A+ +Q Sbjct: 154 LGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVASFDQALALQP 213 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ A L+ R + + ++ D +++L + + L + +A Sbjct: 214 QY----ADALVNRGNARLQRKEHAQAFADLDRAIRLNPDQAQSRQLMGTLLRDSKRHEEA 269 Query: 280 EVILEKIWKVNP 291 ++ W+ NP Sbjct: 270 LQEFQRAWRCNP 281 >gi|218439036|ref|YP_002377365.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp. PCC 7424] gi|218171764|gb|ACK70497.1| MCP methyltransferase, CheR-type with Tpr repeats [Cyanothece sp. PCC 7424] Length = 431 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A + +Q ++ YLL QI A+ + A + + ++ + E A Sbjct: 339 AGTLEKAESLAKLYLKQA--PSDPQAYLLLAQIYQAQGKEQQAEDYFQKVIYLNPNCEEA 396 Query: 157 VYSLYFESCRIGDLNSA 173 + L GD + A Sbjct: 397 LIHLALLKESRGDGSGA 413 >gi|126459224|ref|YP_001055502.1| peptidase M1, membrane alanine aminopeptidase [Pyrobaculum calidifontis JCM 11548] gi|126248945|gb|ABO08036.1| peptidase M1, membrane alanine aminopeptidase [Pyrobaculum calidifontis JCM 11548] Length = 822 Score = 43.4 bits (101), Expect = 0.096, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 7/125 (5%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++E K + ++L+ DN + AAK+L ++E + V Sbjct: 552 QAVEALKKNGSPKAVDALAKALR--DNFWGVASEAAKALGEVGTAEAVAKLIE-AYPVVA 608 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS--IDQAHAKAM 349 HP L + + A L+ + + ES + ++ A +G + A Sbjct: 609 HPRARRAIIEALGNT--RRREAAEFLDRVLHDVGESYYVRAEAARALGKTRWEFAEHSLR 666 Query: 350 LAMKI 354 A++ Sbjct: 667 KALEY 671 >gi|298369471|ref|ZP_06980788.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str. F0314] gi|298282028|gb|EFI23516.1| tetratricopeptide repeat protein [Neisseria sp. oral taxon 014 str. F0314] Length = 389 Score = 43.4 bits (101), Expect = 0.097, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 14/189 (7%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT----REF 155 AR++ + QQ ++ L ++ + + A +L P T RE Sbjct: 57 GRAARELAEVIDQQPQSYDLNLTL---GKLYRQRGENDKAINMHRALLDSPDTVDDKRER 113 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ L G ++ A++ + L + A + ++ Y ++W +AI Sbjct: 114 VLFELAQNYQSAGLVDRAEQIFLELLGGN-MAREARQHLMSIYQQDRDWVKAIEMAQLLS 172 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASY---HDAIESLKLCDNSIMASICAAKSLIS 272 + + + A + K D+ + A+++ K C A++ Sbjct: 173 HDEQTYQFEIAQFYCELAQAALFKSDLETARGNVRKALDANKKC---TRANMILGDIESK 229 Query: 273 QNKKRKAEV 281 Q A Sbjct: 230 QGDFPAAVA 238 >gi|301093702|ref|XP_002997696.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262109945|gb|EEY67997.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1358 Score = 43.4 bits (101), Expect = 0.097, Method: Composition-based stats. Identities = 39/334 (11%), Positives = 82/334 (24%), Gaps = 64/334 (19%) Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVS------QQHTFHNEYLVYLLEVQ 128 D+ L ++ +I AR+ + + + LL Sbjct: 711 WRLASRIDQRDYWLALAGRAMHTLDITAARRAYRSLGDSGMVLGLDRLADIEEKNLLAGH 770 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK-ALDISPDA 187 + + YN A P L A + A A D+ P+ Sbjct: 771 VCMLFGDYNEARRLFLNS-SDPLAALHMQRHLLQ-------WEQALKLADSLARDLVPEL 822 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V ++ E+ A+ R ++E+ + D I Sbjct: 823 SAVYATQLEFR---GEFDAAL----------------RMYEHAVNAIESVSRDDSIQGPE 863 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----------IAN 297 + + KL S+ A+ R+ ++ +I + IA Sbjct: 864 PEV-ADKLRTQSL---AGVARCTFRLGDLRRGVKLVTEIGDSAVFKDCAAILESMKQIAE 919 Query: 298 IYTHLLSENTVGKLKRA----LRLEEINK-----ESVESLVIVSKIALEMGSIDQAHAKA 348 + K + L ++ + ++ G A Sbjct: 920 AAALYEQGGQIEKAAQLFVQMKNLARAAPLMTRVKASKVHAQFARAKEAAGEFASAAEAY 979 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTD--KILY 380 A ++ + Q+E + + Sbjct: 980 ERAGEMDNVVRM-----QLEHLDGAERAFEIVRE 1008 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 43/164 (26%), Gaps = 30/164 (18%) Query: 127 VQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + A ++ A E E M + + + A +A +I Sbjct: 963 ARAKEAAGEFASAAEAYERAGEMDNVVRMQLEHLDG-----------------AERAFEI 1005 Query: 184 SP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENADK 239 + + + A + AI FL K + + + + + + Sbjct: 1006 VRETKSSEGALSAARYCAEAGRYPNAIEFLLLANKEDEAFALAQQHGQVDCFAATLGQEN 1065 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + A L AA+ + KA +L Sbjct: 1066 MAAKRASQVAAHYEGLSPER------AAEFYQAAGNYHKALKLL 1103 >gi|218248390|ref|YP_002373761.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 8801] gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802] gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801] gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 406 Score = 43.4 bits (101), Expect = 0.097, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 44/147 (29%), Gaps = 15/147 (10%) Query: 134 RQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A ++I A L +GD A +A+ I PD Sbjct: 233 GDNQGAITDYTQAIEIKPDDADAYYNRGLA--KYNLGDKQGAIADYNQAIKIKPDYATAY 290 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + AI NQ K ++ A + + N GD + D + Sbjct: 291 NNRGNAKYNLGDKQGAIADYNQAIKIKPDYT--LAYICCGLAKSNL--GDNQGAITDYNQ 346 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRK 278 ++K+ + A + I + +K Sbjct: 347 AIKIKPDY-------ADAYICRGNAKK 366 >gi|222053475|ref|YP_002535837.1| sulfotransferase [Geobacter sp. FRC-32] gi|221562764|gb|ACM18736.1| sulfotransferase [Geobacter sp. FRC-32] Length = 859 Score = 43.4 bits (101), Expect = 0.097, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 84/281 (29%), Gaps = 46/281 (16%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFE 163 M + LV+LL + Q+ A L L T + Sbjct: 196 MRQAFDRGDRGATAALVHLLGAR-----GQHEEAWHLLMDALGDMPDETDLMGL--AAEL 248 Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G A + +AL+ PD W A++ L + A + ++ Sbjct: 249 AQVRGQFGEAAHWLKRALEKEPDNARLWSCLAMLSSRHLGV--NCAREAADTALALTEDT 306 Query: 222 NRNRAILLIARSLENADKGDMIASYHDA-IESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +A +GD A A E+L L A L+ + + +A Sbjct: 307 GGPLRAHALAAHAHVLAEGDQRAEAEGAYREALALAPRFAPALTGLGNLLMQRGRVEEAT 366 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + + + ++ P L+ +L + + E+ V+ ++AL Sbjct: 367 ALYQTLKEIAP-------------------LQGWSQLIQAREVPEETAVLE-QLALAAR- 405 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 ++ +F L A E+ ++ W Sbjct: 406 ----RPSLEGPVQSH---LLFTLAAAWEKKEDYD----RAW 435 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 65/198 (32%), Gaps = 10/198 (5%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A + A + N I+ G + + ++ L S A + Sbjct: 84 GAPQTAIPFLQRAWQGNDRHPIVAARLGACLLAAGHVTEALPVLERAVDLLSGSGGAWLN 143 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 A+ ++ + AE LE + + P P + + + +L R E + +++ Sbjct: 144 LARGYLAVGE---AEKALEALDRAAPLPGKDEHLYRMSRVDALSRLDRQEEAESMMRQAF 200 Query: 326 ESLVIVSKIAL-----EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 + + AL G ++A M A+ P + + LA + + Sbjct: 201 DRGDRGATAALVHLLGARGQHEEAWHLLMDALGDMPDETDLMGLAAELAQVRGQFGEAAH 260 Query: 381 WTQSALHAMPDPL--WIS 396 W + AL PD W Sbjct: 261 WLKRALEKEPDNARLWSC 278 >gi|126452464|ref|YP_001067211.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a] gi|167846787|ref|ZP_02472295.1| tetratricopeptide repeat protein [Burkholderia pseudomallei B7210] gi|242314115|ref|ZP_04813131.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] gi|126226106|gb|ABN89646.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a] gi|242137354|gb|EES23756.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] Length = 614 Score = 43.4 bits (101), Expect = 0.097, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L +L L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSLTLAQMH 312 >gi|21226703|ref|NP_632625.1| hypothetical protein MM_0601 [Methanosarcina mazei Go1] gi|20904990|gb|AAM30297.1| conserved protein [Methanosarcina mazei Go1] Length = 1024 Score = 43.4 bits (101), Expect = 0.098, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 62/176 (35%), Gaps = 10/176 (5%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A +K + I + + A G + + L L ++ Sbjct: 586 GRYKDAFEAFEDARKVSGNGK----ISFSGKGIVFAHCGKWKKAIEEFDSVLILDPENVP 641 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLE 318 AS+ A +LI + KA LEK+ + +++ + + L+ + Sbjct: 642 ASVMKAFALIRLEEFGKAAEFLEKLTLKDCDSDLSLCLLGFAFSKQGDLEKALRAYRKAI 701 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQIEQAN 371 E N +++ + +++I +G+ A + ++ AP ++E+ Sbjct: 702 EANPKNIHARNGLAEICFIIGNSTGALKELEASIAEAPDNAYSRSLKGRVELEEQE 757 >gi|239996055|ref|ZP_04716579.1| CheY-like receiver protein [Alteromonas macleodii ATCC 27126] Length = 511 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 39/264 (14%) Query: 153 REFA-VYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R A + LY GDL A L S W V+ + +W + Sbjct: 137 RLVAEIRKLYARLLFENGDLQRALSIYDDVLTRSDKVLWAQWGKVKCQYASGQWPHCKSH 196 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L+Q ++ ++ L + + D + +K + S+ A+ + Sbjct: 197 LSQMVNSSLARDKAFEWLAS-----ISFEQDSYDQVEKYLNEIKFSELSLPAAKLKTIAY 251 Query: 271 ISQNKKRKAEVILEKIWKVNPHP-----------EIANIYTHLLSENT----VGKLKRAL 315 Q+K +A +L+K K H E+A Y L E+ L +A Sbjct: 252 QKQDKVVEAIDLLQK--KRAMHRSAKDRFNDFTFELAEFYLFLAEESPETNRKESLSQAR 309 Query: 316 RLEEIN------KESVESL-VIVSKIALEMGSIDQAHAKAM-----LAMKIAPRKEIFLL 363 +L I ++++ +++ A+ G +++A ++ P I ++ Sbjct: 310 KLVGIAGRSQGDPQTLQKRDYLLAFSAVLDGDLEKAAHLLESDYVDNYLRTEP--SILVI 367 Query: 364 LAQIEQANSHNTDKILYWTQSALH 387 A++ + K A Sbjct: 368 AAKVHHG-LGDERKAGELLLMAKR 390 >gi|255084906|ref|XP_002504884.1| predicted protein [Micromonas sp. RCC299] gi|226520153|gb|ACO66142.1| predicted protein [Micromonas sp. RCC299] Length = 1072 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 10/110 (9%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNP--HP---EIANIYTHLLSENTVGKLKRALRLEEIN 321 A+ I N R+A L + +++P H + A +Y + L++ L E Sbjct: 305 AEMSIRLNNPRQALYCLGQALRLDPDDHDNRWDQARLYVDI--GEPKRALEQFQNLRERI 362 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL---LAQIE 368 ++ E V ++K+ +MG+ D A + M P + L LA+++ Sbjct: 363 PDNPEVAVELAKMHYQMGNPDLAESTLDELMAAHPTRADATLVNILAELK 412 >gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 942 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 77/258 (29%), Gaps = 42/258 (16%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 IG+ A KAL PD+ E+ AITF ++ + + Sbjct: 59 LNIGEYEEAIASFEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPD--SY 116 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDN---------SIMASICAAKSLISQNK 275 A L +L G+ + +++++ + + L + Sbjct: 117 EAWLNRGLALAKL--GEYEEAIASYDKAIQIKPDKHETWHNWGLV---------LDDLGE 165 Query: 276 KRKAEVILEKIWKVNPHPEIANIY-------THLLSENTVGKLKRALRLEEINKESVESL 328 +A +K + P++ + L + + + + ++ Sbjct: 166 YEEAIASYDKALQCK--PDLHETWHNRGAALADLREYEKA--IASYDKALQFKPDLHKTW 221 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 K ++G ++A A++I P K L + A +K + AL Sbjct: 222 HNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYDKALQF 281 Query: 389 MPDPLWISDDGYLSSVWL 406 PD WL Sbjct: 282 KPD---------FHDAWL 290 >gi|168054571|ref|XP_001779704.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668902|gb|EDQ55500.1| predicted protein [Physcomitrella patens subsp. patens] Length = 922 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 89/257 (34%), Gaps = 21/257 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A N A + H V + LL + E + P + Sbjct: 11 AGNYKNALQ-HCLVVHNKNPQRTDALLLLGAIYYQLHDFDMCIAKNEEAIRIEP--QFAE 67 Query: 157 VYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y + + G+++ A +Y + A+++ P+ + Y+ A Sbjct: 68 CYGNMANALKEKGNIDLAIQYYSVAIELKPNFCDAWSNLASAYMRKGRLQEAAECCQHAL 127 Query: 216 KNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + N LL A+ L + +Y +E+++L +A A L+ Sbjct: 128 TLNPRLVDAHSNLGNLLKAQGLTHH-------AYLCYVEAIRLQPTFAIAWSNLAGLLME 180 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEE----INKESVES 327 + +KA ++ ++ P A+ + +L + +G+ + A+ + + + Sbjct: 181 AGELQKALAYYKEAIRLK--PNFADAHLNLGNVLKAIGRHQEAISCYNRSIQLRPDYAIA 238 Query: 328 LVIVSKIALEMGSIDQA 344 ++ + E G +D A Sbjct: 239 YGNLASVYYEQGLLDYA 255 >gi|126273311|ref|XP_001376047.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 593 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 51/149 (34%), Gaps = 9/149 (6%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKK 216 C A+ KAL I PD P A+ + KE+S + Sbjct: 258 GWALLKCGRKYYERAKACFEKALKIEPDNPEFNSGFAIAAYRLDDKEYSCQRVSSLDPLR 317 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI-CAAKSLISQNK 275 A E N + ++ +L+ D E+L+ +S + AAK QN Sbjct: 318 RAVELNPDNTFVMALLALKLQDLKQEAEGERYIREALEKM-SSQPYVLRYAAKFYRRQNS 376 Query: 276 KRKAEVILEKIWKVNP-----HPEIANIY 299 KA +L+ + P H +I Y Sbjct: 377 PSKALQLLKIALQATPTSAFLHHQIGVCY 405 >gi|91202019|emb|CAJ75079.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 236 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 13/169 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G L+ A +Y KAL I P + Y + ++A L + K + + + Sbjct: 41 SQGKLDEAMQYYKKALSIDPYNRDAHCNIATVYHKKGQLNKA---LEEYKIVLELYPYDP 97 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 IL +++ A + + ++++L + A + +N+ A +K Sbjct: 98 QILYNVGAIQ-ARNNNQDNAIAFWEKAVELKPDFTEAQYALGIAYAQKNRFDDAIKSYKK 156 Query: 286 IWKVNP-HP----EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESL 328 + + P P + YT + + LK++++L N + S Sbjct: 157 VLETQPDDPVLYNNLGAAYTETGKLDEAIAALKKSIQL---NPKIPMSH 202 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 12/123 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R + ++A + KA+++ PD A+ Y + AI + + + Sbjct: 109 RNNNQDNAIAFWEKAVELKPDFTEAQYALGIAYAQKNRFDDAIKSYKKVLETQPD----D 164 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK----SLISQNKKRKAEV 281 +L + G +AI +LK + K + + AE Sbjct: 165 PVLYNNLGAAYTETGK----LDEAIAALKKSIQLNPKIPMSHKNLEFAYRKKGLIEDAEK 220 Query: 282 ILE 284 L+ Sbjct: 221 ELK 223 >gi|27379561|ref|NP_771090.1| hypothetical protein blr4450 [Bradyrhizobium japonicum USDA 110] gi|27352713|dbj|BAC49715.1| blr4450 [Bradyrhizobium japonicum USDA 110] Length = 720 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 7/188 (3%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A +A+ + P+ ++ ++ RA ++ + A + + Sbjct: 118 AIELHERAIRLKPNYADAFCNRGMAELMIGQFERAGVDFDRALS----FQPRHAEAIAGK 173 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++ + + A+ SL L S + + ++ + +A + +P Sbjct: 174 AMVSLELRHFEAAEAAFEASLALKPGSPRILVQRGRLHLTLYRLEQAAADFDAALAQSPR 233 Query: 293 PEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 E+A + ++ NT G + L E+N +S + +++ G I A Sbjct: 234 NELALCWRAQVDIMVRNTAGAMAGVKTLLEVNPQSEAGMSLLASCHANQGDIATALEYLD 293 Query: 350 LAMKIAPR 357 A+ IAP Sbjct: 294 AALAIAPD 301 >gi|88704866|ref|ZP_01102579.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88701187|gb|EAQ98293.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 513 Score = 43.0 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 82/319 (25%), Gaps = 64/319 (20%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYV--------------SQQHTFHNEYLVYLLEVQIAL 131 +A+ A NI A+++++ V L ++A Sbjct: 5 EAMSQAAAQEKAGNIDEAKRLYAQVLNVEPGNKKAKKSLKALRGNSKAPLTAADFERVAQ 64 Query: 132 A--ERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + + A + + L + + R+ + A AL + P Sbjct: 65 LISVGKLDAARADINKLCRLHPEQPALHNLRGVVL--SRLSEPEHALEAYKAALSLEPAF 122 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + Y ++ A+ + + A + + G + Sbjct: 123 SEALNNLATVYTDLGQYKEALGCYQELVNRGEA----DAEVYANLARALRGAGQQENALE 178 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H-------------- 292 +LK+ A L K +A E + P H Sbjct: 179 ALRRALKINPLYTDAFNDIGNLLNDMGKHEEAIKAYESALNIEPRHRKALLNLALSYSSM 238 Query: 293 --PEIA-NIYTHLLSENTVGK-------------------LKRALRLEEINKESVESLVI 330 P++A +Y L+ + ++ RL +N E + + Sbjct: 239 GKPQLAIALYQELIEMQPEDRRTLSGIANALLALGRDKDAIQYLERLLRLNPEDRPTKHL 298 Query: 331 VS---KIALEMGSIDQAHA 346 ++ L G A Sbjct: 299 LAAVTGDNLTRGDTAYARE 317 >gi|332305783|ref|YP_004433634.1| response regulator receiver [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173112|gb|AEE22366.1| response regulator receiver [Glaciecola agarilytica 4H-3-7+YE-5] Length = 538 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 55/143 (38%), Gaps = 9/143 (6%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L ++ ++ Y A + +L + T +A L + + +A++ + Sbjct: 168 PLALKIKGEVLQLCGHYTQARVFYKAILNVQ-TFTWAQLGLVKTYLHLNEDEAAEKLVLR 226 Query: 180 ALDISPDAPWVT-EAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNRAILLIARSLENA 237 L P++ + ++ + ++ A+ L + + + R++ ++ ++R Sbjct: 227 -LAFKPESQLAAYDLLMSLQIKQGDFDTALECVLMASEISPRNIRRHKTVVDLSRITH-- 283 Query: 238 DKGDMIASYHDAIESLKLCDNSI 260 D + A + +K NSI Sbjct: 284 ---DYHTQFEAAKKVVKFAKNSI 303 >gi|300870192|ref|YP_003785063.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] gi|300687891|gb|ADK30562.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000] Length = 600 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 2/155 (1%) Query: 91 GLMSIAAHNIPLA-RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G++++ LA + V + + + + +L I + + A E L Sbjct: 169 GIIALNEGMQSLAYDTLSKLVRKSNNEYADMAANVL-GDIYVIAGDTDSAIEMYLKSLAN 227 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T+ +V L ++ D +S ++ + L +P+ A+ Y ++ +AI Sbjct: 228 SKTQVESVKRLVKVYEQVEDYDSIKKVYEQILYQNPNDINTIIALGNLYEEENDYDKAIK 287 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + K N AI L+A + K D Sbjct: 288 YYYRLSKIKNYTNAYEAIGLLANAYYKGSKLDEAE 322 >gi|237813335|ref|YP_002897786.1| tetratricopeptide repeat protein [Burkholderia pseudomallei MSHR346] gi|237504254|gb|ACQ96572.1| tetratricopeptide repeat protein [Burkholderia pseudomallei MSHR346] Length = 614 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L +L L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSLTLAQMH 312 >gi|255070789|ref|XP_002507476.1| PsbB mRNA maturation factor Mbb1,chloroplast precursor [Micromonas sp. RCC299] gi|226522751|gb|ACO68734.1| PsbB mRNA maturation factor Mbb1,chloroplast precursor [Micromonas sp. RCC299] Length = 601 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 76/248 (30%), Gaps = 15/248 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G+++ A++ A + A + RA + + Sbjct: 228 AEGNVSKARQLFDAATAANKTHAAAWHAWGMFEKSLGNFQRARDLFLKGVR-LVPATSAN 286 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLISQNKKRKAEVIL 283 A L + + ++G + + E K + A++ A + +A + Sbjct: 287 AHLFQSLGVMAMERGRIQEAREHFKEGTKTESGAQSAALWQAWAILESREGNSDQARKLF 346 Query: 284 EKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEM 338 ++ V+ PE ++ + E G + RA L +N L ++++ Sbjct: 347 QRGLSVD--PENRYVWLSWAVYEAQEGFIDRARGLLRRGCELNPSDPPLLQALARLEASE 404 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDPLWISD 397 G+I A K+ P + + + + N + Q + A D Sbjct: 405 GNITAARQLFEQGTKLDPLHQANWQAWALAEWRAGNVHRARQLMQRGVWVAPR----CCD 460 Query: 398 DGYLSSVW 405 L W Sbjct: 461 ACKLFQAW 468 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 20/170 (11%), Positives = 57/170 (33%), Gaps = 6/170 (3%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-ML 147 G+M++ I AR+ ++ + ++ + E + A + + + Sbjct: 292 SLGVMAMERGRIQEAREHFKEGTKTESGAQSAALWQAWAILESREGNSDQARKLFQRGLS 351 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P R + +E+ G ++ A+ + +++P P + +A+ + + A Sbjct: 352 VDPENRYVWLSWAVYEAQ-EGFIDRARGLLRRGCELNPSDPPLLQALARLEASEGNITAA 410 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Q + + A +L G++ + + + Sbjct: 411 RQLFEQ----GTKLDPLHQANWQAWALAEWRAGNVHRARQLMQRGVWVAP 456 >gi|167739676|ref|ZP_02412450.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 14] Length = 376 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L +L L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSLTLAQMH 312 >gi|156740060|ref|YP_001430189.1| hypothetical protein Rcas_0032 [Roseiflexus castenholzii DSM 13941] gi|156231388|gb|ABU56171.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941] Length = 1445 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 72/226 (31%), Gaps = 15/226 (6%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + DL+ A A L+ P + + + ++ +++ A + + Sbjct: 14 RQWLETNDLDRAIGMAHHILETYPHCLEAHQMLGEAHLANRQYEEACMHFEHALQ----F 69 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L+ + G + + +L++ + + A + Sbjct: 70 DPEHIPALVGLGMTCERLGQLERAISAFERALEIKPDLPELRSQLLRLYTDAWGSEYAHL 129 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 L + +A +Y + ++ + ++S V ++++ Sbjct: 130 RLSRA-------GLARLYA--KGHMLPQAISEFRQVVADQPDRLDSRVALAEVLWRDEQE 180 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSAL 386 ++A + P + L+L IE A + + + +W +A Sbjct: 181 EEAADVCRDILAKHPHVLKANLILGYIELAAGNPSGE-QFWKAAAA 225 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 16/171 (9%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + + + LA RQY A E LQ A+ L R+G L A +AL Sbjct: 42 AHQMLGEAHLANRQYEEACMHFEHALQFDPEHIPALVGLGMTCERLGQLERAISAFERAL 101 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +I PD P + +++ Y A W E+ R + + A Sbjct: 102 EIKPDLPELRSQLLRLYTDA--W-------------GSEYAHLR-LSRAGLARLYAKGHM 145 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + + + + + + + + A+ L ++ +A + I +PH Sbjct: 146 LPQAISEFRQVVADQPDRLDSRVALAEVLWRDEQEEEAADVCRDILAKHPH 196 >gi|186475263|ref|YP_001856733.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gi|184191722|gb|ACC69687.1| TPR repeat-containing protein [Burkholderia phymatum STM815] Length = 592 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 46/166 (27%), Gaps = 4/166 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A + +L + Y L + ++ A +L + P Sbjct: 19 HALALHRAGDLDRAGQAYRAILDLQPDDANTRYMLGVLHLQRQEVERAIECFDASLALQP 78 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D + + A F + + A + A+ + Sbjct: 79 DHADCLNDRGIAALSRGDHEDAAHFFRRATECAP----HDALAHCNLGKALRRLSKPEEA 134 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +L L D + A++ +A L + + +A E + P Sbjct: 135 LASFQRALALDDGDVEAALGSADMLETLARPHEAVTAYEYAARFAP 180 >gi|90022893|ref|YP_528720.1| TPR domain-containing protein [Saccharophagus degradans 2-40] gi|89952493|gb|ABD82508.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40] Length = 591 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 100/298 (33%), Gaps = 28/298 (9%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 +H++ LAR+ + + Q + + L + + Y A + ++ A Sbjct: 284 SHDLELARQQYQILFSQR--PQDADILLSLALVEMESELYESAISHFQQLIDRKQHDATA 341 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQK 214 Y L + A ++ ++P +++ AV + + ++ A+ ++ K Sbjct: 342 HYQLGKIHELRNRPDLALQHYK---AVTPSQEFLS-AVYKASEMMAQQDIYNALQYV--K 395 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ + R L + + D G+ + + L + +S+ A + Sbjct: 396 GLHSSTPKQYRDSLYLREANLLLDAGNPDGALAAMAKGLDIAPDSVNLLYSRAMLYTQLD 455 Query: 275 KKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE-------EINKE 323 A ILE P+ A + L + R +N + Sbjct: 456 DLALAEADFTQILEL------RPDNAAA-LNALGYTLADRTDRLDEAYNYISRALSLNPD 508 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 L + + +G+I A + AM I P EI L ++ + + I W Sbjct: 509 DPAILDSMGWVEYRLGNIPAALKRLRQAMSILPDHEIAAHLGEVLWVTGNKNEAIETW 566 >gi|119358297|ref|YP_912941.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119355646|gb|ABL66517.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides DSM 266] Length = 243 Score = 43.0 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 7/103 (6%) Query: 160 LYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + ++ GD SA + TKA+++ P + + + ++ AI + Sbjct: 30 IMLQAEEQLDKGDYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDAIEDFS---- 85 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A E + N A R+ A D + D ++KL Sbjct: 86 IAIELDPNAAEAYYNRAAAKASIEDHKGAREDRKMAMKLDPKL 128 >gi|327262216|ref|XP_003215921.1| PREDICTED: tetratricopeptide repeat protein 13-like [Anolis carolinensis] Length = 823 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 40/229 (17%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--DLNSA-QRYAT--KALDISPDA 187 Y+ A ++ MLQ A+Y R G D+ +A + + ++PD Sbjct: 132 SGLYDEAIQQFSTMLQEQPELVSAIYGRGIAYGRKGLHDIKNAELALFELSRVISLAPDH 191 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK---------------------------- 219 P V E + A+ L++ + Sbjct: 192 PEVFEQRAEILSPLGRIVEALADLSKAIQLKPSARLYRHRGTLYFISEDYATAQEDFQNS 251 Query: 220 -EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E NRN+ I ++ + L +G + + E+LK + + A ++ Sbjct: 252 LELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFVDAYKSLGQAYRELGNFEA 311 Query: 279 AEVILEKIWKVNP-HPEIAN-----IYTHLLSENTVGKLKRALRLEEIN 321 A +K +N H + +Y H + + KR L+LE N Sbjct: 312 ATENFQKALMLNQNHVQTIQLGGMMLYHHGSPDEALKNFKRCLQLEPYN 360 >gi|322816107|gb|EFZ24540.1| tetratricopeptide repeat domain protein [Trypanosoma cruzi] Length = 1344 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 56/308 (18%) Query: 97 AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-------MLQ 148 + ++ A+ M + H +LL QI ++A + LE M Sbjct: 504 SGDLNRAQTMITKSIRHVHVLPE---AFLLSAQICQYIGNASLASQALEQALTLDFDMKD 560 Query: 149 IPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTE--AVVQQ 197 P + + Y + L A + + + P P + + Sbjct: 561 QPQYNLLHGIVLGMMNKYQNAL--EALQLALKLTKEKSRVTTKGRPLQPLSLQDHVSLYL 618 Query: 198 YVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD---A 249 + ++ A L + KE ++ A MIA+ D A Sbjct: 619 QLAQTYLRLRDTEEARATLVEATAMFKE---------TTQAGRVAIANAMIAARTDMDKA 669 Query: 250 IESLKLCDN----SIMASICAAKSL--ISQNKKRKA---EVILEKIWKVNPHPEIANIYT 300 +E LK A A QN+ A E ++E++ + ++ YT Sbjct: 670 VEILKQVPPRSEFFTAAKTRMANLYLTYRQNRHMYANCFEELVEEVPTAQSYFQLGEAYT 729 Query: 301 HL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 ++ E + +RA ++ E+ E V + + + +A A+ A Sbjct: 730 NIQEPEKAIAAYERAK---AMDPENAELAVRIGRALVSTHDYQRAVRYYRDAV--ASDGV 784 Query: 360 IFLLLAQI 367 F +LA + Sbjct: 785 NFTVLADL 792 >gi|284051331|ref|ZP_06381541.1| TPR repeat-containing protein [Arthrospira platensis str. Paraca] Length = 526 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 22/277 (7%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQYNIAHEKLEMML 147 G + + A + + + + LV +L+ Q+ Q+ A + + Sbjct: 246 QGTALANSGKLSEAAESYQKALEL----DPNLVEILQPLGQVLTQLNQWEAAVDIFQKAT 301 Query: 148 QIPATREFAVYSLYFESCRIGDLN-SAQRYATKALDISPDAP----WVTEAVVQQYVLAK 202 Q+ + Y ++ D A +A ++ P + + +A+ + Y Sbjct: 302 QVDP-NSASFYHQLGQALAKCDRLLEALAAYKRASELHPTSTPVLFDLGQALTKLY---- 356 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 WS AI + N+ + + D + + +S + NS + Sbjct: 357 HWSEAIATYQKALYLNPP-NQAEIQTHLQEVQDKQRHLDEEIAAYS--DSHEFHPNSSES 413 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEE 319 A+ L S+ K A + + +NP +A+ YT + + + E Sbjct: 414 YEKFAQFLRSKGKIEDAIIGFHQACILNPQSAVAHHQLGYTLARGQRWDEAILAYQKAAE 473 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +N S + + +E G +D+A A ++ I P Sbjct: 474 LNPYSPHVQYHLGEALVEEGRLDEAIAHFKQSITIDP 510 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 85/255 (33%), Gaps = 16/255 (6%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y +L L ++ A + + + +E L L + ++ ++ Sbjct: 175 YLSLGQTLEAL--GETEEAIASYRRSYELNPSLSEALPKLQT--VLESQGRWEELATLYR 230 Query: 145 MM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P + Y + +A+ Y KAL++ P+ + + + Q + Sbjct: 231 RCCIVDPNSATSHKYQGTALANSGKLSEAAESY-QKALELDPNLVEILQPLGQVLTQLNQ 289 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 W A+ + + + N + ++L D+ ++ + + +L S Sbjct: 290 WEAAVDIFQKATQ--VDPNSASFYHQLGQALAKCDR--LLEALAAYKRASELHPTSTPVL 345 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLE 318 ++L +A +K +NP P A I THL + + Sbjct: 346 FDLGQALTKLYHWSEAIATYQKALYLNP-PNQAEIQTHLQEVQDKQRHLDEEIAAYSDSH 404 Query: 319 EINKESVESLVIVSK 333 E + S ES ++ Sbjct: 405 EFHPNSSESYEKFAQ 419 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 60/202 (29%), Gaps = 35/202 (17%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + R G L+ A +A+ SP + W + + + AI + A E Sbjct: 10 NQLLRKGQLDEAIASYNQAIAESPQSAWYYHNLGEALSQQGKIDEAI----AAYRQATEL 65 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N N A +G++ + ++++L + A LI + + +A Sbjct: 66 NPNSAWSYDNLGTLLNQQGNLPEAVSCFRKAIELDPDFSEFYHNLALVLIKEGRLEEAVS 125 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +L+K E+ + E + K + Sbjct: 126 LLQKA-------------------------------IELKADDAELYHSLGKAYQQQQQY 154 Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363 +A +++ P L Sbjct: 155 SEAVTAYRQGLELNPYWSDCYL 176 >gi|153006768|ref|YP_001381093.1| hypothetical protein Anae109_3930 [Anaeromyxobacter sp. Fw109-5] gi|152030341|gb|ABS28109.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 974 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 49/169 (28%), Gaps = 5/169 (2%) Query: 54 AWILLFAVSRFFLSCPAMLFHMLHKRNYDKGY---KALYTGLMSIAAHNIPLARKMHSYV 110 A + A++R L PA L D A++ L +A P AR + + Sbjct: 699 AVRIQRAIARLRLGQPAAARRELEATGRDGRMPAEAAVWYALADVALGRAPRARALLEKL 758 Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 S T LV+ + AE A + + L G Sbjct: 759 SLARTP--PPLVHAALGRALEAEGNLAGAERAYRTAAEREPDAPEGLAGLGRVLVARGHA 816 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 A A+ + P A+ + ++A A L+ Sbjct: 817 KDAIAPLEDAVRMDPADLEARRALGEARLVAGLAGSARAELDAVLLARP 865 >gi|58039993|ref|YP_191957.1| hypothetical protein GOX1560 [Gluconobacter oxydans 621H] gi|58002407|gb|AAW61301.1| Hypothetical protein GOX1560 [Gluconobacter oxydans 621H] Length = 514 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 1/129 (0%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R GDL +AL + PD P + + ++AI + K + Sbjct: 291 ALRSGDLEQEADALHRALVLRPDNPEFLIQLAEVEDQRGNHTQAIDLYTRALKASPPRKE 350 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVI 282 +L+ R++ + G+ D +L+L + + I + + +A + Sbjct: 351 ILWPILLGRAMAAEESGNWPMVQDDMKHALELAPDQPEVLNFVGYANIEHDADQAQALAM 410 Query: 283 LEKIWKVNP 291 L+K + P Sbjct: 411 LKKAVDLQP 419 >gi|307154454|ref|YP_003889838.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7822] gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822] Length = 434 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 8/131 (6%) Query: 134 RQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + Y A E L R + L R GD SA KA+ ++P Sbjct: 92 KDYRGAIEDYNKAISLNPKEARYYNNRGLALH--RSGDSKSALEDYNKAISLNPKLAEAY 149 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +++ RA+ NQ + + A R + ++ G+ D Sbjct: 150 TNRGFIRDELRDYRRALADHNQALR----LDPKNATAYNNRGVTLSNLGNFQEGLEDFER 205 Query: 252 SLKLCDNSIMA 262 +++L + +A Sbjct: 206 AIRLDPSIAIA 216 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 11/114 (9%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D A +K + I+P K++ AI N+ Sbjct: 54 KLKAKDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNP---- 109 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A R L GD ++ D +++ L A++ ++ R Sbjct: 110 KEARYYNNRGLALHRSGDSKSALEDYNKAISLNPKL-------AEAYTNRGFIR 156 >gi|167919999|ref|ZP_02507090.1| tetratricopeptide repeat protein [Burkholderia pseudomallei BCC215] Length = 614 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|158341361|ref|YP_001522526.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017] gi|158311602|gb|ABW33212.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017] Length = 505 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 5/154 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A +Q+ A Y+ + R+GD A K + ++PD Sbjct: 332 GDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLNPDNALAYNN 391 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI ++ + ++ R D + D +++ Sbjct: 392 RGNALSELGDLNGAIADYDKAIQLNPDYPG----AYYNRGNTRFRLSDPNGAITDYDKAI 447 Query: 254 KLCDNSIMASICAAKSLISQNKKRKA-EVILEKI 286 +L + A A S ++ A + E Sbjct: 448 QLNPDHAGAYYNRAIVRRSLGDRKGAIADMTEAA 481 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 63/209 (30%), Gaps = 15/209 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L + A + A E L + L + D A KA+ Sbjct: 254 FLRAEKARQQNDNKAAIELYTRAIRLNADYANAYNNRGLLRQ--NFNDNKGAIADFEKAI 311 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++PD + + AI ++ + A R ++ GD Sbjct: 312 QLNPDDSFAYNNRGNALSELGDREGAIADYSKAIQLNPV----NAGAYYNRGIDRYRLGD 367 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299 + D ++++L ++ +A +L A +K ++N P+ Y Sbjct: 368 NRGAIADFEKTIQLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLN--PDYPGAYYN 425 Query: 300 ---THLLSENTVGKLKRALRLEEINKESV 325 T + G + + ++N + Sbjct: 426 RGNTRFRLSDPNGAITDYDKAIQLNPDHA 454 >gi|115377527|ref|ZP_01464727.1| putative TPR domain protein [Stigmatella aurantiaca DW4/3-1] gi|310820083|ref|YP_003952441.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115365467|gb|EAU64502.1| putative TPR domain protein [Stigmatella aurantiaca DW4/3-1] gi|309393155|gb|ADO70614.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 241 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 54/184 (29%), Gaps = 11/184 (5%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQR 175 +E L LL + ++QY A + + VY++ G AQR Sbjct: 2 DEPLKQLLTLGRGYFDKKQYAQAEQ-YLAQVVEQNQSFADVYNMLGIIYHDQGQFARAQR 60 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--------NRNRAI 227 AL I+P + Y +++ A K A Sbjct: 61 AFEAALRINPAYTEAALNLAVIYNDMGKYAEAKEVYQGALAQQKNAPGEMDPYVKGKIAN 120 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + G + + +L LC + I +L + +A E+ Sbjct: 121 MYADIGNVFSSNGAWAQAIEEYQRALVLCPQFVDIRIKLGDALRDAGRHAEALAQFEQAI 180 Query: 288 KVNP 291 NP Sbjct: 181 AQNP 184 >gi|92114109|ref|YP_574037.1| sulfotransferase [Chromohalobacter salexigens DSM 3043] gi|91797199|gb|ABE59338.1| sulfotransferase [Chromohalobacter salexigens DSM 3043] Length = 1415 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 4/115 (3%) Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A K + P P + + KE+ A L K + + + + L + + Sbjct: 18 ARKQVQRHPTDPDAWLTLGKLQAGQKEFYDAKASLE-KARELRPNHHEQEEWLGYVAHKQ 76 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D + DA+E L NS + + K K+ +K W+ +P Sbjct: 77 HRLQDALQHLQDALE---LAPNSAFGLATLSYLYLDMGKPYKSIEYAKKAWQFSP 128 >gi|325143912|gb|EGC66222.1| IgA-specific serine endopeptidase [Neisseria meningitidis M01-240013] gi|325206456|gb|ADZ01909.1| IgA-specific serine endopeptidase [Neisseria meningitidis M04-240196] Length = 1786 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 73/254 (28%), Gaps = 40/254 (15%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ Sbjct: 1157 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1201 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDISPD 186 L +Q A + + + E+ R + ++ A KA ++S + Sbjct: 1202 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1253 Query: 187 APWVTEAVV----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 EA QQ LA++ A K E R A L + Sbjct: 1254 QKATAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1312 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A + + A+ +AK + R+A ++ + H + A Sbjct: 1313 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1364 Query: 303 LSENTVGKLKRALR 316 + + KR Sbjct: 1365 ---SQPQRRKRRAA 1375 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 12/230 (5%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E + + ++ A A + E +Q + S + ++K++ A E + Sbjct: 1026 EQVKRQQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEKEREAAELS 1085 Query: 223 RNRAILLI--ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + + A++L K + + A E + + A+ +AK + + ++R+ Sbjct: 1086 AKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQRVGEEERRQTA 1145 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + K P Y + + R + + +VE + ++ L Sbjct: 1146 QSQPQRRKRRAAP---QDYMAASQDRPKRRGHR-----SVQQNNVE--IAQAQAELARRQ 1195 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ A +LA + A + LA +A + + A Sbjct: 1196 QEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAER 1245 >gi|319761242|ref|YP_004125179.1| tetratricopeptide tpr_1 repeat-containing protein [Alicycliphilus denitrificans BC] gi|317115803|gb|ADU98291.1| Tetratricopeptide TPR_1 repeat-containing protein [Alicycliphilus denitrificans BC] Length = 734 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + ++ L + + + + + +L I A ++ Sbjct: 94 GRKAEALTAFERAIALAPGLALAHYNRATVLEGMGREQESMDSYRQVLCIEPGHVQAQFN 153 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L R A + L + P + ++ A+ +Q Sbjct: 154 LGCLHLRRKAYGEAVACMDRVLALEPRLAQAHNNRGNALLKSRHLLEAVASFDQALALQP 213 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ A L+ R + + ++ D +++L + + L + +A Sbjct: 214 QY----ADALVNRGNARLQRKEHAQAFADLDRAIRLNPDQAQSRQLMGTLLRDSKRHEEA 269 Query: 280 EVILEKIWKVNP 291 ++ W+ NP Sbjct: 270 LQEFQRAWRCNP 281 >gi|262304965|gb|ACY45075.1| acetylglucosaminyl-transferase [Chthamalus fragilis] Length = 289 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 8/158 (5%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES 164 ++ + H + L L I + A + + P A +L Sbjct: 42 CYNTALRLMPTHADSLNNL--ANIKREQGFTEEAIRLYCKALEVFPEF-AAAHSNLASVL 98 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G LN A + +A+ I P + ++ A+ + + + Sbjct: 99 QQQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAF--- 155 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A + + D G++ + +L+L + A Sbjct: 156 -ADAHSNLASIHKDSGNIPEAIQSYRTALRLKPDFPDA 192 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 48/158 (30%), Gaps = 11/158 (6%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL + P + AI + + E+ A + + Sbjct: 46 ALRLMPTHADSLNNLANIKREQGFTEEAIRLYCKALEVFPEF----AAAHSNLASVLQQQ 101 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 G + + E++++ A +L + A + ++NP H Sbjct: 102 GKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSN 161 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A+I H S N ++ + + ++ ++ Sbjct: 162 LASI--HKDSGNIPEAIQSYRTALRLKPDFPDAYCNLA 197 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 69/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A+++ P+ P + S + N + A L + Sbjct: 10 RHAIELQPNFPDAYCNLANALKEKGLVSESEECYNTALRLMPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + ++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGFTEEAIRLYCKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 ++ P Sbjct: 184 RLKPD 188 >gi|260827198|ref|XP_002608552.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae] gi|229293903|gb|EEN64562.1| hypothetical protein BRAFLDRAFT_236015 [Branchiostoma floridae] Length = 1183 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 87/253 (34%), Gaps = 37/253 (14%) Query: 136 YNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A + + + P + + L + G + A + +AL I+ D P + Sbjct: 518 YQDAERLYKEVLREHPNYVDCYLR-LGCMARDRGQIYEASDWFKEALQINQDHPDAWSLI 576 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA----------RSLENADKGDMIA 244 ++ +EW + K+ + ++L + + + +K Sbjct: 577 GNLHLAKQEWGPGQKKFERILKHPDTASDAYSMLALGNVWLQTLHQPQRDKEKEKRHQDR 636 Query: 245 SYHDAIESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPE 294 + + L+ N A ++ A K+ I + + R+A + +W Sbjct: 637 ALAMYKQVLRNDPKNLYAANGIGAVLAQKNCIREARDVFAQVREATADMRDVWLN----- 691 Query: 295 IANIYTHLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 +A+IY + + LK+ + + L+ +++ ++G + + Sbjct: 692 LAHIYVEQRQYVSAIQMYENCLKKF-----YKCQDTDVLLYLARAYYKLGKHKECRQILL 746 Query: 350 LAMKIAPRKEIFL 362 A ++P + L Sbjct: 747 KARHVSPHDTVLL 759 Score = 41.8 bits (97), Expect = 0.29, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 81/252 (32%), Gaps = 26/252 (10%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISP 185 + + Y+ A + Q +T+ L GD +A + K L P Sbjct: 318 ARSFHVQGDYDQAFQYYYQATQFASTQFVLPQFGLGQMYIYRGDNENAAQCFEKVLKHFP 377 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--NAKEWNRNRAILLIARSLENADKGDMI 243 + + + Y + + Q K + + A + +A+ LE +D + Sbjct: 378 NNYETMKILGSLYAQSSD-QEKRDIAKQHLKKVTEQFPDDVEAWIELAQILEQSDIQGAL 436 Query: 244 ASYHDAIESLKLCDNS-IMASIC--AAKSLISQNKKRKAEVI----LEKIWKVNPHPE-- 294 +Y A LK + + I ++A+ L++ + H E Sbjct: 437 QAYGTATRILKEKVQADVPPEILNNVGALHFRLGNLQEAKKYYVASLDRSKQEAQHDETY 496 Query: 295 -----------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +A ++ L +L + + V+ + + +A + G I + Sbjct: 497 YSAISVTTSYNLARLFEALCMYQDAERL--YKEVLREHPNYVDCYLRLGCMARDRGQIYE 554 Query: 344 AHAKAMLAMKIA 355 A A++I Sbjct: 555 ASDWFKEALQIN 566 >gi|167895374|ref|ZP_02482776.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 7894] Length = 614 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|160886584|ref|ZP_02067587.1| hypothetical protein BACOVA_04595 [Bacteroides ovatus ATCC 8483] gi|237723405|ref|ZP_04553886.1| TPR-repeat-containing protein [Bacteroides sp. 2_2_4] gi|260173318|ref|ZP_05759730.1| TPR repeat-containing protein [Bacteroides sp. D2] gi|315921592|ref|ZP_07917832.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108469|gb|EDO10214.1| hypothetical protein BACOVA_04595 [Bacteroides ovatus ATCC 8483] gi|229447927|gb|EEO53718.1| TPR-repeat-containing protein [Bacteroides sp. 2_2_4] gi|313695467|gb|EFS32302.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 272 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 9/170 (5%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 +A L Q K + N A+L L G+ + +L ++ + Sbjct: 39 KAEELLLQALK-LEPKNAKNALLFSNLGLVQRRLGEFDKALESYSFALNFAPLAVPILLD 97 Query: 266 AAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTH-LLSENTVGKLKRALRLEEI 320 A + K +A +L++ K N + Y + L + ++ RL E+ Sbjct: 98 RAAIYMEMGKTDRAYTDYCQVLDED-KQNKEALLMRAYIYVLRRDYPAARID-YNRLLEL 155 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ 369 + +S + ++ + + G ++ + P +++ A +E+ Sbjct: 156 DPQSYSGRLGLATLEQKEGKFRESLEILNKMITATPDDATLYIARADVER 205 Score = 37.6 bits (86), Expect = 5.4, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 6/166 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + L I + + + A+ +++ + +E + Y R D +A+ + Sbjct: 94 ILLDRAAIYMEMGKTDRAYTDYCQVLDEDKQNKEALLMRAYIYVLRR-DYPAARIDYNRL 152 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L++ P + + ++ ++ LN+ + A L IAR+ + Sbjct: 153 LELDPQSYSGRLGLATLEQKEGKFRESLEILNKMITATPD----DATLYIARADVEREMK 208 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + D E+++L S A + ++Q KK A+ EK Sbjct: 209 HEDLALVDLEEAIRLDAASADAYLLRGNIYLAQKKKGLAKADFEKA 254 >gi|9910234|ref|NP_064481.1| interferon-induced protein with tetratricopeptide repeats 1-like protein [Rattus norvegicus] gi|7329753|emb|CAB82773.1| glucocorticoid-attenuated response gene 16 product [Rattus norvegicus] Length = 463 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 88/236 (37%), Gaps = 29/236 (12%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + + + + P + L + +G+ + A+ + +AL + +V + + Sbjct: 198 RKAVRLNPEDPHLKVL----LALKLQDLGEQDEAETHIEEALSSTSCQSYVFRYAAKYFR 253 Query: 200 LAKEWSRAITFLNQKKKNAKEW---NRNRAILLIARSLENADKGDMIASYHDAI------ 250 + + A+ L++ + + + + + + ++ G+ A + I Sbjct: 254 RKGDINEALHLLHRALQTSPSSGYLHYQKGLCYKQQMIQLKTSGNRQARRQENIQELAHQ 313 Query: 251 ------ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 E+L L MA +C A+ + +AE ++ +N N+ H+ Sbjct: 314 AICEFQETLNLRPTFEMAYVCMAEMQAEIGQYEEAEGNFQEALNLN------NLVAHIE- 366 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 ++ + R+ + + +++ + + L++ A K + A++ + + Sbjct: 367 QDIHFRYGRSQQFHKKSEDKAITHYLKG---LKLEEKSFAWRKLLTALEKVAERRV 419 >gi|312129655|ref|YP_003996995.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] gi|311906201|gb|ADQ16642.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella byssophila DSM 17132] Length = 468 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 5/134 (3%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++LE + + IE+ A + + +KA K + Sbjct: 81 AFKKALEVENAAGGKKAKD--IEAKLKSPELASAYLMQGAGYYNSKNYKKAAEFFSKSSE 138 Query: 289 VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 ++P A +Y + EN G LK + V++I D+A Sbjct: 139 ISPKDTTAALYAGIAEQLLENNAGALKHLNNFIANGGKDASVFYSVAQIYKADKKFDEAV 198 Query: 346 AKAMLAMKIAPRKE 359 M++ P Sbjct: 199 QVLQKGMEVNPTNS 212 >gi|254293220|ref|YP_003059243.1| hypothetical protein Hbal_0852 [Hirschia baltica ATCC 49814] gi|254041751|gb|ACT58546.1| Tetratricopeptide TPR_2 repeat protein [Hirschia baltica ATCC 49814] Length = 273 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 5/122 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 IG A AT+AL + P +++ + + ++ RA L + ++W Sbjct: 89 RAIGSAERAVDVATQALALHPGDVELSKTLAKAHMDTGRPDRATNALYNAVPDGEDW--- 145 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L + GD + ++L + ++ + A SL + K +AE L Sbjct: 146 --VLYSLYGIALDQLGDHKKAQLRYTKALDISPDNQVILANYALSLALEGKPEEAEAKLR 203 Query: 285 KI 286 Sbjct: 204 HA 205 >gi|223938532|ref|ZP_03630424.1| TPR repeat-containing protein [bacterium Ellin514] gi|223892794|gb|EEF59263.1| TPR repeat-containing protein [bacterium Ellin514] Length = 432 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 72/251 (28%), Gaps = 39/251 (15%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRI 167 N+ + Y Q+ L ++ Y +A + T E + + + Sbjct: 187 AEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKSTDLNPTNELSYEYRGWAY--YKS 244 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G A + A+ ++P A LA E S + + N I Sbjct: 245 GAYEKAISDYSSAIQLNP----AESAAYGSRGLAYEKSGELEKAIADYSRGIKLNPTNVI 300 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L AR+ +G D E++K SL N W Sbjct: 301 ALHARAAAYHKQGKFDRVIEDYREAIKRKPT---------DSLSYNN----------LAW 341 Query: 288 KVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + + E V K+A L E K + + E G+ D+A Sbjct: 342 -------LQATCENASFRNGEEAVKNAKKACELAEWKKGYCVGTLSAAYA--EAGNFDEA 392 Query: 345 HAKAMLAMKIA 355 A A+ + Sbjct: 393 LKYAKQALTLE 403 >gi|209526542|ref|ZP_03275068.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209493048|gb|EDZ93377.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 728 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 76/208 (36%), Gaps = 18/208 (8%) Query: 160 LYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L ++ G+ + A +AL++ P+ P V + + AI + + Sbjct: 20 LLHQAETSYLQGEYDQAIAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALE 79 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A L +G + ++ +++ L + + A++L ++ Sbjct: 80 FDPNLPQAHANL----GSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRE 135 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSEN----TVGKLKRALRLEEIN----KESVESL 328 +A ++ +K +++ + HL ++ GKL+ A+ L + E+ Sbjct: 136 SEALIVEQKANQIH---SLTGGSVHLYNQGNQLFNQGKLEEAIALWKQAIVADPNLAEAY 192 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + G +A A+++ P Sbjct: 193 CQLGIVHRHQGQPQEAIPFLEKAIELKP 220 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 70/218 (32%), Gaps = 10/218 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + + N VY+ ++ Q A L+ A Sbjct: 31 GEYDQA--IAACQRALELKPNWPPVYVTMGNVSQGRGQIEEAIRCYAKALEFDPNLPQAH 88 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G L SA KA+ + PD V + + S A+ ++K N Sbjct: 89 ANLGSMFYKQGKLESAIDSYQKAIALKPDLTAVYVNLARALRQMGRESEALIV--EQKAN 146 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ L + + ++G + + +++ N A Q + + Sbjct: 147 QIHSLTGGSVHLYNQGNQLFNQGKLEEAIALWKQAIVADPNLAEAYCQLGIVHRHQGQPQ 206 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGK 310 +A LEK ++ P H I IY S+ + Sbjct: 207 EAIPFLEKAIELKPNLVAAHQNICGIYRD-SSDLAAAR 243 >gi|167829957|ref|ZP_02461428.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 9] gi|226197877|ref|ZP_03793451.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] gi|225930065|gb|EEH26078.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] Length = 614 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|163857686|ref|YP_001631984.1| putative Flp pilus assembly protein [Bordetella petrii DSM 12804] gi|163261414|emb|CAP43716.1| putative Flp pilus assembly protein [Bordetella petrii] Length = 295 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 41/129 (31%), Gaps = 5/129 (3%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L+ Q + +L + L + GD A + +A+ ++ Sbjct: 100 LQADALRRTGQEEQSEAAYRKLLGGSQ-AAQGWHGLGLLAGARGDYAQAAQDLERAVKLA 158 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + + A + + A L + E + + +L +L +G+ + Sbjct: 159 PTDAQMLGDLGYARLRAGDSAGARVPLGKA----AELDPSNIKVLANMALLLVVEGNAVQ 214 Query: 245 SYHDAIESL 253 + + Sbjct: 215 AQQLMDRAN 223 >gi|312222011|emb|CBY01951.1| similar to pre-mRNA-splicing factor prp1 [Leptosphaeria maculans] Length = 932 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 35/262 (13%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E + GD A++ ++ + P + V V A + +A +FL +++A Sbjct: 609 REMWQSGDPEGARKVLGRSFEKLPGNENLYTRAVDFEVDAGNYDQARSFLQVARESAATD 668 Query: 222 NRNRAILLIARSLENADKG-------------------------DMIASYHDAIESL--- 253 ++ R L N + + ++ +A E+ Sbjct: 669 RIFMKSAVLERQLGNFEVALDICNQALQNWPHSWKLHAVKGQIYEQLSKLKEAQEAFNIG 728 Query: 254 -KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKL 311 + S I ++ Q KA L++ + NP +PE+ + + E + Sbjct: 729 TRAAPKSPTLYILLSRIQEKQGAIVKARSTLDRGRQQNPKNPEL--LCEAVRLERRQQNI 786 Query: 312 KRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQ 369 A ++ I +E S ++ ++ + + + Q +A+ A++ ++F+++A+I Sbjct: 787 PAAQKIMAIALQECPNSGLLWAEKIMHLEARTQRKPRALEAIRKVENDAQLFVVVARIFW 846 Query: 370 ANSHNTDKILYWTQSALHAMPD 391 A W A+ PD Sbjct: 847 AERRLDKAA-TWFTKAVVLDPD 867 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 15/194 (7%) Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W+ +A + + A + + + + R + + + + +G + Sbjct: 497 EWLAQA--EICEEEGDKGTAASIVKATIGWGLDEDDERRDIWLEDAKSISSRGRFETARA 554 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-IANIYTHLL--- 303 ++ + S +A +LE+ P+ E + +Y + Sbjct: 555 ILGHAVSIFPYSTTVWHASADLEKHHGTAESLLSVLERAVTACPNSESLWLLYAREMWQS 614 Query: 304 --SENTVGKLKR-ALRLEEINKESVESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKE 359 E L R +L + E+L + ++ G+ DQA + +A + A Sbjct: 615 GDPEGARKVLGRSFEKL----PGN-ENLYTRAVDFEVDAGNYDQARSFLQVARESAATDR 669 Query: 360 IFLLLAQIEQANSH 373 IF+ A +E+ + Sbjct: 670 IFMKSAVLERQLGN 683 >gi|312218035|emb|CBX97981.1| hypothetical protein [Leptosphaeria maculans] Length = 1147 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 72/223 (32%), Gaps = 32/223 (14%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN 212 + +++E D A++ KA ++SP E + + + EW A ++ Sbjct: 300 LLGIFYEDYN-KDRKRARQCFQKAFELSPSEIVAAERLARLFANQGEWDIVEVVAQRVVD 358 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMASICAAKSL 270 K ++ + + +L + +L++ + + + +S Sbjct: 359 SGKARQVPGSKRKGVSWPYSALGVVQMNKQEYQKSVVSFLSALRISPDDYYSYVGLGESY 418 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + + A + +P ++ E+ + + Sbjct: 419 HNSGRYNSASR----AFNYAENPGDGIVFKKTEDES------------------WFTKYM 456 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370 ++ + E+ D+A A + P++ I LL +E+ Sbjct: 457 LANVNRELSEFDEALAGYEAVLAKRPKEFGVSIALLQTLVERG 499 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 14/176 (7%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A R + A E + +L+ A+ + + A ++ KAL P Sbjct: 152 YQAPRNHQEAKEIFQGVLKRKPKFTAALIGIGLVLEEEEEYEQAFQFLEKALQQDPSNGR 211 Query: 190 VTEAVVQQYVLAKEWSRAIT---------FLNQKKKNAKEWNRNR----AILLIARSLEN 236 + LA ++ + L+ K+ +E + + Sbjct: 212 IGAESAWCQALAGDYKTGLEKLQGYLDYPQLDASKQRGRELRAQTLYRIGVCIWELDTSK 271 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK-AEVILEKIWKVNP 291 A + D +Y + ++K N NK RK A +K ++++P Sbjct: 272 AARKDRNGAYAKLLAAIKANPNYAPPYTLLGIFYEDYNKDRKRARQCFQKAFELSP 327 >gi|310764776|gb|ADP09726.1| Probable fimbrial biogenesis protein [Erwinia sp. Ejp617] Length = 243 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 58/164 (35%), Gaps = 7/164 (4%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 L++ + A L + Q P + ++ + GD + A+ + +AL +P Sbjct: 36 AYLSKGNMDAARRNLQRALSQAPDDYRVQL-AMARYQQQTGDRSRAEHHYHRALARAPSN 94 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +V ++ A + +K++ R ++ + G + Sbjct: 95 GYVLNNYGAFLCGLGQYDAAQRQFSLARKDSANGLRADSVENSGYC--FLNAGQQEKARQ 152 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKA-EVILEKIWKVN 290 +++++ A++ K R++ +L +++ N Sbjct: 153 ALVDAVQTDPT--KGLPMLAEAARRLGKGRRSESRLLLDVYQHN 194 >gi|291613670|ref|YP_003523827.1| response regulator receiver protein [Sideroxydans lithotrophicus ES-1] gi|291583782|gb|ADE11440.1| response regulator receiver protein [Sideroxydans lithotrophicus ES-1] Length = 559 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 21/208 (10%) Query: 125 LEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L+ + LA + E + + + + ++++A+ A + + Sbjct: 195 LKAEALLALNDTTDLLKTYEQALAMRDNVPWVKI-GIARARMLLNEVDAAEEMAKQIVAD 253 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P E + + + K+ A + Q K R R+ A L D+ Sbjct: 254 NPSYVAAYELLAEIRRMQKDEEGAYQLMEQSAKILPTAKRFRSNAESAFLLGKLDE---- 309 Query: 244 ASYHDAIESLKLCDNSI---MASICA-AKSLISQNKKRKAEVILEK---------IWKVN 290 + + +++L SI + A+ + A LEK + ++ Sbjct: 310 -AKKYSESAIRLASGSITERPDDYLSLAQIQTDLGDPQGAIHTLEKSARKFEEKGSFGIS 368 Query: 291 PHPEIANIYTHLLSENTVGK-LKRALRL 317 + +A Y + + L+R+ RL Sbjct: 369 KNAILAQAYFDAGDKAAAKRLLERSQRL 396 >gi|167570811|ref|ZP_02363685.1| TPR domain protein [Burkholderia oklahomensis C6786] Length = 614 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + E L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + A+ Sbjct: 143 LGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGRTDEAVAHFRAALAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + +L L +A A +L + + R A Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAEALPAFESALALQPRFPLALFGLANALAALGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L A L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPAHSLAQMH 312 >gi|149186441|ref|ZP_01864754.1| TPR domain protein [Erythrobacter sp. SD-21] gi|148830030|gb|EDL48468.1| TPR domain protein [Erythrobacter sp. SD-21] Length = 654 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 87/286 (30%), Gaps = 20/286 (6%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L Q AL + E +L A+Y + + + A+RY + Sbjct: 8 LSAAQKALQAGDFARGRELAGDLLTEDGKDGEALYMAAVAARYLKQYDDAERYLASLHGV 67 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA--DKGD 241 P+ + + + AI+ + A+ R++ + G Sbjct: 68 MPEYGRAWQEAGHLAKARGQSAEAISAYANATRFNP------ALEASWRAMAPLLTETGR 121 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIA 296 + + + ++ ++ + + A + + +AE I + +P +A Sbjct: 122 VAEAQNAIAQADRIAG--LPKELVAVTHHFHEGRLLRAEEICRHYLRSHPKNVEGMRLLA 179 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 I L L +++ + ++A +A + P Sbjct: 180 KIGMQLGVLEDAEFL--LDSAAAFEPHNIQVRLDYIDALRRRQKFERAREEAEALYRQDP 237 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHA--MPDPLWISDDGY 400 +F IE + + DK A+ A DP ++ G+ Sbjct: 238 ENPLFQSHLAIESMQTGDYDKAFE-LFDAVLARLPNDPATLTSRGH 282 >gi|148977389|ref|ZP_01813989.1| hypothetical protein VSWAT3_22717 [Vibrionales bacterium SWAT-3] gi|145963341|gb|EDK28606.1| hypothetical protein VSWAT3_22717 [Vibrionales bacterium SWAT-3] Length = 1087 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 11/178 (6%) Query: 131 LAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 LA + A + + T+ A+ +L+ E + + A +AL + Sbjct: 225 LARGELGDAERLYRKAIALDNTQPYAFVALAALFLEEKKYSSADKAYS---QALSLDSLN 281 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLN-----QKKKNAKEWNRNRAILLIARSLENADKGDM 242 + + +W A N QK ++ + + +++ R + D Sbjct: 282 GSALRGRLDVEIYQGDWHEAREVANQYSSAQKLVVEEKISSIDSEIILIRLRDAIANNDD 341 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 A ++L +S + A + S K +A+ ++E K PE+ Y Sbjct: 342 KAMAESVEALIQLTPSSPWLRLDIAGVVRSMGNKSRADQLMEDWAKDTSDPEMKFAYA 399 >gi|116620862|ref|YP_823018.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116224024|gb|ABJ82733.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 388 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 8/219 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A S E L Q A + + + A Sbjct: 171 GENEKAAADLSQAVALRPDFAEAWSDL--GQTCKLRMDDAGALAAFQRAVMLSPDDGVAQ 228 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ---- 213 L E G + A + +A ++P+ ++ + A + Sbjct: 229 TRLGAEYLSQGKAHEAVPHLQEATRLNPENQTALYSLQSALRDDGRIAEAQEVKERLVEL 288 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 +K++ N RAI L + G + + +L L + A +L+ Sbjct: 289 LRKRDRASENALRAIQLNNQGAALEKDGKLGEALEKYQSALALAPEHVGIRTNVAAALLR 348 Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGK 310 K ++ L + + P +P + LS+ + Sbjct: 349 LGKWKEGIAELRESLRREPDNPALQTALKDALSKTPAKR 387 >gi|73669941|ref|YP_305956.1| hypothetical protein Mbar_A2461 [Methanosarcina barkeri str. Fusaro] gi|72397103|gb|AAZ71376.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 398 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 58/172 (33%), Gaps = 11/172 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+ A + KAL +P + + AI + K R Sbjct: 170 RLKQHEKALGDSEKALSSNPKLGGAWHSKGSVLADLGRYEEAIEAYDAALKLNPNLAR-- 227 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L+ + + + +LK+ ++ I + K ++A K Sbjct: 228 --VLVGKGFALYSLDRPVEAMIAYDAALKINPDNAKNWIGKGLIHLKLGKFKRAIAACSK 285 Query: 286 IWKVNPHPEIANI-YTHLLSENTVGK----LKRALRLEEINKESVESLVIVS 332 + P+ ++ Y ++ +++ K L R I+ +++E+ ++ Sbjct: 286 AISIK--PDSSDAWYCKGMAFSSLDKNGEALGALERALRIDPDNIEARKALA 335 >gi|262304999|gb|ACY45092.1| acetylglucosaminyl-transferase [Idiogaryops pumilis] Length = 287 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 6/165 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + ++ + H + L L I + A L++ A Sbjct: 34 GMVREAEECYNTALRLCASHADSLNNL--ANIKREQGLIEEATRLYLKALEVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ ISP + + A+ + + Sbjct: 92 SNLASVLQQQGKLNEALLHYKEAIRISPTFADAYSNMGNTLKEMGDVQAALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + + D G++ + +LKL + A Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAVISYRTALKLKPDFPDA 192 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A N + + A L + Sbjct: 10 KRAIELQPNFPDAYCNLANALKEKGMVREAEECYNTALRLCA----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ +++P A+ Sbjct: 66 EQGLIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALLHYKEAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMGDVQAALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAVISYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|119964111|ref|YP_948835.1| O-antigen polymerase family protein [Arthrobacter aurescens TC1] gi|119950970|gb|ABM09881.1| putative O-antigen polymerase family protein [Arthrobacter aurescens TC1] Length = 601 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 82/306 (26%), Gaps = 79/306 (25%) Query: 2 LRLIRYFFVISLVICSFIIVSH--YPEDVSIT-----------------WGNRLYRTSPF 42 LRL + + ++ F +++H P V++ R Sbjct: 348 LRLFLFGALAAVCGYGFALMTHFTSPGTVALVCVLAGAILATAPVQEKAAAGRRTTVPAP 407 Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102 V S+ L IL + P L R NI Sbjct: 408 VRFSVAGLALVGAIL--SGVAASAELPMKSGTDLSAR------------------GNIQQ 447 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQI---ALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A K + + V LL Q + A Sbjct: 448 ATKAFEAAKALRPWDQD--VDLLAAQAFAVRAVQGDSPAA-------------------- 485 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 ++A +A+ A++ + + A+ + + A L+++ + Sbjct: 486 -----------DAAVTWASAAVERNRSSMEALSALAIGQLGTGDVEAAEKTLDRQIDRSP 534 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + R L A+ DM + D + L A ++ + + KA Sbjct: 535 ----WTSEPYLLRGLAKANGQDMAGAIADVESAAALTPKPKRALSILSELYVVSGQPEKA 590 Query: 280 EVILEK 285 + EK Sbjct: 591 AEVEEK 596 >gi|71909710|ref|YP_287297.1| response regulator receiver:tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] gi|71849331|gb|AAZ48827.1| Response regulator receiver:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] Length = 572 Score = 43.0 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 72/248 (29%), Gaps = 34/248 (13%) Query: 134 RQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + + A E +L R A L G L+ A++ A + +P+ Sbjct: 201 GRTSEAEEVFRRVL---EGRVVPWAKMGLAMALRDRGALDEAEQLAEQVTQDTPEYLSAY 257 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + + A L + +A N R L+ + N D +Y IE Sbjct: 258 DFLASVHEAQGRLHEAQKTLQRG-ADASPHNTVRQRLVGDVAARNKDLLAAEKAYGKVIE 316 Query: 252 -----SLKLCDNSIMASICAAKSLISQNKK---RKAEVILEKIWKVNPHPEIAN-----I 298 SL+ D+ ++ L+ + RK +++ W+ + E+A + Sbjct: 317 RSRGSSLRTVDDF----ANLSRVLVERGDVAASRKIATEMKREWRGDKQAELAAMVTESL 372 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVES-----------LVIVSKIALEMGSIDQAHAK 347 H + L E+ V ++ G D A Sbjct: 373 CLHAEGATEKARNLVDQALALQKTIVAEAVGKDRHTSQRLAVDLAHACYAAGKEDDAGRI 432 Query: 348 AMLAMKIA 355 Sbjct: 433 MRQVAAEN 440 >gi|332992017|gb|AEF02072.1| tetratricopeptide TPR_2 [Alteromonas sp. SN2] Length = 928 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 5/93 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL-YFESCRIGDLNSAQRYATKAL 181 L L + +++ A E + +I A + + +L Y E DL A YA +AL Sbjct: 784 LLADFYLTQDEHDKAKTHYEFLSKIDALFDKATVLNNLAYIEMK--NDLPKALEYAEEAL 841 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 +SP+ P + + ++ A+ L + Sbjct: 842 SLSPNTPQILDTYGWILARQGNYTEALPNLRKA 874 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 13/166 (7%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + V A + + A T LN K A N L A+ A++ D + AI++ Sbjct: 651 KLQVSANDLTGARTSLNDAKAIAP--NSVTIALEEAKLNLRANQLDGLEKEIKAIQAK-- 706 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKR 313 NS + A K+KA + +K++PH I A+++ SE+ Sbjct: 707 APNSPEVYLLAGNFYNVTKDKQKAFSAFSRAFKLDPHTSIHAASLFQSASSESM---FIA 763 Query: 314 ALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L E + +++ L D+A KI Sbjct: 764 FEALMHPYVEKYPNAYFHKRLLADFYLTQDEHDKAKTHYEFLSKID 809 >gi|225849022|ref|YP_002729186.1| TPR domain protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225644166|gb|ACN99216.1| putative TPR domain protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 329 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 + E+ K+ ++ G ++A A+KI P+ KE + LLAQIE + ++ Sbjct: 72 RLKPTYAEAYFERGKVYIQKGEFEEAKKDLEEAVKIDPKIKEAYSLLAQIELMHGNDQKA 131 Query: 378 ILY 380 + Y Sbjct: 132 MEY 134 >gi|222053753|ref|YP_002536115.1| methyltransferase type 11 [Geobacter sp. FRC-32] gi|221563042|gb|ACM19014.1| Methyltransferase type 11 [Geobacter sp. FRC-32] Length = 686 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 6/113 (5%) Query: 171 NSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRA 226 +A+ A ALDI+P + + + L + AI K E+ N Sbjct: 33 EAAKSLAA-ALDIAPGFAAAHDKLGLILQCLGRR-EEAIAHYECAAKLSPGRPEFRNNLV 90 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 L ++ D+ + + I++L+L + + + +++ +++KA Sbjct: 91 SALAEQARHLLTVKDLAGAENTVIQALELTPDLVDLHQTLGEIYLARGEQQKA 143 >gi|254415674|ref|ZP_05029433.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177624|gb|EDX72629.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 297 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 9/204 (4%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + Q + E++LQ + A+ L R+GD+ A +++PD P Sbjct: 53 EQQDQLEEQAKGYELVLQREPQNQTALRGLLEAKLRLGDVEGAIAPLETLAELNPDQPEY 112 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYH 247 + Q + A Q + + A L I ++ A G + + Sbjct: 113 GVLLAQAKEQTGDREGAAQAYRQILASQPGDINALKGLAALYIQQNRPEAAIGLLQETIK 172 Query: 248 DAIESLKLCDNSIMAS---ICAAKSLISQNKKRKAEVILEKIWKVNPH---PEIANIYTH 301 +A + + + S + + +SQ + + I +++ + NP P +A Sbjct: 173 NAGQQNQTQPGRVDVSSVKLLLGEVYLSQQRFTETLTIYDELIEENPQDFRPVLAKALIL 232 Query: 302 LLSENTVGKLKRALRLEEINKESV 325 T + + Sbjct: 233 RQQGKTEEAKPLFTTAVSLAPQEY 256 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 59/201 (29%), Gaps = 30/201 (14%) Query: 81 YDKGYK-----------ALYTGLM--SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 KGY+ AL GL+ + ++ A + LL Sbjct: 61 QAKGYELVLQREPQNQTAL-RGLLEAKLRLGDVEGAI-APLETLAELNPDQPEYGVLL-A 117 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS--- 184 Q A + +L A+ L + +A + + + Sbjct: 118 QAKEQTGDREGAAQAYRQILASQPGDINALKGLAALYIQQNRPEAAIGLLQETIKNAGQQ 177 Query: 185 ----PDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 P V+ + + Y+ + ++ +T ++ + + R ++A++L Sbjct: 178 NQTQPGRVDVSSVKLLLGEVYLSQQRFTETLTIYDELIEENPQDFRP----VLAKALILR 233 Query: 238 DKGDMIASYHDAIESLKLCDN 258 +G + ++ L Sbjct: 234 QQGKTEEAKPLFTTAVSLAPQ 254 >gi|317494478|ref|ZP_07952891.1| cellulose synthase operon protein C [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917408|gb|EFV38754.1| cellulose synthase operon protein C [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1146 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 98/317 (30%), Gaps = 54/317 (17%) Query: 93 MSIAAHNIPLAR-----KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 ++I + + L Y + + + L +A+A + A + L Sbjct: 340 LAIQSGDKALKANQLDSAQQKYQQARGIDNTDSYAPLGLGDVAVARKDDASAERYYQQAL 399 Query: 148 QIPATREFAVYSL--------------YFESCRIGDLNS--------------------- 172 ++ +T AV L Y +S G N+ Sbjct: 400 RLDSTNSSAVRGLVGIYQRQSPAKALAYLDSLSRGQRNAMQGAINSIQSDVLQQQAQALE 459 Query: 173 -------AQRYATKALDISPDAPWVTEAVVQQYVLAK---EWSRAITFLNQKKKNAKEWN 222 A +AL +SP+ W+T + + A + RA + L Q+ + Sbjct: 460 QQQQWAGAASKLQQALKLSPNDVWLTYRLAKDLHAAGRTDDADRAFSTLAQQLPGDPQQV 519 Query: 223 RNRAILLIARSLENADKG--DMIASYHDAIESLKLCDNS-IMASICAAKSLISQNKKRKA 279 A+ L + + A D + + +L D ++ A+ L + +A Sbjct: 520 YAHALYLSSTDRDRAALALVDSLPKSKWDTDIHELSDRLHFGETLQKAQDLRDAGHEDEA 579 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 L + N ++ + E+ L + + + + + + G Sbjct: 580 ITYLRQQ-PANTQVDLTLADWAMEREDYTVALAGYRDVLLREPNNASAHLGEIEAFIAQG 638 Query: 340 SIDQAHAKAMLAMKIAP 356 ++QA ++ + P Sbjct: 639 ELEQARSQLQALQQEKP 655 >gi|296448615|ref|ZP_06890484.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b] gi|296253865|gb|EFH01023.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b] Length = 285 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 62/195 (31%), Gaps = 13/195 (6%) Query: 168 GDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD +A ++ P + ++ AI +Q ++ Sbjct: 51 GDPKAASANIESLSEVIRRNPSAEAFNTRGVAHAKVGQFQEAIADFSQAIQSDPNS---- 106 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A R+L G + D ++ + N A I A L +Q +A + L+ Sbjct: 107 AAAFTNRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQGNLDEALIDLDA 166 Query: 286 IWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 ++N PE A + H + + + + + + + + +G Sbjct: 167 AIRLN--PESAQAFHARGLIHQKRGDNLRAVTDFDNAIDRDPFAAAPYQARGESLVALGK 224 Query: 341 IDQAHAKAMLAMKIA 355 D+A A+ + Sbjct: 225 YDKAIEDFNAALNVD 239 >gi|294138897|ref|YP_003554875.1| cellulose synthase operon C protein [Shewanella violacea DSS12] gi|293325366|dbj|BAJ00097.1| cellulose synthase operon C protein, putative [Shewanella violacea DSS12] Length = 1195 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 96/297 (32%), Gaps = 45/297 (15%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q A E + +A E + LQ T L G N A + AL PD Sbjct: 228 QRANQEGKKRLARELI---LQKDPTYRAKRKGLAL--LDEGKNNQAAKQLRYALTTRPDD 282 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIA 244 P + A+ Y+ ++A+ + + + K+ ++ R+++ ++ +GD Sbjct: 283 PELLGAIGTIYLRGGNQTQALAYFKKAQELDKDPDAASKWRSLIKVSSYWAYLKQGDTAL 342 Query: 245 SYHDAIESLKL---CDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNP------ 291 + ++ L A+ A A+ + Q + ++AE + + Sbjct: 343 KENRYTDAKHLYEKSIKITPAAPDAYNGLAELALMQKQYKQAERYYQLALNRDQNNNSAL 402 Query: 292 ---------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 E+ +L +++ + + + ++AL G +D Sbjct: 403 RGRLNVALAQGELGTAIKLAEHYTPQQQLAINGKIQSLRSDQASQAI---ELALSAGDMD 459 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANS------HNTDKILYWTQSALHAMPDPL 393 QA + + P L A I D +L W A DP Sbjct: 460 QAKRSVSRLLALKP--SSPWLRADIADTLRILGNPKQADDLMLAW----DQASSDPQ 510 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 7/101 (6%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++AL ++QY A ++ L A+ + G+L +A + A +P Sbjct: 372 AELALMQKQYKQAERYYQLALNRDQNNNSALRGRLNVALAQGELGTAIKLAEH---YTPQ 428 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 + L + +A + R++ Sbjct: 429 QQLAINGKI--QSLRSD--QASQAIELALSAGDMDQAKRSV 465 >gi|225431027|ref|XP_002273357.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297735304|emb|CBI17666.3| unnamed protein product [Vitis vinifera] Length = 572 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 27/184 (14%) Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 ++K++ LIA S++ KGD + +L N + A + ++L+ Sbjct: 380 RRKQHQIPIESLSPRDLIALSVQILSKGDKDGAIPFIRMALDKDPNYVRALVVMGQTLLQ 439 Query: 273 QNKKRKAEVILEKIWKV-----NPHPE------IANIYTH---LLSENTVGKLKRALRLE 318 + + +A LE+ +P + +A+ + + T L R+ Sbjct: 440 KEQVEEASDYLERAVTKLFLIGHPTEDEVDLMILASQWAGAACVRQGKTAEGLVHLERIA 499 Query: 319 EIN-KESVESL-------VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 + + +S ++++ G +A A P + + +E+ Sbjct: 500 NLKEPDEPKSKAHYFDGLLLLASTLYREGRNAEAAKHLRKAAAYNPAYKEY-----LEEC 554 Query: 371 NSHN 374 + Sbjct: 555 ERED 558 >gi|110597764|ref|ZP_01386048.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] gi|110340671|gb|EAT59151.1| TPR repeat:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] Length = 542 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 68/230 (29%), Gaps = 39/230 (16%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-- 186 E + E ++I +L + GD + A +A+ I+PD Sbjct: 330 AYGREGETVRKIEAYRQAVRINNDFALGWINLGIAYVQNGDFDKAVDAYQQAVRINPDDA 389 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + W +V A + ++A+ + A E + R L + + D Sbjct: 390 SVWFNTGLV--CRDAGQAAKAVDAFEHAVRIAPENAQYR--LKLGEAYGLID--QRARQI 443 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 E+L++ + + W + +Y + Sbjct: 444 EAYNEALRIKQDY------------------------DDAWVS-----LGVVY-GIAGRE 473 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L IN +L + K LE + ++A ++ P Sbjct: 474 AEEREAYLKAL-RINPGHNAALFNLGKDYLEHNNREEAREIYSRLKRLNP 522 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 55/155 (35%), Gaps = 11/155 (7%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + ++ + + AI L + ++ A L IA E G+ + Sbjct: 284 PSSSDAWGYLGFAHLQKGDLALAIDALQNAIRIRPDYAHYWADLGIAYGRE----GETVR 339 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-- 302 +++++ ++ + I + + KA ++ ++N P+ A+++ + Sbjct: 340 KIEAYRQAVRINNDFALGWINLGIAYVQNGDFDKAVDAYQQAVRIN--PDDASVWFNTGL 397 Query: 303 ---LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + + I E+ + + + + Sbjct: 398 VCRDAGQAAKAVDAFEHAVRIAPENAQYRLKLGEA 432 >gi|296136520|ref|YP_003643762.1| Tetratricopeptide TPR_2 repeat protein [Thiomonas intermedia K12] gi|295796642|gb|ADG31432.1| Tetratricopeptide TPR_2 repeat protein [Thiomonas intermedia K12] Length = 334 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 29/109 (26%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E L+ A+ L + D A + +A +P + Q Sbjct: 225 EAARTAYEAALKRWPKAWIAMMGLGNLAYARKDYPQAAIHFAEAARANPSDGDPMNNLAQ 284 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A +W A + + + + A D + Sbjct: 285 ALLAAGDWKAAQGAIEVALRLGQPHPEAYRSTAAEIAKARAAALDPTQA 333 >gi|229916939|ref|YP_002885585.1| hypothetical protein EAT1b_1213 [Exiguobacterium sp. AT1b] gi|229468368|gb|ACQ70140.1| hypothetical protein EAT1b_1213 [Exiguobacterium sp. AT1b] Length = 304 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKE 203 + + T E + + S R GDL + +R A AL + P P +++ ++ + Sbjct: 210 QLSEYDETDETYLRTKARLSFRSGDLETGERLAE-ALTLYHPKVPDGYVMLIEHHMTNGD 268 Query: 204 WSRAITFLNQKKKN 217 W+ L++ ++ Sbjct: 269 WASLRPTLDRLHQH 282 >gi|167903761|ref|ZP_02490966.1| TPR domain protein [Burkholderia pseudomallei NCTC 13177] gi|167912023|ref|ZP_02499114.1| TPR domain protein [Burkholderia pseudomallei 112] gi|217421212|ref|ZP_03452717.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] gi|217396624|gb|EEC36641.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] Length = 614 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|78223878|ref|YP_385625.1| TPR repeat-containing protein [Geobacter metallireducens GS-15] gi|78195133|gb|ABB32900.1| TPR repeat protein [Geobacter metallireducens GS-15] Length = 247 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 33/181 (18%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ PD + Y+ + W A+ + N A + + + Sbjct: 86 RRAIELKPDYSEARNNLGVNYLEMQRWDDAVAQFTLVLADLFFINHEDARINLGLA--YL 143 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 KGD S +++ +I+A + + + ++ ++A Sbjct: 144 GKGDYPKSLDILRQAVATSPQNIVARVGLGRVYFAMDRN-----------------DLA- 185 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ + E+NK ++ L+ A A++IAP Sbjct: 186 -------------IQEFTKAVELNKNYQNGYYYLALAHLKGKDYVSAADAFREAIRIAPD 232 Query: 358 K 358 Sbjct: 233 S 233 >gi|326430815|gb|EGD76385.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818] Length = 809 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 89/308 (28%), Gaps = 54/308 (17%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-------- 145 +IA + LA ++ + + L L + + + + A E Sbjct: 289 AIAYYEAALAIRL--RTEGEKGENVAALYNNL-GEAYRHKGECDKAVAFYEKDLAITVET 345 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQ 197 + + + L GD + A KAL I P + Sbjct: 346 LGEKHPSTATTYNGLGTAYGDKGDYDRAIECFEKALAIYVEMLGEKHPSTASTYNNLGSA 405 Query: 198 YVLAKEWSRAITFLNQKK---------KNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y ++ +AI F + K+ + + + S D+ + Sbjct: 406 YYSKGDYDKAIAFYEKDLAITVETLGEKHPGTADSYLGLGVAYYSKSENDEAIQLYEKAL 465 Query: 249 AIESLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKV------NPHPEIANIY 299 AI+ L + + + S+ + KA + EK + HP A+ Y Sbjct: 466 AIKVETLGEKHPSTAETYNNLGNTYYSKGEYDKAIQLYEKALAITVETLGEKHPSTADTY 525 Query: 300 THLLS---------------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +L + E + + L E + + + + + G D+A Sbjct: 526 NNLGNAYSDKGEYDKAIVFYEKALAI--KVETLGEKHPSTASTHNNLGTAYADKGDYDKA 583 Query: 345 HAKAMLAM 352 A+ Sbjct: 584 IQHHETAL 591 >gi|325299985|ref|YP_004259902.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] gi|324319538|gb|ADY37429.1| Tetratricopeptide TPR_2 repeat-containing protein [Bacteroides salanitronis DSM 18170] Length = 289 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 73/215 (33%), Gaps = 18/215 (8%) Query: 164 SCRIGDLNS-AQRYATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKN 217 +C D + A++ +AL + P A++ + AI Sbjct: 47 ACAQKDSLARAEQLFREALKLDPKN--ARNALLFSNLGTVLKRQGKADEAIEAYTMALNI 104 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 +L+ R+ DKG + +Y D + L A + A + + + + Sbjct: 105 TPYA----TAILLNRAALYLDKGLLEKAYIDYCNVIDLIPEEKEARLFRAYIYMQRRQYK 160 Query: 278 KA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 +A V+L K K P I + + R +L E L + + Sbjct: 161 EARIDYNVLLGKDMKNKPAR-IGLVMLDQKEGKYIAARDRLNQLVAEYPEDASLLKMRAN 219 Query: 334 IALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367 I LE G D A A + P ++++++ I Sbjct: 220 IELEQGFADAALLDLEAASALEPDDADVYVMMGDI 254 Score = 36.5 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 5/99 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++ A LNQ E A LL R+ ++G A+ D + L + Sbjct: 189 KEGKYIAARDRLNQLVAEYPE----DASLLKMRANIELEQGFADAALLDLEAASALEPDD 244 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEIAN 297 + + Q K+R+A E ++ P P++A Sbjct: 245 ADVYVMMGDIYVQQKKRRQAREAYEHAIELGIPAPQLAE 283 >gi|304393273|ref|ZP_07375201.1| TPR repeat-containing protein [Ahrensia sp. R2A130] gi|303294280|gb|EFL88652.1| TPR repeat-containing protein [Ahrensia sp. R2A130] Length = 292 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 13/182 (7%) Query: 85 YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 Y+A L+ + + LAR Y + N Y+ + + A Sbjct: 111 YQAYSNRALLYSSQGD--LARAQADYNAALRINPNFSEAYVGRGDVYRLAGRNQQAKSDY 168 Query: 144 EMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + +QI T A Y L+ + + G A +KAL P A Y+ Sbjct: 169 DRAIQIGTTDPRAYYGRGLLFQRARQHG---PAIEDFSKALSFEDKQPQPYNARGLSYMA 225 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + A+ +N K ++ A ++L ++GD ++ + L + Sbjct: 226 QNQMQNALDDVNTALKLDADY----AEAWTNQALIYENRGDKKRAFKSYARAASLKPSYA 281 Query: 261 MA 262 A Sbjct: 282 PA 283 >gi|254481862|ref|ZP_05095105.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] gi|214037991|gb|EEB78655.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 402 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 48/349 (13%), Positives = 101/349 (28%), Gaps = 60/349 (17%) Query: 47 ILYFFLFAWILLFAVSR----FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102 + F A ++ + + R S P + KG L G Sbjct: 6 VFALFFVAIVIGWYLGRRGQAKSASAPDLPGQYY------KGLNYLLDG----KPDGAVD 55 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A V+ + + L LL + + + A + +L P+ V+ + Sbjct: 56 AFINALEVNSETLETHIALGNLLRKR-----GEVDRAIRIHQNLLARPSLPRAQVHQAHL 110 Query: 163 ESCRIGDLNSAQRYATKAL----DISP-DAPWVTEAVVQQYVLAKEWSRAITFL------ 211 E R A + L SP ++ Y +EW +AI Sbjct: 111 ELARDYISAGLLDRAERLLLDLVAESPIQRRDSQLHLLDIYQSEREWQQAIDIAVELLPR 170 Query: 212 ---------NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + + + + E D+ + E+L + S+ A Sbjct: 171 KSLLGGTAGTAADEPGQSVPVILSHYYCELAAERRQDNDLQGARQLLQEALAMDKQSVRA 230 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRALR 316 S+ + ++A L ++ + +P P + Y L E ++ Sbjct: 231 SMMLGDVEFDAGRFKQAIKALRRVRQQDPLYISESVPSLRACYRELGDEKSL-------- 282 Query: 317 LEEINK---ESVESLVIVSKIALEMGSID---QAHAKAMLAMKIAPRKE 359 L + + ++++ A ++ +D A + + P Sbjct: 283 LAYVRECLDNHPSPPLLLA-AAEDIREMDGGSTAEQFLIEQLDKMPSLR 330 >gi|241998476|ref|XP_002433881.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes scapularis] gi|215495640|gb|EEC05281.1| O-linked N-acetylglucosamine transferase, OGT, putative [Ixodes scapularis] Length = 832 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 22/175 (12%) Query: 196 QQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + Y ++ AI + K + ++ + G+ + E+L+ Sbjct: 606 RLYADEGKYKEAIRVYQEAVAKMPDHYQPQSLYNMMGEA--YFKLGEYTEAERWYKEALR 663 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HPEIANIYTHLLSENT 307 ++ I A + AK L N+ +AE + + P H Y LSE+ Sbjct: 664 AKNDHIPAHLTYAKLLSKWNRPSEAEQWFLRAKGLAPNDSSVYQH------YGQFLSES- 716 Query: 308 VGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + A L E+ + E + + + G +A A A+K+ PR+ Sbjct: 717 -DRHTEAAELYLRAAELAPDEYEIIFNAANTLRQAGRNAEAEAFYYTAVKLRPRE 770 Score = 36.8 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 26/225 (11%), Positives = 58/225 (25%), Gaps = 31/225 (13%) Query: 121 LVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +L + A + + + Y+L L A + Sbjct: 491 LANILSAH-----GKKAEAEWAYKKALTYRSNMADV-HYNLGILLQEQNRLEEALQSYKL 544 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-------NQKKKNAKEWNRNRAILLIAR 232 A+ P + + A+ + K+ K + L Sbjct: 545 AIQFRPRLAMAHLNMGLVLGIMGRKDEAVDVYRHCAQLDSAGLKDPKTHESTKISALFNL 604 Query: 233 SLENADKGDMIASYHDAIESLKLCDNS-IMASI--CAAKSLISQNKKRKAEVILEKIWKV 289 AD+G + E++ + S+ ++ + +AE ++ Sbjct: 605 GRLYADEGKYKEAIRVYQEAVAKMPDHYQPQSLYNMMGEAYFKLGEYTEAERWYKEA--- 661 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSK 333 +++ L A L + N E + +K Sbjct: 662 ----------LRAKNDHIPAHLTYAKLLSKWNRPSEAEQWFLRAK 696 >gi|124023751|ref|YP_001018058.1| SAM-binding motif-containing protein [Prochlorococcus marinus str. MIT 9303] gi|123964037|gb|ABM78793.1| SAM (and some other nucleotide) binding motif:TPR repeat [Prochlorococcus marinus str. MIT 9303] Length = 780 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 22/203 (10%) Query: 133 ERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + N A + + L P + G+++ A + K++ + P Sbjct: 37 QGNINEAQKAYQEFINSGLSDPDV----FSNFALICQSQGEIDKAIKVYKKSVKLFPGHA 92 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + A + + + + A N A L +KG + + Sbjct: 93 FSH-ANLGYLLFQ---IGMLDDAEVAIRQAIVIQPNLANAYSYLGLVLREKGRLTDAEDI 148 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305 ++++L + A + + L +Q K +AE K ++ + A+IY +L Sbjct: 149 TRKAIELQPDLADAYVNLGQILQNQGKLDEAEHTTRKAIELQD--DSASIYLNLGGILQD 206 Query: 306 -----NTVGKLKRALRLEEINKE 323 + ++A+ L+ + Sbjct: 207 QGNLTDAEANTRKAMNLQADLPD 229 >gi|148256896|ref|YP_001241481.1| SPINDLY family O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. BTAi1] gi|146409069|gb|ABQ37575.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family [Bradyrhizobium sp. BTAi1] Length = 739 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 83/274 (30%), Gaps = 12/274 (4%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 M+ A + + +E L A + A +L + Sbjct: 1 MASNVG--SRAFQNARLQKKHRKQVDE---LLPRAVAAYRAGRPAEAQAICGQILALLPE 55 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A++ L + G L+ A++ TKA++ P + K + A Sbjct: 56 HFDALHLLGVVALDSGQLDMAEQALTKAVEAEPRHAEALSNLGLALFNRKRYEEARKCQE 115 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + L G + ++ L + A +L+ Sbjct: 116 LAVALKPNL----VVALTGLGNTLMRLGRPEEAIVAHDRAIALKPDYADAYCNRGMALLP 171 Query: 273 QNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 N+ +A ++ +NP H E ++ + L I + + L Sbjct: 172 LNRNAEANQNFDRALSLNPRHMEAMFGKGLASIILRHFDDALAAFDAALAIRPRAAQVLA 231 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 ++ + G D A A A+ I PR+E+ LL Sbjct: 232 QRGRLHQQAGRFDPAMADFQAALSIDPRQEVALL 265 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 108/342 (31%), Gaps = 40/342 (11%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G++++ + + +A + + + H E L L ++Y A + E+ + + Sbjct: 64 GVVALDSGQLDMAEQALTKAVEAEPRHAEALSNL--GLALFNRKRYEEARKCQELAVALK 121 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ L R+G A +A+ + PD Y A+ Sbjct: 122 PNLVVALTGLGNTLMRLGRPEEAIVAHDRAIALKPDYA-------DAYCNRG---MALLP 171 Query: 211 LNQKKKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 LN+ + + ++R + + L + + +L + + Sbjct: 172 LNRNAEANQNFDRALSLNPRHMEAMFGKGLASIILRHFDDALAAFDAALAIRPRAAQVLA 231 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEIN 321 + + A + ++P E+A ++ +N + ++ E N Sbjct: 232 QRGRLHQQAGRFDPAMADFQAALSIDPRQEVALLGFAQLSVIRDNVAPAMDACRKVLEQN 291 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP------RKEIFLL--LAQIEQANSH 373 S + + + + G + A A+++ P +IFLL + + + Sbjct: 292 PASEVAWTWLGECFAKQGDLTTALQHFERALELKPDFGDAITAKIFLLDFMPETDFVQH- 350 Query: 374 NTDKILYWTQS-----ALHAM----PDPLWISDDGYLSSVWL 406 W A DP GY+S+ + Sbjct: 351 -QAVRRQWWSRIGAQIARRPPPLRDRDPERRLTIGYVSADFR 391 >gi|187931399|ref|YP_001891383.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] gi|187712308|gb|ACD30605.1| hypothetical membrane protein [Francisella tularensis subsp. mediasiatica FSC147] Length = 385 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+++ + ++L I + Y + + ++ + + + I + LF IL Sbjct: 1 MIKVFKLIIAVALATLVGIWATKYHCYIMLVLADKTIKMNLVAFVFITFILLFILILGVR 60 Query: 61 VSRFFLSCPAMLFHM----LHKRNYDK 83 + P +LF ++ Sbjct: 61 IIVSVFRFPYLLFSWVIGLFSVDKQER 87 >gi|92113651|ref|YP_573579.1| tetratricopeptide TPR_4 [Chromohalobacter salexigens DSM 3043] gi|91796741|gb|ABE58880.1| Tetratricopeptide TPR_4 [Chromohalobacter salexigens DSM 3043] Length = 619 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 87/273 (31%), Gaps = 9/273 (3%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + IPL M + F E L LL +IA Y A + + + Sbjct: 53 ATTPGAIPLEDPMENAPPVARGFDAEGLSTLLLAEIAGQRGDYRRAARGYLEVNERYGSV 112 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A + + D ++ A + ++ DA + V +W A+ + Sbjct: 113 ALAERATL-AARYANDSALLEQAALRWQRLADDATTPHYVLASLAVQRGDWETALA--QR 169 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + A+E + A L ++AD ++A HD I+ + + A + A+ +Q Sbjct: 170 LRIAAREPDAELAALAELAIEDDADLAPLMADLHDFIDEH---PDHLDAQLATAQLEAAQ 226 Query: 274 NKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + A+ L ++ P + L + A + + + Sbjct: 227 GDIQTADARLARLSDNADAPADVWLTRSTIALHRGALSDARRYASQGLRQFPDDSRLRLT 286 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + L G I AH + L Sbjct: 287 LVQARLADGEIAAAHDDVERLLARHDDTASLRL 319 >gi|77407837|ref|ZP_00784590.1| TPR domain protein [Streptococcus agalactiae COH1] gi|77411719|ref|ZP_00788057.1| TPR domain protein [Streptococcus agalactiae CJB111] gi|77162227|gb|EAO73200.1| TPR domain protein [Streptococcus agalactiae CJB111] gi|77173584|gb|EAO76700.1| TPR domain protein [Streptococcus agalactiae COH1] Length = 408 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 4/115 (3%) Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A EK K +P + + +L S + + KR +I E + +++I E Sbjct: 19 ANKYFEKALKNDPEEILLELGAYLESIGFLPQAKRLYD--QIRPNYPEVAINLAQIVAED 76 Query: 339 GSIDQAHAKAM-LAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 G I+QA ++ L++A + TD A DP Sbjct: 77 GDIEQAFLYLDYISEDSQEYVSALLVMADLYDMEGL-TDVAREKLLLASKLSDDP 130 >gi|330798465|ref|XP_003287273.1| hypothetical protein DICPUDRAFT_151347 [Dictyostelium purpureum] gi|325082733|gb|EGC36206.1| hypothetical protein DICPUDRAFT_151347 [Dictyostelium purpureum] Length = 580 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 39/120 (32%), Gaps = 9/120 (7%) Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + + + A++ +KAL +SP + + V+ + A+ L Sbjct: 435 MALLG----MVLANQPEEREKARKILSKALSLSPHCTDTVLTLSKLNVVEGRFQEAVDIL 490 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 N + E+ ++ + K + +L++ AS A+ + Sbjct: 491 NNQL----EYQETD-LMHTEIATVYLTKDMHEEAMIHFNSALEINPQYEPASRGLARLEM 545 >gi|301064308|ref|ZP_07204742.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300441587|gb|EFK05918.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 407 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 16/161 (9%), Positives = 51/161 (31%), Gaps = 10/161 (6%) Query: 203 EWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 +W +A + A L+ +K D+ + +++ + Sbjct: 171 DWEKAFATRQKIAMLENGSHEHILAHHLVEAGKVCQEKDDVGKARTLFNKAISTQKTCVD 230 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPH------PEIANIYTHLLSENTVGKLKRAL 315 A + + + +KA + +++ ++ P + Y + + V Sbjct: 231 AYLHLGDLHFRKQEYKKAIAVWKRVAEIAPQFTFLAYGRLEGAYNEMKNLEPVEDF--LK 288 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +N + + +++ ++ A + A+ + P Sbjct: 289 ECARLNPD-AFTHTALARYLYNKNDMEGALREINNALSLDP 328 >gi|294340648|emb|CAZ89040.1| conserved hypothetical protein; putative exported protein; putative TPR repeat [Thiomonas sp. 3As] Length = 334 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 29/109 (26%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E L+ A+ L + D A + +A +P + Q Sbjct: 225 EAARTAYEAALKRWPKAWIAMMGLGNLAYARKDYPRAAIHFAEAARANPSDGDPMNNLAQ 284 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A +W A + + + + A D + Sbjct: 285 ALLAAGDWKAAQGAIEVALRLGQPHPEAYRSTAAEIAKARAAALDPTQA 333 >gi|291570877|dbj|BAI93149.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 748 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G++ A +A+ ++P W+ + + L AI + E Sbjct: 266 LATGEIEEAIANYREAIRLNPQLSWLYQKLGHALKLVGNIDEAIVSYEKAIALKPELIWL 325 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 IL + +K IE+LK + I A +K L ++ Sbjct: 326 YDIL----AQLLTEKERWQEVQDLCIEALKRKPDFIKAYHHLSKILKNRG 371 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 9/190 (4%) Query: 116 FHNEYLVYLL---EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + +L QI + ++ A + E ++I + + Y L + Sbjct: 180 LNYPAQSDVLYHNLGQIFGQQERWEEAVKCYERAIEINPNQFYYYYGLAQVLKTQEKWSE 239 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 +A+ + PD W+ + + E AI + A N + L Sbjct: 240 LIPVCRQAIALKPDVDWLYMNLGDSLLATGEIEEAI----ANYREAIRLNPQLSWLYQKL 295 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 G++ + +++ L I A+ L + + ++ + + + K Sbjct: 296 GHALKLVGNIDEAIVSYEKAIALKPELIWLYDILAQLLTEKERWQEVQDLCIEALKRK-- 353 Query: 293 PEIANIYTHL 302 P+ Y HL Sbjct: 354 PDFIKAYHHL 363 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 93/294 (31%), Gaps = 42/294 (14%) Query: 118 NEYLVYLLEVQI--ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 ++ L Q L R + A E L+I + + +L GD A+ Sbjct: 11 QPEVIR-LHEQAVLYLNARNWAEAINCCEEALKIDSNFALSYQTLGTIRQLQGDYVGAEC 69 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 AL I+P+ V + Y + W+ AI + + + L + Sbjct: 70 CYHSALKIAPNFAEVHANLGSLYAKNQRWNEAINAYERAIEIRPDMGGVYRNL----AKV 125 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-------KRKAEVILEKIWK 288 G+ + +++ + A K ++ +A I EK Sbjct: 126 FRQCGEPERATEYWCKAI-----LVSADGVRFKDYLNLGNELQQQQQLEEAIAIYEKGIL 180 Query: 289 VNP-------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P H + I+ E +K R EIN ++++ Sbjct: 181 NYPAQSDVLYH-NLGQIF--GQQERWEEAVKCYERAIEINPNQFYYYYGLAQVLKTQEKW 237 Query: 342 DQAHAKAMLAMKIAPRKE-IFL-----LLA--QIEQANSHNTDKIL-----YWT 382 + A+ + P + +++ LLA +IE+A ++ + I W Sbjct: 238 SELIPVCRQAIALKPDVDWLYMNLGDSLLATGEIEEAIANYREAIRLNPQLSWL 291 >gi|284051626|ref|ZP_06381836.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca] Length = 547 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G++ A +A+ ++P W+ + + L AI + E Sbjct: 65 LATGEIEEAIANYREAIRLNPQLSWLYQKLGHALKLVGNIDEAIVSYEKAIALKPELIWL 124 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 IL + +K IE+LK + I A +K L ++ Sbjct: 125 YDIL----AQLLTEKERWQEVQDLCIEALKRKPDFIKAYHHLSKILKNRG 170 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 4/102 (3%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPD 186 LA + A E + P + +Y + ++ G+++ A KA+ + P+ Sbjct: 63 SLLATGEIEEAIANYREAIRLNP--QLSWLYQKLGHALKLVGNIDEAIVSYEKAIALKPE 120 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 W+ + + Q + W + K ++ + L Sbjct: 121 LIWLYDILAQLLTEKERWQEVQDLCIEALKRKPDFIKAYHHL 162 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 6/168 (3%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ A + E ++I + + Y L + +A+ + PD W+ + Sbjct: 1 RWEEAVKCYERAIEINPNQFYYYYGLAQVLKTQEKWSELIPVCRQAIALKPDVDWLYMNL 60 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + E AI + A N + L G++ + +++ Sbjct: 61 GDSLLATGEIEEAI----ANYREAIRLNPQLSWLYQKLGHALKLVGNIDEAIVSYEKAIA 116 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 L I A+ L + + ++ + + + K P+ Y HL Sbjct: 117 LKPELIWLYDILAQLLTEKERWQEVQDLCIEALKRK--PDFIKAYHHL 162 >gi|167563649|ref|ZP_02356565.1| TPR domain protein [Burkholderia oklahomensis EO147] Length = 614 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + E L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + A+ Sbjct: 143 LGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGRTDEAVAHFRAALAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + +L L +A A +L + + R A Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAEALPAFESALALQPRFPLALFGLANALAALGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L A L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPAHSLAQMH 312 >gi|163802571|ref|ZP_02196463.1| short chain dehydrogenase [Vibrio sp. AND4] gi|159173654|gb|EDP58473.1| short chain dehydrogenase [Vibrio sp. AND4] Length = 1253 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 38/295 (12%), Positives = 95/295 (32%), Gaps = 42/295 (14%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A +++ T+ +A SL + +A + +AL + Sbjct: 401 GEFKQAESLYHKAIRVDTTQPYAFTSLGALYLSQNNYLAADKAYIQALKLDQLNGSALRG 460 Query: 194 VVQQYVLAKEWSRAITFLNQ-----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + ++W A + K+ A++ N ++ +++AR + D Sbjct: 461 RLDVRIEQQDWVGAELIAQRFSPAQKQVVAEKINGIQSEIILARLRTAIAQNDQAVMQSA 520 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L S + A + S K++A+ ++ K K + PE+ + L++++ Sbjct: 521 VEALIALKPTSPWLRLDVASMVRSMGNKQRADALMAKWAKSSSDPEMKFAHALYLAKDSK 580 Query: 309 GKLKRALRLEEINKESVESLVI------VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + LE + E + ++++ L+ D + Sbjct: 581 V-VAAISELESV----PEKALTPSMQRNLTRLKLDAELQDIQRRYLEEPQSVQ------- 628 Query: 363 LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL-----------SSVWL 406 A++ ++ + A W+ D + S W Sbjct: 629 --AKLHALEQDYQGQVQA-LARLVGA-----WVEADQVVEAERIYRSLKQSPHWS 675 >gi|158314614|ref|YP_001507122.1| tetratricopeptide TPR_4 [Frankia sp. EAN1pec] gi|158110019|gb|ABW12216.1| Tetratricopeptide TPR_4 [Frankia sp. EAN1pec] Length = 1024 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 56/201 (27%), Gaps = 39/201 (19%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 AA + AR + ++ + V + A + A +++ML++ Sbjct: 546 AAAGDGEAARVLSQQRTRAGDLEDAADVL----RPAADAGDWRAAARLIDLMLEVDDLDG 601 Query: 155 FAVYS----------------------LYFESCRIGDLNSAQRYAT---KA-------LD 182 A + GD +A A KA Sbjct: 602 LAARAEKGDKEAAVALALRLAEAGDVDQLRARADTGDPAAAGTLAEILAKAGDVDELRAR 661 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADK 239 W + + + V A + + AI L ++ E + A L + + Sbjct: 662 AGAGDIWAADWLAELLVNAGDRAGAIAVLRAAARDGVEEVKDVDQLAWLRACLAEVLLET 721 Query: 240 GDMIASYHDAIESLKLCDNSI 260 GD + + +++ Sbjct: 722 GDHDGAIAVMRAADMSDPDAV 742 >gi|157961897|ref|YP_001501931.1| tetratricopeptide repeat-containing protein [Shewanella pealeana ATCC 700345] gi|157846897|gb|ABV87396.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345] Length = 386 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 85/250 (34%), Gaps = 32/250 (12%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + + ++ P R+ A+ L + G + A+ ++ + Sbjct: 83 GEVDRSIRIHQNLIARPSLTTEQRDIAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEE 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ Y + K+W +AI + + K+K E + A + E D + + Sbjct: 143 SETQLIAIYQVTKDWQKAIDIIKKLKRKRQHELKHDSAHFYCELANEAEDDALKLKNLQL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 AI+ C A + A+ + Q + + + +EK + L+ + + Sbjct: 203 AIKQDSQCAR---ALLTLAEQYLKQEEFKSCKQAIEK---------LLTTDIDLVP-DAL 249 Query: 309 GKLKRALRLEEINKESVESL-------------VIVSKIALEMGSIDQAHAKAMLAMKIA 355 K A L + E L + +++ +E G A M + Sbjct: 250 AIAKEAYLLTNDSTGYQELLREAIEKGAGASVTITLAQHMIEQGHPKDAEKLIMEGLIRH 309 Query: 356 PRKEIFL-LL 364 P + F L+ Sbjct: 310 PTMKSFQHLM 319 >gi|327292887|ref|XP_003231141.1| pre-mRNA splicing factor CLF1 [Trichophyton rubrum CBS 118892] gi|326466771|gb|EGD92224.1| pre-mRNA splicing factor CLF1 [Trichophyton rubrum CBS 118892] Length = 681 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 78/242 (32%), Gaps = 24/242 (9%) Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183 ++Y A + L P ++ A+ S Y + GD + + + + Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237 +P + + + + + R + + + W R + + E Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376 Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D + E LKL + A+ I Q A L + + P Sbjct: 377 ENEDAERARQIYTECLKLIPHKKFTFAKIWLLKAEFEIRQLDLVLARKTLGQAIGMCPKD 436 Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ Y + E + + K + + N E+ + +++ + +++A A L Sbjct: 437 KLFRGYIDIERKLFEFSRCR-KLFEKQIQWNPSQSEAWIKFAELERGLDDVERARAIYEL 495 Query: 351 AM 352 + Sbjct: 496 GI 497 >gi|326431070|gb|EGD76640.1| tetratricopeptide protein, variant [Salpingoeca sp. ATCC 50818] Length = 753 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 68/224 (30%), Gaps = 39/224 (17%) Query: 168 GDLNSAQRYATKALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--- 216 G+ A + AL I P+ + Y ++ +AI F + Sbjct: 270 GEYAKAIQQYENALAIRLETLGEKHPNTADTYNNLGSVYSSEGQYDKAIHFHEKALAIRV 329 Query: 217 -NAKEWNRNRAILLIARSLENADKGDMIAS-----YHDAIESLKLCDNSIMASICA---A 267 E + A + L KGD + AI + L + + Sbjct: 330 ETLGEKHSRTASAYLGLGLAYQRKGDYDKAIHFHEKDLAITAEVLGEKHPSTADTYNNLG 389 Query: 268 KSLISQNKKRKAEVILEKIWKV------NPHPEIANIYTHLLS--ENTVGKLK------- 312 + S+ + KA EK + HP A+ Y +L S ++ K Sbjct: 390 IAYRSKGEYGKAIDYYEKALAIRVKALGEKHPSTADTYNNLGSAYDDKGDYDKAIALYAK 449 Query: 313 ----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 R L + + + S + + G D+A A A+ Sbjct: 450 ALAIRVETLGQKHPSTANSYLGLGIANYSKGDYDKAIAFYEKAL 493 Score = 36.8 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 28/106 (26%), Gaps = 20/106 (18%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVY---------SLYFESCRIGDLNSAQRYAT 178 + Y+ A + + T L + GD + A + Sbjct: 433 AYDDKGDYDKAIALYAKALAIRVET--LGQKHPSTANSYLGLGIANYSKGDYDKAIAFYE 490 Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 KAL I P + + Y E+ +AI + Sbjct: 491 KALAITVVVLGEKHPSTATTYNNLGEAYHSKGEYEKAIELYEKALA 536 >gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424] gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 1276 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 15/196 (7%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G A + KAL+++ + + ++ A++ ++ + + A Sbjct: 66 GKHQEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNY----AE 121 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L R + ++L+L N A +L + ++A +K Sbjct: 122 ALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKAL 181 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGS 340 ++NP+ +A Y + +GKL+R + E+N + E + + Sbjct: 182 ELNPNNAVAWNYRGV----ALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLER 237 Query: 341 IDQAHAKAMLAMKIAP 356 +A A+K+ P Sbjct: 238 YQEALQSYEKALKLNP 253 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 13/214 (6%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A ++ +A+ ++P+ + + A ++ K N A Sbjct: 408 YEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNP--NHAEAWYN 465 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +L ++ + +++KL N A +L + ++A ++ K+ Sbjct: 466 QGVALGKLER--YQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKL 523 Query: 290 NPHPEIANI-----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 N P A + E + + ++N E+ + +A Sbjct: 524 N--PNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEA 581 Query: 345 HAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTD 376 A+++ P + +F +E+ + Sbjct: 582 LQSYDKAIQLNPNYAEALFNRGVALERLERYEEA 615 >gi|260804501|ref|XP_002597126.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae] gi|229282389|gb|EEN53138.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae] Length = 989 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 10/212 (4%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMM 146 + G + + N A K+ + + Q H + V RQ A + + Sbjct: 294 VGRGFLLVNEGNYDEAIKLFNTILQLHPMTYKAYVG--RGTAYAMTRQLLKAEADFTQAL 351 Query: 147 LQIP-ATREFAVYS-----LYFESCRIGDLNSAQRYATKA-LDISPDAPWVTEAVVQQYV 199 P T + L E I DLN AQ +DI + + +A Sbjct: 352 TLEPKETEIWKRRGQVRAALGQEGQAIEDLNRAQSICKVVDVDIQKEVGLIYQAKGDNVS 411 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++RA L K+K + L A L G + + +L L + Sbjct: 412 ALMHFTRADKVLLVKQKQGELDKSQAKTLWNAMGLCQNSLGYCMDAVVTYQRALNLDPDF 471 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A++ +KA+ + + +++P Sbjct: 472 RESIVNMAQAYKDYGNFQKADELFARALRLDP 503 >gi|145553124|ref|XP_001462237.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430075|emb|CAK94864.1| unnamed protein product [Paramecium tetraurelia] Length = 2950 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 65/170 (38%), Gaps = 7/170 (4%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 D A + KAL I+PD + Y + +++ A+ + K+ + Sbjct: 2783 NDFEEAVLHYQKALSINPDKIECYYNLGNTYCIMEKFEEALECFERVVKDDP----KHSA 2838 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + D + ++++L ++ A+ I + A+ L++ Sbjct: 2839 AFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVAQLYIEKGDLNAAKRHLDESM 2898 Query: 288 KVNP-HPEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKI 334 ++ P +P+ Y + N +++A + +++ + E+ ++ ++ Sbjct: 2899 RLQPRNPDTLVRYANYYYQIGNYKEAIQKAKQTLALDEANDEAKSLIREL 2948 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 29/208 (13%) Query: 165 CRIGDLNSAQRYATKALDIS-------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++G+ A+R +A+D + W + K+ I L++ + Sbjct: 2436 QKLGEFEKAERTYRRAIDANNKDYLPYYKLGW-------MQIKNKQLKEGIDNLSKAQ-- 2486 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK---LCDNSIMASICAAKSLISQN 274 ++ I+ + SL D+ D A I K + + + A++ + Sbjct: 2487 TLDYQNMDIIIKLGESLMIYDE-DPTAVDEAVIVLHKGMIVDPLNYECTNALARAYEKKG 2545 Query: 275 KKRKAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 A + P H + +Y + ++ + L IN E E+L Sbjct: 2546 DLVNAIKYGKLA-TEQPNSNSNSHYFLGTLY--MKKKDFKSAAESFRTLLRINNEHPEAL 2602 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + I+ G+ ++A A+K +P Sbjct: 2603 IEYATISSIQGNFEKAKKYLKHALKSSP 2630 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 2/126 (1%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E E +++ A Y+ + D +A +Y KA+++ P+ V Q Sbjct: 2820 EEALECFERVVKDDPKHSAAFYNYANTFFVLQDYENAAKYFEKAVELQPENVDWRNYVAQ 2879 Query: 197 QYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAI-ESLK 254 Y+ + + A L++ + + + + N + A A+ E+ Sbjct: 2880 LYIEKGDLNAAKRHLDESMRLQPRNPDTLVRYANYYYQIGNYKEAIQKAKQTLALDEAND 2939 Query: 255 LCDNSI 260 + I Sbjct: 2940 EAKSLI 2945 >gi|157369783|ref|YP_001477772.1| AAA ATPase [Serratia proteamaculans 568] gi|157321547|gb|ABV40644.1| AAA ATPase [Serratia proteamaculans 568] Length = 778 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 4/118 (3%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++ + N +Y +E+ +L + + A A E Sbjct: 549 MLYDAQTNIRHSSHDKAYEILVEAHRLAPDYFEVARIMAYFYQKSGNLSDARSQYELAIV 608 Query: 289 VNP-HPEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++P P++ + EN + + ++++ESVE + +++ L D Sbjct: 609 LSPNTPQLHYWFGRFLLHEEENIDDAIVQFEIAHKLDEESVEVSLDLARAYLFQYEFD 666 >gi|115350208|ref|YP_772047.1| hypothetical protein Bamb_0152 [Burkholderia ambifaria AMMD] gi|115280196|gb|ABI85713.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria AMMD] Length = 828 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 88/277 (31%), Gaps = 18/277 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL L A + A+ ++ + ++ L + ++ Sbjct: 6 QALQEALTHHQAGRLGEAKTLYDAILHAQ-PGQPDAMHFLGLLACQLKQYDAGLALMERS 64 Query: 146 MLQIPATR-EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + + P + ++ E R+ D A + +A+ + PD P + A++ Sbjct: 65 LAERPDASYFNNLGNMLRECGRLDD---AIAHYRRAVALRPDYPEAHNNLGNALRDARDP 121 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 + A+ ++ + + A D G++ A+ +++ A Sbjct: 122 AEAMRSCSRAIELRPGY----AEAYNNLGNVLQDLGELDAAAASYGKAIAFHPAYAEAHS 177 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEE 319 L +Q + A V + ++NP H +A + + R Sbjct: 178 NLGNVLRAQERHADAIVHYRRAIELNPALRVAHRGLAIALRATDDFDGALEHAR----AG 233 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + E ++ + M D A A +I P Sbjct: 234 LEPDDAEGHCMLGRSLRSMNDFDGAARLFERACEIDP 270 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 21/275 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A + H + E L +L Q ++ A +++ Sbjct: 153 GELDAAAASYGKAIAFHPAYAEAHSNLGNVLRAQ-----ERHADAIVHYRRAIELNPALR 207 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A L D + A +A + PD + + ++ A + Sbjct: 208 VAHRGLAIALRATDDFDGALEHAR--AGLEPDDAEGHCMLGRSLRSMNDFDGAARLFERA 265 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + A +G+ S +++L A + + + Sbjct: 266 CEIDPGY----APAWCRLGELRCQQGEYEESLRLCRHAIELDPELADAYNFLGLAYHNLD 321 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 + +E+ +NP H +A L + R + E+ + V+ + Sbjct: 322 RMAASELSHRHAIDLNPDDADAHHNLAAALFRLDKLDEAMSEYRIAQ--ELGVDPVKIQL 379 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + I A A A++ P + LL Sbjct: 380 TLGDILWAKRDFSGAVAAFREAVEHDPHRAYARLL 414 >gi|295426286|ref|ZP_06818946.1| tetratricopeptide repeat family protein [Lactobacillus amylolyticus DSM 11664] gi|295064025|gb|EFG54973.1| tetratricopeptide repeat family protein [Lactobacillus amylolyticus DSM 11664] Length = 421 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 15/216 (6%) Query: 157 VYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + SL ++ G +A+ +AL ++P+ V + + + ++ A+ Sbjct: 104 LESLLVQADYYQTNGLFETAKDKLLQALKLAPEEDAVKFGLAELEFNSGQYEEALAHYKD 163 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K + + LI R + K I+ I + A ++S Sbjct: 164 LIKRQDTFGE---VNLIQRLFQTEAKLGQYEEASQVIKKHSNAILDIDSKYQAGLVMLSV 220 Query: 274 NKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 +A L+++ +P +P +A Y H ++ V L+ A N E E+L Sbjct: 221 GDDDQAIKYLDEVIDQSPDYVNAYPLLAQAYQHKHDDDQV--LRSAQAGLAYN-ELDETL 277 Query: 329 VIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + + A + A ++IAP L Sbjct: 278 YSMGAMAAANLQDFKTAEDLLQKGLEIAPDNSDLRL 313 >gi|71656661|ref|XP_816874.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70882031|gb|EAN95023.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1355 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 56/308 (18%) Query: 97 AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-------MLQ 148 + ++ A+ M + H +LL QI ++A + LE M Sbjct: 515 SGDLNRAQTMITKSIRHVHVLPE---AFLLSAQICQYIGNASLASQALEQALTLDFDMKD 571 Query: 149 IPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPWVTE--AVVQQ 197 P + + Y + L A + + + P P + + Sbjct: 572 QPQYNLLHGIVLGMMNKYQNAL--EALQLALKLTKEKSRVTTKGRPLQPLSLQDHVSLYL 629 Query: 198 YVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD---A 249 + ++ A L + KE ++ A MIA+ D A Sbjct: 630 QLAQTYLRLRDTEEARATLVEATAMFKE---------TTQAGRVAIANAMIAARTDMDKA 680 Query: 250 IESLKLCDN----SIMASICAAKSL--ISQNKKRKA---EVILEKIWKVNPHPEIANIYT 300 +E LK A A QN+ A E ++E++ + ++ YT Sbjct: 681 VEILKQVPPRSEFFTAAKTRMANLYLTYRQNRHMYANCFEELVEEVPTAQSYFQLGEAYT 740 Query: 301 HL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 ++ E + +RA ++ E+ E V + + + +A A+ A Sbjct: 741 NIQEPEKAIAAYERAK---AMDPENAELAVRIGRALVSTHDYQRAVRYYRDAV--ASDGV 795 Query: 360 IFLLLAQI 367 F +LA + Sbjct: 796 NFTVLADL 803 >gi|296188918|ref|XP_002806517.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR repeat-containing protein 4-like [Callithrix jacchus] Length = 612 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 8/123 (6%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ V + +W A + ADKG+ A+ E++ Sbjct: 454 MLRCVVRSGQWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 509 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 510 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 565 Query: 314 ALR 316 Sbjct: 566 FEA 568 >gi|291484681|dbj|BAI85756.1| hypothetical protein BSNT_03360 [Bacillus subtilis subsp. natto BEST195] Length = 423 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 16/253 (6%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC 165 + + NE ++ ++ A+ Y A + + + V+ ES Sbjct: 122 QKLLQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESL 181 Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ A + KA+D +PD + A + + + ++ + KE + + Sbjct: 182 SASGEFEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPS 236 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L + S +G + A E ++ + + + AAK + K + + +L+ Sbjct: 237 YTSLYMPLSKSYEAEGVYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQ 296 Query: 285 KIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++P H +A + E+ + + +E + ++ E+ Sbjct: 297 EALALDPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTEL 353 Query: 339 GSIDQAHAKAMLA 351 ++A A Sbjct: 354 EQYEEAKQSFEAA 366 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 5/127 (3%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LI +++ + G+ + ++ K + A AA+ KA ++ + Sbjct: 3 TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLYYEWGDVEKAISLISDLH 60 Query: 288 KVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ E+ N Y LL + L + E + ESL++++ + G + + Sbjct: 61 DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS 120 Query: 345 HAKAMLA 351 K + A Sbjct: 121 EQKLLQA 127 >gi|225438920|ref|XP_002279290.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1068 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 31/160 (19%) Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + ++WS+AI L+ + LE D ++L+ Sbjct: 11 LAKLCSCRDWSKAIRVLDSLLAQSCVIQDICNRAFCYSKLELHKH-----VIRDCDKALQ 65 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 L + A I +L + KK A ++ W+ Y H + ++ LK+ Sbjct: 66 LEPTLLQAYILKGHALSALGKKEDALLV----WE--------QGYGHAVRQSAD--LKQF 111 Query: 315 LRLEEINKES------------VESLVIVSKIALEMGSID 342 L LEE+ K++ ES + VS+ AL + Sbjct: 112 LELEELLKQNRRITCENHAMESPESSISVSESALHVNEKP 151 >gi|219129766|ref|XP_002185052.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403547|gb|EEC43499.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 175 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 1/95 (1%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ + D +A+ + + LD+ P + A +W RA L Q + Sbjct: 28 IQAAQKEDYTTARHHYQQGLDLVPRHADLLVAYGSLEANQGKWDRAQQLLQQALEVDATH 87 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 R L R + + A+ +L+ Sbjct: 88 VNARRYLEEIRQAVALRQRRSGLADKSAV-ALRDA 121 >gi|196016267|ref|XP_002117987.1| hypothetical protein TRIADDRAFT_62008 [Trichoplax adhaerens] gi|190579460|gb|EDV19555.1| hypothetical protein TRIADDRAFT_62008 [Trichoplax adhaerens] Length = 1752 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 31/189 (16%) Query: 201 AKEWSRAITFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ A++ N+ + + I + S D+ I + I+ Sbjct: 447 QGKYDDALSTYNKSLATQQVQLGDDHPDVAVTSSNIGQVYSSQGKYDEAHSILTKSLKIQ 506 Query: 252 SLKLCDNSIMASICA---AKSLISQNKKRKAEVILEKIWKVN------PHPEIANIYTHL 302 +L D+ +I A + K A IL K K+ HP++A Y+ + Sbjct: 507 QAQLDDDHPSIAITRNNIASVYQHEGKYDNALSILNKSLKIQRAKLGDNHPDVAKTYSSI 566 Query: 303 LS--------ENTVGKLK-----RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 E+ + L R + + + + ++ + G D A + Sbjct: 567 GQIYDYQGKYEDALSALNKSLDIRIAQFGDNHPSIATTYTSIASVYYHQGKYDDALSMHN 626 Query: 350 LAMKIAPRK 358 +++KI + Sbjct: 627 ISLKIQETQ 635 >gi|182677850|ref|YP_001831996.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633733|gb|ACB94507.1| Tetratricopeptide TPR_2 repeat protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 572 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 46/170 (27%), Gaps = 4/170 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL + + M L + I +Q A + E + Sbjct: 269 GLGAAGSRQGDELAAMIYLRLSLFLAPENSLAIITLGDIYERIKQNERAIDVYETVPDDD 328 Query: 151 ATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 R A E+ G A +Y + ++ P A+ K+++ AI Sbjct: 329 PLRITADIQSGQILEAL--GRTEEANKYLKRIVEEHPKDSDALSALGNLQRAHKQYAEAI 386 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 Q + + L R + + D +L L + Sbjct: 387 ETYTQALAATSKPEKANWPLYYFRGISYERNKQWPQAEADFRRALALFPD 436 >gi|119510065|ref|ZP_01629205.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414] gi|119465252|gb|EAW46149.1| hypothetical protein N9414_19622 [Nodularia spumigena CCY9414] Length = 219 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 58/165 (35%), Gaps = 4/165 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G +++ + + ++ + T E + + + ++ + A E L +++ Sbjct: 31 GKVAVNSPELVK-SRVEKLAQSRGTPEEERSQLIQQAKTLSSQGDFTGAEENLRTLIKKF 89 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 F + L R A + +A+ ++ + + Y W AI Sbjct: 90 PRYAFGHFELGNVLFRQEKPEEAIKAYREAIRLNSNHALAYNGIGLVYASQSLWEEAIAA 149 Query: 211 LNQKKKNAKEWNRNRAILLIARS-LENADKGDMIASYHDAIESLK 254 + + + A+ A + L+ + + IAS A++ K Sbjct: 150 YQKALEINPNYG--DALANSAVAFLQTNQESEGIASLEKALDVFK 192 >gi|78067598|ref|YP_370367.1| TPR repeat-containing protein [Burkholderia sp. 383] gi|77968343|gb|ABB09723.1| TPR repeat protein [Burkholderia sp. 383] Length = 607 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 84/223 (37%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + A +A++ V + + L KN + NR A L IAR Sbjct: 169 ARELARATGETRGPAILALQALL---VRGSDRVGGLAVLKDMLKN--DLNRPEAQLAIAR 223 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D D + ++L++ + + A++ L +A I V + Sbjct: 224 QQLAVDDKD--GAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D+A Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDEATVF 337 Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LAQI +++ + W Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 91/276 (32%), Gaps = 26/276 (9%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ A A + + + + ++ + + + A ML Sbjct: 120 IALGAQ--SPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQP----MLARELA 173 Query: 153 REFA-VYS---LYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 R L ++ R D L + P A+ +Q + + Sbjct: 174 RATGETRGPAILALQALLVRGSDRVGGLAVLKDMLKNDLNRPEAQLAIARQQLAVDDKDG 233 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q + ++ L+ + A++ IAS+ ++ + A + Sbjct: 234 AAQSLKQALQIRPDY---LPAALMLSQMGPAERAAGIASFEKYVQQNPKSRD---ARLAL 287 Query: 267 AKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEI 320 ++ ++ ++ A+ E + K +P P +A + + LK+ ++L + Sbjct: 288 SQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDEATVFLKQYVQLGDK 347 Query: 321 NKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + +++IA++ + QA + Sbjct: 348 QPNLDVGQGYIYLAQIAIDQNNDAQASQWLDKVDQT 383 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 10/154 (6%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A +L D +++ + + +S AS A L+ K Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161 Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A+ +L + P +A + + VG L + + + E+ + Sbjct: 162 ADAQPMLARELARATGETRGPA-ILALQALLVRGSDRVGGLAVLKDMLKNDLNRPEAQLA 220 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +++ L + D A A++I P L+ Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQIRPDYLPAALM 254 >gi|225575069|ref|ZP_03783679.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM 10507] gi|225037739|gb|EEG47985.1| hypothetical protein RUMHYD_03158 [Blautia hydrogenotrophica DSM 10507] Length = 346 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 83/242 (34%), Gaps = 19/242 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + L + Y A + + ++ + + S ++GD A Y +AL Sbjct: 30 QARKDLDQGAYEEAVQGFQEAMERDVHKAESCRGAGIASLKLGDYEEAADYFEQALSQKG 89 Query: 186 DAPWVTEAVVQQYVLA----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + V+ A ++ A + +++ +A +++ D Sbjct: 90 LDKGFRKDVLSYQATAQYKNGQYEDAQKTSESLLELSEDAQSCYLAGRVALAVD-----D 144 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIA 296 + + + ++ A ++ + + + V LE+ K +P E Sbjct: 145 YDLAKENFQKVIEEDSGYQQAVQIY-EAYLERGMEADGTVYLEQALKTSPSDAKGRCEQG 203 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 IY ++ + KR E ++ + E+++ + ++ L ++ A A ++ Sbjct: 204 KIYYYMEDFDNAE--KRLS--EAVDGGNTEAMIFLGEVYLSKNDLESARASYEDYIQEEE 259 Query: 357 RK 358 Sbjct: 260 DA 261 >gi|83311235|ref|YP_421499.1| TPR repeat-containing protein [Magnetospirillum magneticum AMB-1] gi|82946076|dbj|BAE50940.1| TPR repeat [Magnetospirillum magneticum AMB-1] Length = 548 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 17/236 (7%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A +A + E ML I A++ L + R GD A K + P Sbjct: 17 AFNGGNLEMAAAECERMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRIQ 76 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + + +S A + + + + L R L D+ Sbjct: 77 AVITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRLDEA------AA 130 Query: 249 AIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEIA------NIYTH 301 +E + D S+ A +Q + +A LE+ +++P +A + Sbjct: 131 VLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQLDPGHSMAYNNLGVALQAQ 190 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +E + L+R L L + E + E A A A+ + P Sbjct: 191 DRTEEAISVLERGLAL---QPDDPELHYSLGCSLQEATRTADATASYRRAIALRPD 243 >gi|307728385|ref|YP_003905609.1| TPR repeat-containing protein [Burkholderia sp. CCGE1003] gi|307582920|gb|ADN56318.1| TPR repeat-containing protein [Burkholderia sp. CCGE1003] Length = 613 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 104/324 (32%), Gaps = 56/324 (17%) Query: 110 VSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYF 162 +Q N L +L ++AL Q A++ + + A + + Sbjct: 69 ADEQKALPNVQLTSQIVFQVLAAEVALQRNQPAPAYQTYLALARDTHDPRMAQRATEIAL 128 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + D +A + +P++ + VL+ + A L ++ N Sbjct: 129 AAQSPSDALAAAQLWQ---QYAPNSERAAQLDASLLVLSGKPDDAEPLLARELARVPADN 185 Query: 223 RNRAILLI--------------------------------ARSLENADKGDMIASYHDAI 250 R AIL + A + + D ++ Sbjct: 186 RGNAILALQLLLSRGPNRVGGLHVLQDMLKNDMNRPEAQLAIARQQLVADDAPGAHKSLQ 245 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPE-IANIYTHLLSENT 307 ++L L + + A++ ++ ++++ LEK + NP H +A +L S+ Sbjct: 246 QALALKPDYLPAALMLSQMGPE--ERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRL 303 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH-------AKAMLAMKIAPRKEI 360 K+ + + N + L+ ++ I ++ + A +A P + Sbjct: 304 DDAQKQFEVMHKANASDLTPLMALALIKIQQKNFTDAQGYLTQYAQQAEKTPGADPGQ-A 362 Query: 361 FLLLAQIEQANSHNTDKILYWTQS 384 ++ LAQ+ N W Sbjct: 363 YIYLAQV-SLEQKNEAAAADWLSK 385 >gi|170693985|ref|ZP_02885141.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia graminis C4D1M] gi|170141057|gb|EDT09229.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia graminis C4D1M] Length = 542 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 71/232 (30%), Gaps = 32/232 (13%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P ++ Q + + AI + RA + +L+ AD+ Sbjct: 40 HPLDEDSLTSLTQNLIEQQRLGDAIEL--ASIIAQLDSGNARAHFRLGYALQVADRHGEA 97 Query: 244 ASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + +L L S A +S R+ +LE+ V HP+ N +T+L Sbjct: 98 VAP--YRRALALEPTLPSLRSNLAGALSLSNGDLREQTALLEQA--VLAHPDDGNAWTNL 153 Query: 303 LSE-----NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + G L+ R + S + + E D A A A +AP Sbjct: 154 ANAYRQNLDLSGSLEAGERAVQCAPSSALAHNNYALALREAQRWDAALQAAETACTLAPD 213 Query: 358 ---KEIFLLLAQIEQANSHNTDKILYWTQSALH------------AMPDPLW 394 L + Q+ + + N W A P P W Sbjct: 214 HAGMRSNLSMLQLMRGDYAN-----GWLSHEARWSGSSELRGNRPAFPAPTW 260 >gi|308802594|ref|XP_003078610.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri] gi|116057063|emb|CAL51490.1| COG0457: FOG: TPR repeat (ISS) [Ostreococcus tauri] Length = 1474 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 10/225 (4%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + + A+ L GDL A +A ++++I+ + Sbjct: 568 DDAEAVCSRIAERNHLSADALQGLGIARACAGDLEYAHAFAHRSVNIA-STSQRQITLAN 626 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y+ +AI + + AI + GD ++ + +L Sbjct: 627 IYLSQGHTEKAIALFDIAIRRDPVS----AIGHFNIGNAHFMSGDWASARTSYLAALDRE 682 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A A L +A+ +++ ++ ++ +Y L +G+ K+A Sbjct: 683 PHYYKALYNLAMLLDVTGFIAEAKDTMKRAVEIR-RSDVRGVYAMGLLYVKLGQWKKAEE 741 Query: 317 LEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + I+ + S V + +A G + A A + A++ Sbjct: 742 QFKNALLIDDKHAMSHVKLGNLAFRRGEFEFAGALYLNALESDST 786 >gi|76811375|ref|YP_334393.1| TPR domain-containing protein [Burkholderia pseudomallei 1710b] gi|76580828|gb|ABA50303.1| TPR domain protein [Burkholderia pseudomallei 1710b] Length = 626 Score = 43.0 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 95 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 154 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 155 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 214 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 215 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 270 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 271 LPHYERAVGLDP 282 >gi|319795626|ref|YP_004157266.1| hypothetical protein [Variovorax paradoxus EPS] gi|315598089|gb|ADU39155.1| tetratricopeptide domain protein [Variovorax paradoxus EPS] Length = 615 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 31/238 (13%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN----EYLVYLLEVQIALA 132 KR + Y AL LA + + E L + L Sbjct: 359 RKRGVTQAYLALSQ-----------LAERRKDLTGAERWLSRIDSTEDLTIAQTRRAGLL 407 Query: 133 E--RQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E + + + A L ++ + +A +A +PD Sbjct: 408 ARQGKLPQAREIIRALPERTADDKKQKFLAEVQLLRDAKQ---YQAAYDMLAQASAAAPD 464 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIA 244 + V Q ++A++ +R + + + + + A + S + K + Sbjct: 465 D---GDLVYDQAMVAEKLNR-LDDMERLLRRLIQLKPESQNAYNALGYSFAD-RKIRLDE 519 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + ++++L + +A ILE +K P PEI + + Sbjct: 520 ARTLIQKAVQLAPEDPFIADSLGWVEFRLGNTAEAIRILEAAYKTRPDPEIGAHFGEV 577 >gi|215694797|dbj|BAG89988.1| unnamed protein product [Oryza sativa Japonica Group] Length = 930 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 463 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 521 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 522 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 578 Query: 212 NQ 213 + Sbjct: 579 EE 580 >gi|149391327|gb|ABR25681.1| unknown [Oryza sativa Indica Group] Length = 222 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 7 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 65 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 66 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 122 Query: 212 NQ 213 + Sbjct: 123 EE 124 >gi|125531299|gb|EAY77864.1| hypothetical protein OsI_32907 [Oryza sativa Indica Group] Length = 1089 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 622 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 681 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 737 Query: 212 NQ 213 + Sbjct: 738 EE 739 >gi|115481316|ref|NP_001064251.1| Os10g0181200 [Oryza sativa Japonica Group] gi|113638860|dbj|BAF26165.1| Os10g0181200 [Oryza sativa Japonica Group] Length = 1021 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 554 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 612 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 613 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 669 Query: 212 NQ 213 + Sbjct: 670 EE 671 >gi|110288708|gb|ABG65944.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group] Length = 377 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 31 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 89 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 90 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 146 Query: 212 NQ 213 + Sbjct: 147 EE 148 >gi|110288710|gb|AAP52447.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group] gi|215694798|dbj|BAG89989.1| unnamed protein product [Oryza sativa Japonica Group] Length = 735 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 268 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 327 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 383 Query: 212 NQ 213 + Sbjct: 384 EE 385 >gi|110288709|gb|ABG65945.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group] gi|110288711|gb|ABG65946.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group] Length = 614 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 268 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 326 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 327 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 383 Query: 212 NQ 213 + Sbjct: 384 EE 385 >gi|86741850|ref|YP_482250.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3] gi|86568712|gb|ABD12521.1| hypothetical protein Francci3_3164 [Frankia sp. CcI3] Length = 233 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 2/102 (1%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y G+ + + A ++ ++ V + QY A E Sbjct: 116 YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALARAQFTAGQYGAARETFA 173 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++ T ++A + L + +IGDL +A + A+ + PD Sbjct: 174 WIVDRHPTDDYAQFGLGLSARKIGDLRAAVEHLALAVAMRPD 215 >gi|18642701|gb|AAL76193.1|AC092173_5 Putative crp1 protein [Oryza sativa Japonica Group] Length = 1089 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 622 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 680 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 681 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 737 Query: 212 NQ 213 + Sbjct: 738 EE 739 >gi|116623336|ref|YP_825492.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226498|gb|ABJ85207.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 248 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 7/161 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ++ A ++ + + L A + A +L++ AV Sbjct: 77 GDLAHAVAALRQSAELRPGNERTVSTL--ALALDAMGRKADAAAAYREVLELNPINGIAV 134 Query: 158 YSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L Y + GDL+ A + A +AL++ PD P V++ + Y+ + +RA + Sbjct: 135 NNLAYILAENGGDLDDALQLARRALELLPDLPEVSDTLGWIYLKKNQAARAAEIFS-GLV 193 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 ++ + + GD A+ + +LKL Sbjct: 194 EKHPFDISY---HYRLGMALTQLGDNFAASGELRAALKLNP 231 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 14/177 (7%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 L A+ QY A + + L+ P L R GDL A Sbjct: 28 SRLEAGNAAVRAGQYEQAIAAFQALIPDLRDPEAAGDLFLRLGETYRRNGDLAHAVAALR 87 Query: 179 KALDISPDAPWVTEAV---VQQYVLAKEWSRA-ITFLNQKKKNAKEWNRNRAILLIARSL 234 ++ ++ P + + + + A L N N IL Sbjct: 88 QSAELRPGNERTVSTLALALDAMGRKADAAAAYREVLELNPINGIAVNNLAYILA----- 142 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + GD+ + A +L+L + S + +N+ +A I + + +P Sbjct: 143 --ENGGDLDDALQLARRALELLPDLPEVSDTLGWIYLKKNQAARAAEIFSGLVEKHP 197 >gi|254443350|ref|ZP_05056826.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198257658|gb|EDY81966.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 607 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 80/248 (32%), Gaps = 19/248 (7%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 + + + L+ Q+ L +A + P + + L+ + Sbjct: 254 RELKDIFAVQDEIAGLIAKQLQLELGVSTVAKK-----TVNPEAHDAYLKGLFNHAKETK 308 Query: 169 D-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR--AITFLNQKKKNAKEW---- 221 A + +AL+ P+ A+ Y+ W+ + + A++ Sbjct: 309 AGYEKAIEFYEQALEKDPNYASANAAMSWSYLTLGWWAHLPPREVFPKARVAAQKALELD 368 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N N + +++ + D + + + +L+L N A Q + + Sbjct: 369 NANAQAHITLGAIKMIYEFDWVGADKEFKRALELSPNDSQAHNMVGWVYRIQGEHEASMK 428 Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +++P +A + + + R+ E++ + + +S+ Sbjct: 429 AFRTALELDPLNVLANFQVGRAFFFARQYDQA--IAHYHRMLELHPNHFSTHLFLSQAYR 486 Query: 337 EMGSIDQA 344 E G ++A Sbjct: 487 EKGMYEEA 494 >gi|13471855|ref|NP_103422.1| hypothetical protein mll1962 [Mesorhizobium loti MAFF303099] gi|14022599|dbj|BAB49208.1| mll1962 [Mesorhizobium loti MAFF303099] Length = 159 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 P+A M +Y + L VQ +A + Y A +L + Q ++ VY+L Sbjct: 25 PVATIMPAYAVDDIEGADAP--DLTAVQAKIAAKDYKGALAELRDLAQDN--QQADVYNL 80 Query: 161 YFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + R GD+ +A Y KAL++ PD E + + YV + ++A L +K Sbjct: 81 LGFTLRKTGDVTTALTYYNKALELKPDHKAAREYLGELYVETGDMNKAKEQLASLQK 137 >gi|89099189|ref|ZP_01172067.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911] gi|89086035|gb|EAR65158.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911] Length = 522 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 25/72 (34%) Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + Y L R L + + ++ I+ +A A A+++ Sbjct: 441 LLLSYLELERGEAEKARNRLEELVAEQPDLDGAYYYLAVISYNEQDTAKAKEYAEQAIEL 500 Query: 355 APRKEIFLLLAQ 366 P +E + LL + Sbjct: 501 NPSEEGYRLLLE 512 >gi|170596782|ref|XP_001902893.1| LD47713p [Brugia malayi] gi|158589143|gb|EDP28258.1| LD47713p, putative [Brugia malayi] Length = 367 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 6/89 (6%) Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE-- 318 A++ AA +Q KAE+I++ + P HP+I Y L+ E + A L Sbjct: 116 AALKAAIQSRTQGNMEKAELIIQHALALAPHHPDILTEY-GLVVEMGRKNVVEAEELYSR 174 Query: 319 --EINKESVESLVIVSKIALEMGSIDQAH 345 N E+L+ ++ + ID+ Sbjct: 175 ALSYNPHHPEALIRRARTLPIVEEIDREM 203 >gi|149173479|ref|ZP_01852109.1| TPR repeat [Planctomyces maris DSM 8797] gi|148847661|gb|EDL61994.1| TPR repeat [Planctomyces maris DSM 8797] Length = 441 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 88/283 (31%), Gaps = 27/283 (9%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDL 170 L + Q A E L+ + Q+ T E E+ Sbjct: 70 AYELDRQNAETLLTLARAQRRTNQVEDAVETLKKLFQLSGQTEELQREQWLVEAQVGDLK 129 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 N Q A +D +A + E V +L ++ A + + + E + Sbjct: 130 NLEQHLADMLIDPRGNAADICETFVNSCILNYRFADAQRVIEVWQADFPE----DPLPHY 185 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + +G+ + + +LKL I ++ A+ +SQN+ A I ++ Sbjct: 186 YQGRILEHQGNWNQAETEFNAALKLSPEHIPSAYNLARIKLSQNQVDAALEIYQRC-LQQ 244 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI-------------------- 330 H A + + + A ++ ++ E+ ++ Sbjct: 245 QHQHAAALLGMARCLSMQQDVAAARKILNQVQQMPENQIMKDFREVGDPAYAARNAVALQ 304 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANS 372 ++ L G+ QA A+ + P+ L LA + Sbjct: 305 RGQLELSAGNYQQAITNLETAVSLNPKDRKARLSLADAYRGLG 347 >gi|51101256|gb|AAT95430.1| intraflagellar transport particle protein 140 [Chlamydomonas reinhardtii] Length = 1384 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 47/221 (21%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM----MLQIPA 151 A A ++ + H + Q + A + E ++++P Sbjct: 801 ACGQWDKALEVAEKNDRIHLKS----THYAYGQFMERQGDMEGARKHYEAAGCGLVEVPR 856 Query: 152 T-----REFAVYSLYFES--------------CRIGDLNSAQRYATKALDISPDAPWVTE 192 + + + Y ++ +G+ A KA D + Sbjct: 857 MLFEAEKFTELQN-YIQANDSRELILWWGKYLESLGEYAKALDCYRKAGD--------SL 907 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++V+ + ++W A + NA ++ R R E + Y + Sbjct: 908 SMVRIHCFQRDWKAAEDEVTNSADNAASFHLARQYEASGRIPEAIRYYTLAKRYSHGVRL 967 Query: 253 LK----------LCDNSIMASIC-AAKSLISQNKKRKAEVI 282 K L S A + A L ++ + KA + Sbjct: 968 AKTHELDSDLMNLALKSTPAVMIDTADYLFAKGQHEKAATL 1008 >gi|116621976|ref|YP_824132.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225138|gb|ABJ83847.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 283 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 63/170 (37%), Gaps = 19/170 (11%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-----KEWSRAITFLNQKKKNAKEWN 222 G + A++ +A ++PD + + Y+ A +A +Q + Sbjct: 106 GYASKARQNFERATQLNPDNLDAQSDLFEYYLEAPGFLGGGLEKARATADQMSRINPAEG 165 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A + + + ++ +++ + + I A+ Q + ++A+ Sbjct: 166 HW------ALAKLAEKRKEYSSAEDQLRRAIEAAPHQVGRFIDLARLFTKQGRYQEADQS 219 Query: 283 LEKIWKVNPH-PEI----ANIYTHLLSENTVGK--LKRALRLEEINKESV 325 L K ++ P+ P++ A++Y V + LK+ L L + + Sbjct: 220 LAKAEQIAPNSPKLIFAKADLYIKSKRNLGVARELLKKYLSLA-LTPDDP 268 >gi|320104179|ref|YP_004179770.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319751461|gb|ADV63221.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 976 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 87/245 (35%), Gaps = 34/245 (13%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E DL A+ +A KAL ++P P + + A L E Sbjct: 731 EHFSRRDLREARPFADKALKLNPKQPLAAYVKARLLETIGDEEAARAVLKPAL--DPENP 788 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R + L+ + G++ + + +L ++ A+ + Q ++ + Sbjct: 789 NERVVDLLGQL--EMKAGNLDEAERLFETARRLDPSNSKWIAGLARVHLRQ---KRVDAF 843 Query: 283 LEKIWKVNPHPEIANIYTH------LLSENTVGKLKR--ALRLEEINKE-------SVES 327 LE ++A + + L E L+R + KE E Sbjct: 844 LE---------DLAKLALNDADDLTLRKELAKRHLQRGEFDQAARWGKECLYIDVYDPEC 894 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN--SHNTDKILYWTQSA 385 +++ L D+A A+ +A+++ P K++ LL ++ +A + D+ + Sbjct: 895 HELLADAHLGQNQADRAVAEYKVALQLQP-KKLALLGVKLARAEWAAGQRDEARQRLDAI 953 Query: 386 LHAMP 390 L A P Sbjct: 954 LQADP 958 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 80/296 (27%), Gaps = 54/296 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK-----------LEMM 146 A + + Q N L ++ Q+ + A E + Sbjct: 137 GRWEAAAERTAQARAQD--DNHLLARWVDAQLLRETGKLEDAVNACRWFVDLQNEQAERL 194 Query: 147 LQIPATREFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 P + LYF + G+ + +L+ + + ++ W Sbjct: 195 KTDPEALLLVGQAAELYFRAEARGEDLAQ------SLNDVINVIYEQAITTDRHCWQAAW 248 Query: 205 SRAITFLNQKKKNAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLKLC 256 FL + RA+ +L + + + A A +L++ Sbjct: 249 LEGRLFLAGYNERLAMPELQRALTINPLAPEVLTTLGQADLNGYKLAAGREKAQRALEIN 308 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + + A + A IS + A E +NP ++ + + A R Sbjct: 309 PSYLPAYVLLADLNISDERFADALKAAESALAINP-----------RDQDALARYAAAQR 357 Query: 317 L--------------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L N + + + +A + A++ P + Sbjct: 358 LLLNDAAARAAELAVLADNPRPARFYAALGERLADRRKYPEAERAFLKAVEADPNQ 413 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 71/251 (28%), Gaps = 42/251 (16%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML--QIPATREFAVYSLYFESCRIG 168 + L ++ ++ A L+ L + P R + + G Sbjct: 747 KALKLNPKQPLAAYVKARLLETIGDEEAARAVLKPALDPENPNERVVDLLG--QLEMKAG 804 Query: 169 DLNSAQRYATKALDISPDAP-W-VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 +L+ A+R A + P W A V + + +A + + Sbjct: 805 NLDEAERLFETARRLDPSNSKWIAGLARVHLRQKRVD-AFLEDLAKLALNDADDLTLRKE 863 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + +G+ + E L + A + + QN+ +A + Sbjct: 864 L-----AKRHLQRGEFDQAARWGKECLYIDVYDPECHELLADAHLGQNQADRAVAEYKVA 918 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 ++ P +L + V +++ G D+A Sbjct: 919 LQLQP-----------------------KKLALLG-------VKLARAEWAAGQRDEARQ 948 Query: 347 KAMLAMKIAPR 357 + ++ P Sbjct: 949 RLDAILQADPT 959 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 61/331 (18%), Positives = 108/331 (32%), Gaps = 62/331 (18%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLE 144 AL G + + L + + E L Q AL + A E+LE Sbjct: 16 ALTLGSL-VGVGEGRLTTQAAGVWVRTIQAAQENERDQL-AQALKALQVGKTATAREQLE 73 Query: 145 MMLQIP----ATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAP---------- 188 + Q P + A + G+L+ A R +A+ +P P Sbjct: 74 ALSQSPRVHQDSDLAAEVARAQAICLRAQGELDEATRILEEAIKAAPANPDLLALLADLE 133 Query: 189 -----WVTEAVVQQYVLAKE-------WSRAITFLNQ-KKKNAKEWNRN----------- 224 W A A++ W A K ++A R Sbjct: 134 FSRGRWEAAAERTAQARAQDDNHLLARWVDAQLLRETGKLEDAVNACRWFVDLQNEQAER 193 Query: 225 -----RAILLIARSLEN-----ADKGDMIASYHDAI-----ESLKLCDNSIMASICAAKS 269 A+LL+ ++ E A D+ S +D I +++ + A+ + Sbjct: 194 LKTDPEALLLVGQAAELYFRAEARGEDLAQSLNDVINVIYEQAITTDRHCWQAAWLEGRL 253 Query: 270 LISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGKLKRALRLEEINKESVE 326 ++ +R A L++ +NP PE+ L ++A R EIN + Sbjct: 254 FLAGYNERLAMPELQRALTINPLAPEVLTTLGQADLNGYKLAAGREKAQRALEINPSYLP 313 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + V+++ + + A A A+ I PR Sbjct: 314 AYVLLADLNISDERFADALKAAESALAINPR 344 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 54/147 (36%), Gaps = 31/147 (21%) Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K ++ + + A L + E+ + D+ + A ++LKL +A+ A+ L + Sbjct: 709 SKLQDRLKADPENADLNAKMAYEHFSRRDLREARPFADKALKLNPKQPLAAYVKARLLET 768 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + A +L+ L EN ++ + ++ Sbjct: 769 IGDEEAARAVLKPA---------------LDPENPNERV----------------VDLLG 797 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKE 359 ++ ++ G++D+A A ++ P Sbjct: 798 QLEMKAGNLDEAERLFETARRLDPSNS 824 >gi|317404933|gb|EFV85300.1| hypothetical protein HMPREF0005_04328 [Achromobacter xylosoxidans C54] Length = 826 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 101/296 (34%), Gaps = 53/296 (17%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMH-----SYVSQQHTFHNEYLVYL 124 + ++G +AL G + AA A ++ + V Q F Sbjct: 526 SAWLRAQSTAWAEEGAQALEEGRLRDAA-ERICAHRLLNPDALAGVRAQRAFER---AMR 581 Query: 125 LEVQIALAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L V+ AL + + L+ ++ P A+ + +GD +A R+ +A Sbjct: 582 LGVRAALVAGNHKEVIDLTDIALDTGVEFPE--LHAMRG--RAADALGDKQTAMRHLEQA 637 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 AP+ T+ + W + + + +L + ++A + Sbjct: 638 AANE-SAPFSTQLHFARVAFNGGWFG------------EAIDAYKMVLAHGSADQSAKE- 683 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-------- 292 E+ + +I A+ ++S + A +LE++ + P Sbjct: 684 ----------EAERQLGRLGPRAIRGAREILSAGDPKAAWNLLERVAQSWPQMTEVDHEK 733 Query: 293 -PEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +A +Y S +T +L R+ ++ + L + + A+ + +QA Sbjct: 734 RRILAVLYAESRALDSSSTTERLALGERILQLVPDDPIGLRLAAVGAMRLHRFEQA 789 >gi|301758102|ref|XP_002914901.1| PREDICTED: transmembrane and TPR repeat-containing protein 4-like [Ailuropoda melanoleuca] Length = 828 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 7/133 (5%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ + + EW A + ADKG+ A+ E++ Sbjct: 541 MLRCMIRSGEWRNEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 596 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312 +L + A L +N+ ++AE +L ++ P+ A + +L + +N++ + + Sbjct: 597 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNLGIVQNSLKRFE 654 Query: 313 RALRLEEINKESV 325 A R + Sbjct: 655 AAERSYRTAIKHR 667 >gi|302775518|ref|XP_002971176.1| hypothetical protein SELMODRAFT_172051 [Selaginella moellendorffii] gi|300161158|gb|EFJ27774.1| hypothetical protein SELMODRAFT_172051 [Selaginella moellendorffii] Length = 966 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 73/234 (31%), Gaps = 24/234 (10%) Query: 163 ESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E + G + +A+ AL P + WV A +++ L+ K A Sbjct: 565 ECRKRGSIETARAIYAHALAAFPGKKSIWVKAAQLEKS------HGTRESLDSLLKRAVG 618 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +L + + E GD+ + + NS + A K + +A+ Sbjct: 619 YCPQAEVLWLMGAKEKWLAGDVEGAREILTAAYVAIPNSEEIWLAAFKLEFENREPERAK 678 Query: 281 VILEKI---------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 ++L K W + + K ++ + +++ Sbjct: 679 ILLAKARDRGCSERVWMKS-------AIVERELGKVAEERKLLEDGLKLYPSFHKLWLML 731 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 ++ +G+ + A + A++ P L A + + +A Sbjct: 732 GQLEERVGNFEAARSVYERALEKCPASTPLWLSAAQLEEKVGGISRARAMLTTA 785 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 97/301 (32%), Gaps = 45/301 (14%) Query: 129 IALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 A E + + E L+ +L+ P + E GD+ A+ T A Sbjct: 596 AAQLE-KSHGTRESLDSLLKRAVGYCPQAEVLWLMG-AKEKWLAGDVEGAREILTAAYVA 653 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK---- 239 P++ + A + +E RA L + + ++ R L + Sbjct: 654 IPNSEEIWLAAFKLEFENREPERAKILLAKARDRGCSERVWMKSAIVERELGKVAEERKL 713 Query: 240 -------------------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 G+ A+ +L+ C S + AA+ Sbjct: 714 LEDGLKLYPSFHKLWLMLGQLEERVGNFEAARSVYERALEKCPASTPLWLSAAQLEEKVG 773 Query: 275 KKRKAEVILEKI-WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVS 332 +A +L K +PE+ + +E G K A L +E +S ++ + Sbjct: 774 GISRARAMLTTARLKNRENPELWLA--AIRAETRAGNWKEADALMAKALQECRQSGLLWA 831 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT--DKILYWTQSALHAMP 390 +EM + +A K I ++ ++A + + + +K W A+ P Sbjct: 832 -ANVEM--VPRAQRKTKSFDAIKNSEQDPYVIAAVGKFFWQDRKVEKARNWMNRAVTFAP 888 Query: 391 D 391 D Sbjct: 889 D 889 Score = 37.6 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 91/227 (40%), Gaps = 30/227 (13%) Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A+ + +P W+ A +++ +A + + A +F+ +K +E +N Sbjct: 306 DIKKARLLLKSVIQTNPKHAPGWIAAARLEE--VAGKIAAARSFI---QKGCEECPKNED 360 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L + D + + ++K S+ + AA+ + K +L K Sbjct: 361 VWLEACRLASGDAAKKVIAM-----AVKSIPTSVKLWMAAARLEVENAAK---SRVLRKG 412 Query: 287 WKVNPHPE---IANIYTHLLSENTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSID 342 + P+ + L +E+ L RA + VE + ++++ + D Sbjct: 413 LEFI--PDSVRLWKAVVELANEDEARILLARATECCRL---HVELWLALARL----ETYD 463 Query: 343 QAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHA 388 +A A + P + I++ A++E+A N ++ A+ + Sbjct: 464 KARVVLNRAREALPTEPTIWIAAAKLEEAQ-GNVSRVEGIIDRAIRS 509 >gi|166713060|ref|ZP_02244267.1| histidine kinase-response regulator hybrid protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 653 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 18/203 (8%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P T V + S GD+ + A I P P V A ++ + A+ Sbjct: 70 RTLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLVATLRTLLRARR 129 Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ + + + A L + + A+ AI + L Sbjct: 130 AEEALRVSEARFREIFEHISAPIAVVDANLHTHEANAAFQRLIGNATPGVAIHAAGLDQA 189 Query: 259 SIMASICAAKSLISQNKKRKAEVIL------EKIWKVNPH--PEIANIYTHLLSENTVGK 310 S M ++ A L+ + + A +L E W+V+P+ P++ + + T + Sbjct: 190 STMHALTTA--LVQRERWSGALTLLRDGKLCETEWRVSPYREPDLGLLMVE---DVTEQR 244 Query: 311 LKRALRLEEINKESVESLVIVSK 333 L+ + +E++ + E +++ Sbjct: 245 LREREQRQELDIATSELAHQIAQ 267 >gi|319943883|ref|ZP_08018164.1| hypothetical protein HMPREF0551_1010 [Lautropia mirabilis ATCC 51599] gi|319743116|gb|EFV95522.1| hypothetical protein HMPREF0551_1010 [Lautropia mirabilis ATCC 51599] Length = 539 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 54/406 (13%), Positives = 124/406 (30%), Gaps = 46/406 (11%) Query: 1 MLR-LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 M+R I + + + +V++TW S ++L +L L Sbjct: 1 MIRNAIWLLVAFAGAVVLALFFQGNHGNVTLTWPPYQIELSSNMLLVLLIIGFLILHLAL 60 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + L P + +R + ++L +++ A ++ + V N Sbjct: 61 LLVLRTLGLPQRIRRKREQRRLQRNNRSLQEAVLAHFEGRFERAERLSAAVLAHTPEGNR 120 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYAT 178 + Q A A ++ +L + TR ++ R G N+A A Sbjct: 121 ------KDQGAAAALLAALSAHRLGNYARRDDWTR---------QAVRRGGKNAAL-MAR 164 Query: 179 KALDISPDAPW------------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAK- 219 + P E + Y A W + + + Q + K Sbjct: 165 AEFALEDHQPEKALMAVGQITAGGEQQVAALETALAGYGQAGRWDQVLETVRQLTRRGKL 224 Query: 220 ---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI-SQNK 275 E + R A + + + ++ + + + A A + + Sbjct: 225 AANEADNLRLSAYRQLLARRAGDAEALNALWKSLSADERKKGMLAAPTMTALAEANATGD 284 Query: 276 KRK-AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 R+ +L++ + + Y L + +L++ R + E L ++ +I Sbjct: 285 ARRIGIGLLDEGYDEG----VLEAYASLEALPARQRLEQLERWRLRHGEKPRLLEMLGRI 340 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 +A + ++ + LAQ+ ++ + L Sbjct: 341 CASERLWGKAEGYLVDSLLAGDSVSARVALAQLYESVGRPQEAALQ 386 >gi|289595906|ref|YP_003482602.1| TPR repeat-containing protein [Aciduliprofundum boonei T469] gi|289533693|gb|ADD08040.1| TPR repeat-containing protein [Aciduliprofundum boonei T469] Length = 467 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 10/159 (6%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D SA K +S E ++ ++ AI L + K + + N RA L Sbjct: 55 DRVSALSPKEK-KTLSRILTEAGEKMLVLK----DYEYAIKTLEKAK--SLDRNNVRAWL 107 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I R+L + + E++KL N++ A+I +L + + + A + + Sbjct: 108 DIGRNL-LERNVQIPYAVASLKEAVKLAPNNVEANILLGDALRMEGELKSALEAYFRALE 166 Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 V+P + ++ N + +N V LK+ L + E Sbjct: 167 VDPENEDVINKILKIEPDN-VEVLKKYAELLKKKGNYNE 204 >gi|159128075|gb|EDP53190.1| DnaJ and TPR domain protein [Aspergillus fumigatus A1163] Length = 522 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 58/200 (29%), Gaps = 12/200 (6%) Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173 + L L+ + LA A + + + + +G A Sbjct: 28 PDTPLSSLVASAKAHLASGSARDALLYFDAAVSRDPSNYLTIFQRG--AAYLSLGRTAQA 85 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIA 231 + L + PD + +W A+ + K + R A Sbjct: 86 LDDFDRVLQLKPDFESALLQRARLRTKTADWDGALHDFERAGKRLSDEYRETQEARDAAF 145 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK--- 288 ++ +G A ++ S+ A + + + L + + Sbjct: 146 QAFNAEKQGAWDDCVGRANTAISKASTSLSLRQTRAHCRFEKGEVEEGISDLVHVLQLSP 205 Query: 289 --VNPHPEIANIYTHLLSEN 306 + PH +I+++ + L ++ Sbjct: 206 GLIEPHLQISSMLFYALGDS 225 >gi|332711174|ref|ZP_08431107.1| hypothetical protein LYNGBM3L_61530 [Lyngbya majuscula 3L] gi|332349988|gb|EGJ29595.1| hypothetical protein LYNGBM3L_61530 [Lyngbya majuscula 3L] Length = 299 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 58/166 (34%), Gaps = 7/166 (4%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + W +A+ +Q + + + R L + + L+ G++ + +L Sbjct: 49 LADLLYKSGNWEQAVKEYDQVIQRQPQLIQVR--LKLGKLLQLM--GEVAKAIEVYESAL 104 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIY--THLLSENTVGK 310 L N + + + KA E P +P + + +N Sbjct: 105 PLSSNVATGHHIRGLIEVCRRQPEKAVKAFETAASSEPENPSHWLAWGRVEMELDNAHAA 164 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 LK ++ + + + +++ L +G A + A ++AP Sbjct: 165 LKAFEQILLLQPDDIVAMIHSYDALLILGDFQSAELRLSRAEQLAP 210 >gi|190574784|ref|YP_001972629.1| TPR repeat-containing protein [Stenotrophomonas maltophilia K279a] gi|190012706|emb|CAQ46334.1| conserved TPR repeat protein [Stenotrophomonas maltophilia K279a] Length = 296 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 6/151 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A H +Q + + LL+ Q + A + P + L Sbjct: 62 ASLAHVDAFRQRY-GDPPALRLLQADALRETGQADAAIALYHELSSGPQAAAA-AHGLGL 119 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + R D ++ +A + P + + A ++ +A L + + + Sbjct: 120 IAARRDDDGGSEEALARATQLQPLNTDYLGDLGYARLRAGQFEQAREPLAKALELSPGNA 179 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESL 253 + A L +L +GD + A ++ Sbjct: 180 KATANL----ALWAELRGDTTTAERLAGQAN 206 >gi|94967940|ref|YP_589988.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549990|gb|ABF39914.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 515 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 84/295 (28%), Gaps = 52/295 (17%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-------- 133 GY ++ IA + P A+ +H+ + N L Q + Sbjct: 210 RNGYIQDSEKILQIARPSKPTAKYLHTLARVREAQDNLPEASKLFQQALQLDPKSFDLLF 269 Query: 134 ---------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 +++ A L+ ++ R + L + A A + +S Sbjct: 270 DGARFSGQHNRWDEAVGYLQKCDEVNPDRPEVLLKLTLAYLKTRRREKAVSVARRLASVS 329 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P+ P + V + W A + + A + + + +KG++ A Sbjct: 330 PNDPNAQYILAFALVENELWETAEPMARKAVEQNP----KDANSQLLMGIIHLNKGELDA 385 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + E+L+L N A + RK Sbjct: 386 ARVSFDETLRLDPNL-----LDAHYYSALVSDRK-------------------------G 415 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + + L N + + + + L G A A A+++ P Sbjct: 416 DVDAARTE-LDALVVKNPDHANAQAELGVLRLRAGDAQGARAALEAAVRLQPEAS 469 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 12/179 (6%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 + L + + + + + ++ + ++L+L S Sbjct: 216 DSEKILQIARPSKPTAKYLHTL-----ARVREAQDNLPEASKLFQQALQLDPKSFDLLFD 270 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEI 320 A+ N+ +A L+K +VNP PE + Y + R RL + Sbjct: 271 GARFSGQHNRWDEAVGYLQKCDEVNPDRPEVLLKLTLAYLKTRRREKAVSVAR--RLASV 328 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 + + I++ +E + A A A++ P+ LL I N D Sbjct: 329 SPNDPNAQYILAFALVENELWETAEPMARKAVEQNPKDANSQLLMGIIHLNKGELDAAR 387 >gi|91774433|ref|YP_544189.1| TPR repeat-containing protein [Methylobacillus flagellatus KT] gi|91708420|gb|ABE48348.1| TPR repeat [Methylobacillus flagellatus KT] Length = 390 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 5/134 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 Y+L A A + LQ A+ + + R G A + + L Sbjct: 207 YVLTAYEAFNRGDDTAAQQAYRQALQADVRNIDALLGMAAIAARQGRTQDAVGWYQQVLQ 266 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P A+++ A S + KN A L A A++G Sbjct: 267 VEPRNSIAQTALLELQGQADPLSS-----ETQLKNLIGQQPGEAYLHAALGNHYAEQGQW 321 Query: 243 IASYHDAIESLKLC 256 + ++ L Sbjct: 322 PLAQQSYFQAHHLD 335 >gi|57096757|ref|XP_532644.1| PREDICTED: similar to CG4050-PA, isoform A [Canis familiaris] Length = 915 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324 L+ NK KA E L+ + + ++ H+ + LK R ++N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALDLNPKHK 631 Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 S +++ + E+ +A + + + P + L + + +++ Sbjct: 632 LALFNSAILMQESG-EVKLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEV 689 Query: 381 WTQSALHAMPD 391 W + A+ D Sbjct: 690 WLKKAIKLQAD 700 >gi|47230441|emb|CAF99634.1| unnamed protein product [Tetraodon nigroviridis] Length = 1210 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 37/225 (16%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G+ A + +AL I+ D P + ++ +EW + K N Sbjct: 594 ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND 653 Query: 224 NRAILLIA-----------RSLENADKGDMIASYHDAIESLKLCD-NSIMA----SICAA 267 ++L + R E +K + + L+ N A ++ A Sbjct: 654 TYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAH 712 Query: 268 KSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRL 317 K + + R+A + +W +A+IY + + LK+ Sbjct: 713 KGYYREARDVFAQVREATADISDVWLN-----LAHIYVEQKQYISAVQMYENCLKKF--- 764 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 ++ E L+ +++ + G + + + A +AP + + Sbjct: 765 --YKYQNTEVLLYLARALFKCGKLQECKQMLLKARHVAPSDTVLM 807 >gi|17158736|ref|NP_478247.1| hypothetical protein all7600 [Nostoc sp. PCC 7120] gi|17134685|dbj|BAB77243.1| all7600 [Nostoc sp. PCC 7120] Length = 225 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 6/130 (4%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L R D ++A AL ++P YV ++ +AI NQ K Sbjct: 77 LRGLAKSQLR--DFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVK 134 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + N + + + +G+ + D ++L++ N A + + Sbjct: 135 --IDPNSQDGYYNLGLA--HFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDS 190 Query: 277 RKAEVILEKI 286 + A L++ Sbjct: 191 KSAVTDLQQA 200 >gi|323449907|gb|EGB05792.1| hypothetical protein AURANDRAFT_30520 [Aureococcus anophagefferens] Length = 423 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 71/239 (29%), Gaps = 8/239 (3%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Y A L M ++ R + L D A +D +P Sbjct: 136 AADYEAAVRSLRTMRRVEPHRMAGLELLSTALWHFKDDVELCYLARHCVDFDARSPEAWC 195 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A L KE AI + + A E D + + Sbjct: 196 ASGNCLSLQKEHDGAIRCFQRAIAVDPRF----AYAYTLCGHEYVANEDFEKAIGMYRHA 251 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTVG 309 +++ + A Q K AE ++ NP + + Y + ++ Sbjct: 252 MRIDERHYNAWYGLGAIYYRQEKYELAEYHFDRALCHNPTSSVLHCYLGMTLHANQKCHD 311 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 L+ R + ++ ++ + + + + + A A+ APR + L+ ++ Sbjct: 312 ALRHLRRAALMEPKNPQARFQCANVLISLDKYEDALAELRAVSDHAPREASVHFLMGKV 370 >gi|315050180|ref|XP_003174464.1| hypothetical protein MGYG_01991 [Arthroderma gypseum CBS 118893] gi|311339779|gb|EFQ98981.1| hypothetical protein MGYG_01991 [Arthroderma gypseum CBS 118893] Length = 916 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 29/161 (18%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L E + G++++ +R +A + +P+ + A V+ + +A L+ ++ A Sbjct: 613 LAKEKWQAGEIDNTRRVLGRAFNQNPNNEDIWLAAVKLEADTNQIEQARELLSTARREAG 672 Query: 220 E--------------WNRNRAILLIARSLENADKGD-----------MIASYHDAIES-- 252 N++ A+ L+ + L+ K D A E+ Sbjct: 673 TDRVWIKSVAYERQLGNKDHALNLVNQGLQLYPKADKLWMLKGQIYESDGQLQQAREAYG 732 Query: 253 --LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + C S+ + A++ KA +L++ P Sbjct: 733 TGTRACPKSVPLWLLASRLEEKAGVVVKARSVLDRARLAVP 773 >gi|195168834|ref|XP_002025235.1| GL13341 [Drosophila persimilis] gi|194108691|gb|EDW30734.1| GL13341 [Drosophila persimilis] Length = 604 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 5/130 (3%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + F S + A A ++P V + + YV K + A T + Sbjct: 346 LRGNLFISLQR--YREAIEAFRNAQGLAPYRFEVYKGLFHCYVAQKRFKEAQTMCVWAIR 403 Query: 217 NAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + R+ + R+L + + ++ ++LK+ + A A+ + Sbjct: 404 S--FRTSPRSYTMFGRTLFHSTNPAAKRSARKFVEKALKIDSSYTPAVALMAEICQYEGA 461 Query: 276 KRKAEVILEK 285 + A +LEK Sbjct: 462 TKAAIKLLEK 471 >gi|159475992|ref|XP_001696098.1| intraflagellar transport particle protein IFT140 [Chlamydomonas reinhardtii] gi|158275269|gb|EDP01047.1| intraflagellar transport particle protein IFT140 [Chlamydomonas reinhardtii] Length = 1384 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 47/221 (21%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM----MLQIPA 151 A A ++ + H + Q + A + E ++++P Sbjct: 801 ACGQWDKALEVAEKNDRIHLKS----THYAYGQFMERQGDMEGARKHYEAAGCGLVEVPR 856 Query: 152 T-----REFAVYSLYFES--------------CRIGDLNSAQRYATKALDISPDAPWVTE 192 + + + Y ++ +G+ A KA D + Sbjct: 857 MLFEAEKFTELQN-YIQANDSRELILWWGKYLESLGEYAKALDCYRKAGD--------SL 907 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++V+ + ++W A + NA ++ R R E + Y + Sbjct: 908 SMVRIHCFQRDWKAAEDEVTNSADNAASFHLARQYEASGRIPEAIRYYTLAKRYSHGVRL 967 Query: 253 LK----------LCDNSIMASIC-AAKSLISQNKKRKAEVI 282 K L S A + A L ++ + KA + Sbjct: 968 AKTHELDSDLMNLALKSTPAVMIDTADYLFAKGQHEKAATL 1008 >gi|90022221|ref|YP_528048.1| molybdopterin converting factor subunit 1 [Saccharophagus degradans 2-40] gi|89951821|gb|ABD81836.1| peptidase M48, Ste24p [Saccharophagus degradans 2-40] Length = 503 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 1/91 (1%) Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 Y + E + ++ A Y L R G A A + + P+ + T Sbjct: 306 TNNYGEDVRRFENELRGNRFSKLAAQYGLVLSLTRAGKTERALTLAEELVAAEPENIYFT 365 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 A Y ++ A+ L +K K + Sbjct: 366 VARADVYAEKGDFETAVKALQEKLKTHPNHH 396 >gi|74152020|dbj|BAE32046.1| unnamed protein product [Mus musculus] Length = 463 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 83/255 (32%), Gaps = 37/255 (14%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + +L ++ A +E L + + + + R + Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A +AL SP + ++ + + + L Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQITQLRT 295 Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +R+ + + ++ AI E+LKL MA +C A+ ++ +AE +K Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + H+ + + R R + +K+S + + + L++ A Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405 Query: 347 KAMLAMKIAPRKEIF 361 K + A++ + + Sbjct: 406 KLLTALEKVAERRVC 420 >gi|281425004|ref|ZP_06255917.1| putative TPR domain protein [Prevotella oris F0302] gi|281400848|gb|EFB31679.1| putative TPR domain protein [Prevotella oris F0302] Length = 578 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 72/171 (42%), Gaps = 3/171 (1%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKA 180 L+ +A A + + A+ L+ +++ A Y L FES + D A Y TKA Sbjct: 40 TMFLDAILAEAADKNDSAYALLKQCIELNPNAAEAYYFLAPFESDKKNDTL-AISYLTKA 98 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 +SPD E + + Y+ A+++++AI + + +LL + + D Sbjct: 99 CALSPDNDDYQERLAEYYINAQQYAKAIDVFEALITHHSDRTDVLQVLLQLYNQQK-DYD 157 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +M+ + ++ + M+ + + + + KA L + + +P Sbjct: 158 NMLRTLARLEQNDGNSEALTMSKVHVYELKGDRKQAYKALQTLCETYPNDP 208 >gi|241764831|ref|ZP_04762836.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax delafieldii 2AN] gi|241365626|gb|EER60350.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax delafieldii 2AN] Length = 762 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 75/271 (27%), Gaps = 25/271 (9%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY-----LLEV--QIALAERQYNIAHEK 142 GL+ A + N L + +L Q LA + + A Sbjct: 66 EGLLVHGLG----ALQRRKTADGLRILENAALAHPSDCEILVALGQAKLAMGRKSAAVAA 121 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 E +L + A Y L + G ++A A P Sbjct: 122 FEQVLVMAPGHPAASYQLAMLALANGREDNALCLLRTAAANEPSWVDAQYQYGNMLRSRG 181 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 E A + + + + L ++ + + A++ L Sbjct: 182 EIHEAEKYYRLALAVQAD-HVETLVNLGGLLKDSGRFAEAVQCLERALQ---LRPELTQP 237 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH----LLSENTVGKLKRALRLE 318 + A ++Q A L+ +NP A + + +L L Sbjct: 238 AFNLAMIRVNQRMWDDASRWLQHTIAINPKQADAKYWLGNTLMGSGDVAASRLAYQSAL- 296 Query: 319 EINKESVESL--VIVSKI---ALEMGSIDQA 344 +N V++ ++++ A+ G A Sbjct: 297 RLNANYVQARWGYTMAQLPAVAVSAGEQGLA 327 >gi|157273509|gb|ABV27408.1| tetratricopeptide repeat protein [Candidatus Chloracidobacterium thermophilum] Length = 601 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 18/148 (12%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A ++P + A+ Y A ++ RAIT L K E N+++ Sbjct: 472 ERAYALAPHEGRLARALGNAYCQAGQFERAITTLEPWVK-GDETTLNQSLACYDYGYALL 530 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G + + L + A+ + R+A + PE + Sbjct: 531 ATGRPRQARPYLERAALLAPD-------DAQIWFILAEARRALRLC---------PEASA 574 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESV 325 Y + + A R ++ ++ Sbjct: 575 AYAQAR-QLAPNRADIAQRQADLAQDCP 601 >gi|109899227|ref|YP_662482.1| response regulator receiver protein [Pseudoalteromonas atlantica T6c] gi|109701508|gb|ABG41428.1| response regulator receiver protein [Pseudoalteromonas atlantica T6c] Length = 538 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 58/165 (35%), Gaps = 13/165 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + + + P ++ A L + GD ++A A +ISP + Sbjct: 215 NEDEAAEKLVLRLAFKPESQLAAYDLLMSLQIKQGDFDTALECVLMASEISPRNIRRHKT 274 Query: 194 VVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARS----LENADKGDMIASYH 247 + + ++ + + K + L +AR+ AD+ A Sbjct: 275 ALDLSRITHDYHTQLEAAKKIVKFAKNSIHDTPEHYLNVARASIDYAMTADEEQTSALVK 334 Query: 248 DAIESLKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILEK 285 A E ++ + + + A+ + ++K A+ +LE+ Sbjct: 335 QANEYIRQSRQAFPKADMQDQINVINARLMYLADEKDNAKALLEQ 379 >gi|299142170|ref|ZP_07035303.1| TPR domain-containing protein [Prevotella oris C735] gi|298576259|gb|EFI48132.1| TPR domain-containing protein [Prevotella oris C735] Length = 593 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 87/215 (40%), Gaps = 12/215 (5%) Query: 87 ALYTGLMSI------AAHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYN 137 AL +M+ A + +K+ S + + + + L+ +A A + + Sbjct: 11 ALSITMMAATAVFPSFAKHGKKQKKVVSSANMPMMSYEDSVRYNTMFLDAILAEAADKND 70 Query: 138 IAHEKLEMMLQIPATREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A+ L+ +++ A Y L FES + D A Y TKA +SPD E + + Sbjct: 71 SAYALLKQCIELNPNAAEAYYFLAPFESDKKNDTL-AISYLTKACALSPDNDDYQERLAE 129 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 Y+ A+++++AI + + +LL + + D +M+ + ++ Sbjct: 130 YYINAQQYAKAIDVFEALITHHSDRTDVLQVLLQLYNQQK-DYDNMLRTLARLEQNDGNS 188 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + M+ + + + + KA L + + +P Sbjct: 189 EALTMSKVHVYELKDDRKQAYKALQTLCETYPNDP 223 >gi|90417050|ref|ZP_01224978.1| TPR domain protein [marine gamma proteobacterium HTCC2207] gi|90331066|gb|EAS46322.1| TPR domain protein [marine gamma proteobacterium HTCC2207] Length = 683 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 54/301 (17%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---YLLEVQIAL--AERQYNIAHEKLE 144 G + +A I AR HN L+ +L L ++ Y+ +K + Sbjct: 99 RGHILMAQGEIADARASFQQA----VIHNGSLIASWQMLMTLTDLPVDQKAYDFFEDKFQ 154 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + +P V ++ E G L+ A++ L P + V Sbjct: 155 RLAALPP-ELLGVRNMMEE----GKLSKAEQLCRSFLQQHPKHIEGMRLLADLGVKTHVL 209 Query: 205 SRAITFLNQKKKNAKE------------WNRNRAILLIARSLENADKGDM---------- 242 A L E + R + L + ++ D Sbjct: 210 DDAEFILESALVYEPENQLVRFDYMNVLYKRQKFELCMEQAQVLLDADPENSKYRFSYAN 269 Query: 243 --------IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + E + ++ + + +L + + +A +++ P+ Sbjct: 270 QCVAVGRFEEALALYDEFIAADPSAAPSHLLRGHTLKTIGRIDEAVEAYRAVYRAK--PD 327 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLV--------IVSKIALEMGSIDQAHA 346 + + L + T G + L +++S + + + K + A Sbjct: 328 FGDAFWSLANLKTYGFEDAEIDLMREHQQSDSTGLDDRIHLSFALGKAMEDAKDYAAASD 387 Query: 347 K 347 Sbjct: 388 Y 388 >gi|228474051|ref|ZP_04058792.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624] gi|228274565|gb|EEK13406.1| TPR repeat protein [Capnocytophaga gingivalis ATCC 33624] Length = 996 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 73/220 (33%), Gaps = 18/220 (8%) Query: 84 GYKALYTGLMSIAAHNIPLA-----RKMHSYVSQQHTFHNEY------LVYLLEVQIALA 132 GY + + AA + +K + V+ + + QI Sbjct: 708 GYVKVSDSEIDSAAFDAAERLYVQNKKQEAKVALEKYLKDYPKGTGASQAEFYLAQIYFD 767 Query: 133 ERQYNIAHEKLEMML---QIPATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDA 187 E Q + A E +L + + + V ++Y E + K ++ + Sbjct: 768 ENQKDKALPLYEKVLAQGRNEYSEQVLVRLSNIYLEKEDTDKVLPLLEEIEKTSSVAQNL 827 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + +++ + KE ++AI + + NR + + + GD + Sbjct: 828 IFARSNLMKAFYKKKEHAKAIVYAKKILAEKGADNRLKNDARVIMARAYMATGDEAEAEK 887 Query: 248 DAIESLKLCDNSIMASICAAKSLI--SQNKKRKAEVILEK 285 E K +++MA + + +K+ +++K Sbjct: 888 QYAEVRKTASDALMAEALYYDAYFKNKAGQYKKSNEVVQK 927 >gi|168044085|ref|XP_001774513.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674225|gb|EDQ60737.1| predicted protein [Physcomitrella patens subsp. patens] Length = 932 Score = 43.0 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 73/211 (34%), Gaps = 18/211 (8%) Query: 151 ATREFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 + Y + + GD++ A Y + A+++ P+ + ++ A Sbjct: 72 EPKFAECYGNMANALKEKGDIDLAILYYSAAIELKPNFCDAWSNLASAFMRKGRLQEAAE 131 Query: 210 FLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 + + N LL A+ L + +Y +E+++L +A Sbjct: 132 CCQHALILNPRLVDAHSNLGNLLKAQGLTHH-------AYLCYVEAIRLQPTFAIAWSNL 184 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 A L+ + +KA ++ ++ P H + N+ + + R ++ Sbjct: 185 AGLLMEAGELQKALTYYKEAIRLKPSFVDAHLNLGNVLKAMNRH--QEAIACYNRSIQLR 242 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + ++ + E G +D A A+ Sbjct: 243 PDYAIAYGNLASVYYEQGLLDHAIVHYKQAL 273 >gi|325845190|ref|ZP_08168498.1| tetratricopeptide repeat protein [Turicibacter sp. HGF1] gi|325488786|gb|EGC91187.1| tetratricopeptide repeat protein [Turicibacter sp. HGF1] Length = 416 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 74/206 (35%), Gaps = 23/206 (11%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + ++ D A++ + ++ P + + + Y+ +++ +A+ + + + E+N Sbjct: 212 AYQLNDEVEAKKVFQELKELDPSYDTIYPILAKIYLKEEDYEKALEMVAEGMTHN-EYN- 269 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + D A+ E+L L + +++ + + + + + Sbjct: 270 --AELYSIKGTALEKLKDFEAARDAYYEALNLDPEDLESALRSNRICLMLEDYEEVVHNI 327 Query: 284 EK-----------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + W ++A Y L + + + +++E L + Sbjct: 328 KHYEENGLYDDHFTW------DLAIAYLELEEYDEAK--ACFEQGAALFADNIEFLFDYA 379 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358 + +E G ++A +++ P Sbjct: 380 QFLIEEGLSNEAIKLLERILQLDPSA 405 >gi|322699593|gb|EFY91353.1| 20S cyclosome subunit (BimA/Nuc2/Cdc27), putative [Metarhizium acridum CQMa 102] Length = 818 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 91/268 (33%), Gaps = 20/268 (7%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDIS 184 Q A Y A + M +R + ++ + R DL+ A + +D + Sbjct: 553 QAA-----YAEAEKFFRRMRVQAPSRLQDMEVYSTILWHLKRETDLS---FLAHELVDSA 604 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 +P AV + LA++ +A+ + + ++ A + E+ + Sbjct: 605 WHSPQAWCAVGNAWSLARDPEQALRCFKRATQLDPKF----AYAFTLQGHEHVTNEEYDK 660 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + +++ A + KA +NP+ + + Sbjct: 661 ALTAYRQAIGADRRHYNAYYGIGRVQERLGAYEKAYDHYYAAQTINPNNAVLICCMGGVL 720 Query: 305 ENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360 E V L + E+ + ++ ++ L +G I+ A + M+ +AP + Sbjct: 721 EKQKQMVQALHAYTKAAELAPRAAQTRYKKARALLTVGQIEAAQKELMILKDLAPDEATV 780 Query: 361 FLLLAQIEQANSHNTDKILYWT-QSALH 387 LL + + + + ++T AL Sbjct: 781 HFLLGTLYRNTNERQLAVRHFTIALALD 808 >gi|302546589|ref|ZP_07298931.1| putative tetratricopeptide repeat protein [Streptomyces hygroscopicus ATCC 53653] gi|302464207|gb|EFL27300.1| putative tetratricopeptide repeat protein [Streptomyces himastatinicus ATCC 53653] Length = 429 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 15/234 (6%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E R D ++A A A + P P + + L + A L + + + Sbjct: 145 LVELGRYKDASAA---AEHADSVRPGIP-IFTRLAYVKELRGDPEGAREVLERA-RESAT 199 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + A + + +G A+ +L+ + A ++ ++++ A Sbjct: 200 SPSDIAYVSTSLGQLAFGQGRYDAARSAFHTALRAAPGYLPALEYRGRTAAAEDRLGAAV 259 Query: 281 VILEKIWKVNPHP----EIANIY-THLLSENTVGKLKRALR-LEEINKESVESLVIVSKI 334 LEK+ + +P P + Y +E + + V + + + + Sbjct: 260 RDLEKVVRSSPLPAQLAALGEAYEARGDAEKAKQQYAVVDTWITLARANGVATDLDSALV 319 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 A + G + +A A LA N + +A A Sbjct: 320 AADHGDVKEALKAARAEWDRRQTVHTADALAWALHRNGKD----REALTAAKRA 369 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 60/205 (29%), Gaps = 15/205 (7%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++A+ AL +P E + A+ L + +++ Sbjct: 211 LGQLAFGQGRYDAARSAFHTALRAAPGYLPALEYRGRTAAAEDRLGAAVRDLEKVVRSSP 270 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHD----AIESLKLCDNSIMASICAAKSLISQNK 275 + A+ + +A+K + D + + + A + A Sbjct: 271 LPAQLAALGEAYEARGDAEKAKQQYAVVDTWITLARANGVATDLDSALVAA-----DHGD 325 Query: 276 KRKAEVILEKIWKVNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 ++A W H A + + L A R + + + Sbjct: 326 VKEALKAARAEWDRRQTVHTADALAWALHRNGKDREALTAAKR--AAEPGYRNAAFLYHR 383 Query: 334 IALE--MGSIDQAHAKAMLAMKIAP 356 +E +G D A A+ + P Sbjct: 384 GMIEKSLGEEDAARDHLAEALDLNP 408 >gi|115377212|ref|ZP_01464424.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|310821207|ref|YP_003953565.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115365795|gb|EAU64818.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|309394279|gb|ADO71738.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 1707 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+GDL A + AL+ P + + + A L + + +K+ Sbjct: 963 RLGDLERAAQLYQSALEAQPHCLPALMGARRVQLKQGNPTAARATLEAEARVSKDSRSAV 1022 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-----ICAAKS----LISQNKK 276 + A L + D+ + ++L+ + +A+ + A + L + +++ Sbjct: 1023 EAFIAAAKLSTSKLQDLDGAAALYRQALERDPLNAVATTGLEDLLAQRGGTADLAALHER 1082 Query: 277 RKAEVILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 R ++++ + A +Y L + L R + ++L + ++ Sbjct: 1083 RGEARLVKRDVSAAAASFVSGAKLYLTALDDRAKA-LALVDRALYAHPSYPDALELKGRL 1141 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIF 361 L+ +A + ++ + Sbjct: 1142 LLDAQQYAEAASALAQRVQQGGDPRLL 1168 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 33/106 (31%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 D A + L +SP +A+ + Y W+ I + + A + + Sbjct: 609 KDRAGAITVYERVLALSPSYLPALKALGRLYAQEGRWNELIKMYRAEAEIASTTEQASTL 668 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + L + E+L L + A A+ SQ Sbjct: 669 IYKIGELYEHRLKSENEAIASYQEALTLAPSYFPALRALARIYRSQ 714 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 22/227 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + A ++ V + L L L Q E ++N + +I +T E A Sbjct: 610 DRAGAITVYERVLALSPSYLPALKALGRLYAQ----EGRWNELIKMYRAEAEIASTTEQA 665 Query: 157 VYSLYFESC----RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 +Y R+ N A +AL ++P A+ + Y W I L Sbjct: 666 STLIYKIGELYEHRLKSENEAIASYQEALTLAPSYFPALRALARIYRSQSAWESLIEVLR 725 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSL 270 + N + L A ++ + E L++ + A+ A + Sbjct: 726 AEAANRIDPTERANALFQAAAIWEDQLQRPELAIEGYQEVLRVAPSH--AASLRALERLY 783 Query: 271 ISQNKKRKAEVILEKIWKVNPHP--------EIANIYTHLLSENTVG 309 ++Q+ ++ IL++ +V P ++A +Y E T Sbjct: 784 VTQDNTKELVAILDRETQVGHSPGAKVAAYLKLARLYLDRFQEPTRA 830 >gi|40849926|gb|AAR95675.1| plectin 10 [Mus musculus] Length = 4550 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1404 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1463 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1464 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1523 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1524 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1564 >gi|330972812|gb|EGH72878.1| TPR repeat-containing protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 556 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F + LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217 SA A +P A Q A + ++ ++ + + Sbjct: 84 SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143 Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + + +L + ++L GD S +E + I Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + D+A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 Score = 36.8 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 74/205 (36%), Gaps = 7/205 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L + ++ N A K S + +YL+E + + Q + + L L Sbjct: 340 LRQADILVSNGNGAEAAKRLSEARAEE-PDYAIQLYLIEAETLTSNDQLDRGWQVLNQAL 398 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206 + +Y+ + + DL ++ + P+ A+ +S Sbjct: 399 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYSE 458 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + + K + + +L + N G++ + ++L+ + +A+ Sbjct: 459 ARDLIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 513 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 + L ++ ++R+A+ + K + P Sbjct: 514 GEVLWAKGEQREAKKVWAKALEQQP 538 >gi|303326342|ref|ZP_07356785.1| TPR domain protein/response regulator receiver domain protein [Desulfovibrio sp. 3_1_syn3] gi|302864258|gb|EFL87189.1| TPR domain protein/response regulator receiver domain protein [Desulfovibrio sp. 3_1_syn3] Length = 454 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 78/204 (38%), Gaps = 18/204 (8%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 L + K + +L AR+L +G+ + + ++L L NS A + Sbjct: 134 GVQALLEKIALTIKPHGKLGRVLEWARAL--MAQGEHLRALQVCKQALDLKANSAAALLL 191 Query: 266 AAKSLISQNKKRKAEVILEKIWKV-----NPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 + + KA E + P ++A +Y + NT +L+ RL+ + Sbjct: 192 IGDVFRAMRQYDKACEAYENASRTSAMYLEPLRKMAEVYAE--TGNTAKRLECLERLDGL 249 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHN 374 + +VE + + +I L+M + A AM ++ R+ + +A + + Sbjct: 250 SPLNVERKLTLGEIYLQMNRPENARKIFDQAMTLSDREATEYISGVAFRVADV--YMDKD 307 Query: 375 TDKILYWTQSALHAMPDPLWISDD 398 + + Q L A W ++D Sbjct: 308 PQTAVAFLQRGLEAKRG-FWGTED 330 >gi|302186446|ref|ZP_07263119.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae 642] Length = 556 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F + LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217 SA A +P A Q A + ++ ++ + + Sbjct: 84 SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143 Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + + +L + ++L GD S +E + I Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + D+A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|284052246|ref|ZP_06382456.1| tetratricopeptide TPR_2 [Arthrospira platensis str. Paraca] Length = 751 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 73/225 (32%), Gaps = 35/225 (15%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +++ A + + A + L ++ A KA+ I PD W Sbjct: 31 AGKWSEAVSAFQKAIAYHPQLFLAHHKLGLGLMQLNQPAEAVSAFEKAIAIQPDFSWSHH 90 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + + + A++ + ++ L + + D+ +Y AI+ Sbjct: 91 HLGEAFQALNQPALAVSAFRKAIAINPDFC-WSYYQLAKAATQLQQWEDVADAYPKAIQ- 148 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L + + + +K+L N+ W+ ++ +Y +LS+ Sbjct: 149 --LKSDFLEFYLGLSKALFELNR-----------WE-----DLVKLYPLILSQ------- 183 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ +++ +E D A ++ P Sbjct: 184 --------QPDFIKHYYSLAETLIEQECWDAALVIYETIIEHNPS 220 >gi|229588281|ref|YP_002870400.1| hypothetical protein PFLU0735 [Pseudomonas fluorescens SBW25] gi|229360147|emb|CAY47004.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 574 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 80/229 (34%), Gaps = 36/229 (15%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + + +G +A + +PD A Q A + ++ ++ + + + Sbjct: 91 FRIAEYLGADQAALDTSMIWAKNAPDDLEAQRAAAIQLARAGRYDDSMVYMEKVLQGKGD 150 Query: 221 WNRNRAILLIA-----------RSLENADKGDMIASY------------HDAIESLKLCD 257 + + L A +S + + S +A +LKL + Sbjct: 151 THFDFLALSAADTDQDTRNGLMKSFDRLLQKHPKNSQLVFGKALLLQQDDEADAALKLLE 210 Query: 258 NSIM------ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTH-LLSENT 307 + + A+ L + N+ ++A +LEK + +P+ + Y L+ ++ Sbjct: 211 QNPPEEGEIAPILLRARLLQNLNRGKEAIPLLEK--NIKKYPDDKRLRLTYARMLVEQDR 268 Query: 308 VGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + K + L + + E ++ + LE + D+A ++ Sbjct: 269 MEDAKVQFANLVQQYPDDDELRYSLALVCLEAKAWDEAKGYLEELIQRE 317 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 97/288 (33%), Gaps = 11/288 (3%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + K+ Q ++ L Y L + L + ++ A LE ++Q + + A Sbjct: 267 DRMEDAKVQFANLVQQYPDDDELRYSL-ALVCLEAKAWDEAKGYLEELIQRESHVDSAHL 325 Query: 159 SLYFESCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + D +A YA + +A + A L + Sbjct: 326 NLGRIAEERNDPQAALLEYAQVGPGNDYLPAQLRQA--DILMSNGRTDEAEKRLAAARDA 383 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 ++ L + ++ + ++ ++L + + A +N Sbjct: 384 EPDYAIQ---LYLIQAETLSANKQGERAWKLLQQALLQFPDDLNLLYTRAMQAEKRNDLA 440 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE----EINKESVESLVIVSK 333 + E L I K +P +A + + A L ++N E L + Sbjct: 441 QMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRYAEAKVLIEQAHKLNPEDPAVLDSLGW 500 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + +G++D+A LA++ P +E+ L ++ AN + W Sbjct: 501 VNYRLGNLDEAERLLRLALERFPDQEVAAHLGEVLWANGKQREARQIW 548 >gi|115748300|ref|XP_001199177.1| PREDICTED: similar to heat shock protein 60 [Strongylocentrotus purpuratus] gi|115920030|ref|XP_001202135.1| PREDICTED: similar to heat shock protein 60 [Strongylocentrotus purpuratus] Length = 266 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 12/138 (8%) Query: 227 ILLIARSLENADKGDMIASYHDAIESLKL----CDNSIMASIC---AAKSLISQNKKRKA 279 + + + + +K D A D ++++ L + M + A S + + A Sbjct: 5 VTYLLITAAHFEKKDYSACREDCLKAVDLGRENRADFKMIAKAFSRVASSYAKEGDFKNA 64 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + +K + PE + KLK RL ++ E E + A + G Sbjct: 65 VLYYDKSLAEHRTPETLK-----KRQEVEKKLKELDRLAYVDPEKSEEEKALGNAAFQKG 119 Query: 340 SIDQAHAKAMLAMKIAPR 357 A A+K P Sbjct: 120 DYPTARKHYTEAIKRNPD 137 >gi|85705716|ref|ZP_01036813.1| TPR domain protein [Roseovarius sp. 217] gi|85669706|gb|EAQ24570.1| TPR domain protein [Roseovarius sp. 217] Length = 595 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 65/169 (38%), Gaps = 1/169 (0%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L+ ++ +Y++A E + + + + A R G ++A + I Sbjct: 320 LMAAELLEGLERYDLAIEAFKQVPRDHPSYHLAELGRSDVLRRAGKPDAAIEVLEQLATI 379 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 PD P V AV Y ++++ A+ ++ ++ + AR++ + + Sbjct: 380 YPDLPEVHVAVGDLYRSQEDFASAVPAYDRALDLYSARGSDQWFVHYARAISHERLDNWP 439 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291 + D +L+L + +++ ++ +A ++E+ P Sbjct: 440 EAEADFRRALELNPDHPQVLNYLGYTMVEKHINLDEALNMIERAVAAQP 488 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 88/287 (30%), Gaps = 31/287 (10%) Query: 81 YDKGYKALYTGLMS----IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 D+G L G+++ + ++ A V+++ + + + + + + Sbjct: 145 EDRGVGDLADGMIAAWADLGKGDMTSALARFDAVAEERGLRSFAIYH--KALALASVGDF 202 Query: 137 NIAHEKL--EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + E I TR V ++G+ A D + Sbjct: 203 EGADKVFSGEDDAPIQRTRR-GVIGWAQVLSQLGEQTRAISIIDDTFGSDLDHE---ISA 258 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++ + A + N+ + + R+L + I Y E +K Sbjct: 259 LRASLEAG------ESVPFNLVNSASDGISEVFFSLGRALMQEANDEYILIYARVAEMIK 312 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HP-----EIANIYTHLLSENT 307 + A + AA+ L + +R I + +K P HP E+ + Sbjct: 313 --PAHVDAILMAAELL--EGLERYDLAI--EAFKQVPRDHPSYHLAELGRSDVLRRAGKP 366 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ +L I + E V V + A A+ + Sbjct: 367 DAAIEVLEQLATIYPDLPEVHVAVGDLYRSQEDFASAVPAYDRALDL 413 >gi|148241045|ref|YP_001220546.1| TPR repeat-containing protein [Bradyrhizobium sp. BTAi1] gi|146411421|gb|ABQ39874.1| putative exported protein of unknown function with TPR repeats [Bradyrhizobium sp. BTAi1] Length = 421 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 8/192 (4%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + +A A + D V A Q + AI NQ K+ + + R +LL Sbjct: 13 AATLVFAMTAAASATDTSEVARAAFQAK-DRGQLLMAIGLFNQAMKDEQLSKKQRGLLLF 71 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 R G A+ D + L + A I++ + +A + L++ ++ Sbjct: 72 GRGTAYQQLGITEAALTDLDGVVALLPDFPGGYAYRAVIWIAERRYGEALMDLQQAHQLA 131 Query: 291 PHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P+ + N+Y + ++ + + + ++ + + +A Sbjct: 132 PNDASVLLNLGNLYA--QTGRLELAIENYGQAIGLRPDFDKAYFDRAGAYMVKHDFARAM 189 Query: 346 AKAMLAMKIAPR 357 A A+++ P Sbjct: 190 ADFDKAIELRPT 201 >gi|31213431|ref|XP_315659.1| AGAP005640-PA [Anopheles gambiae str. PEST] gi|21299587|gb|EAA11732.1| AGAP005640-PA [Anopheles gambiae str. PEST] Length = 931 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 19/164 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 569 RAAYFEKNH-GTRESLETLLQKAVAHCPQSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 626 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +L N D+ Sbjct: 627 ANPNSEDIWLAAVKLESENAEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDE--- 683 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +++K+ AK + + + + + +LE+ Sbjct: 684 --ALSLLEDAVKVFPEF-------AKLWMMKGQIEEQKQLLERA 718 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 74/225 (32%), Gaps = 22/225 (9%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + + + + Sbjct: 278 INDIKKARMLLKSVRETNPYHPPAWIASARLEEVTGKLQMARNLIMRGCEQNPQSEDLW- 336 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 337 -------LEAARLQPPDTAKGVIAQAARRIPTSVRIWIKAADLETEPKAKR---RVFRKA 386 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + + E+ L RA E SVE + ++++ + + A Sbjct: 387 LEHIPNSVRLWKAAVEMENPEDAKILLSRA---VECCGTSVELWLALARL----ETYENA 439 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHA 388 A + P I+ A++E+AN +N + AL + Sbjct: 440 RKVLNKAREKIPTDRQIWTTAAKLEEANGNNH-MVEKIIDRALSS 483 >gi|302406332|ref|XP_003001002.1| small glutamine-rich tetratricopeptide repeat-containing protein A [Verticillium albo-atrum VaMs.102] gi|261360260|gb|EEY22688.1| small glutamine-rich tetratricopeptide repeat-containing protein A [Verticillium albo-atrum VaMs.102] Length = 697 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 69/223 (30%), Gaps = 29/223 (13%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQ----- 197 Q P +LY + GD + A + KAL PD + + +++ Sbjct: 374 QDPEALVLRGRALYCQ----GDNDKAISHFRKALSCDPDMRDAVKWLRVVQKLERMKGEG 429 Query: 198 --YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 A +W AI + + +L R+L + A+ D +++L Sbjct: 430 NAEYKAGQWQAAIDKYTAALEIDPTNKGTNSKILQNRALCRTKLKEYDAAIADCERAVQL 489 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 A A +L S + A WK L E+ + Sbjct: 490 DPTYTKARKTKANALGSAERWEDAVK----EWKSIQ---------ELDPEDRTIAKEIRK 536 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E+ K + + +I+ + A LA+ P K Sbjct: 537 AELELKKSKRKDYYKILQISKDADDTQIKKAYRKLAIVHHPDK 579 >gi|258544627|ref|ZP_05704861.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258520135|gb|EEV88994.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 574 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 41/246 (16%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQR 175 + V L Q+ + Y A + +L + ++ + + R A Sbjct: 278 PQDATVRQLVAQLYASAGDYPAALQAFREILDAHRIDLNSYLFFVANAAERANQKEMAAT 337 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE--------------- 220 + SP E + K++ A +++ + Sbjct: 338 LLDEISKDSPRYLQAQERLALLAFARKDYDAAQERFAALRQDFPDDAQVLDTYLMEAAQL 397 Query: 221 -----WNRNRAILLIARSL-------------ENADKGDMIASYHDAIESLKLCDNSIMA 262 W R +L A + +A +GD+ + + L + +I A Sbjct: 398 QQAQQWKRLEKLLKAALARYPEQVDLLYVLAELHAARGDLKEAEEQFNKILAIDPANIDA 457 Query: 263 SICAAKSLISQN-KKRKAEVILEKIWKVNP-HPEI-----ANIYTHLLSENTVGKLKRAL 315 L++Q ++KA ++E K+ P P I +Y +E+ + L+RA Sbjct: 458 LNAYGYLLLTQGDDEKKAAQLIEAAIKLYPDSPAIQDSYGWLLYRQGKTEDALNWLRRAY 517 Query: 316 RLEEIN 321 N Sbjct: 518 AAYRSN 523 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 104/281 (37%), Gaps = 29/281 (10%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI- 149 GLM+ + A K S E + L++ Q+ + + A + ++ + Sbjct: 186 GLMAKEQGKVTTAVKAFSDAIALDGNWRE--LELMQAQVLASIGKLQEARKIMDRITTRY 243 Query: 150 -PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + Y + A A + ++ P V + V Q Y A ++ A+ Sbjct: 244 PQDINLLSAYIDMLIAHYQ--WQDAITLALRWKELRPQDATVRQLVAQLYASAGDYPAAL 301 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA----SI 264 ++ +A + N + +A + E A++ +M A+ D E K + A ++ Sbjct: 302 QAF-REILDAHRIDLNSYLFFVANAAERANQKEMAATLLD--EISKDSPRYLQAQERLAL 358 Query: 265 CA-AKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYT-HLLSENTVGKLKRALRLEE 319 A A+ ++R A L + + P+ A + Y + KR +L + Sbjct: 359 LAFARKDYDAAQERFAA--LRQDF-----PDDAQVLDTYLMEAAQLQQAQQWKRLEKLLK 411 Query: 320 IN----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E V+ L +++++ G + +A + + I P Sbjct: 412 AALARYPEQVDLLYVLAELHAARGDLKEAEEQFNKILAIDP 452 >gi|254428505|ref|ZP_05042212.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] gi|196194674|gb|EDX89633.1| tetratricopeptide repeat domain protein [Alcanivorax sp. DG881] Length = 389 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 50/223 (22%) Query: 82 DKGYKAL-------YTGL---MSIAA-----HNIPLARKMHSYVSQQHTFHNEYL--VYL 124 DKG +AL GL +++ A ++H+++ + + + L Sbjct: 54 DKGIEALLNSLDVSEEGLETHLALGKLFRKRGEFDRAAQLHTHLLEHGDYGRPVQEEIQL 113 Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 Q LA +++A + L ML ++ Sbjct: 114 ELAQDYLASGIFDLAEQVLLEMLDQD-----------CQAKD------------------ 144 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 V E ++ Y ++W AI+ + KN A ++ GD Sbjct: 145 ----EVCEQLMGLYEQERDWVNAISMGERLLKNRANLAPVLAQFCCEQAETLRRDGDTNP 200 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + +L + + AS+ + ++ A +++W Sbjct: 201 ARRMLRRALSFDNQCVRASLAEGDLEMEESNWGAAIDAFQRVW 243 >gi|171912095|ref|ZP_02927565.1| peptidase C14 caspase catalytic subunit p20 [Verrucomicrobium spinosum DSM 4136] Length = 659 Score = 43.0 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 81/253 (32%), Gaps = 17/253 (6%) Query: 115 TFHNEYLV-YLLEVQIALAERQYNIAHEKLEMMLQIP---ATREFAVYSLYFESCRIGDL 170 E L L + Q A R ++ A + E+ L+ T+ + +L Sbjct: 24 AAEQEDLAKRLAQAQSAQRSRNFDEAIDAYELALKSDLGSTTKTVVLINLGAAYNGKRQW 83 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A A + P+ P + ++ Q K A Sbjct: 84 DKAVPCFEAAQMLQPEQPASWYFMGDSLFALNRLEESLAAYTQAIKLLP----KEAAFYS 139 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 R+ G + D +++ + + A +Q+ AE + +++ Sbjct: 140 GRASLFLKMGKYELALEDCDAAVRFEPKTALHYDKRAAVYYAQSNIPAAERNYTEAIRLD 199 Query: 291 PHPEIAN-----IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P A +Y H + + L AL+L E + +++ MG +A Sbjct: 200 PANVSALNNRGVLYLHTQQWDKAIADLSLALKLA---PEHDSARCNRAQVFAGMGDWARA 256 Query: 345 HAKAMLAMKIAPR 357 + A+K+ PR Sbjct: 257 KSDYQEAVKLFPR 269 >gi|332305153|ref|YP_004433004.1| sulfotransferase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172482|gb|AEE21736.1| sulfotransferase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 662 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 48/221 (21%) Query: 160 LYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKN 217 L + R+ GD A + L+ SP+ + Y ++ A F + N Sbjct: 55 LLVVAQRLNGDFQQALASNARLLESSPEHARAWQENGYIYSALQEQQKSAQAFYQATQLN 114 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + RA+ + N + + D + +L I AK L+ + Sbjct: 115 PALLSSWRALQPLYIQQGNVKAATIAQAQIDYLAAL-------PKPILGAKDLMCEGDLH 167 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 A+ + + + NK E+++++++I ++ Sbjct: 168 SADKV-------------------------------CRQFLQANKHHPEAMLLLAEIGIQ 196 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLL--------LAQIEQA 370 + +A + + P L +A+ E A Sbjct: 197 LKVYGEADFILSSCLALYPDHSGAGLTYLQLLAKMAKFEDA 237 >gi|324510929|gb|ADY44563.1| Adenosine monophosphate-protein transferase FICD [Ascaris suum] Length = 475 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Query: 271 ISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE----EINKESV 325 + RKAE I++ + P HP+I Y L+ E L A L N Sbjct: 131 RKKGNMRKAETIIQHALALAPNHPDILTEYGILV-ETVRKNLVEAEELYTRALSYNPHHT 189 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 E+LV ++ + ID K + A++ RK + L +I + + + Sbjct: 190 EALVRRARTLPLVEEID---KKMLKALR---RKRAYFL--RIPRNSPALKRAMRE 236 >gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana] Length = 484 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 15/175 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD----ISPDA 187 + A + L+ M+++ E Y L E C+ G + A + K ++ + P + Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363 Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P ++++ + S+A T + Q K L ++ +G Sbjct: 364 TLHLEPSAYNSMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 419 Query: 243 IASYHDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +++ L+ +S ++ +S + +N+ A+ L+ + + + P+ A Sbjct: 420 DSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 474 >gi|302809168|ref|XP_002986277.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii] gi|300145813|gb|EFJ12486.1| hypothetical protein SELMODRAFT_123922 [Selaginella moellendorffii] Length = 668 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 42/305 (13%), Positives = 88/305 (28%), Gaps = 26/305 (8%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 R F A+L K + A + ++ A K + F+ LV Sbjct: 332 RDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLANAEKHAELAVLNNRFNACALV 391 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A + + + A+Y+L ++ A K Sbjct: 392 N--QGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVFKKISY 449 Query: 183 ISPDAPWV------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + P+ V V+ A +W + L K + A LL Sbjct: 450 VLPNNTEVLFQIGQVSDVMGNSRQAIKW---LELLVSKVMH-------DAGLLAMLGNLY 499 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294 D + H ES ++C ++ + + KA + ++ HP+ Sbjct: 500 VRCEDDAKALHYFSESHRVCPTDVVVTAWLGSFYLQNELYEKAMPFFQLASRI--HPDEV 557 Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + + + L + ++ + ++ E L + + +G + A Sbjct: 558 VKWKLKVALCLRRTGSFSKALHKYKQILNAHPDNAECLHCLVHLCTSLGRKMEVQAYESK 617 Query: 351 AMKIA 355 K+ Sbjct: 618 LWKVD 622 >gi|255035013|ref|YP_003085634.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254947769|gb|ACT92469.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM 18053] Length = 399 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 83/254 (32%), Gaps = 32/254 (12%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + F E Q A A N E Q + F + + +G++ Sbjct: 70 RARIYFERE--------QYAEALDDIN--ESIYE---QDNVSEYFLLRG--KINRELGNI 114 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 ++A A +A + +P + + + A +LNQ + A Sbjct: 115 DNALEDAQRAEALQQSSPELYVLLADILQAKNRFGEAAGYLNQALRMAP----YDGSAYY 170 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + + A +GD +AS ++ + + A + +A I EK +N Sbjct: 171 VKGMLQAKQGDSLASLSSLNYAMNVNPRLLRAYEQGTIINLKLKNTAEALAINEKA--LN 228 Query: 291 PHPEIANIY--------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 PE A+++ + L + I + E+L ++ +A++ + Sbjct: 229 RFPERASLFYGRGEILNALAQPDTA---LIFYQKALAIQPDYDEALNALATVAMQQRAYP 285 Query: 343 QAHAKAMLAMKIAP 356 A ++ P Sbjct: 286 AAIPALKKLLRKKP 299 >gi|218260152|ref|ZP_03475571.1| hypothetical protein PRABACTJOHN_01232 [Parabacteroides johnsonii DSM 18315] gi|218224711|gb|EEC97361.1| hypothetical protein PRABACTJOHN_01232 [Parabacteroides johnsonii DSM 18315] Length = 480 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 26/231 (11%) Query: 127 VQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYA---TK 179 ++ Y A E + L + Y LY + A Sbjct: 203 GRLYSISGDYEKAIEAFDFALTCDDSDEELKILKAYCLYMNENYEKAIEVYNDIATTDET 262 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 + I+P + YV + + +A L ++ K + + I + Sbjct: 263 RIRITPLLA-------ECYVKLENYEKAYVLLKEQLKQNNQLE--DSSTYINYIRCCVET 313 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV------NPHP 293 G + +++ KL +I A + + + KA E+++ Sbjct: 314 GRDEEASDVLMQASKLFPKNIRILSLLALTYLENGDEHKAMEATERLFTALDQVEDKQQE 373 Query: 294 EIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + ++Y + + L+ ++ E N E + ++ L G Sbjct: 374 DFESLYRAGQYLFMKGDIDKALQYYKKVLEANPEMPYMHLHMAMAYLAKGD 424 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 22/219 (10%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + + A + + E + +L+ Y A E + TR Sbjct: 209 SGDYEKAIEAFDFALTCDDSDEE--LKILKAYCLYMNENYEKAIEVYNDIATTDETR--- 263 Query: 157 VY--SLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV--LAKEWSRAITFL 211 + L E ++ + A + L + + + A L Sbjct: 264 IRITPLLAECYVKLENYEKAYVLLKEQLKQNNQLEDSSTYINYIRCCVETGRDEEASDVL 323 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL-----KLCDNSIMASICA 266 Q K + R ++L + LEN D+ + + +L K ++ + A Sbjct: 324 MQASKLFPKNIRILSLLALTY-LENGDEHKAMEATERLFTALDQVEDKQQEDF-ESLYRA 381 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300 + L + KA +K+ + NP H +A Y Sbjct: 382 GQYLFMKGDIDKALQYYKKVLEANPEMPYMHLHMAMAYL 420 >gi|193222309|emb|CAL61593.2| Putative response regulator receiver protein [Herminiimonas arsenicoxydans] Length = 542 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 63/159 (39%), Gaps = 9/159 (5%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + K+ + AI ++ K +W + +L ++ + G + +++L L Sbjct: 144 RLQKKDLAGAIAECDRVLKIEPKWIVD---ILKTKAGAALELGQNDEARRSYLQALGLRQ 200 Query: 258 NSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + + A + A+ ++ + +A + +LEK + ++ E+ L+ Sbjct: 201 DLVWAKLGLARCDQAEGRLEEAKIIVQGVLEKNAQYVDAYDLLAQIAESRGED-QQVLEA 259 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + + S + V A +G ++QA + A+ Sbjct: 260 LNKSYNVIPSARRSRM-VGDAAYRVGDLEQARSAYDKAL 297 >gi|170767100|ref|ZP_02901553.1| cellulose synthase operon protein C [Escherichia albertii TW07627] gi|170124538|gb|EDS93469.1| cellulose synthase operon protein C [Escherichia albertii TW07627] Length = 1157 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 70/195 (35%), Gaps = 5/195 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 357 QGDAALKANNPDQAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 416 Query: 186 DAPWVTEAVVQQYVLAK-EWSRA-ITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 + Y E + A I L+ ++ + + + L ++ ++G Sbjct: 417 SNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLSQQAEALENQGK 476 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT 300 + + L L S+ + ++ L ++ +A+ ++ + + P+ P+ Y Sbjct: 477 WAQAAALQRQRLALDPGSVWVTYRLSQDLWQAGQRTQADTLMRNLAQQKPNDPDQVYAYG 536 Query: 301 HLLSENTVGKLKRAL 315 LS + + A Sbjct: 537 LYLSGHDQERAALAH 551 Score = 39.9 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 40/351 (11%), Positives = 104/351 (29%), Gaps = 65/351 (18%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ A+N A ++ + ++ L +A+A + Y A + Sbjct: 352 WLAIQQGDAALKANNPDQAERLFQQARNVDNTDSYAVLGL--GDVAMARKDYPAAERYYQ 409 Query: 145 MMLQIPATREFAVYSLYF--------------------ESCRIGDLNSAQR---YATKAL 181 L++ ++ AV L + I D+ + + + +A Sbjct: 410 QTLRMDSSNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLSQQAE 469 Query: 182 DISPDAPWVTEAVVQQYVLAKE--------------WSRAI----TFLNQKKKNAKEWNR 223 + W A +Q+ LA + W L + K + Sbjct: 470 ALENQGKWAQAAALQRQRLALDPGSVWVTYRLSQDLWQAGQRTQADTLMRNLAQQKPNDP 529 Query: 224 NRAILLIARSLENADKGDMIASYHDAIES----------LKLCDNSIMASICAAKSLISQ 273 ++ + + +A ++ + +L + + + A L Sbjct: 530 DQVYAYGLYLSGHDQERAALAHINNLPRAQWNGNIQELVNRLQSDQV---LETANRLRDS 586 Query: 274 NKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 K++ AE +L + P P ++ + + + ++++ Sbjct: 587 GKEQDAEAML----RQQP-PSTRIDLTLADWAQQRRDDAAARAAYQNVLAREPNNADAIL 641 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 ++++ + G A ++ + QA +T Sbjct: 642 GLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALVQAQLGDTAAAQR 692 >gi|163783224|ref|ZP_02178218.1| hypothetical protein HG1285_14409 [Hydrogenivirga sp. 128-5-R1-1] gi|159881558|gb|EDP75068.1| hypothetical protein HG1285_14409 [Hydrogenivirga sp. 128-5-R1-1] Length = 207 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 17/112 (15%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDI 183 Q AL E Y A L++ T + L S ++ D ++Y + +++ Sbjct: 77 AQTALLEGDYETAEWLYNEALKMDGTPYEAHLILNDLVLLSQKLKDFERMKKYCEEDIEL 136 Query: 184 SPDAPW--------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 P E V + A+ + + + + Sbjct: 137 YPQYREELKKRSGGQLPQINAFEVYVYLLEREGKVKEALELVERIRSEGITY 188 >gi|90409035|ref|ZP_01217163.1| hypothetical protein PCNPT3_12073 [Psychromonas sp. CNPT3] gi|90309868|gb|EAS38025.1| hypothetical protein PCNPT3_12073 [Psychromonas sp. CNPT3] Length = 317 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 40/192 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNE--YLVYL-LEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + A ++H + + + E L L L ++ + E + + P +E Sbjct: 10 GEVDRAIRIHQNLIARPSLTREQRDLALLQLGNDFYQ-SGLFDRSEEIFLQLKESPEYQE 68 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ- 213 A+ E ++ Y KEW AI+ + Sbjct: 69 VAL----------------------------------EKLLNIYQQLKEWQEAISVTERL 94 Query: 214 -KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K + K NR + L + + E + D+ ++L I A + + + Sbjct: 95 NKLVSGKNNNRTLSYLYCSLADELTELSDIKKKLGLYKKALATYPACIHAILALSDYYLD 154 Query: 273 QNKKRKAEVILE 284 Q K K+ LE Sbjct: 155 QQKHHKSLQTLE 166 >gi|300694327|ref|YP_003750300.1| tpr repeat domain [Ralstonia solanacearum PSI07] gi|299076364|emb|CBJ35677.1| conserved hypothethical protein, tpr repeat domain [Ralstonia solanacearum PSI07] Length = 700 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 60/230 (26%), Gaps = 45/230 (19%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 ++ + A +A +A+ ++P + A+ + A+ Q + Sbjct: 262 RQVERPDEALAFARQAVALAPRSAEAHHALAMALQALGQTDEALPHFEQAARLPGAVAEE 321 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVIL 283 L+ R+ + G A+ ++L+ S+ A A + + Sbjct: 322 ---ALVGRATLLMEAGRRDAALAAFDQALERFPGSVQALAGLADARTFTAGDS------- 371 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +IA + L R + K L++ + Sbjct: 372 ----------DIAALEACLAEGERRSLRDRISA-----------HFALGKAYLDLQDPAR 410 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA-MPDP 392 A + + + W + A P+P Sbjct: 411 AFHHLDAGNRQKRSTFTY------------DGAASSRWMERIAEAFPPEP 448 >gi|198470165|ref|XP_002133383.1| GA22864 [Drosophila pseudoobscura pseudoobscura] gi|198145323|gb|EDY72011.1| GA22864 [Drosophila pseudoobscura pseudoobscura] Length = 604 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 5/130 (3%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + F S + A A ++P V + + YV K + A T + Sbjct: 346 LRGNLFISLQR--YREAIEAFRNAQGLAPYRFEVYKGLFHCYVAQKRFKEAQTMCVWAIR 403 Query: 217 NAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + R+ + R+L + + ++ ++LK+ + A A+ + Sbjct: 404 S--FRTSPRSYTMFGRTLFHSTNPAAKRSARKFVEKALKIDSSYTPAVALMAEICQYEGA 461 Query: 276 KRKAEVILEK 285 + A +LEK Sbjct: 462 TKAAIKLLEK 471 >gi|75076017|sp|Q4R5F5|IFIT1_MACFA RecName: Full=Interferon-induced protein with tetratricopeptide repeats 1; Short=IFIT-1 gi|67970655|dbj|BAE01670.1| unnamed protein product [Macaca fascicularis] Length = 478 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 17/143 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 223 LALKLQDNGQEAEGEKYLEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIAS-YHDAIESLKLC-----------DNSIMA 262 + + A+ ++ + KG + ++L +A Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKIDKMIRLAIFHFESAVENKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAEVILEK 285 + A+ I RKAE +K Sbjct: 343 HLDLARMYIEAGNHRKAEETFQK 365 >gi|83311709|ref|YP_421973.1| O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] gi|82946550|dbj|BAE51414.1| Predicted O-linked N-acetylglucosamine transferase [Magnetospirillum magneticum AMB-1] Length = 639 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 66/229 (28%), Gaps = 14/229 (6%) Query: 137 NIAHEKLEM-MLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + Q P + E A + +L + G A +AL ++P Sbjct: 2 DEAEALYHRVLRQAPQSPEAAKSLTNLGVIAHGRGRTGEALTLHGQALALAPQLAEAWCN 61 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A + + +GD + + Sbjct: 62 RGDLLSDLGR----LEEAEGDFVRACDLSPALLPAWFNLGNVRLRRGDTAQAEPCYRRAA 117 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLK 312 L + + A+ L + + A +E W++ P+ + T L + + G+L Sbjct: 118 ALAPHLPLIHAQLARCLDAMGQAEGAADAMEAAWRLA--PDDWRLLTDLGALQQQAGRLH 175 Query: 313 RA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 A +N + + + G +A A A + P Sbjct: 176 AAQNSLRAAISLNPSHAAAHYNLGNVFYGEGRAAEAVACWQAAWSMDPS 224 >gi|120554730|ref|YP_959081.1| TPR repeat-containing protein [Marinobacter aquaeolei VT8] gi|120324579|gb|ABM18894.1| Tetratricopeptide TPR_2 repeat protein [Marinobacter aquaeolei VT8] Length = 189 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 42/128 (32%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 E A+ + + A E + + + + +L + R GD + A+ + +A ++P Sbjct: 44 EAVKAMKQGNFTEARTVFEQLARNYPDKAGPMANLGIIAFREGDADGAKEWFERARAVNP 103 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + A E+ A + ++ L + + D I Sbjct: 104 EHVQALNHLGVIARNAGEFDEAERYYRAALAADPDYAPAILNLAFLLDIYLGNPADAIEL 163 Query: 246 YHDAIESL 253 Y + Sbjct: 164 YERYQSAA 171 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 7/139 (5%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 + ++ N AR + +++ + + L IA E + A E E Sbjct: 43 SEAVKAMKQGNFTEARTVFEQLARNYPDKAGPMANL--GIIAFREGDADGAKEWFERARA 100 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWS 205 + A+ L + G+ + A+RY AL PD ++ Y+ + Sbjct: 101 VNPEHVQALNHLGVIARNAGEFDEAERYYRAALAADPDYAPAILNLAFLLDIYL--GNPA 158 Query: 206 RAITFLNQKKKNAKEWNRN 224 AI + + A E + Sbjct: 159 DAIELYERYQSAASEPHPR 177 >gi|330837945|ref|YP_004412525.1| Tetratricopeptide TPR_2 repeat-containing protein [Selenomonas sputigena ATCC 35185] gi|329745709|gb|AEB99065.1| Tetratricopeptide TPR_2 repeat-containing protein [Selenomonas sputigena ATCC 35185] Length = 448 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%) Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + A + R++ A +G+ + D +L+L S A A + Sbjct: 287 AEKKLAEKKNAAAYVYRAIVFAKRGESERAAADLEAALRLSPKSAAALYDRALFFTAAGD 346 Query: 276 KRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330 +++A+ LE + K P+ + +L + ++ R+ + +S + Sbjct: 347 EKRAKADLEALIKAQ--PDFVYAWYNLGVMNLKAGRNNAAMRDFERVLALVPQSANAQSN 404 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + +A A +I Sbjct: 405 IGIALVREKKYREAWRAFAQAAEINTT 431 >gi|262304981|gb|ACY45083.1| acetylglucosaminyl-transferase [Eurytemora affinis] Length = 289 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 8/166 (4%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES 164 ++ Q H + L L I + A + + P A +L Sbjct: 42 CYNTALQLSPTHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAAHSNLASIL 98 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G LN A + +A+ I P + + A+ ++ + + Sbjct: 99 QQQGKLNEALLHYKEAIRIQPAFADAYSNMGNTLKEMHDVQGALQCYSRAIQINPAF--- 155 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + D G++ + +LKL + A A L Sbjct: 156 -ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPDFPDAYCNLAHCL 200 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVVESEECYNTALQLSPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASILQQQGKLNEALLHYKEAIRIQ--PAFAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ + + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMHDVQGALQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 K+ P Sbjct: 184 KLKPD 188 >gi|254675259|ref|NP_958795.2| plectin isoform 1g [Mus musculus] Length = 4550 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1404 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1463 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1464 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1523 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1524 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1564 >gi|224026080|ref|ZP_03644446.1| hypothetical protein BACCOPRO_02833 [Bacteroides coprophilus DSM 18228] gi|224019316|gb|EEF77314.1| hypothetical protein BACCOPRO_02833 [Bacteroides coprophilus DSM 18228] Length = 310 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 15/211 (7%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + IG L A + +A I + +V Y A A L + + Sbjct: 36 ARNIGQLAYAIKCFEEATAIQ-EETETLSLLVTSYTQANRLDDARHTLERMIA----LDG 90 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +A I+ + + D ++++L +A AAK+ I + A +L Sbjct: 91 QQADTWISLAGVCYMQEDYKTMEEACRKAIELDSQKPLAYYFAAKAAIGLHNDFMAIAML 150 Query: 284 EKIWKVNPHPEIANIYTHLLSEN--TVGKLKRA----LRLEEINKESVESLVIVSKIALE 337 K + + Y L +E + ++K A L +N ++L++ ++I Sbjct: 151 TKAILLKE--DYTEAY-QLRAETLWNMRQVKEAGEDIQVLLRMNPNDEQALLLDAEIQAA 207 Query: 338 MGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI 367 G+ DQA + + + P +++ + LL ++ Sbjct: 208 TGNTDQAIGQLQQILSLNPFQEKAYFLLGEL 238 >gi|197117287|ref|YP_002137714.1| cobalamin-binding radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197086647|gb|ACH37918.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding oxidoreductase with TPR domain [Geobacter bemidjiensis Bem] Length = 564 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 32/81 (39%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 SY +Q+ ++ +L + + ++ A M++ + + L R Sbjct: 428 ASYAAQRALLGYCFVTEMLCAESLEQQGDWDGALRLYRGMVKAEPDNPWGLLQLGGLQAR 487 Query: 167 IGDLNSAQRYATKALDISPDA 187 +GD+ A R KAL + P Sbjct: 488 MGDMKGASRSYQKALQLVPRH 508 >gi|330873309|gb|EGH07458.1| TPR domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 556 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F + LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGISERA----YQIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--------- 222 SA A +P A Q A + ++ ++ + + + + Sbjct: 84 SALETALIWARNAPRDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143 Query: 223 ---------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 L+ ++L GD S +E D I Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKDGEIA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + ++A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 296 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 K+ Q ++ L + L + L + + A LE ++ A + A +L Sbjct: 254 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 312 Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 D SA YA + PD V + A L++ + ++ Sbjct: 313 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 370 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + + + ++LK + A +N + E Sbjct: 371 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 427 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338 L I K P +A + + A L E + L + + + Sbjct: 428 LRSIIKREPENAMALNALGYTLSDRTTRYAEARELIEKAHQISPDDPAVLDSLGWVNYRL 487 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G++D A A++ P E+ L ++ A + + AL PD Sbjct: 488 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 539 >gi|168698258|ref|ZP_02730535.1| peptidase-like protein [Gemmata obscuriglobus UQM 2246] Length = 1380 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 85/291 (29%), Gaps = 50/291 (17%) Query: 98 HNIPLARKMHSYV----SQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEM------ 145 N A+ M+ + + L L L A E Sbjct: 159 GNTNDAKAMNERALAIRRKLLPVQHPDLGRSLNNLALLQANLGDRKEAAEGYRKAVCIWK 218 Query: 146 --MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQ- 197 + F + +L + DL A+R +AL I P + + Sbjct: 219 AGLGADDPLVAFGLTNLGLVQHDLRDLEGARRSHQEALAIRRKALPKDHPDIASTLNNLG 278 Query: 198 --YVLAKEWSRAI----TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ A L+ ++K + A+ L L D D+ + E Sbjct: 279 LVQRDLRDLEGARKSHQEALDIRRKMRPTGHSGVAMSLNNLGLVQRDLRDLEGARKSHQE 338 Query: 252 SLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKVN-----------P--HPEIAN 297 +L +C ++ A A SL + + LE K + P HP+IA+ Sbjct: 339 ALDICRKALPAGHPGVAMSLNNLGNAQYDLRDLEGARKSHEEALAIRRKALPKDHPDIAS 398 Query: 298 IY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + + LE K E + + + AL G A + Sbjct: 399 TLNNLGVAQHD-------LRDLEGARKSHQE-ALDICRKALPAGHPGVAMS 441 >gi|75906644|ref|YP_320940.1| hypothetical protein Ava_0419 [Anabaena variabilis ATCC 29413] gi|75700369|gb|ABA20045.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 224 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 5/171 (2%) Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 +N L LLE + + YN A + + + + + G+ +A Sbjct: 35 NNAELKRLLEDGKRLVDAGDYNGAIAVYQQAATMEPRNARIHSGIGYLHAQQGNFQAALA 94 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A+ I+P+ AV + A + A + NRN + + Sbjct: 95 SYRRAIAINPNNSDFFYAVGYIKGNMGDTPGAKE----AYRRAIQLNRNNVSAYVGLGIT 150 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + GD ++ +++KL N+ A + + ++A +L+K Sbjct: 151 QSRMGDFQSANWAFEQAIKLDKNNAQTYEFMAAMYKQRRQTKQASNLLQKA 201 >gi|22125250|ref|NP_668673.1| fimbrial biogenesis protein [Yersinia pestis KIM 10] gi|45442519|ref|NP_994058.1| putative fimbrial biogenesis protein [Yersinia pestis biovar Microtus str. 91001] gi|108808315|ref|YP_652231.1| putative fimbrial biogenesis protein [Yersinia pestis Antiqua] gi|108811420|ref|YP_647187.1| fimbrial biogenesis protein [Yersinia pestis Nepal516] gi|145599498|ref|YP_001163574.1| fimbrial biogenesis protein [Yersinia pestis Pestoides F] gi|149365341|ref|ZP_01887376.1| putative fimbrial biogenesis protein [Yersinia pestis CA88-4125] gi|162418968|ref|YP_001605026.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis Angola] gi|165925883|ref|ZP_02221715.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Orientalis str. F1991016] gi|165937091|ref|ZP_02225656.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Orientalis str. IP275] gi|166008363|ref|ZP_02229261.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Antiqua str. E1979001] gi|166212386|ref|ZP_02238421.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Antiqua str. B42003004] gi|167398612|ref|ZP_02304136.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421166|ref|ZP_02312919.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423678|ref|ZP_02315431.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470722|ref|ZP_02335426.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis FV-1] gi|170023537|ref|YP_001720042.1| type IV pilus biogenesis/stability protein PilW [Yersinia pseudotuberculosis YPIII] gi|218929941|ref|YP_002347816.1| putative fimbrial biogenesis protein [Yersinia pestis CO92] gi|229838461|ref|ZP_04458620.1| putative fimbrial biogenesis protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895162|ref|ZP_04510338.1| putative fimbrial biogenesis protein [Yersinia pestis Pestoides A] gi|229899028|ref|ZP_04514172.1| putative fimbrial biogenesis protein [Yersinia pestis biovar Orientalis str. India 195] gi|229901677|ref|ZP_04516799.1| putative fimbrial biogenesis protein [Yersinia pestis Nepal516] gi|270489872|ref|ZP_06206946.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis KIM D27] gi|294504557|ref|YP_003568619.1| putative fimbrial biogenesis protein [Yersinia pestis Z176003] gi|21958121|gb|AAM84924.1|AE013738_1 putative fimbrial biogenesis protein [Yersinia pestis KIM 10] gi|45437384|gb|AAS62935.1| putative fimbrial biogenesis protein [Yersinia pestis biovar Microtus str. 91001] gi|108775068|gb|ABG17587.1| fimbrial biogenesis protein [Yersinia pestis Nepal516] gi|108780228|gb|ABG14286.1| putative fimbrial biogenesis protein [Yersinia pestis Antiqua] gi|115348552|emb|CAL21492.1| putative fimbrial biogenesis protein [Yersinia pestis CO92] gi|145211194|gb|ABP40601.1| fimbrial biogenesis protein [Yersinia pestis Pestoides F] gi|149291754|gb|EDM41828.1| putative fimbrial biogenesis protein [Yersinia pestis CA88-4125] gi|162351783|gb|ABX85731.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis Angola] gi|165914954|gb|EDR33566.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Orientalis str. IP275] gi|165922087|gb|EDR39264.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Orientalis str. F1991016] gi|165992745|gb|EDR45046.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Antiqua str. E1979001] gi|166206317|gb|EDR50797.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Antiqua str. B42003004] gi|166960655|gb|EDR56676.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051116|gb|EDR62524.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057848|gb|EDR67594.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750071|gb|ACA67589.1| type IV pilus biogenesis/stability protein PilW [Yersinia pseudotuberculosis YPIII] gi|229681606|gb|EEO77700.1| putative fimbrial biogenesis protein [Yersinia pestis Nepal516] gi|229687973|gb|EEO80045.1| putative fimbrial biogenesis protein [Yersinia pestis biovar Orientalis str. India 195] gi|229694827|gb|EEO84874.1| putative fimbrial biogenesis protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701924|gb|EEO89947.1| putative fimbrial biogenesis protein [Yersinia pestis Pestoides A] gi|262366545|gb|ACY63102.1| putative fimbrial biogenesis protein [Yersinia pestis D182038] gi|270338376|gb|EFA49153.1| type IV pilus biogenesis/stability protein PilW [Yersinia pestis KIM D27] gi|294355016|gb|ADE65357.1| putative fimbrial biogenesis protein [Yersinia pestis Z176003] gi|320016018|gb|ADV99589.1| putative fimbrial biogenesis protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 249 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 2/162 (1%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L LA+ A + LE ++ + F + RIG+ ++A++ +A+ Sbjct: 35 TRLQLGLAYLAQGDLTAARKNLEKAVEADPQDYRTQLGMAFYAQRIGENSAAEQRYQQAM 94 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++P V ++ A + ++ Sbjct: 95 KLAPGNGTVLNNYGAFLCSLGQYVSAQQQFSAAALLPDYGQVADSLENAGYC--FLRANQ 152 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + +LK + + A+ + + +A+++L Sbjct: 153 DKQARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194 >gi|330975574|gb|EGH75640.1| TPR repeat-containing protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 556 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F + LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217 SA A +P A Q A + ++ ++ + + Sbjct: 84 SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143 Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + + +L + ++L GD S +E + I Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + D+A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 74/205 (36%), Gaps = 7/205 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L + ++ N A K S + +YL+E + + Q + + L L Sbjct: 340 LRQADILVSNGNGAEAAKRLSEARAEE-PDYAVQLYLIEAETLTSNDQLDRGWQVLNQAL 398 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206 + +Y+ + + DL ++ + P+ A+ ++ Sbjct: 399 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYTE 458 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + + K + + +L + N G++ + ++L+ + +A+ Sbjct: 459 ARELIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 513 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 + L ++ ++R+A+ + K + P Sbjct: 514 GEVLWAKGEQREAKKVWAKALEQQP 538 >gi|168000971|ref|XP_001753189.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695888|gb|EDQ82230.1| predicted protein [Physcomitrella patens subsp. patens] Length = 383 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 72/283 (25%), Gaps = 44/283 (15%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 D G + L++ A N+ + S + L L +A Sbjct: 114 RVSRRDLGLFGISLPLLAGFASNLE--AEAASRSVRLKDVEYPKLQEALRAAVA---GDL 168 Query: 137 NIAHEKLEMML-QIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A ++ + P + + S + A TKA+ ++PDAP Sbjct: 169 EKAETMFSELIEEDPKSASVWSNRGSVRVSLQK--YEQAAEDFTKAIALAPDAPVPFLNR 226 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 Y + AI N E D A+ + + + Sbjct: 227 AISYEAMGRFDDAIADCKTAIINDPE----EYAAWFNLGNVEVRVRDYDAALNAYSRASR 282 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 L + A L N+ + + Sbjct: 283 LAPGIAGYRLKEALVLFELNRLEECRKL-------------------------------V 311 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L E+ +++ + + G+ D A + A PR Sbjct: 312 QGLVRKYPNYAEAHAVLAAVLWKEGNRDLAEGQFSEATVREPR 354 >gi|90075104|dbj|BAE87232.1| unnamed protein product [Macaca fascicularis] Length = 478 Score = 42.6 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 17/143 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 223 LALKLQDNGQEAEGEKYLEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIAS-YHDAIESLKLC-----------DNSIMA 262 + + A+ ++ + KG + ++L +A Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKIDKMIRLAIFHFESAVENKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAEVILEK 285 + A+ I RKAE +K Sbjct: 343 HLDLARMYIEAGNHRKAEETFQK 365 >gi|317123705|ref|YP_004097817.1| serine/threonine protein kinase [Intrasporangium calvum DSM 43043] gi|315587793|gb|ADU47090.1| serine/threonine protein kinase [Intrasporangium calvum DSM 43043] Length = 827 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 45/172 (26%), Gaps = 15/172 (8%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL ++ + P A+ + V Q E L + +A + Sbjct: 620 QGLAALERGDAPSAQAAFNAVYGQ--VPGELAPKLALAHASEKAGDDAVAENLYVACART 677 Query: 150 PATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 +T A + L GD++ A A + P + + Sbjct: 678 DSTYVPMAAFGLARIRAARGDVDGAVA----AYRLVPTQSSA------YRTARAGLAELL 727 Query: 209 TFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 N+ + E R A L AR + E+ + Sbjct: 728 ARANRGLPDLAEALRTLADTSLTARRRAEVTTHIYREALASVREA-GAQPDL 778 >gi|290982719|ref|XP_002674077.1| TPR domain-containing protein [Naegleria gruberi] gi|284087665|gb|EFC41333.1| TPR domain-containing protein [Naegleria gruberi] Length = 724 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 82/231 (35%), Gaps = 16/231 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + + E +L++ + A+ L +GD+ +++R KAL ++ + V Sbjct: 117 DGNTEESKKLYESVLELNSKNVSALSGLAACYLLLGDIPASKRLIEKALKVNSEYYHVYH 176 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 Y ++ AI NQ + R+ ++L + + + E Sbjct: 177 VRGMIYDEEGDYENAIKMYNQSSFLNPMYARS----HYNKALSYEKLFLIEQAIDEYREC 232 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEV----ILEKIWKVNPHPEIANIYTHLLSENTV 308 ++L I + + + +K +A IL K N +I++ + + + Sbjct: 233 IRLDSTHISSHQNLSYCYLQMGEKDRAIKILHEILSKNIDANSMADISDSFREIGDDE-- 290 Query: 309 GKLKRALRLE---EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 K L ++ + E + + + M A + A ++ P Sbjct: 291 ---KACQVLTSAISLDPTNAEIYIRRADLYKHMEKKSLALMDYLKACELDP 338 >gi|170750467|ref|YP_001756727.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM 2831] gi|170656989|gb|ACB26044.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium radiotolerans JCM 2831] Length = 622 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 84/302 (27%), Gaps = 64/302 (21%) Query: 83 KGYKALYTGLMSIAAHNIPLARKM---------------HSYVSQQHTFHNEYLVYLLEV 127 + Y A GL++ + A + +Y + + L Sbjct: 183 RDYHA---GLIASVTGDNAEAERRLKAAYDADHNTLRIVDAYARMEASLGRTDLAIQAYS 239 Query: 128 QIALAERQYNIAHEKLEMMLQ-IPATREFA---------VYSLYFESCRIGDLNSAQRYA 177 ++ + + LE + + P TR +Y L GD A Y Sbjct: 240 DFDQLSPRHPLVRDALEKLKEGKPLTRLIGTAQEGAAEVLYGLGSAGSTQGDELPAVIYL 299 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 AL ++PD + K+ RA + A + A + I +LE Sbjct: 300 RLALYLAPDHALARLTLADTLDRMKQPERANEAY--AQIPANSPLKLNADIQIGLNLEQM 357 Query: 238 DKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 KGD + A+++ + I A ++A E+ A Sbjct: 358 GKGDEALAHLDAAMKAHPDDIDVITA----------LGNVQRARKKYEEA---------A 398 Query: 297 NIYTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 YT RA+ L + +A A A+ + Sbjct: 399 ATYT------------RAIDLIGDRPQSNYWTTYYFRGTAYERAKQWPKAEADLKKALSL 446 Query: 355 AP 356 P Sbjct: 447 VP 448 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 16/246 (6%) Query: 123 YLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L IA A R A E + P E + + G L A R A K + Sbjct: 48 NFLSAYIAGASRDTAAAATFYREAVKADPRNAELVERA-FISLLADGALPDAFRTAEKLI 106 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P ++ + + A +W+ A ++ + A A LL A S A G Sbjct: 107 ARDPTNGLANLSLGVRQIKAGQWAAARQNFSRSGRGA--ATDLTATLLTAWSYAGAGDGK 164 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + + + + A +AE L+ + + H + + + Sbjct: 165 KALETVNKLRGERYYNTFR--DYHAGLIASVTGDNAEAERRLKAAYDAD-HNTLRIVDAY 221 Query: 302 LLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 E ++G+ ++ ++++ + + ALE + + + + Sbjct: 222 ARMEASLGRTDLAIQAYSDFDQLSPRHP-----LVRDALEKLKEGKPLTRLIGTAQEGAA 276 Query: 358 KEIFLL 363 + ++ L Sbjct: 277 EVLYGL 282 >gi|158285098|ref|XP_308135.4| AGAP003902-PA [Anopheles gambiae str. PEST] gi|157020735|gb|EAA03879.4| AGAP003902-PA [Anopheles gambiae str. PEST] Length = 585 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P + +A+V Y+ A L K R ++L+AR+ + Sbjct: 370 APYRYEIHKALVDNYLNMGRNREAQ--LQALKAVKMLGESARMLVLLARTYMKDEAARP- 426 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +++L++ +N + A ++ + +N +L+K Sbjct: 427 KAKALCLKALEMSENFLPAVYLLSEIYLRENDISTRMKLLKK 468 >gi|66044200|ref|YP_234041.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae B728a] gi|63254907|gb|AAY36003.1| TPR repeat:TPR repeat [Pseudomonas syringae pv. syringae B728a] Length = 556 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F + LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGVSERA----YQIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK--------------N 217 SA A +P A Q A + ++ ++ + + Sbjct: 84 SALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143 Query: 218 AKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + + +L + ++L GD S +E + I Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + D+A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 Score = 36.8 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 74/205 (36%), Gaps = 7/205 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L + ++ N A K S + +YL+E + + Q + + L L Sbjct: 340 LRQADILLSNGNGAEAAKRLSEARAEE-PDYAIQLYLIEAETLTSNDQLDRGWQVLNQAL 398 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206 + +Y+ + + DL ++ + P+ A+ +S Sbjct: 399 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYSE 458 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + + K + + +L + N G++ + ++L+ + +A+ Sbjct: 459 ARDLIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 513 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 + L ++ ++R+A+ + K + P Sbjct: 514 GEVLWAKGEQREAKKVWAKALEQQP 538 >gi|300865616|ref|ZP_07110390.1| hypothetical protein OSCI_2080002 [Oscillatoria sp. PCC 6506] gi|300336371|emb|CBN55540.1| hypothetical protein OSCI_2080002 [Oscillatoria sp. PCC 6506] Length = 1330 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 63/207 (30%), Gaps = 46/207 (22%) Query: 158 YSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 Y E + G+ + A +A++++PD W + + W A Q K Sbjct: 738 YHYLGEILQELGEDDRAIAVYRRAIELNPDFCWSYNNLGDILMQLSRWEEAAAAYRQGIK 797 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 ++ L D + S+ L + S S + Sbjct: 798 INPDF----CWLYNKLGEALVKISDWEEAADAYRRSIDLNPDFC-------WSYYSLGE- 845 Query: 277 RKAEVILEKI--WKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIV 331 +LE+ W+ + Y L +E+T + K L ++ Sbjct: 846 -----VLEEQQYWEEA-----VSAYQRAVELEAEDTWMRKKLGDGLRQL----------- 884 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRK 358 G D+A A A++I P+ Sbjct: 885 -------GLWDEAMAIYEQAIEIDPKA 904 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 5/116 (4%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 + + + L LL + + A L+I A +SL Sbjct: 139 RQAIKLKPDAFGSHHSLGKLLAAK-----GNIDEAIACQYKSLEINPNYVRAYHSLGNVL 193 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + G+L+SA Y +KA++++P+ W ++ ++ + W +AI + + + Sbjct: 194 VQKGELDSAIAYYSKAIELNPNYCWSYNSLGDVFLKQERWDKAINSYQKAIEMKGD 249 >gi|256829653|ref|YP_003158381.1| hypothetical protein Dbac_1874 [Desulfomicrobium baculatum DSM 4028] gi|256578829|gb|ACU89965.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum DSM 4028] Length = 793 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 80/281 (28%), Gaps = 21/281 (7%) Query: 129 IALAERQYNIAHEKLE-MMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPD 186 R+Y A E + + R A+ Y+L + D A P Sbjct: 42 ALHQSREYEEALRAFEQAVFLKASARVQALPYALSLSALHRHDEAIALL--EPLQAKKPK 99 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + A + +A+ +K + + G+ A+ Sbjct: 100 DFDLINLLGVMLKRAGRFEQALGMFELARKLRP----RLVSAWVNTGNVHEAMGNFQAAA 155 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHL--- 302 E+ +L + SL Q + A L++ + P P + + Sbjct: 156 EAFGEAARLEPRNAELWRLQGASLFRQRRTEPALQALDRAASLAPADPASFRTHVQVLAK 215 Query: 303 --LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + ++R E +++++I G ID A + P Sbjct: 216 LGRHDEAAAAIERFR---AARPGDPEPAIMLARIRYNAGRIDDARKLLAEVLADEPGHLS 272 Query: 361 FLLLAQIEQANS---HNTDKILYWTQSALHAMPDPLWISDD 398 LL + + + AL A PD W + + Sbjct: 273 ANLLLAQTCGDGTAEGSRRMANDALRRALAANPD-AWQAAE 312 >gi|118471199|ref|YP_886221.1| hypothetica lprotein [Mycobacterium smegmatis str. MC2 155] gi|118172486|gb|ABK73382.1| tetratricopeptide repeat protein, putative [Mycobacterium smegmatis str. MC2 155] Length = 340 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 44/166 (26%), Gaps = 6/166 (3%) Query: 127 VQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q Y A E L + Q P E + + D A A A+ +P Sbjct: 12 AQAYFDSGNYMRAEEVLRSALAQDPDNPEL-LAGYAQARLGLNDYQGAAWAAHSAIAKAP 70 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A+ + + I A + G + Sbjct: 71 TNEHAKRIYAFALSGQGRNADALQVAWKSVTEHPDVY----IAHYAYANLLLSAGQAQQA 126 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 E+L+L + + + + N AE + ++ P Sbjct: 127 LTAINEALRLNPTAPDSWVLRGDIYRALNWMAPAEADYREALRLQP 172 >gi|40849910|gb|AAR95667.1| plectin 2 [Mus musculus] Length = 4534 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1388 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1447 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1448 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1507 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1508 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1548 >gi|40849922|gb|AAR95673.1| plectin 8 [Mus musculus] Length = 4543 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557 >gi|81428417|ref|YP_395417.1| hypothetical protein LSA0804 [Lactobacillus sakei subsp. sakei 23K] gi|78610059|emb|CAI55108.1| Hypothetical protein LCA_0804 [Lactobacillus sakei subsp. sakei 23K] Length = 219 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 5/155 (3%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A Q+ A ++L L+ T A +L + D A+ KAL P+ + Sbjct: 10 AAGQHEEAVQQLVDYLEKTPTDIEAYVTLATFLTTLKDYEQAEVLLQKALTQFPENDALQ 69 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A+ Y A+ + +A T +Q K + + + LE + A+ Sbjct: 70 YALGTLYYQAEAYQQAETTFSQLVKETQALDAQYMLAQTYHQLE-----QNARAMAFALT 124 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + A+I LIS +A+ + Sbjct: 125 VQEKQPDQLDANILVGNILISLGDFDQAQTYFKNA 159 >gi|119774582|ref|YP_927322.1| hypothetical protein Sama_1445 [Shewanella amazonensis SB2B] gi|119767082|gb|ABL99652.1| hypothetical protein Sama_1445 [Shewanella amazonensis SB2B] Length = 386 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 11/144 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEY--LVYLLEVQI-ALAERQYNIAHEKLEMML 147 ++ + + A+ ++ Y E L L + A ++A + + Sbjct: 244 AIVHRRSGDWHSAQALYQYA-----LEIEPDNLAVLDNYRALAKLAGNTDLADTLKKRIA 298 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 +I R F Y L E+ R G+ N A+ Y +K L +P + + + ++ A Sbjct: 299 RIEDYRGFDFYVLGHEALRQGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFDIA 358 Query: 208 ITFLNQKKK---NAKEWNRNRAIL 228 L + +++ R +A L Sbjct: 359 KQALEKALALSSRSEDARRYQAKL 382 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 55/170 (32%), Gaps = 15/170 (8%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ + + G + +Y A E +K + AA A+ + + Sbjct: 203 AMFYRNLASDALVAGRLEDAYWLAREGVKWAPKYVPLINVAAIVHRRSGDWHSAQALYQY 262 Query: 286 IWKVNP--------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 ++ P + +A ++ KR R+E+ ++ AL Sbjct: 263 ALEIEPDNLAVLDNYRALAK--LAGNTDLADTLKKRIARIEDYRGFDF---YVLGHEALR 317 Query: 338 MGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSAL 386 G+ ++A +K AP + LA+++ + AL Sbjct: 318 QGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFD-IAKQALEKAL 366 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 12/126 (9%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL----AKEWSRAITFLNQKKKNAKE 220 R GD +SAQ AL+I PD AV+ Y A A L ++ ++ Sbjct: 248 RRSGDWHSAQALYQYALEIEPDNL----AVLDNYRALAKLAGNTDLA-DTLKKRIARIED 302 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +L +L +G+ + + LK A+ Q K A+ Sbjct: 303 YRGFDFYVLGHEAL---RQGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFDIAK 359 Query: 281 VILEKI 286 LEK Sbjct: 360 QALEKA 365 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 20/187 (10%) Query: 151 ATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 T A+ +L ++ G L A A + + +P + + + +W A Sbjct: 198 ETTFVAMFYRNLASDALVAGRLEDAYWLAREGVKWAPKYVPLINVAAIVHRRSGDWHSAQ 257 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENA----DKGDMIASYHDAIESLKLCDNSIMASI 264 + + N A+L R+L D D + IE + + Sbjct: 258 ALYQYALEIEPD---NLAVLDNYRALAKLAGNTDLADTLKKRIARIEDYRGF-DF----Y 309 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNP--HP---EIANI-YTHLLSENTVGKLKRALRLE 318 + Q +AEV K+ K P HP E+A + + L++AL L Sbjct: 310 VLGHEALRQGNYNEAEVYFSKLLKNAPYFHPGWFELARVQAVQGKFDIAKQALEKALALS 369 Query: 319 EINKESV 325 ++++ Sbjct: 370 SRSEDAR 376 >gi|170717698|ref|YP_001784771.1| hypothetical protein HSM_1451 [Haemophilus somnus 2336] gi|168825827|gb|ACA31198.1| Tetratricopeptide TPR_2 repeat protein [Haemophilus somnus 2336] Length = 398 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 94/337 (27%), Gaps = 62/337 (18%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ------YNIAHEKLEMMLQIPA 151 + A ++H + + E LL Q + Y+ A +++ P Sbjct: 91 GEVDRALRIHQALDSSPNYTFEQ--KLLAKQ--QLAKDFLTIGFYDRAENLYILLIDEPN 146 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 E A+ L + + A A K ISP A+ Y Sbjct: 147 YAENALQQLAVIYQKTKEWKKAINVAEKLAKISPT--EDNIALAHYYCE----------- 193 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +D+ + H ++L + S+ ASI A+ I Sbjct: 194 -------------------YSLTLGSDEQQQAQAIHILKQALNVSKTSVRASILIAERYI 234 Query: 272 SQNKKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRAL-RLEEINKES 324 + ++A LE + + P + Y L +L L ++ Sbjct: 235 VNLEYQRAVQHLENVLIQNADYMSEILPALKYCYQELN------RLDNFELFLIRASQTG 288 Query: 325 VESLVIVSKIALEMGSID--QAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILY 380 S V ++ L A K ++ P I + QI+ A + + L Sbjct: 289 NNSAVDLALSDLIAEKDGIVAAQTKLHQQLEQNPSTFILHRFIQYQIDAAENGKAKESLI 348 Query: 381 WTQSAL--HAMPDPLWIS-DDGYLSSVWLPLSPISKT 414 + + GY + P + Sbjct: 349 LLHKIVGDRIARGFDYRCSHCGYQTHKLSWNCPSCRK 385 >gi|330816720|ref|YP_004360425.1| TPR-repeat pilus assembly protein TadD [Burkholderia gladioli BSR3] gi|327369113|gb|AEA60469.1| TPR-repeat pilus assembly protein TadD [Burkholderia gladioli BSR3] Length = 281 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 2/123 (1%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 +LL A Q + + + +L P + + GD A + + Sbjct: 88 PDTHLLRADALRATSQLDASEQFYTQLLNTP-LAARGYRGIGLIAGTRGDFARAAKMLDQ 146 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNRAILLIARSLENAD 238 A ++P + + + + A + + + K + L + + D Sbjct: 147 ATLLAPTDASTLSDLAYARMRTGDLAAARVPLMKAAELDQKNARIISNVALFLVASGHQD 206 Query: 239 KGD 241 Sbjct: 207 DAQ 209 >gi|40849912|gb|AAR95668.1| plectin 3 [Mus musculus] Length = 4521 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1375 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1434 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1435 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1494 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1495 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1535 >gi|40849928|gb|AAR95676.1| plectin 11 [Mus musculus] Length = 4543 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557 >gi|40849920|gb|AAR95672.1| plectin 7 [Mus musculus] Length = 4511 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1365 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1424 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1425 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1484 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1485 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1525 >gi|12698117|dbj|BAB21885.1| hypothetical protein [Macaca fascicularis] Length = 524 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 52/133 (39%), Gaps = 7/133 (5%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ V + +W A + ADKG+ A+ E++ Sbjct: 237 MLRCVVRSGQWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 292 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312 +L + A L +N+ ++AE +L ++ P+ A + +L + +N++ + + Sbjct: 293 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVRIQ--PDFAAAWMNLGIVQNSLKRFE 350 Query: 313 RALRLEEINKESV 325 A + + + Sbjct: 351 AAEQSYRMAIKHR 363 >gi|71278736|ref|YP_267286.1| TPR domain-containing protein [Colwellia psychrerythraea 34H] gi|71144476|gb|AAZ24949.1| TPR domain protein [Colwellia psychrerythraea 34H] Length = 917 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 6/152 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A+ + SY+S+ H V LL ++ + A + LE++ Q + + Sbjct: 760 AEAAQTIESYLSRMIKDHK---VRLLLAELY-MQFDEAKAIKHLEIINQSEQNNAVVLNN 815 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + A YA KA ++ +++ V K + AI L Sbjct: 816 LAMLELKRARPEQALLYAEKAFELKSGIHQISDTYGAALVTVKNFDSAIIVLLNAINQGS 875 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIE 251 E + + ++ K D + + D+I+ Sbjct: 876 EAET--TYVNLTKAYLATGKTDKVKALLDSIK 905 >gi|22298814|ref|NP_682061.1| hypothetical protein tlr1271 [Thermosynechococcus elongatus BP-1] gi|22294995|dbj|BAC08823.1| tlr1271 [Thermosynechococcus elongatus BP-1] Length = 624 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFA 156 N+ AR + V N++L LL+ QI LAE A + L + A Sbjct: 226 GNLAAARDRYQEV---LLRDNKHLRTLLQLGQICLAEEDLTGAIGYYQRCLSLDPLNSAA 282 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 L GD +A Y +A+ ++P+A V Sbjct: 283 QAGLATALLESGDPQAALPYLRQAVALNPEAEDV 316 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 77/276 (27%), Gaps = 28/276 (10%) Query: 119 EYLVYLLEVQIA---LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 E L LE + A A + +++L + +A Sbjct: 52 EQLARPLEARTAYEQAIALDPWHAPSHYRL--------AVVLHALLQQ------PAAAVP 97 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + +AL++ PD + Y+ + AI + + L L Sbjct: 98 HYQRALEVKPDWVEAHSNLGNAYLDLGDTEGAIACYQKALSLNPDLP----TTLYNLGLC 153 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 +G + + +SL L + + A V + NP Sbjct: 154 LHAQGKLTEATACYEQSLYLEPGQADVHNNLGSAYLELKNYTAATVHFQAALGANPELLV 213 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 H + HL + + L NK + +L+ + +I L + A Sbjct: 214 AHYNLGYA-LHLQGNLAAARDRYQEVLLRDNK-HLRTLLQLGQICLAEEDLTGAIGYYQR 271 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + + P S + L + + A+ Sbjct: 272 CLSLDPLNSAAQAGLATALLESGDPQAALPYLRQAV 307 >gi|320102538|ref|YP_004178129.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] gi|319749820|gb|ADV61580.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] Length = 1314 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 9/129 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-------AITFLNQKKKN 217 R G+L +A +A + PD + + W A+ L + Sbjct: 973 RRQGNLPAALDRLQRARMVRPDLAEIPRLTARLR-REPLWRNDPLNRLQALEDLQTAARL 1031 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R RA L + + + A E+L+L A++ +L+ ++ Sbjct: 1032 ESDPIR-RADDLALAAQLFLEDQKPTQALDSATEALRLDPTHPQAALTRLVALMELDRHG 1090 Query: 278 KAEVILEKI 286 + ++E Sbjct: 1091 ELIPLIEPA 1099 >gi|311108752|ref|YP_003981605.1| tetratricopeptide repeat family protein 11 [Achromobacter xylosoxidans A8] gi|310763441|gb|ADP18890.1| tetratricopeptide repeat family protein 11 [Achromobacter xylosoxidans A8] Length = 607 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 8/245 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +L +IA Y A + + + A +L F+ G+L A A Sbjct: 73 RVLASEIAAQRGMYGSAATTMLGLARDTGDPRLARRALEFQ-LAGGNLPGALDAARVWAR 131 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +SP+ + + + L+Q +N + +R++ + + D Sbjct: 132 LSPNDVEASSTELALAAANGQTKG----LSQALRNRIDSSRDKPAAIGQALAVLSRLNDR 187 Query: 243 IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT- 300 + ESL + A+ A A + +A +P E A + Sbjct: 188 RLALRILDESLSDNVRKLPAAHLALADVASASGDYTRAAQESRAALAADPKSEAAALRVL 247 Query: 301 -HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + A N + + ++++ + G + A A+ + +P Sbjct: 248 EYGYRVDPQRAQTEARAYIARNPNARKVRLMLAGQLADSGDYNGALAELQAMSRRSPEDF 307 Query: 360 IFLLL 364 L + Sbjct: 308 DLLFM 312 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 3/102 (2%) Query: 120 YLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 +L +A A Y A E + P + A+ L E D AQ A Sbjct: 206 PAAHLALADVASASGDYTRAAQESRAALAADPKSEAAALRVL--EYGYRVDPQRAQTEAR 263 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + +P+A V + Q + +++ A+ L + + E Sbjct: 264 AYIARNPNARKVRLMLAGQLADSGDYNGALAELQAMSRRSPE 305 >gi|296132604|ref|YP_003639851.1| TPR repeat-containing protein [Thermincola sp. JR] gi|296031182|gb|ADG81950.1| TPR repeat-containing protein [Thermincola potens JR] Length = 196 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 20/164 (12%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L ++ +++Y A + L+I A Y+L + ++ K L Sbjct: 51 TNL--GRVLFEQKKYEDAITCFKAALKINPNDSTAHYNLALVYFAREEWQKSRAELDKIL 108 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P+ + + + ++ + A + K + D Sbjct: 109 KAQPNHTLALLQLGEVNLKSENYEEARQTFKKCWKLEPTS--------ASALKGLGDSYV 160 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + Y A + KL + + R+A LE+ Sbjct: 161 GLKQYEKAKAAYKLALRYVP----------DYGEVREALRRLEE 194 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 7/101 (6%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 + L Q K A + K+NP H +A +Y E + + ++ + Sbjct: 54 GRVLFEQKKYEDAITCFKAALKINPNDSTAHYNLALVYF-AREEWQKSRAE-LDKILKAQ 111 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 +L+ + ++ L+ + ++A K+ P L Sbjct: 112 PNHTLALLQLGEVNLKSENYEEARQTFKKCWKLEPTSASAL 152 >gi|301772642|ref|XP_002921741.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like [Ailuropoda melanoleuca] gi|281353406|gb|EFB28990.1| hypothetical protein PANDA_010649 [Ailuropoda melanoleuca] Length = 915 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 71/191 (37%), Gaps = 10/191 (5%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHK 631 Query: 325 ---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILY 380 S +++ + E+ +A + + + P + L + + +++ Sbjct: 632 LALFNSAILMQESG-EVKLRPEARKRLLSYINEEPQDANGYFNLGMLAMDDKKDSE-AEM 689 Query: 381 WTQSALHAMPD 391 W + A+ D Sbjct: 690 WMKKAIKLQAD 700 >gi|256418964|ref|NP_958788.2| plectin isoform 1e [Mus musculus] Length = 4521 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1375 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1434 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1435 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1494 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1495 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1535 >gi|254675253|ref|NP_958793.2| plectin isoform 1b [Mus musculus] Length = 4543 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557 >gi|254675251|ref|NP_958792.2| plectin isoform 1d [Mus musculus] Length = 4511 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1365 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1424 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1425 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1484 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1485 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1525 >gi|254675201|ref|NP_958787.2| plectin isoform 1f [Mus musculus] Length = 4534 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1388 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1447 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1448 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1507 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1508 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1548 >gi|157812760|gb|ABV81125.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Mesocyclops edax] Length = 289 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + + + N + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVAESEECYNTALRLNP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYIEEATRLYLKALEVFPEFAAAHSNLASILQQQGKLNEALMHYKEAIRIQ--PAFAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ + + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMHDIQGALQCYTRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 8/166 (4%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFES 164 ++ + + H + L L I + A + + P A +L Sbjct: 42 CYNTALRLNPSHADSLNNL--ANIKREQGYIEEATRLYLKALEVFPEF-AAAHSNLASIL 98 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G LN A + +A+ I P + + A+ + + + Sbjct: 99 QQQGKLNEALMHYKEAIRIQPAFADAYSNMGNTLKEMHDIQGALQCYTRAIQINPAF--- 155 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + D G++ + +LKL N A A L Sbjct: 156 -ADAHSNLASVHKDSGNIPEAIQSYRTALKLKPNFPDAYCNLAHCL 200 >gi|168002220|ref|XP_001753812.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695219|gb|EDQ81564.1| predicted protein [Physcomitrella patens subsp. patens] Length = 565 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 67/216 (31%), Gaps = 24/216 (11%) Query: 134 RQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + ++ I +TR AVY D A YA K+L + Sbjct: 300 GDHMELNRLVHELINIDSTRPEVWVAAAVYWEM-----RDDKIRALTYADKSLRVDDRHT 354 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + A+ + + + + ++ ++ + Sbjct: 355 SAYVVKGNISLTLNRPEAAVMAFRKAQLLKADLRSYQGLVRAYLAI-----PKHKEALCA 409 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHP-----EIANIY-TH 301 A E++K S A + R KA E ++ P +A++Y Sbjct: 410 AREAMKAMPQSAKALTLVGDVYAAHQDGRDKARRFYESALRLEPTYLGSVFALADLYGME 469 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +E + L+R L+ +++ + + A + Sbjct: 470 GRTEEAILLLQRY--LKTWADDALHTKLAQIFAASD 503 >gi|153006241|ref|YP_001380566.1| hypothetical protein Anae109_3398 [Anaeromyxobacter sp. Fw109-5] gi|152029814|gb|ABS27582.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 274 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 16/178 (8%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + E G L+ A R KA+++ P + + + Y K + A++ + Sbjct: 18 RGI--ELADRGWLDEAIREFKKAIELDPSSAHAHDNLATVYSEKKLFREALSEYLTAIQL 75 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E L + D IA Y DAIE L A + +L Q K Sbjct: 76 EPESATAHYNLACFLATHGHDMA--IAEYRDAIE---LDPEYPDAHLNLGLTLADQGKAD 130 Query: 278 KAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 +A LE +++P H E+A + + + + + + ++ E+ + Sbjct: 131 EAVKELETAIRLDPKDPFPRH-ELAALLMD--EGDYRSAITQLKEVVRLEPDNFEAHL 185 >gi|145589353|ref|YP_001155950.1| cellulose synthase domain-containing protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047759|gb|ABP34386.1| cellulose synthase operon C domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 1271 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 85/252 (33%), Gaps = 52/252 (20%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWN 222 G+ A++ +AL+I D +VQ + + + A+ +N + K ++ Sbjct: 328 RGNSREAEKQFREALNIEADNGIAIRGLVQLLIDSGKQKEALALINAQAPQNSPEGKRYD 387 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEV 281 R +L A++ + KG + ++SLKL + K Sbjct: 388 YLRVKILSAQADDFIAKGQRDEAIAYLLQSLKLEP-LNPWLRFKLAGEYEDGGLQDKGLS 446 Query: 282 ILEKIWKVNPH-------------------------------PEIANIYTHLLSENTVGK 310 ++++ ++ P+ P +AN L + + + Sbjct: 447 LMKEGLRLAPNDSEMINANVLYLLSIDQSEEALLLLKASLAKPALANASLRLTYADVLNR 506 Query: 311 LKRALRL------EEINKESVESLVIVSKI--------ALEMGSIDQAHAKAMLAMKIAP 356 L+R L + E ++I AL+ G + A A A+++ P Sbjct: 507 LERDDELKPVLEQLRKAPLTGEEKGKYARIDLDYEIRQALKAGDTNTAIALLNKAVELEP 566 Query: 357 RKEIFLL-LAQI 367 L LA++ Sbjct: 567 DDVWLRLDLARL 578 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 37/234 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + L+ L+ A+ + R G A Y KAL ++P+ Sbjct: 215 GDIAAAEQPLQDTLKALPNDYLALGGMGVIRMRQGRYEEAITYYQKALTLNPENS----- 269 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +W I+ + I ++ E DK + + ++ Sbjct: 270 --------GKWKSLISTSQYWMQ-------------IHQAEEARDKKNFPLALEKIRAAI 308 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGKLK 312 L A + R+AE + + IA LL ++ K Sbjct: 309 ALEPQGAEAIAVLGTIEDDRGNSREAEKQFREALNIEADNGIAIRGLVQLLIDSGKQKEA 368 Query: 313 RALRLEEINKESVES--------LVIVSKIA--LEMGSIDQAHAKAMLAMKIAP 356 AL + + S E ++ ++ + G D+A A + ++K+ P Sbjct: 369 LALINAQAPQNSPEGKRYDYLRVKILSAQADDFIAKGQRDEAIAYLLQSLKLEP 422 >gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 432 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 6/132 (4%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G + A + +A+ I+P ++ AI +Q A Sbjct: 281 GKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINP----QDAF 336 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + D G + ++ ++ A +L + K +A ++ Sbjct: 337 AWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKACDQAI 396 Query: 288 KVNPHPEIANIY 299 +N P+ A + Sbjct: 397 SIN--PQFAEAW 406 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 13/195 (6%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G + A + +A+ I P ++ AI +Q A Sbjct: 213 GKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDP----QLAE 268 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + + D G + +++ + A +L + K +A ++ Sbjct: 269 TWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAI 328 Query: 288 KVNPHPEIA------NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +NP A +Y + + +A R IN + E+ +G Sbjct: 329 SINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANR---INPQFAEAWYNKGVALTALGKY 385 Query: 342 DQAHAKAMLAMKIAP 356 D+A A+ I P Sbjct: 386 DEAIKACDQAISINP 400 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 68/240 (28%), Gaps = 35/240 (14%) Query: 134 RQYNIAHEKL-EMMLQIPATR--------EFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 +Y+ A + + P Y E+ + D A+ I Sbjct: 145 GKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQ---------AISID 195 Query: 185 PDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P + V+ ++ AI +Q ++ A +L G Sbjct: 196 PQNAYAWYNKGTVLGIL---GKYDEAIKPFDQAISIDPQF--AEAWYNKGTALGRL--GK 248 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299 + +++ + +L K +A ++ +N P+IA + Sbjct: 249 YDEAIKACDQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQAISIN--PQIAEAWYN 306 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +K + IN + + I ++G D+A A +I P Sbjct: 307 KGVALTALGKYDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANRINP 366 >gi|297170598|gb|ADI21624.1| FOG: TPR repeat [uncultured myxobacterium HF0130_06F04] Length = 680 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 76/230 (33%), Gaps = 15/230 (6%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A + + + + + + LE+ IA + + E T A Y Sbjct: 102 DPQAAAEEPAVSEAEVSMAQQAMSRGLELSIA----DPAASLAQFEQAFSQDPTSASAAY 157 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + + G ++ AQ Y AL PD + E ++A L K Sbjct: 158 NAATLYVQQGTVDKAQDYFRNALTAKPDYAPAAAGLAILLEQQGELAQAEEVLRSTWKKT 217 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 KE A + A +G + ++ AIE+L+ + S A + Q K Sbjct: 218 KE----TVEAATALAQLFARQGRLDEAHALAIEALRADERSAHAMAALGMTYRRQGKIEL 273 Query: 279 AEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 ++ L + +++P H E+ + L + + + Sbjct: 274 SQTALSQAIEIDPNLGLAHNELGLVMVKLGLKAAANRA--FEMAVQAAPH 321 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 5/131 (3%) Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 D AS ++ S A+ AA + Q KA+ P A Sbjct: 133 ADPAASLAQFEQAFSQDPTSASAAYNAATLYVQQGTVDKAQDYFRNALTAKPDYAPAAAG 192 Query: 300 THLLSENTVGKLKRALRLEE---INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +L E + L KE+VE+ ++++ G +D+AHA A+ A++ Sbjct: 193 LAILLEQQGELAQAEEVLRSTWKKTKETVEAATALAQLFARQGRLDEAHALAIEALRAD- 251 Query: 357 RKEIFLLLAQI 367 + +A + Sbjct: 252 -ERSAHAMAAL 261 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + +G + + +L + A+ A L Q + +AE +L Sbjct: 153 ASAAYNAATLYVQQGTVDKAQDYFRNALTAKPDYAPAAAGLAILLEQQGELAQAEEVLRS 212 Query: 286 IWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE-SLVIVSKIAL--- 336 WK V +A ++ G+L A L + E S ++ + + Sbjct: 213 TWKKTKETVEAATALAQLFAR------QGRLDEAHALAIEALRADERSAHAMAALGMTYR 266 Query: 337 EMGSIDQAHAKAMLAMKIAP 356 G I+ + A++I P Sbjct: 267 RQGKIELSQTALSQAIEIDP 286 >gi|254675265|ref|NP_958796.2| plectin isoform 1a [Mus musculus] Length = 4543 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1397 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1456 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1457 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1516 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1517 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1557 >gi|254675244|ref|NP_958791.2| plectin isoform 1 [Mus musculus] Length = 4686 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1540 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1599 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1600 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1659 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1660 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1700 >gi|254675119|ref|NP_001157021.1| plectin isoform 1b2alpha [Mus musculus] Length = 4548 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1402 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1461 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1462 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1521 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1522 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1562 >gi|122065897|sp|Q9QXS1|PLEC_MOUSE RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName: Full=Plectin-1; AltName: Full=Plectin-6 Length = 4691 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1545 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1604 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1605 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1664 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1665 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1705 >gi|149277491|ref|ZP_01883632.1| TPR-repeat-containing protein [Pedobacter sp. BAL39] gi|149231724|gb|EDM37102.1| TPR-repeat-containing protein [Pedobacter sp. BAL39] Length = 562 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 10/132 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G +A + +AL ++ D V + ++ A ++ AI + N Sbjct: 316 LQSGKTEAALKQYQEALKLAEDQYGVWQKLLNVQTNAGKYQEAIQTGDAALAIFP----N 371 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLC---DNSIMASICA--AKSLISQNKKRKA 279 +AIL + + + + ++L L A + A + I + + +KA Sbjct: 372 QAILYYYYAFALHREDRNAEAKANIKQALSLDGENPEMQ-ALVLALQGEIAIDEQQFQKA 430 Query: 280 EVILEKIWKVNP 291 ++ ++ P Sbjct: 431 NQSFDQALQLAP 442 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 45/236 (19%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--- 221 GD +A K + P++ V A+ Y K A L + NA+ Sbjct: 210 MEKGDHAAALLLLKKTEEAYPESYEVELALADHYKALKNSDEAAVALRKAFSNAQMPVEQ 269 Query: 222 -----------NRNRAILLIARSLE--------------------NADKGDMIASYHDAI 250 RN A L A ++ G A+ Sbjct: 270 KVKIMMMVAADQRNPAHLSDAMAMGQVLLDTHPEDPKVREWYGDLLLQSGKTEAALKQYQ 329 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY------THLLS 304 E+LKL ++ + K ++A + + P+ I Y + Sbjct: 330 EALKLAEDQYGVWQKLLNVQTNAGKYQEAIQTGDAALAIFPNQAILYYYYAFALHREDRN 389 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVS---KIALEMGSIDQAHAKAMLAMKIAPR 357 +K+AL L+ N E ++++ +IA++ +A+ A+++AP Sbjct: 390 AEAKANIKQALSLDGENPE--MQALVLALQGEIAIDEQQFQKANQSFDQALQLAPT 443 >gi|108757611|ref|YP_630685.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108461491|gb|ABF86676.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 312 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 21/207 (10%) Query: 165 CRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 GDL A+ + L+ SP W + ++ ++ A + + +N Sbjct: 1 MAKGDLTRAETFCDLGLEFSPQYADLWSNKGIIAMSSGRQD--DAKKHFIKALR----YN 54 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + +G ++ + +LK+ +++ + A +L+ K +++ Sbjct: 55 QEHLQAYQNLGAIYMQEGAYGKAHDNFRRALKVNPDNLESRYNLALTLMKMGKMDESKKE 114 Query: 283 LEKIWKVNP-----HPEIANI-YTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKI 334 L I VNP H + I Y+ + L RA +L + + + Sbjct: 115 LRTILAVNPGISDVHHLLGIISYSKGDYDEAGEHLARATQLVQDSPLLWHD-----LGTA 169 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +E+G +A ++ P Sbjct: 170 LMELGRYQEARESFANCAQLDPSNSSC 196 >gi|40849918|gb|AAR95671.1| plectin 6 [Mus musculus] Length = 4686 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1540 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1599 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1600 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1659 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1660 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1700 >gi|71909339|ref|YP_286926.1| TPR repeat-containing protein [Dechloromonas aromatica RCB] gi|71848960|gb|AAZ48456.1| TPR repeat:Tetratricopeptide TPR_4 [Dechloromonas aromatica RCB] Length = 572 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 68/209 (32%), Gaps = 20/209 (9%) Query: 126 EVQIALAERQYNIAHEKLEMM---LQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKAL 181 QI L + + A E L T+ A L E+ R D A AL Sbjct: 362 AAQILLQQGKSEEARELLHNTRGGTVAERTQLTLAESQLLREAGRHND---AYIVLDSAL 418 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG- 240 + PD ++ + L E L K + A L A A++ Sbjct: 419 SVQPDNTE----LLYEAGLTAERIGKPELLETHLKQLLAIKPDHAHALNALGYSWAERNI 474 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN--- 297 + ++ ++L L L Q K +A LE+ +K+ PEIA Sbjct: 475 RLPEAHDLIAKALSLAPEDPFIMDSMGWVLYRQGKLTEALQTLEQAYKIKADPEIAAHLG 534 Query: 298 --IYTHLLSENTVGKLKRALRLEEINKES 324 ++ + LK A + N ++ Sbjct: 535 EVLWALDRKDEARSLLKAA---AKANPDN 560 >gi|113475394|ref|YP_721455.1| hypothetical protein Tery_1718 [Trichodesmium erythraeum IMS101] gi|110166442|gb|ABG50982.1| Tetratricopeptide TPR_4 [Trichodesmium erythraeum IMS101] Length = 799 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 99/282 (35%), Gaps = 49/282 (17%) Query: 120 YLVYLLEVQIALAERQYNIAH-------EKLE-MMLQIPATREFAVYSLYFESCRIGDLN 171 L L ++ A+ +Y A E + +L+ ++ +L G Sbjct: 371 SLSNL--AELYRAQGKYEAAEPLLLQAIEIYKIALLENHPNIAVSLSNLAELYRAQGKYE 428 Query: 172 SAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAK 219 +A+ +A++I P+ + + Y ++ A L Q K Sbjct: 429 AAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALP 488 Query: 220 EWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLC-----DNSIMASICAAKSLI 271 E + N A+ L + +G A+ AIE K+ N ++ A+ Sbjct: 489 ENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYR 548 Query: 272 SQNKKRKAEVILEKI---WKVN-P--HPEIANI--------YTHLLSENTVGKLKRAL-- 315 +Q K AE +L + +K+ P HP IA Y+ E L +A+ Sbjct: 549 AQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLTNLYYSQGKYEAAEPLLLQAIEI 608 Query: 316 ---RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L E + SL ++++ G + A + A++I Sbjct: 609 YKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEI 650 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 87/263 (33%), Gaps = 53/263 (20%) Query: 120 YLVYLLEVQIALAERQYNIAH-------EKLE-MMLQIPATREFAVYSLYFESCRIGDLN 171 L L ++ A+ +Y A E + + + P ++ +L G Sbjct: 329 SLSNL--AELYRAQGKYEAAEPLLLQAIEIYKIALPENPPNIAVSLSNLAELYRAQGKYE 386 Query: 172 SAQRYATKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAK 219 +A+ +A++I P+ + + Y ++ A L Q K Sbjct: 387 AAEPLLLQAIEIYKIALLENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALP 446 Query: 220 EWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLC-----DNSIMASICAAKSLI 271 E + N A+ L + +G A+ AIE K+ N ++ A+ Sbjct: 447 ENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYR 506 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +Q K AE +L + IY L EN + SL + Sbjct: 507 AQGKYEAAEPLLLQA---------IEIYKIALPEN--------------HPNIAVSLSNL 543 Query: 332 SKIALEMGSIDQAHAKAMLAMKI 354 +++ G + A + A++I Sbjct: 544 AELYRAQGKYEAAEPLLLQAIEI 566 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 99/307 (32%), Gaps = 56/307 (18%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATRE--------FAVYSLYFESCRIGDLNSAQRYAT 178 + A+ +Y A +I T ++ +L G +A+ Sbjct: 250 AALYFAQGKYEAAEPLYLQAFKIVKTVLPENHPNIAVSLNNLKNLYYSQGKYEAAEPLLL 309 Query: 179 KALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRA 226 +A++I P+ + + Y ++ A L Q K E N A Sbjct: 310 QAVEIYKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENPPNIA 369 Query: 227 ILLIARSLENADKGDMIAS---YHDAIESLKLC-----DNSIMASICAAKSLISQNKKRK 278 + L + +G A+ AIE K+ N ++ A+ +Q K Sbjct: 370 VSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALLENHPNIAVSLSNLAELYRAQGKYEA 429 Query: 279 AEVILEKI---WKVN-P--HPE-------IANIYTHLLSENTVGKL--KRAL----RLEE 319 AE +L + +K+ P HP +A +Y L + L E Sbjct: 430 AEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPE 489 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI--------APRKEIFLL-LAQIEQA 370 + SL ++++ G + A + A++I P + L LA++ +A Sbjct: 490 NHPNIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAVSLSNLAELYRA 549 Query: 371 NSHNTDK 377 Sbjct: 550 QGKYEAA 556 >gi|317153733|ref|YP_004121781.1| tetratricopeptide domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943984|gb|ADU63035.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio aespoeensis Aspo-2] Length = 206 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 10/130 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 D A+R A+ SP + + + L + + Sbjct: 36 LSRRDFMEAEREFLDAVAHSPRLAEGYVQLGGIAMQRGD-------LESCLSYNLQATQQ 88 Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R ++ GD ++ ++LKL + + A + I+ +A+ Sbjct: 89 RPFFSVPWGNIGFVQLQLGDTDKAHKSLKKALKLDPDFVQAQATMSSLHITTGDYEEADK 148 Query: 282 ILEKIWKVNP 291 +L++I + P Sbjct: 149 LLKQILEKYP 158 >gi|254675115|ref|NP_001157012.1| plectin isoform 12alpha [Mus musculus] Length = 4691 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1545 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1604 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1605 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1664 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1665 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1705 >gi|148697588|gb|EDL29535.1| plectin 1, isoform CRA_c [Mus musculus] Length = 4552 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1406 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1465 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1466 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1525 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1526 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1566 >gi|77461012|ref|YP_350519.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1] gi|77385015|gb|ABA76528.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 248 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 2/109 (1%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 +S L L Q A N A LE ++ +Y L GD Sbjct: 136 LSADEQLDGPVLALLTTAQQQQAGGDLNGASSSLERAQRVAPREPQVLYRLAQVRMAQGD 195 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKK 216 A++ A +AL ++ P + ++ + K+ A L ++K Sbjct: 196 APQAEQTARRALTMANGRPDLQASLWELIAQAREKQGDSAGATLARQKA 244 >gi|332242053|ref|XP_003270198.1| PREDICTED: transmembrane and TPR repeat-containing protein 4 isoform 1 [Nomascus leucogenys] Length = 741 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 8/123 (6%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ V + EW A + ADKG+ A+ E++ Sbjct: 454 MLRCVVRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 509 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 510 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 565 Query: 314 ALR 316 Sbjct: 566 FEA 568 >gi|322698940|gb|EFY90706.1| kinesin light chain 1 and, putative [Metarhizium acridum CQMa 102] Length = 645 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 80/251 (31%), Gaps = 39/251 (15%) Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI--------SPDAPWVTEAVVQQ 197 + Q +R + ++L G + A + + I PD + Sbjct: 359 LAQDHPSRLASQHALAGAYEANGQIQKAVTLLEQVVKIQETTLAQDHPDRLASQHELAGA 418 Query: 198 YVLAKEWSRAITFLNQ---------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y + +A+T L Q + + A+ ++ K + Sbjct: 419 YEANGQIQKAVTLLEQVVKIRETTLAQDHPDRLASQHALAGAYKANGQIQKAVTLLEQVV 478 Query: 249 AIESLKLC---DNSIMASICAAKSLISQNKKRKAEVILEKIWK------VNPHP------ 293 I+ L + + + A++ + + +KA +LE++ + HP Sbjct: 479 KIQETTLAQDHPDRLASQHELARAYRANGQIQKAVTLLEQVVEIEETSLAQDHPSRLASQ 538 Query: 294 -EIANIY-THLLSENTVGKLK-----RALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 E+A Y + + V L+ R L + + + + S ++ G I +A Sbjct: 539 QELARAYRANGQIQKAVTLLEQVVKIRETTLAQDHPDRLASQHALAGAYKANGQIQKAVT 598 Query: 347 KAMLAMKIAPR 357 +KI Sbjct: 599 LLEQVVKIQET 609 >gi|297694359|ref|XP_002824446.1| PREDICTED: transmembrane and TPR repeat-containing protein 4-like [Pongo abelii] Length = 612 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 8/123 (6%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ V + EW A + ADKG+ A+ E++ Sbjct: 454 MLRCVVRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 509 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 510 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 565 Query: 314 ALR 316 Sbjct: 566 FEA 568 >gi|282878026|ref|ZP_06286834.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] gi|281299861|gb|EFA92222.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] Length = 598 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 86/288 (29%), Gaps = 45/288 (15%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSA 173 NE L L ++ + A + L+ + R L G A Sbjct: 191 NEELT-LSKMSVYEMMGDKESARKTLQQLADSHPNDVNYRVMLGNWLMQH----GGQKKA 245 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + T+AL+ PD +V ++ + + +AI ++ + + + +L Sbjct: 246 YKLFTQALEEEPDNGFVLASLYDYHNQVGDKEKAIALRDRILMSKDTEIQTKMTMLQQVI 305 Query: 234 LENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +N D KGD + +K+ + AA + +S K + V+ H Sbjct: 306 RDNEDHKGDSTEVLNLFKRMMKVHPKDADIASLAA-AYMSLKKMPQDTVM-----AALQH 359 Query: 293 PEIANIYTHLLSENTVGKL------------KRALRL----EEINKESVESLVIVSKIAL 336 + +N+ +L K+ + L + + + ++ + Sbjct: 360 ------VIDIAPDNSPARLQLLRMYLPGKNWKKIIALCEEGAQFTPDEMAYYYYMAWAHV 413 Query: 337 EMGSIDQAHAKAMLAMKIAPRKE-------IFLLLAQIEQANSHNTDK 377 + +A + K + ++ + Sbjct: 414 QQDEQPKAIDALKRGVSTINDKSDTELVSEFYSMMGDLLHQQGDQQGA 461 >gi|229098867|ref|ZP_04229803.1| TPR domain protein [Bacillus cereus Rock3-29] gi|229105029|ref|ZP_04235683.1| TPR domain protein [Bacillus cereus Rock3-28] gi|229117892|ref|ZP_04247254.1| TPR domain protein [Bacillus cereus Rock1-3] gi|228665549|gb|EEL21029.1| TPR domain protein [Bacillus cereus Rock1-3] gi|228678406|gb|EEL32629.1| TPR domain protein [Bacillus cereus Rock3-28] gi|228684540|gb|EEL38482.1| TPR domain protein [Bacillus cereus Rock3-29] Length = 219 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 67/205 (32%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A + Q ++ A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKSVFEQAMQSGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L ++ + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDEDDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205 >gi|167816884|ref|ZP_02448564.1| TPR domain protein [Burkholderia pseudomallei 91] Length = 614 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 54/180 (30%), Gaps = 4/180 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 >gi|297274760|ref|XP_001094711.2| PREDICTED: transmembrane and TPR repeat-containing protein 4-like [Macaca mulatta] Length = 618 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 52/133 (39%), Gaps = 7/133 (5%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ V + +W A + ADKG+ A+ E++ Sbjct: 331 MLRCVVRSGQWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 386 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312 +L + A L +N+ ++AE +L ++ P+ A + +L + +N++ + + Sbjct: 387 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVRIQ--PDFAAAWMNLGIVQNSLKRFE 444 Query: 313 RALRLEEINKESV 325 A + + + Sbjct: 445 AAEQSYRMAIKHR 457 >gi|281350389|gb|EFB25973.1| hypothetical protein PANDA_002841 [Ailuropoda melanoleuca] Length = 759 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 7/133 (5%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ + + EW A + ADKG+ A+ E++ Sbjct: 472 MLRCMIRSGEWRNEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 527 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312 +L + A L +N+ ++AE +L ++ P+ A + +L + +N++ + + Sbjct: 528 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNLGIVQNSLKRFE 585 Query: 313 RALRLEEINKESV 325 A R + Sbjct: 586 AAERSYRTAIKHR 598 >gi|239787366|emb|CAX83842.1| TPR repeat protein [uncultured bacterium] Length = 1036 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 55/136 (40%), Gaps = 13/136 (9%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R+L+ G + + +++ + + + + +A L K + +L K + Sbjct: 18 AFERALDLQKSGQLDQAASAYEQAMAERPDHVPSLVNSAVVLRRLGKLEASLRLLYKALE 77 Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRA-LRLEEINKESVESLVIVS---KIAL---EMGS 340 ++P P + T+ +LKR + + + +S ++++ +AL E G Sbjct: 78 IDPRQPGMWQ-----NLGETLRRLKRLDEAVGAFKRAAQDSNILLAAVSGLALALKEAGQ 132 Query: 341 IDQAHAKAMLAMKIAP 356 +D+A + + P Sbjct: 133 LDEALSAMETLLAKEP 148 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 79/230 (34%), Gaps = 10/230 (4%) Query: 131 LAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 Q + A E M + P ++ + R+G L ++ R KAL+I P P Sbjct: 26 QKSGQLDQAASAYEQAMAERPD-HVPSLVNSAVVLRRLGKLEASLRLLYKALEIDPRQPG 84 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + + K A+ + +++ + +L + G + + Sbjct: 85 MWQNLGETLRRLKRLDEAVGAFKRAAQDS----NILLAAVSGLALALKEAGQLDEALSAM 140 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSEN 306 L ++ A + L + A++ LE+ ++ P + + Sbjct: 141 ETLLAKEPGNVAAWAAFSDVLFDAGQDDAAQLALERAIRLKPTSAGHHLRMAFHQSQQGQ 200 Query: 307 TVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIA 355 L +S+ S+ +++ + G +++A AM++ Sbjct: 201 YQTAEAIYRALLRQGGDSLASVHTGLAQALISQGRLEEAQPLIARAMELD 250 >gi|197129845|gb|ACH46343.1| putative tetratricopeptide repeat domain 1 variant 2 [Taeniopygia guttata] gi|197129857|gb|ACH46355.1| putative tetratricopeptide repeat domain 1 variant [Taeniopygia guttata] Length = 278 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 ++ A + + + ++RA+L R+ + A+ D ++++L + Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173 Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285 I A + A+ K +A +LEK Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKAVLEK 204 >gi|145601929|ref|XP_359458.2| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15] gi|145010394|gb|EDJ95050.1| hypothetical protein MGG_05319 [Magnaporthe oryzae 70-15] Length = 681 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 24/156 (15%) Query: 148 QIPATREFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-----VQQYVL 200 Q P + LY + G+ + A ++ KA+ + PD + + + + Sbjct: 375 QDPE--ALGLRGRSLYAQ----GENDKAIQHFRKAVSLDPDFKDAVKWLRVVQKLDRMKE 428 Query: 201 AKE-------WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 W AI + + + + +L R+L + D ++L Sbjct: 429 EGNVEYKAGKWQAAIEKYSAALQVDPDNKGTNSKILQNRALAYNKLKQYDQAIIDCEKAL 488 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 L + A A +L K A WK Sbjct: 489 SLDPSYTKARKTKATALGLAEKWEDAVR----EWKS 520 >gi|19113365|ref|NP_596573.1| complexed with Cdc5 protein Cwf4 [Schizosaccharomyces pombe 972h-] gi|15213959|sp|P87312|CLF1_SCHPO RecName: Full=Pre-mRNA-splicing factor clf1; AltName: Full=Cell cycle control protein cwf4; AltName: Full=Complexed with cdc5 protein 4 gi|7689371|gb|AAF67752.1|AF254353_1 Cwf4p [Schizosaccharomyces pombe] gi|2226422|emb|CAB10088.1| complexed with Cdc5 protein Cwf4 [Schizosaccharomyces pombe] Length = 674 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 71/248 (28%), Gaps = 48/248 (19%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK------NAKEWNRNRAILLIA 231 K L SP +++ A + + + W R I L Sbjct: 309 EKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNY 368 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E D D+ + E+LKL + A + Q K A L + Sbjct: 369 CLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRAL 428 Query: 288 KVNPHPEIANIYTHLLS--------------------------------ENTVGKLKRAL 315 + P P++ Y E +G RA Sbjct: 429 GMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRAR 488 Query: 316 RLEEINKESV--ESLVIVSKIALEMG----SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 L + E+ +V K ++ +A + ++ AP ++++ A E Sbjct: 489 ALYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKVWISFANFEI 548 Query: 370 ANSHNTDK 377 A+ + D+ Sbjct: 549 AHLEDDDE 556 >gi|22001546|sp|Q9WX63|BCSC3_ACEXY RecName: Full=Cellulose synthase 1 operon protein C; Flags: Precursor gi|4827155|dbj|BAA77587.1| bcsCI [Gluconacetobacter xylinus] Length = 1325 Score = 42.6 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 34/299 (11%), Positives = 84/299 (28%), Gaps = 75/299 (25%) Query: 110 VSQQHTFH---NEYLVYLLEVQIALA---ERQYNIAHEKLEMMLQIP--ATREFAVYSLY 161 ++H H L Q + + A + + LQI L Sbjct: 276 ALKEHMLHPPGGPPDKAGLARQAGFQQLNSGRLSAAEQSFQSALQINSHDADSLGGMGLV 335 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 S R GD A+RY +A+ P + ++ +++ + + + Sbjct: 336 --SMRQGDAAEARRYFQEAMAADPKTADRWRPALAGMEISGDYAAVRQLIAAHQYTEAKQ 393 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 L + + + A++ A + + Sbjct: 394 R------LTSLARQPG--------------------QFTGATLMLADLQRTTGQI----- 422 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + L R + + +L+ ++++ + G+ Sbjct: 423 -------------------DASEQEYRSVLAR-------DPNNQLALMGLARVDMAQGNT 456 Query: 342 DQAHAKAMLAMKIAPRK----EIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPLWI 395 +A + E+ L+A +++ ++ + + + A+ A DP W+ Sbjct: 457 AEARQLLSRVGPQYATEVGEIEVTGLMAA--ASHTSDSARKVAILREAMTQAPRDP-WV 512 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 112/352 (31%), Gaps = 57/352 (16%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 TGLM+ A+H ARK+ + V + + A ++ +L Sbjct: 480 TGLMAAASHTSDSARKVAILREAMTQAPRDPWVRINLANALQQQGDVAEAGRVMQPILAN 539 Query: 150 PAT---REFAV---YSLYFESCRI--------GDLNSA-QRYATKA-------------- 180 P T R+ + Y ++ D + A + A + Sbjct: 540 PVTAQDRQAGILYTYGAGNDAATRRLLSGLSPEDYSPAIRSIAEEMQIKEDLASRLSMVP 599 Query: 181 -------LDISPDAPWVTE--AVVQQYVLAKEWSRAITFL------------NQKKKNAK 219 ++P P AV + + A L +Q+ A Sbjct: 600 NPVPLIREALAPPDPTGARGVAVADLFRQRGDMIHARMALRIASTRTIDLSPDQRLAYAT 659 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNSIMASICAAKSLISQNKKR 277 E+ + + AR L G + + + + L + ++ + L + + Sbjct: 660 EYMKISNPVAAARLLAPLGDGSGSGAGNALLPEQQQTLQQLRMGIAVAQSDLLNQRGDQA 719 Query: 278 KAEVILEKIWKVNPH---PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +A L + +P P++A + + L L + N + +++ + Sbjct: 720 QAYDHLAPALRADPEATSPKLALARLYNGEGKSSKALDIDLAVLRHNPQDLDARQAAVQA 779 Query: 335 ALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 A+ G A AM ++ +P +L +A +QA+ H I + A Sbjct: 780 AVNSGRKSLATHLAMDGVQESPMDARAWLGMAVADQADGHGHRTIAD-LRRA 830 >gi|309379431|emb|CBX21998.1| conserved hypothetical protein [Neisseria lactamica Y92-1009] Length = 614 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 100/315 (31%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 72 LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130 Query: 184 SPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + + L E ++ + L + A + R LL+A++ D Sbjct: 131 EPIPGEAQKRMAWLRSVLKGEENQRLDGLEEILAQADDGQNRRIFLLLAQAAVQQDGLAQ 190 Query: 243 IAS-----------------------------YHDAIESL----KLCDNSIMASICAAKS 269 AS AI +L KL + ++ + Sbjct: 191 KASEAVHRAALKYEHLPEAAVADVVFNVQVREKDKAIAALQRLAKLDTEILPPTLVTLRL 250 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEI 320 + R+ IL ++ ++ ++ + ++ +LK L + Sbjct: 251 VA-----RRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLRRPDDAYERLK---VLLDA 302 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + ++ A ++ L A + A+ + Sbjct: 303 NPNAD----LYIQAAILATNRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRD 358 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 359 YAKVRQWLKK-VSAP 372 >gi|254675195|ref|NP_035247.2| plectin isoform 1c [Mus musculus] Length = 4572 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1426 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1485 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1486 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1545 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1546 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1586 >gi|254675117|ref|NP_001157014.1| plectin isoform 1c2alpha3alpha [Mus musculus] Length = 4589 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1443 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1502 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1503 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1562 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1563 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1603 >gi|229843852|ref|ZP_04463993.1| hypothetical protein CGSHi6P18H1_05421 [Haemophilus influenzae 6P18H1] gi|229812846|gb|EEP48534.1| hypothetical protein CGSHi6P18H1_05421 [Haemophilus influenzae 6P18H1] Length = 487 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 5/93 (5%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNS 172 H+ LV E +IA ++A K +L ATR A+ L FE + Sbjct: 100 HHNALVLFAEGKIANLSGDKSLAMRKYREILSANPNDNATR-LALAQLLFEQKQDNASKE 158 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + A D+ P A + +A ++ W Sbjct: 159 QFQKVLTAKDLPPQAREIVQAYLKALDERNSWD 191 >gi|254283922|ref|ZP_04958890.1| sulfotransferase [gamma proteobacterium NOR51-B] gi|219680125|gb|EED36474.1| sulfotransferase [gamma proteobacterium NOR51-B] Length = 663 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 75/245 (30%), Gaps = 29/245 (11%) Query: 126 EVQIALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + L + A E+ LQ P L + L A L Sbjct: 18 SAETYLRNGDWRNAQAVCEVGLQTFSGDPGLTWLLGRCLIGQKK----LQRADALTRDLL 73 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + PD E + ++ A N+ ++ + A +++ D+ Sbjct: 74 SMHPDLYRAQELRGDLETVTGDFESARASYNRA-RDLLPADATAAAEQLSKKQAYLDQQQ 132 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + A+ D+ A A+ +AE IL ++ + N P+ A Sbjct: 133 --EATGGALMPEGDSDDLAEAERLKAR-----GAGGEAEAILRRLVRRN--PDNAEALRQ 183 Query: 302 LLS--------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 L + + L RA E + + +++ L++G + A + + Sbjct: 184 LATMASEHFQYADAAALLTRA---VEASPRFARGWLDLARAYLDLGDYNAALESSERVVA 240 Query: 354 IAPRK 358 + P Sbjct: 241 LYPEA 245 Score = 37.2 bits (85), Expect = 5.9, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 4/168 (2%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L E + A A L +++ A+ L + A T+A++ Sbjct: 148 LAEAERLKARGAGGEAEAILRRLVRRNPDNAEALRQLATMASEHFQYADAAALLTRAVEA 207 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 SP + + Y+ +++ A+ + E +L ++S N + Sbjct: 208 SPRFARGWLDLARAYLDLGDYNAALESSERVVALYPEAADAHVVLANSQSQANLHE---- 263 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + +L + + A A L + ++ +A + NP Sbjct: 264 EAINSYSNALDIAPHHDGAFSGLAHQLKTLGRQDEAIATHRRAIAANP 311 >gi|254169311|ref|ZP_04876142.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei T469] gi|197621732|gb|EDY34316.1| tetratricopeptide repeat domain protein [Aciduliprofundum boonei T469] Length = 465 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 10/159 (6%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D SA K +S E ++ ++ AI L + K + + N RA L Sbjct: 53 DRVSALSPKEK-KTLSRILTEAGEKMLVLK----DYEYAIKTLEKAK--SLDRNNVRAWL 105 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 I R+L + + E++KL N++ A+I +L + + + A + + Sbjct: 106 DIGRNL-LERNVQIPYAVASLKEAVKLAPNNVEANILLGDALRMEGELKSALEAYFRALE 164 Query: 289 VNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 V+P + ++ N + +N V LK+ L + E Sbjct: 165 VDPENEDVINKILKIEPDN-VEVLKKYAELLKKKGNYNE 202 >gi|167535854|ref|XP_001749600.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771992|gb|EDQ85651.1| predicted protein [Monosiga brevicollis MX1] Length = 1012 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 84/236 (35%), Gaps = 16/236 (6%) Query: 130 ALAERQYNIAHEKLEMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A + + A +L++ T A L L ++ +A + + Sbjct: 231 AQL-GRLDQATAAFARVLELEPHNVTALVATAVLEMNKAEDSSLAEGKKLLKEAYSLDNN 289 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + + + + + + ++ L++ +N + RA + + + + ++ Sbjct: 290 NPNILNHLANLFFIKGAYDKVLS-LSRHAQNCRPTAAQRAETMFHMARVYHIQENYDEAF 348 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301 +++ ++ A+ I + K KA +E ++K P +A++Y Sbjct: 349 KHYYKAVHEDPAFVLPHFGVAQLYIEKRKYDKAIEHMEIVYKHQPGNYESMKVLASLYA- 407 Query: 302 LLSENTVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ + K ++ + +E+ + ++ + E QA A+K Sbjct: 408 -QQDSRTQRNKAKSLFQQITTLRPFDIEAWIELAMLH-EAEEPAQAVELYERAIKD 461 >gi|148697586|gb|EDL29533.1| plectin 1, isoform CRA_a [Mus musculus] Length = 4572 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1426 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1485 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1486 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1545 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1546 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1586 >gi|40849908|gb|AAR95666.1| plectin 1 [Mus musculus] Length = 4572 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1426 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1485 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1486 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1545 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1546 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1586 >gi|40849914|gb|AAR95669.1| plectin 4 [Mus musculus] gi|40849916|gb|AAR95670.1| plectin 5 [Mus musculus] gi|40849924|gb|AAR95674.1| plectin 9 [Mus musculus] Length = 4449 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1303 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1362 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1363 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1422 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1423 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1463 >gi|254195664|ref|ZP_04902091.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] gi|169652410|gb|EDS85103.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] Length = 614 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|107023732|ref|YP_622059.1| hypothetical protein Bcen_2185 [Burkholderia cenocepacia AU 1054] gi|116690819|ref|YP_836442.1| TPR repeat-containing protein [Burkholderia cenocepacia HI2424] gi|105893921|gb|ABF77086.1| Tetratricopeptide TPR_2 [Burkholderia cenocepacia AU 1054] gi|116648908|gb|ABK09549.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia HI2424] Length = 607 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 85/223 (38%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + D A +A++ V + + L KN + NR A L IAR Sbjct: 169 ARELARASGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D D + ++L+L + + A++ L +A I V + Sbjct: 224 QQLAVDDKD--GAAQSLKQALQLRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D+A Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDEATGY 337 Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LAQI +++ + W Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 10/154 (6%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A +L D +++ + + +S AS A L+ K Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161 Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A+ +L + P +A + + VG L + + + E+ + Sbjct: 162 ADAQPMLARELARASGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLA 220 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +++ L + D A A+++ P L+ Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQLRPDYLPAALM 254 >gi|295132916|ref|YP_003583592.1| TPR repeat protein [Zunongwangia profunda SM-A87] gi|294980931|gb|ADF51396.1| TPR repeat protein [Zunongwangia profunda SM-A87] Length = 686 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 35/208 (16%) Query: 138 IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 A E ++Q A+ + + ++A Y +AL+ SP P + Sbjct: 104 KAKEYYSDLVQRYPENFAALLGFANTLSNLKEYDNALLYVNRALETSPGNPNAMVSKKYI 163 Query: 198 YV-------LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + +E+ AI+ LN+ ++++ +R LL ++ + + + + Sbjct: 164 RLGFAYQKMQNQEYEPAISLLNKNL---EDFSGDRETLL-NKANIYLITKETEEAKNVYL 219 Query: 251 ESLKLCDNSIMA-SICAAKSLISQNKK---RKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 E K +SI+A + A + I++N+K A +EK +L ++ Sbjct: 220 ELAKNAKDSIVALNGMALAAHIAENEKEAQSLAGKAIEKA--------------EVLGDS 265 Query: 307 T---VGKLKRALRLEEINKE--SVESLV 329 T + + A L NK+ + E+ + Sbjct: 266 TSLQASRERYAQTLV-WNKDFKNAEAYI 292 >gi|291234754|ref|XP_002737312.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 1482 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 30/159 (18%) Query: 142 KLEMMLQIPATREF------AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 E M + R + +L + R + Q A KA + + + Sbjct: 792 TYEKMTESQVKRALVQDDPKKLRALERQFKREDKRRATQELARKAAESK------MQRKL 845 Query: 196 QQYVLAKEWSRAITFLNQKK-------KNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +Q + K A+ ++K + AKE RNRA+L D + Sbjct: 846 EQQEMTKR---ALETKRRRKLDSLRNIQEAKEARRNRALLAAEERRRQKDHLKFLKHQEK 902 Query: 249 A--IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +E ++L A+ ++ Q +K+K L+K Sbjct: 903 LQRLEQMRLEKE------MRAQQILEQRRKKKEAQALKK 935 >gi|224067375|ref|XP_002194200.1| PREDICTED: tetratricopeptide repeat domain 1 [Taeniopygia guttata] Length = 278 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 ++ A + + + ++RA+L R+ + A+ D ++++L + Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173 Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285 I A + A+ K +A +LEK Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKAVLEK 204 >gi|168830306|gb|ACA34403.1| hypothetical protein [uncultured bacterium pTW2] Length = 557 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 99/309 (32%), Gaps = 26/309 (8%) Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 L P +L + D +L L++ A A Q+ + + LL Sbjct: 253 LGDPVAAAAVLARGPQDDQSYSLRASLLAKA--EDKAALGKLYEALQRDSAKPDPQRRLL 310 Query: 126 EVQIALAERQYNIAHEKLEMMLQIP-----ATREFAVYSLYFESCRIGDLNSAQRYATKA 180 Q A +Y A + + R V GD A +A Sbjct: 311 LGQTAEFLERYPDALQWYRSVPGGDQRWQARLRAAGV----LHKLERGDEAYADLRQLQA 366 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + + + + ++ + A + A LL AR+L + Sbjct: 367 DAAADEDARRNAYLFEAELRQQDGNGAGEL--DAYARGLAAFPDDAALLYARALGWERRD 424 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK--AEVILEKIWKVNP-HPEI-- 295 D+ + D L +++ A++ A ++ R A ++++ P +P I Sbjct: 425 DIARAEADFRRILVAEPDNV-AALNALGYTLADRTTRYTEALQLIDRARVAEPDNPAIID 483 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L++ E + ++ G D+A Sbjct: 484 SYGWVLYRLGRNDEALVELRRAFALQK----DPEIAAHLGEVLWVKGDKDEARRFFEQGR 539 Query: 353 KIAPRKEIF 361 K+ P Sbjct: 540 KLDPDNRAL 548 >gi|148697587|gb|EDL29534.1| plectin 1, isoform CRA_b [Mus musculus] Length = 4584 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1438 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1497 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1498 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1557 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1558 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1598 >gi|71734225|ref|YP_273266.1| TPR domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554778|gb|AAZ33989.1| TPR domain protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 604 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 122 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 178 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 179 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 237 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 238 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 294 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 295 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 344 >gi|283850585|ref|ZP_06367873.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] gi|283574156|gb|EFC22128.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] Length = 1155 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 24/201 (11%), Positives = 62/201 (30%), Gaps = 7/201 (3%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + G+ +A + +A P + Q + A + A + Sbjct: 280 ALMAGEPGTAGTWLAEASARDPGSVAAASLTAQMALFENRREEARAQADALLARAPDS-- 337 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + L D+ + +L L + A++ A+ + ++ A + Sbjct: 338 --ALAQVTAGLAAMAAFDLPRAKAAFARALVLDPGFVAAAVYLARIELGSDELEAAWATI 395 Query: 284 EKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K P + + L + G + ++ ++ + + +A G Sbjct: 396 SKALAAAPGEAVVQATAGFVRLGFRDFKGAEAFFNKAAALDPGLGDARLGLGYVAYSRGQ 455 Query: 341 IDQAHAKAMLAMKIAPRKEIF 361 + + A ++PR + Sbjct: 456 KALGLEQMLGATLLSPRLSLL 476 >gi|260887572|ref|ZP_05898835.1| putative lipoprotein [Selenomonas sputigena ATCC 35185] gi|260862747|gb|EEX77247.1| putative lipoprotein [Selenomonas sputigena ATCC 35185] Length = 443 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%) Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + A + R++ A +G+ + D +L+L S A A + Sbjct: 282 AEKKLAEKKNAAAYVYRAIVFAKRGESERAAADLEAALRLSPKSAAALYDRALFFTAAGD 341 Query: 276 KRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVI 330 +++A+ LE + K P+ + +L + ++ R+ + +S + Sbjct: 342 EKRAKADLEALIKAQ--PDFVYAWYNLGVMNLKAGRNNAAMRDFERVLALVPQSANAQSN 399 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + +A A +I Sbjct: 400 IGIALVREKKYREAWRAFAQAAEINTT 426 >gi|254883031|ref|ZP_05255741.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA] gi|254835824|gb|EET16133.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA] Length = 284 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 LNQK +++ +++NR L AR+ + + D E+ KL Sbjct: 178 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 237 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295 + + + +SQ KKR+A V EK ++ P PE+ Sbjct: 238 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 276 >gi|224144666|ref|XP_002325368.1| predicted protein [Populus trichocarpa] gi|222862243|gb|EEE99749.1| predicted protein [Populus trichocarpa] Length = 873 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 144 EMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 E + P R Y + GD++ A RY ++++ P+ + Y+ Sbjct: 8 EALRLQP--RFAECYGNMANAWKEKGDIDRAIRYYLVSIELRPNFADAWSNLASAYMRKG 65 Query: 203 EWSRAITFLNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + A Q + + N L+ A+ L + +Y +E+L++ + Sbjct: 66 RLNEASQCCRQALALNPLLVDAHSNLGNLMKAQGL-------VQEAYSCYLEALRIQPSF 118 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTHL-LSENTVGKLKR 313 +A A + +A ++ K+ P P+ + N+Y L + + + +R Sbjct: 119 AIAWSNLAGLFMESGDLNRALQYYKEAVKLKPKFPDAYLNLGNVYKALGMPQEAIMCYQR 178 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQA 344 A + + ++ E G ++ A Sbjct: 179 A---VQTRPNYAMAFGNLASTCYERGQVELA 206 >gi|194373325|emb|CAM32586.2| N-acetylglucosaminyl transferase protein [Herbaspirillum seropedicae] Length = 391 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 10/164 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREF----AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + +L P A+Y L + + G L+ A+ + +D A Sbjct: 84 GETERAIRVHQNLLARPDLPAEHHGHALYELGQDYLKAGLLDRAEESFNRLIDTQYSAQ- 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIARSLENADKGDMIASYHD 248 A+++ Y KEW RAI+ + R A + + + + A+ Sbjct: 143 AGRALLEIYQREKEWERAISAAEILQATGAGGRQREIAQFYCELAADELVRTNTEAAMAL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 ++L S+ A++ +L ++ A + W+ H Sbjct: 203 LEKALAADRKSVRATMLMGDALRARGDIEGAL----ETWRRVEH 242 >gi|158337072|ref|YP_001518247.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017] Length = 594 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 72/242 (29%), Gaps = 34/242 (14%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL AA N P A + + V Q+ + E YL + A + A + ++ Sbjct: 300 LNRGLAFAAAKNYPAALQDFNQVLQRDAKNPEA--YLNRGRAHAASGNHLAAIQDYGQVI 357 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + A ++ ++GD +A +KAL + P + A Sbjct: 358 KFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQGNSQDA 417 Query: 208 ITFLNQKKK------------------------------NAKEWNRNRAILLIARSLENA 237 I + A +N + R + ++ Sbjct: 418 IADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHS 477 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 G A+ D + LKL A +Q + A + + N PE A Sbjct: 478 TAGQNEAAIADYSQVLKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEAN--PENAT 535 Query: 298 IY 299 Y Sbjct: 536 AY 537 >gi|126332161|ref|XP_001367572.1| PREDICTED: similar to KIAA0155 [Monodelphis domestica] Length = 1168 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 41/305 (13%), Positives = 102/305 (33%), Gaps = 41/305 (13%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + +L+ L + G+ A + +AL I+ D P + ++ Sbjct: 518 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 577 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA-----------RSLENADKGDMIASYHDA 249 +EW + K N ++L + R E +K + Sbjct: 578 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREK-EKRHQDRALAIY 636 Query: 250 IESLKLCD-NSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIY 299 + L+ N A ++ A K + + R+A + +W +A+IY Sbjct: 637 KQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIY 691 Query: 300 THLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ + + ++ E ++ +++ + G + + + A +AP Sbjct: 692 VEQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAPS 749 Query: 358 KEIFL 362 + + Sbjct: 750 DTVLM 754 >gi|48475086|gb|AAT44155.1| 'hypothetical protein, contains pentrtricopeptide (PPR) repeat' [Oryza sativa Japonica Group] gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group] Length = 836 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 15/105 (14%) Query: 190 VTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARSLENAD-KG 240 +AV+ A+EW AI + + + R + R+ + + Sbjct: 118 AKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRA 177 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A+++ L + A A +L+ Sbjct: 178 VHAYALKLALDAHPLVPGFL------AGMYAENADVAAATRVLDA 216 >gi|66564764|ref|XP_396165.2| PREDICTED: anaphase-promoting complex subunit 7 [Apis mellifera] Length = 571 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 57/215 (26%), Gaps = 31/215 (14%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 I +A Y S++ N L Q A Sbjct: 299 TGEIYVAMAYSLYASRKLGRANT-----LTAQALNLNPNDIEATI--------------- 338 Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + + E + A + A+ + P + +V V A+ + Sbjct: 339 LRGNILIEQKK---YQGALFFFRHAVQLKPYRYEPHKGLVDCLVGMHRLREALNIASGSC 395 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K R + + G A+ ++ + A A+ + Sbjct: 396 KQLGHTARVLTLYASVLMKDPVSVGKAKNLLEKALLQDEI---YLPAVYLLAEIYEQEMN 452 Query: 276 KRKAEVILEKIWKVNP----HPEIANIYTHLLSEN 306 A +LE+ ++ H + +++ + +E Sbjct: 453 LEAAIALLERQVEIQTACKLHQMLGDLWARVHNEE 487 >gi|116623654|ref|YP_825810.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226816|gb|ABJ85525.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 748 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 4/121 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD +A +A+ + P V A ++ K + R Sbjct: 611 ARGDFAAAVLPFARAVQLKPGDGEVRINYAVALGSLGRLEEAGQQIDAAIKADPKSAGAR 670 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + + +G + +E L+L + +A + AA+ S+ + A L + Sbjct: 671 NL----KGRLLERQGRPDEALKQFLEVLRLHPDFALAHLDAARIFASKGDRAAAIQHLRQ 726 Query: 286 I 286 Sbjct: 727 A 727 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 75/274 (27%), Gaps = 17/274 (6%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH----EKLEMMLQIPATREFAVY 158 A + ++ + +V + Q A + + P R Y Sbjct: 480 ANAIAAFEEAARRSPDSPVVAVNLADALTEGGQPERAIAVLNRAIRATQEDPLLR----Y 535 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L G A + + + PD + A A L Sbjct: 536 QLGITQTAAGRSAEAIAAFRQTIALDPDLAEAHNLLGAALAGAGNLDEAQRELTAALAIH 595 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A L A +GD A+ +++L I A +L S + + Sbjct: 596 PD----NADALGNLGHLLAARGDFAAAVLPFARAVQLKPGDGEVRINYAVALGSLGRLEE 651 Query: 279 AEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A ++ K +P A LK+ L + ++ + + + ++I Sbjct: 652 AGQQIDAAIKADPKSAGARNLKGRLLERQGRPDEALKQFLEVLRLHPDFALAHLDAARIF 711 Query: 336 LEMGSIDQAHAKA-MLAMKIAPRKEIFLLLAQIE 368 G A A P +A +E Sbjct: 712 ASKGDRAAAIQHLRQAAASSEPNIRR-QAVAALE 744 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 79/259 (30%), Gaps = 46/259 (17%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A +A SPD+P V + + RAI LN+ + +E +L Sbjct: 482 AIAAFEEAARRSPDSPVVAVNLADALTEGGQPERAIAVLNRAIRATQE----DPLLRYQL 537 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + G + +++ L + A +L +A+ L + H Sbjct: 538 GITQTAAGRSAEAIAAFRQTIALDPDLAEAHNLLGAALAGAGNLDEAQRELTAALAI--H 595 Query: 293 PEIANIY-----------------------THLLSENTVGKLKRALRLEEIN-------- 321 P+ A+ L + ++ A+ L + Sbjct: 596 PDNADALGNLGHLLAARGDFAAAVLPFARAVQLKPGDGEVRINYAVALGSLGRLEEAGQQ 655 Query: 322 --------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 +S + + ++ G D+A + + +++ P + L A A+ Sbjct: 656 IDAAIKADPKSAGARNLKGRLLERQGRPDEALKQFLEVLRLHPDFALAHLDAARIFASKG 715 Query: 374 NTDKILYWTQSALHAMPDP 392 + + + A A +P Sbjct: 716 DRAAAIQHLRQAA-ASSEP 733 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 96/318 (30%), Gaps = 48/318 (15%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIAL----AERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 H+ ++ L QIA QY +P T E A+Y Sbjct: 380 HAVMTDHLIQRRPPAAPL--AQIAERQEFDSNQYRGEVAAYYP-APLPKTAENALYLAVA 436 Query: 163 ESCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + DL R A + P + Q ++ A++++ AI + + + + Sbjct: 437 QVSQKSDLAKGLPRLAAEVARQKPAPAEFYVELGQAWMSARKFANAIAAFEEAARRSPDS 496 Query: 222 ---------------NRNRAILLIARSLENADK---------------GDMIASYHDAIE 251 RAI ++ R++ + G + + Sbjct: 497 PVVAVNLADALTEGGQPERAIAVLNRAIRATQEDPLLRYQLGITQTAAGRSAEAIAAFRQ 556 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI------YTHLLSE 305 ++ L + A +L +A+ L + HP+ A+ + Sbjct: 557 TIALDPDLAEAHNLLGAALAGAGNLDEAQRELTAALAI--HPDNADALGNLGHLLAARGD 614 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL-LL 364 L R ++ E + + +G +++A + A+K P+ L Sbjct: 615 FAAAVLP-FARAVQLKPGDGEVRINYAVALGSLGRLEEAGQQIDAAIKADPKSAGARNLK 673 Query: 365 AQIEQANSHNTDKILYWT 382 ++ + + + + Sbjct: 674 GRLLERQGRPDEALKQFL 691 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 54/196 (27%), Gaps = 24/196 (12%) Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGD-------MIASYHDAIESL------KLCDNS 259 + ++ A +NR A + + N D I ++ + + Sbjct: 335 RGEQAALHYNRVCAQCHASVAAANHPASADCVGCHMPRRRTQDVIHAVMTDHLIQRRPPA 394 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLK 312 + A + N+ R + P P+ +A S+ G + Sbjct: 395 APLAQIAERQEFDSNQYRGEV----AAYYPAPLPKTAENALYLAVAQVSQKSDLAKGLPR 450 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 A + E V + + + A A A + +P + + Sbjct: 451 LAAEVARQKPAPAEFYVELGQAWMSARKFANAIAAFEEAARRSPDSPVVAVNLADALTEG 510 Query: 373 HNTDKILYWTQSALHA 388 ++ + A+ A Sbjct: 511 GQPERAIAVLNRAIRA 526 >gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [Methanocaldococcus infernus ME] gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME] Length = 534 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 67/190 (35%), Gaps = 21/190 (11%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G A KA+ + P+ P + + +AI ++ K + N A Sbjct: 16 EGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIK--LDPNNPAA 73 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 A SL ++ + +++KL N+ A A SL + KA +K Sbjct: 74 WYYKADSLYKLER--YEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKA 131 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 K++P+ A Y ++ L ++ K ES + AL+ +A Sbjct: 132 IKLDPNNPAAWYYKGII-------------LAKLGKHEEESK--KYEKALD--KYKEAIE 174 Query: 347 KAMLAMKIAP 356 ++I P Sbjct: 175 CFKKVLEIDP 184 >gi|167837462|ref|ZP_02464345.1| TPR domain protein [Burkholderia thailandensis MSMB43] Length = 331 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 69/234 (29%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + E L + + Sbjct: 83 GRLDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + A+ Sbjct: 143 LGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGDTDEAVAHFRAALAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + +L L +A A +L + + R A Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAQALRAFESALALQPRFPLALFGLANALAALGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L + L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 312 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 24/216 (11%), Positives = 63/216 (29%), Gaps = 9/216 (4%) Query: 92 LMSIAAHNIPLARKMHSYV-----SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 L N A++ H + ++ A +++ A Sbjct: 104 LAHYNLGNAYAAQERHDDAVDAFERALALTPGDASIHNNLGNALNALGRHDGALAAFRRA 163 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L++ A +L +GD + A + AL P + ++ Sbjct: 164 LELRPGHAGAHNNLGMALAALGDTDEAVAHFRAALAAEPRFVAAHFNLGNALDAVGRHAQ 223 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A+ + + L + A G + ++ L + ++A + Sbjct: 224 ALRAFESALALQPRFP----LALFGLANALAALGRHRDALPHYERAVGLDPSFVLAWLNL 279 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + A ++ +++P +A ++ + Sbjct: 280 GTAHHALGAHEMALRAFDQALRLDPSHALAQMHRAV 315 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 57/199 (28%), Gaps = 11/199 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R G L+ A+ AL +P A + + E Sbjct: 11 AHRAGRLDDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 66 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A L + G + + +L L +A + +Q + A Sbjct: 67 NDAALQLNLGNAFKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 126 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E+ + P H + N L + L R E+ + + + Sbjct: 127 ERALALTPGDASIHNNLGNALNALGRHDGA--LAAFRRALELRPGHAGAHNNLGMALAAL 184 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G D+A A A+ PR Sbjct: 185 GDTDEAVAHFRAALAAEPR 203 >gi|159462574|ref|XP_001689517.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii] gi|158283505|gb|EDP09255.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii] Length = 929 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 18/147 (12%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAK-------EWSRAI 208 + GD A KA+D++P P ++ + YV ++ RA Sbjct: 241 RGQARSAL--GDHEGALADLQKAIDLAPLFGGPDSAQSRAECYVEKGMIYQKMRDYRRAC 298 Query: 209 TFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 L Q K + + L + S + G + +Y A+E L + Sbjct: 299 RELQQAVKLDGSNAQAWNVLGLCSTSQGDIRDG--VRAYEKAVE---LNPKLKEGWVNMG 353 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPE 294 ++L + + ++AE +L K ++P P+ Sbjct: 354 QALKEEGRTKEAERVLLKALALDP-PD 379 >gi|169625073|ref|XP_001805941.1| hypothetical protein SNOG_15803 [Phaeosphaeria nodorum SN15] gi|111055778|gb|EAT76898.1| hypothetical protein SNOG_15803 [Phaeosphaeria nodorum SN15] Length = 1139 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 75/221 (33%), Gaps = 32/221 (14%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLNQK 214 ++FE D A++ KA ++SP E + + + EW + ++ Sbjct: 300 GIFFEDYN-KDRKRARQCFQKAFELSPSEIVAAERLARLFANQGEWDIVEVVSQRVVDSG 358 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMASICAAKSLIS 272 K ++ + + +L + +L++ + + + +S + Sbjct: 359 KARQVPGSKRKGVSWPYSALGVVQMNKQEYQKSVVSFLSALRISPDDYYSYVGLGESYHN 418 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + A + + NP A+ SE+ ES + +++ Sbjct: 419 SGRYNSASRAFK--YAENP----ADNVLKKRSED----------------ESWFTKYMLA 456 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK---EIFLLLAQIEQA 370 + E+ D+A + + P++ I LL +E+ Sbjct: 457 NVNRELSEFDEALSGYEAVLATRPKEFGVSIALLQTLVEKG 497 >gi|78189724|ref|YP_380062.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3] gi|78171923|gb|ABB29019.1| TPR repeat [Chlorobium chlorochromatii CaD3] Length = 492 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 59/158 (37%), Gaps = 9/158 (5%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL Q +Y A E+ +L + ++L G+ +A++++ +++ + Sbjct: 40 LLMAQ-----GEYQQALERYRALLTTESNNAALHHALAKAYTANGEFVAARQHSQQSVTL 94 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 W ++ ++++A+ L++K + NR L + E+ Sbjct: 95 EGTNVWYLRLLIALTHNESDYAQAVA-LSKKLVTLEPDNRE---ALTMLAYEHLAARQPN 150 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L+L + + +A+ + ++ A Sbjct: 151 EALEVFQRLLQLDPANAEVLLSSAEVALELGRRSDALR 188 >gi|116191789|ref|XP_001221707.1| hypothetical protein CHGG_05612 [Chaetomium globosum CBS 148.51] gi|88181525|gb|EAQ88993.1| hypothetical protein CHGG_05612 [Chaetomium globosum CBS 148.51] Length = 710 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 27/186 (14%) Query: 123 YLLEVQIALAERQYNI-------AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 L+ + L N A L M Q P +LY + G+ + A + Sbjct: 355 QLMRGEALLKMGDANSLGEAQNIAMSLLRMNSQDPEALVLRGRALYSQ----GENDKAVQ 410 Query: 176 YATKALDISPDAPWVTEAV-----VQQ-------YVLAKEWSRAITFLNQKKKNAKEWNR 223 + KAL PD + + +++ A W A+ Sbjct: 411 HFRKALSCDPDFRDAIKWLRTVQKLERMKEDGNTQYKAGRWQAALDLYTSALDVDPANKG 470 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + +L R+L + D +++ L + A A +L K A Sbjct: 471 TNSKILQNRALCRIKLKQYDDAITDCEKAVSLDPQYMKARKTKANALGLAEKWEAAVR-- 528 Query: 284 EKIWKV 289 WK Sbjct: 529 --EWKS 532 >gi|332528608|ref|ZP_08404590.1| hypothetical protein HGR_01849 [Hylemonella gracilis ATCC 19624] gi|332041924|gb|EGI78268.1| hypothetical protein HGR_01849 [Hylemonella gracilis ATCC 19624] Length = 648 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 68/227 (29%), Gaps = 28/227 (12%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R +SA + A P++ V+Q + + L + R Sbjct: 99 ALRARAGDSALQAARDWTKAQPESAEANRYVLQILLGLNRLDDTVGPLQRALALTAPAER 158 Query: 224 NRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC------AAKSLISQNKK 276 I L ++DK + A+++ L + A + A + + + Sbjct: 159 PLLIATLPLYFSRSSDKAMAASVLEQALQAQLLDPARLPAQVMPIDKTTGAAAWSAVGRM 218 Query: 277 RKAEV----ILEKIWK------VNPHPEIANIYT---------HLLSENTVGKLKRALRL 317 R A +LE + P P + + E L R Sbjct: 219 RLAADNPAGVLEAARRGVALDPRAPEPLLLAMALLSPQLPARYAAQREEAGELLTR--HF 276 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + + + ++ +++ +A A+ + ++ P LL Sbjct: 277 ATTSSATPNLRLYYARALVDIQRYAEAQAQLKIILQAQPDLADAWLL 323 >gi|330967418|gb|EGH67678.1| TPR domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 556 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 45/276 (16%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLN 171 +F + LV LL ++A +++IA + Q P E A Y + +G Sbjct: 28 SFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAIKTQDPGISERA----YQIAEYMGADQ 83 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--------- 222 SA A +P A Q A + ++ ++ + + + + Sbjct: 84 SALETALIWARNAPRDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAA 143 Query: 223 ---------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 L+ ++L GD S +E D I Sbjct: 144 ETDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKDGEIA 202 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALR 316 + A+ L S N+ ++A +LEK K +P+ + Y +L E + Sbjct: 203 PILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAA 260 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + E ++ + LE + ++A + Sbjct: 261 LLQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 296 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 K+ Q ++ L + L + L + + A LE ++ A + A +L Sbjct: 254 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 312 Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 D SA YA + PD V + A L++ + ++ Sbjct: 313 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 370 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + + + ++LK + A +N + E Sbjct: 371 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 427 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338 L I K P +A + + A L E + L + + + Sbjct: 428 LRSIIKREPENAMALNALGYTLSDRTTRYAEARELIEKAHQISPDDPAVLDSLGWVNYRL 487 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G++D A A++ P E+ L ++ A + + AL PD Sbjct: 488 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 539 >gi|298249211|ref|ZP_06973015.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963] gi|297547215|gb|EFH81082.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963] Length = 729 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 40/129 (31%), Gaps = 6/129 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 LLE Q +Y A ++ ++ +L R+GD +A TK L Sbjct: 520 RLLEAQ-----EKYAAAADQYRELIADLPGELPPQQALARVCARMGDDLTAVELFTKVLK 574 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGD 241 P V + + W A L+ + AK + + S Sbjct: 575 ADPGNTEAVLGVTGSLLNLQRWDEAARVLSSINEAAAKYVEAQLMLCDLYLSRMVPLTPQ 634 Query: 242 MIASYHDAI 250 + S A+ Sbjct: 635 NVQSASQAV 643 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 4/129 (3%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ R G+ SA+ + +A I+P++ + + Y+ E+ A+ + + ++ A Sbjct: 453 QALRGGNYVSAESFYKQAAKINPNSVDAHLRLAEVYIDTSEFGMALAEVTKVQRMAP--G 510 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + R LE +K A+ E + + A+ A + Sbjct: 511 NWKVAWYTGRLLEAQEK--YAAAADQYRELIADLPGELPPQQALARVCARMGDDLTAVEL 568 Query: 283 LEKIWKVNP 291 K+ K +P Sbjct: 569 FTKVLKADP 577 >gi|262304969|gb|ACY45077.1| acetylglucosaminyl-transferase [Nymphon unguiculatum-charcoti complex sp. SEM-1997] Length = 288 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 6/165 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 + A + + H + L L I + A + + L++ A Sbjct: 34 GLVQEAEDCYGTALRLCPSHADSLNNL--ANIKREQGFTEEATKLYQKALEVFPEFAAAH 91 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +L + G LN A + +A+ I P + ++ A+ + + Sbjct: 92 SNLASVLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 151 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A + + D G++ + +LKL A Sbjct: 152 NPAF----ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDA 192 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVQEAEDCYGTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + ++L++ A A L Q K A + ++ ++ P A+ Sbjct: 66 EQGFTEEATKLYQKALEVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 >gi|242213697|ref|XP_002472675.1| predicted protein [Postia placenta Mad-698-R] gi|220728183|gb|EED82082.1| predicted protein [Postia placenta Mad-698-R] Length = 703 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 58/181 (32%), Gaps = 13/181 (7%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY--NIAHEKL-- 143 L L ++ + K S + N + L L + + A ++ Sbjct: 510 LAQTLWAMGTEEGRESAKAQLLQSIESDPDNLLAINTLAGMGILTDDDSLVDAALSEILA 569 Query: 144 ----EMMLQIPA---TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + + + P T + L GD+ A + KA+ + P P + + + + Sbjct: 570 LPPDQRLARDPDREVTYLLVQHHLGQRHQTQGDVQQALSVSQKAVIVEPSRPEIRQTLAE 629 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + + ++ L + + + R L + + ++ A +++ L Sbjct: 630 LVLQQGDGEGSLAVL--AATHQESLAQQRDSLYLRAIARCVNAKTQEEAHQLAHKAVMLT 687 Query: 257 D 257 Sbjct: 688 P 688 >gi|307152887|ref|YP_003888271.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7822] gi|306983115|gb|ADN14996.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822] Length = 237 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 11/161 (6%) Query: 133 ERQYNIAHEKL-EMMLQIPA-TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 Y A E + + P + + + D A KAL + PD Sbjct: 64 AGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLK--DFPKALEDFQKALQLEPDLVEA 121 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 Y+ E+ +AI K +N N A L + G+ + + + Sbjct: 122 YINRGNVYLELGEYQKAIADYTAALK----FNPNEAFAHNNIGLAYLNLGEPVRATLELT 177 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WK 288 ++++L N A + ++KA +K W+ Sbjct: 178 KAVELDPNYGEAYYNRGLAFSDVGDQQKARSDFQKAAQLWR 218 >gi|194205879|ref|XP_001501439.2| PREDICTED: similar to Interferon-induced protein with tetratricopeptide repeats 1 (IFIT-1) [Equus caballus] Length = 534 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 71/232 (30%), Gaps = 33/232 (14%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 + + L Q + +E L +++ + + + G L+ A Sbjct: 281 RLNPEDAYIKALLALKLQDVGQEAEGEKYIEEALTNTSSQTYVLRYAAKFYRKKGSLDKA 340 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 + KAL +P + +V + + + N + + N R L Sbjct: 341 LQLFKKALKATPSSAFVHHQI--GLCYRGQVIQMKKAANWQPRGQDRKNVERIARLAISH 398 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 LE +LK +A + A+ I RKAE +K+ Sbjct: 399 LEF---------------ALKEKPTLDIAYVDLAEMYIEAGDHRKAEDTYQKV------- 436 Query: 294 EIANIYTHLLSENTVGKLK----RALRLEEINKESVESLVIVSKIALEMGSI 341 + +L E + ++ R + +++ + + +E S Sbjct: 437 ----LTMKVLEEEKLQRVHFSYGRFQEFQNKSEDHAIIHYLKA-AEIENASF 483 >gi|146343872|ref|YP_001208920.1| TPR domain-containing protein [Bradyrhizobium sp. ORS278] gi|146196678|emb|CAL80705.1| putative TPR domain protein; putative O-GlcNAc transferase related protein [Bradyrhizobium sp. ORS278] Length = 652 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 79/263 (30%), Gaps = 43/263 (16%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L G L+ A + +AL + PDA +A+ + L + A ++ + A Sbjct: 99 GLAQALRLAGRLDEAIKAYDRALQLRPDAVESWDALSELLQLTGRHAEAALACDRLLQLA 158 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + RA +G + + LKL + + A+ A + + Sbjct: 159 PD----RAPTWFRLGESLEAEGRRDEAALAFEQVLKLQPDHVDAANKAGAVHFDAGRYVE 214 Query: 279 A--------------EVIL--------------------EKIWKVNPH-PEIANIYTHLL 303 A +L ++ + PH P+IAN Y +L Sbjct: 215 AIAQFDQSLRQQPDQAGVLCLKGISLRRLRRYDEAQPFGQRAHALAPHDPDIANSYGCIL 274 Query: 304 S--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + + I ++ + E+ D+A A A+ + P Sbjct: 275 QNLGRHDEAITVFEKAIAIRPQTADFHNHRGTSLAELHRFDEAFASFDRAIALRPDFADA 334 Query: 362 LLLAQIEQANSHNTDKILYWTQS 384 A + + + + W Sbjct: 335 HWNAALFRLLAGD--FARGWAAR 355 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 95/241 (39%), Gaps = 24/241 (9%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G L A+ +AL + + +A+ + V K + AI + + + ++ + Sbjct: 37 LRAGQLTKAEETCRRALTLDAASIDALQAMGRVCVALKRFDDAIEWFARAIR--QDVSVP 94 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE---- 280 + + +A++L A G + + +L+L +++ + ++ L + +A Sbjct: 95 DSFIGLAQALRLA--GRLDEAIKAYDRALQLRPDAVESWDALSELLQLTGRHAEAALACD 152 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKR------ALRLEEINKESVESLVIVSKI 334 +L+ P+ A + L E+ + +R ++ ++ + V++ + Sbjct: 153 RLLQLA------PDRAPTWFRL-GESLEAEGRRDEAALAFEQVLKLQPDHVDAANKAGAV 205 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL--AQIEQANSHNTDKILYWTQSALHAMPDP 392 + G +A A+ +++ P + L L + + ++ + AL A DP Sbjct: 206 HFDAGRYVEAIAQFDQSLRQQPDQAGVLCLKGISLRRLRRYDEAQPFGQRAHAL-APHDP 264 Query: 393 L 393 Sbjct: 265 D 265 >gi|330809222|ref|YP_004353684.1| hypothetical protein PSEBR_a2401 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377330|gb|AEA68680.1| hypothetical protein; putative TPR domain protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 394 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 4/128 (3%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + ++A+ + A+ PD + Y+L + +A L++ Sbjct: 236 GLARLEFNELEFDAAEEHLKTAVQFMPDHIGTWHLLAWIYILRGDSIQARQALDRSYA-- 293 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 +RN ++ + G + +LKL + + A A L K Sbjct: 294 --LDRNFGETHGGLAIVDVMDGMTERAQKGIRRALKLKPDGLSAHYAEALLLRQAGHPEK 351 Query: 279 AEVILEKI 286 A +++++ Sbjct: 352 AAQLIDQV 359 >gi|312080650|ref|XP_003142690.1| fic protein family protein [Loa loa] gi|307762143|gb|EFO21377.1| fic protein family protein [Loa loa] Length = 473 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLE-- 318 A++ AA +Q KAE+I++ + P HP+I Y L+ E + A L Sbjct: 120 AALKAAVQSRTQGNMAKAELIIQHALALAPHHPDILTEY-GLVVEMGRKNVVEAEELYSR 178 Query: 319 --EINKESVESLVIVSK 333 N E+L+ ++ Sbjct: 179 ALSYNPHHPEALIRRAR 195 >gi|298245328|ref|ZP_06969134.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297552809|gb|EFH86674.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 591 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 39/117 (33%), Gaps = 4/117 (3%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A +AL + P + + + +++ A+ + N A+ Sbjct: 472 PEEALASYQQALALDPRSFQAWNGLGNVHSSLLDYTGAVDAYTRAL----TVNPRSAVAW 527 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++ + G A+ E+ ++ A + A+ S ++A+ ++ Sbjct: 528 CNKAEALSRLGHNRAALDALNEATEMDKGYTRAWLLKAEVYESLGNTQEAQKARKRA 584 >gi|293376722|ref|ZP_06622945.1| tetratricopeptide repeat protein [Turicibacter sanguinis PC909] gi|292644679|gb|EFF62766.1| tetratricopeptide repeat protein [Turicibacter sanguinis PC909] Length = 416 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 74/206 (35%), Gaps = 23/206 (11%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + ++ D A++ + ++ P + + + Y+ +++ +A+ + + + E+N Sbjct: 212 AYQLNDEVEAKKVFQELKELDPSYDTIYPILAKIYLKEEDYEKALEMVAEGMTHN-EYN- 269 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + D A+ E+L L + +++ + + + + + Sbjct: 270 --AELYSIKGTALEKLKDFEAARDAYYEALNLDPEDLESALRSNRICLMLEDYEEVVHNI 327 Query: 284 EK-----------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + W ++A Y L + + + ++VE L + Sbjct: 328 KHYEENGLYDDHFTW------DLAIAYLELEEYDEAK--ACFEQGAALFADNVEFLFDYA 379 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRK 358 + +E G ++A +++ P Sbjct: 380 QFLIEEGLSNEAIKLLERILQLDPSA 405 >gi|289613279|emb|CBI59873.1| unnamed protein product [Sordaria macrospora] Length = 460 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 46/161 (28%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A +W +AI F ++ E N R+ + + DA ++++L Sbjct: 20 AAHDWPKAIEFYDKAI----ELNDKEPTFWSNRAQAHLKTEAYGYAIRDATKAIELNPGF 75 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + K+ + A Y +L+ +K + Sbjct: 76 V-------KAYYRR----------------------ATAYAAILN--PKEAVKDFKTCVK 104 Query: 320 INKESVESLVIVSK-----------IALEMGSIDQAHAKAM 349 I ++ ++ + + + A+E+G A Sbjct: 105 IAPDNKDAKLKLVECEKIVRQLAFFAAIEVGDELSAAEGLD 145 >gi|260460555|ref|ZP_05808806.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] gi|259033660|gb|EEW34920.1| TPR repeat-containing protein [Mesorhizobium opportunistum WSM2075] Length = 280 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 13/182 (7%) Query: 85 YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 Y+A L+ N A + Y N Y+ + + A Sbjct: 100 YQAYSNRALIQRFLGNQEAA--LADYNRSIQINGNYDAAYIGRGNLYRKAGRTQDAFNDF 157 Query: 144 EMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + +Q+ T A L ++S G A + A+ ++PDA Y+ Sbjct: 158 QKAIQLDTTDARAYHNRGLIYQSQ--GQHKFAIEDFSTAISLAPDAAEPYNGRGLSYLAT 215 Query: 202 KEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + A + N K + K ++L +GD + E+++L Sbjct: 216 GDEDNAFSDFNMAIKLDGKNAEAW-----ANQALIYERRGDKAKAAKSYKEAVRLNPTYQ 270 Query: 261 MA 262 A Sbjct: 271 PA 272 >gi|146306571|ref|YP_001187036.1| TPR repeat-containing protein [Pseudomonas mendocina ymp] gi|145574772|gb|ABP84304.1| Tetratricopeptide TPR_2 repeat protein [Pseudomonas mendocina ymp] Length = 250 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 6/154 (3%) Query: 135 QYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALD-ISPDAPWVT 191 L + R+ +L E R+G A ++ AL I DAP + Sbjct: 67 DSIDPERHLRALRDELEIRDTRDTRVNLADELLRMGQAEEAAKHYQIALRGIHSDAPDIL 126 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + +++ L+Q + ++ + LL AR+LE + A+ Sbjct: 127 LGLARARFALGDFAGCQASLDQLIAHNPDFRSSDGHLLYARALEGQGNDLKAEEEYRALG 186 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 S A+ A L ++R+A +L++ Sbjct: 187 SYCASPE---ANYRYALLLRRMGRQREAVDLLQQ 217 >gi|329112549|ref|NP_001192276.1| interferon-induced protein with tetratricopeptide repeats 1 [Pan troglodytes] Length = 478 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLEKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262 + + A+ ++ + KG + ++ +++ +A Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAE 280 + A+ I RKAE Sbjct: 343 HLDLARMYIEAGNHRKAE 360 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 21/146 (14%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMML----QIPAT--REFAVYSLYFESCRIGDLNSA 173 + +L ++ + + A E ML + T Y + E + D+N+ Sbjct: 340 EVAHLDLARMYIEAGNHRKAEESFRKMLCMKPVVEETMQDIHFHYGRFQEFQKKSDVNAI 399 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 Y KA+ I +Q LA++ ++I L + L Sbjct: 400 IHYL-KAIKI------------EQASLARD--KSINSLKKLVLRKLRRKALDLESLSLLG 444 Query: 234 LENADKGDMIASYHDAIESLKLCDNS 259 +G+M + +L+L + Sbjct: 445 FVYKLEGNMNEALEYYERALRLAADF 470 >gi|85077237|ref|XP_955993.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A] gi|2290382|gb|AAB65138.1| serine/threonine protein phosphatase PPT1 [Neurospora crassa] gi|28917032|gb|EAA26757.1| serine/threonine-protein phosphatase 5 [Neurospora crassa OR74A] gi|28950344|emb|CAD70968.1| phosphoprotein phosphatase (ppt-1) [Neurospora crassa] Length = 479 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 46/161 (28%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A +W +AI F ++ E N R+ + + DA ++++L Sbjct: 20 AAHDWPKAIEFYDKAI----ELNDKEPTFWSNRAQAHLKTEAYGYAIRDATKAIELNPGF 75 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + K+ + A Y +L+ +K + Sbjct: 76 V-------KAYYRR----------------------ATAYAAILN--PKEAVKDFKTCVK 104 Query: 320 INKESVESLVIVSK-----------IALEMGSIDQAHAKAM 349 I ++ ++ + + + A+E+G A Sbjct: 105 IAPDNKDAKLKLVECEKIVRQLAFFAAIEVGDELSAAEGLD 145 >gi|225717778|gb|ACO14735.1| TPR repeat-containing protein YDR161W [Caligus clemensi] Length = 350 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 29/193 (15%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E+ D AQ +AL + D P E + A E +AI FLN+ + E Sbjct: 18 EAINRYDYFEAQGLLQEALALDNDHPKALELSSFLLLEAGEVEKAIEFLNKAIRVQPEEG 77 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + L S S + + L ++ + ++A Sbjct: 78 YEKYFTLAQLSSGQ-------ESLDIYQKGITLLSRLRPSA-----------ENKRA--- 116 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKL---KRALRLEEINKESVESLVIVSKIALEMG 339 L + IA +YT L ++ ++ K +E + ++ E+L + ++ L Sbjct: 117 LSNAYIS-----IAELYTTDLCDDESAEVECTKAIQLAQEADSDNPEALQMKARYNLIKE 171 Query: 340 SIDQAHAKAMLAM 352 D+A A ++ Sbjct: 172 QFDEARAAMSESL 184 >gi|74220502|dbj|BAE31468.1| unnamed protein product [Mus musculus] Length = 463 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + +L ++ A +E L + + + + R + Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A +AL SP + ++ + + + + L Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295 Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +R+ + + ++ AI E+LKL MA +C A+ ++ +AE +K Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + H+ + + R R + +K+S + + + L++ A Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405 Query: 347 KAMLAMKIAPRKEIF 361 K + A++ + + Sbjct: 406 KLLTALEKVAERRVC 420 >gi|146279162|ref|YP_001169321.1| sulfotransferase [Rhodobacter sphaeroides ATCC 17025] gi|145557403|gb|ABP72016.1| sulfotransferase [Rhodobacter sphaeroides ATCC 17025] Length = 720 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 76/272 (27%), Gaps = 36/272 (13%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A E+ ML I A + L A + +A P V + Sbjct: 25 AGRLPEAEERYRSMLAIAPDDAAASFHLGRLLATRRAPE-ALDHLGRAARTRPQEAAVWQ 83 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A WS A R I + A I A ++ Sbjct: 84 A----------WSTAAATF------GDGAARQSVIEAAREARLPALLLQQIEGRLSAGQA 127 Query: 253 LKLCDNSI----MASICAAKSLISQNKK----RKAEVILEKIWKVNPHPEIANIY----- 299 + I A + A + + R+A IL+ P+ A Sbjct: 128 KPVAQPRIGRAAPAEVKALLTDYQAGRMPAAERRALAILKAA------PDCALAADVLGN 181 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + L R + + + +++ L +G +A A ++ + Sbjct: 182 ARMALGQPATALAAFQRATALEPGWPDGHLHLAQALLALGRPAEALDPLGRAASLSRKPA 241 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 L+L + A + L + A+ A PD Sbjct: 242 RALILLAVTLARLGRPAQALAALKRAVAAEPD 273 >gi|325473103|gb|EGC76299.1| lipoprotein [Treponema denticola F0402] Length = 598 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%) Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIANIYTH--LLSEN 306 E+ KL S++ NK +A + +K W+++ +P Y H S N Sbjct: 196 EAQKLRPQSVLTYYLLGLYKEKTNKLTEAVTLYQKAWQLDSSCYPA-GFKYGHFAAESGN 254 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 LK A L I ++ E ++ ++ + +++A + +K P LLL Sbjct: 255 GTEALKIADTLNNIYNDNTEVKLLYAQAHIAKNDLNKASENIVSILKKEPENISALLL 312 >gi|88602724|ref|YP_502902.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88188186|gb|ABD41183.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 1067 Score = 42.6 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 53/285 (18%) Query: 125 LEVQIALAER-QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L E + A E+ + P + + + +A + + L + Sbjct: 479 LNALAYEHENQKLIKASERFIELFG-PDAEVLFLLGVAQYELKQ--YEAALHHFRETLKL 535 Query: 184 SPDAP----WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---------------WNRN 224 D W +++ Y +++ AIT + N + Sbjct: 536 DKDHTDALFWAGLTLLELY----QFTEAITAFEGVEDNHPDDDQAWYYHGKALVALHELQ 591 Query: 225 RAILLIARSLEN-----------ADKGDMIASYHDAIESLKLCDNSIM----ASICAAKS 269 +A ++ SL+ AD +Y DA++S+ + AK Sbjct: 592 KAEFILKHSLQLNDQSADAWYLLADVQHTRKAYADALQSVGKALDLSPSNNEILKLKAKI 651 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLLSENTVGKLK--RALRLEEINK 322 ++ R A + + P+ ++ Y L + R RL ++ Sbjct: 652 QVALGSFRGAC----QTYAAISEPDASDTEVLTGYMRALYHTGQFREAYSRVTRLLVKDE 707 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++ + + ++I G D+A A K AP + L L I Sbjct: 708 KNPDLWRMRAEIERAQGLFDEAANALTEACKYAPNNKKLLSLQAI 752 >gi|332975002|gb|EGK11912.1| hypothetical protein HMPREF9374_1775 [Desmospora sp. 8437] Length = 446 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 16/132 (12%) Query: 165 CRIGDLNSAQRYATKALDIS-----PDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKK-N 217 R G A +YA L+++ P + + + Y+ +W +A + Sbjct: 251 QRTGVYQEAIQYAEAGLELARFNYQPSHMFDLWIVLAEVYMKQGDWEQAEECFDLALTLR 310 Query: 218 AKEWNRNRAILLIARS---LENADKGDMIASYHDAIESLKL------CDNSIMASICAAK 268 K + +R + A S L + ++++L A Sbjct: 311 GKISSSDRDKFITAYSRLGLLYMKLNRQEEAAEMLEKAIRLGESCDDVPRLTTALHLMGD 370 Query: 269 SLISQNKKRKAE 280 + QNK+ +A Sbjct: 371 FHLQQNKREEAA 382 >gi|320451054|ref|YP_004203150.1| signAl transduction histidine kinase containing a receiver domain [Thermus scotoductus SA-01] gi|320151223|gb|ADW22601.1| signAl transduction histidine kinase containing a receiver domain [Thermus scotoductus SA-01] Length = 723 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 29/165 (17%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKE----WSRAITFLNQ-------- 213 D A+ + +A+ PD + + E + +A+ L+ Sbjct: 557 DPAGAEAFLRRAVSAFPDDAEALGELAFALYLQGRHGEAKPLYEKALALLDSPDIRVRYA 616 Query: 214 ----KKKNAKEWNRNRAILLIA----------RSLENADKGDMIASYHDAIESLKLCDNS 259 K E + ++L + G + A + L + + Sbjct: 617 RLLYHMKRYGEAEASYRLVLAGDPGNLDARWGLAEVVLALGRAKEAELLARQVLAMEPSY 676 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 +A AK+L+ Q ++ +A+V+L + ++ PHPE+A + +L Sbjct: 677 PLARFTLAKALLEQGRREEAKVLLREELRLRPHPEVAELLNRVLG 721 >gi|294626105|ref|ZP_06704712.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599554|gb|EFF43684.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 562 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L A+ Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 372 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 373 ASADDDARRDAYVLEAELHQRAGDAPGELGAFERGLAAYPD----DSALLYARGLAWERR 428 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 429 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 545 RLDPDNRAL 553 >gi|289192976|ref|YP_003458917.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp. FS406-22] gi|288939426|gb|ADC70181.1| Tetratricopeptide TPR_2 repeat protein [Methanocaldococcus sp. FS406-22] Length = 284 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 20/206 (9%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L ++ D + L + PD P + ++ A+ L++ ++ Sbjct: 22 LMSKALNKIDES--IEVLEDILKVPPDHPITNFLKGLLLSITGDFENALKLLDEALESNP 79 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N AI+ ++ + S + E LK+ + A + A+ L + A Sbjct: 80 ----NNAIVKYLKAHVYEHLNVIDKSLKEYDEILKINPFLVPAWLRKAEILRKLGRYEDA 135 Query: 280 E----VILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEINKESVESLVIV 331 +LE P I Y L + EI + + +L+ Sbjct: 136 LECYNKVLEIT------PNITAFYGKALVLHKLGELEEALNCLNKALEIKPDFLLALIKK 189 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 ++I + + + +A A +I P Sbjct: 190 AQILISLNKLSEAIITLKRASEIRPD 215 >gi|209527043|ref|ZP_03275559.1| sulfotransferase [Arthrospira maxima CS-328] gi|209492554|gb|EDZ92893.1| sulfotransferase [Arthrospira maxima CS-328] Length = 514 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 41/101 (40%), Gaps = 2/101 (1%) Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q + + A ++ I +A + L + G+L+ A + ++ L Sbjct: 6 LLRQANQLKRSGKLDEAIALYHQVIDINPHFAWAYHGLGDAWAKQGNLDEAVAWYSECLK 65 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 I PD+ W+ ++ + + A+ +L + ++++ Sbjct: 66 IHPDSAWLYYSLGEVLAELGDLEAAVDYLQKAIDIKPDFHK 106 >gi|189091788|ref|XP_001929727.1| hypothetical protein [Podospora anserina S mat+] gi|188219247|emb|CAP49227.1| unnamed protein product [Podospora anserina S mat+] Length = 526 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 56/189 (29%), Gaps = 17/189 (8%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ AA + + + L Q L++ + N A + + + Sbjct: 8 LAFAAGFLSTPSMVSGLSTSDIPADTPISALLASAQSHLSKGETNDALVYYDAAIARDPS 67 Query: 153 REFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 L+ + +G + A K L I P + + A +W A Sbjct: 68 NYLT---LFKRATTYLSLGRRSQATDDFEKVLSIKPTFEGAHLQLGKLRASAADWDGAKL 124 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + KK + A + A G+ E +K D+ +I A Sbjct: 125 HYKKAKKTEEVAAVEAAKAAAKAAEAAAKAGN-------WEECVKQADD----AILTANR 173 Query: 270 LISQNKKRK 278 I + RK Sbjct: 174 AIHLRELRK 182 >gi|158338828|ref|YP_001520005.1| TPR domain-containing protein [Acaryochloris marina MBIC11017] gi|158309069|gb|ABW30686.1| TPR domain protein, putative [Acaryochloris marina MBIC11017] Length = 307 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 20/149 (13%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 +L Q + A + +L A+ L E R ++A Sbjct: 124 QVLLAQTLQKTGKRESAAQTYRSILATEPGNMDALQGFVNLLVEQQR---PSAATELLQT 180 Query: 180 ALDISPDA--------PWVTEAVV--QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 L +P A ++ Q Y +++ +A+ ++ AK+ N R + Sbjct: 181 TLKNAPQANQVKPNSINESAVQLLLGQVYATQRQFDQAVGVYDK--LIAKDPNDFRPVF- 237 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDN 258 A+++ ++G + + KL Sbjct: 238 -AKAILLREQGKTKEADILFNSAEKLAPG 265 >gi|186475487|ref|YP_001856957.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gi|184191946|gb|ACC69911.1| TPR repeat-containing protein [Burkholderia phymatum STM815] Length = 615 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 28/278 (10%), Positives = 76/278 (27%), Gaps = 16/278 (5%) Query: 72 LFHMLHKRNYDKGYKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 + R D + L L ++ L + + + + + + Sbjct: 58 VRRAADLRPQDAALQLNLGNALKALG----RLDQAIERFRNALTLAPTFPMAHYNLGNAY 113 Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 ++ A + + L++ + +L +G A +AL++ P Sbjct: 114 ALAGRHEDAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRALELRPGHAGA 173 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + A K + R + G + + Sbjct: 174 HNNMGMALNALGSATEAGAHFRAALKIEPRFVAAR----FNLANTLDATGQHEQAVTEFE 229 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSE 305 L + + A +L S + +A E+ ++P +A + L + Sbjct: 230 AVLAMQSSLPPALFGLGNALASLGRHAEARPRFERAVGLDPAFALAWLSLGAAHHALGAH 289 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + + + + + + + L +G + Sbjct: 290 DAAVRA--FDQALRLRPDLPMAHMNRGVALLTLGDFKR 325 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 4/166 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + + + A L + A++ L + G A +A D+ P Sbjct: 7 RAYSAHRDGRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRP 66 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + +AI A + L A +L G + Sbjct: 67 QDAALQLNLGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYAL----AGRHEDA 122 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +SL+L + + +L + + R+A + ++ P Sbjct: 123 VDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRALELRP 168 Score = 36.8 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 71/265 (26%), Gaps = 13/265 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + + + + L A + + A E+ L + T A Sbjct: 49 GQHEEAADLVRRAADLR--PQDAALQLNLGNALKALGRLDQAIERFRNALTLAPTFPMAH 106 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L G A K+L + P + A + Sbjct: 107 YNLGNAYALAGRHEDAVDAFQKSLRLQPMDASSHVNLGNALHALGRHREAADSFRRAL-- 164 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E A + G + +LK+ + A A +L + + Sbjct: 165 --ELRPGHAGAHNNMGMALNALGSATEAGAHFRAALKIEPRFVAARFNLANTLDATGQHE 222 Query: 278 KAEVILEK--IWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A E + + P + N L R R ++ + + + Sbjct: 223 QAVTEFEAVLAMQSSLPPALFGLGNALASLGRHAEARP--RFERAVGLDPAFALAWLSLG 280 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 +G+ D A A+++ P Sbjct: 281 AAHHALGAHDAAVRAFDQALRLRPD 305 >gi|254295602|ref|ZP_04963060.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] gi|157805565|gb|EDO82735.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] Length = 614 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|254192260|ref|ZP_04898749.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254259170|ref|ZP_04950224.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] gi|157987455|gb|EDO95231.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237] gi|254217859|gb|EET07243.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] Length = 614 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|254181068|ref|ZP_04887666.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] gi|184211607|gb|EDU08650.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] Length = 614 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|296314663|ref|ZP_06864604.1| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC 43768] gi|296838576|gb|EFH22514.1| tetratricopeptide repeat protein [Neisseria polysaccharea ATCC 43768] Length = 616 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 55/311 (17%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 74 LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132 Query: 184 SPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + + L E ++ + L + A + R LL+A++ D Sbjct: 133 EPIPGKAQKRMAWLRSVLKGEENQRLDGLEEVLVQADDGQNRRIFLLLAQAAVQQDGLAK 192 Query: 243 IASYHDAIESLKLCDNSIMASI---------------CAAKSLISQNKK----------- 276 AS +LK + A++ AA +++ Sbjct: 193 KASEAVHRAALKYE-HLPEAAVADVVFNVQVREKDKAIAALQHLAKLDTEILPPTLVTLR 251 Query: 277 ---RKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRALRLEEINKES 324 R+ IL ++ ++ ++ + ++ +LK L + N + Sbjct: 252 LVARRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLHRPDDAYERLK---VLLDANPNA 308 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHNTDKI 378 + + A+ + + + ++ A ++ L A + A+ + K+ Sbjct: 309 D----LYIQAAILAANRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMMYADRRDYAKV 364 Query: 379 LYWTQSALHAM 389 W + + A Sbjct: 365 RQWLKK-VSAP 374 >gi|149912520|ref|ZP_01901054.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b] gi|149812926|gb|EDM72752.1| Tetratricopeptide TPR_2 [Roseobacter sp. AzwK-3b] Length = 828 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 98/336 (29%), Gaps = 52/336 (15%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEY----LVYLLEVQIALAERQYNIAHEKLEM--M 146 M+I A N A + H + + N + L + + A E L+ + Sbjct: 108 MAINARNWEEAER-HGRAAAELDADNPRTRIVITALDYAKAFRDDNPVAAADEALKARDL 166 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L+ A + + R GDL++A L++ PD + +Q ++ Sbjct: 167 LEENPESLIARQLVIDQYLRSGDLDAAMAAVETGLEMHPDVFELHSTKLQIQANRQDMDA 226 Query: 207 AITFLNQKKKNAKEWNRNRAILLIAR-SLENADKGDMIASYHDAIES------------L 253 L R +L+ ++ D + A ES L Sbjct: 227 IGGTLRTMVDRFPANENTRRMLITYYIERDDLDSAEAYLRELAAAESAGKDEKLTVVRFL 286 Query: 254 KLCDNSIMA-----------------SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 + + A A + + KA +E + + A Sbjct: 287 RETKGLVAARTELERLVDTEEDDIAYRALLASIAFEEGDRAKAISDMEALLDATAAADEA 346 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 SE +L+ + V+++++ LE G+ A A+ ++ P Sbjct: 347 EAEDAAESETKQDRLR--------------ARVVLARMLLETGNTVGARAQVEEILQDDP 392 Query: 357 RKEIFLLL-AQIEQANSHNTDKILYWTQSALHAMPD 391 L + A D IL + D Sbjct: 393 TNVDALKMRAAWLIDEDKPDDAILDLRAALAEQPRD 428 Score = 37.6 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 6/98 (6%) Query: 269 SLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKESV 325 +L+ Q +A V ++K++P H E Y L +E + LR+ E ++ Sbjct: 40 ALLEQGDVARALVEFRNVFKLDPLHKEARLTYARTQLENEAYGDAYSQYLRVVEQFPDTF 99 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIA---PRKEI 360 E+ + ++++A+ + ++A A ++ PR I Sbjct: 100 EARIELAEMAINARNWEEAERHGRAAAELDADNPRTRI 137 >gi|79458493|ref|NP_567193.2| zinc ion binding [Arabidopsis thaliana] gi|75222970|sp|Q5M757|ZDH15_ARATH RecName: Full=Probable S-acyltransferase At4g00840; AltName: Full=Probable palmitoyltransferase At4g00840; AltName: Full=Zinc finger DHHC domain-containing protein At4g00840 gi|56461762|gb|AAV91337.1| At4g00840 [Arabidopsis thaliana] gi|57222210|gb|AAW39012.1| At4g00840 [Arabidopsis thaliana] gi|110738461|dbj|BAF01156.1| hypothetical protein [Arabidopsis thaliana] gi|332656544|gb|AEE81944.1| putative S-acyltransferase [Arabidopsis thaliana] Length = 291 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 12/96 (12%) Query: 2 LRLIRYFFVISLVIC-SFIIVSHYPEDVSITW-----GNRLYRTSPFVILSILYFFLFAW 55 L+++ YF ++ +V + V TW S L I F Sbjct: 10 LKVLGYFMILLVVAVVGVSYYA----VVVSTWWPILIRGDHGALSALAALIIFVFHFLLI 65 Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTG 91 +LL++ + P + R G +L G Sbjct: 66 MLLWSYFTTVFTDPGSVPEHF--RREMGGGDSLEAG 99 >gi|81428625|ref|YP_395625.1| hypothetical protein LSA1014 [Lactobacillus sakei subsp. sakei 23K] gi|78610267|emb|CAI55316.1| Hypothetical protein LCA_1014 [Lactobacillus sakei subsp. sakei 23K] Length = 421 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 41/142 (28%), Gaps = 20/142 (14%) Query: 160 LYFESCRIGDLNSAQRYATKALDI----------------SPDAPWVTEAVVQQYVLAKE 203 L+ ++ + D + A + + PD + + V + Sbjct: 22 LFQKALKEDDPETLYSLAEELYAMGFLEQASTIYQQLLAQFPDEDQIRTTLADIAVSNGQ 81 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + A+ L + + A L+ + G S + +L+L + + Sbjct: 82 YDDALNLLT----DITPESNAYAESLLTAADVYQTMGLPEVSEQKLLTALRLYPDEPVMQ 137 Query: 264 ICAAKSLISQNKKRKAEVILEK 285 A+ + KA E Sbjct: 138 FALAELYFEMGEYGKAANYYEA 159 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 80/263 (30%), Gaps = 22/263 (8%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----LYF 162 ++ + +E ++ ++ +Y A E ++ E + L Sbjct: 121 QKLLTALRLYPDEPVMQFALAELYFEMGEYGKAANYYEALI-DQDVLELGQVNIQKRLAT 179 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ-QYVLAKEWSRAITFLNQKKKNAKEW 221 G A + + + Y+ K++ +AI L + + ++ Sbjct: 180 SYASSGAFEEALQIYEIMTVEF--LTEDDQFQMGFLYLQIKDYQKAIEILTKLQLADPQY 237 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 L A+ +N + + + S + + + + AE Sbjct: 238 TSLYVYLATAQEAQNELQ----EALTAVQTGIGYDMYSEVLYQKGSDLALQLGDDQVAEQ 293 Query: 282 ILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 +L K ++NP ++ +Y + +K + E +++ Sbjct: 294 MLNKALEINPDNMGEISALSQVYRRQNRH--AENVAFVQEAIANHKPTAELYWSLAQSQF 351 Query: 337 EMGSIDQAHAKAMLA---MKIAP 356 + + D A +LA +K P Sbjct: 352 ALEAFDDARENYLLAYPELKDNP 374 >gi|313681838|ref|YP_004059576.1| diguanylate cyclase/phosphodiesterase with gaf sensor [Sulfuricurvum kujiense DSM 16994] gi|313154698|gb|ADR33376.1| diguanylate cyclase/phosphodiesterase with GAF sensor [Sulfuricurvum kujiense DSM 16994] Length = 1862 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 12/112 (10%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA---------VVQQYVLAKEWSRAIT 209 L ES A +YA A+ + P+ W +++ A+ + A+ Sbjct: 734 HLAKESL---AYEEAIKYAQAAISLFPENSWRENYEITCSIYLNLLESLSQARRYQEALV 790 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 Q N + A + R + +G + + D ++L++ + I Sbjct: 791 LFEQLLSNGLLKKIDIAKIYNLRLTYHFSQGLLSEAIEDGRQALRVLNQEIP 842 >gi|261253580|ref|ZP_05946153.1| zinc metalloprotease [Vibrio orientalis CIP 102891] gi|260936971|gb|EEX92960.1| zinc metalloprotease [Vibrio orientalis CIP 102891] Length = 491 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 13/161 (8%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A++W K+ K + ++L + D + + + +K ++ Sbjct: 296 AAQDWF--------KRTQKKVAPNLKVAFEYGKALVHLDDNQLDQAALILNDLIKQDPHN 347 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTH--LLSENTVGKLKRALR 316 + + I+Q + KAE +L++ K P+ + I Y + L E +K R Sbjct: 348 LFYLDAMSDLYIAQKQADKAESLLKQALKSAPNNAVITINYANALLKQEKNEEAVKVLQR 407 Query: 317 LEEINKESVESLVIVSKIALEMG--SIDQAHAKAMLAMKIA 355 N + V ++S+ ++ +G D A +LA+K Sbjct: 408 YTHDNPKDVNGWHLLSEASIHLGKSDEDLAARAEILALKAN 448 >gi|254673315|emb|CBA08467.1| TPR domain protein [Neisseria meningitidis alpha275] Length = 552 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 72 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 130 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 131 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 184 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +K+ KA L+++ K Sbjct: 185 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGRKKEKAIGALQRLAKLDTEILP 242 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 243 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 302 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + + A ++ + A + A+ + Sbjct: 303 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 358 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 359 YTKVRQWLKK-VSAP 372 >gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group] Length = 842 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 31/105 (29%), Gaps = 15/105 (14%) Query: 190 VTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKE---WNRNRAILLIARSLENAD-KG 240 +AV+ A+EW AI + + + R + R+ + + Sbjct: 118 AKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRA 177 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A+++ L + A A +L+ Sbjct: 178 VHAYALKLALDAHPLVPGFL------AGMYAENADVAAATRVLDA 216 >gi|186470573|ref|YP_001861891.1| tetratricopeptide TPR_4 [Burkholderia phymatum STM815] gi|184196882|gb|ACC74845.1| Tetratricopeptide TPR_4 [Burkholderia phymatum STM815] Length = 594 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 13/122 (10%) Query: 78 KRNYDKGYKA--------LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL---LE 126 +R Y++ + L G + A + + + L Y L Sbjct: 445 QRRYERALEVNPNDSLAWLLKGTLLAFEGEGEQA--VDATERALRLSPLDPLRYFYESLG 502 Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 AL+ +Y A E + L++ T + +L +GDL +A++ + L + P Sbjct: 503 ATAALSAGRYERAVELAQRSLRVNRTNTSTLRALAIAQALLGDLEAARQTVQEVLLLDPS 562 Query: 187 AP 188 Sbjct: 563 LT 564 >gi|91204151|emb|CAJ71804.1| conserved hypothetical tpr repeat protein [Candidatus Kuenenia stuttgartiensis] Length = 817 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 73/227 (32%), Gaps = 17/227 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRIGDLNSAQRYATKALDISPDAPWV 190 Y A + + L+I A Y+L Y IGD +A KA+ +P Sbjct: 433 GMYEKAEYEYKKTLEIKPNDAGAYYNLGNLYERKELIGDAIAAY---EKAIQSNPYHADA 489 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + Y K++ A+ + + R + L L + + S + Sbjct: 490 YNNIGNIYKKKKQYPAAVKMYEKAIRCNPFDFRYHSNL----GLIYLETKNYRESVDAFL 545 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSE 305 ++LK+ + L AE + +++P H + +YT++ Sbjct: 546 KALKIAPDKSSTHNSLGNVLKEMGDFDGAEEAYKTALQLDPADANIHNSLGMLYTNMKQF 605 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + ++ + + + G ++A A+ Sbjct: 606 DKAMR--EFDTAIRLDPKMASAYNNLGIAYANKGDGEKAAEALNTAV 650 >gi|50553969|ref|XP_504393.1| YALI0E25696p [Yarrowia lipolytica] gi|49650262|emb|CAG79993.1| YALI0E25696p [Yarrowia lipolytica] Length = 488 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 59/198 (29%), Gaps = 26/198 (13%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 I A + A + ++ + L L QI + A Sbjct: 162 IGAGELDQASSNVVGLLREDSSD--PLALTLRAQILYYNGEMAAAITH------------ 207 Query: 155 FAVYSLYFESCRIG-DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ R D + A+ + +I A + +++RA + Sbjct: 208 ------LQQALRNDPDNSKARTLLKQIKEIDRKREEGNSAF-----KSGQYARAKELYTE 256 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 A + R+ N GD + D +L+ + + A A++L S Sbjct: 257 TLALDPTNKLVNAKIYSNRATANVKLGDFEDALKDCDLALEADPSFVKARKTKARALGSL 316 Query: 274 NKKRKAEVILEKIWKVNP 291 K A ++ + +P Sbjct: 317 EKWEDAVNEFKQAMEADP 334 >gi|88705135|ref|ZP_01102847.1| TPR/sulfotransferase domain protein [Congregibacter litoralis KT71] gi|88700830|gb|EAQ97937.1| TPR/sulfotransferase domain protein [Congregibacter litoralis KT71] Length = 535 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 21/219 (9%) Query: 185 PDAPWVTEAVVQQ--YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P+A W+ + + + + + A Q + + ++ + + D+ Sbjct: 7 PEAVWLKAKLREGYDRLQRGDQNGAAQCCRQILQRKPDLPEGHFLV----GMIALETNDI 62 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------- 294 + KL + A A+ I + + +AE LEK H + Sbjct: 63 RTAIQGFGSVTKLQPDHGAAWAQLARIFIRRGQVNRAEDALEKA---VAHADDNPAIQDT 119 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 IA++YT L + + + + ++ ++ + + +G +A A+ Sbjct: 120 IASVYTLLGNAAAASPWQ--EKALQHQPANIGFVINRANNLMFLGDFSRARELLESAIAR 177 Query: 355 AP-RKEIFLLLAQIEQANSHNT-DKILYWTQSALHAMPD 391 P LL+ +E+A +HN + D Sbjct: 178 HPGHANAHWLLSGLEKARNHNHITVLREILDRESRNDRD 216 >gi|307206508|gb|EFN84534.1| Tetratricopeptide repeat protein 28 [Harpegnathos saltator] Length = 2105 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 26/219 (11%) Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 +H+R + +A GL + A + +A + + + FH + L Sbjct: 739 MHQRQLNLARQAADRGLEAAAYGALGIAHRATKNLDKALGFHTQELTL------RQEAGD 792 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEA 193 + + Y + + L A+ A ++ + A Sbjct: 793 LRGECRAHGNLGAV-HMAL----GQYTHAVKCYQEQLERAKELADSGVEAQ-ALGNLGIA 846 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI + Q+ + A+L AR+L N GD + D E++ Sbjct: 847 RLNM----AHYEDAIGYFEQQLATLEPLTTGTALLDKARALGNL--GDCYEALGDLEEAI 900 Query: 254 KLCDNSIMASICAA------KSLISQNKKRKAEVILEKI 286 K + + A+I ++ + R+A L++ Sbjct: 901 KCHEQQLTAAIKLKSIRDQERAYRGLGRAREATGNLQEA 939 >gi|302391014|ref|YP_003826834.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501] gi|302203091|gb|ADL11769.1| SpoIID/LytB domain protein [Acetohalobium arabaticum DSM 5501] Length = 708 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 37/263 (14%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + Y + + + +L+ + R +L +GD SA L Sbjct: 49 KARTEYYNGAYRESIKLYQEVLEKSSARIDTRKNLAVVYETVGDYKSAVNQYEAVLSTDS 108 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR---SLENADKGDM 242 D V + + Y ++++A+ + K A E+ N AIL +A + + ++ D Sbjct: 109 DEHSVYYDLGELYYSLGKYNQAL----KNTKQAVEYIENEAILKLAYLKLAQIHKERSDY 164 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIAN 297 + ++LKL +S +A + + ++ ++A ++ V ++A+ Sbjct: 165 HLALSAVKQALKLDPDSAVAYYYSGQIKDRLDQLQEAVADYKQALNKDGSFVEAQLDLAD 224 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y L K K A +L + + + G A + +I P Sbjct: 225 DYFKL------EKYKEAKKLYKK----------ILE---RNGEFKIAQTRLDRIEEIKPD 265 Query: 358 KEIFLLLAQIEQANSHNTDKILY 380 L + E + ++ Sbjct: 266 ------LFKTEAGEERSKEETRE 282 >gi|258593368|emb|CBE69707.1| exported protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 99 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Query: 5 IRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRF 64 + F ++++++ F I + +T+ +++S V++ I L A+ Sbjct: 6 LIGFLILAMIVAIFSI--QNSGEAVVTFIGWQFQSSLVVVILISTA-------LGAIMAI 56 Query: 65 FLSCPAMLFHMLHKRNYDKGYKALYTGL 92 FLS P + R + L L Sbjct: 57 FLSLPGTFRLRMRMREQAQRIAELEQQL 84 >gi|167534662|ref|XP_001749006.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772430|gb|EDQ86081.1| predicted protein [Monosiga brevicollis MX1] Length = 762 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 78/247 (31%), Gaps = 23/247 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q ++ A E L + + A+Y+L R+GDL+ A K D Sbjct: 428 NCLLAQ-----DKHAEAIEFYHEALAVDSGCFEALYNLGLAHRRLGDLDEALDCFLKLAD 482 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+ V V Y +++ ++ + A+ + + D Sbjct: 483 MLPEHAEVVYQVAAVYEELEDFDQSCEWFET--LIGLVRTDPNALRHFGELYDKLE--DK 538 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IAN 297 ++ E+ + + I I KA E+ +V P I + Sbjct: 539 SEAFKYHFEAFRYFPSDIATISWFGSYYIESQFIEKAIQYFERAAEVQPGQVKWRLMIGS 598 Query: 298 IYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALE-----MGSIDQAHAKAMLA 351 Y + + + KR RL ++VE L + +I + A +A Sbjct: 599 CYRRTGNYQQALEVYKRTHRLF---PDNVECLKFLVRICTDMDLPEAQDFAVALKRAEQM 655 Query: 352 MKIAPRK 358 + Sbjct: 656 TERKRSA 662 >gi|126737136|ref|ZP_01752871.1| TPR repeat protein [Roseobacter sp. SK209-2-6] gi|126721721|gb|EBA18424.1| TPR repeat protein [Roseobacter sp. SK209-2-6] Length = 738 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 16/140 (11%), Positives = 46/140 (32%), Gaps = 8/140 (5%) Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 ++ + + +++ L + + A + ++ + +A +LE P + Sbjct: 135 YQEQSQIDNAIALYKKAISLDPEHVNSLNNLANTYVNLGRISEALPLLETARAKAPQNAL 194 Query: 296 ANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L + + ++ ++ ++++ G + A + + Sbjct: 195 IAFNLGSAVLKTGQATRAKTLFEKAISLDPNLTQAHYNLAQLQSSAGEKELAIERFDAIL 254 Query: 353 KIAP---RKEIFLL--LAQI 367 + P R L LAQI Sbjct: 255 QENPADDRTRACRLDALAQI 274 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 17/151 (11%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 ++A KA+ + P+ + YV S A+ L + A A++ Sbjct: 142 DNAIALYKKAISLDPEHVNSLNNLANTYVNLGRISEALPLLETARAKAP----QNALIAF 197 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 G + +++ L N A A+ S +K A + I + N Sbjct: 198 NLGSAVLKTGQATRAKTLFEKAISLDPNLTQAHYNLAQLQSSAGEKELAIERFDAILQEN 257 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 P + + R L +IN Sbjct: 258 PA-------------DDRTRACRLDALAQIN 275 Score = 37.6 bits (86), Expect = 5.3, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 25/69 (36%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G A+ KA+ + P+ + Q A E AI + + +R Sbjct: 204 LKTGQATRAKTLFEKAISLDPNLTQAHYNLAQLQSSAGEKELAIERFDAILQENPADDRT 263 Query: 225 RAILLIARS 233 RA L A + Sbjct: 264 RACRLDALA 272 >gi|160897672|ref|YP_001563254.1| HemY domain-containing protein [Delftia acidovorans SPH-1] gi|160363256|gb|ABX34869.1| HemY domain protein [Delftia acidovorans SPH-1] Length = 435 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 29/112 (25%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + + + V++ W S + ++I+ Sbjct: 1 MRAALWLIGLFGMAVAAALFAGSNQGTVTLFWAPYRLDLSLNLAIAIIVLAFVLLYAALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112 L P ++ + +L L A ARK Sbjct: 61 ALAALLQMPHQARRWRSQQKERAMHHSLLEALSHQQAGRFLRARKSALAALA 112 >gi|118097266|ref|XP_414484.2| PREDICTED: similar to Tetratricopeptide repeat domain 1 [Gallus gallus] Length = 343 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 5/93 (5%) Query: 198 YVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++ A + + + ++RA+L R+ + A+ +D ++++L Sbjct: 177 QFKKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALNDCSKAVELD 236 Query: 257 DNSIMASICAAKSLISQNKKRKAE----VILEK 285 N I A + A+ K +A ILEK Sbjct: 237 PNYIRALLRRAELHEKTEKLDEALEDYKAILEK 269 >gi|332261412|ref|XP_003279766.1| PREDICTED: tetratricopeptide repeat protein 34 [Nomascus leucogenys] Length = 566 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 14/157 (8%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283 L R+L + + + D + +LKL +++ + + A++LI+Q +L Sbjct: 214 ALCGRALVHLALDQLQEAVEDIVSALKLGPGTVVPELRSLKPEAQALITQGLYSHCRALL 273 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ + L ++T G L L +IN ++++ I + GS ++ Sbjct: 274 S---------QLPDTGAPLEDKDTQGLLAVGEALIKINAGQPHWHLLLADILMARGSYEE 324 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT-DKIL 379 A A+ AP E + + + Sbjct: 325 AGTHLEKALHPAPTSEAARARLGLLRLKKGDVPGAAR 361 >gi|302534703|ref|ZP_07287045.1| secreted protein [Streptomyces sp. C] gi|302443598|gb|EFL15414.1| secreted protein [Streptomyces sp. C] Length = 514 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 71/260 (27%), Gaps = 11/260 (4%) Query: 105 KMHSYVSQQHTFHNEYLV-YLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSL 160 K + L +L Q+ A LE + PA + + ++ L Sbjct: 185 KAAQRAMDRLMELRPGLAAHLRAAQVYRDRGWREDAVVALEAAGGEAKSPAEKAYVLFRL 244 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + GD A R AL P + A+ Sbjct: 245 GELAWERGDPAEALRQYEAALRTDPSQGEALGGRARALAALGRGGEAVRDYRLALGRTPV 304 Query: 221 WNRNRAILLIARSLENADKGDMIAS--YHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 R L + L++ ++ + + A + N + + + Sbjct: 305 P---RLALELGELLDSLERPEEARAQYRSLAALAAAGAANGVNEEVVLGLYEADHGDPAQ 361 Query: 279 AEVILEKIWKVNPHPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 A L W + ++A+ + L+ A + ++ S + + I Sbjct: 362 AVRRLSAEWARHKSVQVADALGWALHKGGEDSDALEYAKKATDLGLRSADFSYHRAVIER 421 Query: 337 EMGSIDQAHAKAMLAMKIAP 356 +G A A++ P Sbjct: 422 GLGDEAAARRSLQAALRTNP 441 >gi|283850254|ref|ZP_06367543.1| response regulator receiver protein [Desulfovibrio sp. FW1012B] gi|283574280|gb|EFC22251.1| response regulator receiver protein [Desulfovibrio sp. FW1012B] Length = 447 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 7/135 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ + + D G+ + + A + L++ NS + +L K+ +A + K Sbjct: 152 LMDKGRQFLDTGNPLEAARTAKQVLEMKPNSPSGLLLMGDALRGMGKREEALRAYTQAEK 211 Query: 289 VN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 P +IA+ H NT ++K RL++++ +V+ V + +++G +D+ Sbjct: 212 GARLFLDPLKKIAS--LHHEEGNTAEEIKFLERLDKLSPLNVDRKVDIGTGYIKLGDVDK 269 Query: 344 AHAKAMLAMKIAPRK 358 A A A++IA ++ Sbjct: 270 AKAAFDQAVRIATKE 284 >gi|145220212|ref|YP_001130921.1| TPR repeat-containing protein [Prosthecochloris vibrioformis DSM 265] gi|145206376|gb|ABP37419.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeovibrioides DSM 265] Length = 567 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 71/250 (28%), Gaps = 29/250 (11%) Query: 125 LEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L IA E Y A + L+ T L E A + + L Sbjct: 115 LLATIAHQEEDYLRAIAVHRELSNLERGNTELLGY--LAMEYLAAQQPAEALKVFEEILA 172 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P + + + + AI + + +R R L GD Sbjct: 173 LDPRNEMARFHSLLLEIRMERYPEAIASIRKMMGEDGGSDRLRLTLGELY----LRTGDY 228 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKK--------RKAEVILEKIWKVNPHPE 294 + +++ + + + ++ R + L+ + K E Sbjct: 229 QKAAVTFRDAVARSPEFVPGWLALLDVSVRSGEQTVFLSDLSRYYDTSLQGLEKQL---E 285 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS---------KIALEMGSIDQAH 345 +A Y + + + A L+ +++ ES ++ AL D Sbjct: 286 LARYYLAKAANDPLYLEPSAAMLDALSRRHPESPDPLALSGFSKLSRGAALGAAE-DFRR 344 Query: 346 AKAMLAMKIA 355 A A+ K Sbjct: 345 AVAIKPEKAE 354 >gi|110626104|ref|NP_032357.2| interferon-induced protein with tetratricopeptide repeats 1 [Mus musculus] gi|13277747|gb|AAH03768.1| Interferon-induced protein with tetratricopeptide repeats 1 [Mus musculus] gi|71059781|emb|CAJ18434.1| Ifit1 [Mus musculus] gi|74139892|dbj|BAE31785.1| unnamed protein product [Mus musculus] gi|74151825|dbj|BAE29700.1| unnamed protein product [Mus musculus] gi|74185314|dbj|BAE30133.1| unnamed protein product [Mus musculus] gi|74185377|dbj|BAE30163.1| unnamed protein product [Mus musculus] gi|74186117|dbj|BAE34228.1| unnamed protein product [Mus musculus] gi|74191365|dbj|BAE30265.1| unnamed protein product [Mus musculus] gi|74191401|dbj|BAE30281.1| unnamed protein product [Mus musculus] gi|74219423|dbj|BAE29489.1| unnamed protein product [Mus musculus] gi|74219553|dbj|BAE29547.1| unnamed protein product [Mus musculus] gi|148709810|gb|EDL41756.1| interferon-induced protein with tetratricopeptide repeats 1 [Mus musculus] Length = 463 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + +L ++ A +E L + + + + R + Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A +AL SP + ++ + + + + L Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295 Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +R+ + + ++ AI E+LKL MA +C A+ ++ +AE +K Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + H+ + + R R + +K+S + + + L++ A Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405 Query: 347 KAMLAMKIAPRKEIF 361 K + A++ + + Sbjct: 406 KLLTALEKVAERRVC 420 >gi|116623288|ref|YP_825444.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226450|gb|ABJ85159.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 402 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 82/277 (29%), Gaps = 51/277 (18%) Query: 85 YKA-LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 Y+A L G++ + N A + ++Q YL E Q L Y A E Sbjct: 80 YEAELNGGIVLLRQQNPAEALPLFEDAARQKPQEFRPRYYLAESQ--LQTGDYAKAEESY 137 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 ++ + + A A + + G + A+ Y KA ++ P + Y + Sbjct: 138 KLAIGLDAKSSGAQLGMARALVQEGKVADAEVYFRKAAELEPKYREYLLQLAGLYEKGGQ 197 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + AI + +N R Sbjct: 198 TAEAIAIYREFPENGAAQARL--------------------------------------- 218 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEE 319 + L+ + K A LE+ + +P P +A Y + L + Sbjct: 219 ---GELLLEERKFEDAVPRLEEAYGKDPSPGNRSALAAAYVFTRKLDKALPL--LEQCVA 273 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ ++ ++ + A + A K+ P Sbjct: 274 AAPADYDTRMMYARALRDKRQFPAAARQFYEATKLKP 310 >gi|332992889|gb|AEF02944.1| hypothetical protein ambt_07055 [Alteromonas sp. SN2] Length = 656 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 47/172 (27%), Gaps = 8/172 (4%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKL 143 +A Y GL++ P A K+ + + + + A Sbjct: 213 QAAYQGLLA-KLGKFPQAAKVAQA----RLAQQPESFSIKVSLAHALVGVGELEEAIGIY 267 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 +L R +L GD+ A KA +PD ++ + Sbjct: 268 HSLLADKQDRPALWVALGHALKAKGDVKEAIASYEKAAAFAPDFGDAYWSLANTKTYRFD 327 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 A+ + ++ +R L A D ++ + L Sbjct: 328 -DNALAVMQLQEALETTKLDDRIHLCFALGKGFEDAKQADKAFDYYAKGNSL 378 >gi|302038431|ref|YP_003798753.1| hypothetical protein NIDE3134 [Candidatus Nitrospira defluvii] gi|300606495|emb|CBK42828.1| protein of unknown function, TPR-like [Candidatus Nitrospira defluvii] Length = 456 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 74/243 (30%), Gaps = 17/243 (6%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+ A A ++ + S N L LA+ + + A +++ Sbjct: 211 KGLLDEAIGEYRAALRLQAGGSAALYSVN------LSA-ALLAKGEVDGAIGAGRTAIRL 263 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A Y+L G++ A + L + P V V Q A E AI Sbjct: 264 QPENGDAHYNLGLALKAKGEVEGALAAFREVLKLDPGQGAVHYDVGQLLERAGESDGAIA 323 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + A ++ GD+ + +L+ SI A + Sbjct: 324 EYRAMLA----YRPTHGPAQEALAVLLQKNGDVDGAIVAYRAALQAAPKSIAAHNNLGVA 379 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIA-----NIY-THLLSENTVGKLKRALRLEEINKE 323 L+++ + +A + P IA + + + ++L E + Sbjct: 380 LLTKGRIDEALTAFRTAADLQPADPIAYYNLGEAFSAQQQRGAAIQSYRSYVKLAEAQPD 439 Query: 324 SVE 326 E Sbjct: 440 HRE 442 >gi|281357606|ref|ZP_06244093.1| Tetratricopeptide TPR_4 protein [Victivallis vadensis ATCC BAA-548] gi|281315863|gb|EFA99889.1| Tetratricopeptide TPR_4 protein [Victivallis vadensis ATCC BAA-548] Length = 781 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 4/128 (3%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + D +A++ +A+ +P P + + + A + A L K Sbjct: 564 AVLKQDSAAAEKLLREAIAAAPSLPRLYLRLAEAQEAAGKNKEAAATLETGLKAIPA--- 620 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L + +A D+ + + + + ++ + + +A Sbjct: 621 -DVELAYRAARLHALADDLEPAIRLYSRIADRYPDPELIRVNLSELYAAAGRSAEALKTA 679 Query: 284 EKIWKVNP 291 E W P Sbjct: 680 ESAWLAKP 687 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 69/252 (27%), Gaps = 11/252 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A ++ + L LL + L + A Q T + Sbjct: 464 GEFAAALELAERNRAAGGSNPGTLFQLLAAREGLGKLDEVSAEFGAARRKQPEDTALADL 523 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL--AKEWSRAITFLNQKK 215 Y + R ++ A + V +V + ++ + A L + Sbjct: 524 YLSFCVRNRR--AGELKQLAEELRQAKKTELKVLASVAEAESAVLKQDSAAAEKLLREAI 581 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A R L + + G + LK + + AA+ + Sbjct: 582 AAAPSLPR----LYLRLAEAQEAAGKNKEAAATLETGLKAIPADVELAYRAARLHALADD 637 Query: 276 KRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A + +I P PE+ + + + + LK A + + Sbjct: 638 LEPAIRLYSRIADRYPDPELIRVNLSELYAAAGRSAEALKTAESAWLAKPDWPPAQESYG 697 Query: 333 KIALEMGSIDQA 344 E G+ D+A Sbjct: 698 IRLTETGAFDRA 709 >gi|217978468|ref|YP_002362615.1| TPR repeat-containing protein [Methylocella silvestris BL2] gi|217503844|gb|ACK51253.1| TPR repeat-containing protein [Methylocella silvestris BL2] Length = 935 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 14/214 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREF 155 + A ++ + L I L + + A E + P + Sbjct: 309 GRLEDAYMAYAAALKIRPAFLPALTN--RANICLQWGRLDEAIRHCDEALRHDPKYPQAL 366 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + R+G L A A+ + P AP + A+ ++ Sbjct: 367 GLRGAALH--RLGRLEEALVSLDLAVSVRPAAPEAWLNRGNVLQEMDRLADAVASYHEAL 424 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + L + + ++GD+ + E++ + A A +L+ + Sbjct: 425 RLSPHYPE----ALSSLGVALKEQGDVDEALACFNEAIHYKPDYPDARNNRAGALLLMGR 480 Query: 276 KRKAEVILEKIWK---VNPHPEIANIYTHLLSEN 306 ++ E W P P I E+ Sbjct: 481 LKEGFRDFESRWDRSNAPPRPIIPAA-ARWTGED 513 >gi|167835380|ref|ZP_02462263.1| TPR domain protein [Burkholderia thailandensis MSMB43] Length = 606 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 93/261 (35%), Gaps = 11/261 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS--LYFESCRIGDLNSAQRYATKA 180 +L ++AL A++ + + A + + + D +A + Sbjct: 80 QVLAAEVALQRNLPAPAYQTYLALSRDTRDPRMAQRATEIALAAQSPADALTAANLWRE- 138 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 SP + + VL + + A L Q+ A +R +AI+ + L A Sbjct: 139 --YSPGSQRAAQVDAALLVLGGKPAEAQPMLAQELARATGDSRGQAIIALQALL--ARGP 194 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + + LK N A A+ ++ + K A L++ ++ P A + Sbjct: 195 NRVGGLTVLQDLLKNDMNRPEARFAIARQQLATDDKDGATQSLKEALRIKPDYLPAALML 254 Query: 301 H-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK---IAP 356 + + + + + N +S + + ++++ L +D A + + P Sbjct: 255 SQMGPDERAAGVASFEKFVQQNPKSRDGRLALAQLYLADDRLDDAQKQFDAMRRNDSSDP 314 Query: 357 RKEIFLLLAQIEQANSHNTDK 377 + + L +I+Q + + Sbjct: 315 TPLMAIALIKIQQKHLDDATA 335 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 16/166 (9%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 A + + D + E+L++ + + A++ L +A + V Sbjct: 218 FAIARQQLATDDKDGATQSLKEALRIKPDYLPAALM----LSQMGPDERAAGVASFEKFV 273 Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +P+ +A +L + K+ + + L+ ++ I ++ +D A Sbjct: 274 QQNPKSRDGRLALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDA 333 Query: 345 HAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 A +K+A +K + ++ LAQI + +N W Sbjct: 334 TAYLKQYVKVAQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDK 378 >gi|166714252|ref|ZP_02245459.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 900 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R RA L R L+ + + E+LKLC + +A+ Q + ++ Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLCADFALAANNLGFVYFRQGRFAESAR 841 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 LE K++P +A + N + K Sbjct: 842 RLETTLKIDPSRAVAYLNLGDAYANAGDREKARKA 876 >gi|159467375|ref|XP_001691867.1| Paf1 complex component [Chlamydomonas reinhardtii] gi|158278594|gb|EDP04357.1| Paf1 complex component [Chlamydomonas reinhardtii] Length = 973 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 91/276 (32%), Gaps = 24/276 (8%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 ++ + + H E L +Q A A +Y A + +L T L + Sbjct: 503 RLLNNAAVLHYRAGEVATALALLQRA-AGGEYKAAAALYKEVLSEHPTYIDCYLRLACIA 561 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA----KE 220 G+ A +A ALD + Q Y+ +++ A L Q +++ Sbjct: 562 RAKGNHKEALEFAQSALDKEGGHADALALMSQLYMERRDYEAAGKTLIQLIQDSGSKRDT 621 Query: 221 WNR---NRAILLIARSLENADKGDMIASY-HDAIESLKLCDNSIMASICAA----KSLIS 272 + R L A D+ + A++ + ++ ++ AA +L Sbjct: 622 YGRIGYANTYLYTAPKDRKEDQLRKAEARFSKALDEYRAVLDADPRNVWAANGCGAALAE 681 Query: 273 QNKKRKAEVILEKIWKVNPHPE-----------IANIYTHLLSENTVGKLKRALRLEEIN 321 A+ + +++ + +AN L R + + Sbjct: 682 LGYLDAAQSVFSEVYASMALSDGFLTIPDVLINLANCNLARCDYQDAVHLYRTALDKLEH 741 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 K + L+ +++ + + +A + A+ +AP Sbjct: 742 KHHPQVLLYLARALYDSNKLTEAQSCLKRAIHLAPT 777 >gi|21110817|gb|AAM39201.1| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str. 306] Length = 911 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L K++ R RA L R L+ + + + E+LKL + +A+ Sbjct: 781 ATLVLPAAVKSSD---RQRAQLANERGLQLYKEKRYVDAAEQFAEALKLRPDFALAANNL 837 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGK 310 Q + ++ LE K++P +A + Y + + Sbjct: 838 GFVYYRQGRFAESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKAR 885 >gi|82701720|ref|YP_411286.1| hypothetical protein Nmul_A0586 [Nitrosospira multiformis ATCC 25196] gi|82409785|gb|ABB73894.1| conserved hypothetical protein [Nitrosospira multiformis ATCC 25196] Length = 573 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 79/296 (26%), Gaps = 49/296 (16%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L L + AL I + + A +A + A Sbjct: 52 LFDFLLAETALQRGDTEIGLRTYLKLAKNTQDPRVAQR----------ATEAALQARQPA 101 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENAD 238 + W + + A + + + R L L+A + + D Sbjct: 102 FALEAAKIWTE---LDPESIP-----ARQMMAALLVHFDRLDEARPHLEKLLAVAGDKID 153 Query: 239 KGDMIASYHDAIESLKLC------------DNSIMA-------SICAAKSLISQNKKRKA 279 M + K + A + A + I+ + +KA Sbjct: 154 DAFMQLNSLLVRSPNKNAIFELVKQLAQPYPDLPEAHFAESQAAWFAERFDIALEEMKKA 213 Query: 280 EVILEKIWKVNPHPEIANIY--THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L W E+A IY L E+ ++ + ++ ++ + +++ L Sbjct: 214 LA-LRPEW------EMAAIYEGRILSRESNARAIEFFDDYLKRYPKANDTRITYARLLLA 266 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM-PDP 392 +A + + P + + N D + AL DP Sbjct: 267 ERDYSKAREQFQKLLTENPDNPDVAIAVGLLSLELQNYDVAESNFKRALELGYRDP 322 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 6/135 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-- 222 G A + + +L+ PD+P ++ LA E + Q + E Sbjct: 402 RESGAYKKAFQLLSSSLEKLPDSPE----LLYDRALAAEKIGKADIMEQDLRKLIELRPD 457 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A + + + + +++KL + Sbjct: 458 HAHAYNALGYGIAEHSSKRLPEALELIEKAIKLSPIDPYIIDSLGWVHYRMGDINQGLSY 517 Query: 283 LEKIWKVNPHPEIAN 297 L + + +NP PEIA Sbjct: 518 LRQAFAMNPDPEIAA 532 >gi|6831573|sp|Q64282|IFIT1_MOUSE RecName: Full=Interferon-induced protein with tetratricopeptide repeats 1; Short=IFIT-1; AltName: Full=Glucocorticoid-attenuated response gene 16 protein; Short=GARG-16; AltName: Full=Interferon-induced 56 kDa protein; Short=IFI-56K gi|1401060|gb|AAC52625.1| GARG-16 [Mus musculus] gi|9800619|gb|AAB33831.2| interferon-alpha regulated protein [Mus sp.] gi|74188226|dbj|BAE25784.1| unnamed protein product [Mus musculus] Length = 463 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + +L ++ A +E L + + + + R + Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A +AL SP + ++ + + + + L Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295 Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +R+ + + ++ AI E+LKL MA +C A+ ++ +AE +K Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + H+ + + R R + +K+S + + + L++ A Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405 Query: 347 KAMLAMKIAPRKEIF 361 K + A++ + + Sbjct: 406 KLLTALEKVAERRVC 420 >gi|116619248|ref|YP_821404.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222410|gb|ABJ81119.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 731 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 46/307 (14%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L+++A AR+ + V + V A + + LQ+ + Sbjct: 346 LIALAWGAAEFARRRPGAAPAIKVLAIAFCVACVLVTWAQI-GYWQDSRTLFAHALQVTS 404 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV---------------TEAVVQ 196 A ++L E G +A +AL I PD TEA+ Q Sbjct: 405 GNYLAHHNLGVELADEGRYEAAIAEYQEALRIRPDYAQARTDLGNALLKAGGHGTEALAQ 464 Query: 197 QYVL--------------------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A A+ E+ R L A + Sbjct: 465 YRAAVESMPGSPIPHNDLGNALVKAGRLQDAVAEYQAALAIKPEYAEARNNLGKALAGIP 524 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP---- 291 G+ + Y A+ ++ N A + +L + + A + ++NP Sbjct: 525 GRGGEAVGDYQAAL---RINPNLAEAHVNLGDALAQEPGRIADAMAEYQTALRINPNLAE 581 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 H + ++ + N + E+ + M +A A+ Sbjct: 582 AHHSLGRAFSD-MPGRMADAAAEYEAALRANPDFAEAHYDLGLALSSMDRPAEALAQFEA 640 Query: 351 AMKIAPR 357 A+K+ P Sbjct: 641 ALKMRPD 647 >gi|145588689|ref|YP_001155286.1| hypothetical protein Pnuc_0502 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047095|gb|ABP33722.1| Tetratricopeptide domain protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 403 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 87/270 (32%), Gaps = 22/270 (8%) Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102 + S L + + + SR+ L + R +K L L++ Sbjct: 4 IATSWLLLLPIMFGIGWLASRWDLRLENRMDERERMRQQRSTFKGLSL-LLNEQPDQAIE 62 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF----AVY 158 + + + + L L + + A + + + A Y Sbjct: 63 TLVKIAQLDPETIELHFSLGNLFRRR-----GETERAIRVHQHLANRDDLKLRDRDHAAY 117 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-ITFLNQKKKN 217 L + R G L+ A+ + D P E++++ Y + ++W +A I + Sbjct: 118 ELGRDFLRAGLLDRAEASLNRVGDGKYAVP-AKESLLEMYQVERDWKKAIIAATELESLQ 176 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 K + A + + D++ +L+ N A I ++ + Sbjct: 177 GKSHHTEIAQFHCELGQDALRRKDLVEVEQSIQRALQAVPNHARALILQGDYFMATERPA 236 Query: 278 KAEVILEKIWK--VNPHPEIANIYTHLLSE 305 +A + W + HP Y HLL++ Sbjct: 237 QA----IEAWSVIASLHP----AYMHLLAD 258 >gi|77748781|ref|NP_644665.2| polysaccharide deacetylase [Xanthomonas axonopodis pv. citri str. 306] Length = 900 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L K++ R RA L R L+ + + + E+LKL + +A+ Sbjct: 770 ATLVLPAAVKSSD---RQRAQLANERGLQLYKEKRYVDAAEQFAEALKLRPDFALAANNL 826 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGK 310 Q + ++ LE K++P +A + Y + + Sbjct: 827 GFVYYRQGRFAESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKAR 874 >gi|124004030|ref|ZP_01688877.1| TPR repeat [Microscilla marina ATCC 23134] gi|123990609|gb|EAY30089.1| TPR repeat [Microscilla marina ATCC 23134] Length = 603 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 8/131 (6%) Query: 130 ALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 AL ++ A L+ + + + G+L+ A +KA+ I+P+ Sbjct: 289 ALLNEKWQEAISAYTKCVHLKSDHYMAYGHRG--RANRKAGNLDQAIADFSKAIKINPEY 346 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W + V+AK+++ A+ ++ + A R+ G + Sbjct: 347 DWAYASRGYAKVVAKKYTEALLDFDKAIALKPSYRWAYAH----RARTKYYLGRYKNAIE 402 Query: 248 DAIESLKLCDN 258 D +LK+ N Sbjct: 403 DYNNALKIDPN 413 >gi|73667829|ref|YP_303844.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro] gi|72394991|gb|AAZ69264.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro] Length = 1013 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 25/216 (11%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMML 147 GL+ A K + H+ +++ + ++++ A LE + Sbjct: 605 KGLVFAHCGEWGKALK----AFDRILTHDPKNTQASVMKAFALIRLQEFDKAISVLEELT 660 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + L F R+ D A + KA+DI+P + + Y + A Sbjct: 661 TDEINSDLPSCLLGFACFRLEDFERALKAYRKAIDINPKNSHARNGLSELYFRLGDSRGA 720 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN-------SI 260 + L A E + +R + + ++ + +L L + Sbjct: 721 LKELEASIAEAPENSFSRNL----KGRVELEEQACEEALESFRRALALDSEDQRLLLWDV 776 Query: 261 MASICAAKSLISQNKKR------KAEVILEKI--WK 288 A A++ +N R A LEK W+ Sbjct: 777 YARYMYAEASFEENSARFRHMLLAAAGKLEKAAIWQ 812 >gi|56475450|ref|YP_157039.1| hypothetical protein ebA36 [Aromatoleum aromaticum EbN1] gi|56311493|emb|CAI06138.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 928 Score = 42.6 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 97/303 (32%), Gaps = 39/303 (12%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + + + A + + H + +L + LA A L + ++ + Sbjct: 588 LGSKDPKKALLIAQEAAAGHA-DQPQAISML-ARAQLAAGDQQQAVSSLNKLSELVSQSP 645 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---- 210 ++ + D A+R +AL+ PD + + K A+ Sbjct: 646 PSLAEVADMQRFAKDRAGAERSLRRALEHKPDMFEAQQRLASLLAEDKRTDEALKISATV 705 Query: 211 -----------LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 L + + +A N A+ ++LE A H A ++ Sbjct: 706 QKQRPKAAAGPLLEGQIHAASANWEPAVQAYRKALELEALAQTAAKLHAAQVLAGKAPDA 765 Query: 260 IMASI---------------CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL- 303 + A ++L + + +AE + K+ +++ P+ A + +L Sbjct: 766 AKTAADWLRTHPKDVVLRSYLAGRALAER-RLDEAEKLFHKVDELS--PDNAQVLNNLAW 822 Query: 304 ---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L A R ++ + L + + +E G D+ A+ ++P + Sbjct: 823 IAGQRKDPEALALAERALKLAPNNPAILDTLGTLQVERGQRDEGLENLRKAVGLSPGAGV 882 Query: 361 FLL 363 L Sbjct: 883 LRL 885 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 29/304 (9%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDL 170 + L + +A A L+ +L + + GDL Sbjct: 331 LARAPKQPLARRMLAMSLMASGDQGRALTTLQPLLDASSVDSATMGLAG--RIHVANGDL 388 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A Y K + P+ + +L + S A L + I+++ Sbjct: 389 DRAAEYFAKVAAVEPENAMARTRLGVSKLLGGDASEAFADLEAASDLESDTGHADVIMIL 448 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A G++ + + N+ + L+++ A + EK ++N Sbjct: 449 AY----LRSGELDKAMAAQRQLEAKQPNNPQTHVLKGGILLARKDAAGARLAFEKALELN 504 Query: 291 PHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA--- 344 P A + + KR ++ N ++VE+ ++++ + + Sbjct: 505 PDSVAAAANLARMDIGEKRPDDARKRFEKIVATNPKNVEAHLLLADLLARTEAKPAEVVS 564 Query: 345 ---HAKAMLAMKIAPRKEI------------FLLLAQIEQANSHNTDKILYWTQSALHAM 389 A +AP+ + LL+AQ A + + + A A Sbjct: 565 MLKRAAGANPAALAPKLALVRYYLGSKDPKKALLIAQEAAAGHADQPQAISMLARAQLAA 624 Query: 390 PDPL 393 D Sbjct: 625 GDQQ 628 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 87/300 (29%), Gaps = 41/300 (13%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-------------------- 168 A+ A E + A L G Sbjct: 143 AHFAKGDLEKARAAYEAAAVADPSSGSARAGLAQVKLSAGELDGALADADAAIAADPGAA 202 Query: 169 --------------DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 D+ A +A+ P A A+V + A+ L Sbjct: 203 DAHAVRADVLLMRKDIPGAAAALEEAIKARPKAVNYHFALVSMLLRENRVDEAMPHLEAM 262 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 KK+A + R + ++L + + + + E+++L + + A + A I N Sbjct: 263 KKSAPQHPSTRYL----QALVDLRNNRIEEARDNVTEAVRLAPDYLPARLLAGAIHIRLN 318 Query: 275 KKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 + A+ L + P +A + + S + L L + + ++ + Sbjct: 319 QHVLAQEHLGVVLARAPKQPLARRMLAMSLMASGDQGRALTTLQPLLDASSVDSATMGLA 378 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +I + G +D+A + P + + + + + ++A D Sbjct: 379 GRIHVANGDLDRAAEYFAKVAAVEPENAMARTRLGVSKLLGGDASEAFADLEAASDLESD 438 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 3/167 (1%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A P A K + T + ++ ALAER+ + A + + ++ Sbjct: 759 AGKAPDAAK--TAADWLRTHPKDVVLRSYLAGRALAERRLDEAEKLFHKVDELSPDNAQV 816 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +L + + + D A A +AL ++P+ P + + + V + + L + Sbjct: 817 LNNLAWIAGQRKDPE-ALALAERALKLAPNNPAILDTLGTLQVERGQRDEGLENLRKAVG 875 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + R L A + + ++ A+ Sbjct: 876 LSPGAGVLRLNLAKAYLKADRKDDARKELDNLLGQAPAGSPLHAEAT 922 >gi|331018124|gb|EGH98180.1| TPR domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 575 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 89/275 (32%), Gaps = 39/275 (14%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 +F + LV LL ++A +++IA + + + Y + +G S Sbjct: 45 YGSFSQDTLVSLLSAELAGQRNRFDIALDNYVTQAVKTQDPGVSERA-YQIAEYMGADQS 103 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---------- 222 A A +P A Q A + ++ ++ + + + + Sbjct: 104 ALETALIWARNAPSDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAAE 163 Query: 223 --------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 L+ ++L GD S +E + I Sbjct: 164 TDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAP 222 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALRL 317 + A+ L S N+ ++A +LEK K +P+ + Y +L E + L Sbjct: 223 ILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAAL 280 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + E ++ + LE + ++A + Sbjct: 281 VQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 315 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 K+ Q ++ L + L + L + + A LE ++ A + A +L Sbjct: 273 AKVQFAALVQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 331 Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 D SA YA + PD V + A L++ + ++ Sbjct: 332 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 389 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + + + ++LK + A +N + E Sbjct: 390 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 446 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338 L I K P +A + + A L E + L + + + Sbjct: 447 LRTIIKREPENAMALNALGYTLSDRTTRYTEARELIEKAHQISPDDPAVLDSLGWVNYRL 506 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G++D A A++ P E+ L ++ A + + AL PD Sbjct: 507 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 558 >gi|241666982|ref|YP_002985066.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862439|gb|ACS60104.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 354 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 54/190 (28%), Gaps = 9/190 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQI 149 G++ AA + A Y+ + + + + + A + Sbjct: 126 GVILKAAGDSTAAE--ARYLDAVRLWPQYPEAHYNLAILLEETDRPDEAAAHYRQALKCR 183 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P + + L + GD A+ + +AL + P E A + Sbjct: 184 PDYVDALLR-LAGVFDKWGDRFEARHHFQEALRLRPGFAEAHNNFGVFLEKHGEAEEAES 242 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 Q + +++ ++ + D+ A+ +L+ A A Sbjct: 243 QYRQALQVRSDYSE----AHYNYAM-LLEGRDVEAAELHYRAALRSAPEYAEAHNNLAVL 297 Query: 270 LISQNKKRKA 279 L + A Sbjct: 298 LHEKGALSDA 307 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 70/221 (31%), Gaps = 19/221 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 GD +A+ A+ + P P + A Q K ++ Sbjct: 130 KAAGDSTAAEARYLDAVRLWPQYPEAHYNLAILLEETDRPDEAAAHYRQALKCRPDY--- 186 Query: 225 RAILLIARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + R DK GD + H E+L+L A L + +AE Sbjct: 187 --VDALLRLAGVFDKWGDRFEARHHFQEALRLRPGFAEAHNNFGVFLEKHGEAEEAESQY 244 Query: 284 EKIWKV-----NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + +V H A + RA E E+ ++ + E Sbjct: 245 RQALQVRSDYSEAHYNYAML-LEGRDVEAAELHYRAA--LRSAPEYAEAHNNLAVLLHEK 301 Query: 339 GSIDQAHAKAMLAMKIAP-----RKEIFLLLAQIEQANSHN 374 G++ A + + A+++ P + + LLA + + + Sbjct: 302 GALSDAKSHYLSAIRLRPVDPQTYRNLSFLLAAMGEEEQAD 342 >gi|190348750|gb|EDK41270.2| hypothetical protein PGUG_05368 [Meyerozyma guilliermondii ATCC 6260] Length = 636 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 81/228 (35%), Gaps = 16/228 (7%) Query: 53 FAWILLFAVSRFFLSCPAMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSY 109 W+ + + P K + GY + G A + + M +Y Sbjct: 364 VTWLAIGTYYLSVNNLPEA-RKFFSKATLLDPNHGYAWI--GFGHTFAADGEHEQAMSAY 420 Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + +L +L +++A E L+ QI AT + L + Sbjct: 421 AFAARLYPGTHLPHLFLGMQHFLMNNFSLAQEYLQSSYQICATDPLLLNELGVVCFHRNN 480 Query: 170 LNSAQRYATKALDISPDA-----PWVT-EAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222 L+ AQ Y +AL + W++ + + +K+ +A+ Q + + Sbjct: 481 LSRAQAYFEEALAAAKHLNADSKAWISIHTNLGHTFRRSKQLEKALECFQQVLR---LSH 537 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 ++ A +L A L + G+ + SL + ++ +A+ ++L Sbjct: 538 KDDASILAAVGLVHLKLGNASMAVESLHNSLAISPSNPIANDLLKRAL 585 >gi|119509153|ref|ZP_01628304.1| TPR repeat protein [Nodularia spumigena CCY9414] gi|119466319|gb|EAW47205.1| TPR repeat protein [Nodularia spumigena CCY9414] Length = 226 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 11/200 (5%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMM 146 L G +++ ++ A+ + + + N L L E Q +A YN A + Sbjct: 12 LSLGFSAVSIPSVAQAQVLMAQTT------NPQLKRLFEEGQRLVAANDYNGAIAIYQQA 65 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 QI + + + G+ A +A+ I + AV V + Sbjct: 66 AQIEPRNARIHSGIGYLYAQQGNFPPALASYRRAIAIDANNSDFHYAVGYIKVNMGDTKG 125 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + + NRN + + A GD A+ +++KL N+ Sbjct: 126 AKESYRRAIQ----LNRNHLNAYLGLGITQARMGDFTAANWAYEQAIKLAPNNAQTYEFM 181 Query: 267 AKSLISQNKKRKAEVILEKI 286 A + + KA +L+K Sbjct: 182 ALMYKQRRQTAKANNLLKKA 201 >gi|330887867|gb|EGH20528.1| TPR domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 423 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 74 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 246 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|113476523|ref|YP_722584.1| hypothetical protein Tery_2947 [Trichodesmium erythraeum IMS101] gi|110167571|gb|ABG52111.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 321 Score = 42.6 bits (99), Expect = 0.17, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 23/130 (17%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G+L +A + +AL I P+ P + + Y K+W AI + + K + Sbjct: 50 QGNLEAAMSWYAQALKIQPNNPELYKITGNLYSRKKQWDEAIAYYEKAIKLEP------S 103 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + L + K + A+ + + S + ILE Sbjct: 104 LTEVYEKLGHIFKQRYQENLQAALNNYRQA------------IEYSPGDESNYYKILE-- 149 Query: 287 WKVNP-HPEI 295 + P HPEI Sbjct: 150 --IQPYHPEI 157 >gi|172035397|ref|YP_001801898.1| hypothetical protein cce_0481 [Cyanothece sp. ATCC 51142] gi|171696851|gb|ACB49832.1| unknown [Cyanothece sp. ATCC 51142] Length = 252 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 13/178 (7%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + A+ NQ R + G + D + LKL Sbjct: 73 KSRQGNYEAAVDDFNQVLAQNP----QDINAYFNRGFAYSSLGQFEQALADFTKVLKLDP 128 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRA 314 + A + + + KA EK K+NP+ A HL S + Sbjct: 129 QMVQAYVNRGNVYLQLGEDEKAISDYEKALKINPNDAFAQNNLGLAHLNSGSPELAKIDF 188 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-----APRKEIFLLLAQI 367 + I+ E+ L++G +A A A +I L A+I Sbjct: 189 TQAVTIDPLYGEAYYNRGLALLDLGETKKAIADFQKAAEIWEEMGEQTASEAAL-AEI 245 >gi|170734144|ref|YP_001766091.1| TPR repeat-containing protein [Burkholderia cenocepacia MC0-3] gi|169817386|gb|ACA91969.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia cenocepacia MC0-3] Length = 607 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 85/223 (38%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + D A +A++ V + + L KN + NR A L IAR Sbjct: 169 ARELARASGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D D + ++L+L + + A++ L +A I V + Sbjct: 224 QQLAVDDKD--GAAQSLKQALQLRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D+A Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDEATGY 337 Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LAQI +++ + W Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 10/154 (6%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A +L D +++ + + +S AS A L+ K Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161 Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A+ +L + P +A + + VG L + + + E+ + Sbjct: 162 ADAQPMLARELARASGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLA 220 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +++ L + D A A+++ P L+ Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQLRPDYLPAALM 254 >gi|120610109|ref|YP_969787.1| type IV pilus biogenesis/stability protein PilW [Acidovorax citrulli AAC00-1] gi|120588573|gb|ABM32013.1| type IV pilus biogenesis/stability protein PilW [Acidovorax citrulli AAC00-1] Length = 280 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 4/124 (3%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L F R+GD SA +ALDI+P P++ K ++ A F ++ Sbjct: 101 LRGLVF--MRLGDWPSADDSFRRALDINPQEPYLLHNYGWLRCQQKNYAEAGRFFDRAL- 157 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A RA L+ + L G + + ++ +L + + A + Sbjct: 158 -AVPSYTARAKTLMTQGLCQERAGQVAEAEKTLAKAYELDAGNPVVGYNLASLAFRRGDA 216 Query: 277 RKAE 280 ++A+ Sbjct: 217 KRAQ 220 >gi|110833213|ref|YP_692072.1| hypothetical protein ABO_0352 [Alcanivorax borkumensis SK2] gi|110646324|emb|CAL15800.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 153 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 8/120 (6%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + Q + L L + A + + A LE L I + L GD Sbjct: 34 SASQELEGSPALSLLASAEQARQQGNSSRAERYLERALNIAPDSSWLYKELADLRLTEGD 93 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A+ +A KAL ++P+ P + + A++ Q + R RA +L Sbjct: 94 ARGAEGFALKALRLAPEHPEYQAGLWELVATARD--------RQGDAGGAKAARERAAVL 145 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ + G+ + A+RY +AL+I+PD+ W+ + + + + A F + + A E Sbjct: 53 QARQQGNSSRAERYLERALNIAPDSSWLYKELADLRLTEGDARGAEGFALKALRLAPEHP 112 Query: 223 RNRAIL--LIARSLENA-DKGDMIASYHDA 249 +A L L+A + + D G A+ A Sbjct: 113 EYQAGLWELVATARDRQGDAGGAKAARERA 142 >gi|15805161|ref|NP_293847.1| hypothetical protein DR_0121 [Deinococcus radiodurans R1] gi|6457788|gb|AAF09713.1|AE001874_10 hypothetical protein DR_0121 [Deinococcus radiodurans R1] Length = 449 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 56/199 (28%), Gaps = 27/199 (13%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW---NRNRAILL 229 A A A+ +P+ P V Q Y W +A + A N RA Sbjct: 136 AADRAEAAVSAAPNNPDVLRLRAQIYTEVGFWKQAESSWRAYFAVAPVAAGQNEARAAGN 195 Query: 230 IARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + +L A +G + L L S+ + AA++ + A+ + + Sbjct: 196 VQYNLGYAAYTRGQSAQAAAYFKACLTLDPQSVPCATWAARTALESGDYALAQNLYTQAL 255 Query: 288 KVNPH----------------------PEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + P + Y L + L Sbjct: 256 SLAPTDKTLNYFAQVARNASTYGPAATQAFSRAYASLDAGRRAEALAGFQEAARSAPNFP 315 Query: 326 ESLVIVSKIALEMGSIDQA 344 E+ ++ALE G A Sbjct: 316 EAQREAGRLALEAGDTGAA 334 >gi|16079316|ref|NP_390140.1| hypothetical protein BSU22590 [Bacillus subtilis subsp. subtilis str. 168] gi|1730922|sp|P54389|YPIA_BACSU RecName: Full=TPR repeat-containing protein ypiA gi|1146224|gb|AAB38432.1| putative [Bacillus subtilis subsp. subtilis str. 168] gi|2634677|emb|CAB14175.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168] Length = 423 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 87/248 (35%), Gaps = 16/248 (6%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC-RIGD 169 + NE ++ ++ A+ Y A + + + V+ ES G+ Sbjct: 127 AKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESLSASGE 186 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A + KA+D +PD + A + + + ++ + KE + + L Sbjct: 187 FEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPSYTSLY 241 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + S +G + A E ++ + + + AAK + K + + +L++ + Sbjct: 242 MPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALAL 301 Query: 290 NP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +P H +A + E+ + + +E + ++ E+ ++ Sbjct: 302 DPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEE 358 Query: 344 AHAKAMLA 351 A A Sbjct: 359 AKQSFEAA 366 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 5/127 (3%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LI +++ + G+ + ++ K + A AA+ KA ++ + Sbjct: 3 TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLYYEWGDVEKAISLISDLH 60 Query: 288 KVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ E+ N Y LL + L + E + ESL++++ + G + + Sbjct: 61 DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS 120 Query: 345 HAKAMLA 351 K A Sbjct: 121 EQKLFQA 127 >gi|326798562|ref|YP_004316381.1| Tetratricopeptide TPR_2 repeat-containing protein [Sphingobacterium sp. 21] gi|326549326|gb|ADZ77711.1| Tetratricopeptide TPR_2 repeat-containing protein [Sphingobacterium sp. 21] Length = 570 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 18/162 (11%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++A L +L++ + + A + L +L A +A KA + PD W Sbjct: 46 GDIDLAQTTLHKLLKLDDSNDAAYFELARLELEDKNLGDAAIHAKKATTLKPDNEWYWVL 105 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIARSLENADKGDMIASYHD 248 + Y ++++ +Q + E ++R A+ L N + + +YH+ Sbjct: 106 LADIYKRMEDFNSLPPIFDQLIRIKPEKKEYFYDRAYALFL------NNELDKSLQAYHE 159 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKI 286 + DN I I + + Q + +KA I+EK Sbjct: 160 IEQKFGKDDNII---IARQEIYLKQKQPKKAIEEVTSIIEKE 198 >gi|256000745|ref|NP_001157675.1| plectin isoform 1hij [Mus musculus] gi|256000747|ref|NP_958789.3| plectin isoform 1hij [Mus musculus] gi|256355107|ref|NP_958794.2| plectin isoform 1hij [Mus musculus] gi|256367522|ref|NP_958790.2| plectin isoform 1hij [Mus musculus] Length = 4386 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 9/161 (5%) Query: 101 PLARKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAV 157 +AR+ + V Q E L +L + A + + M R + Sbjct: 1240 EVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRL 1299 Query: 158 YSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFL 211 E R G+L + + A +A A E + VQ K + A L Sbjct: 1300 QLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAL 1359 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 K + + RA+ + A++ + +A + Sbjct: 1360 RVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERA 1400 >gi|196233160|ref|ZP_03132007.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196222804|gb|EDY17327.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 566 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 11/203 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + GDL +A+ + L + + + A L Q A Sbjct: 12 LAVQYHGSGDLAAAEAICRQILAAASGHAEAWHLLGVCLLSTGRHEEARECLAQAAALAP 71 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R + + G + +L++ A + +L+ + +A Sbjct: 72 SVACMR----CDLGVVHRFLGQHEEAVRCFERALQIDPEYAPAWTNLSDTLLRVGRLDEA 127 Query: 280 EVILEKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKI 334 ++ V P++A +++L + + LR IN + + + ++ Sbjct: 128 ISSGQRA--VAAQPDLAEAHSNLGNALRDKGRLDEAIHHFLRALAINPQFIAAYNNLAHA 185 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 +E +D A A A+ P Sbjct: 186 YIEADRLDDAIASCDRALGRQPT 208 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 68/225 (30%), Gaps = 28/225 (12%) Query: 86 KALYTGLMSIAAHNIPLARKMHSY--VSQQHTFHNEYLVYLLEVQIALAE---------- 133 +A+ +++ A+ + + + +H E L Q A Sbjct: 26 EAICRQILAAASGHAEAWHLLGVCLLSTGRHEEARECL-----AQAAALAPSVACMRCDL 80 Query: 134 -------RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q+ A E LQI A +L R+G L+ A +A+ PD Sbjct: 81 GVVHRFLGQHEEAVRCFERALQIDPEYAPAWTNLSDTLLRVGRLDEAISSGQRAVAAQPD 140 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + AI + ++ A +A + AD+ D + Sbjct: 141 LAEAHSNLGNALRDKGRLDEAIHHFLRALAINPQF--IAAYNNLAHAYIEADRLDDAIAS 198 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D +L A + + + +++ +AE + P Sbjct: 199 CD--RALGRQPTFAKAWLNRGTAYMGKDEVGEAEQSFRRALACQP 241 >gi|134277901|ref|ZP_01764616.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] gi|134251551|gb|EBA51630.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] Length = 614 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|154341523|ref|XP_001566713.1| CDC16 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064038|emb|CAM40229.1| putative CDC16 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 546 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 63/191 (32%), Gaps = 22/191 (11%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 LA++M + V+LL V+ A + ++ +++ A+ + Sbjct: 59 KLAKQMT------FAYDQNSEVFLLAVKAAFELGDLKTCVQHAMTLINADSSKVVAMCFV 112 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + GD A + AL+ P A+ ++++L W I L + E Sbjct: 113 AKAAELSGDPAKAVHFYKMALEADPFCGEAFSALTERHLLD-HWE--ILELIDSLRIPPE 169 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R+ L + G + + AK +N R+A Sbjct: 170 IEVYRSSLKARIGCDYITSGISGVPRTLVLLA-------------GAKKEYERNNLRQAL 216 Query: 281 VILEKIWKVNP 291 + +I ++ P Sbjct: 217 SLTTEILEMEP 227 >gi|159045614|ref|YP_001534408.1| TPR domain-containing protein [Dinoroseobacter shibae DFL 12] gi|157913374|gb|ABV94807.1| TPR domain protein [Dinoroseobacter shibae DFL 12] Length = 584 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 102/340 (30%), Gaps = 80/340 (23%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN------------------ 171 AL + A + M+ P TR F +Y ++GD Sbjct: 159 ALDRGRPAEALAAFDEMIDDPRTRAFGIYHKAMALAQVGDFEGADALFLEDGSIAASLSG 218 Query: 172 ----------SAQRYATKALDI------------------------------SPDAPWVT 191 + A +A + P A + Sbjct: 219 RAIIAHAQVLAQLDRADEARTLIETRIGADDPRGAAILDALDAGTLVFDVVPDPAAGYAE 278 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 L + + A T L + A+LL A LE+ ++ D + + Sbjct: 279 TFFTVAIALNGQAADAFTLLYARLAQILAPEHIDALLLTASLLEDLEQFD--LANQVYDK 336 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 + + A I A L K A +L + V H ++A ++ L +T ++ Sbjct: 337 VPRDSPAFLTAEIGRANVLREAGKADAAIEVLTQ--LVETHGDVARVHAALA--DTHRRM 392 Query: 312 KRALRLEEI-----------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 + E ++ +G D+A A+++ P + + Sbjct: 393 ENFAEAAEAYDAAIAIAEAQGQDDWVLYYARGIAHERIGDWDEAEVDLRRALELNPGQPM 452 Query: 361 ---FLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISD 397 +L + +E + + + + A+ A PD +I+D Sbjct: 453 VLNYLGYSFVEMGENMDEALAM--IEEAVAARPDNGYITD 490 >gi|78045823|ref|YP_361998.1| hypothetical protein XCV0267 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034253|emb|CAJ21898.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 837 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L + G +A + KA+DI P V+ + ++ +A L ++ Sbjct: 418 YALGQQRYSEGKYGAALDFFQKAVDIDPHFALAWLGQVRAHFANVDYKKATETLRVAEQF 477 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A+ + + ++ D + I+ +L + A AA L N+ Sbjct: 478 KSRLPPREALYVKSWGVQIL---DPAQAADFWIQMAELYPDYAPAQANAAMDLFVANRFA 534 Query: 278 KA 279 A Sbjct: 535 DA 536 >gi|56752875|gb|AAW24649.1| SJCHGC09396 protein [Schistosoma japonicum] Length = 472 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 49/221 (22%) Query: 160 LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L R GD+ +A+ +A + +P++ + A V+ KE++RA L++ + Sbjct: 131 LMAAKTRWLAGDVPAARSILARAFEANPNSEEIWLAAVKLESENKEYARARRLLDKACAS 190 Query: 218 AKEWNRNRAILLIA-------RSLENADKGDM---------------------------- 242 A + ++L+ +K Sbjct: 191 ASTARVWMKAARLEWCLGELDKALQMLEKATSMYHQAPKLWLMLSQIYEQMSVGEGLKLN 250 Query: 243 ------IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI 295 + + + L + + A+ KA ILEK NP PE+ Sbjct: 251 EVESLKERARNTYRDGLNHNPHYTALWLQLARFEERHGNLTKARSILEKARSQNPKTPEL 310 Query: 296 ANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIVSKI 334 + + +LK L + +E S + ++ Sbjct: 311 ---WLEAIKLEVRAQLKPVADSLLSKALQECPTSGCLWAEA 348 >gi|315127012|ref|YP_004069015.1| TPR motif protein [Pseudoalteromonas sp. SM9913] gi|315015526|gb|ADT68864.1| TPR motif protein [Pseudoalteromonas sp. SM9913] Length = 552 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 70/173 (40%), Gaps = 16/173 (9%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + +A ++ +A L+ ML+ TR A+ L ++ AQ + ++A I+P Sbjct: 216 EALIANNEHILAQRMLKTMLERNETRLVALDLLGRLEIKLNQFELAQEFLSQAAHIAPRN 275 Query: 188 PWVTEAVVQQYVLAKEWS------RAITFLNQKKKNAKE---WNRNRAILLIARSLENAD 238 +++ ++ +++ + I + + N RA + A + + D Sbjct: 276 IDRQKSLNSVSLINRDYETSYLTQKDIATFAKYSMHDSPDIYLNAARAGIDFALTTDQTD 335 Query: 239 KGDMIASYHDAIESLKLCDNSIMAS------ICAAKSLISQNKKRKAEVILEK 285 + + I S +L ++ + A+ +++ +KA+ ++E+ Sbjct: 336 QINRI-SRQTNKYINELKTQFPTSNAQTQIDVLNARLYYLKDEHKKAKQLIEQ 387 >gi|308501583|ref|XP_003112976.1| CRE-OGT-1 protein [Caenorhabditis remanei] gi|308265277|gb|EFP09230.1| CRE-OGT-1 protein [Caenorhabditis remanei] Length = 1255 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 4/138 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A L+I A +L + G L A + +A+ ISP Sbjct: 530 QGKIEDATRLYLKALEIYPEFAAAHSNLASILQQQGKLQDAILHYKEAIRISPTFADAYS 589 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + S AI N+ + + A + + D G+M + + Sbjct: 590 NMGNTLKEMGDSSAAIACYNRAIQINPAF----ADAHSNLASIHKDAGNMAEAIQSYSTA 645 Query: 253 LKLCDNSIMASICAAKSL 270 LKL A A L Sbjct: 646 LKLKPEFPDAFCNLAHCL 663 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 16/157 (10%), Positives = 45/157 (28%), Gaps = 11/157 (7%) Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + P + + A + + E+ A + +G Sbjct: 510 FQLCPTHADSQNNLANIKREQGKIEDATRLYLKALEIYPEF----AAAHSNLASILQQQG 565 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEI 295 + + E++++ A +L A + ++NP H + Sbjct: 566 KLQDAILHYKEAIRISPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAHSNL 625 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A+I+ N ++ ++ E ++ ++ Sbjct: 626 ASIHKDA--GNMAEAIQSYSTALKLKPEFPDAFCNLA 660 >gi|239993161|ref|ZP_04713685.1| TPR domain protein [Alteromonas macleodii ATCC 27126] Length = 385 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 19/189 (10%) Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL----- 270 +NA N+ A+ + + +Y + K+ + + + Sbjct: 190 RNAVSKNKVIAMYYNNKGADALVANSYTRAYSYFRAAAKVAPDLQQSWVNLGVLYRMVDE 249 Query: 271 ISQNKK--RKAEVILE---KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 Q++ + A + E W+ ++ +YT+ ++ LK +E K + Sbjct: 250 YEQSEMTYKHALSLNEENLTAWEN-----LSILYTYQDRDDEA--LKITQMVEAKRKHNP 302 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQS 384 I+ + ALE G I A +++ + I +A+ + + + + Sbjct: 303 YYHYILGEQALEAGDIALAIVHYERGLRLDNARHEILFGMAK-AYHELGDVSEAQRYLER 361 Query: 385 ALHAMPDPL 393 A+ P+ Sbjct: 362 AVRYSPNEQ 370 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A K+ V + HN Y Y+L Q +A E L++ R ++ + Sbjct: 287 ALKITQMVEAKR-KHNPYYHYILGEQALE-AGDIALAIVHYERGLRLDNARHEILFGMAK 344 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVT 191 +GD++ AQRY +A+ SP+ Sbjct: 345 AYHELGDVSEAQRYLERAVRYSPNEQEKQ 373 >gi|194042608|ref|XP_001926697.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Sus scrofa] Length = 858 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 154 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDVKNAELALFELSRVITLEPDR 213 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 214 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 266 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 267 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 325 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 326 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQLEPYNE 383 Query: 360 IFLLL 364 + + Sbjct: 384 VCQYM 388 >gi|167720693|ref|ZP_02403929.1| TPR domain protein [Burkholderia pseudomallei DM98] Length = 366 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|164660640|ref|XP_001731443.1| hypothetical protein MGL_1626 [Malassezia globosa CBS 7966] gi|159105343|gb|EDP44229.1| hypothetical protein MGL_1626 [Malassezia globosa CBS 7966] Length = 813 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 29/263 (11%) Query: 103 ARKMHSYVSQQHTFHNEY--LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A + +++ H H+ L +LE + A+ E A + + Sbjct: 515 ANPYMANMTRNHAAHSPPGMLDTVLEHEAAVQE-DPKDASKWYN----------LGLR-- 561 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 E+ R +A +AL I P A+ Y + A+ L++ K + Sbjct: 562 QQENERETQAIAALH---EALKIDPAMKEAWLALAVSYTNENDRDEALEALDRWIKVNDK 618 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLISQNKK 276 + AR + D+ +A+ A+ + D S + + + Sbjct: 619 YQAVVQSYQQARGRQGQDRHRQLANMLLAMARSRAQDISEPVDADVQVAMGVLFNASGEY 678 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIV 331 KA V P+ +Y + S + L+ + + + + Sbjct: 679 SKAVDCFTTALHVR--PDDWILYNRIGATLSNSGRSEESLQYYQQALTLRPDFARCHFNL 736 Query: 332 SKIALEMGSIDQAHAKAMLAMKI 354 S L + +A A A+ + Sbjct: 737 SISCLNLKMYTEAAEHAYTALTL 759 >gi|126442191|ref|YP_001059924.1| TPR repeat-containing protein [Burkholderia pseudomallei 668] gi|126221684|gb|ABN85190.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668] Length = 614 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--GQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|254786617|ref|YP_003074046.1| type IV pilus biogenesis/stability protein PilW [Teredinibacter turnerae T7901] gi|237684809|gb|ACR12073.1| type IV pilus biogenesis/stability protein PilW [Teredinibacter turnerae T7901] Length = 270 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 4/157 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L + A L++ L G+ A + KAL D Sbjct: 60 SYLQQNNREGAQRSFTKALEMDPKSAEGYLGLAMIHQLNGEAEEADKKFNKALRSRVDFS 119 Query: 189 WVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + V K + A T+ + R A++ + R G+ + Sbjct: 120 LASIQFSYARFLVEQKRYEEAYTYFEAASSDFNYPRRTDALVNVGRMALLL--GNKERAE 177 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L L A++ A + KA L Sbjct: 178 GAFAHALNLDPRQAEAALELADMAFASRDYTKAARFL 214 >gi|271962297|ref|YP_003336493.1| hypothetical protein Sros_0731 [Streptosporangium roseum DSM 43021] gi|270505472|gb|ACZ83750.1| hypothetical protein Sros_0731 [Streptosporangium roseum DSM 43021] Length = 567 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 114/338 (33%), Gaps = 40/338 (11%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-----EYLVYLLEV--QIALAERQYNI 138 +L G AA +A + + V+ + L L + A A Y+ Sbjct: 150 DSLARGFYHHAA---RVASRGRAAVTPDGDLRHWWAFTTGLATALAALDRAAEALDLYHE 206 Query: 139 AHEKLEM----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + M AT L S D A+ + +A+ ++ + V Sbjct: 207 ARAATDDPKITMSAAYATAMLYARHL---SAADQDPAQARHWLEQAIHLAAGLNDPRQRV 263 Query: 195 VQ----------QYVLAKEWSRAITFLNQKKKNAK------EWNRNRAILLIARSLENAD 238 + A E +RA+ ++ E ++ A L R+ + Sbjct: 264 LSTVFYEQGLALLDSRAGEPARALRLIDDGLARLAAVLTPGERPQDLARLRHNRAQVHLA 323 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297 GD + D + + + A + + + A ++ PH PE Sbjct: 324 LGDPAQALADLDTVIAHDPGNCEYYVDRAALHRAAGRSQAAIKDYGTAIRLGPHLPE--A 381 Query: 298 IYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 Y + + G+L RA R I+ +++ + + + +E G++D A A A + Sbjct: 382 YYNRAVLQQERGRLDRACDDLERALAIDPGHLDARIALVNLQVERGALDAAEAGARAGLA 441 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +AP++ L + ++ + + AL P+ Sbjct: 442 LAPQEPALLCTLGLIRSERGSLAEADELLSRALAGDPE 479 >gi|254445027|ref|ZP_05058503.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198259335|gb|EDY83643.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 362 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 14/111 (12%) Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT--------HLLSENTVG 309 + + + L++Q ++R LE ++ HP+ ++ + +E+ G Sbjct: 202 DYLPVYLMKGDLLLAQGEQRDGVRFLED--LLDEHPDSGDVKAVLVHGYQLYAYTESDAG 259 Query: 310 KLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +L RA EI+ ++ ES+V ++ E G ++A A ++ P Sbjct: 260 RLTRAIRSMRSSLEIDPDNAESMVGLASFLNEDGEYEEAEAVFEETIQKRP 310 >gi|168700800|ref|ZP_02733077.1| probable serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246] Length = 957 Score = 42.2 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 24/215 (11%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R GD +A P WV ++ + LA A+ +L + + Sbjct: 595 RGGDPVPFLTRVRRA---HPGDFWVNHSLGRMLDLAGRCEDALRYLQVAQALRPDA---- 647 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A++ + + G + +++L + AA +L ++ +A + E Sbjct: 648 AVVYHNLGITLSRCGRPGEALEQYRTAVRLDPACFPSYYNAAIALSAKGDHHEAVAMAEI 707 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE------INKESVESLVIVSKIALEMG 339 + P+IA I ++ ++A L + ++ + + + G Sbjct: 708 GLRFA--PDIA-ILRSAYGDSLQAIGRKAEALAQYQRAVELDPRLPGTQRSLRALLFASG 764 Query: 340 SIDQAHAKAMLAMKIAP--------RKEIFLLLAQ 366 A A+ P E+ LLL Sbjct: 765 RTADARVAWGKAIAADPLTHDEWDGYAELCLLLGD 799 >gi|312373537|gb|EFR21253.1| hypothetical protein AND_17299 [Anopheles darlingi] Length = 863 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 63/164 (38%), Gaps = 19/164 (11%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+ + E LE +LQ P + + GD+ +A+ + A Sbjct: 538 RAAYFEKNH-GTRESLEALLQKAVAHCPQSEVLWLMG-AKSKWLAGDVPAARGILSLAFQ 595 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +P++ + A V+ E+ RA L + + +A + +L + ++ Sbjct: 596 ANPNSEDIWLAAVKLESENAEYERARRLLAKARASAPTPRVMMKSAKLEWALNDLEE--- 652 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +++++ + AK + + + + + +LE+ Sbjct: 653 --ALSLLEDAVRVFPDY-------AKLWMMKGQIEEQKNLLERA 687 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 21/210 (10%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 I D+ A+ + +P P A + + + A + + + + Sbjct: 258 INDIKKARMLLKSVRETNPYHPPAWIASARLEEVTGKLQMARNLIMRGCEQNPQSEDLW- 316 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LE A + ++ + S+ I AA KR + K Sbjct: 317 -------LEAARLQPPDTAKGVIAQAARRIPTSVRIWIKAADLETEPKAKR---RVFRKA 366 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ + + + E+ L RA E SVE + ++++ + + A Sbjct: 367 LEHIPNSVRLWKVAVEMENPEDAKILLSRA---VECCGTSVELWLALARL----ETYENA 419 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A + P I+ A++E+AN + Sbjct: 420 RKVLNKAREKIPTDRQIWTTAAKLEEANGN 449 >gi|262091698|gb|ACY25288.1| hypothetical protein [uncultured actinobacterium] Length = 255 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 10/186 (5%) Query: 180 ALDISPDAPWVTEA--VVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLEN 236 A P V +A ++ A + + +K + + R +A +L+ Sbjct: 17 ARRSKPRVEEVYDAPERDEKRASAAALAHIEATVGKKINSVVGDVAAKRLTAKLALALDA 76 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----P 291 ++ + I + C + A SL + R A LE+ V+ Sbjct: 77 FERERWQDAKRIIIPVSRDCPGIKLIHEIAGLSLYRLGQWRDAADHLEQARAVSGGEVLN 136 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKAML 350 HP +A+ Y L+ V +L R L+ + E E ++ + + G + QA + M Sbjct: 137 HPVLADCYRALMRYEKVDELWRELKEASPDPEIIAEGRIVAAGALADKGDV-QAAVRLMQ 195 Query: 351 AMKIAP 356 K P Sbjct: 196 LAKQDP 201 >gi|256828561|ref|YP_003157289.1| TPR repeat-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577737|gb|ACU88873.1| TPR repeat-containing protein [Desulfomicrobium baculatum DSM 4028] Length = 453 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 14/205 (6%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 +KG K L G LA + + ++++ L + A E Sbjct: 159 EKGKKLLEAG----GWGEALLA-----AEDILQQKPDSAVGFMIKGDAYLGLGMTSRAEE 209 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + ++ + L + GD + +ISP + + + Sbjct: 210 MYQRAVKGAELYLAPLKRLAVLYEQAGDAGKQLECLRRLNEISPLNTQRILHIGELEIAR 269 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A + A+ L +R + D + H + ++L L ++I Sbjct: 270 GNTAVAEEMFQNVMRLAQREADEFLSNLSSRIADICASRDPDMAIHYSKKALDLRGDNIT 329 Query: 262 ASICA-----AKSLISQNKKRKAEV 281 A+ A SL Q K R+A Sbjct: 330 AADMATVNILGISLRKQGKWREAIA 354 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 14/139 (10%) Query: 134 RQYNIAHEKLE---MMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +A E + + Q A + + S + C D + A Y+ KALD+ D Sbjct: 270 GNTAVAEEMFQNVMRLAQREADEFLSNLSSRIADICASRDPDMAIHYSKKALDLRGDNIT 329 Query: 190 VTE-AVVQQYV----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + A V +W AI + A LL ++ ++ G+ Sbjct: 330 AADMATVNILGISLRKQGKWREAIAEYLRVLAVVPGS----ASLLYNMAMAYSEGGETKK 385 Query: 245 SYHDAIESLKLCDNSIMAS 263 + + ++LK+ AS Sbjct: 386 ALNALQKALKIDPEL-PAS 403 >gi|150004556|ref|YP_001299300.1| hypothetical protein BVU_2011 [Bacteroides vulgatus ATCC 8482] gi|149932980|gb|ABR39678.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 273 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 LNQK +++ +++NR L AR+ + + D E+ KL Sbjct: 167 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 226 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295 + + + +SQ KKR+A V EK ++ P PE+ Sbjct: 227 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 265 >gi|114763643|ref|ZP_01443037.1| hypothetical protein 1100011001335_R2601_16090 [Pelagibaca bermudensis HTCC2601] gi|114543644|gb|EAU46657.1| hypothetical protein R2601_16090 [Roseovarius sp. HTCC2601] Length = 278 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 12/103 (11%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK----KNAKE 220 R GD ++A ++A+ +P + + Q + +W RAI L K Sbjct: 7 LRDGDPDAALAALSEAVRDAPQEARLRVFLFQLLCVQGDWPRAIQQLRTAATLDPKAGTM 66 Query: 221 WNRNRAILLIARSLENADKGD--------MIASYHDAIESLKL 255 RA ++ R E G IE+LKL Sbjct: 67 AQMYRAAIICERQREEVFAGQRAPMVLGEPDDWIAALIEALKL 109 >gi|77460971|ref|YP_350478.1| hypothetical protein Pfl01_4750 [Pseudomonas fluorescens Pf0-1] gi|77384974|gb|ABA76487.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 574 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 9/159 (5%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ ++L GD + +E D I + A+ L N+ +A +L+K Sbjct: 188 LIFGKALLMQQDGDTQGALTL-LEDNPPEDGEIAPILLRARLLQGLNRGDEALPLLQKSI 246 Query: 288 KVNPHPE---IANIYTH-LLSENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSID 342 K +P+ + Y L+ ++ + K L + E E ++ + LE + D Sbjct: 247 KK--YPDDKRLRLTYARMLVEQDRMDDAKVEFSTLVQQYPEDDELRYSLALVCLEAKAWD 304 Query: 343 QAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILY 380 +A + + L L +I + + ++ Sbjct: 305 EAKGYLEDLIARESHVDSAHLNLGRIAEERNDPQGALIE 343 >gi|322784805|gb|EFZ11601.1| hypothetical protein SINV_02609 [Solenopsis invicta] Length = 566 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 74/212 (34%), Gaps = 25/212 (11%) Query: 167 IGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 I D+ A+ + +P+ P W+ A +++ + + A + + + Sbjct: 277 INDIKKARLLLKSVRETNPNHPPAWIASARLEE--VTGKVQAARNLIMKGCEVNPTSEDL 334 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LE A + +S++ S+ I AA KR + Sbjct: 335 W--------LEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETEVKAKR---RVYR 383 Query: 285 KIWKVNPHP-EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K + P+ + L E+ L RA E SV+ + ++++ + D Sbjct: 384 KALEHIPNSVRLWKAAVELEEPEDARILLSRA---VECCPTSVDLWLALARL----ETYD 436 Query: 343 QAHAKAMLAMKIAPRKE-IFLLLAQIEQANSH 373 A A + P I+ A++E+AN + Sbjct: 437 NARKVLNKARENIPTDRQIWTTAAKLEEANGN 468 >gi|213514694|ref|NP_001133428.1| DnaJ homolog subfamily C member 7 [Salmo salar] gi|209153968|gb|ACI33216.1| DnaJ homolog subfamily C member 7 [Salmo salar] Length = 498 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ AT V L Y+E C ++ A ++ Sbjct: 178 KVLKAECLAMLGRYPEAQSVASDILRMDATNGDALYVRGLCLYYEDC----IDKAVQFFV 233 Query: 179 KALDISPDAPWVTEAVVQQYVLA------------KEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A L + A ++ + A Sbjct: 234 QALRMAPDHEKARLACRNAKALKAKKEDGNKAFKDGNYDAAYELYSEALTIDPNNIKTNA 293 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R + + + D +++KL + I A + A+ + + + +A EK+ Sbjct: 294 KLFCNRGTVGSKLKKIDQAIEDCTKAVKLDETYIKAYLRRAQCYMDKEEYDEAVRDYEKV 353 Query: 287 WKVN 290 ++ Sbjct: 354 YQTE 357 >gi|134300945|ref|YP_001114441.1| heat shock protein DnaJ domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053645|gb|ABO51616.1| heat shock protein DnaJ domain protein [Desulfotomaculum reducens MI-1] Length = 402 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 14/139 (10%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--- 257 ++W +A Q + A E A + + + +GD + +++L Sbjct: 96 EEKWDKAEELFRQALQIAPE----DAQVHLGLAYTTFWQGDERTFEEEFQRAVELAPVAE 151 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-----ANIYTHLLSENTVGKL 311 + +M A L+ + +A +L+ + + P H ++ +Y L E+ + + Sbjct: 152 DKVMLFTIKAGLLLDDERPEEALQVLQTVEQQYPQHRQLFHQLSVRVYIELGREDELWAM 211 Query: 312 KRALRLEEINKESVESLVI 330 RA+ L E+ E + + Sbjct: 212 TRAM-LPAPGAENPEDIYL 229 >gi|116626162|ref|YP_828318.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116229324|gb|ABJ88033.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 577 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 9/138 (6%) Query: 127 VQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 + ++++A + + L+ P+ + L ++ DL A +A+ Sbjct: 432 AFAYQEQGRFDLAVAEFQKTADLEPPSADLLIDWGLAYDGMNQPDL--ALAKFREAVAKE 489 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P A V Y +W A + +K + AI + + + ++ A Sbjct: 490 PSAH-AYTQVGYIYAKRSQWKEANEAFDMAQKIDPGF----AITYLYKGQVHLANNELPA 544 Query: 245 SYHDAIESLKLCDNSIMA 262 + + +L+L A Sbjct: 545 ALAEFQHALQLDPRLEPA 562 >gi|260599823|ref|YP_003212394.1| cellulose synthase subunit BcsC [Cronobacter turicensis z3032] gi|260219000|emb|CBA34355.1| Cellulose synthase operon protein C [Cronobacter turicensis z3032] Length = 1167 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 47/169 (27%), Gaps = 16/169 (9%) Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + L A A + + +L+ E A L Sbjct: 584 RDSGQEAQAIALLRQQPASDRIDLTLADWAQQRGDNAAARAQYQTVLKRSPASEEARLGL 643 Query: 161 YFESCRIGDLNSAQ-RYATKALDI-----SPDAPWVTEAVVQQYVLAKEWSRAITFLN-- 212 GD +A+ + A AL P +P + + +RA Sbjct: 644 AEALIADGDNAAAREQLA--ALQTPGAGGEPRSPGTQRRIANAQAALGDTARAQQAFAVL 701 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIAS---YHDAIESLKLCDN 258 + ++ A++L + G + Y DA+ + + Sbjct: 702 AATARTQPPSQETALVLRDAARFQRQNGQPQQALQTYRDAMVASGIAPT 750 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 53/199 (26%), Gaps = 15/199 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A L L + + GD +A+ L SP Sbjct: 579 TANRLRDSGQEAQAIALLRQQPASDRIDLT----LADWAQQRGDNAAARAQYQTVLKRSP 634 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + + + + A L + + A GD + Sbjct: 635 ASEEARLGLAEALIADGDNAAAREQLAALQTPGAGGEPRSPGTQRRIANAQAALGDTARA 694 Query: 246 YHD----AIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKV---NPH-PEI 295 A + + A + AA+ + ++A P P Sbjct: 695 QQAFAVLAATARTQPPSQETALVLRDAARFQRQNGQPQQALQTYRDAMVASGIAPTRPAD 754 Query: 296 ANIYTHL-LSENTVGKLKR 313 +++T L ++ + LKR Sbjct: 755 NDVFTRLTRNDASDDWLKR 773 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 79/275 (28%), Gaps = 59/275 (21%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRI---------------------- 167 A+A + A L++ T AV L R Sbjct: 395 AVANKNDAAAERYYRQALRMDNTNSNAVRGLANLYRRQSPERADAFIATLSASQRRSIED 454 Query: 168 ------GDL--------NSAQRYATKA------LDISPDAPWVTEAVVQQYVLAKEWSRA 207 D + R+A A L + P++ W+T + A A Sbjct: 455 IERSLTNDRLEQQAATLEAQGRFAEAAALQRQRLALDPESVWITYRLANDLASAGARRDA 514 Query: 208 ITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDM---IASYHDAIES-LKLCDNSIMA 262 + Q ++ A + + A L + + + L+L Sbjct: 515 DIVMGQLAQRKAGDPEQVYAYGLYLSGSDRQRAAQSHLNTLARDKWTPNILELSQRLQTN 574 Query: 263 SIC-AAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALR 316 + A L ++ +A +L + P + +A+ + +N + + Sbjct: 575 ELMETANRLRDSGQEAQAIALL----RQQPASDRIDLTLAD-WAQQRGDNAAARAQ-YQT 628 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + + S E+ + +++ + G A + Sbjct: 629 VLKRSPASEEARLGLAEALIADGDNAAAREQLAAL 663 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 99/361 (27%), Gaps = 65/361 (18%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE 141 D Y+A G+ + A + + + +E L L Q + A Sbjct: 267 DPAYRARMQGMARVEEGQGAKAVSELTTAVKANPNDSEALGAL--AQAYSQQGNRARAVP 324 Query: 142 KLE-MMLQIPA-----------------------------------------------TR 153 LE + Q P T Sbjct: 325 LLEQALKQDPNSPNSGRWQSLLQVNRYWLLIQQGDAALKANNLAQAQQKYQQAATVDNTD 384 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--TEAVVQQYVLAKEWSRAITFL 211 +AV L + + +A+RY +AL + A + + + I L Sbjct: 385 SYAVLGLGDVAVANKNDAAAERYYRQALRMDNTNSNAVRGLANLYRRQSPERADAFIATL 444 Query: 212 NQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + ++ + E L ++ +G + + L L S+ + A Sbjct: 445 SASQRRSIEDIERSLTNDRLEQQAATLEAQGRFAEAAALQRQRLALDPESVWITYRLAND 504 Query: 270 LISQNKKRKAEVIL-EKIWKVNPHPEIANIYTHLLSENTVGKLK--RALRLEE--INKES 324 L S +R A++++ + + PE Y LS + + L Sbjct: 505 LASAGARRDADIVMGQLAQRKAGDPEQVYAYGLYLSGSDRQRAAQSHLNTLARDKWTPNI 564 Query: 325 VE-SLVI----VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 +E S + + + A + Q L + I L LA Q + Sbjct: 565 LELSQRLQTNELMETANRLRDSGQEAQAIALLRQQPASDRIDLTLADWAQ-QRGDNAAAR 623 Query: 380 Y 380 Sbjct: 624 A 624 >gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469] gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469] Length = 1297 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 21/266 (7%) Query: 117 HNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 NE LL A E ++ ++ + A + + A Sbjct: 56 ENESFSALLVNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAA 115 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KAL I + V + Y L + A+ + K + + L R Sbjct: 116 YIIEKALQIDRRSKEVWGTKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPK 175 Query: 235 ENA---DKGDMIASYHDAIESLKLCDNSIMAS-------ICAAKSLISQNKKRKAEVILE 284 + KG + E +K+ + + + + + ++ R+A L+ Sbjct: 176 DLEILFKKGVQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALK 235 Query: 285 KIWKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K K++P+ + +Y LK +I+ +S + + L + Sbjct: 236 KAIKIDPNDKKSWINLGILYK--KRGEYEEALKCFKEAIKIDPNDKKSWYLEA-SVLHIL 292 Query: 340 SID-QAHAKAMLAMKIAPRKEIFLLL 364 D +A A+++ + E LLL Sbjct: 293 ERDSEALKSINRALELDKKYESALLL 318 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 22/165 (13%) Query: 134 RQYNIAHEKLEMMLQ-IPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A + +E ++ + +Y ++GDLNSA YA KA ++ Sbjct: 867 GDLQEAIKAIERAIEWKKDAKFYLLGSR-IY---LKMGDLNSAYNYANKAFEL----EDS 918 Query: 191 TEAVVQQYV---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-GDMIASY 246 +A + ++ I L K + N A+ L+ ++LE ++ D + Y Sbjct: 919 DDARINLASIMFELGKYDDVIALL----KPLGKNNNLDALRLLGKALEAEERYEDAVKIY 974 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + ++ K +S I + ++ NK +A E+ ++P Sbjct: 975 NKVVDIDKKDKSSW---ISLGRCYLTLNKYNEAIKAFERASLIDP 1016 >gi|134084415|emb|CAK43198.1| unnamed protein product [Aspergillus niger] Length = 537 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 94/316 (29%), Gaps = 52/316 (16%) Query: 60 AVSRFFLSCPAMLFHMLHKRN----YDKGYKALYTG--------LMSIAAH-----NIPL 102 + RF L D+ + L G LM+ A + Sbjct: 150 KMLRFVSQAEEALSQDRGVSMVLFCLDQARQLLGQGVKEPRKWTLMTAEAQLKMGNDNSY 209 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 + +S + ++ + A + L+M L + Sbjct: 210 GKAQDIAISMLRVNSQDPDALMIRARAFYGMGDTEQALKLLKMCLGLDP----------- 258 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 D+ +A + + A AK++ RAI + + Sbjct: 259 ------DMKAAIKLLRTVQKLVRTKEEGNTAF-----KAKDYRRAIDLWGEALTVDPKNK 307 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A +L R+ + + ++ D E+L+L + A AK+ +A Sbjct: 308 DQNAKILQNRAQAYINLKEYDSAVADCNEALRLDPGYLKAQKMRAKAHGGAGNWEEAVRD 367 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + + + NP + +++RA E+ K + + ++ + G + Sbjct: 368 YKAVAESNP-----------TEKGIQEEIRRAEF--ELKKAQRKDYYKILGVSKDAGEQE 414 Query: 343 QAHAKAMLAMKIAPRK 358 A +A++ P K Sbjct: 415 IKKAYRKMAIQYHPDK 430 Score = 40.3 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 64/183 (34%), Gaps = 26/183 (14%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++RAI + + + ++ L R+ +A+ D + +L + Sbjct: 54 KDGNYARAIEEFTKALEISPNS----SVYLSNRAAAYMAANQYLAALEDCERACELDPTN 109 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 A+ L S + +A +L ++ P + + A ++ Sbjct: 110 TKIMYRLARILTSLGRPTEALDVLS---RIEP------------PASATDRAA-AEKMLR 153 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHNTD 376 ++ E+L +++ + +DQA +K + L+ AQ++ N ++ Sbjct: 154 FVSQAEEALSQDRGVSMVLFCLDQARQLLGQGVKEP---RKWTLMTAEAQLKMGNDNSYG 210 Query: 377 KIL 379 K Sbjct: 211 KAQ 213 >gi|85001147|ref|XP_955292.1| hypothetical protein [Theileria annulata strain Ankara] gi|65303438|emb|CAI75816.1| hypothetical protein, conserved [Theileria annulata] Length = 540 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 12/157 (7%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +Y+ A + L TR+ SL + R+ + K I+P+ Sbjct: 310 KYDDAISCYQKSLIENNTRQT--RSLLSDLERLKERK------EKEAYINPELAEQHREK 361 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 +Y ++ A ++ K + A L R+ + ++ D ++++ Sbjct: 362 GNEYFKEFKFPEAKKEYDEAIKRNP----SDAKLYSNRAAALLKLCEYPSALADCNKAIE 417 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 L + A + + KA +K KV+P Sbjct: 418 LDPTFVKAWARKGNLHVLMKEYHKAMDAYDKGLKVDP 454 >gi|315047698|ref|XP_003173224.1| DnaJ domain-containing protein [Arthroderma gypseum CBS 118893] gi|311343610|gb|EFR02813.1| DnaJ domain-containing protein [Arthroderma gypseum CBS 118893] Length = 327 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 30/268 (11%), Positives = 77/268 (28%), Gaps = 40/268 (14%) Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173 + + LL + LA A + + ++ +G + A Sbjct: 28 PDTPVSSLLSSAKTHLASGSAENALLYFNAAIDKDPSNYLSIFQRG--AAYLSLGRHSRA 85 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232 + L + P + + + W+ A L K + + + + A Sbjct: 86 ADDFNRVLKLKPGFEGALLQRGKLRMRSGNWAGAKEDLEAAGKPGEGDLVQLHEAQVAAL 145 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + E+A+K + +S +I A + R Sbjct: 146 AAEDAEKKQDWEACVA--QSN--------IAIMKAMGSTELRRIR--------------- 180 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLA 351 HL + + RL +++ +V+ + + + + + ++ Sbjct: 181 -----GKCHLERGDIQEGINDLTRLTQLSPNNVDPYLQISAMLFYSLADTERGMDHIRKC 235 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKIL 379 + P +I ++ + N+ +I Sbjct: 236 LHSDPDSKICS---RLFRGEKRNSKQIK 260 >gi|221310175|ref|ZP_03592022.1| hypothetical protein Bsubs1_12411 [Bacillus subtilis subsp. subtilis str. 168] gi|221314497|ref|ZP_03596302.1| hypothetical protein BsubsN3_12332 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319419|ref|ZP_03600713.1| hypothetical protein BsubsJ_12258 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323695|ref|ZP_03604989.1| hypothetical protein BsubsS_12387 [Bacillus subtilis subsp. subtilis str. SMY] Length = 449 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 87/248 (35%), Gaps = 16/248 (6%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC-RIGD 169 + NE ++ ++ A+ Y A + + + V+ ES G+ Sbjct: 153 AKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESLSASGE 212 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A + KA+D +PD + A + + + ++ + KE + + L Sbjct: 213 FEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPSYTSLY 267 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + S +G + A E ++ + + + AAK + K + + +L++ + Sbjct: 268 MPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQEALAL 327 Query: 290 NP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 +P H +A + E+ + + +E + ++ E+ ++ Sbjct: 328 DPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTELEQYEE 384 Query: 344 AHAKAMLA 351 A A Sbjct: 385 AKQSFEAA 392 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 10/144 (6%) Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L +K+K+ + N LI +++ + G+ + ++ K + A AA+ Sbjct: 17 LYRKRKDRSDLN-----TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLY 69 Query: 271 ISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVES 327 KA ++ + + P+ E+ N Y LL + L + E + ES Sbjct: 70 YEWGDVEKAISLISDLHDLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPES 129 Query: 328 LVIVSKIALEMGSIDQAHAKAMLA 351 L++++ + G + + K A Sbjct: 130 LLLMADLYQMQGLFEVSEQKLFQA 153 >gi|205352618|ref|YP_002226419.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272399|emb|CAR37279.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627683|gb|EGE34026.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 371 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 27/249 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A+ K D + Sbjct: 65 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAAGLYDRAEDMFNKLTDETEFRVG 124 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++Q Y L +W +AI + K K+ R A +L+ DM + Sbjct: 125 ALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDMDRAMAL 184 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + NS SI + +++ KA L+++ + L+SE Sbjct: 185 LKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KELVSETLE 235 Query: 309 GKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA-------MKIAP 356 +L + + + V + L + I +A + A ++ P Sbjct: 236 MLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITRQLQRHP 295 Query: 357 RKEIF-LLL 364 +F L+ Sbjct: 296 TMRVFHKLM 304 >gi|300866716|ref|ZP_07111400.1| exported hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335316|emb|CBN56560.1| exported hypothetical protein [Oscillatoria sp. PCC 6506] Length = 201 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 11/123 (8%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 GD + A T+A+ ++P+ P + + AI NQ + + Sbjct: 48 KLLKGDYSGAIEDFTEAIRLNPNQPGIYSNRGLARASKGDIQGAIADYNQAIRINPNY-- 105 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 AI + R L + + + D ++L+L N ++ ++ R Sbjct: 106 --AIGYLHRGLAYSALKNYQYALSDYDQALRLNPNL-------GEAYYNRGNIRHYLKEK 156 Query: 284 EKI 286 E Sbjct: 157 EAA 159 >gi|298708286|emb|CBJ48349.1| conserved unknown protein [Ectocarpus siliculosus] Length = 3821 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 84/298 (28%), Gaps = 73/298 (24%) Query: 127 VQIALAE------RQYNIAHEKLE----MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174 Q ++ A + + RE + L G A Sbjct: 66 AQALGLGRVLLSRGEHEEAALVYRVAASAAAAVDSNREHGEAQHGLGLALLATGRPEEAL 125 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN------------ 222 +A + PD P T + A + + A+T L + Sbjct: 126 VACREAERLDPDLPTATSCIGAILTDAGDIAGALTALRHAADKTERGEVTAGLWRDAEGT 185 Query: 223 ------RNRAILLIARSLENA-------------DKGDMIASYHDAIE------------ 251 R A LL A ++ A GD A+Y+ + Sbjct: 186 ADTIHGRLGAALLAAGEVDEAIEVLTRVELEARRAGGDPHAAYNLGVAWQTKGETEKAIV 245 Query: 252 ----SLKLCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPE-IANIYTHL--- 302 + L + L+ + +AE + L + P +A Y++L Sbjct: 246 AYSRATDLAPTLAAPRVNLGAQLLQSGRLAEAEAVLLSAAERARDDPISLAATYSNLGAV 305 Query: 303 -----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 E + RA++ SLV ++K+ E+G ++QA AM Sbjct: 306 FQRSGKPEEALESYSRAVQSGAGRP----SLVHIAKLHHELGQLEQAREACRRAMLEE 359 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 50/196 (25%), Gaps = 25/196 (12%) Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + NR L G + E+ +L + A+ C L A Sbjct: 99 DSNREHGEAQHGLGLALLATGRPEEALVACREAERLDPDLPTATSCIGAILTDAGDIAGA 158 Query: 280 EVILEKI-------------WKVNP------HPEI-ANIYTHLLSENTVGKLKRALRLEE 319 L W+ H + A + + + L R Sbjct: 159 LTALRHAADKTERGEVTAGLWRDAEGTADTIHGRLGAALLAAGEVDEAIEVLTRVELEAR 218 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL--LLAQ-IEQANSHNTD 376 + + G ++A A +AP L AQ ++ + Sbjct: 219 RAGGDPHAAYNLGVAWQTKGETEKAIVAYSRATDLAPTLAAPRVNLGAQLLQSGRLAEAE 278 Query: 377 KILYWTQSALHAMPDP 392 +L +A A DP Sbjct: 279 AVL--LSAAERARDDP 292 >gi|197124256|ref|YP_002136207.1| hypothetical protein AnaeK_3867 [Anaeromyxobacter sp. K] gi|196174105|gb|ACG75078.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. K] Length = 967 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 12/202 (5%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLK 254 +++ A L + ++ R A + +L + +G + + + Sbjct: 721 ARYRLGQYAAARAELERTARDG----RMPAEAAVWYALTDVAQGRAARGRTLLEKLAATR 776 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKL 311 A + ++L ++ + AE + P P +A L L Sbjct: 777 SPPPL--AHVALGRALEAEGRADDAEKAYQDAMARDPRAPEPALALGDLLLRRGRAGDAL 834 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 + ++ E+ + L G A A+ + P+ L L Sbjct: 835 PFLEKAVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLA 894 Query: 372 SHNTDKILYWTQSALH-AMPDP 392 + + L A DP Sbjct: 895 ESQPAEARRAAERGLAVAPRDP 916 Score = 36.5 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 63/226 (27%), Gaps = 7/226 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+G +A+ + V +R T L + Sbjct: 724 RLGQYAAARAELERTARDGRMPAEAAVWYALTDVAQGRAARGRTLLEKLAATRSPPP--- 780 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +A +G + +++ + ++ L+ + + A LEK Sbjct: 781 -LAHVALGRALEAEGRADDAEKAYQDAMARDPRAPEPALALGDLLLRRGRAGDALPFLEK 839 Query: 286 IWKVNPH-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++P PE A L + + +L ++S L Sbjct: 840 AVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLAESQPA 899 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 +A A + +APR LL + + AL A Sbjct: 900 EARRAAERGLAVAPRDPALLLAGARAAQADGDRAVARALAERALKA 945 >gi|26354607|dbj|BAC40930.1| unnamed protein product [Mus musculus] Length = 463 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + +L ++ A +E L + + + + R + Sbjct: 199 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 258 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A +AL SP + ++ + + + + L Sbjct: 259 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 295 Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +R+ + + ++ AI E+LKL MA +C A+ ++ +AE +K Sbjct: 296 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 355 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + H+ + + R R + +K+S + + + L++ A Sbjct: 356 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 405 Query: 347 KAMLAMKIAPRKEIF 361 K + A++ + + Sbjct: 406 KLLTALEKVAERRVC 420 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 38/236 (16%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKK 216 C GD A KAL + P+ P AVV + ++ L + + Sbjct: 143 GWALLKCGGGDYKQAMACFAKALKVEPENPEYNTGYAVVAYRQDLDDNFISLEPLRKAVR 202 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQN 274 E + +L +L+ D G+ + + E+ L S + + AAK ++ Sbjct: 203 LNPEDPYLKVLL----ALKLQDLGEHVEAEAHIEEA--LSSTSCQSYVIRYAAKYFRRKH 256 Query: 275 KKRKAEVILEKIWKVNP-----HPEIANIY------THLLSENTVGKLKRALRLE----- 318 + KA +L + + +P H + Y + L Sbjct: 257 RVDKALHLLNRALQASPSSGYLHYQKGLCYKQQISQLRTSRNRQPRRQDNVQELAQQAIH 316 Query: 319 ------EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 ++ + V ++++ E+ ++A A+ L+A IE Sbjct: 317 EFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKALNNK------TLVAHIE 366 >gi|86606961|ref|YP_475724.1| TPR repeat- and protein kinase domain-containing protein [Synechococcus sp. JA-3-3Ab] gi|86555503|gb|ABD00461.1| protein kinase domain/TPR repeat protein [Synechococcus sp. JA-3-3Ab] Length = 952 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 88/308 (28%), Gaps = 36/308 (11%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREF 155 + A S V ++ E + L + A E + + P + Sbjct: 448 GDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQLL--DFQGAIEDYTQALQLDPGHPKAC 505 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-------VTEAVVQQYVLAKEW-SRA 207 L ++ GDL A ++A+ + +A + + A Sbjct: 506 YRRGLARQAL--GDLQGAITDFSQAIALRATQGEEPSGAVAAAQAELYLQRAVAYLSNNA 563 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + A N A+ R L GD + D +L+L A + Sbjct: 564 LEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALADFNRALELDPRLAKAYLKRG 623 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--LRLEEIN---- 321 + + A L + IA + + + ++ G++ R L + Sbjct: 624 IAHLELGHLEAALADLNQA--------IALDASDVGARSSRGQVHRLLGDPLAALQDYTA 675 Query: 322 -----KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSH 373 + + +I E A A++ A + L+A+I Sbjct: 676 ALERDPRNPQLYFDRGQIYFEQEDWAAACEDFSQALQWAGQPGGPHGLDLMARIHLYRGM 735 Query: 374 NTDKILYW 381 ++ W Sbjct: 736 ARQRLEDW 743 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 72/241 (29%), Gaps = 20/241 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 L +A +AL ++P + + A+ N+ E + Sbjct: 559 LSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALADFNRAL----ELDPR 614 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + R + + + G + A+ D +++ L + + A + A Sbjct: 615 LAKAYLKRGIAHLELGHLEAALADLNQAIALDASDVGARSSRGQVHRLLGDPLAALQDYT 674 Query: 285 KIWKVNP-HPEI----ANIYTHLLSENTVGKLKRALRLEEIN--KESVESLVIVSKIAL- 336 + +P +P++ IY E+ + + + L ++++I L Sbjct: 675 AALERDPRNPQLYFDRGQIYFE--QEDWAAACEDFSQALQWAGQPGGPHGLDLMARIHLY 732 Query: 337 ------EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + A A ++ P+ L + + L A+ Sbjct: 733 RGMARQRLEDWQGALADFTALIQEQPQASQGFALRAAVHLVLGDEEAALADLDRAIGCNR 792 Query: 391 D 391 D Sbjct: 793 D 793 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 11/200 (5%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E R GDL A T A+ + P +W+ A+ + + Sbjct: 306 QEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAGAVEDFTRAIQLGG-- 363 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A R + G+ + D +L+L + +A + ++ ++A Sbjct: 364 --GDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAIE 421 Query: 282 ILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + ++N PE Y + G + + + + E+ Sbjct: 422 DYSRALELN--PEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARA 479 Query: 337 EMGSIDQAHAKAMLAMKIAP 356 ++ A A+++ P Sbjct: 480 QLLDFQGAIEDYTQALQLDP 499 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 90/288 (31%), Gaps = 22/288 (7%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G + + PLA + + N L Y QI + + A E LQ Sbjct: 655 SRGQVHRLLGD-PLAALQDYTAALERDPRNPQL-YFDRGQIYFEQEDWAAACEDFSQALQ 712 Query: 149 -----------IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 R + + R+ D A T + P A Sbjct: 713 WAGQPGGPHGLDLMARIHLYRGMARQ--RLEDWQGALADFTALIQEQPQASQGFALRAAV 770 Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI-ASYHDAIESLKLC 256 +++ + A+ L++ ++W A L + + + + + + D + L L Sbjct: 771 HLVLGDEEAALADLDRAIGCNRDWGLADAALAYRQRGDLHRQANRLQQAIADYTQVLALN 830 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE--IANI----YTHLLSENTVGK 310 A + A + +A ++ ++ P P+ + + + + + Sbjct: 831 PQERHALLWRALLWDQAGEIERALADYTQLLQLEPDPQTRLWALNNRGWAYAQQGDFAAA 890 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ ++ E + +++ + +G A A+++ + Sbjct: 891 IRDYTQVLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQGYE 938 >gi|326428775|gb|EGD74345.1| hypothetical protein PTSG_06355 [Salpingoeca sp. ATCC 50818] Length = 1374 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 45/152 (29%), Gaps = 22/152 (14%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---------SLYFESCRI 167 N Q + A + + L I T L + Sbjct: 1093 PNTAATLYEIAQAHRSMGNVEEAAQFYQRSLGI-YTAVLGERHPDLATVYSGLTQLALDC 1151 Query: 168 GDLNSAQRYATKALDIS-----PDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKK---- 215 GD ++A RY K LDIS P V Q +V + RA+ + Sbjct: 1152 GDYDTALRYLEKDLDISLDAHGEQHPDVGTTYAQYAHAHVGKGDLDRALECGEKSLAIFA 1211 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYH 247 E + + A+ A + A +GD S Sbjct: 1212 ATVGEDHMSTALAYDALAAVYAARGDEQRSQE 1243 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 23/123 (18%) Query: 290 NPHPEIANIYTHLLS-ENTVGKLKRALRLE------------EINKESVESLVIVSKIAL 336 HPEIA Y L ++ G+ RA E++ + + + +A Sbjct: 586 QQHPEIAMTYLELSDVYDSAGETARAHEYATTALAILQRTVGELHPYTANANHSLGVLAS 645 Query: 337 EMGSIDQAHAKAMLAMKI--------APR-KEIFLLLAQIEQANSHNTDKILYWTQSALH 387 G D+A A A ++I P +L +++I N + + T++AL Sbjct: 646 GAGDYDKAMAFAEKDLEISRASLGDMHPDVAATYLHISEILD-NKGDYTRARECTETALR 704 Query: 388 AMP 390 + Sbjct: 705 ILR 707 >gi|269839838|ref|YP_003324531.1| methyltransferase type 12 [Thermobaculum terrenum ATCC BAA-798] gi|269791568|gb|ACZ43708.1| Methyltransferase type 12 [Thermobaculum terrenum ATCC BAA-798] Length = 436 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 5/138 (3%) Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 +A+ + P+ A+ ++ A + ++ A E+ R R+ +A + Sbjct: 94 LASFEQAIALDPECGEAHCALGGALQEVGRFAEAEQ--HCRRSLALEFERPRSYFFLANA 151 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292 L + G ++ + +L L + A A + + +A +LE + P + Sbjct: 152 LCSL--GRLLEARECFRAALALDPSYSDAHWTLATVYRVKGRTAEALRVLECGSALAPDN 209 Query: 293 PEIANIYTHLLSENTVGK 310 PEI I L + Sbjct: 210 PEIPFILEALKGSYAPSR 227 >gi|254459760|ref|ZP_05073176.1| Alpha-2-macroglobulin N-terminal domain family protein [Rhodobacterales bacterium HTCC2083] gi|206676349|gb|EDZ40836.1| Alpha-2-macroglobulin N-terminal domain family protein [Rhodobacteraceae bacterium HTCC2083] Length = 1811 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 30/151 (19%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQ----------------------QYVLAK 202 D ++A A K + P W + ++ A Sbjct: 118 LSQQDRDAALVQAEKLGALHPGGQWTVQVLLDAVRDRRVEKNLKSAMHWQGAATAQSDAS 177 Query: 203 E-WSR-AITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAIESLK 254 + W+ A L K KN+ E + R L A R+ A + + +A+E + Sbjct: 178 DMWAEYARLALEVKGKNSTETRKLRQRALSAATNAYLRAPSAAAQVSALQIMAEAMEQTR 237 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + I A AA + + + K Sbjct: 238 RGRDMIPALRLAANLQPRDDIIAALDKAINK 268 >gi|119489716|ref|ZP_01622475.1| hypothetical protein L8106_13365 [Lyngbya sp. PCC 8106] gi|119454453|gb|EAW35602.1| hypothetical protein L8106_13365 [Lyngbya sp. PCC 8106] Length = 1112 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 8/133 (6%) Query: 126 EVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDI 183 E Q A + + P + Y E+ ++G L+ A +A+ + Sbjct: 31 EANQLQRSGQLEEAVGAYRQAIAENPD--FYWSYHNLGETLWKLGRLDEAVEVFRQAVAL 88 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN----RNRAILLIARSLENADK 239 +P A W + + AI Q + WN R +LL ++ K Sbjct: 89 NPSAAWSHFNLGEVLEQQGRTEEAIAAYRQALQFNPAWNEVKERLAELLLTVGRSSSSAK 148 Query: 240 GDMIASYHDAIES 252 G ++ A+ + Sbjct: 149 GARGSTLETALPA 161 >gi|83719090|ref|YP_442157.1| TPR domain-containing protein [Burkholderia thailandensis E264] gi|83652915|gb|ABC36978.1| TPR domain protein [Burkholderia thailandensis E264] Length = 626 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 95 GRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRALALAPGDASIHNN 154 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G A +AL++ P + + AI Sbjct: 155 LGNALNALGRHGDALAAFRRALELRPGHAGAHNNLGMALAALGDTEEAIAHFRAALAAEP 214 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + +L L +A A +L + + R A Sbjct: 215 RF--VAAHFNLGNALDAV--GRHAQALSAFESALALQPRFPLALFGLANALAALGRHRDA 270 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L + L +++ Sbjct: 271 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 324 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R G L+ A+ AL +P A + + E Sbjct: 23 AHRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 78 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A L + G + + +L L +A + +Q + A Sbjct: 79 NDAALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 138 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++ + P H + N L L R E+ + + + Sbjct: 139 QRALALAPGDASIHNNLGNALNALGRHG--DALAAFRRALELRPGHAGAHNNLGMALAAL 196 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G ++A A A+ PR Sbjct: 197 GDTEEAIAHFRAALAAEPR 215 >gi|78212361|ref|YP_381140.1| hypothetical protein Syncc9605_0817 [Synechococcus sp. CC9605] gi|78196820|gb|ABB34585.1| hypothetical protein Syncc9605_0817 [Synechococcus sp. CC9605] Length = 467 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 47/162 (29%), Gaps = 15/162 (9%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMM 146 G+ + A N A ++ E LV LL + ++ E + Sbjct: 11 KGVQAAMAGNHIEAENFFRQAIKESDTAIEGSMNLVRLLH-----MQGRHAETIRAFEEL 65 Query: 147 LQIPATREFAVYSLY---FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + LY + +GD +A R +P + + + + + Sbjct: 66 QTKAQIEKIHPQILYMVTQSALDLGDQKTALRNLRVLAPQNPKNSEIQCMLSKILIESGR 125 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + L Q + + ++ ++ G+ + Sbjct: 126 LVESKKVLEQAMLVNPD----DPSIATQLAITQSELGNYDKA 163 >gi|326430914|gb|EGD76484.1| tetratricopeptide TPR_2 repeat protein [Salpingoeca sp. ATCC 50818] Length = 660 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 78/310 (25%), Gaps = 87/310 (28%) Query: 129 IALAERQYNIAHEKLEMMLQIP-ATREFAVY---------SLYFESCRIGDLNSAQRYAT 178 ++ +++ A E L I T L GD + A + Sbjct: 368 AYDSKGEHDRAIACFEKALGIQVET--LGEKHPSIADSYLGLGIAYRSKGDFDKAIHFYE 425 Query: 179 KALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-------------- 216 KAL I P + + ++ RAI + Sbjct: 426 KALAIKVEALGKKHPSTATSCNNLGEACYSKGDYDRAIACYEKALAIQVETLGEKHPATA 485 Query: 217 ---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + RA + ++L + A + L + Sbjct: 486 VTLVNIGRVHNQTGGNERACAYMQQALAIEVEALGEKHPSTANTCINL--GFV------- 536 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 S+ + KA EK +A R L E + + S Sbjct: 537 --YASKGEYDKAIRYYEKA--------LAI---------------RVETLGEKHPTTATS 571 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMK--------IAPRKEIFLLLAQIEQANSHNTDKIL 379 + + E G+ ++A A A+ P ++++ ++ Sbjct: 572 YFTLGLLHDERGNKERACACIQHALDVRTAILGPDHPSTRKAE--RELQRIRGGDSKTKQ 629 Query: 380 YWTQSALHAM 389 W A+ Sbjct: 630 DWVLFAVCCP 639 >gi|312892332|ref|ZP_07751827.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] gi|311295116|gb|EFQ72290.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603] Length = 577 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 11/205 (5%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 LA ++ + + Q ++ + L +I + A E E + + ++ L Sbjct: 62 LAAELFNRILQIDPANDASMFEL--AKIKKIQNNEAGARELFERAVTVNRDNKYYWIGLA 119 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + DL + + + PD P Y + K + A+ +Q +K Sbjct: 120 ESYEKTNDLVKLENVFNELTRLDPDNPEYLFDKANAYFIEKRYDEALAIYDQLEKRLGLN 179 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + ++ R +G + + + E +K + + + ++ S KA Sbjct: 180 DD----IIANRQKIYLKQGKIDKAAAELEEMIKANPDQMRYYLLLSEIYNSNGFNDKALK 235 Query: 282 ILEKIWKVNP-----HPEIANIYTH 301 +LEK KVN H +A++Y Sbjct: 236 VLEKAEKVNSNSGMIHLALADVYKD 260 >gi|307107245|gb|EFN55488.1| hypothetical protein CHLNCDRAFT_133862 [Chlorella variabilis] Length = 425 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 E NKE E + V++ AL+ G +A A A+K+ P+ + LLLA+I++A Sbjct: 3 EANKEQAEKCLEVAEAALKAGDTAKAERFAGKALKLFPQDKARLLLARIKRAAGA 57 >gi|292488377|ref|YP_003531259.1| hypothetical protein EAMY_1901 [Erwinia amylovora CFBP1430] gi|292899572|ref|YP_003538941.1| hypothetical protein EAM_1862 [Erwinia amylovora ATCC 49946] gi|291199420|emb|CBJ46537.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946] gi|291553806|emb|CBA20851.1| Uncharacterized protein yciM precursor [Erwinia amylovora CFBP1430] gi|312172520|emb|CBX80776.1| Uncharacterized protein yciM precursor [Erwinia amylovora ATCC BAA-2158] Length = 389 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 86/253 (33%), Gaps = 16/253 (6%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R A+ L + G + A++ + +D + Sbjct: 83 GEVDRAIRIHQALMESDSLTYDQRLLAIQQLGRDYMAAGFYDRAEQMFGQLVDETDFRVG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W AI + K K + A +L+ D+ + Sbjct: 143 ALQQLLIIHQATSDWLNAIDAAERLVKLGKSRLKMEIAHFYCELALQAMSSDDLERAMSL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIANIYTHL 302 + NS SI + ++Q + KA + ++E K + + Y HL Sbjct: 203 LKKGEAADRNSARVSIMMGRIHMAQAEYAKAVQHLQRVIEQDKELVSETLDMLESCYRHL 262 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 E L R E N + + + ++ I + + A ++ P +F Sbjct: 263 --EQAPAWLSYLERCVEENTGAA-AELYLAGILDQQDGAEAAQTYITRQLQRHPTMRVFH 319 Query: 363 LLAQ--IEQANSH 373 L +++A Sbjct: 320 RLIDFNLQEAEDG 332 >gi|149375467|ref|ZP_01893237.1| hypothetical protein MDG893_16462 [Marinobacter algicola DG893] gi|149360172|gb|EDM48626.1| hypothetical protein MDG893_16462 [Marinobacter algicola DG893] Length = 1155 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 34/281 (12%), Positives = 82/281 (29%), Gaps = 27/281 (9%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAE-----RQYNIAHEKLEMMLQIPAT 152 L + E L VQI + + +I + E +L + Sbjct: 456 ASLYWRTRQPERALALLDFEPQDRQLAETVQIMRMDLANSLGRTDILKREYESLLTRSDS 515 Query: 153 RE---FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 L + D A + + P A+ + + +W Sbjct: 516 ELTPNLEER-LLNLAALFEDYPRALSLSEHLF-LETGQPRFLAAIAEYQLALGQWQELEQ 573 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + + + N R+L + +++A+ + +L + ++ + + Sbjct: 574 TLERWQTDVPTARNNPRY-WSLRALIHQRNDEVLAANDAYRAAWELAPD--DENLMISWA 630 Query: 270 LISQNKKRKAEVILEK-------IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + + L+ +P +A Y+ L L + + Sbjct: 631 WLQLANAEQFADTLQALLARIGDAPSPAAYPVLAYGYSAL--GQPRKALDWFRQGMKTRS 688 Query: 323 ESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEI 360 + +E L+ +++ + G+ A KA ++ P Sbjct: 689 DDIEWLLATARLLEQTGAPGTATDLRQKAAAKLREDPSTRA 729 >gi|149176851|ref|ZP_01855461.1| probable O-linked GlcNAc transferase-putative TPR-containing transmembrane protein [Planctomyces maris DSM 8797] gi|148844288|gb|EDL58641.1| probable O-linked GlcNAc transferase-putative TPR-containing transmembrane protein [Planctomyces maris DSM 8797] Length = 703 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 73/226 (32%), Gaps = 41/226 (18%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + Q +A K PD + + +EW AIT L Q K Sbjct: 504 LMQLERFHEARDLLQPFAEK----YPDNLQIQRFLGSILTQTREWQAAITHLEQAHKLDP 559 Query: 220 EWNRNRAILLIAR--SLENADKGDMIASYHDA----IESLKLCDNSIMASICAAKSLISQ 273 + + L A + E + + + + + A ++L+L + A A++ I Sbjct: 560 DDSEICNNLGSAYEKAAETSQQDNTVELFETAARFWQKALRLDPRNSFARYNLARNKIRL 619 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 + +A L ++ + +P E+A + L ++ + Sbjct: 620 EQHSEALADLNQLLEEHPEFELAE--------------QGLEPLV-MSPD---------- 654 Query: 334 IALEMGSIDQAHAKAMLAMK------IAPRKEIFLLLAQIEQANSH 373 L A + P ++ LLLA+I + S Sbjct: 655 SNLTAEEFQAAARNLEQLARFYEQTGRKPFQKHALLLAEIARRRSG 700 >gi|114327486|ref|YP_744643.1| TPR repeat-containing protein [Granulibacter bethesdensis CGDNIH1] gi|114315660|gb|ABI61720.1| tetratricopeptide repeat family protein [Granulibacter bethesdensis CGDNIH1] Length = 552 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 57/215 (26%), Gaps = 23/215 (10%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRYATKA 180 + A E + A + + + L E + +A +A Sbjct: 11 RARAAHREGRLEDAENAYRQAWRENQSDPAPAHLLGL--LLIE---RQEYAAAAAILRQA 65 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + ++P + + + A T + + + A+ + D G Sbjct: 66 VKLAPQDSAIQNTLAHACLKDLRHEEAETAFRNAL-HLEPNRPDYAV---GLASLLHDLG 121 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----I 295 + ++ + A + +A L + P +P+ + Sbjct: 122 RSEEAVTLMRGAVAASPDHEAAEEALGTLCAATGALEEAVPYLTRAVLRQPDNPDLLLSL 181 Query: 296 ANIYTHL-LSENTVGKLKRALRLEEINKESVESLV 329 A L E L+RAL L + Sbjct: 182 AGACKDLGRPEEAEPLLRRALAL---RPGHPTTEF 213 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 39/149 (26%), Gaps = 4/149 (2%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + + L + ++ A L + R L +G Sbjct: 65 AVKLAPQDSAIQNTLAHACLKDLRHEEAETAFRNALHLEPNRPDYAVGLASLLHDLGRSE 124 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A A+ SPD EA+ A+ +L + + LL++ Sbjct: 125 EAVTLMRGAVAASPDHEAAEEALGTLCAATGALEEAVPYLTRAVLRQPDNPD----LLLS 180 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSI 260 + D G + +L L Sbjct: 181 LAGACKDLGRPEEAEPLLRRALALRPGHP 209 >gi|159900535|ref|YP_001546782.1| TPR repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893574|gb|ABX06654.1| Tetratricopeptide TPR_2 repeat protein [Herpetosiphon aurantiacus ATCC 23779] Length = 628 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 24/215 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFES----CRIGDLNSAQRYATKAL 181 Q+ + + Y A E + ++ P E+ Y E IGD +A+R +++ Sbjct: 428 AQVYDSLKDYPKAIEYYSLTIEMDPNYAEY-----YNERANIYLHIGDYAAAERDYQRSI 482 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++SP V + Q Y + + + +AI ++ + + + L R+ G Sbjct: 483 ELSPPYTEVWTNLGQCYQVQEHFEKAIGAFSRAL----DIDPKNVVALNHRAECYEGLGQ 538 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT- 300 A+ D SLKL + A + + L + P++A +Y Sbjct: 539 TQAAIADYSASLKLKTSEASTFANRAILYYELGEIEASLADLNTAISLQ--PDLAELYEN 596 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++ + + A + ++++K Sbjct: 597 RAVALEALERHAEAE-------HDRQQAILLAKAH 624 >gi|124268651|ref|YP_001022655.1| Flp pilus assembly protein TadD [Methylibium petroleiphilum PM1] gi|124261426|gb|ABM96420.1| Flp pilus assembly protein TadD [Methylibium petroleiphilum PM1] Length = 535 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 6/162 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + + A Y+L + L+ A +A+ + P Sbjct: 95 GRLDEAVAAYRRSVALKPDFAVAHYNLGTALKDLQQLDEAVTSLRRAVALQPGYAAAHAN 154 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + AI + ++ R+ D A+ ++L Sbjct: 155 LGAVRQAQGHLDDAIACYRAALAITPTARAHLSLASALRAHGLLD-----AAAASLRDAL 209 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE 294 L A ++L Q + A +++P HPE Sbjct: 210 ALDPAYADAHNNLGETLWDQGRVDDALASYRAAHRLDPAHPE 251 >gi|134291883|ref|YP_001115652.1| cellulose synthase domain-containing protein [Burkholderia vietnamiensis G4] gi|134135072|gb|ABO59397.1| cellulose synthase operon C domain protein [Burkholderia vietnamiensis G4] Length = 1482 Score = 42.2 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 82/254 (32%), Gaps = 7/254 (2%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHE 141 +G AL + A ++ A + + + + Y Y A + + A Sbjct: 326 RGIVALKQERFAQARSDLERASRGGNAARWRSALDSATYWFYTSSALGAQSNGDFAQAKA 385 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 E + + A L D A++ AL D P +V Sbjct: 386 LFERAILADPSNVTAQVLLGDALLENRDAPGAEQAYRMALRRQSDNPDAMRGLVGALAAQ 445 Query: 202 KEWSRAITFLNQ----KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 A+ F Q ++ A R R+ A++ + GD+ A+ ++L Sbjct: 446 GRADEALQFATQLSAEQQAKAGGLERLRSTAEAAQARQAEAHGDLGAARSLFEDALAGNP 505 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALR 316 + + A+ + Q A +++ + P P+ A LL+E T R Sbjct: 506 DDPWLRLDLARVYVRQGAIASARSLMDGLLAERPDMPD-ALYAGALLAEQTQDWSVGLQR 564 Query: 317 LEEINKESVESLVI 330 LE I + + Sbjct: 565 LERIAPAQRTAAMT 578 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 69/209 (33%), Gaps = 30/209 (14%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + P A + + ++ + + + + L+ A + + A + + + + Sbjct: 413 DAPGAEQAYRMALRRQSDNPDAMRGLVGALAAQ--GRADEALQFATQLSAEQQAKAGGLE 470 Query: 159 SL--------YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 L ++ GDL +A+ AL +PD PW+ + + YV + A + Sbjct: 471 RLRSTAEAAQARQAEAHGDLGAARSLFEDALAGNPDDPWLRLDLARVYVRQGAIASARSL 530 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS------- 263 ++ + L A +L D ++ A+ Sbjct: 531 MDGLLAERPDMPD----ALYAGALLAEQTQDWSVGLQRLE---RIAPAQRTAAMTTLQHR 583 Query: 264 ------ICAAKSLISQNKKRKAEVILEKI 286 + A L+ ++ KA V+L + Sbjct: 584 LWVGQQVALATRLVRNGQQAKALVVLHEA 612 >gi|196232599|ref|ZP_03131451.1| AAA ATPase central domain protein [Chthoniobacter flavus Ellin428] gi|196223361|gb|EDY17879.1| AAA ATPase central domain protein [Chthoniobacter flavus Ellin428] Length = 452 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 48/115 (41%), Gaps = 3/115 (2%) Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL- 303 +++ + +++ + A + + + +A + E++ ++P PE +L Sbjct: 4 LDPLRQAVAVSPDNVPLLLLLAHACLDEWSLDEARSVFERVLTLDPTRPEARVGIARILH 63 Query: 304 -SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 S T + R L N + + ++++++ G+++ A A+ + P Sbjct: 64 LSGKTSEAVVRTEALIVQNPQFAPAHLLLARLHAGEGNLEAARTSYARALALDPT 118 >gi|220919039|ref|YP_002494343.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956893|gb|ACL67277.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 970 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 12/202 (5%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLK 254 +++ A L + ++ R A + +L + +G + + + Sbjct: 724 ARYRLGQYAAARAELERTARDG----RMPAEAAVWYALTDVAQGRAARGRTLLEKLAATR 779 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV---NPHPEIANIYTHLLSENTVGKL 311 A + ++L ++ + AE + P P +A L L Sbjct: 780 SPPPL--AHVALGRALEAEGRADDAEKAYQDAMTREPRAPEPALALGDLLLRRGRATDAL 837 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 + ++ E+ + L G A A+ + P+ L L Sbjct: 838 PVLEKAVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLA 897 Query: 372 SHNTDKILYWTQSALH-AMPDP 392 + + L A DP Sbjct: 898 ESQPAEARRAAERGLAVAPRDP 919 Score = 36.8 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 64/226 (28%), Gaps = 7/226 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+G +A+ + V +R T L + Sbjct: 727 RLGQYAAARAELERTARDGRMPAEAAVWYALTDVAQGRAARGRTLLEKLAATRSPPP--- 783 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + +A +G + +++ + ++ L+ + + A +LEK Sbjct: 784 -LAHVALGRALEAEGRADDAEKAYQDAMTREPRAPEPALALGDLLLRRGRATDALPVLEK 842 Query: 286 IWKVNPH-PEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++P PE A L + + +L ++S L Sbjct: 843 AVALDPAEPEARRALGAARLAGGEPSAARAELDAVLLARPKDAAALRLLSAAWLAESQPA 902 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 +A A + +APR LL + + AL A Sbjct: 903 EARRAAERGLAVAPRDPALLLAGARAAQADGDRAVARALAERALKA 948 >gi|115377936|ref|ZP_01465120.1| DnaJ domain protein [Stigmatella aurantiaca DW4/3-1] gi|310822318|ref|YP_003954676.1| DnaJ domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115365041|gb|EAU64092.1| DnaJ domain protein [Stigmatella aurantiaca DW4/3-1] gi|309395390|gb|ADO72849.1| DnaJ domain protein [Stigmatella aurantiaca DW4/3-1] Length = 319 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 23/197 (11%) Query: 70 AMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 + L + + + L G ++ + A K + + + E L EV+ Sbjct: 137 SRLTRHPYLARTHRLTELLTRGKAALDRGDFEQATKDLNQALAVDSKNREASTLLGEVR- 195 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + N A Q L E+ + +L SA + KA + P Sbjct: 196 -----RRNEAQRGKRDFEQ----------GL--EAEKQQNLPSALEFYRKACSLDPQHAE 238 Query: 190 VT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A L +W+ + + A + R +L + D + Sbjct: 239 AAFRAARVSRALGADWNEQRVHAQRAVELAPDRIPQRLLL----AQILLDGKAGNIAKRH 294 Query: 249 AIESLKLCDNSIMASIC 265 E LKL + AS Sbjct: 295 LEEVLKLDPKNAEASAL 311 >gi|148654935|ref|YP_001275140.1| hypothetical protein RoseRS_0774 [Roseiflexus sp. RS-1] gi|148567045|gb|ABQ89190.1| TPR repeat-containing protein [Roseiflexus sp. RS-1] Length = 1534 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 24/186 (12%) Query: 130 ALAERQ-YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + Y A + E +L A+ L S R+G L+SA +AL+I PD P Sbjct: 49 AFLSNRQYEEARIEFEKVLSFDPEHIPALVGLGMTSERLGQLSSAIAAFERALEIKPDLP 108 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + +++ Y A W E+ R + + + A + + + Sbjct: 109 ELRSQLLRLYTEA--W-------------GSEYAHLR-LSRVGLARLYAKGHMLPQAISE 152 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-----YTHLL 303 + + + + A + A++L ++ +A + I HP++ Y L Sbjct: 153 FRQVVADQPDRLDARVALAEALWRDEQEEEALEVCRAILVS--HPDVLKANLILGYIELA 210 Query: 304 SENTVG 309 S N G Sbjct: 211 SGNPSG 216 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 23/221 (10%), Positives = 72/221 (32%), Gaps = 15/221 (6%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + DL+ A L+ P + + + ++ +++ A + + Sbjct: 14 RQWLESDDLDRAIGMVQHILETYPKCLEAHQMLGEAFLSNRQYEEARIEFEKVLS----F 69 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + L+ + + G + ++ +L++ + + A + Sbjct: 70 DPEHIPALVGLGMTSERLGQLSSAIAAFERALEIKPDLPELRSQLLRLYTEAWGSEYAHL 129 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 L ++ +A +Y + ++ + +++ V +++ Sbjct: 130 RLSRV-------GLARLYA--KGHMLPQAISEFRQVVADQPDRLDARVALAEALWRDEQE 180 Query: 342 DQAHAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKILYW 381 ++A + P + L+L IE A+ + + + YW Sbjct: 181 EEALEVCRAILVSHPDVLKANLILGYIELASGNPSGE-QYW 220 >gi|78484985|ref|YP_390910.1| TPR repeat-containing protein [Thiomicrospira crunogena XCL-2] gi|78363271|gb|ABB41236.1| hypothetical protein with a tetratrico peptide repeat (TPR) motif; predicted membrane protein [Thiomicrospira crunogena XCL-2] Length = 516 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 17/128 (13%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + A + L+ A++ + + + G++++A + +ALD+SP Sbjct: 331 AYQKNDFQQAEQHYLAALKKNPKNLTALFGMGATAAKQGEVHAALNFYRQALDVSPYNKE 390 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR---SLENADKGDMIASY 246 AV L ++ ++ ++ + +A G A Sbjct: 391 AETAV--------------AILEATLTQSEPASKRLKFMINQSPNNAKLHAALGHQYAKQ 436 Query: 247 HDAIESLK 254 + I++ K Sbjct: 437 KNWIKAQK 444 >gi|330892509|gb|EGH25170.1| TPR domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 510 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 28 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 84 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 85 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 143 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 144 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 200 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 201 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 250 >gi|330995749|ref|ZP_08319646.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] gi|329574479|gb|EGG56044.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] Length = 491 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 95/279 (34%), Gaps = 60/279 (21%) Query: 141 EKLEMMLQIPATREFAVYSLYFES----------CRIGDLNSAQRYATKALDISPDAPWV 190 E MLQ S+Y E+ D + A AL+I P + Sbjct: 19 ALYEQMLQ-------GGQSVYLEADELTDIAEYYLVQNDTDKAMACIQYALNIHPGSIDP 71 Query: 191 TEAVVQQYVLAKEWSRA---------------------ITFLNQKKKNAKEWNRNR---- 225 + +Q + + A + K++ A + + Sbjct: 72 LIFLARQKMFNGDIEGAKTIRDCITDPNDREVIFLNAELLLREGKEQEATTYLSEKAETE 131 Query: 226 ----AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A+ + D G + + +L + ++ A LIS N+ ++A Sbjct: 132 EEDAALFAYDTATLFLDYGYLEQAAQWGQRALDMEPDNEKFLKFKADHLISSNRPKEAIE 191 Query: 282 ILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 IL + +NP H + Y + E+ ++ A I++ ++L++ + Sbjct: 192 ILNSLLDINPYNLNAWH-SLGEAYF--VCEDFSKTMETADFALAIDEHDAQALLLKANSL 248 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLL-----LAQIEQ 369 L+ ++D+AH + K P EI L L+ +E+ Sbjct: 249 LQQQNLDEAHQLYLRYFKEHPSNEIPYLFDGVCLSALER 287 >gi|323139109|ref|ZP_08074167.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis sp. ATCC 49242] gi|322395673|gb|EFX98216.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis sp. ATCC 49242] Length = 772 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 76/233 (32%), Gaps = 13/233 (5%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 + ++ L + + E + ++ P R ++ Sbjct: 545 RAIRIEAAVALADQPADTLSKEDASRLEAAWAEYEASQRLIADRPEGRANL--GMFLLRR 602 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 A+ A L + P A ++ + Y + + + L + + + Sbjct: 603 GKPAEAEAEYLAG--LKLEPAAAPLSVNLADLYRGQGKEAESEQVLRKAIAISPDA---- 656 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A A L + + + +++L + + +L S +++++ +L+K Sbjct: 657 AAGHHALGLSLVRQRRYDEAISELGRAVELAPDESRYAYVNIVALQSLGREQESRALLDK 716 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRAL----RLEEINKESVESLVIVSKI 334 + P+ ++ + L +KRA L E+ + E + +++ Sbjct: 717 ALRRFPY-DMDILQLELQDAIQAEDVKRAAPVASTLAEMAPDDAEIARLAAEL 768 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 46/152 (30%), Gaps = 31/152 (20%) Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 +G + + + LKL + S+ A Q K+ ++E +L K Sbjct: 599 LLRRGKPAEAEAEYLAGLKLEPAAAPLSVNLADLYRGQGKEAESEQVLRKA--------- 649 Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 I+ ++ + + D+A ++ A+++A Sbjct: 650 ----------------------IAISPDAAAGHHALGLSLVRQRRYDEAISELGRAVELA 687 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 P + + + + + + AL Sbjct: 688 PDESRYAYVNIVALQSLGREQESRALLDKALR 719 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 67/223 (30%), Gaps = 23/223 (10%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A SQ+ L L + A + L++ +L Sbjct: 573 AAWAEYEASQRLIADRPEGRANL-GMFLLRRGKPAEAEAEYLAGLKLEPAAAPLSVNLAD 631 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 G +++ KA+ ISPDA A+ V + + AI+ L + + A + + Sbjct: 632 LYRGQGKEAESEQVLRKAIAISPDAAAGHHALGLSLVRQRRYDEAISELGRAVELAPDES 691 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R + ++A G S ++L+ + + I ++A + Sbjct: 692 RYAYVNIVALQSL----GREQESRALLDKALRRFPYDMDILQLELQDAIQAEDVKRAAPV 747 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 A+ + ++ RL K+ Sbjct: 748 -------------ASTLAEMAPDDAE-----IARLAAELKDHR 772 >gi|291567441|dbj|BAI89713.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 715 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 12/206 (5%) Query: 160 LYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 LY ++ + A AL+ P+ + + L E+ +A + + Sbjct: 12 LYQQANTYLAKQQFSEAIASCKTALEYHPNLAPAYKIIGTVEQLQGEFDQAEASYKKALE 71 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 ++ A L + +N + I+ Y AIE + + A AK N+ Sbjct: 72 IEPDFAEVYANLGSLFAQQN-EWQSAISFYEKAIE---IKPDFGGAYRNLAKVFGQINQP 127 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEEIN----KESVESLVIV 331 KA L K + P Y + + GK +A+ L E + Sbjct: 128 NKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEIYPNVAEIHYNL 187 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + + A A+++ P Sbjct: 188 GETFVNCQQWKSAITAYKQALEMNPD 213 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 74/198 (37%), Gaps = 13/198 (6%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G+ + A+ KAL+I PD V + + EW AI+F + + ++ Sbjct: 56 QGEFDQAEASYKKALEIEPDFAEVYANLGSLFAQQNEWQSAISFYEKAIEIKPDFGGAYR 115 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS--ICAAKSLISQNKKRKAEVILE 284 L + + + ++++ + +I + I A++L +Q K +A + Sbjct: 116 NL----AKVFGQINQPNKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYT 171 Query: 285 KIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K ++ P H + + + + + + E+N + + + E Sbjct: 172 KAMEIYPNVAEIHYNLGETFVNCQQWKSA--ITAYKQALEMNPDLYYVYSRLGDVFTEQQ 229 Query: 340 SIDQAHAKAMLAMKIAPR 357 + +A A +K+ P Sbjct: 230 NYQEAIAAYQQCVKLKPD 247 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 91/232 (39%), Gaps = 11/232 (4%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + +++ A + L+I VY +L + + SA + KA++I PD Sbjct: 54 QLQGEFDQAEASYKKALEIEP-DFAEVYANLGSLFAQQNEWQSAISFYEKAIEIKPDFGG 112 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + + + ++A L + + + + +A++L+ ++G + Sbjct: 113 AYRNLAKVFGQINQPNKANYCLLKAIDIEPQNIKLTEYIEVAQTLD--NQGKFTQAIALY 170 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-----LS 304 +++++ N ++ ++ + + A ++ ++N P++ +Y+ L Sbjct: 171 TKAMEIYPNVAEIHYNLGETFVNCQQWKSAITAYKQALEMN--PDLYYVYSRLGDVFTEQ 228 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +N + + ++ + + +I + G I QA A + + P Sbjct: 229 QNYQEAIAAYQQCVKLKPDIDWIHFKLGEICKKQGDIKQAIAAYQKGITLQP 280 >gi|254442584|ref|ZP_05056060.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198256892|gb|EDY81200.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 872 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 79/253 (31%), Gaps = 48/253 (18%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 Q +L ++ALA+ Y +A + + L+ L S R GD Sbjct: 177 RAQEFGTAPVSAFLASGELALAKHDYKLASQTFQKGLEAHPRNSELWQGLAT-SFREGDR 235 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + YA +AL I+P + + + A+ + A L+ A+ Sbjct: 236 SKLIEYAERALSINPRLADTRVLIAEHLIAAESYDAAGEQLDLALIVNPLHPNALALK-- 293 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A + ++ + ++ +A + W+ N Sbjct: 294 -------------------------------AVLAYLRNENERGEELRATAL--STWRTN 320 Query: 291 PHPE------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P + ++ Y + ++ L E N + + +++ L +G D+A Sbjct: 321 PEVDYRIGQQLSRKY-RFEDGASSQRIALGLD-EFYNP----ARIQLAQDLLRLGLNDEA 374 Query: 345 HAKAMLAMKIAPR 357 A + P Sbjct: 375 WRHANAVYQSDPY 387 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 80/216 (37%), Gaps = 8/216 (3%) Query: 177 ATKALDISPDAPWVTEAVVQQYV-LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A + +I P A A+ A+ +L ++ ++ + + +L Sbjct: 103 ADRNYEIRPRLLLREAAFFSGRSDEARRQKDALGYLVNERSRRYAYDPENIVAVGKIALL 162 Query: 236 NADKGDMIAS--YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-H 292 + ++ + A E + A + + + ++++ + A +K + +P + Sbjct: 163 FNVEPKIVLENFFRRAQE-FGTAP--VSAFLASGELALAKHDYKLASQTFQKGLEAHPRN 219 Query: 293 PEIAN-IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+ + T + ++ A R IN ++ V++++ + S D A + LA Sbjct: 220 SELWQGLATSFREGDRSKLIEYAERALSINPRLADTRVLIAEHLIAAESYDAAGEQLDLA 279 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + P L L + + ++ +AL Sbjct: 280 LIVNPLHPNALALKAVLAYLRNENERGEELRATALS 315 >gi|251797283|ref|YP_003012014.1| hypothetical protein Pjdr2_3292 [Paenibacillus sp. JDR-2] gi|247544909|gb|ACT01928.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. JDR-2] Length = 294 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 9/196 (4%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A K L P +P Q VL ++ +A ++++ K E + + Sbjct: 26 YKEALIETEKLLRDDPHSPDPYALYAQICVLMGDYEKARHWVDEALKRDPEHH----LGW 81 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R + G+ A + E+L++ A L + K ++A+ + ++ Sbjct: 82 YVRVSLFYETGNEAAFHEAVREALRIDPYEAHYYYLQANQLNKKGKFKEAKEQIGIALEL 141 Query: 290 NP-HPEIANI--YTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P +P+ +I YT LL + V + L E L+ ++ A G Sbjct: 142 EPENPQYLSILSYTEALLGNDAVSRETEREAL-RYGAEEPIVLMYLAWSAARRGDYKLHE 200 Query: 346 AKAMLAMKIAPRKEIF 361 A+++ P ++ + Sbjct: 201 TYMRSAVRLNPDEKQY 216 >gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843] gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843] Length = 707 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 11/117 (9%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A +AL I+PD + + K +S A+ + + + +A L + Sbjct: 351 ALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSA-WQAWLGRGQ 409 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEK 285 +L+ K A+ES + A+ A A + + A+ LEK Sbjct: 410 ALDKLGKNQE------ALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALEK 460 >gi|153006387|ref|YP_001380712.1| hypothetical protein Anae109_3547 [Anaeromyxobacter sp. Fw109-5] gi|152029960|gb|ABS27728.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5] Length = 306 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 54/149 (36%), Gaps = 9/149 (6%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + +G L+ A+R A AL P A + + ++ + A+ Sbjct: 9 LVGRARAALEVGRLDEAERAARGALAAEPSAEDGHALLARVHLARGDHGEALRAAEGGVA 68 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E + + R+L G + A E+++L + + L + K Sbjct: 69 ATPESEWLQRL----RALALNGMGRRKEALAAADEAVRLQPDVAPGHFVRSVILATLKKL 124 Query: 277 RKAEVILEKIWKVNP-----HPEIANIYT 300 +A E+ +++P H ++ +++ Sbjct: 125 PEAREAAERALELDPEDAGHHAQLGDLWL 153 Score = 37.2 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 4/132 (3%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + + A L + E L GD A R A + +P Sbjct: 12 RARAALEVGRLDEAERAARGALAAEPSAEDGHALLARVHLARGDHGEALRAAEGGVAATP 71 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++ W+ A+ ++ + + A RS+ A + + Sbjct: 72 ESEWLQRLRALALNGMGRRKEALAAADEAVRLQPDV----APGHFVRSVILATLKKLPEA 127 Query: 246 YHDAIESLKLCD 257 A +L+L Sbjct: 128 REAAERALELDP 139 >gi|149197815|ref|ZP_01874864.1| hypothetical protein LNTAR_04991 [Lentisphaera araneosa HTCC2155] gi|149139036|gb|EDM27440.1| hypothetical protein LNTAR_04991 [Lentisphaera araneosa HTCC2155] Length = 3353 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 85/253 (33%), Gaps = 48/253 (18%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + L T + ++Y + ++++A L +P E + +E Sbjct: 552 KADLSDKETILLS--AIYDQ---SDEVDTAFEIIETKLQQNPQNELFLEQKLNLSKKHRE 606 Query: 204 WSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 W AI L + + R + +++++ E + + + Sbjct: 607 WDAAIATLTAITQLSPKHKATRIKDLVILSLKAEKTEDALKWIAVWKKTSASSTSPYIQE 666 Query: 262 ASI-----------------------------CAAKSLISQNKKRKAEVILEKIWK-VNP 291 ASI A+ L + K ++A+ + W+ VN Sbjct: 667 ASIYRNKMDYDKSSEVLKKAMFKFPENKTMPRLLAQDLSTSGKTKEAKSVY---WRMVNK 723 Query: 292 HPEIANIYTHLLS-------ENTVGKL-KRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++A + S ++++G+L ++ E N +S+ + ++++ G + Sbjct: 724 TEDLAEKLGLVRSIIQLSQNDDSMGELTQKLQGRLENNPQSIFPPLALAELHRSSGYYED 783 Query: 344 AHAKAMLAMKIAP 356 + A +I P Sbjct: 784 RRKFLLKATEIKP 796 >gi|109089880|ref|XP_001086535.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 1 isoform 2 [Macaca mulatta] Length = 478 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 43/143 (30%), Gaps = 17/143 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y A+ L + + Sbjct: 223 LALKLQDNGQEAEGEKYLEEALANMSSQTYVFRYAAKFYQRKGSVDEALELLKKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIAS-YHDAIESLKLC-----------DNSIMA 262 + + A+ ++ + KG + ++L +A Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKIDKMIRLAIFHFESAVENKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAEVILEK 285 + A+ I RKAE +K Sbjct: 343 HLDLARMYIEAGNHRKAEETFQK 365 >gi|146303596|ref|YP_001190912.1| hypothetical protein Msed_0813 [Metallosphaera sedula DSM 5348] gi|145701846|gb|ABP94988.1| TPR repeat-containing protein [Metallosphaera sedula DSM 5348] Length = 286 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 58/141 (41%), Gaps = 18/141 (12%) Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 L+ A++ +A+ L+ + A + A L K +A IL+K + P Sbjct: 5 LDRAEELIEENRLDEALSILRDV-ELVEAFVLRADILRRLGKVDEALRILDKGMEKFP-- 61 Query: 294 EIANIYTHLLSENTVGKLKRALRL-EEIN---------KESVESLVIVSKIALEMGSIDQ 343 +++++ + L+ +L E +N S E + +++ ++G ++ Sbjct: 62 -----FSYVILSSKAEILESLGKLDEALNTIDEVLSIIPYSSEHRFVKARLLFKLGRYEE 116 Query: 344 AHAKAMLAMKIAPRKEIFLLL 364 A+ + +++ PR ++ Sbjct: 117 ANLELAEVLRVNPRNVDARIM 137 >gi|94264704|ref|ZP_01288485.1| TPR repeat [delta proteobacterium MLMS-1] gi|93454870|gb|EAT05117.1| TPR repeat [delta proteobacterium MLMS-1] Length = 448 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 4/99 (4%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146 L G ++AA++ A ++H H E + L + A +Y A E + Sbjct: 35 LAAGRQAMAANDYEAAYHAFFAAFEEHPTHPE--INFLLGRAAFETGRYEEAVMAYERVL 92 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 L P + + L R+G A++Y + L +P Sbjct: 93 LSSPDSGRARLE-LARAYMRLGSGEIARQYFREVLATNP 130 >gi|332703231|ref|ZP_08423319.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332553380|gb|EGJ50424.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 565 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 23/302 (7%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-MLQIP 150 L+ + A A++ +S+ VYL + + A L+ +++ P Sbjct: 54 LVYLDAARAGKAQQADGALSKVLELDKRQEVYLELADLKWRLGKTEDAAVLLQDGLVRYP 113 Query: 151 ATREFAVY--SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + + +Y R + A L P + + + +++A Sbjct: 114 GDKWLTLRLADIYRLQQR---YDGAATTLETYLAAHPSDAEALSRQARLALERERFAQAR 170 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L +R+ +L R+ + ++L+ + A + A Sbjct: 171 DIL-----AKLPADRHSPEVLYLRAKAEVGLAQNRKAIATLRKALEKDPTYLPAVVELAY 225 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-----RALRLEEINKE 323 L +N +AE + ++ E+ T + + LK +AL L + + Sbjct: 226 ILELENDFAEAERVYVRLL------ELGEASTEVWIKLIDLNLKLNNPEKALSLAQSGPQ 279 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWT 382 S L+ + + L D+A + P ++ LA +E N++ LY Sbjct: 280 SKAFLLETAHLFLGQKFYDEASEVLTPLAQQEPMDADVRFYLALLEYEGRKNSEAALYQL 339 Query: 383 QS 384 Sbjct: 340 TQ 341 >gi|307245597|ref|ZP_07527683.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307259007|ref|ZP_07540738.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853299|gb|EFM85518.1| hypothetical protein appser1_8000 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306867031|gb|EFM98888.1| hypothetical protein appser11_8060 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 391 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 84 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 203 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 204 SKTLEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 259 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 260 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 318 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 319 HRFIHYQ--INEAEEGRAKESLMLL 341 >gi|298292160|ref|YP_003694099.1| hypothetical protein Snov_2184 [Starkeya novella DSM 506] gi|296928671|gb|ADH89480.1| Tetratricopeptide TPR_2 repeat protein [Starkeya novella DSM 506] Length = 372 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 7/137 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R + + A AL PD + + Y KE+ RA + + K + + Sbjct: 227 QRQKEYDEAVELLDAALRQQPDFLYPLINLGIIYAGRKEYDRADEYFARAVKQNPNYLVS 286 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 R A ++G + + ++ + + A + KA+ +E Sbjct: 287 R----TAWGDMLIERGLLDDAVIQYEAAVLISPHDDKLQAKLADLYERTGQPEKAQEQIE 342 Query: 285 KIWKVNPHPEIANIYTH 301 K K+NP I+ Y Sbjct: 343 KALKLNP---ISQAYLD 356 >gi|289678410|ref|ZP_06499300.1| TPR repeat-containing protein [Pseudomonas syringae pv. syringae FF5] Length = 508 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 38/227 (16%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK---- 216 Y + +G SA A +P A Q A + ++ ++ + + Sbjct: 25 YQIAEYMGADQSALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGD 84 Query: 217 ----------NAKEWNRNRAIL----------------LIARSLENADKGDMIASYHDAI 250 + + +L + ++L GD S + Sbjct: 85 THFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-L 143 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENT 307 E + I + A+ L S N+ ++A +LEK K +P+ + Y +L E Sbjct: 144 EDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQN 201 Query: 308 V--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + L + + E ++ + LE + D+A + Sbjct: 202 RMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 248 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 74/205 (36%), Gaps = 7/205 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L + ++ N A K S + +YL+E + + Q + + L L Sbjct: 292 LRQADILVSNGNGAEAAKRLSEARAEE-PDYAVQLYLIEAETLTSNDQLDRGWQVLNQAL 350 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSR 206 + +Y+ + + DL ++ + P+ A+ ++ Sbjct: 351 KQYPDDANLLYTRAMLAEKRNDLAQMEKDLRTIIKREPENAMALNALGYTLSDRTTRYTE 410 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A + + K + + +L + N G++ + ++L+ + +A+ Sbjct: 411 ARELIEKAHKISPD----DPAVLDSLGWVNYRLGNLDDAERYLRQALERFPDHEVAA-HL 465 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP 291 + L ++ ++R+A+ + K + P Sbjct: 466 GEVLWAKGEQREAKKVWAKALEQQP 490 >gi|256419985|ref|YP_003120638.1| hypothetical protein Cpin_0939 [Chitinophaga pinensis DSM 2588] gi|256034893|gb|ACU58437.1| hypothetical protein Cpin_0939 [Chitinophaga pinensis DSM 2588] Length = 287 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRALRLEEIN 321 A I++ + +A +L + ++NP + I ++ + + +++ + N Sbjct: 143 HAEDPAIAKWESSQAISLLGQAIELNPKNDSLKIKQALLYMNTGEPMVGVQKLRDVVAAN 202 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANS 372 ++ E+ + ++ +A++ D+A + + P + +LA+ + Sbjct: 203 PDNAEAQITLANLAIQSNQFDKAIERMESFTQKHPDEAKAVFVLAEAYRGKG 254 >gi|91775034|ref|YP_544790.1| tetratricopeptide TPR_2 [Methylobacillus flagellatus KT] gi|91709021|gb|ABE48949.1| Tetratricopeptide TPR_2 [Methylobacillus flagellatus KT] Length = 562 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 87/271 (32%), Gaps = 7/271 (2%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A+ +++ A + E++ L +IA Q+++A + Sbjct: 8 AIVVAYAAVSLGMGTAAGAATKTENPSPALTGEFVYKYLIGEIAGQRGQFDLASALFLDL 67 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + A + + D +A A+ + P + +A+ Q + + + Sbjct: 68 AKTSQDSRLAERA-AKTAVMGNDGRTAIDAASLWSQLDPSSAEAHQALTQMLINTGKLNE 126 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L N + L S + + A E + + A Sbjct: 127 AKPHLRALLANEEGRAGGFMFLNNLLSRQQ----NKAAVLSLVQELARDYPDLPEAHFAI 182 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEINKES 324 A + + + L + K+ P E+A + LL ++ + N + Sbjct: 183 AHAAWNAGNIDLSLNELSQADKLRPGWEMAALMRGQVLLGKSPAEAVAFYRSFLSTNTGA 242 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 E + +++I D+A A+ + ++ A Sbjct: 243 NEVRLALARILAGQKKFDEAKAEFIKLIEAA 273 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 87/278 (31%), Gaps = 23/278 (8%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL +Q A + + L + +Y L + R + A ++ +K Sbjct: 285 LLSLQANEL----PDAEKYFKEALGKGFKDKDQLYIY-LGQIAERKRNDEEALQWYSKVA 339 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 V AI L K+ + R + A L A + Sbjct: 340 PGEVRYVDAQLGVANVISRRDGIDAAIQSLE-NLKDLTDAQRAAIVHAQANVLTQAKRYQ 398 Query: 242 MIASY-HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + +AI +L + AA+ + + + L K+ P+ A Y Sbjct: 399 EAYARLENAINTLPNSPELVYDFAMAAERINKLDVMERELRKLIKM-----QPDFAQAY- 452 Query: 301 HLLSENTVGKLKRA-------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + L + + R + E++ + L + + +G +D+A A Sbjct: 453 NALGYSLADRNIRLDEAKAMIEKAHELSPDDHYILDSLGWVYYRLGDLDKALEYLRRAYA 512 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 P EI L ++ + + W AL A P+ Sbjct: 513 QQPDPEIAAHLGEVLWKQGKRDEAVKTWEA-ALSAFPE 549 >gi|323492365|ref|ZP_08097518.1| putative Zn-dependent protease [Vibrio brasiliensis LMG 20546] gi|323313412|gb|EGA66523.1| putative Zn-dependent protease [Vibrio brasiliensis LMG 20546] Length = 484 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 13/161 (8%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A++W + K +A ++L + D ++ + +K N+ Sbjct: 289 AAQDWF--------NRTEKKAAPSVKAAFQYGKALVHLDNKELDQASSILNNLIKQQPNN 340 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTH--LLSENTVGKLKRALR 316 + I+Q++ KA+ +LEK + P+ + I Y + + + +K R Sbjct: 341 RFYLDALSDLYIAQDQANKAQSMLEKALQSAPNNAVLTINYANSLVKQDKNSEAVKVLQR 400 Query: 317 LEEINKESVESLVIVSKIALEMG--SIDQAHAKAMLAMKIA 355 N E V ++S+ ++ +G D A +LA+K Sbjct: 401 YTHDNPEDVNGWHLLSEASIHLGLSDEDLAARAEILALKAN 441 >gi|309792081|ref|ZP_07686555.1| TPR repeat-containing transcriptional regulator LuxR [Oscillochloris trichoides DG6] gi|308225888|gb|EFO79642.1| TPR repeat-containing transcriptional regulator LuxR [Oscillochloris trichoides DG6] Length = 845 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 15/179 (8%) Query: 122 VYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 V LL Q E A L + P+ + + + G A A +A Sbjct: 423 VALLRGQFHQIEPYLAAAQASLSHATVAQPSLQATMLTLQANLAQMRGQTGEALALAEEA 482 Query: 181 LDISPDAPWVTEAVVQQ-----YVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARS 233 I+P A++ A +++ AI L + + ++ + + + + Sbjct: 483 RRIAPVGDLRLSALIALALGATQRQAGDFASAIVQLQRAIQTGQQIGDHVTAMLAVAHLA 542 Query: 234 LENADKGDM---IASYHDAI---ESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEK 285 L G + + DA+ E+ K + A A A+ + A L++ Sbjct: 543 LLTLQSGQLRFFVRIAEDAVAQTEAQKTAPFMVGAVHIALAQVYYEWGRVAAARETLQR 601 >gi|307254553|ref|ZP_07536387.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306862490|gb|EFM94450.1| hypothetical protein appser9_7990 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 338 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 83/265 (31%), Gaps = 18/265 (6%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 31 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 90 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYV-LAKEWSRAITFL 211 ++ L + + A A K + I P P ++ ++ L Sbjct: 91 SLTQLMTVYQKTKEWKKAINVAEKLIKIEPDTDKIPLSHYYCEYAQAIKNEDLDGHLSAL 150 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS-L 270 ++ + + + R +L +N + + + L+ + I I K+ Sbjct: 151 SKTLEYSPQCARASILLGDYYLAQNQFQS----ALKNYEHILQQDPDFISEVIEKIKACY 206 Query: 271 ISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEINKESVE 326 +++N E+ L + ++ H ++A Y K +L + Sbjct: 207 MAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGIIAAHSKLYQQLRQYPSMITF 265 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 266 HRFIHYQ--INEAEEGRAKESLMLL 288 >gi|262304987|gb|ACY45086.1| acetylglucosaminyl-transferase [Endeis laevis] Length = 288 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 49/160 (30%), Gaps = 6/160 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + H + L L I + A + + L + A +L Sbjct: 39 AEDCYGTALRLCPSHADSLNNL--ANIKREQGFTEDATKLYQKALDVFPEFAAAHSNLAS 96 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + G LN A + +A+ I P + ++ A+ + + + Sbjct: 97 VLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF- 155 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A + + D G++ + +LKL A Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDA 192 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A + + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVQDAEDCYGTALRLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + ++L + A A L Q K A + ++ ++ P A+ Sbjct: 66 EQGFTEDATKLYQKALDVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 >gi|218887207|ref|YP_002436528.1| hypothetical protein DvMF_2117 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758161|gb|ACL09060.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 207 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 8/119 (6%) Query: 165 CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + GDL+ RY +A PW V E AI L + K ++ Sbjct: 71 LQRGDLDGCLRYNEEAAQCRAKFPVPWSNIGFVHLQ--RGEPEEAIKALKKALKWDPDFI 128 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A + A ++ GD AS + E++K A A + + + +A Sbjct: 129 QAMATMGAAYFMQ----GDYEASIQISREAIKREPGFGPAYNNLALAHFERGEFAQAVQ 183 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 37/123 (30%), Gaps = 4/123 (3%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +A+ A+ SP + + + + + + + ++ + Sbjct: 41 DFVAAEESFLSAVRNSPRLGEAYVQLGGICLQRGDLDGCLRYNEEAAQCRAKFP----VP 96 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + +G+ + ++LK + I A + Q + I + K Sbjct: 97 WSNIGFVHLQRGEPEEAIKALKKALKWDPDFIQAMATMGAAYFMQGDYEASIQISREAIK 156 Query: 289 VNP 291 P Sbjct: 157 REP 159 >gi|254410362|ref|ZP_05024141.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196182568|gb|EDX77553.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 560 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 8/160 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 +Y A + L+I +A + G A KAL+I PD + Sbjct: 379 GRYEEAIASYDKALEIQPDDYYAWYFRGIALSYL--GRYEEAIASYDKALEIQPDDYYAW 436 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + AI ++ + ++ + +L + + + Sbjct: 437 YFRGIALSYLGRYEEAIASYDKALEIKPDYQSGWS--HRGNALSFLKR--YEEAITSYEK 492 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +LK + A A Q A L++ K+NP Sbjct: 493 ALKFKPDYHYAWYFKACCYALQGNVDLAIENLQQAIKLNP 532 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 12/129 (9%) Query: 134 RQYNIAHEKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISP--DAPW 189 +Y A + L+I +A + G A KAL+I P + W Sbjct: 413 GRYEEAIASYDKALEIQPDDYYAWYFRGIALSYL--GRYEEAIASYDKALEIKPDYQSGW 470 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 K + AIT + K +++ +L+ G++ + + Sbjct: 471 SHRG--NALSFLKRYEEAITSYEKALKFKPDYHYAWYFKACCYALQ----GNVDLAIENL 524 Query: 250 IESLKLCDN 258 +++KL + Sbjct: 525 QQAIKLNPD 533 >gi|170695081|ref|ZP_02886229.1| TPR repeat-containing protein [Burkholderia graminis C4D1M] gi|170139933|gb|EDT08113.1| TPR repeat-containing protein [Burkholderia graminis C4D1M] Length = 539 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 48/168 (28%), Gaps = 6/168 (3%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G ++ + A S++ L + Q+ ++ + A LE L Sbjct: 63 GYIAAQQGDHARAADYLIQASERALLSWHQLKF--AAQVCRLAQRRDAAIALLERCLAQC 120 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A++ + +G+ A + P + + Sbjct: 121 RNDAAALHGVAVSLIELGESQRALEVFVHLCKVHPQLAEAHYNRGTLLGTMGRYDDELDA 180 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 Q + R A + + +L + + D + ++L + N Sbjct: 181 YRQAIALKPRFVR--AYVNLGVALRDLRRFD--EALLQFRKALSIDPN 224 >gi|172064642|ref|YP_001812292.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6] gi|171998127|gb|ACB69043.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MC40-6] Length = 611 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 49/161 (30%), Gaps = 4/161 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + A + +I + +L + D N+AQ YA +AL P+ Sbjct: 149 ALHLANRLPEARDAYLRCERIKPSYPQLRNNLSALHLQQEDYNAAQFYAKEALAEDPNNA 208 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + ++ E A L + A + A L A S ++ + Sbjct: 209 SAWSLLGSSHLKRAELDAAECALERALVLAP----HDARSLQAYSYICKERQRWSQAMEL 264 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 ++ +L A + Q + + E W+ Sbjct: 265 IEQANRLKPQDGSIQWSIAMLQLLQGQYEQGWRNHEARWRA 305 >gi|110597030|ref|ZP_01385319.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] gi|110341221|gb|EAT59686.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] Length = 654 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 22/262 (8%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + ++ A + +L A++ + + GDL A +AL+I P Sbjct: 7 RAYALHMKGRFEDAFALYQSVLSRNPLHFDALHLSGVIAAQTGDLLRAAELIKRALEIDP 66 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + AI ++ A R+L D + Sbjct: 67 RHINALNNLGYVLRGLGRMESAIEMHDRAL----LLESGHADHWYNRALALHDLARFEEA 122 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 ++L L + A +L + + +A E+ +NP + H Sbjct: 123 VGSFRQALSLKPDFADAWNMLGAALNALTRHEEALECYERSIALNP----STAAAHNNRG 178 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + L+R E L + AL G + + +A+ M + +E L Sbjct: 179 VALNDLERF----------AEGLRSCEQALALHAGDVTAWNNRAISLMGLDRHEEA---L 225 Query: 365 AQIEQANSHNTDKILYWTQSAL 386 A +A + + WT + Sbjct: 226 ASCMKAIALDQGSAEAWTLQGV 247 >gi|88792532|gb|ABD52285.1| polysaccharide deacetylase [Xanthomonas campestris pv. glycines] Length = 877 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 9/109 (8%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L K++ R RA L R L+ + + + E+LKL + +A+ Sbjct: 765 ATLVLPAAVKSSD---RQRAQLANERGLQLYKEKRYVDAAEQFDEALKLRPDFALAANNL 821 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGK 310 Q + ++ LE K++P +A + Y + + Sbjct: 822 GFVYYRQGRFAESARWLENTLKIDPSRAVAYLNLGDAYAKA-GDRDKAR 869 >gi|322709271|gb|EFZ00847.1| 20S cyclosome subunit (BimA/Nuc2/Cdc27), putative [Metarhizium anisopliae ARSEF 23] Length = 840 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 92/268 (34%), Gaps = 20/268 (7%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDIS 184 Q A Y A + M +R + ++ + R DL+ A + +D + Sbjct: 553 QAA-----YAEAEKFFRRMRVQAPSRLQDMEVYSTILWHLKRETDLS---FLAHELVDSA 604 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 +P A+ + LA++ +A+ + + ++ A + E+ + Sbjct: 605 WHSPQAWCALGNAWSLARDPEQALRCFKRATQLDPKF----AYAFTLQGHEHVTNEEYDK 660 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + +++ A + KA +NP+ + + Sbjct: 661 ALTAYRQAIAADRRHYNAYYGIGRVQERLGAYEKAYDHYYAAQTINPNNAVLICCMGGVL 720 Query: 305 ENT---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360 E V L + E+ + ++ ++ L +G I+ A + M+ +AP + Sbjct: 721 EKQKQMVQALHAYTKAAELAPRAAQTRYKKARALLTVGQIEAAQKELMILKDLAPDEATV 780 Query: 361 FLLLAQIEQANSHNTDKILYWT-QSALH 387 LL + ++ + + ++T AL Sbjct: 781 HFLLGTLYRSTNERQLAVRHFTIALALD 808 >gi|237708471|ref|ZP_04538952.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237723945|ref|ZP_04554426.1| TPR repeat-containing protein [Bacteroides sp. D4] gi|229437609|gb|EEO47686.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4] gi|229457400|gb|EEO63121.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 284 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 LNQK +++ +++NR L AR+ + + D E+ KL Sbjct: 178 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 237 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295 + + + +SQ KKR+A V EK ++ P PE+ Sbjct: 238 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 276 >gi|146328222|emb|CAM58138.1| hypothetical protein [uncultured marine microorganism] Length = 548 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 68/209 (32%), Gaps = 34/209 (16%) Query: 190 VTEAVVQQYVLAKEWSRA--ITFLNQKKKNAKEWNRNRAILLI--ARSLENADKGDMIAS 245 A V+ + ++W A + L +K + A+ L AR++ A G + S Sbjct: 337 AGAAPVRYAMERRDWEAAASLEPLEAAEKAGGNYEVRNAVALRYWARAVGAAKSGYIEQS 396 Query: 246 YHDAIESLKLCDNSIMASICAAK-------------SLISQNKKRKAEVILEKIWKVN-- 290 D IE +L A A+ +++++ +A ++ K+ Sbjct: 397 ERDLIELERLAKEMASAERVWARNTAEVFRLQATAWLALAKDESDRALELMRAAAKLESE 456 Query: 291 -------------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 H ++ ++ L L + + ++ A + Sbjct: 457 TDKSGLSPGRALPAHEQLGDMLAEL--GRPQAALAEYEASMSQAPRRFNTYLGAARAAND 514 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 G + A +++A + + LA+ Sbjct: 515 AGKPEIARDYYGKLLELASEESSRVELAE 543 >gi|110596792|ref|ZP_01385082.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] gi|110341479|gb|EAT59939.1| TPR repeat:Tetratricopeptide TPR_3:Tetratricopeptide TPR_4 [Chlorobium ferrooxidans DSM 13031] Length = 466 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 71/203 (34%), Gaps = 11/203 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A E L+ A+Y+L + D + A + ++I+ Sbjct: 245 RANVLAITGRIEEAAESYIKTLEQEPDDINALYNLGIAYEELEDYSEAVHCYRRCIEINS 304 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A+ + +E+ AI+ ++Q E L+ ++ + D+ S Sbjct: 305 EFTDAWFALACCHEALEEYEEAISAIDQALTALPESIE----FLLLKAEIEYNLNDLENS 360 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYT 300 E + + S + A L + L++ K+ P H EIA Y Sbjct: 361 ISTYREIIMIDPESPQIWVDFAMVLREAGDVNASIDALQQSLKLQPFSAEAHFEIAAAYF 420 Query: 301 HLLSENTVGKLKRALRLEEINKE 323 + + + LK + +I+ + Sbjct: 421 AM--GDKLSTLKALSKAFKIDPD 441 >gi|46579994|ref|YP_010802.1| TPR domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46449410|gb|AAS96061.1| TPR domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|311234007|gb|ADP86861.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio vulgaris RCH1] Length = 562 Score = 42.2 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GDL +A R A + + P+ E Q V A+ +++ + Sbjct: 359 EKGDLEAALRTAREGRETFPEQRDFREMEAQLLVNMGRSEEALRVIDKAADRWPD----D 414 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILE 284 + LL R+L D+G A++ E +K N A +L Q +A +LE Sbjct: 415 SGLLFMRALILDDRGAKDAAFAAMEEVIKASPNHAQALNYVGYTLAEQERDLTRAVSLLE 474 Query: 285 KIWKVNP-HP----EIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++P +P +A Y + RA+ L + E IA M Sbjct: 475 RANTLSPDNPFILDSLAWAYFKAGRIPEAWKAISRAIELNAPDPIIWEHY---GDIATAM 531 Query: 339 GSIDQAHAKAMLAMKIAP 356 G + A A+ + P Sbjct: 532 GQKNTARRAYRKALSMNP 549 Score = 36.8 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 30/241 (12%) Query: 155 FAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + L ES D A A A P + + Q V + + A Sbjct: 113 LGLTLLLAESYLDLDRNDEAIALLRAYNA--KHPKDDEARQELAQLLVKTRRYEEA---- 166 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 K + ++L + + + +++K + + A A Sbjct: 167 -DKLILSIGETSRTSLLRYYHARALMGLNRLTEATAQLRKAVKASPDFLEAWAELAYVYE 225 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIA------NIYTHLLSENTV--GKLKRALRLEEINKE 323 + +AE I E+ +A +++ L++ N +K L E Sbjct: 226 LRKNYVEAEKIYEQ--------ILALDEGNQDVWLRLVAINIKLNNPVKAYE-LARQGPE 276 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQANSHNTDKILYW 381 + ++ + + L+ +QA +LA+K +P +E++ LA + +TD L W Sbjct: 277 TFGFMLTAATLFLDDRFFEQA-EGLLLAVKDSPGAPEEVYFFLAVLAYEGQRDTDATLSW 335 Query: 382 T 382 Sbjct: 336 L 336 >gi|312880768|ref|ZP_07740568.1| serine/threonine protein kinase with TPR repeats [Aminomonas paucivorans DSM 12260] gi|310784059|gb|EFQ24457.1| serine/threonine protein kinase with TPR repeats [Aminomonas paucivorans DSM 12260] Length = 516 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 1/84 (1%) Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A + + G L + ++++I L D A +A A+ + Sbjct: 396 LARAQARWSAGDEAGALAILEEAVRSSPRDPSPHRMLARIHLARRRFDAAAQEARRALDL 455 Query: 355 APR-KEIFLLLAQIEQANSHNTDK 377 APR L AQ + N + Sbjct: 456 APRDAPALFLAAQAAEGQGRNEEA 479 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 4/93 (4%) Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A Q A + + A+ L + +++ +L + + + A+ +A + Sbjct: 397 ARAQARWSAGDEAGALAILEEAVRSSPRDPSPHRML----ARIHLARRRFDAAAQEARRA 452 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L L A AA++ Q + +A+ L++ Sbjct: 453 LDLAPRDAPALFLAAQAAEGQGRNEEAQSFLQE 485 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 4/123 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q + A LE ++ L ++A + A +ALD Sbjct: 395 LLARAQARWSAGDEAGALAILEEAVRSSPRDPSPHRMLARIHLARRRFDAAAQEARRALD 454 Query: 183 ISPDAPWVTEAVVQQYVLAKEW--SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 ++P + + A +FL + + +A+ R + + G Sbjct: 455 LAPR--DAPALFLAAQAAEGQGRNEEAQSFLQELLSRDATYPGAQALWERLRQGDPGETG 512 Query: 241 DMI 243 + + Sbjct: 513 NPL 515 >gi|303248555|ref|ZP_07334812.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio fructosovorans JJ] gi|302490085|gb|EFL50006.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfovibrio fructosovorans JJ] Length = 800 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 5/155 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 ARK + + H L+ L +++ ++++ A + + + P + Sbjct: 648 GENAAARKAFQKCLRANPGHIYSLLRL--GRMSEEDKRFTTALKYYKRAMAAPGGAPLTL 705 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + + G A+ + +AL P + + Y+ + AI ++ Sbjct: 706 RHLARLAFKRGRNEEAREHLHQALLHDPKDAVSLHLMAKLYLKEGQ-DPAIAEAMARQAV 764 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A R +AR+L +G + + Sbjct: 765 ALRPERTEFWQALARALT--AQGRDGEARDALARA 797 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 65/218 (29%), Gaps = 34/218 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + + ++ A A+Y+L R+G+ +A++ K L +P + Sbjct: 614 GRLDTARAEFDRVIGRDAKNTMALYNLGCVCRRLGENAAARKAFQKCLRANPGHIYSLLR 673 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + K ++ A+ + + + L + +G + ++L Sbjct: 674 LGRMSEEDKRFTTALKYYKRAMAAPGGAP----LTLRHLARLAFKRGRNEEAREHLHQAL 729 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 ++ AK + + + P IA Sbjct: 730 LHDPKDAVSLHLMAKLYLKEGQD----------------PAIAEAMA------------- 760 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + E E +++ G +A A Sbjct: 761 -RQAVALRPERTEFWQALARALTAQGRDGEARDALARA 797 >gi|121593320|ref|YP_985216.1| hypothetical protein Ajs_0898 [Acidovorax sp. JS42] gi|120605400|gb|ABM41140.1| TPR repeat-containing protein [Acidovorax sp. JS42] Length = 599 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 63/219 (28%), Gaps = 14/219 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQ---IALAE--RQYNIA 139 +AL + + +A K Y + E LL Q AL + + A Sbjct: 345 RALTQAYLM----HAQVAEKRGDYAGAEGWLSRIEDAAELLTAQSRRAALLARQGKLDEA 400 Query: 140 HEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + P + + A KA+ ++P + Sbjct: 401 RALIRAVPASTPDQERLKLQAEAQLLREAKQYAQAYTVLGKAVALAPADNDLAYDQAMLA 460 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A L +++ L + + + + +++L+ N Sbjct: 461 EKAGRLDDMERLLRAIIARQPDYHHALNALGFSLA---ERGVRLEEAKALIVKALEFAPN 517 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + +++A IL++ ++ P EIA Sbjct: 518 DPFITDSLGWVEFRLGNRQEALTILKRAYETQPDAEIAA 556 >gi|320103773|ref|YP_004179364.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319751055|gb|ADV62815.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 1626 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 20/276 (7%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLY 161 R + + ++T +N + V+ AL Q+ A + E + + + Sbjct: 292 RFAIAEAAVKNTLNNPTITRR-AVKAALDVGQFETASKLFEGIHKGSDNDAELLYFQGVL 350 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 S R L + A+ P A + I A Sbjct: 351 ASSQRR--LERSLELLNAAIAKDPGLLDAHAARLAVLASDPTTRGQIDEAVSAMLAANPG 408 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 RA L+ + + + + + + +L + A+ I N+ A Sbjct: 409 Q-ARAHLI---AHQIYRGINPDRAQIEIERAGELEPLHPEVVLTRAREAIKANQIASAIA 464 Query: 282 ILEKIWKVNPHPE-----IANIYT-HLLSENTVGKLKRALRLEEINKESVESL---VIVS 332 ++++ W V P + +A++Y E + L+RA++ + ESL +V+ Sbjct: 465 LIQQGWNVQPMDDRLPVLLASLYVSEGKPELAIDVLERAMKSLSFSIPIRESLADTYLVA 524 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQ 366 ++ A K+ + + + L+A+ Sbjct: 525 NRLDDLDKFLAAWPKSDNPLNESAKDYMKALALVAR 560 >gi|307168705|gb|EFN61737.1| Transmembrane and TPR repeat-containing protein CG4050 [Camponotus floridanus] Length = 980 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 27/240 (11%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ P+ Sbjct: 573 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 628 Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++Q+ A+ A L + + K+ N R + + D D ++ Sbjct: 629 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 684 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299 ++ L ++ A A L + + +A L + V HP+ + +IY Sbjct: 685 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 742 Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ + R R+ +++ +++ L + + +E G + A A +AP + Sbjct: 743 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLEHAAALAPHQ 800 >gi|197128015|gb|ACH44513.1| putative tetratricopeptide repeat domain 1 variant [Taeniopygia guttata] Length = 278 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 ++ A + + + ++RA+L R+ + A+ D ++++L + Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173 Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285 I A + A+ K +A +LEK Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKTVLEK 204 >gi|153012222|ref|YP_001381737.1| photosystem I assembly protein ycf3 [Medicago truncatula] Length = 163 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 5/103 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSA 173 E Y + A +E Y A E M P R + +Y++ G+ A Sbjct: 32 EKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKA 91 Query: 174 QRYATKALDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQK 214 Y +AL+ +P P AV+ Y+ + A ++ +Q Sbjct: 92 LEYYFRALERNPFLPQAFNNMAVICHYIRQGDSEIAESWFDQA 134 >gi|119629447|gb|EAX09042.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_c [Homo sapiens] Length = 612 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568 >gi|17511700|gb|AAH18707.1| TMTC4 protein [Homo sapiens] Length = 395 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 243 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 298 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 299 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 351 >gi|332706283|ref|ZP_08426351.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L] gi|332354988|gb|EGJ34460.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L] Length = 1611 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 20/121 (16%) Query: 159 SLYFESCR---IGDLNSAQRYATKALDISPDAPW---------VTEAVVQQ---YVLAKE 203 L + + GD+ A +A + + D + A ++Q + Sbjct: 1389 GLVKQGEKLAKEGDVEGAIAKFKEAQEWNSDLEFDPEKKAKQLAARAKLEQGDKLAEEGD 1448 Query: 204 WSRAITFLNQKKKNAKEWN-----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 AI + ++ + + RAI + + + A KG + + ++ KL N Sbjct: 1449 VDGAIAKFKKAQEWNSDLEFDPEEKARAIAKVKQGEQLARKGQLTKALSLYKQAQKLDPN 1508 Query: 259 S 259 Sbjct: 1509 L 1509 >gi|325928005|ref|ZP_08189223.1| tetratricopeptide repeat protein [Xanthomonas perforans 91-118] gi|325541619|gb|EGD13143.1| tetratricopeptide repeat protein [Xanthomonas perforans 91-118] Length = 412 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + +LY + L A+ Sbjct: 163 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQVSEARLRTASALYELGRKPEALAEARALQGD 222 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 223 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 278 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 279 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 338 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 339 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 394 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 395 RLDPDNRAL 403 >gi|300718975|ref|YP_003743778.1| cellulose synthase operon protein C [Erwinia billingiae Eb661] gi|299064811|emb|CAX61931.1| cellulose synthase operon protein C [Erwinia billingiae Eb661] Length = 1269 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 76/245 (31%), Gaps = 30/245 (12%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA 139 + G G ++ + ++ A+ + V Q + + L L +A Y A Sbjct: 263 RKNAGGAEKGQGFTALNSGDVSGAQSAFNQVLQANPEDADALAGL--GYVAQRNGNYAAA 320 Query: 140 HEKL------------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDIS 184 + L + M Q R +A + ++ + G+ A + +A Sbjct: 321 ADYLDRAAKQGGENSQQRMTQAADARFYAQLATAQQAMKAGNTAQALSLSEPLTQADGEK 380 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + + A + + A + + NR L + + Sbjct: 381 GVSAKLFRA--DVQRRSNQLDAAEQT-YRSVIQSDPDNRPAKEGLFYVLRQQNRGAEANT 437 Query: 245 SYHDAIESLKLCDNSIMASI-----CAAKSLISQNKKRKAEVILEKIWKVNPH-P----E 294 ES++ A AK ++ ++A IL++ + P P + Sbjct: 438 LLSSLPESVRESVTPKPAVTSDPVRRQAKQALAAGNTQQAIAILQQGTQRFPTDPWLRLD 497 Query: 295 IANIY 299 +A IY Sbjct: 498 LARIY 502 Score = 37.2 bits (85), Expect = 6.8, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++A+H++P A+ + + + + T LL ++A A+ + A L+ Sbjct: 757 VALASHDLPKAKGLVAGLRGEQTPER----LLLMARVAEADGDHQQALAY----LRTARG 808 Query: 153 REFAVYS 159 + + Sbjct: 809 KMIGLEG 815 >gi|171685644|ref|XP_001907763.1| hypothetical protein [Podospora anserina S mat+] gi|170942783|emb|CAP68436.1| unnamed protein product [Podospora anserina S mat+] Length = 815 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 82/247 (33%), Gaps = 21/247 (8%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYAT 178 L + Q A Y A + + + TR VYS R S A Sbjct: 524 LARMGRAQYEQA--NYAEAEKLFRRLRMLAPTRHEDMEVYSTVLWHLRKETDLS--FLAH 579 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + +D D+P+ A+ + LA + +A+ + + ++ A + E+ + Sbjct: 580 ELVDAVWDSPYAWCALGNAWSLACDHEQALRCFKRAIQLHPKF----AYAYTLQGHEHVE 635 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 + + +++ A K KA + + HP+ A + Sbjct: 636 NEEYDKALTAYRQAISADKRHYNAYYGIGKVFEKLGNWDKALSHYKAALVI--HPDHAVL 693 Query: 299 YTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + + K+ R E+ + E ++ + G ++A + ++ Sbjct: 694 ICCV--GTVLQRQKQIGQALPYFSRAVELAPRAPEIRHKKARALMATGQFEEAQQELLVL 751 Query: 352 MKIAPRK 358 +AP K Sbjct: 752 RDLAPDK 758 >gi|60219539|emb|CAI56780.1| hypothetical protein [Homo sapiens] Length = 430 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 14/193 (7%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 28 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 87 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKESV 325 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 88 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKH- 146 Query: 326 ESLVIVSKIALEMGS------IDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKI 378 + + A+ M +A + + + P + L + + + + Sbjct: 147 --KLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-A 203 Query: 379 LYWTQSALHAMPD 391 W + A+ D Sbjct: 204 EIWMKKAIKLQAD 216 >gi|33862553|ref|NP_894113.1| SAM-binding motif-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33640666|emb|CAE20455.1| SAM (and some other nucleotide) binding motif:TPR repeat [Prochlorococcus marinus str. MIT 9313] Length = 774 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 67/203 (33%), Gaps = 22/203 (10%) Query: 133 ERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + N A + + L P + G+++ A +++ + P Sbjct: 37 QGNINEAQKAYQEFINSGLSDPDV----FSNFALICQSQGEIDKAINIYKRSIKLFPRHA 92 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + A + + + A N A L +KG + + Sbjct: 93 FSH-ANLGYLFFQ---IGMLDDAEAAIRQAIVIQPNLANAYSYLGLVLREKGRLTDAEDI 148 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305 ++++L + + A + + L +Q K +AE + ++ + A+IY +L Sbjct: 149 TRKAIELQPDLVDAYVNLGQILQNQGKLDEAEHTTRQAIELQD--DSASIYLNLGGILQD 206 Query: 306 -----NTVGKLKRALRLEEINKE 323 + ++A+ L+ + Sbjct: 207 QGDLTDAEANTRKAMHLQADLPD 229 >gi|224058285|ref|XP_002194126.1| PREDICTED: similar to tetratricopeptide repeat domain 4 [Taeniopygia guttata] Length = 330 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 6/123 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G+ SA A +A + P +Y K++ RA+ ++ + Sbjct: 1 MALGNYRSALNDAIQAKKLKPTHLKA-IIRGNEYFKEKDYGRAVAAYSEGLRRRCGDAGL 59 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A+LL R+ + G+ ++ +DAI++ KL + A I A + +A Sbjct: 60 DAVLLTNRAAAHFHLGNYRSALNDAIQAKKLKPTHLKAIIRGALCHMELKNFVEAI---- 115 Query: 285 KIW 287 W Sbjct: 116 -AW 117 >gi|220906314|ref|YP_002481625.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219862925|gb|ACL43264.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 331 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 30/192 (15%) Query: 81 YDKGYKALYT----------GLM-----SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL 125 +KGY+A+ GL+ + A + + + +L Sbjct: 92 QEKGYQAVLQREPDNVTALEGLVNTRLEMVQAGYAKIPTVIEPLEKLAKAKPDRTDYLVL 151 Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY--------A 177 Q A + + +L A+ + + +A A Sbjct: 152 LGQAQQYVGNREAAAQAFQNVLATKPGDIKALQGMASLLLQEQRPEAAIALLQDTIDKKA 211 Query: 178 TKALDISPDAPW--VTEAVV-QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KA I P + + ++ + Y + + AI +Q K K+ N R ++ A+++ Sbjct: 212 IKANQIQPGSVDITAVQLLLGELYTNLRRYDEAIALFDQLIK--KDKNDFRPVV--AKAM 267 Query: 235 ENADKGDMIASY 246 +G + Sbjct: 268 VFTQQGKTEEAK 279 >gi|330951106|gb|EGH51366.1| TPR repeat-containing protein [Pseudomonas syringae Cit 7] Length = 519 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 73/227 (32%), Gaps = 38/227 (16%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 Y + +G SA A +P A Q A + ++ ++ + + + Sbjct: 36 YQIAEYMGADQSALDTALIWARNAPGNLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGD 95 Query: 221 WN----RNRAI--------------------------LLIARSLENADKGDMIASYHDAI 250 + A+ L+ ++L GD S + Sbjct: 96 THFDFLALSAVETDPDTRNGLLKSFDRLLGKYPNNGQLIFGKALLLQQNGDSEQSLKL-L 154 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENT 307 E + I + A+ L S N+ ++A +LEK K +P+ + Y +L E Sbjct: 155 EDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQN 212 Query: 308 V--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + L + + E ++ + LE + D+A + Sbjct: 213 RMEDAKVQFAALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 259 >gi|329894006|ref|ZP_08270014.1| TPR domain protein [gamma proteobacterium IMCC3088] gi|328923349|gb|EGG30668.1| TPR domain protein [gamma proteobacterium IMCC3088] Length = 668 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 80/289 (27%), Gaps = 60/289 (20%) Query: 54 AWILLFAVSRFFLSCPAMLFH---------MLHKRNYDKGYKALYTGLMSIAAHNIPLA- 103 AW L R+ A + + G+ L G + A + A Sbjct: 47 AWYFLAVCQRYTQQAEAASRSLQQCLDIDPSFGRAYQEYGHLHLAQGRVQEAIGSYLDAV 106 Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ---YNIAHEKLEMMLQIPATREFAVYSL 160 R+ S VS L+ L A A E+ + +P V + Sbjct: 107 RRNDSLVSAWR-----QLIDL-----ATKIGDLNLRKDAEEQYRRLSALPG-ALLGVRNF 155 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA------------- 207 E G L A+ L +P + V A Sbjct: 156 LAE----GKLLKAESLCRTFLKQNPKHVEGMRLLADIGVKLSILDDAEFLLESALVFEPE 211 Query: 208 --------ITFLNQKKKNAKEWNRNRAILL---------IARSLENADKGDMIASYHDAI 250 I L+Q++K A+ + + +L + + + G + Sbjct: 212 NPFARFDYINVLHQRQKYAQSLEQAQTLLAQEPSNDRYRTSVANQLVAVGRFEEALDVYD 271 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + NS + +L + + +A K +K + PE + Y Sbjct: 272 DIAMRVPNSAPLQLLRGHALKTIGRIDEAIEAYRKAYKAS--PEFGDAY 318 >gi|326387782|ref|ZP_08209388.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326207828|gb|EGD58639.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 663 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 17/167 (10%) Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPE---- 294 GD + L S+ + AKSL S + AE ++ + HPE Sbjct: 113 GDQAGAALAERHGAHLA--SLPPPVLRAKSLFSDGEMDAAERMIRDFLLAHGDHPEAMRL 170 Query: 295 IANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 +A I + + ++ L L + ++ + + +A ++ Sbjct: 171 LAQIGFVRGVHDDAELLFAGVLALV---PDHHDARGEYVQTLIARHKFSEARKALAPLLE 227 Query: 354 IAPRKEIFLLLAQ-IEQANSHNTDKILYWTQSALHAMPDPLWISDDG 399 P + A I N I A+ A P DDG Sbjct: 228 RDPANHAHRIQAATIAVGLGENDAAIN--LYRAMLADLVPT---DDG 269 >gi|257455108|ref|ZP_05620346.1| tetratricopeptide TPR_2 [Enhydrobacter aerosaccus SK60] gi|257447441|gb|EEV22446.1| tetratricopeptide TPR_2 [Enhydrobacter aerosaccus SK60] Length = 627 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 74/199 (37%), Gaps = 10/199 (5%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN-ADKGDMIASYHDAIESLK 254 + +A+ Q+ A + R+L S A + Sbjct: 124 EFAADRGRIDQALATYKQQ------SFLADAAPVFERALGLSLQNEPPQLSLAFANAWQQ 177 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + + A + ++ A L +I + +P +++ I + T + + Sbjct: 178 QNPDHVPAIFYVTHLALKAHEYELAGEKLNQILQYDPDADLSQILIGIYPTETRDQAELL 237 Query: 315 LRLEEINKESVESLVIV-SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANS 372 L ++ ++ SL+++ + + L+ A A+K P+ FL+L A I QA S Sbjct: 238 ATLNRLDIKNNPSLLVMKAGLLLQFQQPKAALVAINRALKTNPKSPAFLILKADILQALS 297 Query: 373 HNTDKILYWTQSALHAMPD 391 +++++ + A +PD Sbjct: 298 -PSNQVIAFIAQARKTVPD 315 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 2/124 (1%) Query: 263 SICAAKSLISQNKKRKAEVILEK-IWKVNPHPEIANIY-THLLSENTVGKLKRALRLEEI 320 +I A+ + + +A ++ + + P L +E L A ++ Sbjct: 119 AILMAEFAADRGRIDQALATYKQQSFLADAAPVFERALGLSLQNEPPQLSLAFANAWQQQ 178 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 N + V ++ V+ +AL+ + A K ++ P ++ +L I + + ++L Sbjct: 179 NPDHVPAIFYVTHLALKAHEYELAGEKLNQILQYDPDADLSQILIGIYPTETRDQAELLA 238 Query: 381 WTQS 384 Sbjct: 239 TLNR 242 >gi|222612526|gb|EEE50658.1| hypothetical protein OsJ_30888 [Oryza sativa Japonica Group] Length = 869 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM----LQIPAT 152 A AR+++ + + + VY + ++ A + E M +Q Sbjct: 402 AGQADRAREVYKMLQEYNIKGTPE-VYTIALRSCSLTGDLGFALKIYEDMNKIGVQPDEM 460 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW-VTEAVVQQYVLAKEWSRAITFL 211 A+ + + R ++A A +++ AK+W +A+ Sbjct: 461 FLSALVDVAGHARRA---DAAFEIMKDARAKGYQVGTIAYSSLMGACCNAKDWKKALQLF 517 Query: 212 NQ 213 + Sbjct: 518 EE 519 >gi|254483058|ref|ZP_05096293.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] gi|214036743|gb|EEB77415.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 581 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 80/233 (34%), Gaps = 31/233 (13%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + P + A L + D SA Y +ALD + + +++ Sbjct: 57 EDPYAKSSAGRFLARHYVQQKDYASAIAYYEEALDAAGLSGVANREMLR----------- 105 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + + N + A +++ R+L+ D A ++ + + A + A Sbjct: 106 ----ELAQVYLLDSNHSLAAVVLQRALDIDLVPDARDFLLLA-QAHYRMGDYV-AVVVAL 159 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 + + K + + + H +A Y E LK +L ++ ++ E+ Sbjct: 160 DGIQANGLKLEVQQL---------HQALALYYRAGAYEQCENILK---QLLKVEVDNPEN 207 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIA-P-RKEIFLLLAQIEQANSHNTDKI 378 ++ + L+ QA LA + P + LLL ++ + + Sbjct: 208 WHQLASVYLQQNKQKQALDHLNLAFEKRVPFAESELLLLVDLQAVSGNPYGAA 260 >gi|148262284|ref|YP_001228990.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146395784|gb|ABQ24417.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 275 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 12/163 (7%) Query: 102 LARKMHSYVSQQHTFHNEYLV----YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 LA+K ++ + L LL++ + E +A K + M Q P Sbjct: 102 LAQKPADDLALLKEDTDRRLTAMEERLLKLDKSFEELHKTLAEAKNKEMEQAPD--ALYQ 159 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQK 214 L ++ + GD A+ Y TK +++ P A + Y K++ +AI + Sbjct: 160 RGL--DTLKGGDPQKAREYFTKFIELFPKHELTANARYWLGETYYHEKKYDQAILEFQEV 217 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 KN + A +L +++ + GD ++ + + ++ Sbjct: 218 IKNYPGKEKVPAAML-KQAMAFKELGDAKSARYVYKKLIEDSP 259 >gi|94987433|ref|YP_595366.1| GluNAc transferase [Lawsonia intracellularis PHE/MN1-00] gi|94731682|emb|CAJ55045.1| GluNAc transferase [Lawsonia intracellularis PHE/MN1-00] Length = 275 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 12/182 (6%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFE 163 + E L E Q L + A E + + + Sbjct: 104 AAKEALKDFETRRERLFN--EGQKQLEKGNILEAREAFSKLAKEFKDDPELMGQIGKMYL 161 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 A Y AL I+P+ ++ + ++ A + + K + Sbjct: 162 KYEY--YEDAIIYLETALTINPELAYLYNYIGIALRKVGKFDIAEKYYLRASK----YLG 215 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L D GD + A +LK+ + + A + + K + + V+ Sbjct: 216 KDPNLFFNLGRLYIDWGDWEKAIVSASAALKVRPDFMEAKKL--RKYAERMKHKNSSVLF 273 Query: 284 EK 285 E+ Sbjct: 274 EE 275 >gi|8050853|gb|AAF71779.1|AF263912_18 NysRII [Streptomyces noursei ATCC 11455] Length = 953 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 88/309 (28%), Gaps = 42/309 (13%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA- 151 ++ A + ARK+ + + L A + A L+ ML Sbjct: 555 LATAGEDADKARKLARIALTGGVNESLMMPKLAACAALFATDDNDEAVHGLDTMLTAARS 614 Query: 152 -------TREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV---- 199 R F + + ++ + R+ A +AL P W A+ Sbjct: 615 AHLRSMAARIFNLRARIHLCAARLEAAERDLDSAERAL---PPTSWHPRALPNLIATRIL 671 Query: 200 ---LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK-- 254 RA E LL+AR+ AD GD + + E + Sbjct: 672 VSMETGRPDRARRLAEAPVPAGGEEGVWWPALLLARARVAADDGDWEEALRLSRECGRWL 731 Query: 255 -----LCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYTHLL 303 + AA++ + +A + ++ W IA + T L Sbjct: 732 FRRHWANPAMLSWRPLAAEACLKLGDVTEARRLRDEELFFADRWGTASARGIARLTTRRL 791 Query: 304 SENTVGK-LKRALRLEEINKESVE------SLVIVSKIALEMGSIDQAHAKAMLAMKI-- 354 ++ + ++R + ++S S + + G A ++ Sbjct: 792 FDDDGDRAVRRIREAAALLRDSPARLAYLWSRLSQAGAETAHGDTAAAARSWQAVARMTA 851 Query: 355 -APRKEIFL 362 P + Sbjct: 852 AHPASRLAT 860 >gi|297180994|gb|ADI17196.1| FOG: tpr repeat-protein [uncultured Rhodobacterales bacterium HF0070_10D05] Length = 734 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 10/170 (5%) Query: 132 AERQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + + L + + P E + L + D SA A + P Sbjct: 242 ANGDFGKSLRYLNKAIELNPDYAEALINRGLISLAQ--EDKASALTDLENAHKLKPHINQ 299 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + ++ + AK++ I K + L + +L + + + Sbjct: 300 IWHPILTLKMEAKDFEHTIALAEGMVKLDPMDEK----LFASMALSHQHLKNYDDAVVFY 355 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 +++ + + A +L Q K +A K + P+ A Y Sbjct: 356 NKAISIKPDYATAYNNMGNALKDQGKLDEAIEAFNKALCIK--PDYATAY 403 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 15/182 (8%) Query: 86 KAL-YTGLMSIAAHNIPLARKMHSYVSQQH----TFHNEYLVYLLEVQIALAERQYNIAH 140 +AL GL+S+A + A + + L +E + + Sbjct: 265 EALINRGLISLAQEDKASALTDLENAHKLKPHINQIWHPILTLKMEA------KDFEHTI 318 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 E M+++ E S+ + + + A + KA+ I PD + Sbjct: 319 ALAEGMVKLDPMDEKLFASMALSHQHLKNYDDAVVFYNKAISIKPDYATAYNNMGNALKD 378 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + AI N+ ++ A D+G + + ++L + + Sbjct: 379 QGKLDEAIEAFNKALCIKPDY----ATAYNNMGNALKDQGKLDEAIEAFNKALCIKPDYA 434 Query: 261 MA 262 A Sbjct: 435 TA 436 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 13/107 (12%) Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 TR + +N A A K + PD + ++ +++ + Sbjct: 202 ETRLL---------LKQKKVNEALAVAEKTNKLFPDDVEGMGILGSCLRANGDFGKSLRY 252 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 LN+ + ++ A LI R L + + D ++ D + KL Sbjct: 253 LNKAIELNPDY----AEALINRGLISLAQEDKASALTDLENAHKLKP 295 Score = 37.6 bits (86), Expect = 5.3, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 47/136 (34%), Gaps = 8/136 (5%) Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + + + A ++ KL + + L + K+ L K ++N P+ Sbjct: 206 LLKQKKVNEALAVAEKTNKLFPDDVEGMGILGSCLRANGDFGKSLRYLNKAIELN--PDY 263 Query: 296 ANIYTH-----LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 A + L E+ L ++ + + + +E + A A Sbjct: 264 AEALINRGLISLAQEDKASALTDLENAHKLKPHINQIWHPILTLKMEAKDFEHTIALAEG 323 Query: 351 AMKIAP-RKEIFLLLA 365 +K+ P +++F +A Sbjct: 324 MVKLDPMDEKLFASMA 339 >gi|289207527|ref|YP_003459593.1| hypothetical protein TK90_0342 [Thioalkalivibrio sp. K90mix] gi|288943158|gb|ADC70857.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp. K90mix] Length = 582 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 78/239 (32%), Gaps = 24/239 (10%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 E A + E + + + + + I ++A+ + PD Sbjct: 343 EMEDDPEGARQAYERVGGGGHADDARLRA-ARMTLEIEGESAARERFEQM-QQGPDTELA 400 Query: 191 TEAVVQ---QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 A V E++ A LN+ R LL R L + + D+ A+ Sbjct: 401 RRAYVGEANLLREKGEYTAARERLNRGLVQFPGDTR----LLYMRGLVHERQDDIEAAEA 456 Query: 248 DAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN--------I 298 D L ++ A + ++ +A ++E+ + P+ A + Sbjct: 457 DFRAILDNDPENVAALNALGYTLADRTDRYEEALDLIERAYAQE--PDDAAIIDSYGWVL 514 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + L+RA L + E ++ + E G D+A + A++ P Sbjct: 515 YRLGRLDEAEDFLRRAYDL----SDDGEIASNLAVVLWERGERDEARSILEAALEREPD 569 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 99/279 (35%), Gaps = 25/279 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G +++ + A + + + ++ + +IAL R N A + E Q+ Sbjct: 67 GEIAVRSGQYEEAARYYGAAA---LLSDDPAIAERATRIALFARDRNQALQSSERWRQLA 123 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDIS------PDAPWVTEAVVQQYVLAKEW 204 A+ +G + A +D+ P A AVV Q + Sbjct: 124 PESLDALQLSTVLRLDLGQPDPAAEQMGTVIDLQAVQGGDPYA--ALGAVVGQTHNREAA 181 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A+ L ++++ +R + A + GD + ++ S+ + Sbjct: 182 LEALEKLTDQRQDDVGVHR-----VFAEAALRFAPGDP--ALEATARGVERFPESVSLRL 234 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSENTVGKLKRAL--RLEE 319 A++L + +A L V HPE Y +L+E+ ++ R RL E Sbjct: 235 LRARALDEAGQSDEALEELRAT--VANHPESREARFGYARMLAEHDDREMAREEMDRLVE 292 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + E V+ L+ ++ + LE + A + R+ Sbjct: 293 QDPEDVQLLLALALMNLEAEQLGPARTYLERLDALGERE 331 >gi|198276654|ref|ZP_03209185.1| hypothetical protein BACPLE_02850 [Bacteroides plebeius DSM 17135] gi|198270179|gb|EDY94449.1| hypothetical protein BACPLE_02850 [Bacteroides plebeius DSM 17135] Length = 366 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 7/202 (3%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+ + +P A K E L L + A L+ ++ Sbjct: 81 DGIRARNMGKLPYAIKCFEEAVA---LQEEKETLGLLASAYLQANRTEDARITLDRLIAK 137 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 T A+ SL D + KA+ + + K +AI Sbjct: 138 DETNVQALLSLASVCYIQEDYEGMDKACQKAIALDEKNAQAYYLAARAARGLKNDLQAIV 197 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + + + A LL R+ + + +D + LKL A + A Sbjct: 198 MLTKAIVQNESFT--EAYLL--RAEVLWEMRQAKDALNDLEQVLKLNPEEEEALLLKATI 253 Query: 270 LISQNKKRKAEVILEKIWKVNP 291 I + ++ E +E++ +NP Sbjct: 254 HIGMGENQEGEACVEQVIALNP 275 >gi|162454874|ref|YP_001617241.1| hypothetical protein sce6592 [Sorangium cellulosum 'So ce 56'] gi|161165456|emb|CAN96761.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 4053 Score = 42.2 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 56/198 (28%), Gaps = 19/198 (9%) Query: 95 IAAHNIPLARKMHSYV---SQQHTFHNEYLVYLLEVQ------IALAERQYNIAHEKLEM 145 +AA AR + Q E L YL AL A E Sbjct: 2643 LAAGEADRARAALERALPRAAQPAPLRERLAYLYRASGAWSALAALIAGDAARADEAPAR 2702 Query: 146 M-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + L A + G +A +A+ ++PD + A + A Sbjct: 2703 LSLLREAADLYLTRG--------GSPAAAIPLFDEAIALAPDDLSLRLARSRALSAAGRA 2754 Query: 205 SRAITFLNQKKKN-AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A L + + RA++ + GD + + +L++ A Sbjct: 2755 DDATAALRGIIADFGTRRPKERALVHYELARVALATGDRARAMAEFDLALRVDPAHPDAL 2814 Query: 264 ICAAKSLISQNKKRKAEV 281 A + + +A Sbjct: 2815 HGLAGLALEDGQLERAHR 2832 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 82/264 (31%), Gaps = 15/264 (5%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 + ++ AR + + L L + + +++ A ++ + Sbjct: 3724 ARSGDVERARAHLGDLLHADSKDRAALKAL--AGLEESAARWDAASAVYRRLIALEEGDA 3781 Query: 155 FAVYSLYFES--CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-AITFL 211 +L R G L A+ +AL +P P + + + Y A L Sbjct: 3782 LVATALLLAGTCARAGHLGDARGGLERALRAAPGNPEIRDRLRALYAEIGANRELAAITL 3841 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + R LL+A D GD + E+ L ++ +LI Sbjct: 3842 EDAAAASDVAGRF--TLLVAAGRLLLDVGDAAQAAAALREARSLRPEDNEVALLLVDALI 3899 Query: 272 SQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTV-----GKLKRALRLEEINKE 323 + R+A + L K + +Y + L R E + + Sbjct: 3900 AAGDSREARAVTAELIVAAKGRRSRHLGAVYHRVARIEDAEGNLHESLTALTRALENDPQ 3959 Query: 324 SVESLVIVSKIALEMGSIDQAHAK 347 + E + + + AL +G D A Sbjct: 3960 NGEIAMELGESALGLGEEDIAARA 3983 Score = 38.0 bits (87), Expect = 4.1, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 75/210 (35%), Gaps = 12/210 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G+ + A+ +AL + + E + Y + WS + A Sbjct: 2638 LADAYLAAGEADRARAALERALPRAAQPAPLRERLAYLYRASGAWSALAALIAGDAARAD 2697 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E ++L A L G A+ E++ L + + + +++L + + A Sbjct: 2698 EAPARLSLLREAADLYLTRGGSPAAAIPLFDEAIALAPDDLSLRLARSRALSAAGRADDA 2757 Query: 280 EVILEKIW----------KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 L I + H E+A + L + + + ++ ++L Sbjct: 2758 TAALRGIIADFGTRRPKERALVHYELARV--ALATGDRARAMAEFDLALRVDPAHPDALH 2815 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 ++ +ALE G +++AH + +A R Sbjct: 2816 GLAGLALEDGQLERAHRAYRALLLVARRPR 2845 >gi|108805943|ref|YP_645880.1| tetratricopeptide repeat-containing protein [Rubrobacter xylanophilus DSM 9941] gi|108767186|gb|ABG06068.1| Tetratricopeptide TPR_2 [Rubrobacter xylanophilus DSM 9941] Length = 444 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 59/166 (35%), Gaps = 3/166 (1%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 LI + A +G + + ++L+ + ++L+ + +AE + Sbjct: 6 LIEQGEALASEGLVEEALERFEQALQRAPDDPEVVEAVGRALLGLGRLEEAEASFLDALE 65 Query: 289 VNP---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 ++P P + + + + R E + E ++ V + + MG A Sbjct: 66 MDPGWVAPRMGLAMVAMRRDEPFKIVHHLERAIEADPEQPDAYVELGRYYGLMGEPLLAR 125 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + P L+ A + ++ + L + + A+ A D Sbjct: 126 ATFERWLARHPDDADMLINAGLTLFDAGDYGPALEFFERAVEAAED 171 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 7/143 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 +A + A M +Y +L + + A + L+ + Sbjct: 290 LANGDEEGA--MDAYRRVLELDPENPEAHLELGILHDRRGERQRAEKHFLESLKADPSNP 347 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+YS G+L +A+ +AL P A+ E++ ++ +L + Sbjct: 348 RALYSYANVYYTSGELETAEELLARALAADPGYSPALSALASIRARRGEYAASLEYLEKA 407 Query: 215 KKNAKEWNRNRAILLIARSLENA 237 + R + R+LE A Sbjct: 408 VEAG-----ERDVEHFKRALEFA 425 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 50/177 (28%), Gaps = 21/177 (11%) Query: 157 VYSLYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + LY GD A + L++ P+ P + + E RA + Sbjct: 279 IRHLYTLGEARLANGDEEGAMDAYRRVLELDPENPEAHLELGILHDRRGERQRAEKHFLE 338 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K R L + + G++ + +L A A + Sbjct: 339 SLKADPSNPR----ALYSYANVYYTSGELETAEELLARALAADPGYSPALSALASIRARR 394 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + + LEK + E V KRAL + ++ ++ Sbjct: 395 GEYAASLEYLEKAVEA--------------GERDVEHFKRALEFAPLRQDPRFRRLL 437 >gi|299535697|ref|ZP_07049018.1| hypothetical protein BFZC1_06728 [Lysinibacillus fusiformis ZC1] gi|298728897|gb|EFI69451.1| hypothetical protein BFZC1_06728 [Lysinibacillus fusiformis ZC1] Length = 219 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A E++Y A + ++ + + D A+R+ KA+ + A Sbjct: 10 AFQEKRYEDAAQLFTKAIEAEPENAIGYVNFGNLLAVLEDTERAERFFQKAITVDESAAT 69 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y A+ ++ A+ Q K+ E A + + + Sbjct: 70 AYYGLANLYYNAERYAEAVKLYEQALKHHIEG----ADVYYMMGKCFERMDNSKLALPYL 125 Query: 250 IESLKLCDN-----SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLL 303 ++++ A + A + + K ++ ++++E+ W + H + +Y + Sbjct: 126 QRAVEIAPEDTQIRLAYAIVLCALEMFEEGK-KELDLLIEQDWNNADAHYNLGVLYA-VS 183 Query: 304 SENTVGKLKRALRLEEINKESVESLVI 330 +E T + + + E ++ I Sbjct: 184 TEQTEDAMYHLKQAFTLQPEYDQARYI 210 >gi|255711458|ref|XP_002552012.1| KLTH0B05170p [Lachancea thermotolerans] gi|238933390|emb|CAR21574.1| KLTH0B05170p [Lachancea thermotolerans] Length = 593 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 11/202 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q+ +Q+ A + E ++ + F L + R G + ++ ++A P Sbjct: 379 RGQMYFITQQFEQAGKDFEKAKELSESNIFPYIQLACLTYREGKFDDSETLFSEARRKFP 438 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDM- 242 AP V + + + A + K ++A + LI ++ + + + Sbjct: 439 TAPEVPNFYAETLSDKGDLAGARKQYDIAAKLEDALDGIHVGVSPLIGKATLLSREPSVE 498 Query: 243 --IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + ++ + S A I A+ + Q +A + E+ ++A + Sbjct: 499 NFVEATQLFEKACQNDPRSEQAKIGLAQLKLQQEDIDEAIALFEEA------ADLARSFD 552 Query: 301 HLLSENTVGKLKRALRLEEINK 322 L T + + + + Sbjct: 553 EKLQATTFAEATKIQKKIRADP 574 Score = 38.4 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 15/146 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAER-----QYNIAHEKLEMMLQIP 150 ++ ARK + ++ + V + L + L R + A + E Q Sbjct: 455 GDLAGARKQYDIAAKLEDALDGIHVGVSPLIGKATLLSREPSVENFVEATQLFEKACQND 514 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 E A L + D++ A +A D++ + + A ++ A Sbjct: 515 PRSEQAKIGLAQLKLQQEDIDEAIALFEEAADLARS--------FDEKLQATTFAEATKI 566 Query: 211 LNQKKKNAKEWNRNRAILLIARSLEN 236 + + + + L R+ Sbjct: 567 QKKIRADPVVSAKIEETLAAYRAQGM 592 >gi|225873213|ref|YP_002754672.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] gi|225792497|gb|ACO32587.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] Length = 348 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 86/232 (37%), Gaps = 16/232 (6%) Query: 133 ERQYNIAHEKLE-MMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A E E + Q P + L R+G +A Y KA P A Sbjct: 81 TGRLPQAKEAFEKAIAQNPKDIESVQLEGLTL--FRMGQPKAAIPYLEKAKQWMPTANAD 138 Query: 191 TEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 V+ Y+ A+++ A + + A L++A+ L ++ D A+ +A Sbjct: 139 ASHVLGLCYMNAQQFDDARRAF--AAEYDLPPDSAAAHLILAQMLMLSNLTDQGAA--EA 194 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-P----EIANIYTHLLS 304 ++L L MA + + +++ +A L+ K+NP P + + Y + Sbjct: 195 QKALALQPGLPMAHFLIGEVDLFKSQVDEAVQQLQAEQKINPTYPPVYSRLGDAYFRIGK 254 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + L ++ S +++ K+ L + A A ++ P Sbjct: 255 YDQAEQ-ALLKSLA-LSTSSTGPFILMGKVLLRKQDPETAAMYLRHAEQMDP 304 >gi|255567975|ref|XP_002524965.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis] gi|223535800|gb|EEF37462.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis] Length = 1101 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 8/150 (5%) Query: 133 ERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 E +Y A + +L T R L +A +KA+ +P A Sbjct: 359 EGKYASAISIFDQILTEDPTYPEALIGRGTAHAFQRE--LEAAIADFSKAIQSNPLAGEA 416 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + Q E AI L + E+ N A +L R + N D A+ D Sbjct: 417 WKRRGQARAALGESIEAIHDLTKAL----EFEPNSADILHERGIVNFKFKDFDAAVQDLS 472 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +KL ++ A +L S + +KAE Sbjct: 473 ACVKLDKDNKSAYTYLGLALSSTGEYKKAE 502 >gi|158522430|ref|YP_001530300.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511256|gb|ABW68223.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 792 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 13/230 (5%) Query: 137 NIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 + A + + P T Y+L R DL +A R+ ALD++P Sbjct: 510 DQAEPFFQKALTLAPETEAV-HYNLGLVRFRQTDLAAAWRHVNSALDLNPGYDLALNLAG 568 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++ +A+ + A + +GD + +L+ Sbjct: 569 SLHMACGNTGQAVALYRKALAITPLS----AETFNNLGIALHRQGDSGQAMTFFRRALER 624 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HP----EIANIYTHLLSENTVGK 310 A+ K + A LE+ +P P ++ +Y + ++ Sbjct: 625 NPGFADAASNLEKIEAALETYGLAIRALEQAVAASPGDPARLFQLGRLYAAVGMQDKA-- 682 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L + + + L + + ++ I +A ++AP + Sbjct: 683 LAAYEKTIVLKPDDAACLNALGTLYADICDIQKAITCFEKLARLAPDNAV 732 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 56/193 (29%), Gaps = 11/193 (5%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ A KAL I+P + + + +A+TF + + + Sbjct: 572 MACGNTGQAVALYRKALAITPLSAETFNNLGIALHRQGDSGQAMTFFRRALERNPGFADA 631 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L G I + A+ + + + + + KA E Sbjct: 632 -ASNLEKIEAALETYGLAIRALEQAVAASPGDPARL---FQLGRLYAAVGMQDKALAAYE 687 Query: 285 KIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 K + P + +Y + + + +L + ++ ++ + Sbjct: 688 KTIVLKPDDAACLNALGTLYADIC--DIQKAITCFEKLARLAPDNAVVYYNLACLYARQH 745 Query: 340 SIDQAHAKAMLAM 352 + A A+ Sbjct: 746 QVAPALTNLENAL 758 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 69/259 (26%), Gaps = 44/259 (16%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 LA S L L + +A A L I +L Sbjct: 543 LAAAWRHVNSALDLNPGYDLALNLAGSLHMACGNTGQAVALYRKALAITPLSAETFNNLG 602 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------ 215 R GD A + +AL+ +P + + + + AI L Q Sbjct: 603 IALHRQGDSGQAMTFFRRALERNPGFADAASNLEKIEAALETYGLAIRALEQAVAASPGD 662 Query: 216 ------------------KNAKEWNRN------RAILLIARSLENADKGDMIASYHDAIE 251 K + + A L A AD D+ + + Sbjct: 663 PARLFQLGRLYAAVGMQDKALAAYEKTIVLKPDDAACLNALGTLYADICDIQKAITCFEK 722 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +L ++ + A Q++ A LE +A Y + + ++ Sbjct: 723 LARLAPDNAVVYYNLACLYARQHQVAPALTNLENA--------LAAGY------DDMDRI 768 Query: 312 KRALRLEEINKESVESLVI 330 + L+ I +I Sbjct: 769 RTDKDLDNIRHTEAFDRLI 787 >gi|119496609|ref|XP_001265078.1| DnaJ domain protein [Neosartorya fischeri NRRL 181] gi|119413240|gb|EAW23181.1| DnaJ domain protein [Neosartorya fischeri NRRL 181] Length = 688 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 63/193 (32%), Gaps = 22/193 (11%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 L + +S + + ++ + + A + L+M L + Sbjct: 361 ENSLRKAQDIAISMLRENNQDPDALMIRARAYYGLGESEQALKTLKMCLGLDP------- 413 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 D+ A + ++ A AK++ +AI ++ + Sbjct: 414 ----------DMKPAIKLLRTVQKLTRTKEEGNNAF-----KAKDYRKAIELWSEALEVD 458 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + +L R+ + + + +D E+LKL + + A AK+ + Sbjct: 459 PQNKDMNSKILQNRAQAYINLKEYENAINDCNEALKLDPSYVKAQKMRAKAYGGAGNWEE 518 Query: 279 AEVILEKIWKVNP 291 A + + + NP Sbjct: 519 AIRDYKAVAEANP 531 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 14/117 (11%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++RAI + + +I L R+ + + DA +L+L ++ Sbjct: 209 KDGNYNRAIEEFTKAIEINPSS----SIYLSNRAAAYLSANRYLEALEDAERALELDPDN 264 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 A+ L + + +A +L +V P P A K++R ++ Sbjct: 265 SKIMYRLARILTALGRPSEALEVLS---RVQP-PASAT------DRAAPEKMQRFIK 311 >gi|117926265|ref|YP_866882.1| sulfotransferase [Magnetococcus sp. MC-1] gi|117610021|gb|ABK45476.1| sulfotransferase [Magnetococcus sp. MC-1] Length = 1077 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 81/273 (29%), Gaps = 16/273 (5%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 H N A + +LQ P E + + Sbjct: 33 HTPPAQRYSAAMALHRRGALNEAEAAYKTELLQDPDDAEGHHLLGLLLYQQQRHAEARPH 92 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 A + P + + + ++++ A T + + ++ L+ + Sbjct: 93 LAR-VSALRPQSAYHHYHCGLVDMALQDFAAATTCFQKALQYKPDYTD----ALLNLGVV 147 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---- 291 +G A+ ++++++ +S+ A I Q + A+ +L + K P Sbjct: 148 YQQQGKPQAAEQAWLQAIQVDPSSMGAYINLGLFYQEQQRLPDAKQVLMQGLKHAPNALP 207 Query: 292 -HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++A + T L L + + + + +++G+ A + Sbjct: 208 LQEKLAQLLTTLGEYPAALPL--LEAVAQAKPTDWGAQRALGLAQIQVGAFAAAVPQLER 265 Query: 351 AMKIAPRKEIFLL--LAQIEQANSHNTDKILYW 381 + I L LA Q + + W Sbjct: 266 VAQAD-EGRIATLHGLATALQGCGRVDEAVQVW 297 >gi|257482005|ref|ZP_05636046.1| TPR domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330988607|gb|EGH86710.1| TPR domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008865|gb|EGH88921.1| TPR domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 556 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 74 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 246 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|226359536|ref|YP_002777314.1| LuxR family transcriptional regulator [Rhodococcus opacus B4] gi|226238021|dbj|BAH48369.1| putative LuxR family transcriptional regulator [Rhodococcus opacus B4] Length = 772 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 10/105 (9%) Query: 89 YTGLMSIAAHNI----PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 G+++ ++ L K Y + E LV E Q+AL+ +A E Sbjct: 456 TEGMLAAMQGDVTDPVALVAKARHYAAGVADPGLEQLVTRTEAQLALSSGDAALAVTHFE 515 Query: 145 MML------QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 +L + T+ + L R GD A + L I Sbjct: 516 KVLDACRASEDLDTQLEVLLGLGVACGRCGDRARAMTCFEEILAI 560 >gi|196034328|ref|ZP_03101737.1| TPR domain protein [Bacillus cereus W] gi|195992870|gb|EDX56829.1| TPR domain protein [Bacillus cereus W] Length = 219 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L ++ EI + Sbjct: 181 YVFEENNEKALALFKKVTEIQPDHF 205 >gi|187736425|ref|YP_001878537.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] gi|187426477|gb|ACD05756.1| Tetratricopeptide TPR_2 repeat protein [Akkermansia muciniphila ATCC BAA-835] Length = 917 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 71/254 (27%), Gaps = 31/254 (12%) Query: 121 LVYLLEVQ---IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 L L + A R +A M + A A Sbjct: 508 LAQALSAERGKAAQLARDLELARS---QMKTKAD----------KSARNDKKQAEALARA 554 Query: 178 TKALDISPDAPWV---TEAVVQQYVLAKEWSRAITF------LNQKKKNAKEWNRNRAI- 227 KAL+ ++ + AI+ + + E R + Sbjct: 555 QKALEQKNIQVEELTRQMEELKSRSAEQARLAAISAGTITPDQEKALNRSMEATVRRKLE 614 Query: 228 --LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L + E K A+ L + A + L+ +NK +A L+K Sbjct: 615 AEALGQGAAEAFAKKRYAAAEQLYRTLLDFQPAHVPALVNLGTILLQRNKAEEAIKFLKK 674 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLE---EINKESVESLVIVSKIALEMGSID 342 +++ A + L ++ + +L+ + + G+ + Sbjct: 675 ATELDASSSPAWFMMGVAQYRAGEDHHAIASLTETVRLDPANAPALLYLGNLETSAGNYE 734 Query: 343 QAHAKAMLAMKIAP 356 +A A A+KI P Sbjct: 735 KAVAHFENALKIQP 748 >gi|332266747|ref|XP_003282359.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Nomascus leucogenys] Length = 738 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 34 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 93 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 94 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 146 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 147 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 205 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 206 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 263 Query: 360 IFLLL 364 + + Sbjct: 264 VCQYM 268 >gi|329889169|ref|ZP_08267512.1| tetratricopeptide repeat family protein [Brevundimonas diminuta ATCC 11568] gi|328844470|gb|EGF94034.1| tetratricopeptide repeat family protein [Brevundimonas diminuta ATCC 11568] Length = 501 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 77/223 (34%), Gaps = 14/223 (6%) Query: 95 IAAHNIPLARKMHSYVSQQHTF---HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 +A+ R + + + + F + +L+ + +++ A + L+ Sbjct: 79 LASSLGDTGRNLEAVEAARRAFANGGDAPETWLVLARALSGCGRHDEADDAYRQALKRRP 138 Query: 152 TREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK-EWSRAIT 209 AV L G +A AL +P + + + + A Sbjct: 139 VYGDAVRELAQLIWMCGGGREAAAAPVLDALKAAPGDAELLTCLAVVLMYGGADPREAWG 198 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L ++ ++ RA ++ + + A K D + A + + N++ A++ Sbjct: 199 ELTRRVRDGGV----RAAMVEMAAGQLALKFDPALAVGHAHAATQAAPNTLEPWTSLAEA 254 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 +I+ A IL ++ P P+ + H T +LK Sbjct: 255 MIASGDPDGALEILRQL-LAAPTPDQKVLALHA----TASRLK 292 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 69/225 (30%), Gaps = 13/225 (5%) Query: 161 YFESCRIGDLN---SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + +GD A A +A DAP + + A Q K Sbjct: 77 HNLASSLGDTGRNLEAVEAARRAFANGGDAPETWLVLARALSGCGRHDEADDAYRQALKR 136 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLISQNKK 276 + A+ +A+ L G A+ +++LK ++ + + A + Sbjct: 137 RPVYG--DAVRELAQ-LIWMCGGGREAAAAPVLDALKAAPGDAELLTCLAVVLMYGGADP 193 Query: 277 RKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 R+A + E+A L + + + A + ++E ++ Sbjct: 194 REAWGELTRRVRDGGVRAAMVEMAAGQLALKFDPALA-VGHAHAATQAAPNTLEPWTSLA 252 Query: 333 KIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTD 376 + + G D A + P +++ L A + Sbjct: 253 EAMIASGDPDGALEILRQLLAAPTPDQKVLALHATASRLKGQADA 297 >gi|297661669|ref|XP_002809357.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13-like [Pongo abelii] Length = 814 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 114 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 173 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 174 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 226 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 227 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 285 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 286 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 343 Query: 360 IFLLL 364 + + Sbjct: 344 VCQYM 348 >gi|296114966|ref|ZP_06833611.1| cellulose synthase operon C domain protein [Gluconacetobacter hansenii ATCC 23769] gi|295978484|gb|EFG85217.1| cellulose synthase operon C domain protein [Gluconacetobacter hansenii ATCC 23769] Length = 1195 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 91/288 (31%), Gaps = 24/288 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATRE 154 A + + + ++ + + + ++ + E Q N A+ L + ++ Sbjct: 433 TGQTGEAERNYRAILARN--GDNPIALMGLARVLMGEGQENEANALLSRLGGRYSDQVQQ 490 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 V + E+ R D +A+ +PD PW+ + + + A + Sbjct: 491 IEVSGIMAEAARTSDSAQKVSLLRQAMTKAPDDPWLRINLANALQQQGDSAEAANVMRPL 550 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI--CAAKSLIS 272 + + +A +L A + D +A A L + +I A + I Sbjct: 551 LTSPRTPADYQAAILYASG----NGNDTLARRLLA----GLSPDDYSPAIRTIADEMAIK 602 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + + ++ NP P + + T + L + + + + + Sbjct: 603 ADLASRLSMV------SNPTPLVREALAA--PDPTGARGVAVADLFRQRGDMLHAHMALR 654 Query: 333 KIALEMGSIDQAH--AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + + A A MKI+ LLA + + T Sbjct: 655 IASTRNIDLTTEQRLAYATEYMKISNPVAAARLLAPLGDGSGTATGSA 702 >gi|281350820|gb|EFB26404.1| hypothetical protein PANDA_005322 [Ailuropoda melanoleuca] Length = 770 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 66 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 125 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 126 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 178 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 179 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 237 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 238 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 295 Query: 360 IFLLL 364 + + Sbjct: 296 VCQYM 300 >gi|194206137|ref|XP_001916733.1| PREDICTED: tetratricopeptide repeat domain 13 [Equus caballus] Length = 852 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 148 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNADLALFELSRVITLEPDR 207 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 208 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 260 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 261 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 319 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 320 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 377 Query: 360 IFLLL 364 + + Sbjct: 378 VCQYM 382 >gi|239741018|ref|XP_002342056.1| PREDICTED: tetratricopeptide repeat protein 34 [Homo sapiens] gi|190462818|sp|A8MYJ7|TTC34_HUMAN RecName: Full=Tetratricopeptide repeat protein 34; Short=TPR repeat protein 34 Length = 566 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283 L R+L + + + D + +LKL +++ + + A++LI+Q +L Sbjct: 214 ALCGRALVHLALDQLQEAVDDIVSALKLGPGTVVPELRSLKPEAQALITQGLYSHCRALL 273 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ + L ++T G L L +I+ ++++ I + GS ++ Sbjct: 274 S---------QLPDTGAPLEDKDTQGLLAVGEALIKIDSGQPHWHLLLADILMAQGSYEE 324 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNT-DKILYWTQSA-LHAM 389 A A+ AP E + Q + A + A Sbjct: 325 AGTHLEKALHRAPTSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAP 372 >gi|170784867|ref|NP_078801.3| tetratricopeptide repeat protein 13 isoform a [Homo sapiens] gi|212276494|sp|Q8NBP0|TTC13_HUMAN RecName: Full=Tetratricopeptide repeat protein 13; Short=TPR repeat protein 13 gi|55960679|emb|CAI17217.1| tetratricopeptide repeat domain 13 [Homo sapiens] gi|55962311|emb|CAI15330.1| tetratricopeptide repeat domain 13 [Homo sapiens] Length = 860 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385 Query: 360 IFLLL 364 + + Sbjct: 386 VCQYM 390 >gi|114573136|ref|XP_001149624.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 6 [Pan troglodytes] gi|114573138|ref|XP_001149480.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Pan troglodytes] Length = 860 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385 Query: 360 IFLLL 364 + + Sbjct: 386 VCQYM 390 >gi|114573146|ref|XP_524534.2| PREDICTED: tetratricopeptide repeat domain 13 isoform 7 [Pan troglodytes] Length = 845 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385 Query: 360 IFLLL 364 + + Sbjct: 386 VCQYM 390 >gi|114573148|ref|XP_001148919.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1 [Pan troglodytes] Length = 769 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385 Query: 360 IFLLL 364 + + Sbjct: 386 VCQYM 390 >gi|109020014|ref|XP_001107062.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 5 [Macaca mulatta] Length = 860 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385 Query: 360 IFLLL 364 + + Sbjct: 386 VCQYM 390 >gi|73952538|ref|XP_546094.2| PREDICTED: similar to tetratricopeptide repeat domain 13 isoform 1 [Canis familiaris] Length = 859 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 155 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 214 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 215 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 267 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 268 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 326 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 327 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 384 Query: 360 IFLLL 364 + + Sbjct: 385 VCQYM 389 >gi|50949446|emb|CAH10599.1| hypothetical protein [Homo sapiens] Length = 785 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 81 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 140 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 141 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 193 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 194 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 252 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 253 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 310 Query: 360 IFLLL 364 + + Sbjct: 311 VCQYM 315 >gi|47210998|emb|CAF95830.1| unnamed protein product [Tetraodon nigroviridis] Length = 402 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 32/210 (15%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYS 159 A + S + F E L L +Y A +L++ +T V Sbjct: 70 RALAVASACQRFKIFKAECLALL---------GRYPEAQSVATDILRLDSTNADALYVRG 120 Query: 160 L--YFESCRIGDLNSAQRYATKALDISPDAPWVTEA-----VVQQYVLAK-------EWS 205 L Y+E C ++ A ++ +AL ++PD A ++ + Sbjct: 121 LCLYYEDC----IDKAVQFFIQALRMAPDHEKARLACRNAKALKAKKEEGNEAFKKCNYE 176 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A + + A L R+ A + + D ++KL D I A + Sbjct: 177 AAYQLYTKALMIDPNNIKTNAKLYCNRATAGAKLNKLNQTIEDCTSAIKLDDTYIKAYLR 236 Query: 266 AAKSLISQNKKRKAEVILEKIW---KVNPH 292 A+ + + +A EK++ K + H Sbjct: 237 RAQCYMDTEQYEEAVRDYEKVYHDSKKHQH 266 >gi|268562285|ref|XP_002638558.1| Hypothetical protein CBG05596 [Caenorhabditis briggsae] gi|187034843|emb|CAP26045.1| hypothetical protein CBG_05596 [Caenorhabditis briggsae AF16] Length = 956 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 82/227 (36%), Gaps = 26/227 (11%) Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A+ + +P P WV AV+++ + A + + ++ + Sbjct: 304 DIKKARMLLKSVRETNPRHPPAWVASAVLEEQA--GKLQTARNLI---MEGCEKIKNSEE 358 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A L +D G I + +++ C S+ A+ K+K +L K Sbjct: 359 LWLHAIRLHPSDVGKSIVA-----NAVRSCPQSVRLWCKASDLEQDIKDKKK---VLRKA 410 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P ++ L E L RA E S E + ++++ + + A Sbjct: 411 LEQIPSSVKLWKAAVELEDPEEARILLTRA---VECCSSSTEMWLALARL----ETYENA 463 Query: 345 HAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A + P I+L A++E+ + AL+++ Sbjct: 464 RKVLNKAREHIPTDRHIWLSAARLEETRGQKD-MVDKIVSKALNSLR 509 >gi|22761440|dbj|BAC11586.1| unnamed protein product [Homo sapiens] Length = 860 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 268 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 269 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 327 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 328 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 385 Query: 360 IFLLL 364 + + Sbjct: 386 VCQYM 390 >gi|85710130|ref|ZP_01041195.1| thioredoxin [Erythrobacter sp. NAP1] gi|85688840|gb|EAQ28844.1| thioredoxin [Erythrobacter sp. NAP1] Length = 310 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI---LEKIWKVNP 291 + +GD + + + ++ A +SL++ + +A+ + +E K+ Sbjct: 145 DALGEGDAQRAASIFAQVTEFASDNAPAHAGLVRSLVALGQVEEAKQVMTAIEADPKLAS 204 Query: 292 HPEIANIYTHLLSENTV---GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 P IA + L T G+L + + +++E+ + ++ A G D+A Sbjct: 205 DPSIAAAKSALELAGTQVDDGELASLRDTAKASPDNMEAQMAYAEAAFAGGQRDEAAD-- 262 Query: 349 MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 LLA IE N A Sbjct: 263 -------------TLLAMIEADREWNDGAARAKLLQIFEA 289 >gi|323698111|ref|ZP_08110023.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio sp. ND132] gi|323458043|gb|EGB13908.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio desulfuricans ND132] Length = 758 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 16/180 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-QI 149 G +++ + P A + + V L + + A L + Q Sbjct: 584 GNLAVNRGDDPAAERDYRKAIAIDDHFYPAKVNL--AMLYNRQGDNVRAERLLREVTVQR 641 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT----EAVVQQYVLAKEWS 205 P E A YSL +G A+ Y +A + P+ + ++ + Sbjct: 642 PDLYEVA-YSLGLLLAEMGRYTDAETYLGRAAEHLPENARAQYNYGQVLLALKRPVE--- 697 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 K A + + +A + G + A+ L+ A+ Sbjct: 698 -----AEAAMKRALDAAPHNQAYFVALANFYLASGRPDKARDLALRILERSPGDTAATEL 752 Score = 38.0 bits (87), Expect = 4.1, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 21/192 (10%) Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 +A + P + + + Q + ++ R L + + Sbjct: 538 EAAALLSSLPESDLREADREAFRAD----LEDYRQSLRYNADFAAQR-YNLGNLA---VN 589 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 +GD A+ D +++ + D+ A + A Q +AE +L ++ P++ + Sbjct: 590 RGDDPAAERDYRKAIAIDDHFYPAKVNLAMLYNRQGDNVRAERLLREV--TVQRPDLYEV 647 Query: 299 YTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 L + L RA E E+ + ++ L + +A A Sbjct: 648 AYSLGLLLAEMGRYTDAETYLGRA---AEHLPENARAQYNYGQVLLALKRPVEAEAAMKR 704 Query: 351 AMKIAPRKEIFL 362 A+ AP + + Sbjct: 705 ALDAAPHNQAYF 716 >gi|323489123|ref|ZP_08094357.1| Tetratricopeptide repeat protein [Planococcus donghaensis MPA1U2] gi|323397246|gb|EGA90058.1| Tetratricopeptide repeat protein [Planococcus donghaensis MPA1U2] Length = 1382 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 55/159 (34%), Gaps = 7/159 (4%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L + L ++A +++ A ++ + A L + D + A + A Sbjct: 895 LAHYLLGRLAEQTEKWHEALAHYTKCVKADSRFMVAHEGLMRSYLALEDQDRAFKAALFV 954 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L+ P + + E + + S A + LL A++ +G Sbjct: 955 LENEPLSLDLQE-LFELVD-----SDAKQLAIGRVLEKVSAQVLEEWLLSAKAQLAEKRG 1008 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + + +++ L ++ + + + Q ++A Sbjct: 1009 KVAEAENLLLQAQALN-GALPSRYQYMQFCVRQGDLKRA 1046 >gi|294776566|ref|ZP_06742038.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510] gi|294449583|gb|EFG18111.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510] Length = 284 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L AR+ + + D E+ KL + + + +SQ KKR+A V Sbjct: 204 RDVSYLKARATLAVEMNTPDLALLDLEEAAKLAPDDAEIYVMCGEIYLSQKKKREAYVAF 263 Query: 284 EKIWKVN-PHPEI 295 EK ++ P PE+ Sbjct: 264 EKAIELGVPRPEL 276 >gi|289643209|ref|ZP_06475336.1| adenylate/guanylate cyclase with TPR repeats [Frankia symbiont of Datisca glomerata] gi|289506980|gb|EFD27952.1| adenylate/guanylate cyclase with TPR repeats [Frankia symbiont of Datisca glomerata] Length = 1295 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 31/188 (16%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 + GL + A + +L Q A + + A M+ Sbjct: 1025 VARGLAARGAGD-----------------PERGAAHLHNAQAAADQGGH--AVVGALSMV 1065 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSR 206 + TR A L E+ + DL A +L++ P A + + Q A Sbjct: 1066 LLGLTRLDA--GLLNEAEQAADLA---MRALDSLELQPHAQLGAKVLAAQVARARGRLQE 1120 Query: 207 AITFLNQKKKNAKEWN----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 AI L + R +A + + D G + A ++++ + A Sbjct: 1121 AIQLLETALAAGEPATLLFPRRQAYAHL--AGTLLDAGRPAEALAVARRAVEVGAEDVRA 1178 Query: 263 SICAAKSL 270 + A ++L Sbjct: 1179 QVLAWRAL 1186 >gi|295690653|ref|YP_003594346.1| tetratricopeptide repeat-containing protein [Caulobacter segnis ATCC 21756] gi|295432556|gb|ADG11728.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter segnis ATCC 21756] Length = 497 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 80/276 (28%), Gaps = 20/276 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEK-LEMMLQIPATRE 154 A +M + + + LL A + +++ A + + PA R Sbjct: 16 GRAAEALRMTAAPA----LSPQATSGLLMAHAAALKAVGRHDEALTFNRRAVTRAPADRF 71 Query: 155 FAVYSLYFESCRIGD---LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 Y + +GD A+ A K + + D P V + + + + A Sbjct: 72 A----WYNLAATLGDLSLHAEAEEAARKTIALGLDVPEVRLVLGKALQGLRRYDEAEGAF 127 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + L L G A+ ++ + + L Sbjct: 128 ETALAARPT---DATVHLELAQLRWMRTGRTDAALALLDAAIARHPTVSNLRLIRSTVLT 184 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINKESVESL 328 A+ LE P + I + + L A + + E+ Sbjct: 185 FAGDHAGADATLEDALARAPDDLLVRIAAARSAGAQGDRERMLGHAREAQRRAHGAGETR 244 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 ++ + L G D A A + AP + L+L Sbjct: 245 AVLCEALLANGEADAAARVAEDMVAAAPDDQYALVL 280 >gi|261327858|emb|CBH10836.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 1502 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 80/273 (29%), Gaps = 12/273 (4%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 ARK + + E E + A + + A +K E M + R+ + Sbjct: 476 EEEAARKKAEEEAARKRAEEEAARKKAEEEAARKKAEEEAARKKAEKMRKRAQARKARMK 535 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + + + + +A++ A + ++ +A +K+ Sbjct: 536 A-EEAARKRAEEEAARKKAEEEAARKRAEEEAARKRAEEEAAR---KKAEEEAARKRAE- 590 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 +E R RA AR + A A + + A AA+ + RK Sbjct: 591 EEAARKRAEEEAARKRAEEEAARKKAEEEAARKKAEEEAARKRAEEEAARKRAEEEAARK 650 Query: 279 AEVILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 E+ + E A +E + K E + + Sbjct: 651 KAE--EEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEEEAARKKAEE 708 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 A + ++A K M+ + + A+ Sbjct: 709 EAARKKAEEEAARKKAEKMRKRAQARKARMKAE 741 >gi|224588264|gb|ACN58888.1| TPR repeat protein [uncultured bacterium BLR13] Length = 746 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 76/242 (31%), Gaps = 26/242 (10%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + +A + +AL ++P A + + ++ Sbjct: 166 QQTKRYAAALQSVEQALALNPHNVEAYNNRGNILRELGRLDEAGESYRRALELVPQY--A 223 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + R L + ++ + + +++ L A A L N+ A E Sbjct: 224 DAHCNLGRLLLSRERFE--DALQCYDQAIGLDPQLAQAYRHRAIVLRKLNRTEDALRDNE 281 Query: 285 KIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKES----VESLVIVS 332 + E+ + Y L E+ G + L+L+ + ++ + + ++ + Sbjct: 282 TASGLQ--RELTDAYCKLGKELREQGRPESAAGVIAALLKLDGSDSDAGIWQLHARMLNA 339 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALH-AMP 390 G + A A A+ + P + L I +A + + A+ A Sbjct: 340 -----AGRHEDALASIGRALALKPDSGDYHLTRGAILRATLQ-YEAARQCYEKAVELAPR 393 Query: 391 DP 392 P Sbjct: 394 HP 395 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 93/259 (35%), Gaps = 24/259 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 E + A E +L++ A++ + + + G+ + A + AL + PD Sbjct: 32 EGELAKAMHTYEQVLKLAPRHVEALHHVGIVAFQTGNFDMAAGFIRSALTVDPDHAGAHG 91 Query: 193 AVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + A+ ++ + + + + ++L+ + D + SY A+E Sbjct: 92 DLGNALREMQHLEDALRSYDRALELTGGDADTYYNRAVALQALQRQE--DALHSYDQALE 149 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVI--LEKIWKVNPHPEIANIYTH-------- 301 D ++++ Q KR A + +E+ +NPH Y + Sbjct: 150 LNAGDDQ-----AWNNRAVVFQQTKRYAAALQSVEQALALNPHN--VEAYNNRGNILREL 202 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEI 360 + +RAL L + ++ + ++ L + A A+ + P+ + Sbjct: 203 GRLDEAGESYRRALELV---PQYADAHCNLGRLLLSRERFEDALQCYDQAIGLDPQLAQA 259 Query: 361 FLLLAQIEQANSHNTDKIL 379 + A + + + D + Sbjct: 260 YRHRAIVLRKLNRTEDALR 278 >gi|307150426|ref|YP_003885810.1| purine or other phosphorylase family 1 [Cyanothece sp. PCC 7822] gi|306980654|gb|ADN12535.1| purine or other phosphorylase family 1 [Cyanothece sp. PCC 7822] Length = 1389 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 5/144 (3%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L K + ++ LI L++ +G I++ + ++ A AA+ Sbjct: 321 DELWHKADDKAKYRLLAKTGLIQLGLDHYHEGASNL-----IKAKQYNPDNETALALAAR 375 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 I + +AE+++EK+ + NP +A ++ K ++ E + + L Sbjct: 376 GHILHKQYEQAEILIEKVLEKNPANALAYSLRVDMANEADSIDKILEQIPEPYRNEPDVL 435 Query: 329 VIVSKIALEMGSIDQAHAKAMLAM 352 + + + A QA A+ Sbjct: 436 IALGQAAFNRQLYPQAEEWVQSAI 459 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 15/137 (10%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 ++ AI ++ + + A + R++ +KG+ +Y + + L Sbjct: 543 GKYDEAIRDIDLVLQREPD----NAYCIKQRAILAHEKGNEEQAYEFSKKLLS-SPEIPE 597 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--------ANIYTHLLSENTVGKLKR 313 ASI AA SLI+ + +A+ ILE+ + H ++ IY L + K+ Sbjct: 598 ASILAASSLITMQRFPEAQKILEEFQQTEGHEKLKQETKRLQVEIYFKLKDYKSAQKI-- 655 Query: 314 ALRLEEINKESVESLVI 330 L + E+ +L++ Sbjct: 656 LEELLNGDPENTFNLIL 672 >gi|171059259|ref|YP_001791608.1| response regulator receiver protein [Leptothrix cholodnii SP-6] gi|170776704|gb|ACB34843.1| response regulator receiver protein [Leptothrix cholodnii SP-6] Length = 577 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 11/149 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 AR + + + + L + + A LE ++ + A Sbjct: 183 GRHDDARALFTAIRETRAL---PWAKLGIARAEVEAGTTVQARRTLESLISDNPSFADAY 239 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL----AKEWSRAITFLNQ 213 + GDL A +A I+P + +Q+ + A +W A L + Sbjct: 240 DVMGRVQVEQGDLEGALATFRRASAITP----ASVTRLQKQGMLAFYAGQWDEAGKALER 295 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDM 242 L+ +L D+ D Sbjct: 296 AMVTGLSSKMFDMQTLVLLALLRFDQTDP 324 >gi|188993860|ref|YP_001905870.1| hypothetical protein xccb100_4465 [Xanthomonas campestris pv. campestris str. B100] gi|167735620|emb|CAP53838.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 919 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%) Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 K +R RA L R L+ + + E+LKL + +A+ Q + + Sbjct: 798 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 857 Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A LE K++P + + Y + + K + + + ++ Sbjct: 858 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 915 Query: 334 I 334 + Sbjct: 916 L 916 >gi|27803004|emb|CAD60707.1| unnamed protein product [Podospora anserina] Length = 508 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 56/189 (29%), Gaps = 17/189 (8%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ AA + + + L Q L++ + N A + + + Sbjct: 8 LAFAAGFLSTPSMVSGLSTSDIPADTPISALLASAQSHLSKGETNDALVYYDAAIARDPS 67 Query: 153 REFAVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 L+ + +G + A K L I P + + A +W A Sbjct: 68 NYLT---LFKRATTYLSLGRRSQATDDFEKVLSIKPTFEGAHLQLGKLRASAADWDGAKL 124 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + KK + A + A G+ E +K D+ +I A Sbjct: 125 HYKKAKKTEEVAAVEAAKAAAKAAEAAAKAGN-------WEECVKQADD----AILTANR 173 Query: 270 LISQNKKRK 278 I + RK Sbjct: 174 AIHLRELRK 182 >gi|225873133|ref|YP_002754592.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] gi|225791697|gb|ACO31787.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] Length = 744 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 56/169 (33%), Gaps = 13/169 (7%) Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 +++ A+ + + ++ A ++ ++ +L L + A Sbjct: 540 QYAAAVKAFDHVVQLRPDY----ADAYTNIAVVEIPWEKYGSAMDSIRRALMLSPHDARA 595 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRL 317 AA ++ L + K P E+ Y L + +++ L Sbjct: 596 HYYAALLERRAGHPQQEVADLLEAEKQYPQSRDVRRELGVAYYRLGEDKLA--IEQFEAL 653 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM--KIAPRKEIFLLL 364 E+I+ + + + ++ + G QA A+ L + K+ + Sbjct: 654 EKIDPDDLAAHYNLAILYHRAGMATQARAEQALFVTEKVNSTARSLSFM 702 >gi|195472283|ref|XP_002088430.1| GE12522 [Drosophila yakuba] gi|194174531|gb|EDW88142.1| GE12522 [Drosophila yakuba] Length = 590 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 11/205 (5%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++L ++ + + NA RA I R+ D E+ +L Sbjct: 306 FHLLCGSYAESQQDFDAILANADADPNLRAYAYIKRAALFIQLDQREKGLADFDEAERLN 365 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKR 313 + A+ L+ + A EK ++ P IA Y G +R Sbjct: 366 PENPDVYHQRAQILLLLEQIEPALAEFEKAVRIAPDHAIAFVQKCYAEYRLSLLAGDQRR 425 Query: 314 ALRL-------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + + VE +++++ + QA AMK+AP ++ Sbjct: 426 LESVMHTFQNAIDRFPSCVECYSLMAQVLADQQQFPQAQEYYEKAMKLAPTNPALIVHQA 485 Query: 367 IEQAN-SHNTDKILYWTQSALHAMP 390 I + + + A+ P Sbjct: 486 IMVLQWRGDIEMAVQLLNKAIEVDP 510 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 7/156 (4%) Query: 171 NSAQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A KA+ I+PD A + +LA + R + ++ +NA + + Sbjct: 386 EPALAEFEKAVRIAPDHAIAFVQKCYAEYRLSLLAGDQRRLESVMHT-FQNAIDRFPSCV 444 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEK 285 + AD+ + +++KL + + A ++ + A +L K Sbjct: 445 ECYSLMAQVLADQQQFPQAQEYYEKAMKLAPTNPALIVHQAIMVLQWRGDIEMAVQLLNK 504 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 +V+P E+A + E +LKRA+ L E Sbjct: 505 AIEVDPKCELAYETLGTV-EVQRAQLKRAVELFEKA 539 >gi|149919362|ref|ZP_01907844.1| hypothetical protein PPSIR1_04078 [Plesiocystis pacifica SIR-1] gi|149819862|gb|EDM79286.1| hypothetical protein PPSIR1_04078 [Plesiocystis pacifica SIR-1] Length = 589 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 12/124 (9%) Query: 157 VYSLYFESCRI----GDLNSAQRYATKALDISPDAPWVTEAVVQQY---VLAKEWSRAIT 209 + LY + GD A + +AL++ P + + A S + Sbjct: 320 LLGLYMQRIAAHVADGDTKQAIAMSEQALELDPT-----DRTLNLQHVIATAMRNSGSGR 374 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + E+NR RA++ A +L+ G ++ ++ + + + A+ Sbjct: 375 KLLADWEADPEYNRMRALVETAYALKMMGIGQFASARAATEKAERYAPELLETHLARAEL 434 Query: 270 LISQ 273 Sbjct: 435 QAET 438 Score = 37.6 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 57/149 (38%), Gaps = 11/149 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREF-----AVYSLYFESCRI---GDLNSAQRYA 177 E + ALAE + A + +++ +R+ A+ SL + D +SA Sbjct: 48 EAETALAEGDESRAEQLYREVMRNKKSRDSEDARRALVSLLLQRAARMMETDSDSAMPIY 107 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + + PD+ A + + + ++ A+ L + K + +++ I N Sbjct: 108 RDVISLKPDSDEARIAYARALMKVERYTEAVDVLMED-KGCRGCKSLISVIYIESGNTNV 166 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICA 266 G+ + D +L + + ++ A Sbjct: 167 RDGNYSEALEDYDLALSVNRD--PLTVLA 193 >gi|71747738|ref|XP_822924.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70832592|gb|EAN78096.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 466 Score = 42.2 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 86/220 (39%), Gaps = 28/220 (12%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 V L R GDL + ++ KAL ++P +P + + Q +L ++ AI + ++ Sbjct: 100 VKGLLT--RRSGDLTISFQHFQKALTLNPGSPACLQQLAQTSLLLGKFYEAIESFQRAEE 157 Query: 217 N------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K+W+ + L + K + ++ +++ + + +K L Sbjct: 158 ARAARGFRKDWSLQYGVGLCYEYMREYRKAE--EAFVSSMQIQRFDCT----VLRLSKVL 211 Query: 271 ISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHL-LSENTVGKLKRALRLEEINKES 324 + Q + +A +LE+ +P +P+ + +Y + L R L L S Sbjct: 212 VLQKQHSRAISLLEEAVLGSPDNPDMLTVLGLLYLRVDRPAKAFNYLGRCLIL-----NS 266 Query: 325 VESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIFL 362 +S ++ ++ E G A K +A+ P L Sbjct: 267 SDSRATMAAASIMQENGEFGVALNKYRVAVPKLP-SSACL 305 >gi|321311728|ref|YP_004204015.1| hypothetical protein BSn5_01770 [Bacillus subtilis BSn5] gi|320018002|gb|ADV92988.1| hypothetical protein BSn5_01770 [Bacillus subtilis BSn5] Length = 423 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 16/253 (6%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC 165 + + NE ++ ++ A+ Y A + + + V+ ES Sbjct: 122 QKLLQAKSILDNEPVIDFALGELYFAQGAYAKAVQYFKTTAEEQSEIGGVNVHQRLAESL 181 Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ A + KA+D +PD + A + + + ++ + KE + + Sbjct: 182 SASGEFEDAIPWYEKAVDENPD----PNTIFGYGFTALQ-AGLVKTAIKQLSDLKELDPS 236 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L + S +G + A E ++ + + + AAK + K + + +L+ Sbjct: 237 YTSLYMPLSKSYEAEGMYEEALKTAKEGIRYDEYNKELFLYAAKMALKIGKSEEGKKLLQ 296 Query: 285 KIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++P H +A + E+ + + +E + ++ E+ Sbjct: 297 EALVLDPGFVEALHTLLA---VYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLASAYTEL 353 Query: 339 GSIDQAHAKAMLA 351 ++A A Sbjct: 354 EQYEEAKQSFEAA 366 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 5/127 (3%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 LI +++ + G+ + ++ K + A AA+ KA ++ + Sbjct: 3 TLIQEAIKLVEAGETEKGLNTLSKAEKQLHDEDKA--IAAQLYYEWGDVEKAISLISDLH 60 Query: 288 KVNPHP-EIANIYTHLLSE--NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ E+ N Y LL + L + E + ESL++++ + G + + Sbjct: 61 DLYPNETELTNFYAELLIDIDEEEKALAVLETIPETDPSYPESLLLMADLYQMQGLFEVS 120 Query: 345 HAKAMLA 351 K + A Sbjct: 121 EQKLLQA 127 >gi|319781537|ref|YP_004141013.1| Tetratricopeptide TPR_1 repeat-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167425|gb|ADV10963.1| Tetratricopeptide TPR_1 repeat-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 280 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 10/133 (7%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + A + +Q+ T A L ++S G A + A+ ++PDA Sbjct: 147 AGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQ--GQHKFAIEDFSTAISLAPDAAEP 204 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 Y+ + A + N K + K ++L +GD + Sbjct: 205 YNGRGLSYLATNDEDNAFSDFNMAIKLDGKNAEAW-----ANQALIYERRGDKAKAAKSY 259 Query: 250 IESLKLCDNSIMA 262 E+++L A Sbjct: 260 KEAVRLDPTYQPA 272 >gi|297161762|gb|ADI11474.1| hypothetical protein SBI_08356 [Streptomyces bingchenggensis BCW-1] Length = 446 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 7/147 (4%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G + A A +A + P P V + L + + A L + +K+A + A Sbjct: 166 GRYDEAYAAARRADSLRPGIP-VFTRLAYVLELRGDPAGARRVLLRARKSA-TAPGDVAY 223 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 + A +G + ++L+ + A ++ + A LE++ Sbjct: 224 VATALGQLAWSQGQFPRARGHFADALRADPGYLPALEGRGRTHAAVGDLDAAARDLEEVV 283 Query: 288 KVNPHP----EIANIYTHLLSENTVGK 310 + P P + +Y + T + Sbjct: 284 RRYPLPAELAALGEVY-EARGDRTRAR 309 >gi|240139236|ref|YP_002963711.1| hypothetical protein MexAM1_META1p2664 [Methylobacterium extorquens AM1] gi|240009208|gb|ACS40434.1| Hypothetical protein MexAM1_META1p2664 [Methylobacterium extorquens AM1] Length = 764 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 53/184 (28%), Gaps = 8/184 (4%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 ++ A + A V +E + +AL + A E + + Sbjct: 31 ALNAGRLDEAEHQARSVLAAR--PHEPTALDVLGCVALNRGRPEEALAHFERVRATRSKD 88 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++L + G SA R+ KA ++ PD + ++ A Sbjct: 89 PLLQFNLGEAHRQTGAPGSALRHFRKAAELRPDFAEAHGQAGEMLRALGRFTEAAKAYQS 148 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 E A L +L +G+ + +L+ + + A + Sbjct: 149 ALMLKPEL----AHCLAGFALLLVREGEFGQAVPFFEAALRATP--VTMAPARAPLWANL 202 Query: 274 NKKR 277 R Sbjct: 203 GSAR 206 >gi|73989452|ref|XP_534177.2| PREDICTED: similar to CG5038-PA [Canis familiaris] Length = 1013 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 8/123 (6%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ + + EW A + ADKG+ A+ E++ Sbjct: 726 MLRCMIRSGEWRNEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 781 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 782 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 837 Query: 314 ALR 316 Sbjct: 838 FEA 840 >gi|88706342|ref|ZP_01104048.1| adenylate/guanylate cyclase protein [Congregibacter litoralis KT71] gi|88699493|gb|EAQ96606.1| adenylate/guanylate cyclase protein [Congregibacter litoralis KT71] Length = 728 Score = 42.2 bits (98), Expect = 0.22, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ML + + ++ + SA +ALD+ P L K + Sbjct: 324 MLANAQYQSAGMQG--RQAM----ILSASELVAEALDLDPQLAEAHGMSALLLSLQKRNA 377 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A +++ + + R A L + + D + ++++L + Sbjct: 378 EARAAVDRAIELRPSYARAYATL----ASLLYAEADFDGALAQIRKAIELDPQEDSFRLQ 433 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNP 291 A+SL S ++ +A ++++ K NP Sbjct: 434 LARSLWSVSRAEEAVAMVKESIKRNP 459 Score = 36.8 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 54/160 (33%), Gaps = 20/160 (12%) Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI------- 271 + +L + +E + + E++ + N MA + A + Sbjct: 278 PDLEAYEKFILGKQQMEQQSRPAAENAKRLFQEAIDIDPNYAMAYVMLANAQYQSAGMQG 337 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIY--------THLLSENTVGKLKRALRLEEINKE 323 Q A ++ + ++ P++A + + + RA+ L Sbjct: 338 RQAMILSASELVAEALDLD--PQLAEAHGMSALLLSLQKRNAEARAAVDRAIEL---RPS 392 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + ++ + D A A+ A+++ P+++ F L Sbjct: 393 YARAYATLASLLYAEADFDGALAQIRKAIELDPQEDSFRL 432 >gi|317037649|ref|XP_001398829.2| DnaJ and TPR domain protein [Aspergillus niger CBS 513.88] Length = 740 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 90/290 (31%), Gaps = 48/290 (16%) Query: 82 DKGYKALYTG--------LMSIAAH-----NIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 D+ + L G LM+ A + + +S + ++ + Sbjct: 379 DQARQLLGQGVKEPRKWTLMTAEAQLKMGNDNSYGKAQDIAISMLRVNSQDPDALMIRAR 438 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + L+M L + D+ +A + + Sbjct: 439 AFYGMGDTEQALKLLKMCLGLDP-----------------DMKAAIKLLRTVQKLVRTKE 481 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A AK++ RAI + + A +L R+ + + ++ D Sbjct: 482 EGNTAF-----KAKDYRRAIDLWGEALTVDPKNKDQNAKILQNRAQAYINLKEYDSAVAD 536 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 E+L+L + A AK+ +A + + + NP + Sbjct: 537 CNEALRLDPGYLKAQKMRAKAHGGAGNWEEAVRDYKAVAESNP-----------TEKGIQ 585 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +++RA E+ K + + ++ + G + A +A++ P K Sbjct: 586 EEIRRAEF--ELKKAQRKDYYKILGVSKDAGEQEIKKAYRKMAIQYHPDK 633 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 64/183 (34%), Gaps = 26/183 (14%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++RAI + + + ++ L R+ +A+ D + +L + Sbjct: 257 KDGNYARAIEEFTKALEISPNS----SVYLSNRAAAYMAANQYLAALEDCERACELDPTN 312 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 A+ L S + +A +L ++ P + + A ++ Sbjct: 313 TKIMYRLARILTSLGRPTEALDVLS---RIEP------------PASATDRAA-AEKMLR 356 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL---AQIEQANSHNTD 376 ++ E+L +++ + +DQA +K + L+ AQ++ N ++ Sbjct: 357 FVSQAEEALSQDRGVSMVLFCLDQARQLLGQGVKEP---RKWTLMTAEAQLKMGNDNSYG 413 Query: 377 KIL 379 K Sbjct: 414 KAQ 416 >gi|303248804|ref|ZP_07335055.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ] gi|302489816|gb|EFL49746.1| TPR repeat-containing protein [Desulfovibrio fructosovorans JJ] Length = 567 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 78/263 (29%), Gaps = 41/263 (15%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 ++ A E ML A L R + A + P Sbjct: 230 ESQGDLAGAEEAYRKMLSQDAGSPEVQARLLRVLLRRKQPDQALKLLRDEAPDKPHLLDA 289 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADK----- 239 A ++ + +A+ L + + +A+L ++LE Sbjct: 290 MSAFLEAGYTKQA-RQALDMLVAADPGSPDLPFYKAVLAYEGDKNPKKALEILAAVAPDN 348 Query: 240 -----------------GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 GD + E+ + A L + +A + Sbjct: 349 PNYDKSLSFRIQIATELGDYAKAEGLVREARTRYPDRKEFIAVEAALLDKRGDTAQAAKV 408 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-------LRLEEINKESVESLVIVS-KI 334 LEK +P ++ +Y + + + KLKR ++ + + ++L + + Sbjct: 409 LEKALAASPD-DLDLLYRYGV---ALEKLKRRGEAKAVMEKIVAKDPVNPDALNYLGYSL 464 Query: 335 ALEMGSIDQAHAKAMLAMKIAPR 357 A E +D+A LA+ P Sbjct: 465 AEEGRDLDKAVDMIRLALSKEPD 487 Score = 36.8 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 78/270 (28%), Gaps = 15/270 (5%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISP 185 + ++ A + L + + L ++ +G A +A+D Sbjct: 159 ASLLEDAGKHKEALQVLSRIPEADRDAATCY--LMAKAMAGLGRNAKAVTLLRQAVDKDQ 216 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + A + +A + + Sbjct: 217 TLLPAWLDLGGLLESQGDLAGAEEAYRKMLSQDAGSPEVQA----RLLRVLLRRKQPDQA 272 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304 + + + A + + ++A L+ + +P P++ L Sbjct: 273 LKLLRDEAPDKPHL----LDAMSAFLEAGYTKQARQALDMLVAADPGSPDLPFYKAVLAY 328 Query: 305 ENTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 E K L + ++ +SL +IA E+G +A A P ++ F Sbjct: 329 EGDKNPKKALEILAAVAPDNPNYDKSLSFRIQIATELGDYAKAEGLVREARTRYPDRKEF 388 Query: 362 LLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + +T + + AL A PD Sbjct: 389 IAVEAALLDKRGDTAQAAKVLEKALAASPD 418 >gi|289627920|ref|ZP_06460874.1| TPR domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647285|ref|ZP_06478628.1| TPR domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330868896|gb|EGH03605.1| TPR domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 556 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 74 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLV 246 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|260942649|ref|XP_002615623.1| hypothetical protein CLUG_04505 [Clavispora lusitaniae ATCC 42720] gi|238850913|gb|EEQ40377.1| hypothetical protein CLUG_04505 [Clavispora lusitaniae ATCC 42720] Length = 681 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 12/195 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQI 149 G A + + +Y F +L L L +Q N+A E L QI Sbjct: 404 GFAHTFALEGEHEQAISAYAFAARLFPGTHLPNLFLGMQHLQM-NNVNLAEEYLLASYQI 462 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------LAK 202 T + L L A+ Y +ALD + ++ + + + Sbjct: 463 CNTDPLLLNELGVIKYHKNSLQKAESYLQEALDAAKYLNSDSQIWISIHCNLGHVYRRSN 522 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + +A+ LNQ K +RN + +L + L GD + + ++L L +A Sbjct: 523 QPYKALDCLNQAFK---LSHRNDSNILSSMGLLYLKLGDTSKAINVLHDALALSPADPVA 579 Query: 263 SICAAKSLISQNKKR 277 S ++L S Sbjct: 580 SDLLKRALESNKDVS 594 >gi|260787465|ref|XP_002588773.1| hypothetical protein BRAFLDRAFT_89799 [Branchiostoma floridae] gi|229273943|gb|EEN44784.1| hypothetical protein BRAFLDRAFT_89799 [Branchiostoma floridae] Length = 1713 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 21/156 (13%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A RY AL+I A W+ + + + +A+ + + K + + A Sbjct: 836 GDERQAIRYYENALEIYTYATWIR--LGEHRQAISHYEQALQ-MYRSIKGQNSAHLHIAS 892 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLC----------DNSIMASICAAKSLISQNKKR 277 LI GD I E+LK+ + + R Sbjct: 893 SLIGLGGATLVLGDYIKGISYIEEALKMLMSIHGQSIAHPHIAPILNFLGLACGKVGDHR 952 Query: 278 KAEVILEKIW--------KVNPHPEIANIYTHLLSE 305 KA + + HP+IA L E Sbjct: 953 KATRCFRQALQMYRTIHGQTAAHPQIALSLRGLAGE 988 >gi|188533762|ref|YP_001907559.1| tetratricopeptide repeat protein [Erwinia tasmaniensis Et1/99] gi|188028804|emb|CAO96666.1| Predicted N-acetylglucosaminyl transferase, similar to conserved hypothetical protein YciM [Erwinia tasmaniensis Et1/99] Length = 389 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 9/161 (5%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A++ + +D + Sbjct: 83 GEVDRAIRIHQALMESASLTYDQRLLAVQQLGRDYMAAGFYDRAEQMFGQLVDETDFRVG 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 + ++ + +W AI + K K+ + A +L+ D+ + Sbjct: 143 ALQQLLIIHQATSDWLNAIETAERLVKLGKDRLKMEIAHFYCELALQAMGSDDLERAMGL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEK 285 + NS SI + +++ + KA + ++E+ Sbjct: 203 LKKGESADKNSARVSIMMGRIYMAKAEYAKAVQHLQRVIEQ 243 >gi|119497099|ref|XP_001265316.1| UDP-N-acetylglucosaminyltransferase [Neosartorya fischeri NRRL 181] gi|119413478|gb|EAW23419.1| UDP-N-acetylglucosaminyltransferase [Neosartorya fischeri NRRL 181] Length = 1661 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 13/153 (8%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y+ A ++ AT A+ +L + A ++ +A+ + P E Sbjct: 567 GDYHKAMRWYSRIIARDATHVEAISNLAATLLALDRREEALQHWLRAVKLRPSFFEAVEH 626 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD----MIASYHDA 249 ++ + A+ ++ + + + + E D + SY A Sbjct: 627 LIGLLCSSHRGKEAVNIIDYVQNSLRFPKNGDCFTTDEHASETESDADSGASSVGSYEKA 686 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 S D+ +SLI K +A + Sbjct: 687 --SFDYDDDF-------GRSLIGNRKPSEASAV 710 >gi|262197748|ref|YP_003268957.1| hypothetical protein Hoch_4573 [Haliangium ochraceum DSM 14365] gi|262081095|gb|ACY17064.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 3590 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 4/176 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ--IPATREFAVYSLY 161 R + SY +E Q+ +++A + + +++ +++ A+Y Sbjct: 2688 RAIESYKDALTFDPDEPSALDALGQLYEKISDWDMAIDAMSQLVRITDSPSKQVALYHRI 2747 Query: 162 --FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + + D + +AL I E +V+ Y +W +A + + + + Sbjct: 2748 GRVYASELHDYEQGEAQFLRALSIDTTHVPTMEELVRLYSERGDWLKAAQMMVRAENHTD 2807 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 +L A + + D S + L + A+ A + + Sbjct: 2808 SVLDKIRLLYQAARIYLDELRDREQSKQYLAAVIALDPEHVGAAEPLADIYFREEQ 2863 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 6/165 (3%) Query: 127 VQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFES--CRIGDLNSAQRYATKAL 181 ++ +++++ E M PATR +Y E ++ D + A AL Sbjct: 2639 ARLYRQDQKWDPLIETYRNHIMAASDPATR-IELYCAMGEVYDEQLEDPDRAIESYKDAL 2697 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 PD P +A+ Q Y +W AI ++Q + ++ A+ + ++ D Sbjct: 2698 TFDPDEPSALDALGQLYEKISDWDMAIDAMSQLVRITDSPSKQVALYHRIGRVYASELHD 2757 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +L + + + + KA ++ + Sbjct: 2758 YEQGEAQFLRALSIDTTHVPTMEELVRLYSERGDWLKAAQMMVRA 2802 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 92/318 (28%), Gaps = 47/318 (14%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 MH + E L+ L E +I E + A + E+ + Sbjct: 305 MHLLEVYEKRRDWEKLIGLREREIEGIEDPLDRAEKTYEVAK--------------LAAT 350 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+ + K L P + + Y +K W + ++ A + Sbjct: 351 RVKKPEVCIHWWEKVLATDPAHEEAIGELYKLYERSKSWEKLAEICEKQANIAPDEKTQA 410 Query: 226 AILLIARSLENADKGDMIASYHDAIE------SLKLCDNSIMASICAAK-------SLIS 272 L L D + H + +++ A K S Sbjct: 411 DSLQKLGLLYTDKIEDTDKAIHAWRRLLLLDNENRRAQDALKKLYIANKDWTALEDFYRS 470 Query: 273 QNKKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGKLKRALRLEEINKESV 325 Q K + +LE+ + + IA Y + ++ ++ ++ +++ ++ Sbjct: 471 QGKLDEFVRVLERQVEAGDEEDRLPLAMKIAVTYRDEIEKSDRA-MRAFEKVLSLDENNL 529 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMK------IAPRKEIFLL--LAQIEQANSHNTDK 377 E+ ++ + + + K + ++ P + LA+ + + Sbjct: 530 EA----AEALIPIYEEGRDPRKLVRVLEIQLEQTEEPELRVARTKQLAEYSEEKLRDKGA 585 Query: 378 ILYWTQSALHAMPDPLWI 395 W A W+ Sbjct: 586 AFGWYLKAHEGEHRAEWV 603 >gi|222529576|ref|YP_002573458.1| tetratricopeptide repeat-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456423|gb|ACM60685.1| Tetratricopeptide TPR_2 repeat protein [Caldicellulosiruptor bescii DSM 6725] Length = 294 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 7/202 (3%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L G+ A+ L P + + + +A + + K Sbjct: 3 RDLVLHYLESGNYKKAREVIQNILQEDPLNAEAYIQLSAIELESGNLKKAEDYAKEALKI 62 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A+L + D + +++LK+ + + C ++ LI Sbjct: 63 DSNNKVAWAVL----GQIYHHQKDYSQAERCYLQALKIDNVYVEVLACYSELLIETGFIE 118 Query: 278 KAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 K IL+ + P ++ + +L + N K +L + + ++ Sbjct: 119 KGLEILKYAKSLEPTNDLILENEFFVNLYNRNFEKANKTIKKLFTSSSKIGSIYKLLVLY 178 Query: 335 ALEMGSIDQAHAKAMLAMKIAP 356 + G+ +A+ A LA + P Sbjct: 179 EVNRGNFKKAYNYAKLAWQEYP 200 >gi|158261713|dbj|BAF83034.1| unnamed protein product [Homo sapiens] Length = 741 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568 >gi|124005768|ref|ZP_01690607.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123988836|gb|EAY28442.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 631 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 46/155 (29%), Gaps = 18/155 (11%) Query: 126 EVQIALAERQYNIAHEKLEMMLQ-----IPATREF--AVYSLY--FESCRIGD--LNSAQ 174 L + A E + ++ PA + Y ++ D A Sbjct: 470 MGMAYLMKGDNAKAEESFKKAVEIGAGDNPAMTGLLNGIKGYYAIQQATSRDDGKYKEAY 529 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 A P+ + + A ++ +A N K A A ++ Sbjct: 530 ELLASAASTVPNY---FNKGLAYLLEANDYEQAKASFNAAAKMND----KDATTFYALAV 582 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 A +G+ + ++++L + ++ A+ Sbjct: 583 VAARQGNEGELTQNLKKAVELKSDLKAKALKDAEF 617 >gi|328882730|emb|CCA55969.1| putative secreted protein [Streptomyces venezuelae ATCC 10712] Length = 492 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 58/194 (29%), Gaps = 7/194 (3%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIAL-----AERQYNIAHEKLEMMLQIPATREFAVYSL 160 ++ L+ Q+AL A + A E E + + R A L Sbjct: 106 RAERALRRSLAERPAARGNLDAQLALGALAGARGDWKSAKEWGEKVRKADPKRWPAYPVL 165 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 +GD +AQ+ ++ A Q + W E Sbjct: 166 MDAYNGLGDYAAAQKAMETLEELHSGA--AVRTRASQTFRDRGWREDADAAALDAAALAE 223 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +A L ++G+ + +L+L + + A++L + + +A Sbjct: 224 TDAEKAASLARLGDLAWERGEPEEALGRYGTALRLVPDHGPSLAGRARALTALGRTDEAL 283 Query: 281 VILEKIWKVNPHPE 294 P PE Sbjct: 284 RDWRAALARLPLPE 297 >gi|322492925|emb|CBZ28206.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1409 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 27/204 (13%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRN 224 D A +A + P V E V +V + ++++ + A E + Sbjct: 952 DPELAATLYERAAAVCPTYLEVAEVVADVFVQSGDYAKGSVYMKRVMRANPSAATEMHMR 1011 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVI 282 A L + + G + ++ L + + + A+ A L + N + Sbjct: 1012 LARLGTGSAWDTMSHGQRMEVMEHLLKGLGVAPDRVAAAFAAGVQSHLTNANDTNVVVSL 1071 Query: 283 LEKIWKVNPHPEIANIYTHLLSENT--------------VGKLKRALRLEEIN-KESVES 327 P + + SE+ L R R + Sbjct: 1072 GNLA------PLLLDGVATATSEDAVCFATYVVQTRFQEPQLLNRMYRRALLRFPHHATI 1125 Query: 328 LVIVSKIALEMGSIDQAHAKAMLA 351 LV + + + G A A Sbjct: 1126 LVNYATLCMHSGCHTLARKYIAKA 1149 >gi|291229366|ref|XP_002734654.1| PREDICTED: solute carrier family 16, member 3-like [Saccoglossus kowalevskii] Length = 502 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 11/96 (11%) Query: 8 FFVISLVICSFIIVSHYPEDVSITW-GNRLYRTSPFVILSI--LYFFLFAWILLFAVSRF 64 + + +S+ S+T+ G + S FV + F + +L V Sbjct: 64 VAISLCMGPIAAALSNRFSHRSVTFIGGVITSMSLFVSAFAPNIAFITVTYGVLVGVGHG 123 Query: 65 FLSCPAM--LFHMLHKRNYDKGYKALYTGLMSIAAH 98 P+ + +R A+ G+ ++ + Sbjct: 124 LARTPSAAMVGRYFKRRY------AIANGIAAVGSG 153 >gi|298528185|ref|ZP_07015589.1| response regulator receiver protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511837|gb|EFI35739.1| response regulator receiver protein [Desulfonatronospira thiodismutans ASO3-1] Length = 449 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 69/197 (35%), Gaps = 19/197 (9%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSLYFESC 165 + + ++E + L L A + + Q+ R+ ++ + Sbjct: 245 KKLDKLSPLNHERKIDL--GDTYLRMDNEEEAKANFDQAIRQVQKQARDLISSTIMQIAR 302 Query: 166 RIGD--LNSAQRYATKALD-----ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 ++ D + + +Y KA++ +S + W+ + +W AI + +Q K A Sbjct: 303 KVRDERPDLSSQYVAKAIEHKGSALSREDIWMFNEIGISLRQQGKWEEAIGYYSQGLKIA 362 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI----MASICAAKSLISQN 274 L + A + + +++++ + + AK + N Sbjct: 363 P----MDGGLYYNVGMAYAQGKQYYKALENFQKAVEVSPELVDQYSSVAFNMAKVYQALN 418 Query: 275 KKRKAEVILEKIWKVNP 291 + A L+K +V+P Sbjct: 419 RPGDAVKYLKKALEVDP 435 >gi|125598900|gb|EAZ38476.1| hypothetical protein OsJ_22864 [Oryza sativa Japonica Group] Length = 955 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDA 249 A + + + WS+AI L+ + NRA L D + Sbjct: 6 AELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALE-- 63 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L + A + K+L + K+ +A + E+ Sbjct: 64 -----LDPALLQAYVLKGKALSALGKREEALAVWEQ 94 >gi|119629448|gb|EAX09043.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_d [Homo sapiens] Length = 741 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568 >gi|118766328|ref|NP_001073137.1| transmembrane and TPR repeat-containing protein 4 isoform 2 [Homo sapiens] gi|134035049|sp|Q5T4D3|TMTC4_HUMAN RecName: Full=Transmembrane and TPR repeat-containing protein 4 gi|117644870|emb|CAL37901.1| hypothetical protein [synthetic construct] gi|306921601|dbj|BAJ17880.1| transmembrane and tetratricopeptide repeat containing 4 [synthetic construct] Length = 741 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 460 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 515 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 516 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 568 >gi|72092893|ref|XP_788690.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115958483|ref|XP_001188894.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 569 Score = 41.8 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 10/233 (4%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L+E + A E +++ A ++L G+L+SA+ +AL+I P Sbjct: 254 TLLSEDEPERAAEYFREAIKLNPHHAKAYFNLANIYNNRGELDSAEALFLRALEIDPQYM 313 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 V + + A F Q + + A L + K D + + Sbjct: 314 NVLNHLASLKQRQGDVPAAEAFYRQGLEQVEPS----ADLHNNYAAFLMGKDDYQVALYH 369 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI--WKVNPHP--EIANIYTHLLS 304 + L+L ++A A+ L N+ +AE + + + N +A IY + + Sbjct: 370 CGKCLELEPTHVVAMTNKARVLRHLNRTGEAEDMYIRALSYSNNAKTLQSLAAIYYN--T 427 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L+ + +++ + +++ +G A A++ P Sbjct: 428 DRPTQALETYKEALVLEPLNLDIQLQYAQVMTRLGLYKDAELYLSEAVQTKPT 480 >gi|327307674|ref|XP_003238528.1| DnaJ and TPR domain-containing protein [Trichophyton rubrum CBS 118892] gi|326458784|gb|EGD84237.1| DnaJ and TPR domain-containing protein [Trichophyton rubrum CBS 118892] Length = 731 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199 Q P Y + GD + A ++ +AL + PD+ + + + Sbjct: 422 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 477 Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 A+++ AI + + + LL R+ + + + + D +L+ Sbjct: 478 NAAFKARKYREAIDLYTKGLEVDPNNRDINSKLLQNRAQAHININEYDKAIKDCTSALEF 537 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + I A AK+ +A L+ I + NP Sbjct: 538 DPSYIKARRVRAKANGGAGNWDEALKELKDIAESNP 573 >gi|320162153|ref|YP_004175378.1| hypothetical protein ANT_27520 [Anaerolinea thermophila UNI-1] gi|319996007|dbj|BAJ64778.1| hypothetical protein ANT_27520 [Anaerolinea thermophila UNI-1] Length = 641 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 81/233 (34%), Gaps = 33/233 (14%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L F+SC D A+ +A+D+ P A ++ ++ A L Q Sbjct: 91 GLLFQSCAAFDP--ARNALERAVDLFPSA-EARFSLGNLLRELGLFADARPLLEQALVED 147 Query: 219 KEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAA------- 267 ++ RA++ L +L ++G + + A ++L L ++I ++ A Sbjct: 148 RQNGTPRAVIRDLDGLTLLALEQGKLEEALPWAEQALALAQSAIPEKDALLATVWLNYGT 207 Query: 268 ------KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKR 313 + + ++ R+A + E+ W+ HP A L ++R Sbjct: 208 VLRDMNRLVEAEQAHRRALALDER-WRGAEHPATARDAVELSGTLLEMGRIHEARDLVER 266 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 A L E V + +G I + + A ++ + A Sbjct: 267 A--LSMDRACYGERHPAVGRDLAHLGEILRVRNALIEA--RQATQQALEIFAD 315 >gi|258544287|ref|ZP_05704521.1| tetratricopeptide repeat protein [Cardiobacterium hominis ATCC 15826] gi|258520467|gb|EEV89326.1| tetratricopeptide repeat protein [Cardiobacterium hominis ATCC 15826] Length = 376 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 17/193 (8%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-RN 224 G + AQ L A V A+ Y K+W A+ Q + + Sbjct: 118 AAGMYSQAQALFETLLAAQYRAAEVMPALAHLYERTKQWQAALKLSEQWQAQGYGARGKE 177 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + + D + A A+ + + C + A+ + + Q + A L+ Sbjct: 178 ISHYYCELAQQAGDDASVAAYLQQALVADRDC---VRANRMRGQLYLRQGEYVNAIHALQ 234 Query: 285 KIWKVNPH------PEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 I + + PEIA Y + S+ G L++ + N + ++ L Sbjct: 235 SIGEQSAALLPDVLPEIAEAYRAIGRSDEYRGWLEKVEA-QTKNP-----RLTLALAQLL 288 Query: 338 MGSIDQAHAKAML 350 + A A + Sbjct: 289 NDTSPDAAADLLQ 301 >gi|254445427|ref|ZP_05058903.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198259735|gb|EDY84043.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 568 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 62/201 (30%), Gaps = 14/201 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G + +AL ++P + + Y + A+ L + Sbjct: 353 LKRGLRDEGVELLQQALALAPAHISANRTLAKLYWEEGKKEAALDQLEMLRTLQPTDFAT 412 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 R L +KGD A+ E+ ++ + A SL+ Q + E E Sbjct: 413 RMTLGNYY----LEKGDFEAAIAVVEEARRIDPENTDIRNLLALSLMRQGNEEAREGAFE 468 Query: 285 KIWKVNPHPEIANIYTH---LLSENTVGKLKRA-------LRLEEINKESVESLVIVSKI 334 K V A+ L + +KR L E E V + I Sbjct: 469 KAVAVYSRAIEADASLEEAYLNKVKVLMHIKRFADAEGVVRALMERRPEDPVLSVSLGDI 528 Query: 335 ALEMGSIDQAHAKAMLAMKIA 355 L G+ A A +++A Sbjct: 529 QLAAGNASGARATWETGLELA 549 Score = 38.4 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 5/159 (3%) Query: 136 YNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A E + + A Y L + + GDL +A+R K++ ++PD+ Sbjct: 70 YAEAEVCYLESISRSDEDAAVAHYLLADIAKQEGDLAAAKRSLAKSIALAPDSLPALLDY 129 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + + A N+ K + + L+ + + + + K Sbjct: 130 AEVTAKSGDVQAASALYNRVLKKNVDNPK----ALLELARFEMLQNRPEEALPLLLRIAK 185 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 N I + L + ++ KA +I +I + P P Sbjct: 186 RDPNYIDGITLLTQVLDTLGEREKASMIRSEISRRKPAP 224 Score = 36.5 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 52/134 (38%), Gaps = 3/134 (2%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ + +GD+ A+ +S+ L +S+ A + A+ + A + + Sbjct: 89 AVAHYLLADIAKQEGDLAAAKRSLAKSIALAPDSLPALLDYAEVTAKSGDVQAASALYNR 148 Query: 286 IWKV---NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + K NP + +L L LR+ + + ++ + +++++ +G + Sbjct: 149 VLKKNVDNPKALLELARFEMLQNRPEEALPLLLRIAKRDPNYIDGITLLTQVLDTLGERE 208 Query: 343 QAHAKAMLAMKIAP 356 +A + P Sbjct: 209 KASMIRSEISRRKP 222 >gi|220907546|ref|YP_002482857.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 373 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 12/212 (5%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--ML 147 G + + + N+ A + Y + NE Y + I L A L Sbjct: 125 RGSIQLESGNLQGA--LADYNQVIRLYPNEANAYFIRGAIQLQLDNLQGAIADFNRGIKL 182 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + + + G+ A + + +SP+ P + A Sbjct: 183 NPNEAKAYFIRGTIQAGL--GNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGA 240 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I +Q + + + R A GD+ + D +++KL + Sbjct: 241 IADYDQVIRLSPNCH----CAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARG 296 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + ++ A + K+N PE+A Y Sbjct: 297 NAHDELGNRQAAIADYNQAIKLN--PELAEAY 326 Score = 37.2 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 4/133 (3%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 D A +A+ ++P+ + AI L+Q K Sbjct: 56 GQAKAKYAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAIADLDQGIKLN 115 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 N A R + G++ + D + ++L N A + + + Sbjct: 116 P----NNASAYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQG 171 Query: 279 AEVILEKIWKVNP 291 A + K+NP Sbjct: 172 AIADFNRGIKLNP 184 >gi|149177146|ref|ZP_01855753.1| hypothetical protein PM8797T_27100 [Planctomyces maris DSM 8797] gi|148844038|gb|EDL58394.1| hypothetical protein PM8797T_27100 [Planctomyces maris DSM 8797] Length = 967 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 83/277 (29%), Gaps = 70/277 (25%) Query: 150 PATREFAVYSLYF---ESCRIGDLNSAQRYATKAL----DISPDAPWV----TEAVVQQY 198 T V L E + G ++ +A +I+P + +++ Sbjct: 18 EKTDSLDVKELLKSAYEHQQHGRYEESREVYDQAAKQLGEITPQTAEANLKLQQGLIELD 77 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 L + S AI L K + + +L + + G+ ++ +L L + Sbjct: 78 RLTGKTSAAIKRLEAAIKQTPD----QPLLHAVGARLTYETGEYNKAHQYVARALALDSD 133 Query: 259 SIMASICAAKSLISQNKKRK-------------------AEVILEKI--------W---- 287 +A + A L K + AE +L+ W Sbjct: 134 QPLAHLIQAHLLTDAGKINEANEGYRWFVRYYNRAQPEDAETLLQIAEGATQYARWNSVS 193 Query: 288 ---------------KVNPHPEIANIYTHLLSENTVGKLKR------ALRLEEINKESVE 326 K +P +A +++ K R +IN + E Sbjct: 194 QIFTFVINTVCPDALKADP---LAWQASYISGSILQEKYNRPQAADEFTAALKINPRAAE 250 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 V ++ A+E D A A++I PR LL Sbjct: 251 VYVALAFSAIESHDFDLAVKMINRALEINPRSIDALL 287 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 28/271 (10%), Positives = 72/271 (26%), Gaps = 48/271 (17%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESC-RIGDLNSAQRYATKALDISP 185 A + + + + + + A+ Y + A+ A L +P Sbjct: 692 TASLKGYRTESTRSFKELQKDYEADQKNLALAGEYAANLLSRRKKQEARELAQSVLSRNP 751 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P + + +L+++ A+ + K + LL + + Sbjct: 752 AQPQAALTIARLELLSEDLPAALAIMQPALKAKTD----DVELLGLAGKILLKQKQYPEA 807 Query: 246 YHDAIESLKLCD---NSIMASICAAKSLISQNKKRKA----------------------- 279 + K + + L +K+++A Sbjct: 808 LAIYEAAHKKYPYKTEWLQGLAIIYRHLTEDHKQKEALLKLVHLDPTDVDSMQELMYLYQ 867 Query: 280 -------------EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + + H +A L + R L +++ ++ E Sbjct: 868 SEGDLKETLHWGQAALQIDVLDPETHECLAETALKLKQPELAIREYRV--LLQLDGKNTE 925 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ E G +A + +K+ P Sbjct: 926 ARYQLANALFESGKKQEAETEVEQLLKLNPD 956 >gi|86156853|ref|YP_463638.1| zinc finger/thioredoxin [Anaeromyxobacter dehalogenans 2CP-C] gi|85773364|gb|ABC80201.1| zinc finger/thioredoxin putative [Anaeromyxobacter dehalogenans 2CP-C] Length = 1139 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 6/201 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G +++A ++P AR + + + ++ AE A L + Sbjct: 756 GRLALARGDLPAAR--EALAQAVEKGPRDPAAHAALGELRAAEGDAAGAEAAFRAALALD 813 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A AV L + GD+ A+ +AL + P + A+ A++ + Sbjct: 814 AEHAAAVLGLARLAQARGDVAGARAGLVRALALEPRSAEAQLALGTLEWSARD----LEK 869 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + A L ++GD A+ + + A + ++L Sbjct: 870 ADAALAAAVDLQPRNAAALTRLGAVKLERGDAEAAVKLLGAATSEAPGAADAQLWFGRAL 929 Query: 271 ISQNKKRKAEVILEKIWKVNP 291 +++ + A V L K ++P Sbjct: 930 LARGETPAALVRLRKAVDLSP 950 Score = 39.1 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 22/280 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G ++A + A + + + AL + A LE + Sbjct: 511 GEAALARGDAVKAAAAFQRLGGLEQGPRAPMGL---ARAALLRGKPEEARSVLEKVAAAD 567 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A A L + GD++ A+ ++P + + A+ Sbjct: 568 AAYLPARLELAALAEAAGDVDGART------QLAPVLADAAQPRLAPLERARARMVEAAL 621 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI------ 264 L++ A + + L A A + ++ ++ S + Sbjct: 622 LDRSAATAADAEKALLAALEADPRLAAARAALVRQRLRRGDAAGAVAASDPVAAEAASDP 681 Query: 265 ----CAAKSLISQNKKRKAEVILEKIWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRL 317 ++L + A + ++ V P P + A + Sbjct: 682 ALAAARVRALALAGRALDAARLADQALGVAPGTPALLVAKAVALSAAGKPQEAAAAYAEA 741 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + +VE V + ++AL G + A A++ PR Sbjct: 742 LARDAGAVEPRVALGRLALARGDLPAAREALAQAVEKGPR 781 >gi|66524297|ref|XP_393964.2| PREDICTED: transmembrane and TPR repeat-containing protein CG4050-like isoform 1 [Apis mellifera] Length = 996 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 27/240 (11%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ P+ Sbjct: 578 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 633 Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++Q+ A+ A L + + K+ N R + + D D ++ Sbjct: 634 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 689 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299 ++ L ++ A A L + + +A L + V HP+ + +IY Sbjct: 690 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 747 Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ + R R+ +++ +++ L + + +E G + A A +AP + Sbjct: 748 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLERAAALAPHQ 805 >gi|332139991|ref|YP_004425729.1| Thioredoxin domain-containing protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550013|gb|AEA96731.1| Thioredoxin domain-containing protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 289 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 11/148 (7%) Query: 140 HEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 +++ ML P A ++ + G+ A A +AL ++PD ++ Sbjct: 106 EQQIREMLTKYLPNPEDELLATAG---KAIQQGEYAEALPAAKEALSLNPDNVNAKYMLI 162 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Y+ A L K + +R +++ E A I A+E+ Sbjct: 163 DCYIETGSIDTAKALLE-DIKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVIL 283 I A L NK + A +L Sbjct: 222 DLQL---KIDLAIQLQQANKAQDALALL 246 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 291 PHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+PE +A + L A +N ++V + ++ +E GSID A A Sbjct: 118 PNPEDELLATAGKAIQQGEYAEALPAAKEALSLNPDNVNAKYMLIDCYIETGSIDTAKAL 177 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +IE A + Q+A+ A PD Sbjct: 178 LEDIKLVDQDSRYKSLAGKIELAEQAADTPEIRQLQAAVEANPD 221 >gi|300122485|emb|CBK23055.2| Tom70 [Blastocystis hominis] Length = 526 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 34/124 (27%), Gaps = 7/124 (5%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A A + + + L + A + E + + RE Sbjct: 233 GAFEAAYADFCEAAKEEAKCSDRSH-ALLEKATFLTLSGDQREARKIFEALFE-AGMREV 290 Query: 156 AVYSLYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + L + +G+ A +A+ P Q ++ E +A L Sbjct: 291 NL--LVKFASCLLELGEETRAHELFDEAVSAFPKEVDAWFHRGQMRLVEGELKKAREDLQ 348 Query: 213 QKKK 216 + K Sbjct: 349 RVVK 352 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 43/148 (29%), Gaps = 13/148 (8%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + A E E L + + G +A +A + A+ Sbjct: 206 KRIEAGEAAEPSLGD----LYLMRGGLR--KSKGAFEAAYADFCEAAKEEAKCSDRSHAL 259 Query: 195 VQ---QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ L+ + A + LL+ + + G+ ++ E Sbjct: 260 LEKATFLTLSGDQREARKIFEALFEAGM----REVNLLVKFASCLLELGEETRAHELFDE 315 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKA 279 ++ + A + + + + +KA Sbjct: 316 AVSAFPKEVDAWFHRGQMRLVEGELKKA 343 >gi|317046355|ref|YP_004114003.1| cellulose synthase operon C domain-containing protein [Pantoea sp. At-9b] gi|316947972|gb|ADU67447.1| cellulose synthase operon C domain protein [Pantoea sp. At-9b] Length = 1163 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 7/199 (3%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL + N A + I + +A+ L + D A+RY AL I Sbjct: 368 ALKKGDLNGAERQYRNAQAIDNSDSWALIGLGDVAQARHDPAQAERYWQLALRIDRGNTT 427 Query: 190 VTEAV--VQQYVLAKEWSRAITFLNQKKKNA--KEWNRNRAILLIARSLENADKGDMIAS 245 + + Q I L ++ R+ L A + A++G + Sbjct: 428 AVRRLAGLYQQQSPARAMAFINALPAAQQRGLADTLRTLRSDSLRAEADALAEQGQWHQA 487 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYT--HL 302 ++ + + I S A +L + + ++E + + +P P + Sbjct: 488 VVKYRQAAQDTPDDIWLSYRLAGALRNSGDAAQGRAVMESMVRQHPQEPSALYAWALWLS 547 Query: 303 LSENTVGKLKRALRLEEIN 321 + L RL + Sbjct: 548 SGDEDDAALAALNRLPQAR 566 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 99/326 (30%), Gaps = 55/326 (16%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + A+ G ++ ++ A + + + L+ L +A A A + Sbjct: 359 WLAINNGDNALKKGDLNGAERQYRNAQAIDNSDSWALIGL--GDVAQARHDPAQAERYWQ 416 Query: 145 MMLQIPATREFAVY---SLYFE---------------SCRIGDLNSAQR-----YATKAL 181 + L+I AV LY + + + G ++ + +A Sbjct: 417 LALRIDRGNTTAVRRLAGLYQQQSPARAMAFINALPAAQQRGLADTLRTLRSDSLRAEAD 476 Query: 182 DISPDAPWVTEAVVQQYVLAKE-----WSRAITFLNQKKKNAKEWNRNRAIL-------- 228 ++ W +AVV+ A++ W L +N+ + + RA++ Sbjct: 477 ALAEQGQW-HQAVVKYRQAAQDTPDDIWLSYR--LAGALRNSGDAAQGRAVMESMVRQHP 533 Query: 229 ----LIARSLENADKGDMIASYHDAI----ES------LKLCDNSIMASICAAKSLISQN 274 + GD + A+ ++ +L D + A + + Sbjct: 534 QEPSALYAWALWLSSGDEDDAALAALNRLPQARWDDNMHELADRLNQQKVFARANALRDG 593 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 A + L + +P +I L + L + + + + ++ + + Sbjct: 594 GNAAAAIALLQQQPASPRRDITLADWALERGDARSALAGYQHVLKQDAHNNDAALGRIEA 653 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEI 360 L + +A + I Sbjct: 654 LLALKRPQEARQALQSLPDSVAEESI 679 >gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia] Length = 815 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 10/169 (5%) Query: 133 ERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + + + A + + L T + + F ++G+ A + A+ ++P+ Sbjct: 87 QGEKDKAIQDYNTVIKLNENNTNAYINRGILF--KQLGEHEKALQDYNMAIKLNPNDADA 144 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + +A+ N K N A R + KG+ + D Sbjct: 145 FNNLGNLLDDQGQKDKALQNFNTAIKLNP----NDATAYYNRGVVFKQKGEKEKALEDFN 200 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 ++K N I A I Q +K KA K+N P A Y Sbjct: 201 MAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLN--PNYATAY 247 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 76/226 (33%), Gaps = 7/226 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + +++ Y+ C +G+ A + + ++P+ + Sbjct: 326 GETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQN 385 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Y E A+ + K + A R + ++G + + D ++ Sbjct: 386 RGVLYGEQGEIENALKDFDMAIKLNPNY----ATAYQNRGVLFGEQGQIENALTDFDIAI 441 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGK 310 KL A + +K KA K+NP+ +IA L V Sbjct: 442 KLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQA 501 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L+ + ++N + + E G I++A +A+K+ P Sbjct: 502 LQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNP 547 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 24/154 (15%) Query: 158 YS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAK----EWSRAIT 209 LY E G++ A + A+ ++P+ + + +Q + +++ AI Sbjct: 522 RGVLYGE---QGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIK 578 Query: 210 F----LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 + K+ + + +L + G+ + D ++KL N A Sbjct: 579 LNPNYATAYQNRGKQSSSRKGVLYKQQ-------GEKEKALQDYHTAIKLNPNFATAYYN 631 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 Q +K KA + ++N P A Y Sbjct: 632 RGVLFGEQGEKEKALQDYNEAIQLN--PNYATAY 663 >gi|88799828|ref|ZP_01115401.1| putative regulatory protein [Reinekea sp. MED297] gi|88777408|gb|EAR08610.1| putative regulatory protein [Reinekea sp. MED297] Length = 508 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 43/132 (32%), Gaps = 7/132 (5%) Query: 160 LYFESCRI-----GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 LY + GD ++ A KA + V + + + +A+ +Q Sbjct: 314 LYLAASAEVLYQCGDKTHGRQLAEKAHGQMSHPAATLKTVGKIHAFEGRFDQALDCYDQA 373 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK-LCDNSIMASICAAKSLISQ 273 +LL +++ + +A +++K L +I + + Sbjct: 374 IAMIPNGGTYHYMLLTLKAI-LFKANREHDALSEAFQAMKMLEPKLSKRAILSLMLYDGE 432 Query: 274 NKKRKAEVILEK 285 K AE L K Sbjct: 433 RKMTFAERTLLK 444 >gi|253702409|ref|YP_003023598.1| glycosyl transferase family 2 [Geobacter sp. M21] gi|251777259|gb|ACT19840.1| glycosyl transferase family 2 [Geobacter sp. M21] Length = 1523 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 9/136 (6%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + + R ++ + + + SP +P A+ A +W A+ L Q Sbjct: 882 LRG-AKFARRGKLNDAVELMLQEGIRFSPASPAPYLALAGILCEAGKWREALEVLEQ--- 937 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI-CAAKSLISQNK 275 + A L+ R+ + + G+ + A E+ + ++ + Q + Sbjct: 938 -VPAGSELAAALMRGRAFK--ESGEPTQTMEAAGEAEAIDPE-APGTLHLKGVLALWQGE 993 Query: 276 KRKAEVILEKIWKVNP 291 + E +L + ++P Sbjct: 994 TERGEELLRRAIALDP 1009 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 E+A T L +L RL +++ E+ E+ + + L G +A A+ + Sbjct: 1357 ELARQATELNRGEEAQRL--WHRLLQVHPENAEAYFNLGYLQLCAGEYPKARESALKGAQ 1414 Query: 354 IAP 356 +AP Sbjct: 1415 LAP 1417 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 4/126 (3%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L ++ + AQR + L + P+ + + A E+ +A K A+ Sbjct: 1358 LARQATELNRGEEAQRLWHRLLQVHPENAEAYFNLGYLQLCAGEYPKAR---ESALKGAQ 1414 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + + G+ + E L+ + A + L+ Q +K +A Sbjct: 1415 LAPGMKE-AAFNLAKCELFLGNTEKARESCREMLEKWPDYPPALSLSCVCLLLQGEKAQA 1473 Query: 280 EVILEK 285 + +L++ Sbjct: 1474 QHLLQR 1479 >gi|239942030|ref|ZP_04693967.1| hypothetical protein SrosN15_13607 [Streptomyces roseosporus NRRL 15998] gi|291445477|ref|ZP_06584867.1| TPR repeat-containing protein [Streptomyces roseosporus NRRL 15998] gi|291348424|gb|EFE75328.1| TPR repeat-containing protein [Streptomyces roseosporus NRRL 15998] Length = 424 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 81/265 (30%), Gaps = 13/265 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 P A + T + + + + A + + E A Sbjct: 149 GPRPTAALGLLLTRAELTDRDRAAALVARAWDRFRAGELDAALSDHGRAVAVDPRSERAH 208 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +G A +A +I+P W + Y A+T L++ Sbjct: 209 QGRAVILRSLGRHEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRA--- 265 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + A+ L +R L G + D ++ L A + ++ Sbjct: 266 -HALDPSDAVPLGSRGLVRHALGRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPV 324 Query: 278 KAEVILEKIWKVNPHP-----EIANIY-THLLSENTVGKLKRALRLEEINKESVESLVIV 331 A L++ ++NP E +Y E V RAL L + E + Sbjct: 325 GALADLDRAEELNPGRAGTEGERGEVYRATGRHEEAVACYGRALAL---DPEYAWAHGSR 381 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356 + +G + +A A A+++ P Sbjct: 382 ALALEALGRLPEARADLDRALELDP 406 >gi|224023687|ref|ZP_03642053.1| hypothetical protein BACCOPRO_00403 [Bacteroides coprophilus DSM 18228] gi|224016909|gb|EEF74921.1| hypothetical protein BACCOPRO_00403 [Bacteroides coprophilus DSM 18228] Length = 482 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 20/212 (9%) Query: 165 CRIGDLNSAQRY---ATKALDISPDAPWVTEAVVQQYVLAKE--WSRAITFLNQKKKNAK 219 + GD+ A +Y A K + P W+ A + A +L ++ Sbjct: 247 MQSGDIEKALKYFLKADKLYNNKPRL-WIVIA----QCYMGLMLFPAAADYLTALLEHPD 301 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRK 278 +A R+L + D A D +E+ ++C + + + QN + Sbjct: 302 IPEYEKAYYYEQRALCSLAICDTEACLKD-LEAGRICDPQFPRLYLTYGEYYLVQNDLKS 360 Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESV-ESLVIVS 332 A+ ++P+ + IA+ + + RLE+ E + E ++ Sbjct: 361 AQTEFAHAEALDPNKDEMLGLIASTLLRYEYIDEAAR--NYARLEKEYPEKIKEYYGYLA 418 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + + + APR+ + ++ Sbjct: 419 FLHYLQDDLQKMTEDIAKGYLQAPRELVAGIM 450 >gi|217978527|ref|YP_002362674.1| peptidase C14 caspase catalytic subunit p20 [Methylocella silvestris BL2] gi|217503903|gb|ACK51312.1| peptidase C14 caspase catalytic subunit p20 [Methylocella silvestris BL2] Length = 778 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 4/120 (3%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G L+ A +AL + P + L+ + A+ LN+ Sbjct: 279 QGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNKALSIDP----RLP 334 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L R + + D E+L++ + + A ++ + KA+ +K Sbjct: 335 VSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVAAYAGRGQAYEKAGQLPKAKADYQKA 394 >gi|195444547|ref|XP_002069917.1| GK11776 [Drosophila willistoni] gi|194166002|gb|EDW80903.1| GK11776 [Drosophila willistoni] Length = 702 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 45/131 (34%), Gaps = 4/131 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++A + A + + E A+ +L G L +A+++ AL++ P Sbjct: 448 ARLATDTGNNSKAFHHYHRAIDLYPAYESALMNLGNLYREHGQLETAEKFIRLALEVYPA 507 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 P + K++S+A+ + + N A+ ++ + Sbjct: 508 FPVAWMNLGIVQSAQKKYSQALASYERALS----YRANYAVCFYNMGNLYLEQQLYAEAL 563 Query: 247 HDAIESLKLCD 257 H ++ L Sbjct: 564 HHWQHAVALNP 574 >gi|53724807|ref|YP_102262.1| TPR domain-containing protein [Burkholderia mallei ATCC 23344] gi|52428230|gb|AAU48823.1| TPR domain protein [Burkholderia mallei ATCC 23344] Length = 626 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 95 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 154 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 155 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 214 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ + H +L L +A A +L ++ + R A Sbjct: 215 HF--VAAHFNLGNALDAI--SQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 270 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 271 LPHYERAVGLDP 282 >gi|32645|emb|CAA27244.1| unnamed protein product [Homo sapiens] Length = 478 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262 + + A+ ++ + KG + ++ +++ +A Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAE 280 + A+ I RKAE Sbjct: 343 HLDLARMYIEAGNHRKAE 360 >gi|301763435|ref|XP_002917148.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13-like [Ailuropoda melanoleuca] Length = 868 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 164 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 223 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 224 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 276 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 277 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 335 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 336 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 393 Query: 360 IFLLL 364 + + Sbjct: 394 VCQYM 398 >gi|298485679|ref|ZP_07003758.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159705|gb|EFI00747.1| tetratricopeptide repeat-containing protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 575 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 93 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 149 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 150 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 208 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 209 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSLKR--YPDDKRLRLTYARMLV 265 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 266 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 315 >gi|289192263|ref|YP_003458204.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] gi|288938713|gb|ADC69468.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] Length = 310 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 66/195 (33%), Gaps = 6/195 (3%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE-FAVYSL-YFESCRIG 168 + Y L+ + ++ + + E +L++ + R+G Sbjct: 64 KALKLKPDYSRAYFLKGVLLMSLGRLKESKEVFLKLLELDKQESNIGAKCITATILMRLG 123 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + + A + + P + + + A+ + E N + Sbjct: 124 EFDEALKILETMFEDYPKSAIAWAEKGEILYSEGKLKEALECFEKAL----EVNPKDYLS 179 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ + + G + + ++ + I A + + LI + +A+ +EK K Sbjct: 180 LLYKGEILFELGKFREALECFEKIIQKNEKDIRALLYVIQILIFLGRITEAKEYIEKALK 239 Query: 289 VNPHPEIANIYTHLL 303 +NP+ + +Y ++ Sbjct: 240 LNPNSSLLYVYYGIV 254 >gi|225871740|ref|YP_002753194.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] gi|225793991|gb|ACO34081.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196] Length = 393 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 23/205 (11%), Positives = 64/205 (31%), Gaps = 13/205 (6%) Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P + V + K+W A + + Sbjct: 191 ALDPQSAQAHMLVGEALDEMKDWIGAEREFRAAIAANP----KEPNVHFGLGYLLWTRSQ 246 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIA 296 + L + +A++ A + + ++K A +L+K ++ P H ++ Sbjct: 247 YPEAATQFEAELANDPGNFLATLYLADTDLRRSKPDDALPLLKKAVRMGPGNAMAHRDLG 306 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ--AHAKAMLAMKI 354 +Y L + + + + + + ++ +MG +D A K + ++ Sbjct: 307 EVYADLNDD--AKAVAEYREAVRLAPKDTNARWRLGRLYRKMGMVDASNAEFKKLQGLQK 364 Query: 355 APRKEIFLLLAQIEQANSHNTDKIL 379 A + + ++++ S Sbjct: 365 AENERLLQVMSEAPDGKSKAAAPAQ 389 >gi|225450597|ref|XP_002277942.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 574 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 23/204 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A + + + NE +L E A + E M + Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE-NVTAAKKVFEEMQRQ------G 329 Query: 157 VY-------SLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEWSRA 207 + SL C G L+ A K + + P+ A++ + K A Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV-TYNALINGFCKKKMLKEA 388 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMASIC 265 L+ K N LI +G++ + A +E L + + +I Sbjct: 389 REMLDDIGKRGLAPNVITFNTLID---GFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 445 Query: 266 AAKSLISQNKKRKAEVILEKIWKV 289 +L + + RKA +L+++++V Sbjct: 446 V-DALCKKGETRKAVRLLDEMFEV 468 >gi|219126404|ref|XP_002183448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405204|gb|EEC45148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 959 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 18/228 (7%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ ++GD + A+R + + +P + + + Y S A L Q ++ Sbjct: 400 KQADQVGDRDLAKRLLQELVVATPHDARLYRRLARMYKEEGNVSAARAILQQGIRDHHAK 459 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N L + + +AD + H +++++ + + A Sbjct: 460 NGYLWHGLGSMATSDAD------AKHYWQKAIEVDPALPHPYHSLGTLEHKEGRIANAMK 513 Query: 282 ILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINK--ESVESLVIVSKI 334 L+K P H + +Y + K R + + ++ + Sbjct: 514 TLQKGVAYCPTSHRLHHALGELYRDAKMLDMAA--KSYHRAIQHGPPVSHGFAFTGLAYV 571 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEI--FLLLAQIEQANSHNTDKILY 380 A E I A A+ + + + ++ LAQ+E++ + D Sbjct: 572 AYERDDIHGARRWLRKAIVLNKGRHVNSWVALAQMEES-IGDIDSARA 618 >gi|87125210|ref|ZP_01081056.1| TPR repeat protein [Synechococcus sp. RS9917] gi|86166979|gb|EAQ68240.1| TPR repeat protein [Synechococcus sp. RS9917] Length = 409 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 56/162 (34%), Gaps = 1/162 (0%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKL 143 Y+ L ++++A + A + + L + L +++ + A + Sbjct: 248 YELLLHLAIALSASDPAAATDAYRQALDLPLDTRLSMGARLNLAALLMQQERLDEAIQLT 307 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 Q Y+L R GD+ +A + +AL ++P+ + + +L + Sbjct: 308 LTATQRAPEVALGWYNLGLMQRRRGDIAAALQAYERALHLNPEHAETHQNLAVARLLGGD 367 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 A + + + R + +E K D + + Sbjct: 368 IDGARSGFREAIALLHQQGRPEEAQALRHQVEGMVKLDEVRA 409 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 9/136 (6%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKSLISQNK 275 R +L +A +L +D +Y A++ L L M + A L+ Q + Sbjct: 241 TNSVSERYELLLHLAIALSASDPAAATDAYRQALD-LPLDTRLSMGARLNLAALLMQQER 299 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVI 330 +A + PE+A + +L + L+ R +N E E+ Sbjct: 300 LDEAIQLTLTA--TQRAPEVALGWYNLGLMQRRRGDIAAALQAYERALHLNPEHAETHQN 357 Query: 331 VSKIALEMGSIDQAHA 346 ++ L G ID A + Sbjct: 358 LAVARLLGGDIDGARS 373 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 15/181 (8%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 + + +G L GL S+ A P A + + LL + IAL+ Sbjct: 213 EGHQGRGLSLLRQGLASLEA--DPNANTPDTNSVSERYE------LLLHLAIALSASDPA 264 Query: 138 IAHEKLEMMLQIP-ATRE-FAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + L +P TR +L + L+ A + A +P+ + Sbjct: 265 AATDAYRQALDLPLDTRLSMGARLNLAALLMQQERLDEAIQLTLTATQRAPEVALGWYNL 324 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + A+ + E L +AR L GD+ + E++ Sbjct: 325 GLMQRRRGDIAAALQAYERALHLNPEHAETHQNLAVARLLG----GDIDGARSGFREAIA 380 Query: 255 L 255 L Sbjct: 381 L 381 >gi|326386623|ref|ZP_08208245.1| tetratricopeptide TPR_4 [Novosphingobium nitrogenifigens DSM 19370] gi|326208938|gb|EGD59733.1| tetratricopeptide TPR_4 [Novosphingobium nitrogenifigens DSM 19370] Length = 308 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 5/108 (4%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 R + R+ G + + ++ +L A + +A Q A+ + Sbjct: 159 QRGAIYADRARALVALGRLDEAGASLTQARRLAPEYAGAFLLSATLARRQKDLVSAQEFI 218 Query: 284 EKIWKVNPH-PEI---ANIYTHLLSENTVGKLKRALRLEEINKESVES 327 E ++NPH P I A + L + + K + + +S E+ Sbjct: 219 ESASRINPHDPAIGLEAGVIAVLAGHDEAAR-KSWSSVVSTSPDSPEA 265 >gi|331224468|ref|XP_003324906.1| pol II transcription elongation factor [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303896|gb|EFP80487.1| pol II transcription elongation factor [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1095 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 13/169 (7%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-----AQRYATKALDISPDAPWV 190 A E + L+ A L ++ R D S + AT A+++S P + Sbjct: 56 TRAAMEYWKRDLKQDAISLAN-QGL--QALRDQDRPSECLPLLCQLATYAINLSRGLPTL 112 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSLENADKGDMIASYH 247 + + A L + E +R + ++L AR+ + + + Sbjct: 113 KLETPEYDTIPPAQPTADETLEKAAHYINEASRIDSRNPLVLDARATLYLAQKNYDQALT 172 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PE 294 E LK + A + A+ L + R A + +++ K+ PH P+ Sbjct: 173 ACEEILKERPTHLPALLGKARVLFHRKFFRPALKLYQQVLKLAPHVLPD 221 >gi|291404400|ref|XP_002718420.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 1-like [Oryctolagus cuniculus] Length = 503 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 67/225 (29%), Gaps = 33/225 (14%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAK-EWSRAITFL 211 C + A+ KAL+ P+ P +T + + S A + Sbjct: 174 GWALLKCGRKNYERAKACFEKALEADPENPEFNTGYAITVYRLDYPAKRPYDVSDAFSL- 232 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 Q + A N A L +L+ D G+ E+L + AAK Sbjct: 233 -QPLRKAIRLNPQDAYLKALLALKLQDLGEEAEGRECMEEALAHTSSQTYVFRYAAKFFR 291 Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANIYTH--------------LLSENTVGKL- 311 Q + +A L++ K P H +I Y V +L Sbjct: 292 RQGRVDEALKYLKRALKATPRSVFLHHQIGLCYREQMIQIKNATHMQPRGRDRENVDRLV 351 Query: 312 ----KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + + V ++++ E+ +A A+ Sbjct: 352 QLAINEFQKASVLKPTFELAHVHLAEMYAEIRQYKEAEEHFQKAL 396 >gi|265751368|ref|ZP_06087431.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263238264|gb|EEZ23714.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 273 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 LNQK +++ +++NR L AR+ + + D E+ KL Sbjct: 167 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 226 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295 + + + +SQ KKR+A V EK ++ P PE+ Sbjct: 227 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 265 >gi|298528424|ref|ZP_07015828.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfonatronospira thiodismutans ASO3-1] gi|298512076|gb|EFI35978.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Desulfonatronospira thiodismutans ASO3-1] Length = 795 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 83/269 (30%), Gaps = 38/269 (14%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + L + ++ A E+ + L A SL R+G L A+++ Sbjct: 561 DSLTLTVSADSLFSQGDTFAALEEYKQALAADENNLLARNSLAICYARLGRLELARQHFQ 620 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + D + + + + A + E + + A L+ + Sbjct: 621 EITDKDSENLMAWYNLGCVCLKQGDSLEAANLFAKCL----EIDSSHAFSLLRLGQLAEN 676 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 D + E+ + D + A + L WK + Sbjct: 677 SADFEKAARCYQEAGQTRDG----AGLAPRHLARL------------AWKQD-------- 712 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ-AHAKAMLAMKIAPR 357 E + L L + + SL +++++ L+ G + A + A ++ + P Sbjct: 713 ----QKEQSREFLH--QALLQ-DPRDAFSLNLMARMYLQSGDDPEIAESLARQSVALRPD 765 Query: 358 KEIFLL-LAQIEQANSHNTDKILYWTQSA 385 F L LA I +A + + A Sbjct: 766 VSEFWLDLADIFKARDKSEQEAQA-RARA 793 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 38/113 (33%), Gaps = 2/113 (1%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + + + A + + + + H L+ L Q+A + A + Q Sbjct: 637 GCVCLKQGDSLEAANLFAKCLEIDSSHAFSLLRL--GQLAENSADFEKAARCYQEAGQTR 694 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 A L + + ++ + +AL P + + + Y+ + + Sbjct: 695 DGAGLAPRHLARLAWKQDQKEQSREFLHQALLQDPRDAFSLNLMARMYLQSGD 747 >gi|225175599|ref|ZP_03729593.1| Tetratricopeptide TPR_2 repeat protein [Dethiobacter alkaliphilus AHT 1] gi|225168928|gb|EEG77728.1| Tetratricopeptide TPR_2 repeat protein [Dethiobacter alkaliphilus AHT 1] Length = 220 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 2/169 (1%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L G+ + + I A S+ N+ + + Q A + + A E + + Sbjct: 40 LQHGIRAYSEGQIDQAFLRFQDASEIR--PNDATTHYMLAQSLEAMGREDEAMEHYQQTI 97 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 ++ + Y+L R DL +A+ +AL + + Y +++ A Sbjct: 98 ELNPAKAAPYYNLAVIYNRRKDLPAAESQLIEALRQQRNFHGARLMLGGIYHEQEKYEEA 157 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + L + +N + + + + L+L Sbjct: 158 VDELQRLLRNRDLERPLEIRARTFLARTYTAMEETQNAREQWQKILQLD 206 >gi|261420022|ref|YP_003253704.1| hypothetical protein GYMC61_2632 [Geobacillus sp. Y412MC61] gi|319766836|ref|YP_004132337.1| hypothetical protein GYMC52_1763 [Geobacillus sp. Y412MC52] gi|261376479|gb|ACX79222.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61] gi|317111702|gb|ADU94194.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp. Y412MC52] Length = 1385 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 75/205 (36%), Gaps = 15/205 (7%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L ++ + +Y A + E L++ + + L G+ + + Sbjct: 905 PLSLFRLAELCASLGRYEEAKQHYEACLKVDPSFVLCHFRLAALYEAEGNEERQHTHLLQ 964 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ ++P ++Q E S + L + +A E ++ + +L D+ Sbjct: 965 AVRLAPK-----RVDMEQLAAIAEPSALLRALADARPHAGEAWYYDSLGYVYGALGRRDQ 1019 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IA 296 ++L L + A L+ + ++++A +LE++ HP+ + Sbjct: 1020 EKA-----AVEKALALDPDHHEVLRHWAMVLMGEGRQKEAVKLLEQLMVR--HPDDEPLY 1072 Query: 297 NIYTHLLSENTVGKLKRALRLEEIN 321 +Y L + G K RLE + Sbjct: 1073 PLYVALFPKTMRGLGKLRHRLERLK 1097 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 16/195 (8%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY-SLYF 162 K + + L + L +IA +Y A LQ P E Y L Sbjct: 545 KAEDVLKRVKGKAQSPLYHYLRGRIAFFASRYEEAARYFRTSLQLDPDQPEVWSYFGLA- 603 Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 S G + + A+ + P V+ + ++ A + ++ + Sbjct: 604 -SAYAGHIEKGLISSRVAVSLYPGDLFIETNHGVLLFHAKR--FAEARAWFDRLVRR--- 657 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R A L R+ + + G + + L + A + KA+ Sbjct: 658 -ERRDAQLWYERARCDRELGRRRKAERGFCVAKALDPQEPYPYLMLADLYDDDGDREKAK 716 Query: 281 VILEK----IWKVNP 291 +LE+ W++ P Sbjct: 717 AVLEEGLAVAWRLAP 731 >gi|30249277|ref|NP_841347.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30180596|emb|CAD85209.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 1165 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 8/132 (6%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 +A A +A+ + + + + A + A+ + + +R + +L Sbjct: 365 ETALASAEEAVRLDSQNALAWARLAELQMSAGKSDHALQSAERAVSLDPDLSRTQTVLGF 424 Query: 231 ARSLEN-ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWK 288 A L+ + + + ++ I A+ I +NK +A I +E Sbjct: 425 AHLLQIDTHRAQVAFARATVLDQADPMPRL---GIGIAR--IRENKL-EAGRIDIETAAS 478 Query: 289 VNPHPEIANIYT 300 ++P + Y Sbjct: 479 LDPANSLIRSYL 490 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 8/165 (4%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + A+ L+ + LI RS G + + D + +L Sbjct: 257 QYRQGKLAEALAELDHLLAEELTVD-----ALILRSELLLTTGRVKEALSDLQRTEQLEP 311 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLKRA 314 + A A + QN+K++A + + + NP +A Y + L A Sbjct: 312 GNSDALALHAMIFVVQNRKQEALALAGQAVRNNPASSAAKLALSYAQQANFQIETALASA 371 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 ++ ++ + ++++ + G D A A A+ + P Sbjct: 372 EEAVRLDSQNALAWARLAELQMSAGKSDHALQSAERAVSLDPDLS 416 >gi|332141544|ref|YP_004427282.1| tetratricopeptide repeat protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327551566|gb|AEA98284.1| tetratricopeptide repeat protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 389 Score = 41.8 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 78/245 (31%), Gaps = 19/245 (7%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + + ++ RE A+ L + + G L A+ + L+ Sbjct: 83 GEIDRAIKVHQNLVSRDELQPAQRENALRELGHDYTQAGFLERAENAFLQLLNSEKHYLV 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASY 246 + + Y KEW RAI + + + A ++ A+ Sbjct: 143 AQQQLFSIYQTTKEWERAIELAEHMVQCHGDNDDVCERLAHFYCEQAAVELKNESQGAAL 202 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIYT 300 +++ ++++ + + Q + A ++ W P + I Sbjct: 203 TLLQKAVNADEHAVRPWLMLGDIALEQKRFTDANAYFTQVAERDINWFSEAVPSLEKIAE 262 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 ++ LE +E S + + + ++ G QA + ++ P Sbjct: 263 ETDDWDSFQ-----KNLEAHWQECATSYLAMVDVLMKRGETAQAAEYLLEQLRKRPTMRG 317 Query: 361 F-LLL 364 F L+ Sbjct: 318 FKTLM 322 >gi|325109373|ref|YP_004270441.1| SEC-C motif domain protein [Planctomyces brasiliensis DSM 5305] gi|324969641|gb|ADY60419.1| SEC-C motif domain protein [Planctomyces brasiliensis DSM 5305] Length = 715 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 3/93 (3%) Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEIN 321 A L + R A ILE++ +P + E+ L + Sbjct: 29 MKALQLHEAGQSRAALKILERLHTQDPARSWVATSLAGVQLFLEDPAAARDALKPLLAES 88 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + V+ + AL++ + A + A Sbjct: 89 PDHPLGRVLDATAALDLNGFEGARSVIHRAFTK 121 >gi|209544340|ref|YP_002276569.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209532017|gb|ACI51954.1| sulfotransferase [Gluconacetobacter diazotrophicus PAl 5] Length = 648 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 59/195 (30%), Gaps = 19/195 (9%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 +AR+ + Q+ + LL A + ++ A L L L Sbjct: 26 AIARQCEHILDQE--PDHPGASCLLGTIHAR-QGKFESAIPLLRRALARMPANAEGYNVL 82 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT------FLNQK 214 G A +A+ I PD + V + + AI L+ + Sbjct: 83 GMALRDAGQAEDAIACFRRAVAIRPDHQGARTNLGNALVAGGDRAGAIAQFRALLTLDTQ 142 Query: 215 KKNAKEWNRNRA--------ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 ++ A ++ + +L + + A++ A S + + A + Sbjct: 143 LAAIADYRTALAADPADVETLIRLGAALRTIGRCEEAAAHFQAASSH--APDRVAARLHR 200 Query: 267 AKSLISQNKKRKAEV 281 A +L + A Sbjct: 201 AGALAELGRIDDAMA 215 >gi|171057655|ref|YP_001790004.1| tetratricopeptide repeat-containing protein [Leptothrix cholodnii SP-6] gi|170775100|gb|ACB33239.1| conserved hypothetical protein [Leptothrix cholodnii SP-6] Length = 384 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 103/309 (33%), Gaps = 25/309 (8%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 +Y A + +L R+ A ++L + + G + A+ A KAL+ + A Sbjct: 85 GEYERAVRVHQHLLARADLPTSERDRAQHALAQDYLKAGLFDRAEA-AYKALEGTAFATD 143 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A++ + A++W AI + A + + A LE GD A+ Sbjct: 144 ARLALLTLHESARDWKSAIEVARGLEATAAGSFAQRIAHYWCELCLEADAAGDGAAADAA 203 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--N 306 ++ ++ S I + + L + +A + + V+P ++ + + Sbjct: 204 LTKAREVAPQSARPLILSGQRLARAGRHTEALGLWTALSTVHP-----EAFSVIAGDYAA 258 Query: 307 TVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL- 364 + +RA L + + + +A D A + ML + + + L Sbjct: 259 SAQVCQRADEALVRLKALHLAAPSADLLLAALSLESDAAARRRMLVQHLKENQSLSAALK 318 Query: 365 -----AQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYFE 419 A + + + AL + + G+ + + P + Sbjct: 319 LLQDPAAAPDDDGGESLAMQQAVGKALRPLRRYH-CAACGFEAQNYFWQCPGCHGWDTY- 376 Query: 420 WKIPTKSPE 428 P + E Sbjct: 377 ---PPRRLE 382 >gi|30584945|gb|AAP36740.1| Homo sapiens interferon-induced protein with tetratricopeptide repeats 1 [synthetic construct] gi|60653723|gb|AAX29555.1| interferon-induced protein with tetratricopeptide repeats 1 [synthetic construct] Length = 479 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262 + + A+ ++ + KG + ++ +++ +A Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAE 280 + A+ I RKAE Sbjct: 343 HLDLARMYIEAGNHRKAE 360 >gi|332708799|ref|ZP_08428770.1| serine/threonine protein kinase [Lyngbya majuscula 3L] gi|332352341|gb|EGJ31910.1| serine/threonine protein kinase [Lyngbya majuscula 3L] Length = 606 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 6/134 (4%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA-TREFAVYSLYFESC 165 + H N Q +++ A + + P T + + + Sbjct: 477 ACNDALHFKPNYPEAVWSLGQAFDQQQRSVEALRLYNQALTLKPDLTEAWLSQGITLQKL 536 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G A KA+ + + + + +++AIT LN+ + E N Sbjct: 537 --GRSVEAITALEKAIALQRNLAEAWMTKGEAQMTLGRFNQAITSLNKALQ--IEPNHRN 592 Query: 226 AILLIARSLENADK 239 A+ L ++ + + Sbjct: 593 ALKLRQQARKKLQR 606 >gi|259415019|ref|ZP_05738941.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] gi|259348929|gb|EEW60683.1| tetratricopeptide TPR_2 repeat protein [Silicibacter sp. TrichCH4B] Length = 572 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 79/268 (29%), Gaps = 39/268 (14%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY-ATKALD 182 LL+ + + + A E+ + + + + FA Y +GD A+ A Sbjct: 132 LLDAWAYMGKGAVSQALEQFDTVAEQDGLKFFATYHKALALASVGDYEGAEELFAANEGQ 191 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFL---------------NQKKKNAKEWN----- 222 + + A VQ +A+ L K + Sbjct: 192 LGRSSRRAAIARVQVLSQLGRTEQALEVLVDSFGEGFDPALTDLADKLAMGETVGFTITP 251 Query: 223 -----RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + ++L D + Y A + KL + A + +A L + Sbjct: 252 TPRDGMAEVFFSLGQALSGEAASDYVLMY--ARMAAKLSPAHVDAVLLSAGLLDQMGRY- 308 Query: 278 KAEVILEKIWKVNP--HPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + +K P HP+ + S N + +L + V + Sbjct: 309 ---ELSIATYKQVPRDHPDFHAAELGRAEALRRSANPQAAAEVLEQLARDFPQHVAVYID 365 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + + + A A++++P + Sbjct: 366 LGDLLRQQENYSDAAKAYSRALELSPEE 393 >gi|303286241|ref|XP_003062410.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455927|gb|EEH53229.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1570 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 32/266 (12%), Positives = 73/266 (27%), Gaps = 44/266 (16%) Query: 127 VQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + L + A L P R ++ G+ +A +A++ Sbjct: 936 ARFELLQGDAERARGLYRAALLHAEGRPRARAESLRKWAVMEFGAGERVNAAGLFERAMN 995 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + + + + A+E + + + Sbjct: 996 V------------------------LEEAERAARVAEEGEEDSGAEEEREASSLSSSSSS 1031 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 +DA E I+A++ + S R A+ ++ W T Sbjct: 1032 SGVKYDASE-----PGGIIAALDDPGATESSASLRAAQAVVLHAWSQ----------TKA 1076 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIF 361 S + E + + + ++++ G + +A + LA P I Sbjct: 1077 RSGEALEARALLSDAEAKDPSNPRVIHALAQLDEAAGDVLRARERYELAAANFPGDAHIA 1136 Query: 362 LLLAQIEQANSHNTDKILYWTQSALH 387 L A++E+ + +A Sbjct: 1137 LSRARLERVAFGDVAAARDIFSAAAE 1162 >gi|194383714|dbj|BAG59215.1| unnamed protein product [Homo sapiens] Length = 366 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C + A ++ Sbjct: 51 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 106 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 107 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 166 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R N+ + + D ++KL D I A + A+ + + +A EK+ Sbjct: 167 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 226 Query: 287 WKVN 290 ++ Sbjct: 227 YQTE 230 >gi|119629445|gb|EAX09040.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_a [Homo sapiens] Length = 760 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 479 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 534 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 535 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 587 >gi|115927386|ref|XP_783739.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115965250|ref|XP_001182952.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1350 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIAR 232 + + +P+ ++ + + N R L I Sbjct: 355 EEEVKANPNNYDAWFDYLRLMETDGDIETVRDLYERAIANIPPAQEKRLWRRYMYLWINY 414 Query: 233 SL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 + E + DM + L L + A+ + Q + +KA ++ Sbjct: 415 ATYEELEVRDMEKTREVYKACLDLIPHKKFTFAKMWVLMAQFEVRQKELQKARRVMGTAI 474 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ Y + E ++ + E N + + + +++ +G ID++ Sbjct: 475 GKCPKDKLFKSYIEMELQLREFDRCRV-LYEKFLEFNPANCTTWMKYAELETILGDIDRS 533 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 534 RAVYELAI 541 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIAR 232 + + +P+ ++ + + N R L I Sbjct: 995 EEEVKANPNNYDAWFDYLRLMETDGDIETVRDLYERAIANIPPAQEKRLWRRYMYLWINY 1054 Query: 233 SL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 + E + DM + L L + A+ + Q + +KA ++ Sbjct: 1055 ATYEELEVRDMEKTREVYKACLDLIPHKKFTFAKMWVLMAQFEVRQKELQKARRVMGTAI 1114 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ Y + E ++ + E N + + + +++ +G ID++ Sbjct: 1115 GKCPKDKLFKSYIEMELQLREFDRCRV-LYEKFLEFNPANCTTWMKYAELETILGDIDRS 1173 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 1174 RAVYELAI 1181 >gi|118766330|ref|NP_116202.2| transmembrane and TPR repeat-containing protein 4 isoform 1 [Homo sapiens] gi|55859640|emb|CAI11007.1| transmembrane and tetratricopeptide repeat containing 4 [Homo sapiens] Length = 760 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 479 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 534 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 535 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 587 >gi|116534937|ref|NP_001539.3| interferon-induced protein with tetratricopeptide repeats 1 isoform 2 [Homo sapiens] gi|116242522|sp|P09914|IFIT1_HUMAN RecName: Full=Interferon-induced protein with tetratricopeptide repeats 1; Short=IFIT-1; AltName: Full=Interferon-induced 56 kDa protein; Short=IFI-56K gi|13937956|gb|AAH07091.1| Interferon-induced protein with tetratricopeptide repeats 1 [Homo sapiens] gi|30582173|gb|AAP35313.1| interferon-induced protein with tetratricopeptide repeats 1 [Homo sapiens] gi|55957848|emb|CAI12379.1| interferon-induced protein with tetratricopeptide repeats 1 [Homo sapiens] gi|61361742|gb|AAX42096.1| interferon-induced protein with tetratricopeptide repeats 1 [synthetic construct] gi|61361748|gb|AAX42097.1| interferon-induced protein with tetratricopeptide repeats 1 [synthetic construct] gi|119570521|gb|EAW50136.1| interferon-induced protein with tetratricopeptide repeats 1, isoform CRA_a [Homo sapiens] gi|123993717|gb|ABM84460.1| interferon-induced protein with tetratricopeptide repeats 1 [synthetic construct] gi|123994159|gb|ABM84681.1| interferon-induced protein with tetratricopeptide repeats 1 [synthetic construct] gi|189069497|dbj|BAG37163.1| unnamed protein product [Homo sapiens] gi|261861590|dbj|BAI47317.1| interferon-induced protein with tetratricopeptide repeats 1 [synthetic construct] Length = 478 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 223 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 282 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262 + + A+ ++ + KG + ++ +++ +A Sbjct: 283 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 342 Query: 263 SICAAKSLISQNKKRKAE 280 + A+ I RKAE Sbjct: 343 HLDLARMYIEAGNHRKAE 360 >gi|262304951|gb|ACY45068.1| acetylglucosaminyl-transferase [Ammothea hilgendorfi] Length = 288 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 49/160 (30%), Gaps = 6/160 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + H + L L I + A + + L++ A +L Sbjct: 39 AEDCYGTALGLCPSHADSLNNL--ANIKREQGLTEEATKLYQKALEVFPEFAAAHSNLAS 96 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + G LN A + +A+ I P + ++ A+ + + + Sbjct: 97 VLQQQGKLNDALMHYKEAIRIQPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF- 155 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A + + D G++ + +LKL A Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIQSYKTALKLKPEFPDA 192 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+++ P+ P + A + A L + Sbjct: 10 RRAIELQPNFPDAYCNLANALKEKGLVQDAEDCYGTALGLCP----SHADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + ++L++ A A L Q K A + ++ ++ P A+ Sbjct: 66 EQGLTEEATKLYQKALEVFPEFAAAHSNLASVLQQQGKLNDALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ G L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYKTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 >gi|261419131|ref|YP_003252813.1| AIG2 family protein [Geobacillus sp. Y412MC61] gi|319765948|ref|YP_004131449.1| AIG2 family protein [Geobacillus sp. Y412MC52] gi|261375588|gb|ACX78331.1| AIG2 family protein [Geobacillus sp. Y412MC61] gi|317110814|gb|ADU93306.1| AIG2 family protein [Geobacillus sp. Y412MC52] Length = 371 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 39/133 (29%), Gaps = 23/133 (17%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + A E + +L+ Y R + A++ +AL P Sbjct: 39 RFAQLEPENTKLKIWFAQLLRD--------YG-RDIKLRKENYRKARKLFEQALRFDPGD 89 Query: 188 P-----WVTEAVVQQYVLAKEWSRAIT----FLNQKKKNAKEWNRNRAILLIARSLENAD 238 P W + W AI L K+ + ++ RA+ A + Sbjct: 90 PVCRYHWGHLELYD-----GRWKEAIRQFQIVLQSTSKHLEPYHYIRALCSSAIAYNQLG 144 Query: 239 KGDMIASYHDAIE 251 + + D +E Sbjct: 145 DPETELAILDQLE 157 >gi|167619111|ref|ZP_02387742.1| TPR domain protein [Burkholderia thailandensis Bt4] gi|257138346|ref|ZP_05586608.1| TPR domain-containing protein [Burkholderia thailandensis E264] Length = 614 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRALALAPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G A +AL++ P + + AI Sbjct: 143 LGNALNALGRHGDALAAFRRALELRPGHAGAHNNLGMALAALGDTEEAIAHFRAALAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + +L L +A A +L + + R A Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAQALSAFESALALQPRFPLALFGLANALAALGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L + L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 312 Score = 38.0 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R G L+ A+ AL +P A + + E Sbjct: 11 AHRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 66 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A L + G + + +L L +A + +Q + A Sbjct: 67 NDAALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 126 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++ + P H + N L L R E+ + + + Sbjct: 127 QRALALAPGDASIHNNLGNALNALGRHG--DALAAFRRALELRPGHAGAHNNLGMALAAL 184 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G ++A A A+ PR Sbjct: 185 GDTEEAIAHFRAALAAEPR 203 >gi|147678918|ref|YP_001213133.1| hypothetical protein PTH_2583 [Pelotomaculum thermopropionicum SI] gi|146275015|dbj|BAF60764.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 806 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 34/134 (25%), Gaps = 18/134 (13%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL-DISPDAPW 189 + A + E +P RI +A K L +++P Sbjct: 675 MVSGNREAAKQYFEKAAAVPG--------------RIEAKMAALNDTEKKLWNVAPLMEP 720 Query: 190 VTEAVVQQYVLA---KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + W+ A L K + + + +L +G + Sbjct: 721 TPAVKLNVGASQYLLGRWAEADAGLQAALSGEKTDEKTKGEAFLWLALLRDKQGRPQEAQ 780 Query: 247 HDAIESLKLCDNSI 260 ++ KL Sbjct: 781 EYLAQAQKLAPELA 794 >gi|254255306|ref|ZP_04948622.1| hypothetical protein BDAG_04641 [Burkholderia dolosa AUO158] gi|124901043|gb|EAY71793.1| hypothetical protein BDAG_04641 [Burkholderia dolosa AUO158] Length = 607 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 36/134 (26%), Gaps = 6/134 (4%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L ++ R A A ++P P + Y+ A L Sbjct: 143 GLAQQAARRHAQ--ALDAYRHAASMNPRLPMLRNNWGAAYLELGRHDEARQLLEATLAED 200 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A + G + A + L N + A + L + Sbjct: 201 PD----HAFAWTNLASVLLKTGKIDDGLVAAERACALAPNYVTALQTYSYVLREHRQFDA 256 Query: 279 AEVILEKIWKVNPH 292 A + ++ + PH Sbjct: 257 ALEVAQRALGIEPH 270 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 14/143 (9%) Query: 87 ALYTGL---MSIAAHN-------IPLARKMHSYVSQQH--TFHNEYLVYLLE--VQIALA 132 A+ TGL + A N AR+ + N L L L Sbjct: 123 AIATGLCRHFAADAGNWFRLGLAQQAARRHAQALDAYRHAASMNPRLPMLRNNWGAAYLE 182 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 +++ A + LE L FA +L + G ++ A +A ++P+ + Sbjct: 183 LGRHDEARQLLEATLAEDPDHAFAWTNLASVLLKTGKIDDGLVAAERACALAPNYVTALQ 242 Query: 193 AVVQQYVLAKEWSRAITFLNQKK 215 +++ A+ + Sbjct: 243 TYSYVLREHRQFDAALEVAQRAL 265 >gi|298243809|ref|ZP_06967616.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297556863|gb|EFH90727.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 1332 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 85/272 (31%), Gaps = 33/272 (12%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 QI ++ A + + + A A R G +A + +AL Sbjct: 981 GQIYQQCGNFDQALDSYALASRDSAVEVLARVGSAHCYLRQGKPEAAIQQFEQALQAVRR 1040 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 AP A++ W+ + ++ +E + + + G + Sbjct: 1041 AP----ALLDPTT----WAA------RPREEGEEHKAPEVEISLLLAQAYRRSGRQDQAE 1086 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 + + ++ + + A+ + A E + ++ Y + Sbjct: 1087 NIMRQVKQVRAGNDEVASTLAEISARRPDPSTAVR--EYM-------DLVRHYRQSRQID 1137 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA----MKIAPRKEIFL 362 LK L + + ++ ++ I + G +D+ A+ L ++ E Sbjct: 1138 NA--LKVLNELVHLAPQEPQAHEELADIYINRGLLDEGIAELRLLVDANLRRNNTAEAAA 1195 Query: 363 LLAQIEQ--ANSHNTDKILYWTQSALHAMPDP 392 L +I + ++++ L A A DP Sbjct: 1196 TLQRIGNIFDETGDSEEALAAFCRA--AELDP 1225 Score = 37.2 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 80/269 (29%), Gaps = 38/269 (14%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQ--------------------IPATREFAVYSLY 161 + LL Q + + A + + Q P+T L Sbjct: 1068 ISLLLAQAYRRSGRQDQAENIMRQVKQVRAGNDEVASTLAEISARRPDPSTAVREYMDLV 1127 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + +++A + + + ++P P E + Y+ I L Sbjct: 1128 RHYRQSRQIDNALKVLNELVHLAPQEPQAHEELADIYINRGLLDEGIAELRLLVDANLRR 1187 Query: 222 NRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N + + N + GD + + +L NS+ ++A Sbjct: 1188 NNTAEAAATLQRIGNIFDETGDSEEALAAFCRAAELDPNSMDLLREVVGFCFRVGHPQEA 1247 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 ++ IA Y ++ + +L I++ + ++ ++ + +G Sbjct: 1248 AR-----YQAV----IARHYFE--TQQVKEAVAALQQLITIDRNNFDAYDMLGQTYQAVG 1296 Query: 340 SIDQAHAKAMLAMKIAP-----RKEIFLL 363 +QA KI P R+ + L Sbjct: 1297 EYEQASRVYRNLAKINPGSSIARERLATL 1325 >gi|283852957|ref|ZP_06370216.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] gi|283571647|gb|EFC19648.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] Length = 567 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 21/236 (8%) Query: 133 ERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A + LE + P R+ Y L + A + + L+ +P Sbjct: 97 QNDREAATQTLEKGLAAFPGARQLTFY-LANAYQMRRMEDMAVKTLERFLEKNPADAPAL 155 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + + + +A+ L + A +L R+ A G A+ Sbjct: 156 QELASLLEDSGKHEQALAVLGR-----IPEKDRDATVLYLRAKAEAGHGRKDAAMGTLRA 210 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 ++ + A A L + AE + L E+ + Sbjct: 211 AVAKDPALMPAWADLAGLLEQAGDLKGAE-------------DCYRKMLSLGEESPEVRA 257 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 + A L + K +++ ++++ A + A + + A K++ LL + Sbjct: 258 RLARILIK-QKNPAQAVSLLAEGAPDKSRFLDAMSALVEAGYPRQAKQVLGLLTAL 312 Score = 37.6 bits (86), Expect = 5.3, Method: Composition-based stats. Identities = 44/341 (12%), Positives = 95/341 (27%), Gaps = 64/341 (18%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIP 150 A + L + A + ML + P Sbjct: 196 AGHGRKDAAMGTLRAAVAKDPALMPAWADL--AGLLEQAGDLKGAEDCYRKMLSLGEESP 253 Query: 151 ATREFAVYSLYFES--------CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-- 200 R L + G + ++ + + P + V+ Sbjct: 254 EVRARLARILIKQKNPAQAVSLLAEGAPDKSRFLDAMSALVEAGYPRQAKQVLGLLTALD 313 Query: 201 ---------------AKEWS--RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + + A+ L + ++++ L R ++ GD Sbjct: 314 PDSPDLPFYKAVLAYEGDKNPREALAILGRVPPENPNYDKS----LAFRIQIASEIGDFG 369 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + E+ + + A L + A +LE +P ++ +Y + + Sbjct: 370 KAAGLVREARQRYPDRKEFISVEAALLDKRGDTAAAAKVLENALAASPD-DVDLLYRYGV 428 Query: 304 SENTVGKLKRA-------LRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIA 355 + KLKR ++ + ++L + +A E +++A + A++ Sbjct: 429 ---ALEKLKRRDEAKAVMEKIVAKEPTNPDALNYLGYSLAEEGRDLEKALSMVKTALEKE 485 Query: 356 PRKEIFL---------------LLAQIEQANSHNTDKILYW 381 P FL LA IE+A +H + W Sbjct: 486 PDNPFFLDSLAWTLHKLGRANEALAAIERAIAHKVKDAIIW 526 >gi|264676953|ref|YP_003276859.1| hypothetical protein CtCNB1_0817 [Comamonas testosteroni CNB-2] gi|299531516|ref|ZP_07044922.1| TPR repeat protein [Comamonas testosteroni S44] gi|262207465|gb|ACY31563.1| TPR repeat protein [Comamonas testosteroni CNB-2] gi|298720479|gb|EFI61430.1| TPR repeat protein [Comamonas testosteroni S44] Length = 595 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 20/279 (7%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI--AHEKLEMMLQ 148 G M + A P A + ++ E L L + ++ Sbjct: 208 GHMRLIAGQKPAALQALQNGAK---LGPESGAVALLAMELLESGSAEVEPLVKRYLEKNH 264 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 P R L + Q +A P+ P + + E A Sbjct: 265 SPQLRLTYARVLLGQKRNADAKTQLQLITREA----PEFPEAWVMLANLQLQDGELDAAD 320 Query: 209 TFLNQ------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 L Q K + L + R+ + A+K ++ + N + Sbjct: 321 VSLTQFSALLPKLPEGVGRAAGESQLYLLRA-DLAEKRQRYDEADIYLQRIPDAANLLSV 379 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGKLKRALRLE 318 A L Q K ++A +++ I P+ +IA + + +L Sbjct: 380 QARRADLLARQGKVKEARALIQAIPANGPNQKRLKQIAEVQLLRDAGLNKEAYALQAQLL 439 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + VE + +A G+ + +K P Sbjct: 440 SQAPDDVELAYDTALLAERAGNFSEMERLLRDIIKRKPD 478 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 55/205 (26%), Gaps = 10/205 (4%) Query: 100 IPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALA-----ERQYNIAHEKLEMMLQI-PAT 152 LA K Y LL VQ A + + A ++ + P Sbjct: 351 ADLAEKRQRYDEADIYLQRIPDAANLLSVQARRADLLARQGKVKEARALIQAIPANGPNQ 410 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + + G A + L +PD + A +S L Sbjct: 411 KRLKQIAEVQLLRDAGLNKEAYALQAQLLSQAPDDVELAYDTALLAERAGNFSEMERLLR 470 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K ++ L + + + + +L + + A Sbjct: 471 DIIKRKPDFKHAYNALGYSYA---DRGIKLEEAQTLIQTALDMQPGDPFITDSLAWVHFR 527 Query: 273 QNKKRKAEVILEKIWKVNPHPEIAN 297 + +AE +LE+ + EIA Sbjct: 528 RGNLDEAEKLLEQAYATRQDAEIAA 552 >gi|255065140|ref|ZP_05316995.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256] gi|255050561|gb|EET46025.1| tetratricopeptide repeat protein [Neisseria sicca ATCC 29256] Length = 627 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 22/183 (12%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 AR+++ F LL +I L + A MML + E A +L Sbjct: 60 ARRVNIQNRANQIF------TLLSGEILLQKGDAGTALATYMMMLNNTKSPEVAERAL-E 112 Query: 163 ESCRIGDLNSAQRYATKALDISP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + + A+ K +I P W+ ++ + + + L+ Sbjct: 113 MAVSLNAFQQAEMIYQKWREIEPVPGNAQKRMTWLRNILL------GQGDKTLNGLDDIL 166 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 NA E R LL+A++ AS E+LK D + + A +Q Sbjct: 167 ANASEEQNQRIFLLLAQAAIQQPGLAEKASSQVHKEALKYKD--LPEAAIADVIFSAQGG 224 Query: 276 KRK 278 K+K Sbjct: 225 KKK 227 Score = 37.2 bits (85), Expect = 5.9, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 88/256 (34%), Gaps = 22/256 (8%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L+ + Y A + L ++ + AV+ E+ + G+ +A A +A + Sbjct: 350 LIGAMAYADVKDYPKAKQWLAKVVSPSYVFDKAVFGASLEAEQ-GNGKAALAEARRAQSL 408 Query: 184 SPDAP-------WVTEAVVQQYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARS 233 P+ + + A++ LN+ K + +L R+ Sbjct: 409 -PEQEGRYFGSKELQRVTLFALSKHDNLQEALSELNKMLPKISRQPDAMEQLPDVLYQRA 467 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKV 289 + GD + D ++L ++ A+ A I + +K A +++ +++ Sbjct: 468 MIYDRMGDQGKAIADLRRVVELAPDN--ANGLNALGYILLSPTKKNLDEAFKLIQAAYQI 525 Query: 290 NP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P +P I + + + L ++ L E + E + + G ++A Sbjct: 526 EPENPAINDSLGWAYFLKDDVQTALPYLQYAFEKYPD-AEVAAHLGEALWASGEQEKAKK 584 Query: 347 KAMLAMKIAPRKEIFL 362 +K +I Sbjct: 585 IWTDGLKGEGDMKILR 600 >gi|222149840|ref|YP_002550797.1| TPR repeat protein [Agrobacterium vitis S4] gi|221736822|gb|ACM37785.1| TPR repeat protein [Agrobacterium vitis S4] Length = 1677 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 4/132 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E LQ+ + + ++ +GD A +A+ + Sbjct: 43 ALALHLSGRSREAIPAFEHALQLAPDQSGLLQNMVLPLIAVGDHQRAIDIGARAVTLDGK 102 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 A +V AK W A+ + + N LL + + GD + Sbjct: 103 AVGAWSNLVLALTSAKRWDEAL----NAARQGLALDNNEPSLLAQMGVILLELGDSAGAE 158 Query: 247 HDAIESLKLCDN 258 +L+L + Sbjct: 159 THLRRALELKPD 170 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 88/295 (29%), Gaps = 56/295 (18%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 +E L E R Y A + +L RE + L G Sbjct: 567 AGRATDDAPDEAADGLNEAIKRHQGRDYGRAVQLYRHVLTQDFQRERVLNLLGMACLEAG 626 Query: 169 DLNS-----AQRYATKALDISPDAP--WVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKE 220 + +S A + +A+ I P W A+ + L + RA+ ++ Sbjct: 627 ERSSVAGRQAIPFCARAVAIRPSLGDHWSNFAIALDAAGLVTDGMRAL-------RHGLL 679 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 ++ A L+A + GD ++ A E LK S A A + ++ + AE Sbjct: 680 YDTGHAACLLALARRETSVGDAETAFRRAGEVLKAQPRSGHALSVYAAAALALGRFNVAE 739 Query: 281 VILEKIWKVNP-----HPEIANIYTHLLSENTVGK------------------------- 310 L + ++ P H ++ + + Sbjct: 740 EALRRACRIEPELASHHVQLGAVLLKAKQPQAAARAWEKALTLDPGNADAWSNLGVAERN 799 Query: 311 ---------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++R L + ES + ++ G D+A A++ P Sbjct: 800 HGYADLACWIQRQGALAK--PGHAESWSNLGISLMDTGREDEAILAFGKAIEARP 852 >gi|194222021|ref|XP_001494093.2| PREDICTED: similar to transmembrane and tetratricopeptide repeat containing 4 [Equus caballus] Length = 1073 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 8/123 (6%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 ++ + + +W A + ADKG+ A+ E++ Sbjct: 786 TLRCMIRSGDWRSEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAVRYYREAV 841 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 842 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 897 Query: 314 ALR 316 Sbjct: 898 FEA 900 >gi|256074639|ref|XP_002573631.1| cell division cycle [Schistosoma mansoni] gi|238658815|emb|CAZ29863.1| cell division cycle, putative [Schistosoma mansoni] Length = 787 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 72/250 (28%), Gaps = 19/250 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + Y AH+ +I + + ++ + A L + Sbjct: 384 AARAHMDNSDYQTAHKLFNEARRIEPWQLSGMDFYSTVLWQVQADQELSQLAHDLLQLDR 443 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 +AP L E AI F + + + A L+ ++ D + Sbjct: 444 NAPEPWCVAGNCLSLQGEHEAAIKFFRRALQVSPT--SAYAWTLLGHEQSTLEEFD--RA 499 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 +L++ A + Q K AE L + + P + Sbjct: 500 LAAFQFALRIDPRHYNALFGISNVYYKQEKFDLAENYLVRAVALFPQ----SHLLLTHLA 555 Query: 306 NTVGKLKRA-----------LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +L R R +I + + + I +G + ++ + + Sbjct: 556 ALRSRLGRLDDGYGSAMDLISRACKIQPNNPLARYHKASILYHLGRYSEVLSELQKLLVL 615 Query: 355 APRKEIFLLL 364 PR+ + L+ Sbjct: 616 TPREAMVYLM 625 >gi|170079336|ref|YP_001735974.1| receptor ligand binding family protein [Synechococcus sp. PCC 7002] gi|169887005|gb|ACB00719.1| receptor ligand binding family protein [Synechococcus sp. PCC 7002] Length = 466 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 47/175 (26%), Gaps = 39/175 (22%) Query: 45 LSILYFFLFAWILL----FAVSRF--FLSCPAM----LFHMLHKRNYDKGYKAL------ 88 ++L + LL + + L P + +G + L Sbjct: 8 AALLGALVITLGLLGAGGWWFLQQNQSLQLPTSLGDVIGQGETANRLSRGERLLLQGDRQ 67 Query: 89 ---YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV----QIAL---------- 131 G+ + + P A ++ Q E L+YL Q A Sbjct: 68 PDKEQGIAAYGTGDFPEAIRLFQASLQASPNDPETLIYLNNAKIRQQTANPQAIAVVVSL 127 Query: 132 -AERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDL----NSAQRYATKA 180 + + A E L + Q L + GD AQ A +A Sbjct: 128 PVDTDTSGAKEILRGVAQAQKEALDGGRGFLVVLADDDGDPAIAAEVAQALADQA 182 >gi|156740399|ref|YP_001430528.1| TPR repeat-containing serine/threonine protein kinase [Roseiflexus castenholzii DSM 13941] gi|156231727|gb|ABU56510.1| serine/threonine protein kinase with TPR repeats [Roseiflexus castenholzii DSM 13941] Length = 545 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 25/238 (10%) Query: 64 FFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVY 123 + P R+ + +K GL + A + + Sbjct: 309 ALVGSPFPRESAFDDRDEAEHWK--ERGLAHMNMGEYKEAIRCFKRTV-ELDQDQPDGWN 365 Query: 124 LLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGD-------LNSAQR 175 L+ + E + + + T +Y GD A Sbjct: 366 LIARCSLQLWLYHEALQAVDEGLRRAVSRTEFAHLYG------ARGDIFATMQKPVDALA 419 Query: 176 YATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 KAL +P AP W ++ V+ Q + E ++A +L + + + + A+ Sbjct: 420 AFDKALSYTPTAPALWRSKGVLLQRL--GEMAQAQEYLEKAIQ----LDPSDAVARRLLG 473 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 G ++ + E+LKL S+ + L+ + +A+ EK +++P Sbjct: 474 DVLCASGRHKSAANSYAEALKLDPRSVDGWVRYGNCLLHLARLEEAKHAFEKALQIDP 531 >gi|108757730|ref|YP_632805.1| TPR domain-containing protein [Myxococcus xanthus DK 1622] gi|108461610|gb|ABF86795.1| TPR domain protein [Myxococcus xanthus DK 1622] Length = 624 Score = 41.8 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 7/234 (2%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L+ ++ + A + L + L + L E R+GDL A+R +A+ Sbjct: 57 TNYLQSRLKHHAGDHRGAVDALRLALATDDGNPLLLTRLGEEYARLGDLTRAERELRRAV 116 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +P + + +K ++RA L + +L + + G Sbjct: 117 LRAPAYYPAHVLLGRVLTESKRFARARLHLRRAVTLKPREPEAYLVLTQL----HLEMGA 172 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + +L + +AE +L + P Sbjct: 173 PDEAVKVVDALALALPGEASGYQRLGLALAERGDTARAERLLVEAATRAPGDVDVLTALA 232 Query: 302 LLSENTVGKLKRALRLEEI---NKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L E+T ++ L + +S E L+ + AL+ GS +A A + Sbjct: 233 QLYEDTGRPVQAEESLARALERDPDSREVLLGAGRAALKAGSAVRARAYFDRLL 286 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 98/324 (30%), Gaps = 40/324 (12%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY-- 161 + S + V L + AL A + +L + + E V + Sbjct: 243 QAEESLARALERDPDSREVLLGAGRAALKAGSAVRARAYFDRLLSLSSEPEMPVRVAFSY 302 Query: 162 ------------FESCRIGDLNSAQ--RYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 E+ R GD + YA + EA A ++ A Sbjct: 303 LAAREPRAAAEVLEAARRGDHADPRLAYYAGLVHERMRRFADAAEAFAGVPAEADVYADA 362 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLE---------------NADKGDMIASYHDAIES 252 L + + + +RA+ L +++ G + E Sbjct: 363 R--LRRARSLSLLGEHSRALTLFRAAMQESPADVEVRMQFARALERGGTPNRAELLLREG 420 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTV 308 L ++ + AA Q + R+A +L P + +Y H + Sbjct: 421 LSAGPSAALYDALAATLH-RQGRGREALTLLRGAVARFP-RDEDLLYVLGAAHERQGDVT 478 Query: 309 GKLKRALRLEEINKESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 G L R + ++ + +L + +A ++D+A + A+++ P +L Sbjct: 479 GALARMRAVLAVSPDHAAALNFLGYLLAQAGQNLDEAERRVRRALELRPDTGAYLDSLGW 538 Query: 368 EQANSHNTDKILYWTQSALHAMPD 391 + + + + A PD Sbjct: 539 VYFRRGDYARAVDALERASTLAPD 562 Score = 38.4 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 48/326 (14%), Positives = 93/326 (28%), Gaps = 42/326 (12%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 AR E YL+ Q+ L + A + ++ + L Sbjct: 140 ARARLHLRRAVTLKPREPEAYLVLTQLHLEMGAPDEAVKVVDALALALPGEASGYQRLGL 199 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 GD A+R +A +P V A+ Q Y +A L + + + Sbjct: 200 ALAERGDTARAERLLVEAATRAPGDVDVLTALAQLYEDTGRPVQAEESLARALERDPD-- 257 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +L R+ A +Y D + SL + A S ++ + R A + Sbjct: 258 SREVLLGAGRAALKAGSAVRARAYFDRLLSLSSEPEMP---VRVAFSYLAAREPRAAAEV 314 Query: 283 LEKIWKVNPH------------------PEIANIYTHLLSEN---TVGKLKRALRLEEIN 321 LE + + + A + + +E +L+RA L + Sbjct: 315 LEAARRGDHADPRLAYYAGLVHERMRRFADAAEAFAGVPAEADVYADARLRRARSLSLLG 374 Query: 322 ----------------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 VE + ++ G+ ++A + P ++ LA Sbjct: 375 EHSRALTLFRAAMQESPADVEVRMQFARALERGGTPNRAELLLREGLSAGPSAALYDALA 434 Query: 366 QIEQANSHNTDKILYWTQSALHAMPD 391 + + + D Sbjct: 435 ATLHRQGRGREALTLLRGAVARFPRD 460 >gi|288963193|ref|YP_003453472.1| TPR repeat-containing protein [Azospirillum sp. B510] gi|288915445|dbj|BAI76928.1| TPR repeat-containing protein [Azospirillum sp. B510] Length = 866 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 7/226 (3%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Q A + L + A+ L + +G A +A +A+ + PD Sbjct: 17 SGQAAEAERQYRGFLSRGSFSTDAMVPLAELARCLGLTAEALAWAGRAVRLRPDQADAWT 76 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + A A L A ++ + + E+ Sbjct: 77 LYALALIAQHRVEAGTAAVGRALMIAP----RSAPALRAAAVAMLRMNRLPEAAARCGEA 132 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVG 309 L + A A +++ + +A+V+ + + P A + Sbjct: 133 LAIQPGYADALATLALIRMAEGRAEEADVLFRQATALPMAPAEAFGNHAALLARLGRDAE 192 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L+RA R + + ++ + + G D A A+ Sbjct: 193 ALERAERAVALRPRLASAHHLLGTLHRQAGRTDPASRHFKAAIAAD 238 >gi|89056160|ref|YP_511611.1| transcriptional regulatory protein-like [Jannaschia sp. CCS1] gi|88865709|gb|ABD56586.1| transcriptional regulatory protein-like protein [Jannaschia sp. CCS1] Length = 527 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 13/156 (8%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + + A A +A+D P + A + A+ ++ Sbjct: 358 LAICKLSLRRYDVALADAQRAIDADPASAMAHGCHAWVLAYAGRYRDALAAYDRAVALGG 417 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK---- 275 + R + + R GD + A E + L ++ +L S + Sbjct: 418 PSDPRRVLWMTGRETAQFGLGDYEGALDTARELIALSPDNPSGYRVKCAALASLGRLVEA 477 Query: 276 KRKAEVI--------LEKIWKVNP-HPEIANIYTHL 302 +R A + ++ P PE+A+ Y Sbjct: 478 RRAAAKLVALLPGHDVDTAIARQPFQPELASEYAAA 513 Score = 37.2 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 75/261 (28%), Gaps = 49/261 (18%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATR------EFAVYSLYFESCRIGDLNSAQRYATK 179 Q L + ++ A + P R Y + +A+ + + Sbjct: 248 TAQPELIKAEHQKAEKT------DPEARSAWQEFVLGQY--LLAAPDKPANAAARAHFER 299 Query: 180 ALDISPDAP-----------------WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 A+ + P + W A + A++ RA+T + Sbjct: 300 AMSLEPGSGRIHAGLAMTHLWDYWYDWSQNAGISLETAARDAERALTL------APDDSW 353 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + SL D + DA ++ S MA C A L + R A Sbjct: 354 AWSILAICKLSLRRYD-----VALADAQRAIDADPASAMAHGCHAWVLAYAGRYRDALAA 408 Query: 283 LEKIWK----VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++ +P + + G L A L ++ ++ + Sbjct: 409 YDRAVALGGPSDPRRVLWMTGRETAQFGLGDYEGALDTARELIALSPDNPSGYRVKCAAL 468 Query: 336 LEMGSIDQAHAKAMLAMKIAP 356 +G + +A A + + P Sbjct: 469 ASLGRLVEARRAAAKLVALLP 489 >gi|83647331|ref|YP_435766.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396] gi|83635374|gb|ABC31341.1| FOG: TPR repeat [Hahella chejuensis KCTC 2396] Length = 1131 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 82/265 (30%), Gaps = 37/265 (13%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++A + D P A++ +E + L ++ +A+L Sbjct: 237 PDAALQTLRAGADDEPSIKLARAAILLTSGQQQEAGSLLESLQNDQRLGHLALAMKAVLA 296 Query: 230 I--------------ARSLENADKGDMIASYHDAIESLKLCDNSI----------MASIC 265 A +L NAD + + A ++ +I ++ Sbjct: 297 AVNSQSQQALQLAQDAVAL-NADSPSALLALSYAWQANINLPEAIAAAERATVAAPHNVI 355 Query: 266 A----AKSLISQNKKRKAEVILEKIWKVNP-HPE--IANIYTHLLSENTVGKLKRALRLE 318 A+ ++ A+ + ++ P HP+ IA + L R Sbjct: 356 VWTRLAELQLTSGAYSNAKYAASRATEIAPTHPQAQIAEGFIALFEHKLADADAHFQRAI 415 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR---KEIFLLLAQIEQANSHNT 375 + + ++ + + L G ++ +A+ ++P +L A E+ S + Sbjct: 416 KADPGVPDAWLGLGLTKLRGGDLEAGRNNLEVAVSLSPNNAVLRSYLGRAYFEEKRSDDA 475 Query: 376 DKILYWTQSALHAMPDPLWISDDGY 400 + W + DP DG Sbjct: 476 GE--QWLLAKERDSKDPTPYFYDGV 498 >gi|28199111|ref|NP_779425.1| hypothetical protein PD1224 [Xylella fastidiosa Temecula1] gi|28057209|gb|AAO29074.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] Length = 698 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 65/214 (30%), Gaps = 20/214 (9%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA---------------LA 132 L + A A++ + QQ+ H L LA Sbjct: 28 LARAWCASAPGEAQ-AQRWLAAALQQYGEHKAALTASEAALALAPELPELHLQHGLLLLA 86 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A L ++ + + G L+ A++ + A I D P + Sbjct: 87 QHDLSGADAALSRSTRLDPNQFNTYVMQAHLAIARGALDEAEQLSRTAARIISDHPQLLA 146 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + +A+ L+Q + E +L + KG + + Sbjct: 147 VNATITLHRGQVDQALAMLSQAVELLPE----EPAVLFSLGFAYLQKGHIAFAERAFQRV 202 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++L + I A+ Q + A ILE+ Sbjct: 203 IELNPHVIPVRALIAQLAQRQGRLDDALRILEEA 236 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 101/301 (33%), Gaps = 34/301 (11%) Query: 92 LMSIAA----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L+++ A H + + + E V L + A + ++ Sbjct: 144 LLAVNATITLHRGQVDQALAMLSQAVELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVI 203 Query: 148 QIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWS 205 ++ V +L + + R G L+ A R +AL + D P + + ++A Sbjct: 204 ELNP-HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELMAGNPD 262 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 RA+ L Q E R LL A + D D + A++ K + Sbjct: 263 RALPHLRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKKRNHDL-----W 316 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KE 323 A+ ++ +A +++E+ + + E+ L ++ + Sbjct: 317 LARLSVAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQN 359 Query: 324 SVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + E+ V++ +A+E G + ++ P + L IE H + W Sbjct: 360 NPEAAETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVACLQQLIESVPEHERTILRPW 419 Query: 382 T 382 Sbjct: 420 L 420 >gi|85107807|ref|XP_962452.1| hypothetical protein NCU11379 [Neurospora crassa OR74A] gi|28924058|gb|EAA33216.1| hypothetical protein NCU11379 [Neurospora crassa OR74A] Length = 734 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 38/220 (17%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + ++ A + + + P +++ L +I D + L P Sbjct: 91 KNFDEAIKAYKFALKLEPESQQI-QRDLAVLQVQIRDYQGYVQSRFAMLKAKPHLRQNWT 149 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMIASYHD 248 A+ Y L +A L +K+ ++ + L+ ++ A++GD+ + Sbjct: 150 ALAIAYQLEGSLEQAENILTTYEKSMTNVPLKTDQEHSEALLYKNTIIAERGDIKRALEH 209 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 K C + + A+ L N+K +A W+ Sbjct: 210 LESDCKNCLDRLAVMEMRARYLGQLNRKEEAAK----AWRA------------------- 246 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 L + N E E + + ALE+ D+A KA Sbjct: 247 --------LLDRNPEHPEYYKGLIE-ALEIDEKDEAALKA 277 >gi|326915587|ref|XP_003204096.1| PREDICTED: tetratricopeptide repeat protein 13-like [Meleagris gallopavo] Length = 685 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 34/188 (18%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A + MLQ A+ + + + D+ +A + + + PD Sbjct: 73 NGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEPDH 132 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKK-----------------------------KNA 218 P V E + S A++ L + +++ Sbjct: 133 PEVFEQRAEILSPLGRISEALSDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQHS 192 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E N+N+ I ++ + L +G + + E+LK + I A ++ Sbjct: 193 LELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFDA 252 Query: 279 AEVILEKI 286 A +K Sbjct: 253 ATESFQKA 260 >gi|322787461|gb|EFZ13549.1| hypothetical protein SINV_08719 [Solenopsis invicta] Length = 847 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 27/240 (11%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ P+ Sbjct: 441 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 496 Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++Q+ A+ A L + + K+ N R + + D D ++ Sbjct: 497 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSGSAE 552 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299 ++ L ++ A A L + + +A L + V HP+ + +IY Sbjct: 553 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 610 Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ + R R+ +++ +++ L + + +E G + A A +AP + Sbjct: 611 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLERAAALAPHQ 668 >gi|156549360|ref|XP_001601753.1| PREDICTED: similar to GA17918-PA [Nasonia vitripennis] Length = 1015 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 88/240 (36%), Gaps = 27/240 (11%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ P+ Sbjct: 576 NRTKEAQEVYERALFYDSNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPEHEQ 631 Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++Q+ A+ A L + + K+ N R + + D D ++ Sbjct: 632 ALLNSAILLQELGRAELRKVARERLLKLLR--KDSNNERVHFNLG--MLAMDDHDSESAE 687 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299 ++ L ++ A A L + + +A L + V HP+ + +IY Sbjct: 688 RWFRNAVALKEDFRSALFNLALLLADEQRPLEAAPFLNQ--LVRFHPDHVKGLILLGDIY 745 Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ + R R+ +++ +++ L + + +E G + A A +AP++ Sbjct: 746 INNIKDLDAAENCYR--RILQLDPTNIQGLHNLCVVMVERGKLGLAAQCLERAAALAPQQ 803 >gi|194366102|ref|YP_002028712.1| tetratricopeptide repeat-containing protein [Stenotrophomonas maltophilia R551-3] gi|194348906|gb|ACF52029.1| Tetratricopeptide TPR_2 repeat protein [Stenotrophomonas maltophilia R551-3] Length = 306 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 5/141 (3%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + + + + LL+ Q + A + P + L + R D Sbjct: 71 RQRYGDPPALRLLQADALRETGQADAAIALYRELSSGPQAAAA-AHGLGLIAARRDDDAG 129 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 +++ +A + P + + A + +A L + + + + A L Sbjct: 130 SEQALAQATQLQPLNTSYLGDLGYARLRAGRFEQAREPLAKALELSPGNAKATANL---- 185 Query: 233 SLENADKGDMIASYHDAIESL 253 +L +GD + A ++ Sbjct: 186 ALWAVLRGDTATAERLAQQAN 206 >gi|46202374|ref|ZP_00053308.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 1207 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 14/207 (6%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R GD +A + + + P A Q LA ++ F + E +R Sbjct: 31 ARRYGDTETALSAYRRIIALDPINTEAPLAAAQTCRLAGRPRDSLLFC----LDLLEMDR 86 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + G ++ L +S+ A+ L + + AE+ L Sbjct: 87 QHMGCRLELAEALRQIGQPEEAHAIIDILLMERPDSVQVWCGLAQLLCDEGRLAGAELSL 146 Query: 284 EKIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + + HP + L + L + + V V +++ +++ Sbjct: 147 RRALGL--HPGFGPAWATLGGVLARMGESDAALDAFHAAIILEPDQVSHQVHLAEALMDL 204 Query: 339 GSIDQAHAKAMLAM---KIAPRKEIFL 362 ID+A A A+ + P + Sbjct: 205 NRIDEAAAHIGRALALDEEDPSARLAR 231 Score = 39.9 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 65/224 (29%), Gaps = 21/224 (9%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++ + A + + + E L Q + + +L++ Sbjct: 30 LARRYGDTETALSAYRRIIALDPINTEA--PLAAAQTCRLAGRPRDSLLFCLDLLEMDR- 86 Query: 153 REFAVYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 + E+ R G A L PD+ V + Q + A L Sbjct: 87 QHMGCRLELAEALRQIGQPEEAHAIIDILLMERPDSVQVWCGLAQLLCDEGRLAGAELSL 146 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + A L A G+ A+ ++ L + + + A++L+ Sbjct: 147 RRALGLHPGFGPAWATL----GGVLARMGESDAALDAFHAAIILEPDQVSHQVHLAEALM 202 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 N+ +A + + L E+ +L RA Sbjct: 203 DLNRIDEAAAHIGRA-------------LALDEEDPSARLARAR 233 >gi|326433511|gb|EGD79081.1| hypothetical protein PTSG_02049 [Salpingoeca sp. ATCC 50818] Length = 759 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 30/148 (20%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLL-------------EVQIALAERQYNIAHEKLE 144 + AR + H+ E +++L Q ++ Y A E L Sbjct: 351 GDTMRARGAQEGAIKYHSKALEIRLHVLGEDHDDTRESRRDVAQAYESKGDYTTALEHLN 410 Query: 145 MMLQIPATREFAVYSLYFESC---------RIGDLNSAQRYATKALDI--------SPDA 187 L++ +E+ Y + R + A RYA KAL++ P++ Sbjct: 411 KALEVMEGKEYGPYDTTLAAVYNQLGRVYARTKQNDEAIRYAEKALEMFEKAYGEDHPES 470 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + Q Y + +RAI +L++ Sbjct: 471 ASSINVLAQVYQNKGDTTRAIEYLHRAL 498 >gi|313899639|ref|ZP_07833145.1| tetratricopeptide repeat protein [Clostridium sp. HGF2] gi|312955560|gb|EFR37222.1| tetratricopeptide repeat protein [Clostridium sp. HGF2] Length = 504 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 33/215 (15%) Query: 154 EFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 SL N+A Y KAL D W+ + ++ ++W++ + +L Sbjct: 244 LLGDVYRSLQRIRESDEQYNTALEYFEKALQKETDIYWIYQEMIWIAHKQQDWTKKLQYL 303 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIAS-------YHDAIESLKLCDNSIMASI 264 + + K+ L+ + +D D + + E ++ D Sbjct: 304 ERASEEKKD----DLWLMFHYARCYSDLHDHVKAIAACEFCLQHGEEGREMQD------- 352 Query: 265 CAAKSLISQNKKRKAEVILEK--------IWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 A +L ++ KA +L+K W + E+ YT L E+ ++ + Sbjct: 353 LYAWNLGRSSQGEKAIAVLKKRIERFGGEAWNFS---ELGWNYTQL--EDYKEAIRCFKK 407 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 ++ ++ + ++ L + +D A + + A Sbjct: 408 AYDLEPKNPLNCSMLGWCNLRLNQLDAALSFLLEA 442 >gi|168704383|ref|ZP_02736660.1| serine/threonine-protein kinase [Gemmata obscuriglobus UQM 2246] Length = 1008 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 65/229 (28%), Gaps = 35/229 (15%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 L R+ + A + L ++ A L D A R ++L ++P P Sbjct: 787 ALLRTRELDAAVQSLRAAVECDPRSAVAHAELGRALQLKRDTTGAIRAYRESLKLNPANP 846 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A+ ++ AI + A L + GD + Sbjct: 847 GAASALGHLLWDREDLDGAIGAFRDALRYAPA----EPGLHNNLGMLLRQTGDPRGAASA 902 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 E+++L + ++ + +A + Sbjct: 903 YKEAIRLDPKHL-------RARYNLGVALRAAK------------------------DPA 931 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 G +K L ++ + ++G +D A A+ A+ I P Sbjct: 932 GAVKAYRELLALDPNHSAGHNGLGNALRDLGDLDGAIAEFRAALSINPS 980 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 2/106 (1%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G++ + A + + H L A + A + +L + Sbjct: 887 GMLLRQTGDPRGAASAYKEAIRLDPKHLRARYNL--GVALRAAKDPAGAVKAYRELLALD 944 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 L +GDL+ A AL I+P + + Sbjct: 945 PNHSAGHNGLGNALRDLGDLDGAIAEFRAALSINPSNGPAQQNLTD 990 >gi|110679389|ref|YP_682396.1| TPR domain-containing protein [Roseobacter denitrificans OCh 114] gi|109455505|gb|ABG31710.1| TPR domain protein [Roseobacter denitrificans OCh 114] Length = 285 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 53/150 (35%), Gaps = 9/150 (6%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 LE +A A +++ A E + + T A + + GD + A++ +A+ Sbjct: 145 LEAMMADANKEWRKADSFYETAIGLTTTPAGAFNNWGYSKLTRGDFSGAEKLFGQAIRQD 204 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P +V ++++ RA LL +L +GD+ Sbjct: 205 PTLFTAKNNLVLARSAQRKYT---------LPVVPMTQSERAQLLHTMALSAVRQGDIQT 255 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQN 274 S +++ A++ A ++L Sbjct: 256 SKSLLRDAIDTHPQHFDAAVRALEALERSG 285 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 68/239 (28%), Gaps = 13/239 (5%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 N A + L+ R L R A K ++ + Sbjct: 54 DPNEAISYYQRTLKSDPDRLDLRRGLATSFVRAKRFTEAASAWEKVTELKDSTHEDSVNY 113 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + +W A L+ + + R R ++A + + K D + Sbjct: 114 ADALIRSGDWDTAEKVLDTVPPTYETFKRYRLEAMMADANKEWRKADSFYETAIGL---- 169 Query: 255 LCDNSIMASICAAKSLIS--QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 + A + AE + + + +P + +L+ + + Sbjct: 170 ---TTTPAGAFNNWGYSKLTRGDFSGAEKLFGQAIRQDPT--LFTAKNNLVLARSAQRKY 224 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQ 369 + E + L ++ A+ G I + + A+ P+ L +E+ Sbjct: 225 TLPVVPMTQSERAQLLHTMALSAVRQGDIQTSKSLLRDAIDTHPQHFDAAVRALEALER 283 >gi|121998981|ref|YP_001003768.1| peptidase M48, Ste24p [Halorhodospira halophila SL1] gi|121590386|gb|ABM62966.1| peptidase M48, Ste24p [Halorhodospira halophila SL1] Length = 486 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 61/165 (36%), Gaps = 8/165 (4%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + ++A+ LN R +L+ R GD + E+ L S Sbjct: 326 EEGQHAQALALLN----TLSAIEGERLYVLLGRGEILRAIGDTEEALATYREARSLYPGS 381 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWK-VNPHPEIANIYTHLLSENTVGKLKRALRLE 318 A+ A++L++ + ++A +L + + + P++ + + + + + L Sbjct: 382 WAATYRLAETLLADDDAKEARRVLARATRGSSGSPQLLRLLADA-AHAAGREAEGYIALA 440 Query: 319 EINKESVESLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIF 361 E + E + V+++ A+ D+ A+K + Sbjct: 441 EHYRGRGEHRLAVAQLNNAIRHAGEDRYQRARAEALKARWTQHAA 485 >gi|332242055|ref|XP_003270199.1| PREDICTED: transmembrane and TPR repeat-containing protein 4 isoform 2 [Nomascus leucogenys] Length = 630 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 8/123 (6%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +++ V + EW A + ADKG+ A+ E++ Sbjct: 343 MLRCVVRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 398 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 399 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 454 Query: 314 ALR 316 Sbjct: 455 FEA 457 >gi|332305582|ref|YP_004433433.1| type IV pilus biogenesis/stability protein PilW [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172911|gb|AEE22165.1| type IV pilus biogenesis/stability protein PilW [Glaciecola agarilytica 4H-3-7+YE-5] Length = 329 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 19/200 (9%) Query: 190 VTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + Y+ +S+A L++ A A + + + + ++ Sbjct: 35 AAKTRLSLGLTYLENGNYSQAKFNLDKALAFAPNL----ADVHYGMAYYYQNVEEPESAS 90 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 +++ L + + L +Q +A+ K + + A Y +L Sbjct: 91 KAYQKAISLAPKNADIANSYGAFLCAQGDYEQAKEYFFKALNSDVYNSSAETYENLALCS 150 Query: 305 ------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357 ++ +G LK A +SL +++++ L+ A K+A Sbjct: 151 QSQNAFDDAIGFLKDA---LNHQPGRAKSLFLLAQVQLQANRFAAARDSLRRYEKVASVS 207 Query: 358 KEIFLLLAQIEQANSHNTDK 377 + L +IEQ Sbjct: 208 AQSLWLAVKIEQGAGAPKRA 227 >gi|319785717|ref|YP_004145192.1| HemY domain protein [Pseudoxanthomonas suwonensis 11-1] gi|317464229|gb|ADV25961.1| HemY domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 418 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 113/353 (32%), Gaps = 19/353 (5%) Query: 20 IVSHY----PEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHM 75 ++ V + G Y S V +++L + +L+ + R Sbjct: 23 WMAQQDPAQMGRVIVRTGGYDYSASLPVAIALLLAAMVLLAILWHLLRLPF-------RA 75 Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 + +G L G+ ++ ++ + L V+ A A Sbjct: 76 WGRYRKRQGRGRLIEGMRAVYGGRWSQGERLLGTAADDAEAGTLALAG--AVRAADARGD 133 Query: 136 YNIAHEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + L + + P R D +A A A + P + Sbjct: 134 EAAAEQWLAQLGSRDPVLHAVLKAERLLAHGRPVDAINALDVAE-AQPLPPRGLLLRARA 192 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + A E + L Q+ + I L A SL+ D +++A E++ Sbjct: 193 LAAVHRAGEAYGLLGALRQQGALPPDGLAALEIELAAASLQETDDANLLAER---WEAMP 249 Query: 255 LCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + A I A A+ + A LE+ V+ E+ ++Y L + + Sbjct: 250 KPLRTEPAVIGAYARRASALGWHDAAMRHLEQALDVHWDEELVDLYARLPVGHVDSRRAS 309 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 A R + + S LV ++++A QA A++ + + LL Sbjct: 310 AQRWLQQHPHSPALLVALARLARGQEQWPQARDFLHRALEEGAGADAWELLGD 362 >gi|261400184|ref|ZP_05986309.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970] gi|269210184|gb|EEZ76639.1| tetratricopeptide repeat protein [Neisseria lactamica ATCC 23970] Length = 616 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 100/321 (31%), Gaps = 75/321 (23%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 74 LLGGETALQKGQAGTALAAYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + + + L + + + + R LL+A++ Sbjct: 133 EPIPGGAQKRAGWLRNVLKEGGNQR------LDGLEEVLAQSDDVQKRRVFLLLAQAAVQ 186 Query: 237 ADKGDMIAS-----------------------------YHDAIESL----KLCDNSIMAS 263 D AS AI +L KL + + Sbjct: 187 QDGLAQKASEAVHRAALKYEHLPEAAVADVVFNVQVREKDKAIAALQRLAKLDTEILPPT 246 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---------LSENTVGKLKRA 314 + + + R+ IL ++ ++ ++ + ++ +LK Sbjct: 247 LVTLRLVA-----RRYPEILSGFFEQTDTKNLSTVWQEMEIMNLVSLRRPDDAYERLK-- 299 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368 L + N + + + A+ + + + ++ A ++ L A + Sbjct: 300 -VLLDANPNAD----LYIQAAILATNRKEDISVIDGYVEKAYGRGTEEQRSRAALTAAMM 354 Query: 369 QANSHNTDKILYWTQSALHAM 389 A+ + K+ W + + A Sbjct: 355 YADRRDYAKVRQWLKK-VSAP 374 >gi|114777009|ref|ZP_01452029.1| hypothetical protein SPV1_06594 [Mariprofundus ferrooxydans PV-1] gi|114552530|gb|EAU54990.1| hypothetical protein SPV1_06594 [Mariprofundus ferrooxydans PV-1] Length = 562 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 69/199 (34%), Gaps = 8/199 (4%) Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 I P V V A + +A Q A + L + D Sbjct: 43 AIQPGNADVANIRGIVCVQAGDKMQAEQLFVQAINAAPKRAEFHNNLGKLYLSQKLF-TD 101 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EI--ANI 298 Y A+ + + + SL+ + KA ILE++ P+P ++ A Sbjct: 102 AAERYRSAMHYDRNSLDL---KLGYCASLVGMGEPEKALPILEQLRSKKPNPPDLFMALF 158 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-R 357 Y + L +L + + ++ ++ ++ G + +A + A+ + P Sbjct: 159 YAYQGLGRIDDALACLDKLIAGDADHFDARFQRGQLFMQQGRMQEAEDELHAALALRPDY 218 Query: 358 KEIFLLLAQIEQANSHNTD 376 + + +L ++++ S + Sbjct: 219 SKAYSMLVEMKKFTSDDDA 237 >gi|303238712|ref|ZP_07325245.1| transcriptional regulator, AraC family [Acetivibrio cellulolyticus CD2] gi|302593831|gb|EFL63546.1| transcriptional regulator, AraC family [Acetivibrio cellulolyticus CD2] Length = 791 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 71/183 (38%), Gaps = 23/183 (12%) Query: 91 GLMSIAAHNIPLARKMHSYVSQ--QHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEMM 146 G+++ N A KM + + + E + L +++ +++ Y+ A + E Sbjct: 443 GMVARGKGNFGQAMKMFNEHLKICEELDDKEGISNALINIAEMSRSQQNYSFARDYYERC 502 Query: 147 LQIPATREFAVYSLY--------FESCRIGDLNSAQRYATKALDI------SPDAPWVTE 192 L++ RE SL + GD + A + ++L++ + + W+ Sbjct: 503 LKL--VREMGYKSLIARTLKDLGEIARYEGDFDKAGQLFQESLEVLEESKDNGEMMWLYR 560 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + + + +S A + + + +R I LI L ++ + + I + Sbjct: 561 NMAELEMQKQCYSSAKELYFKGLR---VFRGSRQITLIYALLVFEGLAEIAFAQEELIMA 617 Query: 253 LKL 255 +L Sbjct: 618 ARL 620 >gi|169829329|ref|YP_001699487.1| hypothetical protein Bsph_3881 [Lysinibacillus sphaericus C3-41] gi|168993817|gb|ACA41357.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 219 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A +++Y A + ++ + + D A+R+ KA+ + A Sbjct: 10 AFQDKRYEEAAQLFTKAIEAEPENAIGYVNFGNLLAVLEDTERAERFFQKAITVDETAAT 69 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y A+ ++ A+ Q K+ E A + + + Sbjct: 70 AYYGLANLYYNAERYAEAVKLYEQALKHHIEG----ADVYYMMGKCFERMENSKLALPYL 125 Query: 250 IESLKLCDN-----SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLL 303 ++++ A + A + Q K ++ ++++E+ W + H + +Y + Sbjct: 126 QRAVEIAPEDTQIRLAYAIVLCALEMFEQGK-KELDLLIEQDWNNADAHYNLGVLYA-VS 183 Query: 304 SENTVGKLKRALRLEEINKESVESLVI 330 +E T + + + E ++ I Sbjct: 184 TEQTEDAMYHLKQAFTLQPEYDQARYI 210 >gi|17229291|ref|NP_485839.1| hypothetical protein alr1799 [Nostoc sp. PCC 7120] gi|17130889|dbj|BAB73498.1| alr1799 [Nostoc sp. PCC 7120] Length = 402 Score = 41.8 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 4/158 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A L I R A Y+L G L A A+++ P Sbjct: 160 ALQQQGKKEGAITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAVNLEPSKI 219 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + K + A + A +G + Sbjct: 220 NAHHNLAIALQQTGKMEEAIVAYREVLK----LDPKNAAAYSSLGSLMAMQGRPEEAIAA 275 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++++ + +A +L +Q + +KA ++ Sbjct: 276 YTQAVRQDPKNALAYYNLGITLYNQGELQKASNAFKRA 313 >gi|284052546|ref|ZP_06382756.1| glycosyl transferase family protein [Arthrospira platensis str. Paraca] Length = 238 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 12/206 (5%) Query: 160 LYFES---CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 LY ++ + A AL+ P+ + + L E+ +A + + Sbjct: 12 LYQQANTYLAKQQFSEAIASCKTALEYHPNLAPAYKIIGTVEQLQGEFDQAEASYKKALE 71 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 ++ A L + +N + I+ Y AIE + + A AK N+ Sbjct: 72 IEPDFAEVYANLGSLFAQQN-EWQSAISFYEKAIE---IKPDFGGAYRNLAKVFGQINQP 127 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSE-NTVGKLKRALRLEEIN----KESVESLVIV 331 KA L K + P Y + + GK +A+ L E + Sbjct: 128 NKANYCLLKAIDIEPQNIKLTEYIEVAQTLDNQGKFTQAIALYTKAMEIYPNVAEIHYNL 187 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + + A A+++ P Sbjct: 188 GETFVNCQQWKSAITAYKQALEMNPD 213 >gi|283852059|ref|ZP_06369334.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] gi|283572609|gb|EFC20594.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio sp. FW1012B] Length = 788 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 35/210 (16%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 E+ R A+ +KA+ + E VQ + A + Sbjct: 46 EALRQ--PGPAEGAFSKAVALEKGLLEAWEGRVQSLLALGRCDEAAKDATRVLTRQP--G 101 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +L + + A G + +L A++ A+ L+ Q + +A + Sbjct: 102 HVPMLLALGTARHQA--GRRDEAAEAYRRALAAAPGQPFATVSLAQILLEQGQAGQALAV 159 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----------------KESVE 326 L+ + LKRA L + + Sbjct: 160 LDD-------------CPAGEQRDGRVALKRAEALWALARRDEARAVAEAAAARFPQDDA 206 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + E G + A A A +AP Sbjct: 207 VRATLGRYCYEAGETEAAVAWLRQAAHLAP 236 >gi|156740598|ref|YP_001430727.1| hypothetical protein Rcas_0580 [Roseiflexus castenholzii DSM 13941] gi|156231926|gb|ABU56709.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941] Length = 319 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 4/120 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R+ D +A+ A+ P + + + A+ L+ + + Sbjct: 180 RLNDRTAAREAFDAAIRARPQHVDALYERALLHYAVGDLNAALADLDTALRLSP----RA 235 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A AR L +GD ++ D ++L L + A I A + Q A L++ Sbjct: 236 ANAYYARGLIRHTQGDPRSAIADFGQALLLRPDYPEALIARAATYAEQGNITAARADLKR 295 >gi|77747992|ref|NP_639573.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761345|ref|YP_245384.2| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. 8004] Length = 901 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%) Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 K +R RA L R L+ + + E+LKL + +A+ Q + + Sbjct: 780 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 839 Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A LE K++P + + Y + + K + + + ++ Sbjct: 840 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 897 Query: 334 I 334 + Sbjct: 898 L 898 >gi|333025910|ref|ZP_08453974.1| hypothetical protein STTU_3414 [Streptomyces sp. Tu6071] gi|332745762|gb|EGJ76203.1| hypothetical protein STTU_3414 [Streptomyces sp. Tu6071] Length = 454 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 68/237 (28%), Gaps = 14/237 (5%) Query: 129 IALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A A + L P FA Y L + GD +A A L +P Sbjct: 193 AAELRGDTTAARSAMRRALDAANGPDDTSFARYYLSELAFGSGDAETALSEAEAGLRATP 252 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 AP + +A + A L++ + + + SL + + + Sbjct: 253 GAPSLLQARARARAALGRGQAATEDLSKAVQALPLPEYLVQLGELYDSLGQHREAERQFA 312 Query: 246 YHDAIE----SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A + + + +S AA R+A + + P + + Sbjct: 313 VLRAEQRLFTANGVALDSD-----AALFEADHGDPRRALTLARAGLRGRPFLDSHDALAW 367 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAP 356 L +N + + + +L + + +G A A+ P Sbjct: 368 ALHKNGRDREALTEADRALALGTRNALFTYHRAMILESLGDKAAARTGLRTALATNP 424 >gi|319643549|ref|ZP_07998170.1| hypothetical protein HMPREF9011_03771 [Bacteroides sp. 3_1_40A] gi|317384813|gb|EFV65771.1| hypothetical protein HMPREF9011_03771 [Bacteroides sp. 3_1_40A] Length = 246 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 LNQK +++ +++NR L AR+ + + D E+ KL Sbjct: 140 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 199 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295 + + + +SQ KKR+A V EK ++ P PE+ Sbjct: 200 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 238 >gi|302692584|ref|XP_003035971.1| hypothetical protein SCHCODRAFT_84511 [Schizophyllum commune H4-8] gi|300109667|gb|EFJ01069.1| hypothetical protein SCHCODRAFT_84511 [Schizophyllum commune H4-8] Length = 289 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 14/230 (6%) Query: 135 QYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 Y A + + R + + SL + + +L+ A + L+I+P AP Sbjct: 11 NYAAAERAFGAVRTLEPYRLWDMEIYSSLLWNVRKAEELS---YLAQELLNINPHAPQGW 67 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A + L ++ ++A+ + + + + A E D+ D + + Sbjct: 68 LAAGNLFSLQRDRAKALACFRRAFQ----LDPSCAYAYTLSGQELLDE-DADRAINFFQS 122 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK- 310 +L++ A + +K R AE K ++NP + + E + Sbjct: 123 ALRVDARHYNAWYGLGTCYMRMSKIRMAEFHFRKAVEINPKNAVLLGCLGMAVERRNDRP 182 Query: 311 --LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 LK E+ ++ +KI + M + A + +P + Sbjct: 183 GGLKLFNEAVELQPDNALVRYRRAKIYIAMRRYEDAISDLEFLRNTSPEE 232 >gi|284036394|ref|YP_003386324.1| hypothetical protein Slin_1475 [Spirosoma linguale DSM 74] gi|283815687|gb|ADB37525.1| TPR repeat-containing protein [Spirosoma linguale DSM 74] Length = 467 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 3/87 (3%) Query: 131 LAERQYNIAHEKLEMMLQIPATRE--FAVYSLYFES-CRIGDLNSAQRYATKALDISPDA 187 E + + E ML ++ VY E GDL+ A + A L+ P A Sbjct: 7 EREGDIKESIRRFEQMLDQQQSQFFDLDVYEQMVEHYLNQGDLDKALKAAESGLENFPYA 66 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQK 214 + Q + + ++ L + Sbjct: 67 LELMLDKAQIMANFQRFDESLDLLERA 93 >gi|219850611|ref|YP_002465044.1| TPR repeat-containing serine/threonine protein kinase [Chloroflexus aggregans DSM 9485] gi|219544870|gb|ACL26608.1| serine/threonine protein kinase with TPR repeats [Chloroflexus aggregans DSM 9485] Length = 863 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 116/385 (30%), Gaps = 48/385 (12%) Query: 39 TSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIA-A 97 V + L + I LF + R P L + TG ++A A Sbjct: 373 VGILVGVIALGLLIGGGIALFVLFRPSSPTPTSLTDTTAS--------FISTGDTALAHA 424 Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE--- 154 + A + + ++ +L LA+ ++ A + ++ +R Sbjct: 425 GGLTEAIEAYRKAVAANSDDMTAHAHL--AGALLAQGSWSEAIAVTDPLINATDSRAQAI 482 Query: 155 -FAVYSLY-------FESCRIG------DLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + ++ G D N A +A A ++ DA + + Sbjct: 483 GLGIRGYAYLHLGNRVQARISGERAIKADDNEALGHALYAAVLATDAADSRDNDLMDRA- 541 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARS--LENADKGDMIASYHDAIESLKLCDN 258 AI + + N+ A L+ + + + D A+ SL+ + Sbjct: 542 ----FNAIGSAEDRLAASDPLNQALAHALLGWAFSRDFLLRDDPNT-LEQAVSSLEAAID 596 Query: 259 SIMASIC----AAKSLISQNKKRK-AEVILEKIWKVNPHPEIANI---YTHLLSENTVGK 310 ++ ++ A L+ ++P A + + T Sbjct: 597 RFPNLALFHYELGTIYLTTDQDSTLARDELQNALTLDPTFSAAQAALGWLAYRDDQTDAA 656 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIE- 368 + + ++N + +L + ++A + + +QA + P + L + + Sbjct: 657 KQAFQQALQLNPKEGLALFGLGRLAFDDENFEQALDYFQQTIDANPDFASAYAYLGETKL 716 Query: 369 --QANSHNTDKILYWTQSALHAMPD 391 + + + W A A + Sbjct: 717 FTGFQNADNETAGDWYSQAEEAYRE 741 >gi|83814353|ref|YP_445962.1| TPR repeat-containing protein [Salinibacter ruber DSM 13855] gi|83755747|gb|ABC43860.1| tetratricopeptide repeat domain protein [Salinibacter ruber DSM 13855] Length = 627 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 84/241 (34%), Gaps = 15/241 (6%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDIS 184 Q + ++Y A +E + P T V L ++ + G+ +A +AL ++ Sbjct: 86 QAYESLKRYRDALRLVEERIGSPPT----VSRLAEKARLQYQKGEGEAADATWDRALALA 141 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P+ P V +++ +AI L + + + + R L L+ G A Sbjct: 142 PNEPQTYRTVYNTLAELRQFRKAIAVLQEGRAALDQPDAFRTELAHLYGLD----GQFEA 197 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE-VILEKIWKVNPHPE---IANIYT 300 + + + L N + ++ + Q + A +L++ + NP E + Sbjct: 198 AMQEYVAFLAEAPNRLNYVRSRLRTFVEQGQGIAASIQVLQQTVQENPLNEAYRTLLAWL 257 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 H ++ L+ + + L ++ A + A + PR + Sbjct: 258 HTEQDDYAAAFDEYRALDRLGDRQGQILFGFARRAADAQRYGVATRACEAIQEQYPRSGV 317 Query: 361 F 361 Sbjct: 318 A 318 >gi|167570099|ref|ZP_02362973.1| TPR domain protein [Burkholderia oklahomensis C6786] Length = 322 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 6/138 (4%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL A Q + +L P L S GD ++A + T+ Sbjct: 83 PDTILLRADALRATDQAAASTVAYRQLLNTP-LAARGYRGLGLLSGASGDFDAASQALTQ 141 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++P + + + + + A L + E ++N +L +L Sbjct: 142 ATALAPTDSLTLSDLAYARMRSGDVAGARVPLMKA----AELDQNNPKILSNLALFLLAT 197 Query: 240 GDMIASYHDAIESLKLCD 257 G + + LKL Sbjct: 198 GQTRDALGL-MNQLKLAP 214 >gi|116626628|ref|YP_828784.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116229790|gb|ABJ88499.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 271 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 53/203 (26%) Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS----------------- 269 + AR+ + + E+L+L N + A A+ Sbjct: 25 LAAYARADRMFREHRFQDAMDAVDEALRLNPNLVPALTLRARLAMAANRYDVARQSLERA 84 Query: 270 -----------------LISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------LSEN 306 QN+ A LEK +N H A +Y L ++ Sbjct: 85 IAADPQSWYARFLYGFHFYEQNEMPAAIAALEKARDLNAHDPPAALYLGLAYEAVGRADE 144 Query: 307 TVGKLKRALRLEEINKE-SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + +RA+ LEE + VE+L+ S+++L +G D A A A KI P Sbjct: 145 ALQLYRRAIELEEASGALHVETLLTASRLSLLLGRFDDAAGLAQRAAKIDPASR------ 198 Query: 366 QIEQANSHNTDKILYWTQSALHA 388 + + W + A+ A Sbjct: 199 ------DPHFELARVWLKKAVSA 215 >gi|206578353|ref|YP_002236097.1| outer membrane autotransporter barrel domain protein [Klebsiella pneumoniae 342] gi|206567411|gb|ACI09187.1| outer membrane autotransporter barrel domain protein [Klebsiella pneumoniae 342] Length = 1350 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 98/367 (26%), Gaps = 79/367 (21%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 + + +R +A G ++ + N A++ V Q + + L + IA Sbjct: 261 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 315 Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176 Y A + L + Y ++ + G+++ A Sbjct: 316 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 375 Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 A A L + D P + + + + L + + Sbjct: 376 LAQQSGARGASAKLFRADVLRHNKDLPQAEQTLRSLLSDDPQNAAGRENLYYVLREQNKS 435 Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258 +A+L ++ G+ + E + + Sbjct: 436 AEAQAMLQTLPQNLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPD 495 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 + A+ L +A ++ ++ P +Y L + G ++A L Sbjct: 496 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNNALYAAALFASENGAWQQAQTLL 553 Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359 ++ + ++ L G+ A P+ + Sbjct: 554 ARIPGGSQTSDMRDLRQRVNYNLQLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGK 613 Query: 360 IFLLLAQ 366 + LLA+ Sbjct: 614 LARLLAE 620 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 91/277 (32%), Gaps = 29/277 (10%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188 A ++ E +LQ A+ + + + R GD +A +Y ++A D+ DA Sbjct: 283 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 342 Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +A+ + + + ++Q + + + L AD Sbjct: 343 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGARGASAKLFRADVLRHNKDLP 402 Query: 248 DAIESLK--LCDNSIMASICAAK-----SLISQNKKRKAEVILEK-----IWKVNPH--- 292 A ++L+ L D+ A+ + L QNK +A+ +L+ K+ P Sbjct: 403 QAEQTLRSLLSDDPQNAA---GRENLYYVLREQNKSAEAQAMLQTLPQNLQQKLQPRVVA 459 Query: 293 --PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P A + S N G + + + ++++ + G+ +A + Sbjct: 460 GMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSL 519 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 A + A + + + + Sbjct: 520 MSAAYRPGASNNALYA-AALFASENGAWQQAQTLLAR 555 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 88/266 (33%), Gaps = 43/266 (16%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--A 180 L + LA+ A L M P L GDL +A + Sbjct: 577 QLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGKLARLLAESGDLTTAVSLVRNNIS 636 Query: 181 LDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSL 234 +S +A + AV+ Q L A L + A A + +I + Sbjct: 637 SGVSGNAGDYADQIAVLNQAGLTG---EAQNLLTNPQLQASSTPTQLASIRNGYVINEAD 693 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 ++G+ A+Y I +++ + A+ K K + Sbjct: 694 RLREQGNYAAAYDKLIRAMQSDPQNTDLMFAMARLY-QSGKMNKEAGV------------ 740 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +Y +L++ +T + RA + +AL G+ D+A + ++ Sbjct: 741 ---VYDYLMTRDTPNQDARAGAI---------------DVALSAGNNDRA-EQLAGGLRQ 781 Query: 355 APRKEIFLLLAQIEQANSHNTDKILY 380 + LLLA++ +A H+ + Y Sbjct: 782 DNSPDRLLLLARVAEAQGHHQQAMTY 807 >gi|192359545|ref|YP_001981823.1| peptidase family M48 family [Cellvibrio japonicus Ueda107] gi|190685710|gb|ACE83388.1| Peptidase family M48 family [Cellvibrio japonicus Ueda107] Length = 490 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 62/215 (28%), Gaps = 29/215 (13%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + L + GD A A++ A++ A +++ Sbjct: 171 LAGLVLAANSEGDAGIA-------------------AIMGTQAAAQQ---ARLSFSRQ-- 206 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 N +E +R +I L+ +M A + ++ + + + Sbjct: 207 NEQEADRIGMQTMIEAGLDPYAASEMFEEMMRANRLNRRPPEYLLTHPVSERRVADARN- 265 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVE-SLVIVSKI 334 +A K + N ++ E T R + +S + S + Sbjct: 266 -RAMKYPRKAYPDNLEYQLVRARIRANQEETPQIAARMFKSELDRESDSPDASRYGWALA 324 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIE 368 D A ++ P + + ++ A IE Sbjct: 325 LSRSSQFDAAREALAPLLEKDPTRVTYQIMRADIE 359 >gi|209884514|ref|YP_002288371.1| TPR domain protein [Oligotropha carboxidovorans OM5] gi|209872710|gb|ACI92506.1| TPR domain protein [Oligotropha carboxidovorans OM5] Length = 599 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 65/197 (32%), Gaps = 11/197 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 +IG L A+ Y +AL P + ++ + I + + A N Sbjct: 32 QIGRLAEAEAYYREALAAPRQQPDALHLLGVVFMQTGRLAPGIELI----RRAIGLNGTN 87 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 GD+ + +L+L + A L+ Q K +A V + Sbjct: 88 GEYFSNLGAGLNRLGDLAGAADAFRRALELKPDFATAFHDYGNVLLKQGKLDEALVSFTR 147 Query: 286 IWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 ++P H + A + L I ++ E+L + + L M Sbjct: 148 AIGIDPFYTNAHHQRAKVLQRFGRH--AEALAAFNEALAIKPDNAEALCRRALVLLAMKR 205 Query: 341 IDQAHAKAMLAMKIAPR 357 D+A A A A +I P Sbjct: 206 FDEALASAEEAKRIDPS 222 >gi|168701913|ref|ZP_02734190.1| hypothetical protein GobsU_20473 [Gemmata obscuriglobus UQM 2246] Length = 1470 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 15/198 (7%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + L K+WS A+ L + + + LL+A + A + L Sbjct: 379 RLAALKKDWSTALRLLEEARPSIARAPALNKKLLVALAACYAAVLNPDKQLEYCRTVLAT 438 Query: 256 CDNSIMASICAAKSLISQNKKRKAE---VILEKIWKVNPHP------EIANIYTH--LLS 304 + A + A++L N+ +A + +++N H E+ ++ Sbjct: 439 EPDYPPAVVGEAEALAKLNRVGEALPRYRRIVNGYRLNEHRTELVRLELYHVLAQPGASG 498 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK----EI 360 E + A++ + + VE V+ S G DQ + L + P+ Sbjct: 499 ERDWDRFNEAVKPVPVAERPVEMQVLCSDALAAQGKTDQGADELRLWIDKNPKSPKANAA 558 Query: 361 FLLLAQIEQANSHNTDKI 378 F+ LA++ + + Sbjct: 559 FVALARLNTGGTAESALA 576 >gi|145345890|ref|XP_001417432.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577659|gb|ABO95725.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 209 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 54/167 (32%), Gaps = 12/167 (7%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 LA+ Y + + A L A+Y+ Sbjct: 45 GKLAKASTVYAMAIRRDPVSAVAHFNIGNAHFLAGDAASARVSYLAALDREPNYFKALYN 104 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKK 215 L IG + A+ + +A+D P+ T A+ YV +W +A LN Sbjct: 105 LAIVIDSIGSVGEAKEWMKRAVDCRPNDSRATYALALLYVKLGQWKKAEYHFEQTLNLDA 164 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 K+A + + +GD S + + +L++ ++ A Sbjct: 165 KHAPSQVKLGNLA--------FRRGDFQRSGANYLNALEVDPGNVEA 203 >gi|124006390|ref|ZP_01691224.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] gi|123988047|gb|EAY27718.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC 23134] Length = 610 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 42/145 (28%), Gaps = 18/145 (12%) Query: 126 EVQIALAERQYNIAHEKLEMMLQ-----IPATREF--AVYSLY--FESCRIGD--LNSAQ 174 L + A E + ++ PA + Y ++ D A Sbjct: 449 MGMAYLMKGDNAKAEESFKKAVEIGAGDNPAMTGLLNGIKGYYAIQQATSRDDGKYKEAY 508 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 A P+ + + A ++ +A N K A A ++ Sbjct: 509 ELLASAASTVPNY---FNKGLAYLLEANDYEQAKASFNAAAKMND----KDATTFYALAV 561 Query: 235 ENADKGDMIASYHDAIESLKLCDNS 259 A +G+ + ++++L + Sbjct: 562 VAARQGNEGELTQNLKKAVELKSDL 586 >gi|115752602|ref|XP_797370.2| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] gi|115939107|ref|XP_001195096.1| PREDICTED: similar to Transmembrane and tetratricopeptide repeat containing 3 [Strongylocentrotus purpuratus] Length = 844 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 83/234 (35%), Gaps = 15/234 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV-TE 192 Q + A + Q+ + Y+L + + A ++ +A++I P Sbjct: 584 GQLDEAESLYQQAAQLEPLKADIHYNLGIVAMKKRQKPKALKHFDRAVEIDPKHKMALYN 643 Query: 193 AVVQQY----VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + ++ AI L + + E + + L + D D + Sbjct: 644 SALYIQESGNAARRQ--DAIKRLQKVIEIDPESEMSYSTL----GMLAVDDNDNPGALQY 697 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENT 307 ++L++ +S A A +A+ LE + + +P H + + ++ + Sbjct: 698 YQKALEINPSSRHALFNIAMIHSDDKHPLQAKPYLENLLQHHPNHTKSMLLLGDIMLNSL 757 Query: 308 VGKLKR---ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 +K R+ ++ +V++ + I ++ G + + ++ AP Sbjct: 758 QDVIKSQQLFQRIVDLEPSNVQAQHNLCVIMVQKGLFMEGEQCLLDVLERAPHA 811 >gi|27379563|ref|NP_771092.1| hypothetical protein blr4452 [Bradyrhizobium japonicum USDA 110] gi|27352715|dbj|BAC49717.1| blr4452 [Bradyrhizobium japonicum USDA 110] Length = 696 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 62/162 (38%), Gaps = 11/162 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A L + A + + A +A K + + + +++ L N Sbjct: 20 QGGRLEEAQQLLERAI--AIDPRSHEAHNNLAAVYVVLQKFEAARACQE--KAIALKPNF 75 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-HLLSENTVGKLKR----A 314 A +L++ N +A + ++ ++ P+ A+ + L+E + +L R Sbjct: 76 TPALTGLGNTLLNMNLPEQAIEMYDRAIRLK--PDYADAFCNRGLAELALRQLDRARQSF 133 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 R +VE+LV + +E+ + D+A A+ I P Sbjct: 134 ERALLFQPRNVEALVGKGLVNIELKNFDEAKGALEAALAIRP 175 >gi|330811721|ref|YP_004356183.1| hypothetical protein PSEBR_a4760 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379829|gb|AEA71179.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 574 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 8/133 (6%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ ++L GD + ++ + A+ L N+ +A +LEK Sbjct: 188 LIFGKALLLQQDGDTQGALTLLEDNPPEAGEVAPI-LLRARLLQGLNRGDEALPLLEKSI 246 Query: 288 KVNPHPE---IANIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K +P+ + Y +L EN L + E E ++ + LE + + Sbjct: 247 KK--YPDDKRLRLTYARMLVENNRMDDAKVEFSSLVQQYPEDDELRYSLALVCLEAKAWE 304 Query: 343 QAHAKAMLAMKIA 355 +A + Sbjct: 305 EAKGYLEDLIARE 317 Score = 37.2 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 16/254 (6%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ-RYATKALDISPDAPWVTEAV 194 + A LE ++ + + A +L + D SA YA + +A Sbjct: 303 WEEAKGYLEDLIARESHVDSAHLNLGRIAEERNDPESALIEYAQVGPGNDYLPAQLRQA- 361 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + + A + L ++ + ++ L + + A +++ ++LK Sbjct: 362 -DILIGNGKTADAQSRLAVQRDSQPDYGIQ---LYLIEAETLAANNQGDKAWNVLQQALK 417 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR- 313 + + A +N + E L I + +P +A + L + R Sbjct: 418 QYPDDLNLLYTRAMLAEKRNDLAQMEKDLRLIIQRDPDNAMA---LNALGYTLSDRTTRY 474 Query: 314 ------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 + +IN E L + + +G++D+A A++ P +E+ L ++ Sbjct: 475 DEAKLLIEQAHQINPEDPAVLDSLGWVNFRLGNLDEAERLLRQALERFPDQEVAAHLGEV 534 Query: 368 EQANSHNTDKILYW 381 AN + W Sbjct: 535 LWANGKQREARQIW 548 >gi|331238707|ref|XP_003332008.1| pol II transcription elongation factor [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310998|gb|EFP87589.1| pol II transcription elongation factor [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1107 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 13/169 (7%) Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS-----AQRYATKALDISPDAPWV 190 A E + L+ A L ++ R D S + AT A+++S P + Sbjct: 56 TRAAMEYWKRDLKQDAISLAN-QGL--QALRDQDRPSECLPLLCQLATYAINLSRGLPTL 112 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSLENADKGDMIASYH 247 + + A L + E +R + ++L AR+ + + Sbjct: 113 KLETPEYDTIPPAQPTADETLEKAAHYINEASRIDSRNPLVLDARATLYLAQKHYDQALT 172 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH--PE 294 E LK + A + A+ L + R A + +++ K+ PH P+ Sbjct: 173 ACEEILKERPTHLPALLGKARVLFHRKFFRPALKLYQQVLKLAPHVLPD 221 >gi|293415818|ref|ZP_06658461.1| yphG protein [Escherichia coli B185] gi|291433466|gb|EFF06445.1| yphG protein [Escherichia coli B185] Length = 1093 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 35/115 (30%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHGLNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L SP V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRASPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|197362290|ref|YP_002141927.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|207856779|ref|YP_002243430.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197093767|emb|CAR59241.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|206708582|emb|CAR32903.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246898|emb|CBG24715.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301158236|emb|CBW17735.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 371 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 + + A + +++ R AV L D +A Y A + D Sbjct: 65 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 118 Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 119 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 178 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + NS SI + +++ KA L+++ + L Sbjct: 179 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 229 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351 +SE +L + + + V + L + I +A + A Sbjct: 230 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 289 Query: 352 -MKIAPRKEIF-LLL 364 ++ P +F L+ Sbjct: 290 QLQRHPTMRVFHKLM 304 >gi|166710805|ref|ZP_02242012.1| hypothetical protein Xoryp_04915 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 562 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 85/249 (34%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L +A+ Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 372 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 429 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVGGKQDEARRYFDEAR 544 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 545 RLDPDNRAL 553 >gi|116623761|ref|YP_825917.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226923|gb|ABJ85632.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 775 Score = 41.8 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 37/320 (11%), Positives = 88/320 (27%), Gaps = 52/320 (16%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 I AR + ++ +NE L + + A L +L+ A+ Sbjct: 368 EIQRARDEFGALLKRDPQNNELRFNL--ARASRQAGDETQARSALVEILRRDPNHRNALR 425 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + + A +YA + + + P + L + L + Sbjct: 426 ELADLEIQNQRPDEALQYAERLIALEPANIGARLVRTAAWALRGPKTEVRAELRRMIAER 485 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNKK 276 + A + + D+G+ + L+ +Q + Sbjct: 486 PDM----AEPALQMATLEMDQGNYAEAERSYQR-LRATPKFDIRPLRGLVV-VYQAQGQS 539 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 RKA ++++ ++ +++ A Sbjct: 540 RKALDLVQQE--------------------------------SKRTNDIQVRTLLATTAA 567 Query: 337 EMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSH-NTDKILYWTQSALHAMPDPLW 394 + G +D A + A + P + + + Q+ + + Y L A D Sbjct: 568 QAGDLDLALSTAQAILNDIPQDPKNLIFMGQLLEQKGQMEQAIVQYDRARQL-APKD--- 623 Query: 395 ISDDGYLSSVWLPLSPISKT 414 G +++ + + Sbjct: 624 ----GLVAARYGLALVNTGR 639 >gi|325281165|ref|YP_004253707.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter splanchnicus DSM 20712] gi|324312974|gb|ADY33527.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter splanchnicus DSM 20712] Length = 317 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 10/139 (7%) Query: 122 VYLLEVQIALAERQYNIAHEKLEM---MLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 LL ++ L+ R Y + +E ++ + E+ GD +A++ Sbjct: 162 ALLLRAEMMLSTRDYKDGLQDIEKVIGLMPEEENAFL-IRGRLHEAL--GDDQAAEQDYE 218 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 ++P + Y+ ++ +AI ++ + E+ R R Sbjct: 219 VVTGLNPFNEQAYLQLGTLYIAREQPDKAIELFDEAIELKPEFAR----AYSERGRAKLM 274 Query: 239 KGDMIASYHDAIESLKLCD 257 KGD S D ++L+L Sbjct: 275 KGDKNGSVEDLKKALELNP 293 >gi|260827022|ref|XP_002608464.1| hypothetical protein BRAFLDRAFT_231915 [Branchiostoma floridae] gi|229293815|gb|EEN64474.1| hypothetical protein BRAFLDRAFT_231915 [Branchiostoma floridae] Length = 1133 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 55/158 (34%), Gaps = 9/158 (5%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-LAERQYNIAHEKLEMML--QIPATRE 154 ++ A ++ + +++ + + L + E + A + L L ++ Sbjct: 975 GDMQQAEEVGTRIAKALAKNQTSWILLSMAALYWRVEGNGDRAIDCLRQALHFSQHRMKD 1034 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+ + R G + A+ A A++I+P + Y + +A+ + Sbjct: 1035 VALIGMANIFHRTGLWHDARVVAQMAVEIAPHLVVNHFTLANIYAAMGDIDKALKYYEMT 1094 Query: 215 KKNAKEW----NRNRAI--LLIARSLENADKGDMIASY 246 E+ R R + ++ + A+K + Sbjct: 1095 VIIQGEFAPAMERLRTLQCNILMKRQREAEKDQQKDAR 1132 >gi|121634647|ref|YP_974892.1| putative periplasmic protein [Neisseria meningitidis FAM18] gi|120866353|emb|CAM10096.1| putative periplasmic protein [Neisseria meningitidis FAM18] Length = 616 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 74 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 132 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 133 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 186 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 187 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 244 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 245 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 304 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + + A ++ + A + A+ + Sbjct: 305 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 360 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 361 YTKVRQWLKK-VSAP 374 >gi|315125213|ref|YP_004067216.1| HemY [Pseudoalteromonas sp. SM9913] gi|315013726|gb|ADT67064.1| putative HemY [Pseudoalteromonas sp. SM9913] Length = 369 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M+ LI + I LV+ V V I++ N + + A L + Sbjct: 1 MIGLIIFIVAIVLVLAITPFVLDEKGYVLISFNNTTIEGTIVSFCIMAALSAAALYLTYK 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSI 95 + R+ LS H R+ ++ + A+ L S+ Sbjct: 61 LVRYCLSIYRNTKHGFFARSQERKHAAIEQALWSL 95 >gi|311068774|ref|YP_003973697.1| hypothetical protein BATR1942_09165 [Bacillus atrophaeus 1942] gi|310869291|gb|ADP32766.1| hypothetical protein BATR1942_09165 [Bacillus atrophaeus 1942] Length = 423 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 89/253 (35%), Gaps = 16/253 (6%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP-ATREFAVYSLYFESC 165 + + +E ++ ++ + Y A + + + V+ ES Sbjct: 122 QKLLKAKSILEDEPVIDFALGELYYTQGAYAKAIQYFKRTAEEQSEIGGVNVHQRLAESL 181 Query: 166 -RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+L A + KA++ +P+ + A + + + ++ + KE + + Sbjct: 182 SASGELEEAIPWYEKAVEETPE----PNTIFGYGFTASQ-AGFVKTAIKQLSDLKEIDPS 236 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + L + + +G + A E + + + + AAK + ++ + +L+ Sbjct: 237 YSSLYMPLAESYEAEGMYEEALKTAKEGISYDEYNKELFLYAAKMTLKIGNVQEGKKLLQ 296 Query: 285 KIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++P H +A +L E+ + + +E + ++ E+ Sbjct: 297 EALALDPGYVEALHTLLA---VYLKEEDYELIIDLIQEVRGYGEEDPKYNWYLASAYTEL 353 Query: 339 GSIDQAHAKAMLA 351 ++A A Sbjct: 354 EKYEEAKKCFEAA 366 >gi|310795048|gb|EFQ30509.1| DnaJ domain-containing protein [Glomerella graminicola M1.001] Length = 520 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 15/200 (7%) Query: 118 NEYLVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSA 173 + + LL Q L++ Q + A + + + L+ + +G N A Sbjct: 30 DTPVSSLLATAQSHLSKGQTSDALVYYDAAVARDPSNYLT---LFKRATTYLSLGRTNQA 86 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT--FLNQKKKNAKEWNRNRAILLIA 231 + L + P + + +W A L +K + E A Sbjct: 87 TDDFNRVLSLKPGFEGAHVQLAKIKSKTADWDGAREQYILARKDPTSPELVALDEAQGAA 146 Query: 232 RSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-- 288 R E A+K GD A A E++ + +I ++ + + + L + + Sbjct: 147 RLAEMAEKSGDWEACVGHAGEAIMTANRAISLREMRSRCRFQRGEVEEGMGDLHHVLQMR 206 Query: 289 ---VNPHPEIANIYTHLLSE 305 +PH IA I + L + Sbjct: 207 PGDTSPHITIAAITFYALGD 226 >gi|295398931|ref|ZP_06808913.1| TPR repeat-containing protein [Geobacillus thermoglucosidasius C56-YS93] gi|294978397|gb|EFG53993.1| TPR repeat-containing protein [Geobacillus thermoglucosidasius C56-YS93] Length = 420 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 72/238 (30%), Gaps = 46/238 (19%) Query: 124 LLEVQIALAER----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L+ + + + E M P + L +G + + + K Sbjct: 106 LIAADLYQMQGLEEVSERKLQQAYEKMPDEPIIQFA----LAELYFSMGQYSKSIPFYEK 161 Query: 180 ALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 L E + + L E+ +A+ + ++ + + L + Sbjct: 162 VLKKEKTIAGTHIPERLAEALSLCGEFEQALPYYDEALQEKLDSR-----TLFGYGVTAF 216 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + E L + + AK+ + + LEK + EIA Sbjct: 217 QAEYYQTAIEKLSELKALDPEFVPLYLYLAKAYEHEGQ-------LEKSY------EIAK 263 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 H+ + E L+ K+AL++G +D+A + A++I Sbjct: 264 EGIHVDE------------------WNKELLLYAGKVALKLGKLDEAESWLKKAIEID 303 >gi|224079309|ref|XP_002189702.1| PREDICTED: similar to zinc finger, MYND-type containing 12 [Taeniopygia guttata] Length = 448 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 13/100 (13%) Query: 212 NQKKKNAKEWNRNRAILLIARSLENAD----KGDMIASYHDAIESLKLCD--------NS 259 + +K+ KE R LIA +L A G + + A+++L+ Sbjct: 37 EKDRKHGKEQLLRRQESLIAVALSTAQGFVWSGQPLEAIPAALQALRFSSRVFGSGSSQL 96 Query: 260 IMASICAAKSLISQNKKRKAEVILEKI-WKVNPHPEIANI 298 + + A++ + R+A L + W V P+ + Sbjct: 97 VPIYLLLAEASTGAGRLRQAAKYLSQAQWIVLQTPDCSAA 136 >gi|291190510|ref|NP_001167125.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar] gi|223648266|gb|ACN10891.1| RNA polymerase-associated protein CTR9 homolog [Salmo salar] Length = 1158 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 99/307 (32%), Gaps = 45/307 (14%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + +L+ L + G+ A + +AL I+ D P + ++ Sbjct: 518 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 577 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAIESLK 254 +EW + K N ++L + D+ A+ K Sbjct: 578 KQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYK 637 Query: 255 -----LCDNSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYT 300 N A ++ A K + + R+A + +W +A+IY Sbjct: 638 QVLRNDSKNLYAANGIGAVLAHKGYYREARDVFAQVREATADISDVWLN-----LAHIYV 692 Query: 301 HLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + LK+ ++ E L+ +++ + G + + + A +A Sbjct: 693 EQKQYISAVQMYENCLKKF-----YKHQNTEVLLYLARALFKCGKLQECKQTLLKARHVA 747 Query: 356 PRKEIFL 362 P + + Sbjct: 748 PSDTVLM 754 >gi|198431345|ref|XP_002124816.1| PREDICTED: similar to MGC78939 protein [Ciona intestinalis] Length = 347 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 20/159 (12%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQRYATKALDISPDA 187 A++ A E +++ T+ R+ N+A R A KAL+I+PD+ Sbjct: 135 AMSNGDNEGAIEHFTAGIKLDNTKTVLFVKRG--TAYLRLAKPNAATRDAKKALEINPDS 192 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + + W+ A +K + + + E K I + Sbjct: 193 AAAYKVLGKADKFLGNWAEACHNFEVAQKIDYDDEIHDLL------KEIKPKATKIREHT 246 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 A E K AA+ + +KA+ EK Sbjct: 247 MARERKKKEKE------IAARI----KRVKKAQKAQEKA 275 >gi|195115032|ref|XP_002002071.1| GI17182 [Drosophila mojavensis] gi|193912646|gb|EDW11513.1| GI17182 [Drosophila mojavensis] Length = 598 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 11/191 (5%) Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + NA R I R+ + D E+ KL ++ A+ L Sbjct: 328 FDAILANADADITLRTYAYIRRAALFIQMEEREKGLADFAEAEKLKPDNPDVYHQRAQIL 387 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLL------SENTVGKL-KRALRLEEI 320 + + A V +K ++ P+ IAN+ Y +N++ ++ K + Sbjct: 388 LLLEQIDAALVEFDKAVRLAPNHAIANVQKCYAEYRLALMSGDQNSLERVIKDFELAIKK 447 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN-SHNTDKIL 379 + VE +++++ + QA +AMK AP L+ I + D + Sbjct: 448 FPDCVECYSLMAQVLADQQQFPQAQNFYDMAMKRAPTNPALLVHQAIMMLQWRGDIDAAV 507 Query: 380 YWTQSALHAMP 390 A+ P Sbjct: 508 SLLNRAIEVDP 518 >gi|161503186|ref|YP_001570298.1| tetratricopeptide repeat protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864533|gb|ABX21156.1| hypothetical protein SARI_01254 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 389 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 17/164 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 + + A + +++ R AV L D +A Y A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136 Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQLGNDDM 196 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + NS SI + +++ KA L+++ Sbjct: 197 ERAMALLKKGAAADKNSARVSIMMGRVYMAKGDYAKAVESLQRV 240 >gi|158301431|ref|XP_321122.4| AGAP001939-PA [Anopheles gambiae str. PEST] gi|157012467|gb|EAA01154.4| AGAP001939-PA [Anopheles gambiae str. PEST] Length = 696 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 81/252 (32%), Gaps = 37/252 (14%) Query: 176 YATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI----L 228 A++ + PD ++++ Q K++ A+ L + + Sbjct: 336 LASRLANAHPDLE--FQSLLVRVSQLARDKKYREAVELLEAYAQRLPAGRTTELLQVRFA 393 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI-- 286 ++ L ++ I + E+ + + A + + + K+ A IL+ Sbjct: 394 IVQLQLVAGNRKAAIETLESLGEA-RYQPGVVSALVT---LHLGLDNKQAASEILKSAVE 449 Query: 287 WKVNPHP------EIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 W ++++++ HL K L + ++ +++++ Sbjct: 450 WYKRQKSATISDSDLSDMWRQAASFHLRGGEPETAAKSLEELLRTHPNDMK---LLAQLV 506 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWI 395 + D +A A K P E +++I+ + N W A P Sbjct: 507 IAYAQFDP--KRAQQASKRLPALETLTTVSEIDALEATN------WMMIAKAVKRKPNQP 558 Query: 396 SDDGYLSSVWLP 407 + G + P Sbjct: 559 AGGGRTTGDQSP 570 >gi|149919241|ref|ZP_01907724.1| hypothetical protein PPSIR1_02451 [Plesiocystis pacifica SIR-1] gi|149819955|gb|EDM79377.1| hypothetical protein PPSIR1_02451 [Plesiocystis pacifica SIR-1] Length = 376 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 37/111 (33%), Gaps = 5/111 (4%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNR-----AILLIARSLENADKGDMIASYHDAIE 251 A ++ A ++ + + R A L + R L + G+ + Sbjct: 222 LRREAGDYDGARAAFDRALARMRAGSTPRHQQTLAWLALQRGLVEWETGNPKEALRYYQG 281 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + + + A++ + + +A + + + PE+ + L Sbjct: 282 AHAAFPDWWLVTEHRAEAHAALGEHHEAISLYRQALDHSHQPELMDALAAL 332 >gi|114328818|ref|YP_745975.1| TPR repeat-containing protein [Granulibacter bethesdensis CGDNIH1] gi|114316992|gb|ABI63052.1| tetratricopeptide repeat family protein [Granulibacter bethesdensis CGDNIH1] Length = 598 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 68/198 (34%), Gaps = 8/198 (4%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ +IG+ A+ + LD+SP P + Q + S A L++ K Sbjct: 45 RQAFKIGNAAVAEELSLAVLDLSPYDPDALLMLSQIRLAQNNHSAAKALLSRLVKANPNL 104 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A+ L + + + ++ + A +++ A L + E Sbjct: 105 ----AVQLTQLARLHMEVRELKDAERVARMAIRADPTLADAHNVLGMILSEAGELIGGEA 160 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALE 337 + P+ + + G+ + A + + + ++++ + + + Sbjct: 161 CYRHTIAMIDQPDAIILANLAWNLTLQGRFEEAASSYEQSLSLAPDVPQTVIGHALLERK 220 Query: 338 MGSIDQAHAKAMLAMKIA 355 G +++A A + A Sbjct: 221 AGRLEKARDILSQAYEKA 238 >gi|326798999|ref|YP_004316818.1| hypothetical protein Sph21_1586 [Sphingobacterium sp. 21] gi|326549763|gb|ADZ78148.1| Tetratricopeptide TPR_2 repeat-containing protein [Sphingobacterium sp. 21] Length = 583 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 108/317 (34%), Gaps = 32/317 (10%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 ++L ++I A A+ + + Q E YL + L + A + Sbjct: 25 QSLKDAQVAIDAEQYAKAKSILKNLVQNKPKDAENYFYL--GDVYLVTDYPDSAKTFFQQ 82 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-----APWVTEAVVQQYVL 200 L+ L + G+ A++ T+A + + +V A + + Sbjct: 83 GLEADPKDNLNKVGLGAVALVQGNTAEAEKLFTEATEKAKKKDYLENLYVGRAYMNPNLE 142 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 ++ +A+ +L + KE N+ A++ + GD +Y + ++ L + Sbjct: 143 KPDYKKALPYLEKA----KEANQKDALIPSSLGDAYFGMGDASNAYTNYRDAYDLDNTFT 198 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL------------LSENTV 308 A + +A L I + HP+ A Y L SE+ Sbjct: 199 RARVQMTVISKQARAFPEAVQDLNTI--IQEHPDYAPAYRELAETYNAYAQFATKSEDYN 256 Query: 309 GK----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA---MLAMKIAPRKEIF 361 + LK + ++ S++S + + ++ +A K+ PR + Sbjct: 257 SRIQEALKAYKQYMDLTDYSLDSRMRYADFMIKARDYKNLEEQANEMAKLDKVNPRILRY 316 Query: 362 LLLAQIEQANSHNTDKI 378 L A E N ++ K Sbjct: 317 LGYASYENGNYPSSQKA 333 >gi|325919956|ref|ZP_08181941.1| Tfp pilus assembly protein PilF [Xanthomonas gardneri ATCC 19865] gi|325549572|gb|EGD20441.1| Tfp pilus assembly protein PilF [Xanthomonas gardneri ATCC 19865] Length = 691 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 16/203 (7%) Query: 162 FESCRIGDLNSAQRYATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216 ++ R + A A + A D + W+ A+ QQ + A+ + Sbjct: 6 LQALRRNAADDAVALAREWVISAPDNAATHRWLGLALQQQQGQP---ALALASIETALTL 62 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 ++ + + + + + D S A L N A + A +++ Sbjct: 63 TPEDADLHLLRAGLLLATRDLSAADAALSRTTA-----LDPNQFNAYVMQAHLAVARGDL 117 Query: 277 RKAEVILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A+ + ++ P HP++ + L + L R + + L + Sbjct: 118 DDAQRLSRTAARLAPEHPQLLAVDGVVELRRGQSDHALSLLTRAAQQLPDDPRVLFALGF 177 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 L+ A +++ P Sbjct: 178 AYLQKEHFAFAERAFERVVELNP 200 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 24/192 (12%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + GDL+ AQR + A ++P+ P + VV+ + A++ L + + + Sbjct: 111 AVARGDLDDAQRLSRTAARLAPEHPQLLAVDGVVELRRGQSD--HALSLLTRAAQQLPDD 168 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R +L A K + ++L A+ Q + A Sbjct: 169 PR----VLFALGFAYLQKEHFAFAERAFERVVELNPPGTALRAFIAQLAQRQGRLDDALA 224 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ ++ P +I + +L + L+ + V+ + L + Sbjct: 225 AMQGVF-AQPGGDI----------PAMRRLAGEMELQAGRPDQ-----AVAHLRLALAHW 268 Query: 342 DQAHAKAMLAMK 353 + Sbjct: 269 PADRRTLHALLT 280 >gi|308186996|ref|YP_003931127.1| hypothetical protein Pvag_1488 [Pantoea vagans C9-1] gi|308057506|gb|ADO09678.1| Uncharacterized protein yciM precursor [Pantoea vagans C9-1] Length = 389 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 41/194 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL VQ +A Y+ A + + + T Sbjct: 83 GEVDRAIRIHQALMESASLSYEQ--RLLAVQQLGRDYMAAGLYDRAEDMFKQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 RIG + ++ + +W +AI + Sbjct: 139 F-----------RIG---------------------ALQQLLLIHQATSDWQQAIEVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K KE + A +L+ D+ + + NS SI + L+ Sbjct: 167 LVKLGKEKQKGEIAHFYCELALQAMSSDDLDRAMSLLKKGEAADRNSARISIMMGRILME 226 Query: 273 QNKKRKAEVILEKI 286 + +A L+++ Sbjct: 227 KEDYARAVGHLQRV 240 >gi|300309989|ref|YP_003774081.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gi|300072774|gb|ADJ62173.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 542 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 49/151 (32%), Gaps = 3/151 (1%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A E + L + +A L + G ++ A+ L + + + Q Sbjct: 186 DEAREVYKQALGMRDDLVWAKIGLARCNIVAGQMDDARAIVEDVLAQNKQFIAAYDLLAQ 245 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 A+ L + + R+R + +A + D+ +Y ++ K Sbjct: 246 IDEAQGNQEGALEALTRSSEIIPSARRSRLVGDVAYRSGHLDQA--REAYDKVLKHTKGS 303 Query: 257 DNSIMASICA-AKSLISQNKKRKAEVILEKI 286 + + + A+ I A +LE Sbjct: 304 LTAQPTDLLSLAQVHIDSGDADAALRLLESA 334 >gi|238504042|ref|XP_002383253.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357] gi|220690724|gb|EED47073.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357] Length = 727 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 22/195 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A+ A+ ++ + + ++ + + A + L++ + + Sbjct: 381 ANENSYAKAQDIAMNMLRQNNQDPDALMIRARAFYGLGETEQALKTLKICISLDP----- 435 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 D+ SA + + A AK++ +AI +Q + Sbjct: 436 ------------DMKSAIKLLRTVQKLMRTKEEGNNAF-----KAKDYRKAIDLWSQALE 478 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A +L R+ + + + + D E+L+L + + A AK+ + Sbjct: 479 VDPSNKDMNAKILQNRAQAHINLKEYDNAVKDCTEALRLDPSYVKAQKIRAKAHGAAGNW 538 Query: 277 RKAEVILEKIWKVNP 291 +A + + + NP Sbjct: 539 EEAVRDYKAVAESNP 553 >gi|196232526|ref|ZP_03131378.1| sulfotransferase [Chthoniobacter flavus Ellin428] gi|196223288|gb|EDY17806.1| sulfotransferase [Chthoniobacter flavus Ellin428] Length = 738 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 11/106 (10%) Query: 289 VNPHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +P P+ + + L + T + A L + +++ IAL+ + +A Sbjct: 2 THPTPDPRQRLEAAFEDLRAGRTKEAQQAADGLRRTFPDHAGVRNLLALIALDQQAPQRA 61 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A+++ PR+ I+ N + L A+ + Sbjct: 62 AQHLEHAIRLDPREPIY-------HCNLGEARRALQEMDKAIESFR 100 >gi|21326645|gb|AAL30085.1| NodB-like protein [Xanthomonas campestris pv. campestris] Length = 900 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%) Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 K +R RA L R L+ + + E+LKL + +A+ Q + + Sbjct: 779 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 838 Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A LE K++P + + Y + + K + + + ++ Sbjct: 839 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 896 Query: 334 I 334 + Sbjct: 897 L 897 >gi|296807879|ref|XP_002844278.1| pre-mRNA-splicing factor clf1 [Arthroderma otae CBS 113480] gi|238843761|gb|EEQ33423.1| pre-mRNA-splicing factor clf1 [Arthroderma otae CBS 113480] Length = 678 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 78/242 (32%), Gaps = 24/242 (9%) Query: 134 RQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRI-GDL--------NSAQRYATKALDI 183 ++Y A + L P ++ A+ S Y + GD + + + + Sbjct: 257 KEYERARAIYKFALDRLPRSKSAALQSAYTVFEKQFGDRVGVEDVILSKRRVQYEEQIKE 316 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLENA 237 +P + + + + + R + + + W R + + E Sbjct: 317 NPKNYDLWFDLTRLEETSGDVDRIRETYERAIAQIPPSQEKRHWRRYIYLWIFYAVWEEM 376 Query: 238 DKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D+ + E LKL + A+ I Q A L + + P Sbjct: 377 ENQDIERARQIYTECLKLIPHKKFTFAKIWLMKAQFEIRQLDLVLARKTLGQAIGMCPKD 436 Query: 294 EIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++ Y + E + + + E N ES + +++ + +++A A L Sbjct: 437 KLFRGYIDIERKLFEFSRCR-TLFEKQIEWNPSQSESWIKFAELERGLDDVERARAIYEL 495 Query: 351 AM 352 + Sbjct: 496 GI 497 >gi|218779986|ref|YP_002431304.1| response regulator receiver protein [Desulfatibacillum alkenivorans AK-01] gi|218761370|gb|ACL03836.1| Response regulator receiver domain protein (CheY-like) [Desulfatibacillum alkenivorans AK-01] Length = 383 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 64/228 (28%), Gaps = 43/228 (18%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A + + F+ L + D +A ++ +A+ ISP Sbjct: 182 NNNLDDAEKCFLAAINRNKLDVFSFNQLGELYMQRQDFENAAKFLDEAMKISPRQLDRGI 241 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + +A ++ ++E N R Sbjct: 242 RLGTVLLQTGMRDKARQTFDKTISVSREQNETRE-------------------------- 275 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN---IYTHLLSENTV 308 + R A +L +I + P P++ ++ L +N Sbjct: 276 ------------MIVDICEKEGDIRYAANLLIEILQNTPGRPDLLVRLGLFLEELGDN-Q 322 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +KR +++ + + +++ L M A +K P Sbjct: 323 EAVKRLTLASDLDAKDPRIKMHLARNYLAMKRPMWAEKYLNQVLKADP 370 >gi|119496787|ref|XP_001265167.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4), putative [Neosartorya fischeri NRRL 181] gi|119413329|gb|EAW23270.1| RNA polymerase III transcription factor TFIIIC subunit (Tfc4), putative [Neosartorya fischeri NRRL 181] Length = 1098 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 18/159 (11%) Query: 160 LYFESCRI---GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L+ E+ GD +A +A+ I+P+ + + ++ + +A+T L Sbjct: 165 LHSEATSAFIDGDYETAIDLVKRAIHINPEMFAAHSLLSEIFLAQGQKDKALTALF---- 220 Query: 217 NAKEWNRNRAILLIARSLENADKG--DMIASYHDAIESLKLCDNSIMASICA----AKSL 270 + A + + D+ D A+ +D I L + + A A Sbjct: 221 SGAHTRPRDASVWFKVAQMILDRAGDDRPAALNDVIYCLSRVIDIEPKNYNARFQRAAVY 280 Query: 271 ISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304 +A E+I K PH +A Y L Sbjct: 281 RELGHNGRAVTEYERILKEVPHHPRALRNLAEAYIDLNE 319 >gi|118580646|ref|YP_901896.1| hypothetical protein Ppro_2231 [Pelobacter propionicus DSM 2379] gi|118503356|gb|ABK99838.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM 2379] Length = 265 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 56/200 (28%), Gaps = 12/200 (6%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL 143 G+ L L +I A + + L L + Q+ A Sbjct: 42 GFFYLGDAL--AEDGHIDKAIVAYREGLAIAPDDTDALTTL--GDLLFESGQHEAAIASY 97 Query: 144 EMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + ++ L + S GD A +AL+ P + A+ Sbjct: 98 TRVRELEPGDMDVLVSIGLVYSSLDRGDE--AIACFRQALESDPRNVFAWNALGDALYGG 155 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A+ + E + + D ++ + + ++++L M Sbjct: 156 DDVQGAVD----AYRKGVEIDPDDPAAHFNLGELYYDMDELEEAEQECCQAVRLDPCFSM 211 Query: 262 ASICAAKSLISQNKKRKAEV 281 A + + Q + A Sbjct: 212 AYLTLGSICMDQERLEDAVR 231 >gi|111224569|ref|YP_715363.1| hypothetical protein FRAAL5188 [Frankia alni ACN14a] gi|111152101|emb|CAJ63828.1| hypothetical protein; putative TPR domains [Frankia alni ACN14a] Length = 147 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 2/102 (1%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y G+ + + A ++ ++ V + + QY A E Sbjct: 30 YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALGRAQFSAGQYVAARETFA 87 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 ++ T ++A + L + +IGDL +A + A+ + PD Sbjct: 88 WIVDRHPTDDYAQFGLGLSARKIGDLRAAVEHLALAVAMRPD 129 >gi|21240973|ref|NP_640555.1| hypothetical protein XAC0199 [Xanthomonas axonopodis pv. citri str. 306] gi|21106258|gb|AAM35091.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 710 Score = 41.8 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 63/198 (31%), Gaps = 7/198 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ R + A A + + +PD + + + A+ ++ E Sbjct: 26 LQALRRDAADDAVALAREWVTNAPDHAAAHRWLALALQQQGQPALALDSIDTALTLTPE- 84 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A L + R+ D+ A+ + L N A + A +++ +AE Sbjct: 85 ---DADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAER 141 Query: 282 ILEKIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + ++ P HP++ + + L R E + L + L+ Sbjct: 142 LSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQK 201 Query: 339 GSIDQAHAKAMLAMKIAP 356 A +++ P Sbjct: 202 EHFAFAERAFERVIELNP 219 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 86/292 (29%), Gaps = 16/292 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + S + + ++LL LA R + A L + + A Sbjct: 66 GQPALALDSIDTALTLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVM 125 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + GDL+ A+R + A ++P+ P + VV+ + RA++ L + + Sbjct: 126 QAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMR--RGQDDRALSLLTRAAEQ 183 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A +L + K + ++L A+ Q + Sbjct: 184 LPD----DARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLD 239 Query: 278 KAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEEINKESVESLVIVS 332 A ++ + P ++ + L + +L + Sbjct: 240 DALAAMQGV-LDQPDGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALL 298 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLL--LAQIEQANSHNTDKILYWT 382 +G++D A A+ + L LA I W Sbjct: 299 TAWERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWL 350 >gi|255036666|ref|YP_003087287.1| Tetratricopeptide TPR_2 repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254949422|gb|ACT94122.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM 18053] Length = 471 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 31/210 (14%) Query: 167 IGDLNSAQRYATKALDISPDAP-------WVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 GD N A + T + ++PD + ++ RAI Sbjct: 63 TGDFNGAMQAYTTVISMNPDHAPSYFNRGLAKANLKDYRGAMGDYDRAIEL--------- 113 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 N A+ +R + + + D ++ D ++++L A S R A Sbjct: 114 --NPKEALYYQSRGVSKSLQDDYRSAIDDYSKAIELNPEEPKAYYNRGVSYAKLKNHRNA 171 Query: 280 EVILEKIWKVNPHPEIANIYTHLL--------SENTVGKLKRALRLEEINKESVESLVIV 331 V L+ +NP E+A +Y + + R + L + + Sbjct: 172 LVDLDHALSLNPD-ELAALYARGNCKQDLQEYAGSLAD-FTRVIELSPKRTGAYAGRGL- 228 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 LE+G A A A++++P + Sbjct: 229 --AKLELGDYQGAAADFTRAIELSPNDSEY 256 >gi|171915121|ref|ZP_02930591.1| TPR domain protein [Verrucomicrobium spinosum DSM 4136] Length = 1820 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 44/150 (29%), Gaps = 12/150 (8%) Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 Q TR Y + R SA A K P + ++ Sbjct: 81 RAHRERPQDAETRL--HYGYHVLHRRG--PMSAWSLAAKPESCENLTPELHADLIALRAA 136 Query: 201 A----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++++ A + L K E A L ++ + + E+L+L Sbjct: 137 VAALYRDFNVAESLLTSALKLDPES----AWLATEQARFLQAQEKREEALSRLDEALQLR 192 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKI 286 A A+ L N+ +A L + Sbjct: 193 PWFRPAVQHRARLLHLLNRHGEAVAYLTEA 222 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 54/189 (28%), Gaps = 16/189 (8%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G + R + +++PD + + Q + A+ L K N R Sbjct: 1029 QGRNEESLRAFRRTTELNPDWDQAWQDLAQLQEDLGQAEDALHTLRTALKRMPRENNLRM 1088 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNKKRKAEVIL 283 +L ++ G+ + L+ A A L Q + Sbjct: 1089 LL----AIFLWRAGERQEPWELVESCLRDDPGLQRAWGILSAWAPLLHRQQSLEDLARSV 1144 Query: 284 EKIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + HP A ++ L E +L+ I E+ + + E G Sbjct: 1145 TRE-----HPAQARLWMMLARVLRPEAVEERLQAVDHALAIRPRLAEAYDFKAILLSEQG 1199 Query: 340 SIDQAHAKA 348 ++A Sbjct: 1200 KFEEARKAL 1208 >gi|138752634|emb|CAM32314.1| putative cellulose synthase operon protein C [Cronobacter sakazakii] Length = 1167 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 41/159 (25%), Gaps = 9/159 (5%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + L A A + + +L E A L Sbjct: 584 RDSGQEAQAIALLRQQPPSDRIDLTLADWAQQRGDNATARAQYQTVLTRSPASEEARLGL 643 Query: 161 YFESCRIGDLNSAQ----RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QK 214 GD +A+ T A P +P + + +RA Sbjct: 644 AEVLIAQGDNAAAREQLVALQTPAAGGEPRSPDTQRRIANAEAALGDTARAQQAFAVLAA 703 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++ A++L + G + +++ Sbjct: 704 TAKTQPPSQESALVLRDAARFQRQNGQPQQALQTYRDAM 742 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 90/273 (32%), Gaps = 17/273 (6%) Query: 124 LLEVQ--IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL Q AL A +K + + T +AV L + D +A+RY +AL Sbjct: 353 LLIQQGDAALKANNLAQAQQKYQQAATVDNTDSYAVLGLGDVAVAKKDDAAAERYYRQAL 412 Query: 182 DISPDAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL--LIARSLENA 237 + A + + + I L ++ + + L ++ Sbjct: 413 RMDNTNSNAVRGLANLYRRQSPERAEAFIATLPASQRRSIDDIERSMTNDRLEQQAAALE 472 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIA 296 +G + + L L +S+ + A L S ++R A+ ++ ++ + P PE Sbjct: 473 AEGRFADAAAVQRQRLALDPDSVWITYRLANDLASAGQRRDADAVMGQLAQRKPGDPEQV 532 Query: 297 NIYTHLLSENTVGK--LKRALRLEE--INKESVE-SLVI----VSKIALEMGSIDQAHAK 347 Y LS + + L L +E S + + + A + Q Sbjct: 533 YAYGLYLSGSDRQRAALSHLNTLARDKWTPNILELSQRLQTNELMETANRLRDSGQEAQA 592 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 L + P I L LA Q + Sbjct: 593 IALLRQQPPSDRIDLTLADWAQ-QRGDNATARA 624 Score = 37.6 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 46/162 (28%), Gaps = 14/162 (8%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A L L + + GD +A+ L SP Sbjct: 579 TANRLRDSGQEAQAIALLRQQPPSDRIDLT----LADWAQQRGDNATARAQYQTVLTRSP 634 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-----KEWNRNRAILLIARSLENADKG 240 + + + + + + A L + A + + R I +L + + Sbjct: 635 ASEEARLGLAEVLIAQGDNAAAREQLVALQTPAAGGEPRSPDTQRRIANAEAALGDTARA 694 Query: 241 DMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKA 279 + A K S +++ AA+ + ++A Sbjct: 695 QQAFAVLAATA--KTQPPSQESALVLRDAARFQRQNGQPQQA 734 >gi|290511888|ref|ZP_06551256.1| outer membrane autotransporter barrel domain-containing protein [Klebsiella sp. 1_1_55] gi|289775678|gb|EFD83678.1| outer membrane autotransporter barrel domain-containing protein [Klebsiella sp. 1_1_55] Length = 1342 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 98/367 (26%), Gaps = 79/367 (21%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 + + +R +A G ++ + N A++ V Q + + L + IA Sbjct: 253 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 307 Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176 Y A + L + Y ++ + G+++ A Sbjct: 308 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 367 Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 A A L + D P + + + + L + + Sbjct: 368 LAQQSGARGASAKLFRADVLRHNKDLPQAEQTLRSLLSDDPQNAAGRENLYYVLREQNKS 427 Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258 +A+L ++ G+ + E + + Sbjct: 428 AEAQAMLQTLPQNLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPD 487 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 + A+ L +A ++ ++ P +Y L + G ++A L Sbjct: 488 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNNALYAAALFASENGAWQQAQTLL 545 Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359 ++ + ++ L G+ A P+ + Sbjct: 546 ARIPGGSQTSDMRDLRQRVNYNLQLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGK 605 Query: 360 IFLLLAQ 366 + LLA+ Sbjct: 606 LARLLAE 612 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 91/277 (32%), Gaps = 29/277 (10%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188 A ++ E +LQ A+ + + + R GD +A +Y ++A D+ DA Sbjct: 275 SGNTAAAKQQFEEVLQTNPQDADALAGMGYIAQRSGDYQAASQYLSRAADLGGDASATRR 334 Query: 189 -WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 +A+ + + + ++Q + + + L AD Sbjct: 335 QQAADALFYGQLAQAQQAYKQGNISQALALSAPLAQQSGARGASAKLFRADVLRHNKDLP 394 Query: 248 DAIESLK--LCDNSIMASICAAK-----SLISQNKKRKAEVILEK-----IWKVNPH--- 292 A ++L+ L D+ A+ + L QNK +A+ +L+ K+ P Sbjct: 395 QAEQTLRSLLSDDPQNAA---GRENLYYVLREQNKSAEAQAMLQTLPQNLQQKLQPRVVA 451 Query: 293 --PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P A + S N G + + + ++++ + G+ +A + Sbjct: 452 GMPGDAVRRQAQAQVSSGNPAGAIATLREGVARYPDDPWLRLDLARLLQKSGNGSEASSL 511 Query: 348 AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 A + A + + + + Sbjct: 512 MSAAYRPGASNNALYA-AALFASENGAWQQAQTLLAR 547 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 88/266 (33%), Gaps = 43/266 (16%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--A 180 L + LA+ A L M P L GDL +A + Sbjct: 569 QLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGKLARLLAESGDLTTAVSLVRNNIS 628 Query: 181 LDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSL 234 +S +A + AV+ Q L A L + A A + +I + Sbjct: 629 SGVSGNAGDYADQIAVLNQAGLTG---EAQNLLTNPQLQASSTPTQLASIRNGYVINEAD 685 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 ++G+ A+Y I +++ + A+ K K + Sbjct: 686 RLREQGNYAAAYDKLIRAMQSDPQNTDLMFAMARLY-QSGKMNKEAGV------------ 732 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +Y +L++ +T + RA + +AL G+ D+A + ++ Sbjct: 733 ---VYDYLMTRDTPNQDARAGAI---------------DVALSAGNNDRA-EQLAGGLRQ 773 Query: 355 APRKEIFLLLAQIEQANSHNTDKILY 380 + LLLA++ +A H+ + Y Sbjct: 774 DNSPDRLLLLARVAEAQGHHQQAMTY 799 >gi|196228742|ref|ZP_03127608.1| Tetratricopeptide domain protein [Chthoniobacter flavus Ellin428] gi|196227023|gb|EDY21527.1| Tetratricopeptide domain protein [Chthoniobacter flavus Ellin428] Length = 863 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 7/145 (4%) Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 D A+ + ++LK N + A + A I A + K+ +NPH A+ Sbjct: 223 SSDTEAAENALEQTLKFNPNHLPARLLMADQFIDGENYDVAAREIAKVLAINPHLAEAHA 282 Query: 299 Y----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 Y +L ++ + RA L+ + E ++ K + + A A+K Sbjct: 283 YRAVLANLQADPKTEEAARAEALQLW-PTNPEIPHLIGKKLSQKYRFAEGAALQREALKW 341 Query: 355 APR--KEIFLLLAQIEQANSHNTDK 377 P L + + H+ + Sbjct: 342 DPSYLPAKAQLANDLLRLGGHDDEA 366 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 86/282 (30%), Gaps = 55/282 (19%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR----EFAVYSLYFESCRI-G 168 H E LL+ + A +Y A L PA + L +E+ R G Sbjct: 61 HDQPEEDAWPLLQAKALNAVGRYQEARAIL-----DPAIEHSPNSLQLRLLSYETLRRLG 115 Query: 169 DLN-SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 +A++ A + + ++EW+ + R+ Sbjct: 116 ATEEAAKQLAE----------------LDRLGGSREWA--------YRSPGDRVALARSA 151 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKI 286 LLI D ++ L+ + + + + +S++ A I Sbjct: 152 LLIG--------TDPKKVLDVILDPLRKSQPDFRDTYLVSGELALSKSDFALAGRIFGTA 203 Query: 287 WKVN-PHPE----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 K P+ +A Y +E L + + N + + ++++ ++ + Sbjct: 204 VKKFGEDPDIWFGLARAYVSSDTEAAENAL---EQTLKFNPNHLPARLLMADQFIDGENY 260 Query: 342 DQAHAKAMLAMKIAP---RKEIFLLLAQIEQANSHNTDKILY 380 D A + + I P + + QA+ + Sbjct: 261 DVAAREIAKVLAINPHLAEAHAYRAVLANLQADPKTEEAARA 302 >gi|168260077|ref|ZP_02682050.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205350584|gb|EDZ37215.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 389 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 13/162 (8%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAAGLYDR----AEDMFNQLTDETE 138 Query: 190 ----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIA 244 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 139 FRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDMDR 198 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + NS SI + +++ KA L+++ Sbjct: 199 AMALLRKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240 >gi|169764699|ref|XP_001816821.1| DnaJ and TPR domain protein [Aspergillus oryzae RIB40] gi|83764675|dbj|BAE54819.1| unnamed protein product [Aspergillus oryzae] Length = 727 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 22/195 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A+ A+ ++ + + ++ + + A + L++ + + Sbjct: 381 ANENSYAKAQDIAMNMLRQNNQDPDALMIRARAFYGLGETEQALKTLKICISLDP----- 435 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 D+ SA + + A AK++ +AI +Q + Sbjct: 436 ------------DMKSAIKLLRTVQKLMRTKEEGNNAF-----KAKDYRKAIDLWSQALE 478 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A +L R+ + + + + D E+L+L + + A AK+ + Sbjct: 479 VDPSNKDMNAKILQNRAQAHINLKEYDNAVKDCTEALRLDPSYVKAQKIRAKAHGAAGNW 538 Query: 277 RKAEVILEKIWKVNP 291 +A + + + NP Sbjct: 539 EEAVRDYKAVAESNP 553 >gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group] gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa Japonica Group] gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa Japonica Group] gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group] gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group] Length = 1011 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 10/96 (10%) Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDA 249 A + + + WS+AI L+ + NRA L D + Sbjct: 6 AELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALE-- 63 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L + A + K+L + K+ +A + E+ Sbjct: 64 -----LDPALLQAYVLKGKALSALGKREEALAVWEQ 94 >gi|292491513|ref|YP_003526952.1| hypothetical protein Nhal_1414 [Nitrosococcus halophilus Nc4] gi|291580108|gb|ADE14565.1| Tetratricopeptide TPR_2 repeat protein [Nitrosococcus halophilus Nc4] Length = 304 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 14/196 (7%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 N LA K + +Q H L LL+ L ++++++A +KL ++I R Sbjct: 100 GNTELAEKAYRDTLKQKANHAGALEGFGLLQ----LHKKEFDLAKDKLAAAVKIDPKRWR 155 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A L + D +AQ++ AL+I P P + + + LA W A +F + Sbjct: 156 AHNGLGVIADLRKDYVTAQQHYQAALEIKPGLPLLLNNLGYSHYLAGNWKLARSFFEKIL 215 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 AK+ +A + L +G + A +++ S+ L+ + Sbjct: 216 --AKDSRHEKAWANLG--LIYVRQGHHDEA-TSAFQNIMDEPESL---YHIGYILMMEGD 267 Query: 276 KRKAEVILEKIWKVNP 291 R A K +P Sbjct: 268 HRTAANYFRKAISASP 283 >gi|284122500|ref|ZP_06386846.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] gi|283829344|gb|EFC33740.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] Length = 552 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 16/206 (7%) Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L+ E+ R G L+ A+ + L P + + RA+ +++ + Sbjct: 17 LFEEAVNHHRGGRLSQAETCYQQVLTQDPAHADALHLLGLVAYQQGRYDRALDCISKAIQ 76 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + L + + + + ++L L + + A L Q + Sbjct: 77 RDAT----KPLYFYNLGLVHQNLNQLREAERAYRQALALKSDYVEALGNLGNVLREQGEL 132 Query: 277 RKAEVILEKIWKVNP-HPE----IANIYTH-LLSENTVGKLKRALRLEEINKESVESLVI 330 A +++ + P HPE + + +RA+ L N E+ E+ Sbjct: 133 DAACAAYKQVLTIKPDHPEGYNNLGVALKEQGKRDEAKDAYQRAIAL---NPENAEAHCN 189 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP 356 + I E +D+A ++ A+ + P Sbjct: 190 LGAILFEDERLDEAISRFEHAVSLKP 215 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 51/159 (32%), Gaps = 2/159 (1%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+ + + A + + + + E L L + + + + A + +L I Sbjct: 89 GLVHQNLNQLREAERAYRQALALKSDYVEALGNL--GNVLREQGELDAACAAYKQVLTIK 146 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 +L G + A+ +A+ ++P+ + + AI+ Sbjct: 147 PDHPEGYNNLGVALKEQGKRDEAKDAYQRAIALNPENAEAHCNLGAILFEDERLDEAISR 206 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + L +AR + +G + A Sbjct: 207 FEHAVSLKPHYAKAHHHLGLARLWKQDTEGALHELRTSA 245 >gi|225871875|ref|YP_002753329.1| non-specific serine/threonine protein kinase [Acidobacterium capsulatum ATCC 51196] gi|225792350|gb|ACO32440.1| non-specific serine/threonine protein kinase [Acidobacterium capsulatum ATCC 51196] Length = 877 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 98/287 (34%), Gaps = 33/287 (11%) Query: 130 ALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A+ + ++A E+ M P A+ L G A+ +A ++ PD+ Sbjct: 584 YRAQGKQDLALEQFQRAMQLDPR-NADALDGLARVHENAGRFQDAKAEFVRAANLQPDSW 642 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A+ Y ++ +AI + + A +L+ + D+GD AS H Sbjct: 643 DGYNALGMFYDRQGKYPQAIAAYQSARAITPD----NATVLLNLAGAYEDQGDP-ASLHK 697 Query: 249 AIESLKLCDNSIMASICAA---KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS- 304 A L+ A +++ +A L + + N + ++ L Sbjct: 698 AEGLLRRSLALHPTYAGWANLGNLYYLEHRFPEAVDALRRALQFNAANYL--VWDDLRGS 755 Query: 305 ----------ENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++T K K+ + + ++V + + + G AH A+ Sbjct: 756 CEWVKDKACVQSTSEKEKQMLRTYVKNHPHDAVAVVSYADLLAQAGQNSLAHNYIQTALA 815 Query: 354 IAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALH-------AMPDP 392 I+P +A + + + + + Y AL A+ DP Sbjct: 816 ISPDDPSTLEAVAVVYENLGNRKEAVRY-LNQALRKGYSRNQALSDP 861 >gi|229918431|ref|YP_002887077.1| TPR repeat-containing protein [Exiguobacterium sp. AT1b] gi|229469860|gb|ACQ71632.1| TPR repeat-containing protein [Exiguobacterium sp. AT1b] Length = 219 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 13/210 (6%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A+ + ++ A + ++ T ++ I D + A + KA+++ Sbjct: 10 AMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKAIELDGSFGA 69 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A ++ A L Q + + A L L GD + + Sbjct: 70 AHYAKGALAYELEQLESAEASLRQALLSGMD----DADLHFMLGLTYKAMGDFVRAMPRL 125 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLS 304 E+ K + + +L + +A V LE+ ++ H + +A Y L Sbjct: 126 REAKKQSPEDVEITFQYGLALAQSEQLEEAVVALEETLDLDASHTDARYNLAIAYAFLGD 185 Query: 305 -ENTVGKLKRALRLEEINKESVESLVIVSK 333 E T +L+R E+ + + V+K Sbjct: 186 QERTYAELQRV---LEMQPDHELARDAVAK 212 >gi|171915650|ref|ZP_02931120.1| Peptidase C39, bacteriocin processing [Verrucomicrobium spinosum DSM 4136] Length = 1656 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 55/191 (28%), Gaps = 15/191 (7%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA---KEWSRAITFLNQKK 215 + + D + AQ L PD+PW E+ + + + A + + Sbjct: 72 GKAIQKWNLHDYDEAQLLFLDHLTKYPDSPWAAESELHLGCASQYLGRYDEAQKWFEASQ 131 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A L+ + D+G++ + + + A + A I Sbjct: 132 TRADLGQPMHQKALLRLGVVAMDRGELSKASELFAQLRANDGD--PARMTYASYWIRALS 189 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 KA+ E + + I ++ T + RA L+ + ++ Sbjct: 190 LMKAK---ETALRDCGQKSLGEIC-KVMGNETNARELRA--LDAAGPH----GFTIQELE 239 Query: 336 LEMGSIDQAHA 346 A Sbjct: 240 QTARRYGMAAR 250 >gi|167751933|ref|ZP_02424060.1| hypothetical protein ALIPUT_00175 [Alistipes putredinis DSM 17216] gi|167660174|gb|EDS04304.1| hypothetical protein ALIPUT_00175 [Alistipes putredinis DSM 17216] Length = 370 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 NR + + L +++E D GD ++L L + + A + + + +KA Sbjct: 26 NREQVLALQRQAIELMDNGDPDQGIVLLRQALTLDPDYWPLTYEMAYAYMVKRDYQKAIK 85 Query: 282 ILEKIWK 288 + + ++K Sbjct: 86 LAKTLYK 92 >gi|138895365|ref|YP_001125818.1| TPR repeat-containing protein [Geobacillus thermodenitrificans NG80-2] gi|134266878|gb|ABO67073.1| TPR-repeat-containing protein [Geobacillus thermodenitrificans NG80-2] Length = 1386 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 55/184 (29%), Gaps = 10/184 (5%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE 163 + + Q L + L +IA +Y A LQ P E Y+ Sbjct: 546 RAEQALKQAKGKRQSPLYHYLRGRIAFFMSRYEEAVRHFRASLQLDPDQPEVWSYTALAS 605 Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G + A+ + P ++ + + A + + + Sbjct: 606 AYA-GYTERGLVCSRIAVHLHPGDLFIETNHGLLLFHAKRL--AEARKWFD----HLVRR 658 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R A L R+ + + G + + L + A K+ +A+ Sbjct: 659 ERRDAHLWYERARCDLELGHRRKAERGFRVAKALDPREPYPYVMLADLYDDDGKREQAKA 718 Query: 282 ILEK 285 +L++ Sbjct: 719 VLKE 722 >gi|326386010|ref|ZP_08207634.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] gi|326209235|gb|EGD60028.1| TPR repeat-containing protein [Novosphingobium nitrogenifigens DSM 19370] Length = 882 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 42/346 (12%), Positives = 98/346 (28%), Gaps = 60/346 (17%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH---------- 140 G++ + A + E ++ + + + + A Sbjct: 53 GVLQATSGAFAQAETAFRRAADLRPADAE--IHFMLGVTLQQQGKADEAAAAFRRASSLN 110 Query: 141 ------------------------EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + LE ++++ A +L + G + A Sbjct: 111 PQHELALLALGTTLQEIGRTGEALDALERLIRLNPASLDAHNNLGVALIQAGQPDKAAAA 170 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---TFLNQKKKNAKEWNRNRAILLIARS 233 AL + PDAP +V + A+ + A+ L + + A++L+ Sbjct: 171 LETALHLRPDAPDTLYNLVAALLSARRFDAALVRSEQLLRMVPRDPQALMQHALVLVEAG 230 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + + A + A +L++ + +A + ++ + P Sbjct: 231 RGDEALAHLDAMLAQLPQGAAGAPLRAAILGHRAIALMALGRPEQALDVYDEALRAAP-- 288 Query: 294 EIANIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 A+ H L A N + ++ ++ L +G A Sbjct: 289 --ADADIHANRALALLALRRPYDALVSAQMAARHNSAAPQAHNVLGLAHLRLGEYGAAAT 346 Query: 347 KAMLAMKIAPR-----KEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + P + LA++E+ + + W AL Sbjct: 347 AFGQGLALRPDDPDMLSHLATALAELERHDEAD----RLW-ARALT 387 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 17/208 (8%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-----GDMIASYHDAIESLKL 255 +++ AI L ++ + R +A+L S +A ++ A + + Sbjct: 12 SRDQIEAILTLARQGRMGDALPRAQALLAAHPSAFDAAHLVGVLQATSGAFAQAETAFRR 71 Query: 256 CDNSIMASI----CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN---TV 308 + A +L Q K +A + +NP E+A + + T Sbjct: 72 AADLRPADAEIHFMLGVTLQQQGKADEAAAAFRRASSLNPQHELALLALGTTLQEIGRTG 131 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQ 366 L RL +N S+++ + ++ G D+A A A+ + P ++ L+A Sbjct: 132 EALDALERLIRLNPASLDAHNNLGVALIQAGQPDKAAAALETALHLRPDAPDTLYNLVAA 191 Query: 367 IEQANSHNTDKIL-YWTQSALHAMPDPL 393 + A + + + DP Sbjct: 192 LLSARRFDAALVRSEQLLRMV--PRDPQ 217 >gi|322421643|ref|YP_004200866.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320128030|gb|ADW15590.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 598 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 11/169 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G A+ + + P + + A L + + E Sbjct: 20 LRKGMQEEARAQLRELVRQEPPSTAACYLLAVLRGEDGSPEEAAELLARTL--SLEPENV 77 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A+ + +L+ + + E+L++ + A I A L + +AE++L Sbjct: 78 KALNALGAALQQLE--QPEQALSCYREALRIKPGFLEARINLALLLKEALRFSEAELVLR 135 Query: 285 KIWKVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKESVESL 328 HP+ ++ +L + ++ + ++ + +++ Sbjct: 136 DG--TELHPDSVRLHYNLANVLHYQGRSLEAVAAYRETLRLDPDHLDAR 182 >gi|241713562|ref|XP_002412106.1| conserved hypothetical protein [Ixodes scapularis] gi|215505183|gb|EEC14677.1| conserved hypothetical protein [Ixodes scapularis] Length = 778 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 9/127 (7%) Query: 157 VYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LN 212 + L E+ GD A + + + + P AP + + Y + ++A+ F L Sbjct: 11 LQGLMGEANLCFARGDHEDAIKMCMEVIRLVPRAPEPFQTLGMLYEEMGDPAKALQFSLI 70 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + + ++ ++GD+ + +++ +++ + Sbjct: 71 GAHLSPDDADEWARLGELS-----LEQGDVRQATTCYARAVRADPSNLDLRLELCTLYEQ 125 Query: 273 QNKKRKA 279 ++RKA Sbjct: 126 AGEQRKA 132 >gi|195381697|ref|XP_002049582.1| GJ21672 [Drosophila virilis] gi|194144379|gb|EDW60775.1| GJ21672 [Drosophila virilis] Length = 655 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---D 241 P + + + +++ + AI + +L + R+ +G D Sbjct: 364 PTSIEQHKKLGNEHLENGKLLAAIDTYSAALAEYPRGE----VLYLNRATALMRRGWFGD 419 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A+ D E+L+L + A A++L+ ++ ++A+ L++ Sbjct: 420 IYAALRDCHEALRLDPTYVKAHFRLARALLELHRPQEADKCLQE 463 >gi|195160004|ref|XP_002020866.1| GL14152 [Drosophila persimilis] gi|194117816|gb|EDW39859.1| GL14152 [Drosophila persimilis] Length = 586 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 10/151 (6%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + RA + R+ + D + KL +S A+ L+ + A Sbjct: 330 DTIRAYAYMKRASLYMQVNKRDEALADFDAAEKLKPDSPDVYHQRAQILLLLDSINPALE 389 Query: 282 ILEKIWKVNPHPEIA---NIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIV 331 EK ++ P+ IA YT + +++ + + + VE ++ Sbjct: 390 QFEKAVRLAPNHAIAYVQKCYTKYRLALMTNNQQGLESVVRQLEQAIDQFPKCVECYSML 449 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 +++ + + DQA AMK+AP Sbjct: 450 AQVMADQQNFDQAQQYYDKAMKLAPTNAALF 480 >gi|163846279|ref|YP_001634323.1| hypothetical protein Caur_0695 [Chloroflexus aurantiacus J-10-fl] gi|222524035|ref|YP_002568505.1| tetratricopeptide repeat-containing protein [Chloroflexus sp. Y-400-fl] gi|163667568|gb|ABY33934.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus J-10-fl] gi|222447914|gb|ACM52180.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl] Length = 1766 Score = 41.8 bits (97), Expect = 0.28, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 23/183 (12%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 +H N LL + LA+R A E +LQ+ A L G L+ Sbjct: 34 EHHPDNLEAQRLL-GEAYLAKRDLPAATATFEQVLQVDPENIPAHVGLGMAYEWQGRLDK 92 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A +AL+I PD P + +V+ Y A W A L ++R Sbjct: 93 AIAEFEQALEIRPDMPELRAQLVRLYTEA-------------------WGSEHAALRLSR 133 Query: 233 ---SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + A + + H+ + + + + A + ++L + +A + K Sbjct: 134 PGLARLYARGHMLPQAIHEFRQVIAEHPDRLDAWVGLIEALWRDGQLDEAATVCRDALKQ 193 Query: 290 NPH 292 PH Sbjct: 194 QPH 196 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 63/196 (32%), Gaps = 16/196 (8%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + E+ +I A L+ PD + + Y+ ++ A Q + E Sbjct: 16 FLEANQI---EQAIGLIQHILEHHPDNLEAQRLLGEAYLAKRDLPAATATFEQVLQVDPE 72 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + + +G + + + ++L++ + + A Sbjct: 73 ----NIPAHVGLGMAYEWQGRLDKAIAEFEQALEIRPDMPELRAQLVRLYTEAWGSEHAA 128 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + L + P +A +Y + ++ + + +++ V + + G Sbjct: 129 LRLSR-------PGLARLYA--RGHMLPQAIHEFRQVIAEHPDRLDAWVGLIEALWRDGQ 179 Query: 341 IDQAHAKAMLAMKIAP 356 +D+A A+K P Sbjct: 180 LDEAATVCRDALKQQP 195 >gi|330941704|gb|EGH44461.1| TPR repeat-containing protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 446 Score = 41.8 bits (97), Expect = 0.29, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 8/130 (6%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ ++L GD S +E + I + A+ L S N+ ++A +LEK Sbjct: 67 LIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSI 125 Query: 288 KVNPHPE---IANIYTHLLSENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K +P+ + Y +L E + L + + E ++ + LE + D Sbjct: 126 KK--YPDDKRLRLTYARMLVEQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWD 183 Query: 343 QAHAKAMLAM 352 +A + Sbjct: 184 EAAGYLEELI 193 >gi|171910644|ref|ZP_02926114.1| type II/III secretion system protein [Verrucomicrobium spinosum DSM 4136] Length = 816 Score = 41.8 bits (97), Expect = 0.29, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 70/215 (32%), Gaps = 23/215 (10%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P A + A + + K E + A+ +L+ M A Sbjct: 18 PSGSASGIAQRELARREARVQEAQAAMERGDKLFAEGDYEGALNEYKAALDLLPDAPMTA 77 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 S DA + + CD A++ A+ + +A+ +L N P+ L+ Sbjct: 78 SLRDAATA-RYCD----AAVELARERAKNGRYAEAKALLNDALARN--PDHVKAKKLLVE 130 Query: 305 ENTVGKLKRALRLEEINKES------VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357 + + + + E VE + + +G D A A++I Sbjct: 131 LDDPVRYE-----PALTPEHVKNVGEVERHLQMGYSYYNIGDYDAAIRTFQDALRIDKYN 185 Query: 358 --KEIFLLLAQIEQANSHNTDK--ILYWTQSALHA 388 + A+ +++ +T + +A++A Sbjct: 186 GAARRGMERAEQKRSEYFDTARDHQRAKMLNAVNA 220 >gi|170017047|ref|YP_001727966.1| TPR repeat-containing protein [Leuconostoc citreum KM20] gi|169803904|gb|ACA82522.1| TPR repeat protein [Leuconostoc citreum KM20] Length = 420 Score = 41.8 bits (97), Expect = 0.29, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 7/132 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALDI 183 L Q +Q A + L T +Y L + + GD +A+ Y KAL I Sbjct: 245 LLGQSYERLQQPEEAFRVYQAGLIQDETN-TKLYHLAGHAAEKSGDDTAAEAYYQKALSI 303 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + Y+ ++++A++ L ++ K ++ N + I +++ GD Sbjct: 304 DESDTTALFMLADLYLQHNQYAQALSLLEKENKEIEDERFNWYLARIYQAI-----GDDG 358 Query: 244 ASYHDAIESLKL 255 + E+ L Sbjct: 359 KAKQYWQEATPL 370 >gi|85720009|gb|ABC75573.1| hypothetical protein [Ictalurus punctatus] Length = 202 Score = 41.8 bits (97), Expect = 0.29, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 7/158 (4%) Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI 295 +M + + LK C +S+ + ++ + +A ILEK NP PE+ Sbjct: 33 EQSENMDKARDAYNQGLKKCPHSMPLWLLLSRLEERVGQLTRARAILEKSRLKNPQSPEL 92 Query: 296 ANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L + + A L +E S ++ ++ A+ + + Q K++ A+K Sbjct: 93 WLESVRLEYRAGLKNI--ANTLMAKALQECPNSGILWAE-AVFLEARPQRKTKSVDALKK 149 Query: 355 -APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L +A++ + K W + PD Sbjct: 150 CEHDPHVLLAVAKLFWSERK-ITKAREWFLRTVKIEPD 186 >gi|299136529|ref|ZP_07029712.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp. MP5ACTX8] gi|298601044|gb|EFI57199.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp. MP5ACTX8] Length = 540 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 86/282 (30%), Gaps = 43/282 (15%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL + N A + ++V+ + L ++ Q RQ + Sbjct: 265 GLAHFNSANYAAAEQAFAFVATRL-----PLPEVVNDQAVALSRQGKDGAAFFQRASTAD 319 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + E Y+L R GD A + A AL + P+ Sbjct: 320 PSDEDYHYNLAIALFRRGDTAGALKEADAALKLKPNDNEAGS----LRAHLSLVPAGTKL 375 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + R R A + A + D + + A+ A A Sbjct: 376 TDSATNSFSPVERIRRNYSEAGLRQAAFQLDQMRAARMAM--------LPPAQ--QATEY 425 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 + A+ +L + E + S + V Sbjct: 426 TQLGRDYLAQGLLPEA----------------EGE--------FQSALTADPNSAAAHVG 461 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 ++++ G+ +A +A ++KI P +L+LA+++ A++ Sbjct: 462 LAQVREASGNAAEARDEARKSLKIQPSATAYLVLARLDLADN 503 >gi|296230983|ref|XP_002807781.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13-like [Callithrix jacchus] Length = 890 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 85/244 (34%), Gaps = 21/244 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 239 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 298 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 299 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 351 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYT 300 + D +SL+L N +A + + + ++A ++ K ++ + + Y Sbjct: 352 HEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYR 411 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 L + + + +N+ V++L + + GS+ +A +++ P E+ Sbjct: 412 ELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEV 469 Query: 361 FLLL 364 + Sbjct: 470 CQYM 473 >gi|262304955|gb|ACY45070.1| acetylglucosaminyl-transferase [Amblyomma sp. 'Amb2'] Length = 287 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 6/168 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + H + L L I + A L++ A +L Sbjct: 39 AEDCYQTALRLCPTHADSLNNL--ANIKREQGFVEEATRLYLKALEVFPEFAAAHSNLAS 96 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + G L A + +A+ ISP + + A+ ++ + + Sbjct: 97 VLQQQGKLTEALLHYREAIRISPTFADAYSNMGNTLKEMGDVQGALQCYSRAIQINPAF- 155 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + D G++ + +LKL A A L Sbjct: 156 ---ADAHSNLASIHKDSGNIPEAIASYRTALKLKPEFPDAYCNLAHCL 200 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 11/160 (6%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 AL + P + A + + E+ A + Sbjct: 44 QTALRLCPTHADSLNNLANIKREQGFVEEATRLYLKALEVFPEF----AAAHSNLASVLQ 99 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----H 292 +G + + E++++ A +L + A + ++NP H Sbjct: 100 QQGKLTEALLHYREAIRISPTFADAYSNMGNTLKEMGDVQGALQCYSRAIQINPAFADAH 159 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A+I H S N + ++ E ++ ++ Sbjct: 160 SNLASI--HKDSGNIPEAIASYRTALKLKPEFPDAYCNLA 197 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+D+ P+ P + + + A + A L + Sbjct: 10 RRAIDLQPNFPDAYCNLANALKEKSQVTEAEDCYQTALRLCPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + + +++L++ A A L Q K +A + + +++P A+ Sbjct: 66 EQGFVEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLTEALLHYREAIRISPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + + G L+ R +IN ++ ++ I + G+I +A A A+ Sbjct: 124 AYSNMGNTLKEMGDVQGALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL 183 Query: 353 KIAP 356 K+ P Sbjct: 184 KLKP 187 >gi|253702402|ref|YP_003023591.1| hypothetical protein GM21_3814 [Geobacter sp. M21] gi|251777252|gb|ACT19833.1| TPR repeat-containing protein [Geobacter sp. M21] Length = 615 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 98/307 (31%), Gaps = 25/307 (8%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAA---HNIPLARKMHSYVSQQHTFHNEYLVYL 124 P L + A+ ++ + A K + N YL L Sbjct: 313 DPQRAAAALREHLARFPKHAVAHNDLAAISYQLGEKEQALKHYREAVWLDPKENVYLKNL 372 Query: 125 LEVQIALAE-RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 I E + + A +L+ + +L +G A+ + +AL+I Sbjct: 373 --ADILFVEAGEADEAIAIYLRLLEQSPRDVETLLNLGIICESVGQPAEAESFYQRALEI 430 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P W A Q L + + + A + A RS E +GD+ Sbjct: 431 EP---WNQAARQQLTALRQR-------TEEPQPPAAKDEDLAAEDRYQRSQELVSQGDLD 480 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298 ++ + E L + A A Q K +A EK ++ P +A+ Sbjct: 481 GAFQELKEILLSYPDFAPAHNDLAVLAYQQGDKEQARAHYEKAAELAPGNGTFQKNLADF 540 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-- 356 Y + + G + L +++E+L+ + KI + +A + + + P Sbjct: 541 YF-VEGYDVDGAIAIYLEQLRREPKNIETLMGLGKICTILDRPVEAQSFYGKVINLEPWN 599 Query: 357 -RKEIFL 362 L Sbjct: 600 RDARECL 606 >gi|182681839|ref|YP_001829999.1| TPR repeat-containing protein [Xylella fastidiosa M23] gi|182631949|gb|ACB92725.1| Tetratricopeptide TPR_2 repeat protein [Xylella fastidiosa M23] gi|307578088|gb|ADN62057.1| hypothetical protein XFLM_00135 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 690 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 65/214 (30%), Gaps = 20/214 (9%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA---------------LA 132 L + A A++ + QQ+ H L LA Sbjct: 20 LARAWCASAPGEAQ-AQRWLAAALQQYGEHKAALTASEAALALAPELPELHLQHGLLLLA 78 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A L ++ + + G L+ A++ + A I D P + Sbjct: 79 QHDLSGADAALSRSTRLDPNQFNTYVMQAHLAIARGALDEAEQLSRTAARIISDHPQLLA 138 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + +A+ L+Q + E +L + KG + + Sbjct: 139 VNATITLHRGQVDQALAMLSQAVELLPE----EPAVLFSLGFAYLQKGHIAFAERAFQRV 194 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++L + I A+ Q + A ILE+ Sbjct: 195 IELNPHVIPVRALIAQLAQRQGRLDDALRILEEA 228 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 101/301 (33%), Gaps = 34/301 (11%) Query: 92 LMSIAA----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L+++ A H + + + E V L + A + ++ Sbjct: 136 LLAVNATITLHRGQVDQALAMLSQAVELLPEEPAVLFSLGFAYLQKGHIAFAERAFQRVI 195 Query: 148 QIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALDI-SPDAPWVTEAVVQQYVLAKEWS 205 ++ V +L + + R G L+ A R +AL + D P + + ++A Sbjct: 196 ELNP-HVIPVRALIAQLAQRQGRLDDALRILEEALSLPEGDTPALHRLTGEFELMAGNPD 254 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 RA+ L Q E R LL A + D D + A++ K + Sbjct: 255 RALPHLRQVLATWPEDPRTLEALLTAWKQLDMDD-DARVTLDAALDIKKRNHDL-----W 308 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN--KE 323 A+ ++ +A +++E+ + + E+ L ++ + Sbjct: 309 LARLSVAPVGSDEARIVIER-------------WLSAMPEHLPA----LETLMSLHDIQN 351 Query: 324 SVESLVIVSK--IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + E+ V++ +A+E G + ++ P + L IE H + W Sbjct: 352 NPEAAETVARQIVAIEPGRLSGEQRIVEALLQRDPPAAVACLQQLIESVPEHERTILRPW 411 Query: 382 T 382 Sbjct: 412 L 412 >gi|171316042|ref|ZP_02905269.1| serine/threonine protein kinase [Burkholderia ambifaria MEX-5] gi|171098846|gb|EDT43638.1| serine/threonine protein kinase [Burkholderia ambifaria MEX-5] Length = 1349 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 6/162 (3%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAV 157 +AR+ + + L + + A +L++ R Sbjct: 1164 AMAREAVYCATCLDHLPTLGVTMLYLARTYQLAGDRDAARSLSAALLRLSEAHRLRAVGH 1223 Query: 158 YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y+ + D + A + + + + ++ A+ + Q Sbjct: 1224 YAAIIHAWAQEDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAGRGDYDAALAQIRQCL 1283 Query: 216 K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 R L+ + E + D A+++ + Sbjct: 1284 AWCESTGERYYEAQLLLKQCEYLRRADPRCGGVAALDACRRA 1325 >gi|94969422|ref|YP_591470.1| TPR repeat-containing serine/threonin protein kinase [Candidatus Koribacter versatilis Ellin345] gi|94551472|gb|ABF41396.1| serine/threonine protein kinase with TPR repeats [Candidatus Koribacter versatilis Ellin345] Length = 736 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 14/206 (6%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-LAKEWSRA---ITFLNQKKKNAKEW 221 R + A++ +A+ I P V L W + + + A E Sbjct: 470 RRKSFDYARQMFARAIVIDPTYARAYAGVSDCCSHLYMYWGGSADDLKEAEAASRKAVEL 529 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A ++R L + + ++ L A A+ + KA Sbjct: 530 DPELAEGHVSRGLALQMVKKYEEAEAEFGKATDLNPKLFEAYYFFARLCFQRGNLEKAAD 589 Query: 282 ILEKIWKVNP----HPE-IANIYTHLLSE-----NTVGKLKRALRLEEINKESVESLVIV 331 + E+ NP P +A L +K R E++ E +L + Sbjct: 590 LFERARLANPEDYQTPILLAQTLESLERHLEAKAARARAMKLFERHVELHPEDARALYLG 649 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + ++ +D+A A+ I P Sbjct: 650 ASGLIDAKQMDRALDWTNRALSIDPD 675 Score = 37.2 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 52/194 (26%), Gaps = 5/194 (2%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 K S++ + L ++ ++Y A + + Sbjct: 510 GGSADDLKEAEAASRKAVELDPELAEGHVSRGLALQMVKKYEEAEAEFGKATDLNPKLFE 569 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLN 212 A Y + G+L A +A +P P + ++ E A Sbjct: 570 AYYFFARLCFQRGNLEKAADLFERARLANPEDYQTPILLAQTLESLERHLEAKAARARAM 629 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + E + A L + D M + +L + + A S Sbjct: 630 KLFERHVELHPEDARALYLGASGLIDAKQMDRALDWTNRALSIDPDDPAVLYNVACSYAK 689 Query: 273 QNKKRKAEVILEKI 286 KA +EK Sbjct: 690 LAMSEKAMDCIEKA 703 >gi|301058162|ref|ZP_07199214.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] gi|300447794|gb|EFK11507.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2] Length = 482 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 18/223 (8%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + + A + E LQ+ A ++ G++ A ++ A+ I P + Sbjct: 269 QRRGKLDEALLQYEKALQLRPNFAVAHDNMGLIFMAKGNIPEAVKHTGMAVRIRPGNAII 328 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 Q + A Q + + +A + +L K + + Sbjct: 329 QNNYGQLLLRQGRIEEAAKHFYQAVRIKPRY--AKAQNNLGIALAQQKKLK--EAKEHLL 384 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK 310 + +L N+ + + Q ++A E + +P A T+L + Sbjct: 385 LAARLDPNNPEILNNVGQVFMLQGNSKEAVRYFEAT--IQQNPNFAQALTNL----GFMR 438 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 LK + + + V+ + +A LA+K Sbjct: 439 LK--ENRMDEAAQYFHRALAVA------PDMGRARQGLNLAIK 473 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 43/112 (38%), Gaps = 1/112 (0%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++A K H ++ + +N ++ + Q+ + + A E +Q Sbjct: 368 IALAQQKKLKEAKEHLLLAARLDPNNPEILNNV-GQVFMLQGNSKEAVRYFEATIQQNPN 426 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 A+ +L F + ++ A +Y +AL ++PD + + W Sbjct: 427 FAQALTNLGFMRLKENRMDEAAQYFHRALAVAPDMGRARQGLNLAIKAKGSW 478 >gi|254804737|ref|YP_003082958.1| hypothetical protein NMO_0749 [Neisseria meningitidis alpha14] gi|254668279|emb|CBA05178.1| conserved hypothetical protein [Neisseria meningitidis alpha14] gi|325132285|gb|EGC54978.1| tetratricopeptide repeat protein [Neisseria meningitidis M6190] gi|325135920|gb|EGC58530.1| tetratricopeptide repeat protein [Neisseria meningitidis M0579] Length = 612 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +LK + + A Q +++ KA L+++ K Sbjct: 183 QDGLAQKASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + + A ++ + A + A+ + Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 356 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 357 YTKVRQWLKK-VSAP 370 >gi|15896690|ref|NP_350039.1| TPR repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|15026540|gb|AAK81379.1|AE007842_7 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824] gi|325510854|gb|ADZ22490.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018] Length = 305 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 4/125 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E + L I E A Y L D A + KA+ I+P+ Sbjct: 56 GKVEKAEEYYKEALSIDDYEERAYYGLATIYDEKEDYEEAIKLYNKAIYINPNYHKAYFF 115 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + Y L+ + + AI K + + + + L ++ +Y ++L Sbjct: 116 LANAYDLSGQKNLAIETYE-KLLSLDDMDFWSNLNL---GCIYEEQNKNDLAYRLFSKAL 171 Query: 254 KLCDN 258 K+ N Sbjct: 172 KINPN 176 >gi|134293931|ref|YP_001117667.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4] gi|134137088|gb|ABO58202.1| TPR repeat-containing protein [Burkholderia vietnamiensis G4] Length = 1189 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 25/213 (11%), Positives = 62/213 (29%), Gaps = 11/213 (5%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + T A+ + ++G + A +AL + P Sbjct: 687 DPERALTDFNAAIATKPTFVDALVNSAIALEQLGRHDEALLRCDRALALEPRHACALATR 746 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + AI + + + ++L + ++ +L+ Sbjct: 747 GNAASQLGRHTDAIDSYARAL----DADPLSTVVLCNFADALMRVDRHADAHALCERALE 802 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-----NIYTHLLSENTVG 309 L A A+ + ++ A L + + P ++A + L + Sbjct: 803 LDPQCAPAWFTRARVRLETHRYDDALDDLSRAIALAPLDKLAHFHRGHALRALRRHD--D 860 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSID 342 L R+ +I+ + + + + L G + Sbjct: 861 ALHAYARVLDIDPDDAAAHCTRAFLCLSTGDFE 893 >gi|182677316|ref|YP_001831462.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 301 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 11/174 (6%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P + + Y ++S AI+ +Q K + N A R+L Sbjct: 81 NPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIK----LDPNNAPAYTNRALAYRQSNRND 136 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---- 299 A+ D ++++ A + A L Q +A+ L++ K+N PE A + Sbjct: 137 AALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLN--PENAQAFHARG 194 Query: 300 -THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + N + + + + + + + G D+A A+ Sbjct: 195 LIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDFNAAL 248 >gi|88603325|ref|YP_503503.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] gi|88188787|gb|ABD41784.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1] Length = 314 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 47/163 (28%), Gaps = 8/163 (4%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 L ++ A + +LQ L G+ A + L PD W Sbjct: 72 LLNGSFSEATRAFDQVLQADPDSSPGWLGLARAQSGAGEQEQALISLEEFLFRHPD-EW- 129 Query: 191 TEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++Q +++ A+ + E N A+ G + Sbjct: 130 QGYLLQGTIQTSLQKYPDAVASYEKAL----ELNTTDALAWAGYGAALYGTGSYEDARDA 185 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +SL L + A KSL + A L ++P Sbjct: 186 CQQSLSLRPDLPSAHYWEGKSLFMLGDETGALSSLNHTVSIDP 228 >gi|21115529|gb|AAM43455.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575954|gb|AAY51364.1| polysaccharide deacetylase [Xanthomonas campestris pv. campestris str. 8004] Length = 952 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 7/121 (5%) Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 K +R RA L R L+ + + E+LKL + +A+ Q + + Sbjct: 831 KSSDRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRPDFALAANNLGFVYYRQERYAE 890 Query: 279 AEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 A LE K++P + + Y + + K + + + ++ Sbjct: 891 AARWLENTLKIDPSRAVAYLNLGDAYAKA-GDREKAR-KAYTTYLALQPQGAGAEQARAQ 948 Query: 334 I 334 + Sbjct: 949 L 949 >gi|71279913|ref|YP_267075.1| TPR domain-containing protein [Colwellia psychrerythraea 34H] gi|71145653|gb|AAZ26126.1| TPR domain protein [Colwellia psychrerythraea 34H] Length = 914 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 12/117 (10%), Positives = 44/117 (37%), Gaps = 2/117 (1%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 E + A + +++ A +L + +++ A +A KAL+++P + Sbjct: 779 LENDSDKAIAVYDDVVKKQPKNVVAHNNLAWLYLEQDNISKALEHAEKALELAPQIANIV 838 Query: 192 EAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + + + A+ + ++ K+ + + + ++ + + Sbjct: 839 DTYAKVLLGSGDKRAALQYASKASEIAKGKDVDIQLNYVEALIANNRINEAKDLLAK 895 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 13/119 (10%) Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-- 304 + +++KL I A + A S + + KA I EK W+ +P+ A+ + L S Sbjct: 420 ENLQDAVKLNPELIEAELAIAFSALQRGDIAKANAIAEK-WQKQ-YPDKASSFNLLASIA 477 Query: 305 ------ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + LK++L LE+ ++ +L +IA + +I + +A + IAP Sbjct: 478 IKEGKYDKAEQALKKSLSLEQ---DNFFALTEQLRIARKQENIPLSKQRADYLITIAPT 533 >gi|169779858|ref|XP_001824393.1| DnaJ and TPR domain protein [Aspergillus oryzae RIB40] gi|83773133|dbj|BAE63260.1| unnamed protein product [Aspergillus oryzae] Length = 523 Score = 41.5 bits (96), Expect = 0.29, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 7/164 (4%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174 + L L+ + LA A + + T V +G + A Sbjct: 30 DTPLSSLIASAKTHLAGGSPRDALLYFDAAVSRDPTNYITVFQRG--AAYLSLGKNSQAS 87 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNR-NRAILLIAR 232 + L + PD + +W A+ L + KK++ E+N A A Sbjct: 88 DDFDRVLQLKPDFESALLQRARLRANTADWEGALKDLEKAGKKSSLEYNEIQEARDAAAL 147 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + GD A + A ++ S+ A + Sbjct: 148 AQNAEKHGDWEACVNQANVAVLKASASLSLRQTRAHCRFERGDV 191 >gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii] Length = 484 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 67/175 (38%), Gaps = 15/175 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD----ISPDA 187 + A + L+ M+++ E Y L E C+ G + A + K ++ + P + Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQS 363 Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P +++ + S+A T + Q K L ++ +G Sbjct: 364 TLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 419 Query: 243 IASYHDAIESLKLCDNSIMASI-CAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +++ L+ +S ++ +S + +N+ A+ L+ + + + P+ A Sbjct: 420 DSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 474 >gi|26248913|ref|NP_754953.1| hypothetical protein c3071 [Escherichia coli CFT073] gi|26109319|gb|AAN81521.1|AE016764_203 Hypothetical protein yphG [Escherichia coli CFT073] Length = 1124 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|29826476|ref|NP_828782.1| hypothetical protein SAP1p33 [Streptomyces avermitilis MA-4680] gi|29611274|dbj|BAC75317.1| conserved hypothetical protein [Streptomyces avermitilis MA-4680] Length = 1000 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 32/125 (25%), Gaps = 8/125 (6%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A + A + + + + + L L Q+ A T Sbjct: 843 GAGDREGAEALFRQAADR--GNTDVLCRL--AQVREGAGDREGAEALFRQAADRGNTDV- 897 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +Y L GD A+ A +A D V + Q A + A Q Sbjct: 898 -LYRLAEMREEAGDREGAEALARQAAD--RGNTDVLCRLAQVREEAGDREGAEALFRQAA 954 Query: 216 KNAKE 220 Sbjct: 955 DRGST 959 Score = 39.9 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 92/293 (31%), Gaps = 23/293 (7%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A + A + + + + + L L + + A L T Sbjct: 684 AGDREGAEALARQAADR--GNTDVLCRL--ADMRERDGDREGAEAVLRQAADRGNTDV-- 737 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +Y L R GD A+ +A D T A+ + ++ W A + Sbjct: 738 LYRLADMRERDGDREGAEALFRQAADRG-----STTALFRLAMM---WEGAGDREGAEAV 789 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + +R +L + + GD + A ++ + + +C + Sbjct: 790 LRQAADRGNTHVLYRLADMREEAGDREGAEALARQAADRGNTDV---LCRLAQVREGAGD 846 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI--VSKI 334 R+ L + + ++ + E + + A L + + V+ ++++ Sbjct: 847 REGAEALFRQAADRGNTDVLCRLAQVR-EGAGDR-EGAEALFRQAADRGNTDVLYRLAEM 904 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 E G + A A A A + L AQ+ + + + + + A Sbjct: 905 REEAGDREGAEALARQAADRGNTDVLCRL-AQV-REEAGDREGAEALFRQAAD 955 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 73/285 (25%), Gaps = 20/285 (7%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A L H L L + A L +T Sbjct: 584 AAEGRHRLQWAHHLRHRAATHGSTTALFRL--AMMRERAGDREGAEALLRQAADRGST-- 639 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A+ L R GD A+ A +A D + A + A Q Sbjct: 640 TALSGLADMRERAGDREGAEALARQAAD--RGNTDALYRLADMRERAGDREGAEALARQA 697 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 +R +L + GD + ++ + + A Sbjct: 698 ------ADRGNTDVLCRLADMRERDGDREGAEAVLRQAADRGNTDV--LYRLADMRERDG 749 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI--VS 332 + AE + + + ++ E + + A + + + V+ ++ Sbjct: 750 DREGAEALFRQAADRGSTTALFR--LAMMWEGAGDR-EGAEAVLRQAADRGNTHVLYRLA 806 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + E G + A A A A + L AQ+ + Sbjct: 807 DMREEAGDREGAEALARQAADRGNTDVLCRL-AQVREGAGDREGA 850 >gi|324504302|gb|ADY41858.1| DnaJ subfamily C member 3 [Ascaris suum] Length = 503 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 21/171 (12%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + GDL A+ AL P V E + + + A L+ + + Sbjct: 122 LKQGDLTKAEADYKAALKADPSNGEVAEKLKAIEQIRQFTRDADGLLHSRDYTGAAYYYT 181 Query: 225 RAI--------LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +AI L R+ G++ + D KL +S A + +K Sbjct: 182 KAIEYCQWDARLHENRAKCYEHTGEVQKAIADYRSVSKLVPDSTEAFLTISKLYYGIGDA 241 Query: 277 RKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 ++ + + K+NP H E Y KR +L ++ + E Sbjct: 242 EESLSQIRECLKLNPDHKECFAFY------------KRVKKLVKMRESLSE 280 >gi|319410233|emb|CBY90573.1| conserved hypothetical TPR-containing periplasmic protein [Neisseria meningitidis WUE 2594] Length = 612 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 103/309 (33%), Gaps = 51/309 (16%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + VL + ++ + L + A E R LL+A++ D Sbjct: 129 EPIPGEAQKRAGWLRNVLRERGNQHLDGLEEVLAQADEGQNRRVFLLLAQAAVQQDGLAQ 188 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------------- 288 AS +LK + + A Q +++ KA L+++ K Sbjct: 189 KASKAVRRAALKY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILPPTLMTL 246 Query: 289 ---VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEINKESVE 326 +PEI + + +++ ++ +L R L E N + Sbjct: 247 RLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLERNPNAD- 305 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHNTDKILY 380 + + A+ + + + + A ++ + A + A+ + K+ Sbjct: 306 ---LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRDYTKVRQ 362 Query: 381 WTQSALHAM 389 W + + A Sbjct: 363 WLKK-VSAP 370 >gi|294670789|ref|ZP_06735645.1| hypothetical protein NEIELOOT_02492 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307276|gb|EFE48519.1| hypothetical protein NEIELOOT_02492 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 330 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL ++AL + +A ML E A + + +G A+ + + + Sbjct: 73 LLGAELALHKGDPGLALATYMAMLDRTRDSEVAERA-MDMAVNLGAYEYAEAVYQRWIKL 131 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P W+ + V E+ A + + A E R+R LL+A+ Sbjct: 132 EPTPGPALKRISWMRDMV------RGEYGDARNGFDAALEGANEEQRSRIFLLVAQ---- 181 Query: 237 ADKGDMIASYHDAIESLKLCDNSI--MASICAAKSLISQNKKRKAEVI 282 + + K + ++ A L + N + A+ + Sbjct: 182 IAAQNPAVAQLMDDTVHKRAKSYPELPEAVIADAILSALND-KAADSV 228 >gi|187736127|ref|YP_001878239.1| type II and III secretion system protein [Akkermansia muciniphila ATCC BAA-835] gi|187426179|gb|ACD05458.1| type II and III secretion system protein [Akkermansia muciniphila ATCC BAA-835] Length = 833 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 22/193 (11%) Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD--------------NSIMASIC 265 E ++LL+ ++ + +G + + SL + AS+ Sbjct: 38 EEQAQASMLLLGQARQQYSEGKYQEALDNYRRSLTALPKSPNMEKRRRFLETSIADASVA 97 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 A+ I + +A +LE K P +A + ++ L + ++V Sbjct: 98 VAQEYIKAGRYDEAVKLLEDALKSTPDHALARRTLEI----ARDPVRTNPALSPEHVKNV 153 Query: 326 E--SLVI-VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYW 381 E + ++ ++ E+G D A + +K P + + +A + Sbjct: 154 EEVNRLLHLAFGYYELGQYDAALKEFTSVLKTDPYNTAARRGMELVNRARTAYFSAARDE 213 Query: 382 TQSALHAMPDPLW 394 T+S+ A W Sbjct: 214 TRSSALADVSRQW 226 >gi|108757835|ref|YP_634543.1| TPR repeat-containing protein [Myxococcus xanthus DK 1622] gi|108461715|gb|ABF86900.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622] Length = 3182 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 9/186 (4%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAV 157 +A K + H L L + + R A + + PA A Sbjct: 373 QVAVKALHELLGLKPDHLPSLKAL--ARASDQARDRAGAVRAYRRLAALARDPAEAADAH 430 Query: 158 YSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + D+ A+ + AL ++PD P + + E RA+ L++ ++ Sbjct: 431 VHLARLCAQTEDDIAGARLHCEAALRLAPDHPDALLLLGELCHRGGEHLRALKALDRLRE 490 Query: 217 NAKEWNRNRAILLI-ARSLENADKG--DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 A + + + D+G + E++ L AA+ Sbjct: 491 VAMGRHELDRVGHADLMAGRVWDEGLKQPENALLRFREAVSLLPGEPEPLFAAARVAEGL 550 Query: 274 NKKRKA 279 + ++A Sbjct: 551 GRLQEA 556 >gi|115481532|ref|NP_001064359.1| Os10g0328700 [Oryza sativa Japonica Group] gi|20303634|gb|AAM19061.1|AC099774_23 putative crooked neck protein [Oryza sativa Japonica Group] gi|31431188|gb|AAP53003.1| Crooked neck protein, putative, expressed [Oryza sativa Japonica Group] gi|113638968|dbj|BAF26273.1| Os10g0328700 [Oryza sativa Japonica Group] gi|215687247|dbj|BAG91812.1| unnamed protein product [Oryza sativa Japonica Group] Length = 711 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 87/278 (31%), Gaps = 34/278 (12%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMML--QIPATREFAVY-SLY 161 H+ N+ LL E + + A + L + P R + L Sbjct: 250 HAGSLLAAAGDNDDTAVLLAAFADFEERCGEPDRARAIYQHALRGEPPEPRAEELREKLL 309 Query: 162 FESCRIGDL--------NSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFL 211 R GD + +A+ +P W +++ + +R Sbjct: 310 SLEKRFGDRHGVEDSIVTKRRSQYERAVTTNPLCYDAWFDLIRLEESANTGDANRIRDLY 369 Query: 212 NQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----N 258 + + W R + + E D D+ + E L+ + Sbjct: 370 RRAVANVPPAAAAAEKRHWRRYIYLWINYALFEELDAEDVARARGVYRECLRTIPHKKFS 429 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 + AA+ I A +L V P P+++ Y + E +G + R L Sbjct: 430 FSNICVMAAELEIRDKNLAAARRLLGNAIGVAPRPKLSRRYIEI--ELQLGNVGRCRILS 487 Query: 319 EINKESV--ESLVIVSKIALE--MGSIDQAHAKAMLAM 352 + E S V S ALE +G D+A + LA+ Sbjct: 488 QKFIEHAPSSSHVWRSYAALEKKLGETDRARSVYDLAV 525 >gi|190576474|ref|YP_001974319.1| putative polysaccharide deacetylase family protein [Stenotrophomonas maltophilia K279a] gi|190014396|emb|CAQ48044.1| putative polysaccharide deacetylase family protein [Stenotrophomonas maltophilia K279a] Length = 890 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 2/86 (2%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +R RA R L+ + + E+LKL + A+ Q + Sbjct: 767 AGPASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRPDFAQAANNLGFVYYRQQRY 826 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL 302 +A LE K++P A Y +L Sbjct: 827 AEAARWLENTLKIDPSR--AVAYLNL 850 >gi|218780012|ref|YP_002431330.1| hypothetical protein Dalk_2169 [Desulfatibacillum alkenivorans AK-01] gi|218761396|gb|ACL03862.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 798 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 73/233 (31%), Gaps = 22/233 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + P + A+ +L + G L A Y K+L +P + Sbjct: 506 YEMGNIEEAVQGYYRALTYKPDSD-LALNNLGLIMAKNGKLQEAVEYYEKSLAANPQSAE 564 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-LIARSLENADKGDMIASYHD 248 + V +A F Q + R A + + +L +G + Sbjct: 565 TMANMGDAQVALGNLEKAKGFYTQALSVDTDSFRVHASMGKLLINLGEFQQGLDQFAAAL 624 Query: 249 AI--ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSE 305 AI + + ++ + A + L + LE + P P AN + Sbjct: 625 AIDHQDQETQNDL----LLALRILNEIER-------LEDAIQTQPNQP--ANYFALAKLL 671 Query: 306 NTVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 K RA +L E L ++K+ ++ G D+A + ++ Sbjct: 672 GRYNKTDRAEQLCLQGLEKAPSDPNGLNQLAKVRMDQGRYDEAEKLLLETARV 724 >gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase [Acaryochloris marina MBIC11017] gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina MBIC11017] Length = 810 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 95/309 (30%), Gaps = 13/309 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + + N A + + + E + L + +Y A + + +L+ Sbjct: 348 GQQAAQSGNWQSATENFEQALELKADYTEAALKL--GETYAEIGKYPEAIAQFDTLLKQQ 405 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A G +A +AL + P V ++ AI Sbjct: 406 PKTAAAFRERGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAI-- 463 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A N+A + +G + A+ + ++++ N + A + Sbjct: 464 --ADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYR 521 Query: 271 ISQNKKRKAEVILEKIWK--VNPHPEIA-NIYTHLLSENTVGKLKRALRLEEINKESVES 327 AE EK K V + A Y + + + IN + + Sbjct: 522 SVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQALTINPQLTRA 581 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQ--ANSHNTDKILYWTQS 384 + + E G I+QA A++I P +LL ++ + + L Sbjct: 582 HTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQQADFEGALQDYDR 641 Query: 385 ALHA-MPDP 392 A+ DP Sbjct: 642 AIAINPKDP 650 >gi|26991366|ref|NP_746791.1| hypothetical protein PP_4682 [Pseudomonas putida KT2440] gi|24986431|gb|AAN70255.1|AE016665_8 lipoprotein, putative [Pseudomonas putida KT2440] Length = 266 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 4/106 (3%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 +S L L Q +N A LE +I +Y L Sbjct: 150 AAGGLSADEQLDGPVLALLTTAQTQQGSGDFNGAASSLERAQRIAPREPQVLYRLAQVRL 209 Query: 166 RIGDLNSAQRYATKALDIS---PDA-PWVTEAVVQQYVLAKEWSRA 207 GD A++ A +AL + P + + Q + + A Sbjct: 210 SQGDAAQAEQLARRALTYANGRPSLQAELWNTIAQAREKQGDSAGA 255 >gi|85710694|ref|ZP_01041758.1| hypothetical protein NAP1_09792 [Erythrobacter sp. NAP1] gi|85687872|gb|EAQ27877.1| hypothetical protein NAP1_09792 [Erythrobacter sp. NAP1] Length = 665 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 66/209 (31%), Gaps = 13/209 (6%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 Y KG+ AL G + + + A Y + + Q +A Sbjct: 438 YAKGHLAL--GYV-LNFGRMDRAGAYPHYKRAEELAPGDADTMRSVATFYSFGNQRALAM 494 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + +E ++++ A S F + G + A Y KAL+++P A+ + Sbjct: 495 QMIERVVELDPLNALAFRSAGFVALFAGAFDQAIAYMEKALELNPSLANSFYAIGAAKLA 554 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + A + + L ++ GD + + + +S Sbjct: 555 LGDDVGARDAFEAEAID--------LFALPGLAIARRRLGDEAGASEAFSKLVSDYGDS- 605 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKV 289 A+ L + +A +L + + Sbjct: 606 -GLYQQAQVLAQWGESERALAVLTRAFDK 633 >gi|332704145|ref|ZP_08424233.1| tetratricopeptide domain-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332554294|gb|EGJ51338.1| tetratricopeptide domain-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 379 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 83/239 (34%), Gaps = 22/239 (9%) Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + A+Y L + R G ++ A+ +A + + + + ++ +A Sbjct: 85 DKEFKIKALYELGRDYKRAGFVDRARAALEEAQALGGRNKLILSELARLAADGGDYEQA- 143 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L + + + A L+ + E DKG ++L++ S+ A + Sbjct: 144 ATLYSQLDHPQA----EAHYLVQFARELFDKGVEAQGKKTLKKALRVYPGSLEAWLVQLT 199 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIA-NIYTHLLSENTVGKLKRALRLEEINKESVES 327 K + L + PE++ ++ LLS T G+L + ++ E+ Sbjct: 200 REYDAGDKDRLRKTLSDA-LAHVRPELSFILFEGLLSHATKGRLPDSANARTVSLSQTET 258 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 ++V+ + + + + L+LA + + W + AL Sbjct: 259 ELLVAVLN------ELESRHGEILLHYY----GALILA-----LNGRPQEASTWLERAL 302 >gi|332278297|ref|ZP_08390710.1| tetratricopeptide repeat protein [Shigella sp. D9] gi|332100649|gb|EGJ03995.1| tetratricopeptide repeat protein [Shigella sp. D9] Length = 1124 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 663 >gi|225682800|gb|EEH21084.1| pre-mRNA-splicing factor clf1 [Paracoccidioides brasiliensis Pb03] Length = 677 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 76/240 (31%), Gaps = 26/240 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185 A + + ++P + A++ Y + GD +Y + + +P Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKENP 318 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239 + V+ + + R + R L I +L E + Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378 Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 DM ++ E +KL + A+ I Q + A L P ++ Sbjct: 379 KDMERAHQIYQECIKLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y L E + K + E + + ++ + +++ + ID+A A L + Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497 >gi|198475784|ref|XP_001357159.2| GA19838 [Drosophila pseudoobscura pseudoobscura] gi|198137958|gb|EAL34226.2| GA19838 [Drosophila pseudoobscura pseudoobscura] Length = 586 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 10/151 (6%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + RA + R+ + D + KL +S A+ L+ + A Sbjct: 330 DTIRAYAYMKRASLYMQVNKRDEALADFDAAEKLKPDSPDVYHQRAQILLLLDSINPALE 389 Query: 282 ILEKIWKVNPHPEIA---NIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIV 331 EK ++ P+ IA YT + +++ + + + VE ++ Sbjct: 390 QFEKAVRLAPNHAIAYVQKCYTKYRLALMTNNQQGLESVVRQLEQAIDQFPKCVECYSML 449 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 +++ + + DQA AMK+AP Sbjct: 450 AQVMADQQNFDQAQQYYDKAMKLAPTNAALF 480 >gi|195123558|ref|XP_002006272.1| GI18655 [Drosophila mojavensis] gi|193911340|gb|EDW10207.1| GI18655 [Drosophila mojavensis] Length = 662 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG---D 241 P + + + + + + AI + + +L + R+ +G D Sbjct: 366 PTSIERHKKLGNEQLENGKLLAAIDTYSAALAEYPQGE----VLYLNRATALMRRGWFGD 421 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + A+ D E+L+L + + A A++L+ ++ +A+ L++ Sbjct: 422 IYAALRDCHEALRLDPSYVKAHFRLARALLELHRPHEADKCLQE 465 >gi|67642936|ref|ZP_00441687.1| TPR domain protein [Burkholderia mallei GB8 horse 4] gi|121599439|ref|YP_993899.1| TPR domain-containing protein [Burkholderia mallei SAVP1] gi|124386425|ref|YP_001026959.1| TPR domain-containing protein [Burkholderia mallei NCTC 10229] gi|126451387|ref|YP_001079753.1| TPR repeat-containing protein [Burkholderia mallei NCTC 10247] gi|166999704|ref|ZP_02265538.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20] gi|254177047|ref|ZP_04883704.1| TPR domain protein [Burkholderia mallei ATCC 10399] gi|254208928|ref|ZP_04915276.1| tetratricopeptide repeat protein [Burkholderia mallei JHU] gi|254360018|ref|ZP_04976288.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280] gi|121228249|gb|ABM50767.1| TPR domain protein [Burkholderia mallei SAVP1] gi|124294445|gb|ABN03714.1| TPR domain protein [Burkholderia mallei NCTC 10229] gi|126244257|gb|ABO07350.1| tetratricopeptide repeat protein [Burkholderia mallei NCTC 10247] gi|147750804|gb|EDK57873.1| tetratricopeptide repeat protein [Burkholderia mallei JHU] gi|148029258|gb|EDK87163.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280] gi|160698088|gb|EDP88058.1| TPR domain protein [Burkholderia mallei ATCC 10399] gi|238524157|gb|EEP87592.1| TPR domain protein [Burkholderia mallei GB8 horse 4] gi|243064201|gb|EES46387.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20] Length = 614 Score = 41.5 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 4/192 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDAFKRALALTPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G + A +AL++ P + + AI Sbjct: 143 LGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAAIAHFRAAIAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ + H +L L +A A +L ++ + R A Sbjct: 203 HF--VAAHFNLGNALDAI--SQHAQAQHAFEAALALQPRFALALFGLANTLAARGRHRDA 258 Query: 280 EVILEKIWKVNP 291 E+ ++P Sbjct: 259 LPHYERAVGLDP 270 >gi|281179597|dbj|BAI55927.1| conserved hypothetical protein [Escherichia coli SE15] Length = 1124 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|253996237|ref|YP_003048301.1| type IV pilus biogenesis/stability protein PilW [Methylotenera mobilis JLW8] gi|253982916|gb|ACT47774.1| type IV pilus biogenesis/stability protein PilW [Methylotenera mobilis JLW8] Length = 270 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 4/203 (1%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 L +R +A ++ + +I + A L +G A+ +A+ I P+ Sbjct: 66 YLQQRNLEVALDEFTIATKIDPSSAMAYNGLGMVHSALGQDALAEASFKQAVQIEPNNSE 125 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 +I KN AI + + K D+ + Sbjct: 126 SHNNFGNFLCSRGRVDESIKEFMAAVKNPLYAT--PAIAYTNAGVCSLRKQDVRNAEVYF 183 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS--ENT 307 +L+L A+ A ++N A L+ P PE+ + + N Sbjct: 184 QRALQLEPLLHSAAYQLALIQFNRNDVANARNTLQNAMLSRPGPELLWLSVRVARLLGNH 243 Query: 308 VGKLKRALRLEEINKESVESLVI 330 + AL L +S ++ ++ Sbjct: 244 DDESSYALELRRQYPDSEQAKLL 266 >gi|218438596|ref|YP_002376925.1| hypothetical protein PCC7424_1618 [Cyanothece sp. PCC 7424] gi|218171324|gb|ACK70057.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 217 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 7/180 (3%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E L+ L Q A + Y A +++ A Y+L G L A+ Sbjct: 37 EELIQ-LGNQAAK-SKNYAQAERLFYNAVKLYPNYPAAYYNLAKALYDQGKLEEAETNYR 94 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 +A+ ++P+ + + AI + +N ++ + Sbjct: 95 RAILLNPEYAEAYNNLGSVLSDQGKLEEAIINFERAI----HFNPQYSLAYNNLGTALHE 150 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN 297 +G + + +++L D + +A L Q K ++A+ +K +NP+ P+ A Sbjct: 151 QGHLEEAQMQYQTAIELDDTNALAYYNLGLVLRDQGKTQEAKANFDKALSINPNLPDPAQ 210 >gi|158520339|ref|YP_001528209.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158509165|gb|ABW66132.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 401 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 58/189 (30%), Gaps = 17/189 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + Y+ A L+ A Y L G+L+ + KAL+++P P Sbjct: 33 TKDYDGAIADFTAYLEQKPDSFQATYMLGRAYLEKGELDKSVATLKKALEMNPGDPEAIL 92 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + YV ++ AI + ++ +R + + + +A+ S Sbjct: 93 FLGVAYVAKADYENAIATFE----SFEDPSRPLLEKAVGKQITLLKIDYNKKLAKEAVAS 148 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI----YTHLLSENTV 308 K A K +K +A + +H+ S V Sbjct: 149 EKKLATVKPPVETYAVFYYEDKTPGKNMAAFQKA--------LAAMTISNLSHINSIQVV 200 Query: 309 GKLKRALRL 317 +L R L Sbjct: 201 ERL-RLQAL 208 >gi|78064817|ref|YP_367586.1| TPR repeat-containing protein [Burkholderia sp. 383] gi|77965562|gb|ABB06942.1| TPR repeat protein [Burkholderia sp. 383] Length = 828 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 69/189 (36%), Gaps = 14/189 (7%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 ++A Y +A+ + P + + + A + A+ + + A ++ Sbjct: 191 DAADAY-RRAIALQPGFRVAHQGLSETLRAAGDLRGAVD----HAREGLDPGDADAHCVL 245 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 AR L+ + D + ++ + A Q + +A +++ Sbjct: 246 ARLLQRMSEFD--KAVELLERAIAIDPAHARAWAWLGDLRNQQGEYGQAVQACRHAIELD 303 Query: 291 PHPEIANIYTHLL-SENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAH 345 PE+A+ Y L + + + +L A +N + ++ ++ L + +D+A Sbjct: 304 --PELADAYNFLGFAYHNLNRLAAAELSYRHAIDLNPDDADAHQNLAAALLRLEKLDEAL 361 Query: 346 AKAMLAMKI 354 +A ++ Sbjct: 362 KHTEIAREL 370 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 26/257 (10%), Positives = 66/257 (25%), Gaps = 54/257 (21%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFES--------CRIGDLNSAQRYATKALDIS 184 + + A R + Y E+ + +A +A+++ Sbjct: 84 SGRLDDAIAHYR--------RAVGLRPDYPEAHNNLGNALRDAREPTAAMESCARAIELR 135 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + E A + + ++ A + +L +K D Sbjct: 136 PGYAEAYNNLGNALQDLGEHEAAAASYAKAVAHQPQY--ADAYCNLGNALNAQEKFD--D 191 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + ++ L +A +++L + R A Sbjct: 192 AADAYRRAIALQPGFRVAHQGLSETLRAAGDLRGAVD----------------------- 228 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLL 363 E ++ ++ +++++ M D+A A+ I P + Sbjct: 229 ----------HAREGLDPGDADAHCVLARLLQRMSEFDKAVELLERAIAIDPAHARAWAW 278 Query: 364 LAQIEQANSHNTDKILY 380 L + + Sbjct: 279 LGDLRNQQGEYGQAVQA 295 >gi|332841590|ref|XP_509717.3| PREDICTED: transmembrane and TPR repeat-containing protein 4 [Pan troglodytes] Length = 590 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 309 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 364 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 365 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 417 >gi|262198154|ref|YP_003269363.1| hypothetical protein Hoch_4981 [Haliangium ochraceum DSM 14365] gi|262081501|gb|ACY17470.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 384 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 83/262 (31%), Gaps = 16/262 (6%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L + +A + Y A L +L + T A + D S KA+++ Sbjct: 98 LLAEAQMAAKDYEGARSTLSQLLGLDETDAAAYAKRGEAAIAQKDYESGLEDIRKAMELE 157 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + + A L + + LL+ +L+ G + Sbjct: 158 PQNLEYRVTLGKGLQETGQNGEAAEVLAAVVEENPAYLDG---LLVYGALQR-SAGKLQD 213 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + +++ S +A + + A L++ ++ + ++ + Sbjct: 214 ARELHQRAVETSPESALAHYELGITQFYMGDRDDALSSLQQATEL----DASDAQIRYVH 269 Query: 305 ENTVGKLKRALRLEE-------INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356 + + R E K+ ++ + + ++ D+A ++ P Sbjct: 270 GELLRNMGRFEEAAERYRDALDRQKDHDKAAAKLGLMLTKLERFDEAAEVLSARVEREPQ 329 Query: 357 RKEIFLLLAQIEQANSHNTDKI 378 + L L Q+ ++ + + Sbjct: 330 DADALLYLGQLHESQEQFAEAV 351 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 35/227 (15%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT------------- 209 E+ G +A+ + +A ++ P+ E V + A+ Sbjct: 34 EARDSGQAAAAEGHYERARELRPEHYETAERYVGFLIAEGRADDAVAEAQEYLEQAIGEL 93 Query: 210 ----FLNQKKKNAKEWNRNRAILLIARSLENADKG-------------DMIASYHDAIES 252 L + + AK++ R+ L L+ D D + D ++ Sbjct: 94 KGYHLLAEAQMAAKDYEGARSTLSQLLGLDETDAAAYAKRGEAAIAQKDYESGLEDIRKA 153 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 ++L ++ + K L + +A +L + + NP + + + + + GKL+ Sbjct: 154 MELEPQNLEYRVTLGKGLQETGQNGEAAEVLAAVVEENPA-YLDGLLVYGALQRSAGKLQ 212 Query: 313 RALRLEEINKE-SVESLVIVSKIALE---MGSIDQAHAKAMLAMKIA 355 A L + E S ES + ++ + MG D A + A ++ Sbjct: 213 DARELHQRAVETSPESALAHYELGITQFYMGDRDDALSSLQQATELD 259 >gi|170696868|ref|ZP_02887964.1| serine/threonine protein kinase [Burkholderia ambifaria IOP40-10] gi|170138042|gb|EDT06274.1| serine/threonine protein kinase [Burkholderia ambifaria IOP40-10] Length = 1349 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 6/162 (3%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAV 157 +AR+ + + L + + A +L++ R Sbjct: 1164 AMAREAVYCATCLDHLPTLGVTMLYLARTYQLAGDRDAARSLSAALLRLSEAHRLRAVGH 1223 Query: 158 YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y+ + D + A + + + + ++ A+ + Q Sbjct: 1224 YAAIIHAWTQEDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAGRGDYDAALAQIRQCL 1283 Query: 216 K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 R L+ + E + D A+++ + Sbjct: 1284 AWCESTGERYYEAQLLLKQCEYLRRADPRCGGVAALDACRRA 1325 >gi|167527386|ref|XP_001748025.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773443|gb|EDQ87082.1| predicted protein [Monosiga brevicollis MX1] Length = 1173 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 21/172 (12%), Positives = 48/172 (27%), Gaps = 18/172 (10%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + ++ L LL+ + A + E +L T A + Sbjct: 52 AEHAYRCALAINPSLYSVRNDLGNLLKA-----TGKNAEARQCYEQVLYYQPTFAVAWNN 106 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-- 217 L A + TKA+ + V ++ + A+ + ++ Sbjct: 107 LGCIELDEQQPQHALQRFTKAVYLDSQLECVYSNLLSILGAEST-AAALGNVANVLRDEG 165 Query: 218 -----AKEWNRN-----RAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + R+ A + + + + E++KL + Sbjct: 166 QLLAAQHVYKRSLGLSPSAHVHAGLAALFHRSQQLPEAARHYQEAIKLNPSF 217 >gi|134295461|ref|YP_001119196.1| cellulose synthase domain-containing protein [Burkholderia vietnamiensis G4] gi|134138618|gb|ABO54361.1| cellulose synthase operon C domain protein [Burkholderia vietnamiensis G4] Length = 1307 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 19/220 (8%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM--L 147 GL ++A ++ A + + ++ + L L +++ A Sbjct: 306 RGLQALARGDLAGADPLLARAARARPDDADALGGLGLLRLREGRHDEARALFARAAALAT 365 Query: 148 QIPATREFAV------YSLYFE---SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + + L + + G A+R A AL + PD+P + Sbjct: 366 TDQRGKWQGLARTAQFWGLLAQGRAAASAGRPQDAERSARAALAMQPDSPDAKLQLADAL 425 Query: 199 VLAKEWSRAITFLNQ--KKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESL 253 + ++W+RA L + ++ LL R+ D + S + Sbjct: 426 LAQRDWARAEPLLRELLAVRSPSVSVVRDTALLYQNTGRAERIGPLLDALQSRVTGSDDR 485 Query: 254 KLCDNSIMASICA--AKSLISQNKKRKAEVILEKIWKVNP 291 + D A + A A++L + ++ A E + P Sbjct: 486 RALDGLR-ADLLATEARALADKGERGPAAQRYEAAVRAAP 524 >gi|186686296|ref|YP_001869492.1| hypothetical protein Npun_R6265 [Nostoc punctiforme PCC 73102] gi|186468748|gb|ACC84549.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 226 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 35/130 (26%), Gaps = 4/130 (3%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + + A E L +++ F + L R A +A+ + Sbjct: 70 LQQANALFNQGDLTGAEENLRKLIKKFPDDAFGHFQLGNVLFRQKKPEEAISAYQEAIRL 129 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 A+ Y W A+T + + + L +L Sbjct: 130 QSKYALAYNAIGMVYASQSRWDEAMTEYKKALEINPNYGE----ALTNFALVLWQTNKKD 185 Query: 244 ASYHDAIESL 253 + ++L Sbjct: 186 EALSSLEKAL 195 >gi|296135516|ref|YP_003642758.1| tetratricopeptide repeat protein [Thiomonas intermedia K12] gi|295795638|gb|ADG30428.1| tetratricopeptide repeat protein [Thiomonas intermedia K12] Length = 390 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 57/197 (28%), Gaps = 38/197 (19%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A ++H + + E L Q + A E + + Sbjct: 87 GEYERAVRVHQNLLARADLPREARERAQLALAQDFFKAGLLDRAESAYEDLRRS------ 140 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT-FLNQK 214 YA++AL A++Q ++W++AI + Sbjct: 141 -------------------VYASQAL----------TALLQISERTQDWNKAIARAAELE 171 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + R A ++++ G + +L+ + + A+ Sbjct: 172 LRATGAYQRQIAQYWCELAVQHHAAGRAQEAQQSLDAALQAAPQGVRPRLLRAQWAQQHG 231 Query: 275 KKRKAEVILEKIWKVNP 291 + A +LE I V P Sbjct: 232 ELESALHMLESIDLVQP 248 >gi|238506132|ref|XP_002384268.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357] gi|220690382|gb|EED46732.1| DnaJ and TPR domain protein [Aspergillus flavus NRRL3357] Length = 533 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 7/164 (4%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174 + L L+ + LA A + + T V +G + A Sbjct: 30 DTPLSSLIASAKTHLAGGSPRDALLYFDAAVSRDPTNYITVFQRG--AAYLSLGKNSQAS 87 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNR-NRAILLIAR 232 + L + PD + +W A+ L + KK++ E+N A A Sbjct: 88 DDFDRVLQLKPDFESALLQRARLRANTADWEGALKDLEKAGKKSSLEYNEIQEARDAAAL 147 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + GD A + A ++ S+ A + Sbjct: 148 AQNAEKHGDWEACVNQANVAVLKASASLSLRQTRAHCRFERGDV 191 >gi|304321651|ref|YP_003855294.1| TPR domain protein [Parvularcula bermudensis HTCC2503] gi|303300553|gb|ADM10152.1| TPR domain protein [Parvularcula bermudensis HTCC2503] Length = 854 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 ++ + A A ++ ++ A+ + R GD +A R A Sbjct: 162 KMIAARAHYALGDLLAARSAIDTIIGGDGESMTALLFKAQIALRSGDYGAALRLARGIDA 221 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIARSLENADKG 240 I P V+ + + + A T + + R LL+A + Sbjct: 222 IDPGNVTAGVIAVEALLRIGDEATAQTTITDLAAANPDDPRPTYLKALLLAEQGQMKQAA 281 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 D ++S +E + ++ A+ +++ + +AE +L + A Sbjct: 282 DTVSSIEPWLERREG------GAVFLARLKLAEQRPAQAEQLLRARLREQATDIAARQLL 335 Query: 301 HLLSENTVGKLKRALRLEE---INKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + + + + A LE L + + ++ G ID A A Sbjct: 336 VSILDERGEEAEAARVLERGLAFAPRHPVLLRLKADRLIDAGEIDAAAAVLAPL 389 >gi|193212228|ref|YP_001998181.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327] gi|193085705|gb|ACF10981.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB 8327] Length = 561 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 47/167 (28%), Gaps = 8/167 (4%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM--LQIPATREFAVYSLYFESCRIG 168 + + +L +A YN + E LQ + L E Sbjct: 91 AAVKLAPSNPHYHLYLADLAQDMHDYNRSAELYGQAFDLQPDKPELLYLQGL--ELMSAN 148 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A R KA+ + P ++Q + K + AI N+ + + R IL Sbjct: 149 QPEPAIRVFEKAVSLDPYNDNALSQILQLQIRLKRFPEAIETCNKMLEIDGSNLKLRLIL 208 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + N + E ++ + IS + Sbjct: 209 AELYAKNN----QAARAVATLKEVIQTDPGYVPGWSALFDFYISAGR 251 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 113/323 (34%), Gaps = 24/323 (7%) Query: 84 GYKALYTGLMSIA-AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 G+ AL+ +S + + + + + L L V+ E QY + Sbjct: 238 GWSALFDFYISAGRSADFRRELRAFLDSKAASSEKIDDLARLFIVRSGKQE-QYEAPTRE 296 Query: 143 L--EMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTEAVVQQY 198 E++ P ++ F + L+ I D A + +KA++++ EA++ + Sbjct: 297 FLDELIAVRPRESKLFVLKGLF---EMIHDRQRAGQLCFSKAVELNSSNAEAWEALISAH 353 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-- 256 + E ++A L +K A R LL L G+ + +++++ Sbjct: 354 ISMNEKTQAYALL-RKANAALPGEGLRWKLLEGSLL--LQAGEPKKAATVLQQAVRMKMT 410 Query: 257 ----DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSE-NTV 308 I A I A + K ++ + +++ H +A Y Sbjct: 411 DDDLPLLIRAHISLALAYDGLGMKNRSRQAYTTVLRLDAHNSLAMNNLAYLLAEEGIKLR 470 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQI 367 L A + ++ L + + ++G D+A A++ + E++L L + Sbjct: 471 DALLLATNAVLLEPDNGVYLDTLGWVNYKLGEYDRARILLEKAIETGIEEPEVYLHLGEA 530 Query: 368 EQANSHNTDKILYWTQSALHAMP 390 + + K + A A Sbjct: 531 YRK-LGDEPKAKEMFEKAKAASR 552 >gi|182414971|ref|YP_001820037.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177842185|gb|ACB76437.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 744 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 9/170 (5%) Query: 94 SIAAHNIPLARKMHSYVSQ--QHTFHNEYLV---YLLEVQIALAERQYNIAHEKLEMMLQ 148 +A + A + + + + E L ++ + + A L +L Sbjct: 558 HLALGDAQRALERTADAERSYREALRLEPAALDGRLRLAELLAEQGRDAEAAPLLREVLA 617 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 A A Y + R GD +A+ + PD P + A + + A+ Sbjct: 618 RDAGSADAHYQIGRLGLRAGDTAMGVHALREAVRLRPDWPAARLTLGNALARAGDMTGAV 677 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 R L + G + + + +L+ + Sbjct: 678 EEFRAALALRPNDLGARNNL----ANALLASGRVAEAIREYETALQQQPD 723 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 12/192 (6%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR-AITFLNQKKKNAKEWNRNRAIL 228 A Y AL + PDA + E + A+ + + RA Sbjct: 434 RAEAIGYFEMALRLKPDAAELHEGLGYLLARDSATQAPALEHAEAALR----LDSARASA 489 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R + G++ A+ +LKL A+ +L++ + +A +LE+ + Sbjct: 490 HNLRGMLLVRAGEIDAAIGAFQRALKLEPKLAAAAANLGSALLAAGRPAEAVPVLERAVE 549 Query: 289 VNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 P H + + L + R L + +++ + ++++ E G + Sbjct: 550 FAPTLAAAHLALGDAQRALERTADAERSYR-EAL-RLEPAALDGRLRLAELLAEQGRDAE 607 Query: 344 AHAKAMLAMKIA 355 A + Sbjct: 608 AAPLLREVLARD 619 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 27/261 (10%), Positives = 71/261 (27%), Gaps = 7/261 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 A + + + L + + + + A + L++ A + Sbjct: 467 ATQAPALEHAEAALRLDSARASAHNLRGMLLVRAGEIDAAIGAFQRALKLEPKLAAAAAN 526 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G A +A++ +P A+ + + A + + Sbjct: 527 LGSALLAAGRPAEAVPVLERAVEFAPTLAAAHLALGDAQRALERTADAERSYREALRLEP 586 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R L + ++G + E L S A + + Sbjct: 587 AALDGRLRLAELLA----EQGRDAEAAPLLREVLARDAGSADAHYQIGRLGLRAGDTAMG 642 Query: 280 EVILEKIWKVN---PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 L + ++ P + + + G ++ + + + ++ L Sbjct: 643 VHALREAVRLRPDWPAARLTLGNALARAGDMTGAVEEFRAALALRPNDLGARNNLANALL 702 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 G + +A + A++ P Sbjct: 703 ASGRVAEAIREYETALQQQPD 723 >gi|115376114|ref|ZP_01463359.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310821025|ref|YP_003953383.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115366929|gb|EAU65919.1| TPR repeat protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309394097|gb|ADO71556.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 459 Score = 41.5 bits (96), Expect = 0.31, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 80/272 (29%), Gaps = 16/272 (5%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL + + +A + ++ L L + + A A E Sbjct: 75 RALTEAQVKAGRGDAWIAELQRRNSQAERAVNHYMLGLALFSRASDAG---APAVAAFER 131 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + + + Y L +A +A +++P V + + + Sbjct: 132 AIALAPSEPEFHYRLGIAHLESEQYTAALGPLRRAAELAPGKAAVRLPLAKALFRTGDAP 191 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS-IMASI 264 A+ LN + + + + + G A+ E +KL I Sbjct: 192 GAVAALNAVVRASPSPAEVATARALMNQIADPFVGFPKAAEGKLEEGIKLLQELDIPQQA 251 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 A + Q+ A V H + Y L ++ + + E Sbjct: 252 ILAFEELLQSYPDLAVV----------HALLGLAYQRL--DDAGRAVDEFKQAIERAPRD 299 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + + ++ L D A A+++ P Sbjct: 300 GKNYLYLGELYLSRQRSDAAREAYTKAVELNP 331 >gi|330881884|gb|EGH16033.1| TPR domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 556 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 74 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKR--YPDDKRLRLTYARMLV 246 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|329847187|ref|ZP_08262215.1| transglutaminase-like superfamily protein [Asticcacaulis biprosthecum C19] gi|328842250|gb|EGF91819.1| transglutaminase-like superfamily protein [Asticcacaulis biprosthecum C19] Length = 1097 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 72/237 (30%), Gaps = 53/237 (22%) Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 ++ AI + + + N R L +KGD + + DA+ ++ + +SI A Sbjct: 754 DYPAAIDAVTRVL----DINPADPAARYLRGLILLEKGDAVRALDDALANVMMQPDSIEA 809 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY------------------ 299 ++ A + + + KA +L+ N H + + Sbjct: 810 TLFLATAYQANIQYDKAVEVLQAAITKNDKDARLHAALGEAFLRCATQAECDSNRPKAVE 869 Query: 300 ------------------THLLSENTVGKLKRALRL---EEINKESVESLVIVSKIALEM 338 + E+ + R + + +S + L+ + Sbjct: 870 AYNKAIALEPSVDLYLNRARVRPES--ERAARFSDIDAALALQPDSTKILLTRGQFYRSY 927 Query: 339 GSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393 D A A A + P + L A I +N + + AL DP Sbjct: 928 KDYDLALADADAIQALEPDSTEAYSLRANIYADQGNNDAEFIQ-LDKALALKPEDPD 983 >gi|254481605|ref|ZP_05094849.1| kinase domain protein [marine gamma proteobacterium HTCC2148] gi|214038233|gb|EEB78896.1| kinase domain protein [marine gamma proteobacterium HTCC2148] Length = 839 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 59/404 (14%), Positives = 117/404 (28%), Gaps = 82/404 (20%) Query: 2 LRLIRYFFVISLVICS-FIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 LR++ V+ + W + S + Sbjct: 351 LRMLIIVVVLGGAGFGGYTW-----------WQGQQGSVSKDQRAVTAELAKAFSAM--- 396 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLM------------SIAAHNIPLARKM-- 106 + P + D G A G+ +IAA + AR+M Sbjct: 397 ---NEENLPVAASSFYKVLSMDGGNDAAQQGMAEVGALYTAQIEEAIAAEDEDKARRMLL 453 Query: 107 ---HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + + + + LL Q LA Q A + L Sbjct: 454 DYGGYFAASNNLERLQAEIELLAEQKNLANIQSQRAQKLLSQ---------------VDA 498 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK-KNAKEWN 222 S D A R +A I PD P ++ A + +A + ++ N Sbjct: 499 SVEADDFEQANRLIAQAAAIDPDHPE-----LEGRRDAVDTYQAQSAAYEELWANYTPAQ 553 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV- 281 R +IA + D+ D+ A+ E+ + +S + + +Q K +A+ Sbjct: 554 REEFNSMIAAADRALDENDLGAATIAVNEAQNIASDSPELASRIGRIEAAQIKLAEAQAE 613 Query: 282 -------ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES------- 327 +L++ E A N + + + ++ Sbjct: 614 ELARLNSMLDEA-------EGATSAIAADPANAAIAMAIYQEVAVQSPDNPRVTKGLASI 666 Query: 328 ---LVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 + +++ A++ G D A ++ P + + L AQ+ Sbjct: 667 AGFYLGMAEDAVKAGDFDSARQALAAGQELLPDSELLATLHAQL 710 >gi|163742553|ref|ZP_02149939.1| hypothetical protein RG210_06689 [Phaeobacter gallaeciensis 2.10] gi|161384138|gb|EDQ08521.1| hypothetical protein RG210_06689 [Phaeobacter gallaeciensis 2.10] Length = 818 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 38/285 (13%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATREF 155 A + LA V + H + L E +IA E +A E + + + Sbjct: 474 AGDPHLAGAALRSVDRTGVEHVPE-INLAEAEIARLEGDVETVAQELTDEVAERTENAPR 532 Query: 156 AVYSLY------FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A+ L + + A Y SP + AVV L E+ + Sbjct: 533 ALIELIDLSFAERSALSPDVPDLAASY-EVENRDSPLGADLRRAVVAALALTGEFHDSFN 591 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + R A+ + L Y I + + A+ Sbjct: 592 ELEVLSRRDGPAARTAALEPLLTLLTERADDVTFLQYALVIAANGTTAEVAPVADIVAER 651 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 L+ ++A+ IL+K + NT +L A + + S + Sbjct: 652 LLDLGFAQQAQSILKK--------------LAMEPGNTKRRLILAK--AALAMDKPHSAL 695 Query: 330 -------------IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + ++ G +A + + F Sbjct: 696 VELMGLSGSAANKLRAEALWRNGEYARAGEYLLEEQEKDAAARGF 740 >gi|194367814|ref|YP_002030424.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3] gi|194350618|gb|ACF53741.1| polysaccharide deacetylase [Stenotrophomonas maltophilia R551-3] Length = 890 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 2/86 (2%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +R RA R L+ + + E+LKL + A+ Q + Sbjct: 767 AGPASDRQRAQQANDRGLQLYREKQYDEAVAQFTEALKLRPDFAQAANNLGFVYYRQQRY 826 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHL 302 +A LE K++P A Y +L Sbjct: 827 AEAARWLENTLKIDPSR--AVAYLNL 850 >gi|119570522|gb|EAW50137.1| interferon-induced protein with tetratricopeptide repeats 1, isoform CRA_b [Homo sapiens] gi|119570523|gb|EAW50138.1| interferon-induced protein with tetratricopeptide repeats 1, isoform CRA_b [Homo sapiens] Length = 447 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 192 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 251 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262 + + A+ ++ + KG + ++ +++ +A Sbjct: 252 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 311 Query: 263 SICAAKSLISQNKKRKAE 280 + A+ I RKAE Sbjct: 312 HLDLARMYIEAGNHRKAE 329 >gi|118785037|ref|XP_314265.3| AGAP003363-PA [Anopheles gambiae str. PEST] gi|116128163|gb|EAA09649.3| AGAP003363-PA [Anopheles gambiae str. PEST] Length = 676 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 71/211 (33%), Gaps = 13/211 (6%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y++ + GD +A + +A+++ P+ + Y E RA L + + Sbjct: 428 YNIARLATDQGDRATAFTFYRRAIELHPEYEAAHMNLGNLYRETHELDRAEWHLRRAIEI 487 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + L I ++ + D A+ +L+L N I + Sbjct: 488 HEPFPSAWMNLGIVQA----ARKDHDAALTSYQRALQLKPNYANCLYNLGNLYIDKQNSS 543 Query: 278 KAEVILEKIWKVNP-HPEIANIYTHLLS-ENTVGKLKRALRLEEIN----KESVESLVIV 331 A + + NP H + + ++L+ + + + +R + L Sbjct: 544 MALRYWREAIQQNPRH---SKAWANILALYDNRDRTEDIIRTSALALTFLPNDTAILFTR 600 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + ++G + A + + P ++ Sbjct: 601 ANAYGKLGQYETAESLYHQIIAARPDHAVYR 631 >gi|82545001|ref|YP_408948.1| hypothetical protein SBO_2577 [Shigella boydii Sb227] gi|81246412|gb|ABB67120.1| conserved hypothetical protein [Shigella boydii Sb227] Length = 1124 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 663 >gi|332197746|gb|AEE35867.1| superkiller protein 3-like protein [Arabidopsis thaliana] Length = 1168 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 30/179 (16%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLEN 236 A + SP A W + + K+WS A+ L + + A+ L + L Sbjct: 111 RDASEKSPKAFWAFCRLGYIQLHQKKWSEAVQSLQHAIRGYPTMSDLWEALGLAYQRLGM 170 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 I +Y AIE L + I A + +A + RK + E+ K++P Sbjct: 171 F--TAAIKAYGRAIE---LDETKIFALVESANIFLMLGSYRKGVELFEQALKISP----- 220 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + L + L+ SK + +G+ A + A K A Sbjct: 221 ---------------QNISVLYGLAS----GLLSWSKECINLGAFGWAASLLEDARKAA 260 >gi|320327393|gb|EFW83407.1| TPR domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 556 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 74 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKR--YPDDKRLRLTYARMLV 246 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|320325688|gb|EFW81749.1| TPR domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] Length = 556 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 12/230 (5%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 QIA A E + + T A + + R G + + Y + L Sbjct: 74 QIAEYMGADQSALETALIWARNAPTDLEAQRAAAIQLARAGRYDDSLVYMERVLQ---GQ 130 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + L + ++ N L+ ++L GD S Sbjct: 131 GDTHFDFLALSAAETDPDTRNGLLKSFDRLLGKYPNNSQ-LIFGKALLLQQNGDAEQSLK 189 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLS 304 +E + I + A+ L S N+ ++A +LEK K +P+ + Y +L Sbjct: 190 L-LEDNPPKEGEIAPILLHARLLQSMNRGKEAVPLLEKSIKR--YPDDKRLRLTYARMLV 246 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 E + L + + E ++ + LE + D+A + Sbjct: 247 EQNRMEDAKVQFSALLQQYPDDDELRFSLALVCLEAKAWDEAAGYLEELI 296 >gi|303248745|ref|ZP_07334997.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] gi|302489832|gb|EFL49761.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] Length = 1308 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 82/309 (26%), Gaps = 50/309 (16%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQY 136 + AL G + + A+ + N + Q Sbjct: 645 RDKQAEIALGLGTSAALSG--RPAKAVEPLSRALGLLDNGPRKAKAIMTLAQAYGTLGNS 702 Query: 137 NIAHEKLEMMLQIP---ATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTE 192 A P + A + GDL +A++ +AL +S + Sbjct: 703 QKAIAFWRQAAAAPGALRSDVAASQENLGYALTGAGDLPAAEKAFRRALALSGPNWRLLS 762 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A+ Q + A+ + + A+ L L G + D ++ Sbjct: 763 ALGQIAYKTGRYQEALDDFTRSLALNPDPATRIAMALCYEKL-----GKPGLALVDYDKA 817 Query: 253 LKLCDNSIMASICAAKSLISQ------NKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 + S ++ + R I + +K + Y Sbjct: 818 ---APDLASLSAQDRRAYYRAQGFLYAGESRNEAGI--EAFKAT----LELGY----DPE 864 Query: 307 TVGKLKRALRLEEINKESVESLVIV-----------------SKIALEMGSIDQAHAKAM 349 T +L R RL +E+ ++L V + +A D+A Sbjct: 865 TATRLGRLERLAGHPEEAKKTLEAVDPATLPPDLKIMRLSELASLAEADKDYDRARKFLE 924 Query: 350 LAMKIAPRK 358 A+ I P Sbjct: 925 AALAIRPDA 933 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 88/306 (28%), Gaps = 40/306 (13%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 L + AH + + H + +L + E + A ++ E+ L++ Sbjct: 23 QALAAGNAHEVGATDGKDKSWIGRQLSHFKAYPHLDMAYRRMKENRLEDAQKEFELYLKL 82 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A +G ++A A + L PD + A + A+ Sbjct: 83 QPDDLAARGDYMDLLYDLGRYDAAMAEAHRILAAKPDNAAALLTSGLCLMRAGDLKSAVA 142 Query: 210 FLNQ--KKKNAKEWNRNRAILLIA-------------------------RSLENA----- 237 + Q K A+L A +L+ A Sbjct: 143 PMEQAVALTKDKPVPHRVAVLATADVLAKLGRYQQALSLLSGLPETADNYALDQAKGVLW 202 Query: 238 ----DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH- 292 D ++++ A+ + + A + RKA L + + P Sbjct: 203 AKKGDAAQAVSAFEKALAAAGNDKEKLATLRALAVASADTGDARKAGAYLTEARALAPKD 262 Query: 293 PEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P++ + + L + ++E+ + ++ + + D A A+ Sbjct: 263 PDLLHQQAVLANKAGRFEEAARLGQELTRLAP-TLENKLFLANVLASLKRYDAAAAELTP 321 Query: 351 AMKIAP 356 + P Sbjct: 322 LLAQKP 327 Score = 36.8 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 44/283 (15%), Positives = 85/283 (30%), Gaps = 49/283 (17%) Query: 134 RQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A E L + + +L S GD A Y T+A ++P P + Sbjct: 206 GDAAQAVSAFEKALAAAGNDKEKLATLRALAVASADTGDARKAGAYLTEARALAPKDPDL 265 Query: 191 --TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +AV+ + A + + A L +A L + + D A+ Sbjct: 266 LHQQAVLANKA--GRFEEAARLGQELTRLAPTLENK---LFLANVLASLKRYDAAAAELT 320 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWKVNPHPEIANIY----THLL 303 + + K A + + +A+ P+ A Y L Sbjct: 321 PLLAQKPKPK------EAYRLNMRLGVLAMQADK-----------PDEAAAYFRAAVDLR 363 Query: 304 SEN-TVGKLKRALRLEEINKESVESLVIVSKIALE-------------MGSIDQAHAKAM 349 E + +L RA + +E+ ++L + + + A Sbjct: 364 REPLALIRLSRAEQRAGRTQEAAQALHEAVSMGADPNTLLELATLLTKLDKNTAAITYLD 423 Query: 350 LAMKIA--PRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAM 389 A+ A P++ +L + A + + + AL A Sbjct: 424 KALAEAKDPQQRSHILAMKATLLAETGDNAAARKVLEEALQAP 466 >gi|197128016|gb|ACH44514.1| putative tetratricopeptide repeat domain 1 [Taeniopygia guttata] Length = 255 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 5/91 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 ++ A + + + ++RA+L R+ + A+ D ++++L + Sbjct: 114 KKGDYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPH 173 Query: 259 SIMASICAAKSLISQNKKRKAE----VILEK 285 I A + A+ K +A +LEK Sbjct: 174 YIRALLRRAELYEKTEKLDEALEDYKAVLEK 204 >gi|218438243|ref|YP_002376572.1| hypothetical protein PCC7424_1257 [Cyanothece sp. PCC 7424] gi|218170971|gb|ACK69704.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424] Length = 237 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 7/131 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 ++ D A KAL+ P+ Y+ +++ +AIT + K + Sbjct: 97 QLKDFPKALADYQKALEFEPELVEAYINRGNVYLELEDYQKAITDYTEALKFNPD----E 152 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A +L + G+ + + ++++L A ++KA +K Sbjct: 153 AFAHNNLALAYFNLGNPERAKLELTKAVELDPAYGEAYFNRGLVFFELGDEQKARADFQK 212 Query: 286 I---WKVNPHP 293 W+ +P Sbjct: 213 AAQLWQQEGNP 223 >gi|251800015|ref|YP_003014746.1| hypothetical protein Pjdr2_6057 [Paenibacillus sp. JDR-2] gi|247547641|gb|ACT04660.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. JDR-2] Length = 847 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 23/206 (11%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-- 226 D ++A + KA I P P +L ++ A+ L + + Sbjct: 195 DYHTALQALNKAQGIDPGHP-------DLLILRAKYDMAVGRLELALDHLTGLTKQDPQD 247 Query: 227 -ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + RS G +Y L L + K +S +A L++ Sbjct: 248 YYAIYYRSGLLYRMGHYEEAYAGYQSILPLRPEATDVLFSLGKCAVSIGLHHEAIGYLKQ 307 Query: 286 IWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + + PH E + + Y ++ + +++E+ + L Sbjct: 308 LDDILPHDEEVINLLLSAYRF--------RIDELNAIYNDEPQNMEAGHELVAAYLACHQ 359 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +++A+ + P +++ +AQ Sbjct: 360 LEEAYQLLTELEEKHPSVRLYVQMAQ 385 >gi|110165339|gb|ABG49879.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium erythraeum IMS101] Length = 559 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 14/108 (12%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216 L D SA +A+DI +++ AI N+ K Sbjct: 442 RGLA--KYEQQDYQSALAEFDRAIDIDSSHIDAYIYRGDAKDKLEDYEGAIADYNEAIKI 499 Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + K + +L GD + D +++KL N Sbjct: 500 DSSHPKAYYSRENVL--------RKAGDSREAIADYDQAIKLDPNYTP 539 >gi|313894392|ref|ZP_07827957.1| tetratricopeptide repeat protein [Veillonella sp. oral taxon 158 str. F0412] gi|313441216|gb|EFR59643.1| tetratricopeptide repeat protein [Veillonella sp. oral taxon 158 str. F0412] Length = 164 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 12/162 (7%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ GD A AT ++ +P++ L + A + KK + Sbjct: 12 KQALSSGDYAKAIEEATASIKDNPNSSEAYSVRGFAMALHGD--TAKGLADTKKAYDLDP 69 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 N ++ +G + S + L+ ++ + A Q KA Sbjct: 70 NN--VANYYNMAMVYKLQGQLNDSKQWFEKVLEKDPSNTWSVYGIATIYADQGDDTKALD 127 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKL---KRALRLEEI 320 LEK +NP ++ ++ + R L + Sbjct: 128 WLEKAININP-----SVKAVAAEQDHFERFHNNARFKTLVGL 164 >gi|262304963|gb|ACY45074.1| acetylglucosaminyl-transferase [Semibalanus balanoides] Length = 289 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 69/185 (37%), Gaps = 11/185 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A+++ P+ P + + + N + A L + Sbjct: 10 RHAIELQPNFPDAYCNLANALKEKGLVAESEECYNTALRLMPT----HADSLNNLANIKR 65 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++G + +++L++ A A L Q K +A + ++ ++ P A+ Sbjct: 66 EQGYTEEAIRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPT--FAD 123 Query: 298 IYTHLLS-----ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y+++ + ++ L+ R +IN ++ ++ I + G+I +A A+ Sbjct: 124 AYSNMGNTLKEMQDIPAALQCYSRAIQINPAFADAHSNLASIHKDSGNIPEAIQSYRTAL 183 Query: 353 KIAPR 357 ++ P Sbjct: 184 RLKPD 188 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 6/157 (3%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 ++ + H + L L I + A L++ A +L Sbjct: 42 CYNTALRLMPTHADSLNNL--ANIKREQGYTEEAIRLYLKALEVFPEFAAAHSNLASVLQ 99 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + G LN A + +A+ I P + ++ A+ ++ + + Sbjct: 100 QQGKLNEALMHYKEAIRIQPTFADAYSNMGNTLKEMQDIPAALQCYSRAIQINPAF---- 155 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A + + D G++ + +L+L + A Sbjct: 156 ADAHSNLASIHKDSGNIPEAIQSYRTALRLKPDFPDA 192 >gi|74220680|dbj|BAE31546.1| unnamed protein product [Mus musculus] Length = 386 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 37/255 (14%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + +L ++ A +E L + + + + R + Sbjct: 122 KAVRLNPEDPYLKVLLALKLQDLGEHVEAEAHIEEALSSTSCQSYVIRYAAKYFRRKHRV 181 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A +AL SP + ++ + + + + L Sbjct: 182 DKALHLLNRALQASPSSGYLH-----------------------YQKGLCYKQQISQLRT 218 Query: 231 ARSLENADKGDMIASYHDAI----ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +R+ + + ++ AI E+LKL MA +C A+ ++ +AE +K Sbjct: 219 SRNRQPRRQDNVQELAQQAIHEFQETLKLRPTFEMAYVCMAEVQAEIHQYEEAERNFQKA 278 Query: 287 WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 + H+ + + R R + +K+S + + + L++ A Sbjct: 279 LNNK------TLVAHIEQDIHL----RYGRFLQFHKQSEDKAITLYLKGLKVEEKSFAWR 328 Query: 347 KAMLAMKIAPRKEIF 361 K + A++ + + Sbjct: 329 KLLTALEKVAERRVC 343 >gi|33864076|ref|NP_895636.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33635660|emb|CAE21984.1| TPR repeat [Prochlorococcus marinus str. MIT 9313] Length = 549 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 75/249 (30%), Gaps = 17/249 (6%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATK 179 L + + + A + +L + +A+ S+ E R + + ++ Sbjct: 3 QLQAAVALHKQGELDKAEAIYQQVLAVDVNNFYALNFCGSIKREKKR---FDEGIDFLSR 59 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ + PD P + + ++ W AI+ + A+ + L+ ++ Sbjct: 60 AISLQPDNPDAIYNLGNVFKDSERWDEAISCYEKTL--GLRAESPEALNNLGICLKEVER 117 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + + + A + + Q K +A+ + P+ Y Sbjct: 118 FEYSE--IVLRRVVSMQPGLAGAWLNLGNTFKEQEKYSEAKASYRNAIDLK--PDFEAAY 173 Query: 300 THL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L + + E+ + + + + E G + A + Sbjct: 174 FALGLVLKEEGKVEEAIASYRKAIELKPDFADVYFALGLVLKEAGEFEAARQIVSALSTV 233 Query: 355 APRKEIFLL 363 ++ LL Sbjct: 234 NAMEDSTLL 242 >gi|313157937|gb|EFR57343.1| tetratricopeptide repeat protein [Alistipes sp. HGB5] Length = 994 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 86/263 (32%), Gaps = 28/263 (10%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL + A ++ A++ + + + L + +IA A+ Y +A K L+ Sbjct: 434 RGLEAYNAGDMRAAQRYLAESAAINVSPKYSALNSFWQGEIAFAQGDYTVAAAKYNAYLK 493 Query: 149 I----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISP----DAPWVTEAVVQQYVL 200 A+Y+L + + D+ A+ K L + P + Sbjct: 494 RAPRSEKEYAMALYNLGYCAFSRMDMAQARGSFEKFLAVYPARDRYRADACNRLGDIRYS 553 Query: 201 AKEWSRAITFLNQKKKNAKE----WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 +E+ A+ ++ RA+ L K + A E Sbjct: 554 DREFEAAVAEYDRAAALGGPEKYYAQYKRAVTL-GILGRTEQKQQALRQIIAAGEGDYAD 612 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEK---IWKVNPHP-----EIANIYTHLLSENTV 308 AS +S I+Q + + LEK + +P ++ Y +L + Sbjct: 613 ----EASYELGRSHIAQEQYAEGAAQLEKFVADYPSSPRRAQALSDLGLAYLNL--GDKE 666 Query: 309 GKLKRALRLEEINKESVESLVIV 331 L+ + E +S E+ + Sbjct: 667 KSLRYYDMVVETAPQSSEAKGAM 689 >gi|325107573|ref|YP_004268641.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] gi|324967841|gb|ADY58619.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces brasiliensis DSM 5305] Length = 448 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 4/93 (4%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE-KLEMMLQIPATREF-AVYSLYFES 164 S ++ L L+ A + A + L + + P A Sbjct: 124 ESANRALELNPDDELSLNLQSMALRALGRPLEAEQVALLSLHRNPEIAFSHANRGWGL-- 181 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ 197 D A+++ +AL ++P+ W + ++ Sbjct: 182 LERKDYAGAKKHFREALRLNPNYEWARDGLMAA 214 >gi|297519130|ref|ZP_06937516.1| hypothetical protein EcolOP_15928 [Escherichia coli OP50] Length = 690 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|282164288|ref|YP_003356673.1| hypothetical protein MCP_1618 [Methanocella paludicola SANAE] gi|282156602|dbj|BAI61690.1| hypothetical protein [Methanocella paludicola SANAE] Length = 328 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 89/258 (34%), Gaps = 41/258 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +Y+ A + ++ A Y L +G+ A + +A PD + + Sbjct: 61 RYDDAIREFTAIVNNVPDFSTAHYELAKTYLLMGENREALKEFERAARFEPDNMDIQFFL 120 Query: 195 VQQ----YVLAKEWSRAITFLNQKKKNAKEWNRNRAILL--------------------- 229 L++E A ++ +A NR ILL Sbjct: 121 RYVPQFTKPLSEELKDAQNGVDMDAGDAFAHNRLGVILLMMDSLDCGLQEIQWAVELENK 180 Query: 230 ------IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +A + D+G ++ +A + + ++ A + + ++ A Sbjct: 181 AEYHLNLAYAQSLFDEG---EAWREADLASSMGPENLDALLFLGALYMDLGREADAFATY 237 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E + P H I N+Y + + + +++ ++N ++ + ++++ + Sbjct: 238 EDAVSIYPGSDLLHYLIGNVYFAVQNIG-MARIE-IETAVKLNPDNYAARRALAELYMIS 295 Query: 339 GSIDQAHAKAMLAMKIAP 356 G D+A + +K+ P Sbjct: 296 GRDDKAIDQLEELVKMEP 313 >gi|182412285|ref|YP_001817351.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177839499|gb|ACB73751.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 627 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 63/207 (30%), Gaps = 12/207 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R G L A+ +A+ +P + + + A L + + Sbjct: 18 RAGRLVQAEAQYRQAVLGAPKSFEALHLLGLVNFQLGRMAEAADLLQRALRVNP----QS 73 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + + G + + A A L +QN+ R+A +K Sbjct: 74 APCAMQLGMVLVALGRHKEAEAHLRGVVTRQPQLHEAWTHLAHCLKTQNRLREAIDCYQK 133 Query: 286 IWKVNPHPEIANIYTHLLSENTVGK----LKRALRLEEINKESVESLVIVSKIALEMGSI 341 ++ P +A Y + L+ + + L R I+ E+ ++ + I Sbjct: 134 AIELEPKDALA-WYNYGLTLSLAARPLEALACHERALAIDPHHAEARFGRAQALQQTNRI 192 Query: 342 DQAHAKAMLAMKIAP---RKEIFLLLA 365 +A + P + L A Sbjct: 193 PEAVEDYGRVLARQPGNLEARSYRLFA 219 >gi|33152427|ref|NP_873780.1| hypothetical protein HD1355 [Haemophilus ducreyi 35000HP] gi|33148650|gb|AAP96169.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 396 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 26/180 (14%) Query: 66 LSCPAMLFHMLHKR----NYDKGYKALY--------TGLMSIA--AHNIPLARKMHSYVS 111 L ++ R + ++AL L++ A + A + Sbjct: 77 FEAELTLGNLFRSRGEVDRALRIHQALDSSLNYSIEQKLLAKQQLAKDFMAAGFYDRAEN 136 Query: 112 QQHTFHNEY------LVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE- 163 +E L L+ + ++ A E +L+ P T + Y E Sbjct: 137 YYILLLDEPEFAVNSLTQLMV--LYQKTNEWKKAINVAEKLLKIDPKTDRIPLSHYYCEY 194 Query: 164 --SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + D + R KAL+ SP + + Y+ ++S+A+T ++ Sbjct: 195 AQAIKSEDEDLYLRLLGKALEYSPLCTRASMLLGDYYLAQGQFSQALTHFEHILVQDPDY 254 >gi|71414808|ref|XP_809492.1| vesicular transport-associated repeat protein [Trypanosoma cruzi strain CL Brener] gi|70873884|gb|EAN87641.1| vesicular transport-associated repeat protein, putative [Trypanosoma cruzi] Length = 1174 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 83/296 (28%), Gaps = 15/296 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 AR++ + L + A A R A E + + R A Sbjct: 573 EEAEARRLAEEAEARRLAEEAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEE 632 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV----QQYVLAKEWSRAITFLNQK 214 E+ R+ + A+R A +A + A + + LA+E + A + Sbjct: 633 ---AEARRLAEEAEARRLAEEAAEARRLAEEAEARRLAEEAEARRLAEEAAEARRLAEEA 689 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A L + E + + A E+ A++ Sbjct: 690 EARRLAEEAAEARRLTEEAAEARRLAEEAEARRLAEEAEARRL------AEEAEARRLAE 743 Query: 275 KKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + +A + E+ + E A L E + E +++ Sbjct: 744 EAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEEAEARRLAEEAAEARRLAEE 803 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A E + + A+A + A + + E + + A A Sbjct: 804 AAEARRLAEEAAEARRLAEEAEARRLAE--EAAEARRLAEEAEARRLAEEAAEARR 857 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 78/292 (26%), Gaps = 6/292 (2%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 AR++ + L A +A E E E Sbjct: 371 EEAEARRLAEEAEARRLAEEAAEARRL----AEEAEARRLAEEAAEARRLTEEAAEARRL 426 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + E+ R+ + A+R A +A + A EA A+ A ++ Sbjct: 427 AEEAEARRLAEEAEARRLAEEAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAE 486 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + R A + A++ + +A + A++ + + Sbjct: 487 EAAEARRLAEEEAEARRLAEEAEARRLAEEAEARRLAEEAEARRLAEEAEARRLAEEAAE 546 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A + E+ + E A L E + E +++ A E Sbjct: 547 ARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEEAEARRLAEEAAEARRLAEEAAEA 606 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + + A+A + L + E + + A A Sbjct: 607 RRLAEEAAEARRLAEEEAEAR--RLAEEAEARRLAEEAEARRLAEEAAEARR 656 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 78/266 (29%), Gaps = 28/266 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 AR++ + L + A A +A E E + Sbjct: 774 EEAEARRLAEEAEARRLAEEAAEARRLAEEAAEA---RRLAEEAAEARRLAEEAEARRLA 830 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 E+ R+ + A+R A +A + A EA + + Sbjct: 831 EEAAEARRLAEEAEARRLAEEAAEARRLAEEAAEAR-------------RLAEEAEARRL 877 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA---AKSLISQNK 275 E R + A + A++ + +A E+ +L + A A A++ + Sbjct: 878 AEEAEARRLAEEAEARRLAEEAEARRLAEEAAEARRLAEEEAEARRLAEEEAEARRLAEE 937 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 + +A + E+ A E +L E ES + + A Sbjct: 938 EAEARRLAEEA---------AEARRLTEEEAEARRLAEEAAEARRLAEEAESRRLAEEAA 988 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIF 361 ++A LA + A + + Sbjct: 989 EARRLAEEAAEARRLAEEAAEARRLA 1014 >gi|71744978|ref|XP_827119.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70831284|gb|EAN76789.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 1351 Score = 41.5 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 93/287 (32%), Gaps = 36/287 (12%) Query: 97 AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATRE 154 + N+ A+ M + + +H + +LL QI ++A + LE + ++ Sbjct: 508 SGNLNKAQAMITTNIRHEHAIPD---AFLLSAQICQYVGNVSLASQALEQALTLDFEVKD 564 Query: 155 FAVYSLY---------FESCRIGDLNSAQ-------RYATKALDISPDAPWVTEAVV--- 195 +Y+L + L A K + P + ++ Sbjct: 565 QPLYNLLYGSVLGMMNKHKEALEALQEALKVVKDKSHVTAKGRLVQPLSVQDHVSLYLLI 624 Query: 196 -QQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Q ++ + A + R + A A + D+ + + Sbjct: 625 AQTHLKLHDAEEARATVAEATALFKDTAQAGRVAIASAM---IAARTDVDRALEILRQVP 681 Query: 254 KLCDNSIMASICAAKSLI--SQNKKRKA---EVILEKIWKVNPHPEIANIYTHLLSENTV 308 D I A A + QN++ A E ++E++ + + YT++ + Sbjct: 682 PRSDFFIAAKTRMANIYLIHRQNRQMYAECFEQLVEEVATAQSYIALGEAYTNI--QEPE 739 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + + I+ ++ + V++ + + +A A+ Sbjct: 740 KSISAYEKAKAIDPDNSDLAVLIGRALVSTHDYQRAIRYYRDAVASD 786 >gi|313199820|ref|YP_004038478.1| hypothetical protein MPQ_0043 [Methylovorus sp. MP688] gi|312439136|gb|ADQ83242.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 876 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 60/202 (29%), Gaps = 21/202 (10%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF---LNQKKKNAKEWNRNRAI 227 +AQ AL + P + + + AIT L + N + Sbjct: 329 AAAQDLFATALAMEPQNDNARYGLALVFAREQNHEEAITVAQGLPANDAGRNDLLLNAYL 388 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L ++ D + A ++ L AS+ A S +A + ++ Sbjct: 389 ALAKQAYGQQDSQQTLNYLQQAKQAGAL-PRY--ASLMEAWSQFGLGNTTQAAEVFASLY 445 Query: 288 KVNPHPEIA----NIYTHLLSENTVGKLKRALRLEEINKES-----------VESLVIVS 332 + P E A Y L + + L L K E+ + + Sbjct: 446 RAQPDKESAAGVMASYLKLDRADDIAPLATTEPLASQYKHHVAAGLFGQKRFFEARALDA 505 Query: 333 KIALEMGSIDQAHAKAMLAMKI 354 + G I A A +A++ Sbjct: 506 DTYGDAGGIAAPQAGAGIALRD 527 >gi|302342825|ref|YP_003807354.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] gi|301639438|gb|ADK84760.1| response regulator receiver protein [Desulfarculus baarsii DSM 2075] Length = 349 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 70/192 (36%), Gaps = 21/192 (10%) Query: 125 LEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L + E+++ A E +L I + E Y++ + S G A Y KA Sbjct: 145 LYAKGLQLMEEKRWEEALESFRRILGIYESAEI-YYNMGYISTARGSYEEAIHYFRKATQ 203 Query: 183 ISPDAPWVTEAVVQQY-------VLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----- 230 I+ E + + Y + K + A +++ ++ +L + Sbjct: 204 INNAFAQAHEKMGECYRQLARPKLAQKHFELAADIYMERRMDSNAEQVLNQVLELNPNTI 263 Query: 231 ----ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + +G + ++LK+ ++ A+ ++A ++LE+ Sbjct: 264 NVYNSLGILYRRQGRYELAIKQYKKALKVNPEAVNIHYNLARIYYETKDYQRALILLEQA 323 Query: 287 WKVNPHPEIANI 298 K+N P+ A+ Sbjct: 324 LKIN--PDFADA 333 >gi|284036905|ref|YP_003386835.1| hypothetical protein Slin_1991 [Spirosoma linguale DSM 74] gi|283816198|gb|ADB38036.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74] Length = 367 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 81/220 (36%), Gaps = 30/220 (13%) Query: 189 WVTEAVVQQ--YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++ + +E+ AI F ++ ++ A R L D + Sbjct: 51 EAAQFFLKGNVQLQKREYKEAIRFYSEAIAKKSDF----ADAYNNRGLAKFRDDDREGAL 106 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-----LEKIWKVNP--HPEIANIY 299 D +++L + A A+ L+ A + + K ++ + + ++Y Sbjct: 107 ADYTRAVELDPDFGTAYFNRAEVLLETGDA--AGSVSDLMRINKQYQDSTFYQTRLGDVY 164 Query: 300 THL-LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L RAL+L N ++VE+L + + DQA A+++ P++ Sbjct: 165 VRLGKQAEAQAAYDRALQL---NPDNVEALTNRGALLYSQKAYDQAGEDIQRALRLNPKQ 221 Query: 359 EIF-----LLLAQIEQANSHNTDKILYWTQSALH-AMPDP 392 + LLLA++ N + L + + AL P Sbjct: 222 DAALNNQSLLLARV-----GNFAEALVYVERALALQPRQP 256 >gi|229496266|ref|ZP_04389986.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406] gi|229316844|gb|EEN82757.1| putative TPR domain protein [Porphyromonas endodontalis ATCC 35406] Length = 1009 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 100/317 (31%), Gaps = 60/317 (18%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQI----PATR------------------EFAVY 158 + L +A+ A + P TR E Sbjct: 177 IAKLYVASSKMAKGDLQAAEAIYRSLSGDRELAPETRIGMAALSYYSGDYAKAVAEVGEI 236 Query: 159 -----------SLYFES----CRIGDLNSAQRYATKALDISPDAPWVTEAVV--QQYVLA 201 SL + R+GD +A +Y + ++ SP+ + ++ Y+ Sbjct: 237 ERVEPRLASNPSLLQVAGNAYYRLGDAPNASKYLERFIEDSPEFASPEDFLLLGAAYMEQ 296 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIE-----SLKL 255 + ++ AI L Q + K A L + R+L + + I +Y A+E ++ Sbjct: 297 QRYNEAIEPLKQATQ-GKGATGYAASLYLGRALRDQGNYPQAIVAYERAVEESAPTQVRE 355 Query: 256 CDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKL 311 MA + + + R AE L + + H + +L + + L Sbjct: 356 AAMYEMALVMRSSGQSNFGQDVRIAERFL-NTFPTSKHRPTMEKFLTEFYLSNTDYATSL 414 Query: 312 KRALRLEEINKESVESLVIV----SKIALEMGSIDQAHAKAMLAMKIAPRKEIF-----L 362 RL++ E+ V + AL G QA A+ ++ L Sbjct: 415 VSIRRLKKTTPAIDEARQYVLNHLALDALSQGKFSQATRYIEDALDKQAVSSLYKGESLL 474 Query: 363 LLAQIEQANSHNTDKIL 379 + A I +A I Sbjct: 475 IQADILRAQGDYAGSIR 491 >gi|193787406|dbj|BAG52612.1| unnamed protein product [Homo sapiens] Length = 447 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 17/138 (12%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + G ++Y +AL +V + Y +A+ L + + Sbjct: 192 LALKLQDEGQEAEGEKYIEEALANMSSQTYVFRYAAKFYRRKGSVDKALELLKKALQETP 251 Query: 220 EW---NRNRAILLIARSLENAD--KGDMIASYHDAIE------------SLKLCDNSIMA 262 + + A+ ++ + KG + ++ +++ +A Sbjct: 252 TSVLLHHQIGLCYKAQMIQIKEATKGQPRGQNREKLDKMIRSAIFHFESAVEKKPTFEVA 311 Query: 263 SICAAKSLISQNKKRKAE 280 + A+ I RKAE Sbjct: 312 HLDLARMYIEAGNHRKAE 329 >gi|162455564|ref|YP_001617931.1| hypothetical protein sce7282 [Sorangium cellulosum 'So ce 56'] gi|161166146|emb|CAN97451.1| hypothetical protein sce7282 [Sorangium cellulosum 'So ce 56'] Length = 453 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 67/231 (29%), Gaps = 22/231 (9%) Query: 82 DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYN 137 D+ +AL + + H+++ + + L ALA Sbjct: 66 DREIEALSRRIAKAPGGADLWSALGHAWLRKARASGDPSLYGRAHACAEVGLALAAEDRA 125 Query: 138 ----------------IAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 A + E +L A+ +L + +G A A + + Sbjct: 126 SLNLLGLVLIHERRFTEARDAAERVLSRDEGDALALGTLSDAALALGAFQVAAHAAQRMV 185 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKG 240 D P P A L + + A + A L ++ +G Sbjct: 186 DQRPGLPSYARAA-HLRWLQGDAATAKRIIRLAIDAGDPGEPEALAWTLTQAAMMFWHEG 244 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 D + +L A A+ +++ +A +LE+ + +P Sbjct: 245 DNEGADLGFERALAAQAGYPPALAGRARVALARGAWGRAVELLEQAHQQSP 295 >gi|119513703|ref|ZP_01632700.1| hypothetical protein N9414_07524 [Nodularia spumigena CCY9414] gi|119461639|gb|EAW42679.1| hypothetical protein N9414_07524 [Nodularia spumigena CCY9414] Length = 161 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 4/119 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G+ A +A+ ++P K+ + A+ NQ + AI Sbjct: 22 GENQRAIADYNQAIRLAPRYAEAYNNRGNARAAQKDNNGALDDYNQAIS----LDSRYAI 77 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 R A +GD + D ++++L A + +Q + A LE+ Sbjct: 78 AYNNRGNARAAQGDRQEAIADYNQAIRLNSTFGPAYNNRGNARAAQGDREGALQDLERA 136 >gi|328953610|ref|YP_004370944.1| Cold-shock protein DNA-binding protein [Desulfobacca acetoxidans DSM 11109] gi|328453934|gb|AEB09763.1| Cold-shock protein DNA-binding protein [Desulfobacca acetoxidans DSM 11109] Length = 1568 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 61/176 (34%), Gaps = 37/176 (21%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD-LNSAQR-YA-------- 177 + L E+ + A + L E+ + GD SA + A Sbjct: 499 RAQLIEKDLDKAVQ------------------LLREAIKRGDNTESAVKDLASVLVQQGK 540 Query: 178 -TKALDISPDAPWVT-------EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 +A+ V+ ++ Y A ++ AIT L +K K A RA L Sbjct: 541 PEEAIKTLESHKQVSSDPKSIDNLLITSYQNAGQYDHAITLLQKKLKQADN-EIKRAPYL 599 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L N KGD S + L +++ A L Q +A+ +L+K Sbjct: 600 FQIALMNLKKGDYGQSEQFFRKILTKQPDNVTVQRNIAICLSKQGHYDEAKKLLQK 655 >gi|282879056|ref|ZP_06287816.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] gi|281298790|gb|EFA91199.1| tetratricopeptide repeat protein [Prevotella buccalis ATCC 35310] Length = 535 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 14/176 (7%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A E E + + A+ +L + + GD A RY +AL ++P AP Sbjct: 344 ATLEDNMAKKEEIYKRTAEYYDKDYRALNNLATLAFKKGDEMEATRYLERALRVNPQAPE 403 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI----ARSLENADKGDMIAS 245 + ++ A T + + ++ L A++ ++ + + ++ Sbjct: 404 ALANLGIMELVNGNVKEAETSIAKALGEQNVNVAIGSLNLAKGNFAQAEKDFEDVNSNSA 463 Query: 246 YHD-------AIESLKLCDNSIMASI---CAAKSLISQNKKRKAEVILEKIWKVNP 291 A + L + ++ A + K AE L++ K +P Sbjct: 464 ALAQLMNKNYAAAAATLDKVANPNALTDYLHAIVAARRGNKFAAESYLKEALKKDP 519 >gi|297724923|ref|NP_001174825.1| Os06g0523800 [Oryza sativa Japonica Group] gi|255677105|dbj|BAH93553.1| Os06g0523800 [Oryza sativa Japonica Group] Length = 699 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 87/281 (30%), Gaps = 29/281 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--IAHEKLE-MMLQIPATRE 154 + AR+++ +E+ L ER A + + ++P + Sbjct: 240 GEVERARRVYERA-ADLLADDEHAEVLFVAFAEFEERCREVERARAVYKYALDRVPKGQA 298 Query: 155 FAVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 +Y + + GD + + +P ++ Sbjct: 299 EELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKD 358 Query: 206 RAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD-- 257 R + N R L I +L E D DM + E LKL Sbjct: 359 RIREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELDAKDMERTREVYSECLKLIPHK 418 Query: 258 --NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + AA+ I Q + A IL + P +I Y + E +G +R Sbjct: 419 KLTFSKMWLMAAQFEIRQKNLKAARRILGNAIGMAPKGKIFKKYIEI--ELYLGNFERCR 476 Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L E + + + + +++ +G D+A + LA+ Sbjct: 477 TLYEKYIEWSPANCYAWMKYAELEKSLGETDRARSIYELAI 517 >gi|206559199|ref|YP_002229960.1| hypothetical protein BCAL0804 [Burkholderia cenocepacia J2315] gi|198035237|emb|CAR51111.1| putative membrane protein [Burkholderia cenocepacia J2315] Length = 607 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 84/223 (37%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A D A +A++ V + + L KN + NR A L IAR Sbjct: 169 ARELARATGDTRGPAILALQALL---VRGPDRVGGLAVLKDMLKN--DMNRPEAQLAIAR 223 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 D D + ++L++ + + A++ L +A I V + Sbjct: 224 QQLAVDDKD--GAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIASFEKYVQQN 277 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D+A Sbjct: 278 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDEATGY 337 Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LAQI +++ + W Sbjct: 338 LKQYVQLGDKQPNLDVGQGYIYLAQIAIDQNND-AQASQWLDK 379 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 10/154 (6%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A +L D +++ + + +S AS A L+ K Sbjct: 105 ARDTRDPRMAQRATEIALGAQSPADALSAANLWRQ---YAPDSNRASQVDAALLVLAGKP 161 Query: 277 RKAEVILEKIWKVN------PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 A+ +L + P +A + + VG L + + + E+ + Sbjct: 162 ADAQPMLARELARATGDTRGPA-ILALQALLVRGPDRVGGLAVLKDMLKNDMNRPEAQLA 220 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 +++ L + D A A++I P L+ Sbjct: 221 IARQQLAVDDKDGAAQSLKQALQIRPDYLPAALM 254 >gi|297183881|gb|ADI20003.1| FOG: tpr repeat-protein [uncultured gamma proteobacterium EB000_65A11] Length = 472 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 80/202 (39%), Gaps = 12/202 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R GD+ +A + + ++P + + Y+ +++A K + N Sbjct: 3 AHRRGDIKAAIPEYLRVISLAPTNSVAIQLLGACYLQINRFAQARESFEAAIK--LDANY 60 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A +AR + + D+ A+ + + L ++ A L ++ + ++E + Sbjct: 61 GDAFHNLARL--DEAEHDLDAAEKNYRRAHALVPSNADTVFSLANVLKAKGELAESEQLY 118 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI--VSKIAL 336 K +++P H ++A + HL ++ + ++ + + + + + K Sbjct: 119 RKTIELSPSYAPAHRQLARLIDHLSVDDDIQAMEALIA-APSTPSNAKMHLAFGLGKCFE 177 Query: 337 EMGSIDQAHAKAMLAMKIAPRK 358 ++G ++A A ++ + Sbjct: 178 DLGLFERAMTYFNSANRLMRDQ 199 >gi|261331352|emb|CBH14346.1| tetratricopeptide repeat protein, predicted [Trypanosoma brucei gambiense DAL972] Length = 1362 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 93/287 (32%), Gaps = 36/287 (12%) Query: 97 AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATRE 154 + N+ A+ M + + +H + +LL QI ++A + LE + ++ Sbjct: 519 SGNLNKAQAMITTNIRHEHAIPD---AFLLSAQICQYVGNVSLASQALEQALTLDFEVKD 575 Query: 155 FAVYSLY---------FESCRIGDLNSAQ-------RYATKALDISPDAPWVTEAVV--- 195 +Y+L + L A K + P + ++ Sbjct: 576 QPLYNLLYGSVLGMMNKHKEALEALQEALKVVKDKSHVTAKGRLVQPLSVQDHVSLYLLI 635 Query: 196 -QQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Q ++ + A + R + A A + D+ + + Sbjct: 636 AQTHLKLHDAEEARATVAEATALFKDTAQAGRVAIASAM---IAARTDVDRALEILRQVP 692 Query: 254 KLCDNSIMASICAAKSLI--SQNKKRKA---EVILEKIWKVNPHPEIANIYTHLLSENTV 308 D I A A + QN++ A E ++E++ + + YT++ + Sbjct: 693 PRSDFFIAAKTRMANIYLIHRQNRQMYAECFEQLVEEVATAQSYIALGEAYTNI--QEPE 750 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + + I+ ++ + V++ + + +A A+ Sbjct: 751 KSISAYEKAKAIDPDNSDLAVLIGRALVSTHDYQRAIRYYRDAVASD 797 >gi|255601934|ref|XP_002537778.1| conserved hypothetical protein [Ricinus communis] gi|223515103|gb|EEF24606.1| conserved hypothetical protein [Ricinus communis] Length = 215 Score = 41.5 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 26/183 (14%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESC-RIGD---- 169 E LV E Q+ A+ +Y A K + ++ + L S GD Sbjct: 31 EPLVQ--EAQVLTAQGKYRDAVSKYQEATKLDPASSMPLSGAAFVLMKSSQIAQGDAAGR 88 Query: 170 -LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 ++ A +AL + D P E + L + +A Sbjct: 89 LRQQSESLARQALVLGADDPMAQEV--------------LRNLLDDRPPPLHVPNQQAWK 134 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++ + E+ +L A + A Q K +AE + K + Sbjct: 135 VMQEGEVLFQSNKPDEARVKYEEAARLDPQYSSAVVNAGDCYFVQKKWPEAEALFRKATE 194 Query: 289 VNP 291 + P Sbjct: 195 IEP 197 >gi|320590682|gb|EFX03125.1| 20S cyclosome subunit [Grosmannia clavigera kw1407] Length = 885 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 98/299 (32%), Gaps = 14/299 (4%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L +G +++A A S + + H ++ V + Y A + Sbjct: 560 LGSGYLALAQFQCSEALVAFSSLPRAH--NDTPWVQAQMGRAQYELAAYAEAETCFRRVR 617 Query: 148 QIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 + TR VYS + S A + +D + + A+ + LA++ Sbjct: 618 VLAPTRLDDMEVYSTILWFLKRETDLS--FLAHELVDAAWTSAQAWCALGNAWSLAQDHE 675 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 +A+ + + ++ A + E+ + + +++ A Sbjct: 676 QALRCFRRATQLKPKF----AYAYTLQGHEHVLNEEYDKALTAYRQAVAADRRHYNAYYG 731 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK---LKRALRLEEINK 322 + KA ++P + + E L+ ++ ++ Sbjct: 732 IGRVYEKLGNFDKAYEHYHIASVIHPTNAVLICCIGKVLERQKQIVPALQYFIKATDLAP 791 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILY 380 + ++ ++ L +G + A + M+ IAP + LL ++ + + + + + Sbjct: 792 RAAQTRFRKARALLALGQLQAAQQELMILKDIAPDEAAVHFLLGKLYKTLNDKSAAVRH 850 >gi|317477616|ref|ZP_07936834.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] gi|316906221|gb|EFV27957.1| tetratricopeptide [Bacteroides eggerthii 1_2_48FAA] Length = 283 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 32/189 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 LA+ +S V + E L L+ I + +R+Y +A E +L++ Sbjct: 108 GRNNLAQADYSLVLDLEKNNEEAL--LMRAYIYMQQREYKMAKADYERLLKVNPASYNGR 165 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + G A R K K+ Sbjct: 166 LGLATLEQKEGKHEDALRILNNMFA------------------------------AKGKD 195 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A+ A+L +AR+ D M + D E+++L + + + ++Q KK Sbjct: 196 AQLSPSQYAMLYVARAGVEKDLKHMDMALVDLEEAIRLDSSQPDIYLMRGEIYLAQKKKD 255 Query: 278 KAEVILEKI 286 A+ EK Sbjct: 256 LAKRDFEKA 264 >gi|307261203|ref|ZP_07542878.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868934|gb|EFN00736.1| hypothetical protein appser12_7670 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 391 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 83/271 (30%), Gaps = 30/271 (11%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A M+L P Sbjct: 84 GEVDRALRIHQALDASPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYIMLLDEPEFAVN 143 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDI----------SPDAPWVTEAVVQQYVLAKEWS 205 ++ L + + A A K + I + + ++ Sbjct: 144 SLTQLMTVYQKTKEWKKAINVAEKLIKIESDTDKIPLSHYYCEYAQA------IKNEDLD 197 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 ++ L++ + + + R +L +N + + + L+ + I I Sbjct: 198 GHLSALSKALEYSPQCARASILLGDYYLAQNQFQS----ALKNYERILQQDPDFISEVIE 253 Query: 266 AAKS-LISQNKKRKAEVILEKIWKVNPHP---EIANI-YTHLLSENTVGKLKRALRLEEI 320 K+ +++N E+ L + ++ H ++A Y K +L + Sbjct: 254 KIKACYMAENDLANYELFLIRANQIK-HNSSVDLALAEYIEQKDGVVAAHSKLYQQLSQY 312 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 I + + +A ML Sbjct: 313 PSMITFHRFIHYQ--INEAEEGRAKESLMLL 341 >gi|288959495|ref|YP_003449836.1| TPR domain protein [Azospirillum sp. B510] gi|288911803|dbj|BAI73292.1| TPR domain protein [Azospirillum sp. B510] Length = 588 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 6/143 (4%) Query: 153 REFAVYSLYFESCRIGDL-NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 R ++ + + + A ALD+ AP + + E A Sbjct: 143 RLPELHGNLGNALKAQSRLDEAADCFRAALDLRAQAPEMHHFLAATLRELGELEEAERHF 202 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 A ++ + + + + G + + + L + A + A L Sbjct: 203 RIALDQAPDY----LDVHYSLAELLSTGGRLEEAEAEFRVVLAAAPRFVPAQVGLAHVLQ 258 Query: 272 SQNKKRKAEVILEKIWKVNP-HP 293 S ++ +A ++E + P HP Sbjct: 259 SLDRAGEAIEVIESAREQAPDHP 281 >gi|256017302|ref|ZP_05431167.1| hypothetical protein ShiD9_00205 [Shigella sp. D9] gi|323944606|gb|EGB40674.1| tetratricopeptide [Escherichia coli H120] Length = 1093 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|227887581|ref|ZP_04005386.1| tetratricopeptide repeat protein [Escherichia coli 83972] gi|300982249|ref|ZP_07175960.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|301047184|ref|ZP_07194276.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|227835931|gb|EEJ46397.1| tetratricopeptide repeat protein [Escherichia coli 83972] gi|300300861|gb|EFJ57246.1| tetratricopeptide repeat protein [Escherichia coli MS 185-1] gi|300408803|gb|EFJ92341.1| tetratricopeptide repeat protein [Escherichia coli MS 45-1] gi|307554567|gb|ADN47342.1| tetratricopeptide repeat protein [Escherichia coli ABU 83972] gi|315292479|gb|EFU51831.1| tetratricopeptide repeat protein [Escherichia coli MS 153-1] Length = 1093 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|215487893|ref|YP_002330324.1| hypothetical protein E2348C_2826 [Escherichia coli O127:H6 str. E2348/69] gi|312965463|ref|ZP_07779695.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75] gi|215265965|emb|CAS10374.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] gi|312289883|gb|EFR17771.1| tetratricopeptide repeat family protein [Escherichia coli 2362-75] Length = 1093 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|260811293|ref|XP_002600357.1| hypothetical protein BRAFLDRAFT_66590 [Branchiostoma floridae] gi|229285643|gb|EEN56369.1| hypothetical protein BRAFLDRAFT_66590 [Branchiostoma floridae] Length = 1567 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 78/257 (30%), Gaps = 48/257 (18%) Query: 151 ATREFAVYSLYFESCRIGDLNSAQ------RYATKAL----DISPDAPWVTEAVVQQYVL 200 +T+ + L +GD A A +AL P+ + Sbjct: 871 STKATLLQHLGKAWQNLGDHTKALFYFDLSHVAFQALHHPITEHPNIATSRNFMGTSCCN 930 Query: 201 AKEWSRAITFLNQKKKNAK------EWNRNRAILLIARSLENADKGDMIASY---HDAIE 251 + AI++L + K N + ++ L L GD + A+E Sbjct: 931 LGNYKEAISYLTEALNMLKNFYGHNTANDHISVALNCLGLTFEKLGDYKKALGYFEQALE 990 Query: 252 SLKL---CDNSIMASIC--AAKSLISQNKKRKAEVILEKIW--------KVNPHPEIA-- 296 + + +A++ A L + + +KA +E+ + H +IA Sbjct: 991 MTRRIHRSPHREIATLLNNIALVLKEKGEIKKAISCIEEALDMRKRLFGENTAHLDIANS 1050 Query: 297 -----NIYTHLLSENTV-----GKLKRALRLEEINKESVESLVIVSKIALEMG--SIDQA 344 + Y L LK + E ++ + + + + QA Sbjct: 1051 LNALGSTYHELRDGQKAVFYKKQALKMFRVIYGETAVHPEIADVLVNLGISLNYINDPQA 1110 Query: 345 HAKAMLAMKIAPRKEIF 361 +++ + I+ Sbjct: 1111 MTYGEQGLEM--TRRIY 1125 >gi|163784399|ref|ZP_02179288.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1] gi|159880330|gb|EDP73945.1| hypothetical protein HG1285_04998 [Hydrogenivirga sp. 128-5-R1-1] Length = 202 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 2/121 (1%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 ++G+L+ AQ Y KA+ +P+ + K++ A + + KN N+ + Sbjct: 80 KVGELDKAQEYFLKAIQTNPEKAESYVNLGILLAKKKDYGSAKNYFKKAIKNPNYKNKEK 139 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A +L G++ +++ + + A + Q+K +A+ + EK Sbjct: 140 AY--YNLALVYLKLGNLKRYEESLKKAIAYNNFFLPAYEELGNYYMQQDKYDQAKRLYEK 197 Query: 286 I 286 Sbjct: 198 A 198 >gi|74316402|ref|YP_314142.1| TPR repeat-containing protein [Thiobacillus denitrificans ATCC 25259] gi|74055897|gb|AAZ96337.1| hypothetical protein containing TPR repeat [Thiobacillus denitrificans ATCC 25259] Length = 592 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 73/278 (26%), Gaps = 10/278 (3%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 E L+ L ++A IA + + A + + D A Sbjct: 73 ELLLKFLVAEVAGQRGAIGIAQTTYLDLARQTRDPRVAQRAAEVSAFAR-DPAGALEATR 131 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + D+ + + + + A L + L +A ++ Sbjct: 132 LWAEADKDSLRAQQTLAALLLSEGRLAEAEPVLRALLQEKPA----EGFLHLAAAIGKMR 187 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP--HPEIA 296 D A+ A A++ S + A L+K + P P Sbjct: 188 --DSAAALELVRRLAADHPQLPEAQFAIAQAAASAGQFDTALAALQKADSLRPGWEPGAL 245 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L + L + ++ E + ++ + +A A+ + P Sbjct: 246 LHAQILARTSNAAALAFMRTFLAEHGDAREVRLAYARTLVSANQFTEARAEFARLTRDFP 305 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALH-AMPDPL 393 R L A + + D L DP Sbjct: 306 RNAEVSLAAGLLSLQLGDLDAAHALLTQTLEYNPRDPD 343 >gi|46581341|ref|YP_012149.1| TPR domain/response regulator receiver domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601481|ref|YP_965881.1| response regulator receiver [Desulfovibrio vulgaris DP4] gi|46450763|gb|AAS97409.1| TPR domain protein/response regulator receiver domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120561710|gb|ABM27454.1| response regulator receiver [Desulfovibrio vulgaris DP4] gi|311235000|gb|ADP87854.1| response regulator receiver [Desulfovibrio vulgaris RCH1] Length = 451 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 16/248 (6%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 YL+ + + + A E E + + L +G+ RY + Sbjct: 193 YLVMGEAYQHLGKLDKARECYEEASRNAELYLEPLRRLADIHGEMGEPTEQLRYLERLDQ 252 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +SP + ++ +A + + A + + R + D Sbjct: 253 LSPLNVERKVDMGAIHLELGNQEKADELFDTAVQQATREALSYIADISGRIAGIYNGRDP 312 Query: 243 IASYHDAIESLKLCDNSIMASIC-----AAKSLISQNKKRKAEVILEKIWKVNPHPE--- 294 + H +L + + AS +L Q K ++A K +V P E Sbjct: 313 QRAEHFLRRALDAKGDMLDASDLDTFNRLGIALRRQGKWQEALTEYHKALRVAPEDENLF 372 Query: 295 --IANIYTHLLSENTVGKLKRALRLEEINKE----SVESLVIVSKIALEMGSIDQAHAKA 348 + + + L IN E + + + G + A Sbjct: 373 YNMGMACAEGR-DFREARANMLKALT-INPELPRRDPVMAYNIGLVFMRAGGREYAERCL 430 Query: 349 MLAMKIAP 356 +A+++ P Sbjct: 431 NIALELDP 438 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 13/173 (7%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 LI ++ E + + L+L S + ++ K KA E+ + Sbjct: 159 LIDQAREFVHQNLPEQGIKLCRQILELKPGSAAGYLVMGEAYQHLGKLDKARECYEEASR 218 Query: 289 VN-----PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 P +A+I H +L+ RL++++ +VE V + I LE+G+ ++ Sbjct: 219 NAELYLEPLRRLADI--HGEMGEPTEQLRYLERLDQLSPLNVERKVDMGAIHLELGNQEK 276 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQA-----NSHNTDKILYWTQSALHAMPD 391 A A++ A R+ +A I N + + ++ + AL A D Sbjct: 277 ADELFDTAVQQATRE-ALSYIADISGRIAGIYNGRDPQRAEHFLRRALDAKGD 328 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 54/183 (29%), Gaps = 15/183 (8%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAER--QYNIAHEKLEM- 145 G + + N A ++ QQ T E L Y+ + +IA A L Sbjct: 265 GAIHLELGNQEKADELFDTAVQQAT--REALSYIADISGRIAGIYNGRDPQRAEHFLRRA 322 Query: 146 ------MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 ML F + R G A KAL ++P+ + + Sbjct: 323 LDAKGDMLDASDLDTFNRLGIAL--RRQGKWQEALTEYHKALRVAPEDENLFYNMGMACA 380 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 +++ A + + E R ++ L G + +L+L Sbjct: 381 EGRDFREARANMLKALTINPELPRRDPVMAYNIGLVFMRAGGREYAERCLNIALELDPGF 440 Query: 260 IMA 262 A Sbjct: 441 TKA 443 >gi|191168879|ref|ZP_03030651.1| tetratricopeptide repeat protein [Escherichia coli B7A] gi|293446903|ref|ZP_06663325.1| yphG protein [Escherichia coli B088] gi|309794403|ref|ZP_07688826.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|331669297|ref|ZP_08370145.1| putative tetratricopeptide repeat protein [Escherichia coli TA271] gi|331678542|ref|ZP_08379217.1| putative tetratricopeptide repeat protein [Escherichia coli H591] gi|190901085|gb|EDV60862.1| tetratricopeptide repeat protein [Escherichia coli B7A] gi|291323733|gb|EFE63161.1| yphG protein [Escherichia coli B088] gi|308121859|gb|EFO59121.1| tetratricopeptide repeat protein [Escherichia coli MS 145-7] gi|331064491|gb|EGI36402.1| putative tetratricopeptide repeat protein [Escherichia coli TA271] gi|331075002|gb|EGI46322.1| putative tetratricopeptide repeat protein [Escherichia coli H591] Length = 1093 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|300817680|ref|ZP_07097895.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] gi|300529668|gb|EFK50730.1| tetratricopeptide repeat protein [Escherichia coli MS 107-1] Length = 1093 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|302307823|ref|NP_984579.2| AEL281Cp [Ashbya gossypii ATCC 10895] gi|299789186|gb|AAS52403.2| AEL281Cp [Ashbya gossypii ATCC 10895] Length = 1390 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 3/118 (2%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + E + L+I ++ A L G + ++ + +AL++SP+ + + Sbjct: 677 AESIEWFQSALRIDSSDVEAWIGLGQAYAACGRIEASIKVFERALELSPEHKYAGLFLAI 736 Query: 197 QYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 E+ +++ L + K + + L+ +L+ D+G +I + A E Sbjct: 737 SLCQLSEFEKSLEALRKLVNKYPQEAIFKERLSATLVEHALQFFDQGYLIKAATCAAE 794 >gi|297530018|ref|YP_003671293.1| hypothetical protein GC56T3_1717 [Geobacillus sp. C56-T3] gi|297253270|gb|ADI26716.1| TPR repeat-containing protein [Geobacillus sp. C56-T3] Length = 1385 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 91/298 (30%), Gaps = 25/298 (8%) Query: 105 KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVY-SLYF 162 K + + L + L +IA +Y A LQ P E Y L Sbjct: 545 KAEDVLKRVKGKAQSPLYHYLRGRIAFFASRYEEAARYFRTSLQLDPDQPEVWSYFGLA- 603 Query: 163 ESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 S G + + A+ + P V+ +V ++ A + ++ + Sbjct: 604 -SAYAGHIEKGLISSRVAVSLYPGDLFIETNHGVLLFHVKR--FAEARAWFDRLVRR--- 657 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R A L R+ + + G + + L + A + KA+ Sbjct: 658 -ERRDAQLWYERARCDRELGRRRKAERGFCVAKALDPQEPYPYLMLADLYDDDGDREKAK 716 Query: 281 VILEK----IWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 +LE+ W++ P + + ++Y + + + + V + + ++ Sbjct: 717 AVLEEGLAVAWRLAPLYVRLGDLY--MEEGEAEQAVSCYEEAIRHDSDDVFAHLGLAAAL 774 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ---IEQA---NSHNTDKILYWTQSALH 387 E G ++ A + + L A I + L W + L Sbjct: 775 AERGDVEAARRYVIKQHTRFANNSEYWLNAGKWLIAHGFADEEEGRETALSWLEEGLR 832 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 75/205 (36%), Gaps = 15/205 (7%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L ++ + ++ A ++ E L+ + + L G+ + + Sbjct: 905 PLSLFRLAELCASLGRHEEAKQQYETCLKADPSFVLCHFRLAALYEAEGNEERQHTHLLQ 964 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A+ ++P ++Q E S + L + +A E ++ + +L D+ Sbjct: 965 AVRLAPK-----RVDMEQLAAIAEPSALLRALADARPHAGEAWYYDSLGYVYGALGRRDQ 1019 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IA 296 ++L L + A L+ + ++++A +LE++ HP+ + Sbjct: 1020 EKA-----AVEKALALDPDHHEVLRHWAMVLMGEGRQKEAVKLLEQLMVR--HPDDEPLY 1072 Query: 297 NIYTHLLSENTVGKLKRALRLEEIN 321 +Y L + G K RLE + Sbjct: 1073 PLYVALFPKTMRGLGKLRHRLERLK 1097 >gi|282880691|ref|ZP_06289393.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] gi|281305417|gb|EFA97475.1| tetratricopeptide repeat protein [Prevotella timonensis CRIS 5C-B1] Length = 473 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 83/240 (34%), Gaps = 23/240 (9%) Query: 137 NIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + E++ +E L GD ++R K +D +P + + Sbjct: 155 MKAEDWFELLKSKTDDDCQELKGRILLGL----GDYEESERIFQKLIDKNPYSVDYWTDL 210 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + +S AIT ++ +I ++ + G+ + + + Sbjct: 211 ASLQAINDRFSDAITSCEYAIAINP----KNSLAIIIKANSLFNLGNFEEALKYYLAYQQ 266 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE-IANIYTHL--------LS 304 L N + S + ++ KA L++ + N PE +A IY ++ Sbjct: 267 LDPNDVTIDGLIGVSYLQLDQPAKALAHLKRAEQQNQVTPESLAEIYENIALTLSHLGKM 326 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + + + + LE ++ E + + I LE ++ A A++ P + L Sbjct: 327 DEALSYVDKMQNLECMDMEDI--KLTKGHILLENDQVEAAQEIFQEAIRQ-PNASTYTAL 383 >gi|226226814|ref|YP_002760920.1| hypothetical protein GAU_1408 [Gemmatimonas aurantiaca T-27] gi|226090005|dbj|BAH38450.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 918 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 35/256 (13%) Query: 146 MLQIPATRE----FAV----YSLYFESCRI-------GDLNSAQRYATKALDISPDAPWV 190 M+ P + + E+ G+ ++A LD+ Sbjct: 267 MVVDPDGALARYGLGLAFRQRGYFREARAEFERAIVHGEDERLVQHALAELDLIDGNSAG 326 Query: 191 TEAVVQQYVLAKE----WSR---AITFLNQKKKNAKEWNR------NRAILLIARSLENA 237 +A + + +E W+ A+ A + R A+ + A Sbjct: 327 AQARYEHLLAEQESARWWNEHGVALHQGGNVASAADSYRRALRIDPRDALAYNNLGVALA 386 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D+GD A+ S +L + A A L + A +L + V HP A Sbjct: 387 DRGDTNAAREALTRSAELDPTFVRARRNLACLLSWNGEGLAALDLLRE--LVEFHPRDAE 444 Query: 298 IYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + E + + ++ E++ E+ ++ + +G D A + A+ Sbjct: 445 AWHAIGLVFVSLERLIDAREAFVKAIELHARHAEARFALADVLDRLGDQDGAARETEQAL 504 Query: 353 KIAPRKEIFLLLAQIE 368 I+P + L IE Sbjct: 505 VISPVRADARLTVGIE 520 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 49/197 (24%), Gaps = 9/197 (4%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN----EYLVYLLEVQIALAERQYNIAHEK 142 AL + + A + S + L++ +A Sbjct: 654 ALTAASLGDGSGETADADRHASRHTLLRLLKQDVMSPALLHFAGDVSLQIA-DRTLALGF 712 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 L R ++ GDL +A+ AL ++P + + + A Sbjct: 713 YRRALSRDPMRPTPRVAIARLLREQGDLLAARLEIVAALAVAPGWREARLELARLHRDAA 772 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 A L + I L + + + L+ + A Sbjct: 773 RLDEARLVLVTCLADVPT----DLIALELLAGVLVAEERDDDARVVVDRLLRHDPSRSAA 828 Query: 263 SICAAKSLISQNKKRKA 279 L Q + R A Sbjct: 829 LWFDGVLLARQARMRDA 845 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 45/158 (28%), Gaps = 4/158 (2%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 +A SY + L Y N A E L ++ T A + Sbjct: 355 GNVASAADSYRRALRIDPRDALAYNNLGVALADRGDTNAAREALTRSAELDPTFVRARRN 414 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G+ +A + ++ P A+ +V + A + Sbjct: 415 LACLLSWNGEGLAALDLLRELVEFHPRDAEAWHAIGLVFVSLERLIDAREAFVKAI---- 470 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 E + A A + GD + + ++L + Sbjct: 471 ELHARHAEARFALADVLDRLGDQDGAARETEQALVISP 508 >gi|255578208|ref|XP_002529972.1| zinc finger protein, putative [Ricinus communis] gi|223530534|gb|EEF32415.1| zinc finger protein, putative [Ricinus communis] Length = 223 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 7/87 (8%) Query: 2 LRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYR---TSPFVILSILYFFLFAWILL 58 L+++ Y + L++ + +S+Y V ITWG +L R S I+ F + +LL Sbjct: 12 LKVLGYLMI--LLVAGIVALSYYA-VVIITWGPQLLRGGGHSFLAFSLIILFHILLVMLL 68 Query: 59 FAVSRFFLSCPAML-FHMLHKRNYDKG 84 ++ R P + + + G Sbjct: 69 WSYFRVVFKDPGSVPENWRQENLEGGG 95 >gi|218463823|ref|ZP_03503914.1| probable adenylate cyclase protein [Rhizobium etli Kim 5] Length = 590 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 72/202 (35%), Gaps = 24/202 (11%) Query: 173 AQRYATKALDISPDAPWVTEAV-----VQQYVLAKEWSRA----ITFLNQKKKNAKEWNR 223 A++ +A+++ P+ + + WS + I + A + Sbjct: 364 ARKLLQRAVELDPNFASAHAFLALTHGLDYL---NRWSESPQRSIEQAEEAATLAVARDD 420 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + A S+ ++ +A ++ L N + ++LI + +A Sbjct: 421 SDPVAHWALSVVKLYTRQHDSAISEAARAIVLNPNFAEGQVSLGEALIYSGRSGEALAYF 480 Query: 284 EKIWKVNPH-PE-------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 ++ +NP+ P+ +A E L+R R N + S +++ Sbjct: 481 DRARVLNPYFPDVVLHFQALALFQLRRYEEAVEPLLQRVNR----NPVTDVSRALLAACY 536 Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357 +G ++A A+ +++ P Sbjct: 537 GHLGRFEEARARWQEVLRVNPD 558 >gi|182438044|ref|YP_001825763.1| hypothetical protein SGR_4251 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778687|ref|ZP_08237952.1| Tetratricopeptide TPR_2 repeat-containing protein [Streptomyces cf. griseus XylebKG-1] gi|117676062|dbj|BAF36653.1| hypothetical protein [Streptomyces griseus] gi|178466560|dbj|BAG21080.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659020|gb|EGE43866.1| Tetratricopeptide TPR_2 repeat-containing protein [Streptomyces cf. griseus XylebKG-1] Length = 801 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 82/266 (30%), Gaps = 13/266 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 P A + T + ++ + + A + + E A Sbjct: 528 GPRPTAALGLLLTRAELTDTDRAAALVVRAWDRFRAGELDAALSDHGRAIAVDPRSERAH 587 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +G A +A +I+P W + Y + A+T L++ Sbjct: 588 QGRAVILRSLGRHEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLAEALTVLDRA--- 644 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + A+ L +R L G + D ++ L A + ++ Sbjct: 645 -HALDPSDAVPLGSRGLVRHALGRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPV 703 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHL-LSENTVGKLKRALRLEEINKESVESLVIV 331 A L++ +++P E +Y V RAL L + + + Sbjct: 704 GALADLDRAEELSPGQAGTEGERGEVYRATDRPGEAVACYDRALAL---DPDYAWAYGSR 760 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 + +G + +A A A+++ P Sbjct: 761 ALALEALGRVPEALADLDRALELDPD 786 >gi|94971629|ref|YP_593677.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94553679|gb|ABF43603.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 722 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 78/229 (34%), Gaps = 23/229 (10%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 ++ V YL L ++Q + +A E+ E ++++ T L Sbjct: 142 KRDPKNVDAHRLLGRIYLRSLGDMQSGNNQSRDMQRLAIEQYEEIVKLDPTSVEDHLLLG 201 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 DL A++ A+ I PD+ + Y + +A L + Sbjct: 202 RLYSYSNDLTKAEKEFKTAVQIQPDSEEAVTMLAYLYTQEGDTKKAQEVL-----SNIPD 256 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE- 280 + A L ++ D + +++ L ++ + A++L++ + A Sbjct: 257 DDRSAKLYSTLGYTYEEQKDYKKAIEAYRKAVMLDKENLDSVRGLAQNLLNDGQLDAALE 316 Query: 281 --VILEKIWKVNPHPEIANIYTHLLS--------ENTVGKLKRALRLEE 319 I+ V+ P A Y H+ E + LK+A L + Sbjct: 317 QYKII-----VDQDPSDAQSYQHIAEIDRRNGKFEAALDALKKASALVQ 360 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 37/263 (14%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 ++ Y A E + + +V L G L++A +D P Sbjct: 270 TYEEQKDYKKAIEAYRKAVMLDKENLDSVRGLAQNLLNDGQLDAALEQYKIIVDQDPSDA 329 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQK---KKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + + ++ A+ L + ++++E N A++ + D + I Sbjct: 330 QSYQHIAEIDRRNGKFEAALDALKKASALVQDSQEIPYNMAVIYEGQGR-YEDAINTIQQ 388 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LS 304 + + S S ++ ++ LE+ + NIY Sbjct: 389 LLTKTD----KPD---------ASYSSADRSNRSI-FLER---------LGNIYREANKP 425 Query: 305 ENTVGKLKRALRLEEINKESVESLVI--VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + V +R + L + S + + + A A A K P+ Sbjct: 426 QQAVETFRRMIALG----DDPASRAYQEMVETYRDNRDWPSATAAAQEGAKKLPKDRGLQ 481 Query: 363 LLAQIEQANSHNTDKILYWTQSA 385 L+ A + K A Sbjct: 482 LVLA---AQLADEGKADQALSIA 501 >gi|301022083|ref|ZP_07186010.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] gi|299881388|gb|EFI89599.1| tetratricopeptide repeat protein [Escherichia coli MS 196-1] Length = 1124 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 663 >gi|329663548|ref|NP_001192789.1| tetratricopeptide repeat protein 13 [Bos taurus] gi|297491376|ref|XP_002698831.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1 [Bos taurus] gi|296472256|gb|DAA14371.1| tetratricopeptide repeat domain 13 isoform 1 [Bos taurus] Length = 858 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 154 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 213 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 214 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 266 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 267 HEDFQQSLELNKN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 325 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 326 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNE 383 Query: 360 IFLLL 364 + + Sbjct: 384 VCQYM 388 >gi|83858829|ref|ZP_00952351.1| flagellin modification protein FlmG [Oceanicaulis alexandrii HTCC2633] gi|83853652|gb|EAP91504.1| flagellin modification protein FlmG [Oceanicaulis alexandrii HTCC2633] Length = 600 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 67/164 (40%), Gaps = 12/164 (7%) Query: 205 SRAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAI--ESLKLCDNS 259 A T + + K+ + +AI L+ R+++ D A+ + +++ + S Sbjct: 28 EAASTEVQRALSSAKSKDDNLPPKAIGLLKRAMKIVDDDRAAAAKAAKLCLDAVDIAPES 87 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRAL 315 +A+ A L + KA E+ W+ NPH + IY +L + + ++ L Sbjct: 88 SLANHALAICLERLGRLAKALQFYERAWQFNPHN--SEIYLNLAMLAWKLDMLPAAEKFL 145 Query: 316 RL-EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 RL ++ ++ +S + + G + + A+ P + Sbjct: 146 RLFVQMAPNHPAGVINLSGVLRDQGKFEDSIEILRAAIYANPEE 189 >gi|307944215|ref|ZP_07659556.1| putative tetratricopeptide repeat protein [Roseibium sp. TrichSKD4] gi|307772561|gb|EFO31781.1| putative tetratricopeptide repeat protein [Roseibium sp. TrichSKD4] Length = 263 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 4/111 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R+GD +A + A+KA ++P + A+ + Y ++ AI A E Sbjct: 81 LRLGDKTAAYKMASKATALAPKSSQSHIALGEVYAEQEKHDLAIQSYETALTYAPE---- 136 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 LL S + GD + E+L+ + A + AA QN+ Sbjct: 137 NVSLLAILSRHHRKLGDTAKADSMLSEALERDSQNPDALVEAASVEGWQNQ 187 >gi|196229070|ref|ZP_03127936.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] gi|196227351|gb|EDY21855.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428] Length = 508 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 12/184 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G L A+ + L +P A+ W AI L + + N Sbjct: 17 QQAGRLTEAETTYRQILTAAPHFLRAWVALGSTLSAMGRWPEAIKVLERTL----TLDPN 72 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 R + +A G + ++L L N A L+ Q++ +A + Sbjct: 73 RPEIHFNLGNNHAKSGQWEPAIASFRKALVLRPNCAQTCTNLAGVLLEQDRLDEAIAHFQ 132 Query: 285 KIWKVNP----HPEIANIYTH-LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + ++P H + YT E + +RAL L + + ++ + G Sbjct: 133 RALTLHPAAEMHYNLGVAYTRAARGEEAIACFRRALAL---RPDYANAHWALAPELMRRG 189 Query: 340 SIDQ 343 ++ Sbjct: 190 HYEE 193 >gi|160888700|ref|ZP_02069703.1| hypothetical protein BACUNI_01118 [Bacteroides uniformis ATCC 8492] gi|317479554|ref|ZP_07938682.1| tetratricopeptide [Bacteroides sp. 4_1_36] gi|156861599|gb|EDO55030.1| hypothetical protein BACUNI_01118 [Bacteroides uniformis ATCC 8492] gi|316904284|gb|EFV26110.1| tetratricopeptide [Bacteroides sp. 4_1_36] Length = 283 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 31/189 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 LAR +S V + + E L L+ I + +R YN A E +L++ Sbjct: 108 GKDDLARIDYSLVLDIESDNQEAL--LMRAYIYMRQRNYNFAKSDYERLLKLAPQSYNGR 165 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + G +A + + + Sbjct: 166 LGLATLEQKEGKYEAALSILNAMIA-----------------------------EKGGEA 196 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + A+L +AR+ D + + D E++KL + A + + +SQ KK Sbjct: 197 TRLTTQQYAVLYVARAGVEQDMKHVDLAMMDLEEAIKLDASQTEAYLIRGQIYLSQKKKE 256 Query: 278 KAEVILEKI 286 A+ EK Sbjct: 257 LAKRDFEKA 265 >gi|156936307|ref|YP_001440223.1| cellulose synthase subunit BcsC [Cronobacter sakazakii ATCC BAA-894] gi|156534561|gb|ABU79387.1| hypothetical protein ESA_04207 [Cronobacter sakazakii ATCC BAA-894] Length = 1167 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 9/159 (5%) Query: 104 RKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R + + + L A A + + +L E A L Sbjct: 584 RDSGQEAQAIALLRQQPVSDRIDLTLADWAQQRGDNATARAQYQTVLTRSPASEEARLGL 643 Query: 161 YFESCRIGDLNSAQ-RYAT---KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QK 214 GD +A+ + A A P +P + + +RA Sbjct: 644 AEVLIAQGDNAAAREQLAALQTPAAGGEPRSPGTQRRIANAEAALGDTARAQQAFAVLAA 703 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++ A++L + G + +++ Sbjct: 704 TAKTQPPSQESALVLRDAARFQRQNGQPQQALQTYRDAM 742 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 14/162 (8%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A L L + + GD +A+ L SP Sbjct: 579 TANRLRDSGQEAQAIALLRQQPVSDRIDLT----LADWAQQRGDNATARAQYQTVLTRSP 634 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSLENADKG 240 + + + + + + A L + A R I +L + + Sbjct: 635 ASEEARLGLAEVLIAQGDNAAAREQLAALQTPAAGGEPRSPGTQRRIANAEAALGDTARA 694 Query: 241 DMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKA 279 + A K S +++ AA+ + ++A Sbjct: 695 QQAFAVLAATA--KTQPPSQESALVLRDAARFQRQNGQPQQA 734 >gi|126725849|ref|ZP_01741691.1| hypothetical protein RB2150_06573 [Rhodobacterales bacterium HTCC2150] gi|126705053|gb|EBA04144.1| hypothetical protein RB2150_06573 [Rhodobacterales bacterium HTCC2150] Length = 650 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 30/244 (12%) Query: 160 LYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK---------EWSRAI 208 L + G + +A+ LD P + + + + + + I Sbjct: 7 LMLAKKMAKNGQIEAARDLFQSVLDKFPKNRRAIDGLKKLPANSGAGGSGIPKIQLNGLI 66 Query: 209 TFLN---------QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 N Q K ++ + R + + + + + +SL L S Sbjct: 67 QLFNDGNFQTVVKQALKLSQIYPREAPLFGLLGAS-FLRLNQHDEAVSNYEKSLNLNLTS 125 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRA 314 + +LI ++ +A L+ + NP H + Y + K Sbjct: 126 TELKVSLGYALIKADRAFEAIEKLKAVVDENPNFEHAHLNLGLAYKATIEFELAQ--KCF 183 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE--IFLLLAQIEQANS 372 ++ +IN +S + L ++ I ++ D A AM++APR+ + +E+A Sbjct: 184 EKVHQINPKSTDGLFNLANILAQIDDFDAADRTYEKAMELAPRRADIAYNRAHALERAGR 243 Query: 373 HNTD 376 + Sbjct: 244 YEAA 247 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 8/161 (4%) Query: 102 LARKMHSYVSQQHTFHNE----YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + + + +E +L A ++ +A + E + QI + Sbjct: 138 KADRAFEAIEKLKAVVDENPNFEHAHLNLGLAYKATIEFELAQKCFEKVHQINPKSTDGL 197 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++L +I D ++A R KA++++P + A + A+ F K Sbjct: 198 FNLANILAQIDDFDAADRTYEKAMELAPRRADIAYNRAHALERAGRYEAALEF----YKI 253 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + N N+A L ++ + +G+ + +L + + Sbjct: 254 SLNINPNQASALNNIAVIHKMQGNKKEARRSFESALTIAPD 294 >gi|62737789|gb|AAX98205.1| transcriptional regulator [Streptomyces aizunensis] Length = 998 Score = 41.5 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 13/130 (10%) Query: 165 CRIGDLNSAQRYATKALDISPDAPW------VTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 R G L A+R A +ALD P W A+++ + A L++ Sbjct: 679 LRRGHLVEARRLAEQALDQLPPHGWGVGIGMPLSALIEARTAMGDHEAAAELLDRPVPED 738 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC-------DNSIMASICAAKSLI 271 R+ L AR G A+ D +L + + A++ + Sbjct: 739 MLTTRHGLHYLYARGRHQLATGRHHAALTDFTACGELMRRWGMDRSTLVPWRVGVAEARL 798 Query: 272 SQNKKRKAEV 281 + + +AE Sbjct: 799 ALGSREEAER 808 >gi|332707755|ref|ZP_08427782.1| NB-ARC domain protein [Lyngbya majuscula 3L] gi|332353458|gb|EGJ32971.1| NB-ARC domain protein [Lyngbya majuscula 3L] Length = 1255 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 34/274 (12%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE-RQYNIAHEKLEMMLQIPATREFAV 157 + A H + ++ L L Q A N ++ + P Sbjct: 840 DAARALTDHKDRAHALSYLAPQLSENLLPQALEAARGITNESNRAHALSALAP------- 892 Query: 158 YSLYFESCRIGDLNSAQRY------ATKALDISPDAPWVTEAVVQQ----YVLAKEWSRA 207 + L +A+ A ++P P + ++ + W Sbjct: 893 ---HLPKILSEALEAARAITDPWNRANALCQLAPYLPEILPEALELIGAIRSKIQHWDSG 949 Query: 208 ITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKL-CDNSIMASI 264 IT LN+ K + + L++++LE A A+ + L + ++ Sbjct: 950 ITILNESGKASILRKLAPYLSKKLLSQALEVAQSIADDKDRVYALSEIALHLPEILPEAL 1009 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKE 323 A+S+ + + +A+ +++ P PEI + E T RA L E+ Sbjct: 1010 KVAQSI--THNQDRADALIKLA----PQMPEILPEALEMAREFT-DPWNRANALIELAPY 1062 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ESL + A +I +A +++AP Sbjct: 1063 LPESLFPQALEA--AAAITDPWNRANALIELAPY 1094 >gi|298530763|ref|ZP_07018165.1| response regulator receiver protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510137|gb|EFI34041.1| response regulator receiver protein [Desulfonatronospira thiodismutans ASO3-1] Length = 384 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 70/210 (33%), Gaps = 19/210 (9%) Query: 97 AHNIPLARKM-HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE- 154 A I AR + +S H + L+ ++ E+ + A L L+I Sbjct: 181 AGEIKRARAVVEQALSINHLLGK---AWFLKAELEKEEQNWQEARASLNRALEIQPRNAD 237 Query: 155 ----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 LY E D A+ +A++I+P+ W+ Y+ A Sbjct: 238 YFLCLGDTLLYLE-----DNMKARESFQRAMNIAPEEDWIKTRTWDIYLKHDLCREAEAS 292 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 N + +L ++ KG+M + +LK ++ AA S Sbjct: 293 FGSLLINCLSSD-----VLNNYAVALRKKGEMARAVELYAVALKKDPDNPGLLFNAAVSD 347 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 R+A LE+ ++ P A + Sbjct: 348 YYNGNFRRAVNRLERAIELQPGFAQAEAFL 377 >gi|163732373|ref|ZP_02139819.1| adenylate cyclase cya3 (Sinorhizobium meliloti) [Roseobacter litoralis Och 149] gi|161394671|gb|EDQ18994.1| adenylate cyclase cya3 (Sinorhizobium meliloti) [Roseobacter litoralis Och 149] Length = 588 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 79/235 (33%), Gaps = 13/235 (5%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA-----ITFLNQKKKN 217 +SA + +A+ I PD + W + L+ + Sbjct: 351 HKFTQEARDSALKLLDEAIKIDPDYAEAHGVAAYCHQQRYLWGGCDPQDRLASLHHAEAV 410 Query: 218 AKEWNRNRAIL-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A+ + L A +L D +A+ A +L L NS +A IC + + K Sbjct: 411 AEGRTDDATPLSFAAMALSALDNQHEVAATMLAR-ALDLSPNSALALICRSLVMTILGKP 469 Query: 277 RKAEVILEKIWKVNP-----H-PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 K V + +++P H PE L ++ + A R + N Sbjct: 470 EKGAVDAAQSLRLSPFDPLRHIPECVLAIAMLAVGHSKEAVDHARRAVDANPMFTPGRAT 529 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 ++ +E ID+A + AP I L ++ N D++ + A Sbjct: 530 LALCLVEDERIDEAADVMRTVLAKAPDTRISNLHERLLIVNGLGFDRVSAAMRLA 584 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 73/233 (31%), Gaps = 31/233 (13%) Query: 99 NIPLARKMHSYVSQQHTF-----HNEYLVYLLEVQIALAERQYNIAHEK-LEMMLQIPAT 152 + A + +Y QQ + L L + A+AE + + A M Sbjct: 374 DYAEAHGVAAYCHQQRYLWGGCDPQDRLASLHHAE-AVAEGRTDDATPLSFAAMA----- 427 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWSRAIT 209 + +A A ALD+SP++ V+ + A+ Sbjct: 428 ---------LSALDNQHEVAATMLAR-ALDLSPNSALALICRSLVMTILGKPE--KGAVD 475 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + ++ R I ++ G + A ++ A Sbjct: 476 A--AQSLRLSPFDPLRHIPECVLAIAMLAVGHSKEAVDHARRAVDANPMFTPGRATLALC 533 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVGKLKRALRLEEI 320 L+ + +A ++ + P I+N++ +++ ++ A+RL + Sbjct: 534 LVEDERIDEAADVMRTVLAKAPDTRISNLHERLLIVNGLGFDRVSAAMRLAGL 586 >gi|222053544|ref|YP_002535906.1| hypothetical protein [Geobacter sp. FRC-32] gi|221562833|gb|ACM18805.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 657 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%) Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN-----PHP 293 + M A + ++KL + ++A +C K+L + +A L ++N PH Sbjct: 517 REKMEAGLKELRTAIKLRPDYLLAHVCLGKTLSDLKQFDEATTELLTAARLNPNSPLPHI 576 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + Y E T + + E+ + + K+ + G++ A A+ + Sbjct: 577 FLGESY-ENRGEFTNAR-NEYTTAIAADPTHPEAHLRLGKLHAKEGNLPDAIAELEKSYL 634 Query: 354 IAPRK 358 + P + Sbjct: 635 VYPNE 639 >gi|62180273|ref|YP_216690.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127906|gb|AAX65609.1| putative N-acetylglucosaminyl transferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714747|gb|EFZ06318.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 389 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 17/164 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 + + A + +++ R AV L D +A Y A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136 Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + NS SI + +++ KA L+++ Sbjct: 197 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240 >gi|89095333|ref|ZP_01168251.1| type IV pilus biogenesis protein PilF [Oceanospirillum sp. MED92] gi|89080408|gb|EAR59662.1| type IV pilus biogenesis protein PilF [Oceanospirillum sp. MED92] Length = 244 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 2/152 (1%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 L A + L I + A L GD A++Y KA + P + Sbjct: 33 YLQTGDVVNAKTSFKRALDINSGYADAYNGLALAFQLEGDPGIAEQYYRKATSLDPSSAM 92 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + K + A L++ ++ R +A + R +N + D A+ H Sbjct: 93 IHNNFGAFLFSEKRYEEACRELSRATEDPFYNRRAQAFENLGRCYQNLQRTD--AAKHAF 150 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 SL++ N +A + + LI++ +A Sbjct: 151 QRSLQVTSNRPVALVELSDLLIAEGNYPEANK 182 >gi|328948042|ref|YP_004365379.1| hypothetical protein Tresu_1170 [Treponema succinifaciens DSM 2489] gi|328448366|gb|AEB14082.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema succinifaciens DSM 2489] Length = 1134 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 54/176 (30%), Gaps = 13/176 (7%) Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A + E + P L ++ + SA+ + A P + + Sbjct: 728 AEKSFEKSKEEPNVMFI----LGMDALEKHNYASAENFLRNATKKEPGNSTYFYQLGRVL 783 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + K+++ ++ K + A G + ++K+ + Sbjct: 784 AMQKKYNESLAAFQTSIKINGNF----APAHYNSGFVCEKLGKNKEALASYRNAIKIKPD 839 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-----EIANIYTHLLSENTVG 309 A + A L + +A + K+NP E+ + Y+ L + + Sbjct: 840 YENAFMGAGHILAEEKNYSEAVKSYSEAVKINPSRAQTYQELGSCYSELKNYSLAE 895 >gi|320200113|gb|EFW74702.1| hypothetical protein ECoL_02951 [Escherichia coli EC4100B] Length = 1093 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|315646851|ref|ZP_07899966.1| TPR domain protein [Paenibacillus vortex V453] gi|315277781|gb|EFU41105.1| TPR domain protein [Paenibacillus vortex V453] Length = 865 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 73/198 (36%), Gaps = 17/198 (8%) Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + A S G++ A+ + +A I P+ P + + + + W A Sbjct: 221 QFLAARSNAQICLVQGNVEGAEHWLREAAQIMPEEPDLNRMIGELCLQYSNWEEAFQAFK 280 Query: 213 QKKKNA-KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + + + E + N + L + +Y + L + A AA+ L Sbjct: 281 RMEASGNAEVHHNSDLAYCMLQLGMLED-----AYSMYQKVLVHTPDDAQALTGAAQCLE 335 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-----RALRLEEINKESVE 326 + +++ + +I ++ P +++ H + +L+ R E + ++ Sbjct: 336 QLGRIKESRELYLRIKQLCP----WDLHAHTQIDTLNQRLEQQMKMRLE--VEDRPDQMK 389 Query: 327 SLVIVSKIALEMGSIDQA 344 +L ++ + +E DQA Sbjct: 390 TLDELAGLYMEQQQYDQA 407 >gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 323 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 13/204 (6%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 E GD A +A+ I ++ Y L E+ +AIT LN+ + Sbjct: 74 RG--VEKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAITDLNRAIEI 131 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A ++ R GD+ + D +++ + N +A + + Q + Sbjct: 132 APNFDP----AYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQQENIQ 187 Query: 278 KAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A + ++N P + Y L + R +N + Sbjct: 188 EAITDFNQALEIN--PNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYSNRG 245 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + L+ + A A A++I P Sbjct: 246 FVHLQQNDLQTALADLNQALEINP 269 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 48/153 (31%), Gaps = 4/153 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + I A F + ++ A +AL+I+P+ Sbjct: 150 GDLEGAISDFTKAIDINPNLALAYNGRGFAHLQQENIQEAITDFNQALEINPNLVLAYNN 209 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + ++ AI N+ + A R + + D+ + D ++L Sbjct: 210 RANARLEQGKFKEAIADFNRAIAVNPNY----AQGYSNRGFVHLQQNDLQTALADLNQAL 265 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++ N A + + + + +A +K Sbjct: 266 EINPNYAQAYYHRGLTHVQLSNEEEAIADFQKA 298 Score = 37.6 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 21/189 (11%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 ++GDL A TKA+DI+P+ ++ + AIT NQ + Sbjct: 142 RGFAR--LQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQQENIQEAITDFNQALEI 199 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R+ ++G + D ++ + N + QN + Sbjct: 200 NPNL----VLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYSNRGFVHLQQNDLQ 255 Query: 278 KAEVILEKIWKVNPHPEIANIYTH--------LLSENTVGKLKRALRLEEINKESVESLV 329 A L + ++N P A Y H E + ++A L + + Sbjct: 256 TALADLNQALEIN--PNYAQAYYHRGLTHVQLSNEEEAIADFQKAADLSRQQGD-----M 308 Query: 330 IVSKIALEM 338 + + AL+ Sbjct: 309 TIYQNALDQ 317 >gi|167589230|ref|ZP_02381618.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ubonensis Bu] Length = 760 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 82/281 (29%), Gaps = 28/281 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYA 177 L + A E + + T + +C++G + Sbjct: 7 QLDAALAHHQAGRLADARVLYEAIRRSEPDQPDATHFLGL-----LACQLGRFPAGIALM 61 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +++ + D ++ AI + ++ A Sbjct: 62 ERSIALRADPVYLNNFG-NMLRAHGRLDDAIASYRRAVALKPDY----AEAHSNLGNALR 116 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 D GD A+ ++L L + A +L Q++ A +K + P A Sbjct: 117 DAGDPHAAMLSCAQALALRPDYAQAFNNLGNALRDQDELDAAARAYDKAIALEP----AY 172 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 H N R + +VE + + L +G++ + A++ R Sbjct: 173 ADAHYNRGNVFRAQGRLDDAVRCYRRAVELQPDLHQAHLNLGNVLFERDELEPAIESLTR 232 Query: 358 KE-------IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 L A ++A + ++ + A+ A PD Sbjct: 233 ASQGGSVEAFLNLAAAFDRA--GDLERAAASLRRAIAATPD 271 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 32/239 (13%), Positives = 74/239 (30%), Gaps = 12/239 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + + A +L GD ++A +AL + PD Sbjct: 85 GRLDDAIASYRRAVALKPDYAEAHSNLGNALRDAGDPHAAMLSCAQALALRPDYAQAFNN 144 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + E A ++ + A R +G + + ++ Sbjct: 145 LGNALRDQDELDAAARAYDKAIALEPAY----ADAHYNRGNVFRAQGRLDDAVRCYRRAV 200 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS-ENTVG 309 +L + A + L +++ A L + + V +A + E Sbjct: 201 ELQPDLHQAHLNLGNVLFERDELEPAIESLTRASQGGSVEAFLNLAAAFDRAGDLERAAA 260 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-APRKEIFLLLAQI 367 L+RA + E ++++ + G +A +A+ + + + A+I Sbjct: 261 SLRRA---IAATPDRAELHHHLAQVLVRQGKRPEALESCRIALALPGQTAHMHTVSAEI 316 >gi|316973855|gb|EFV57404.1| putative tetratricopeptide repeat-containing domain protein [Trichinella spiralis] Length = 1062 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 75/234 (32%), Gaps = 11/234 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + +Y+ N +V+ + + ++A + + +++ A +L Sbjct: 188 RAVSAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYKRAIELQPHFPDAYCNLANA 247 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + A+ AL++ P + A + + E+ Sbjct: 248 LKEKGFVAEAEECYNTALNLCPQHADSLNNLANIKREQGFIEEATRLYIKALEIFPEF-- 305 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A + +G + + E++++ A +L N A Sbjct: 306 --AAAHSNLASILQQQGRLTEAILHYKEAIRIAPTFADAYSNMGNTLKEMNDITGAMQCY 363 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + ++NP H +A+I H S N ++ ++ + ++ ++ Sbjct: 364 SRAIQINPAFADAHSNLASI--HKDSGNVPDAIQAYRTALKLKPDFPDAFCNLA 415 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 8/174 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFA 156 + A + ++ H + L L I + A + + P A Sbjct: 252 GFVAEAEECYNTALNLCPQHADSLNNL--ANIKREQGFIEEATRLYIKALEIFPEF-AAA 308 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L + G L A + +A+ I+P + + + A+ ++ + Sbjct: 309 HSNLASILQQQGRLTEAILHYKEAIRIAPTFADAYSNMGNTLKEMNDITGAMQCYSRAIQ 368 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + A + + D G++ + +LKL + A A L Sbjct: 369 INPAF----ADAHSNLASIHKDSGNVPDAIQAYRTALKLKPDFPDAFCNLAHCL 418 >gi|289192214|ref|YP_003458155.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] gi|288938664|gb|ADC69419.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22] Length = 635 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 6/128 (4%) Query: 134 RQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-APWV 190 Y+ A E E L + + L + + A Y KAL+ P W Sbjct: 17 GDYDKAIECFERALDECPEEGKWITLKCLALCYRLKENYDKAIEYFKKALEKCPKDKKWE 76 Query: 191 TEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y E+ RAI + + + + + R + + N D + Sbjct: 77 ILEDLGVCYYSKGEYGRAIEYFEKALELCPDEEKWRIWISLGDCYYNIR--DYDKAIDYY 134 Query: 250 IESLKLCD 257 ++LK+C Sbjct: 135 KKALKMCP 142 >gi|209526253|ref|ZP_03274783.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209493350|gb|EDZ93675.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 431 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 60/197 (30%), Gaps = 11/197 (5%) Query: 126 EVQIALAERQYNIAHEKL-EMMLQIPATREF-AVYSLYFESCRIGDLNSAQRYATKALDI 183 + + Q A + + + P E + + A KA+ I Sbjct: 241 QAEKLFLSNQLESAVDAYNQALKLEPNLAEVWNNRGVVLTKLKR--YQEAIASYEKAIQI 298 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 D P + AI ++ ++ A ++L N ++ D Sbjct: 299 RTDYPDAWSNRGVALGKLNYYQAAIFSYDRALALKPDY--LDAWNNRGQALMNLEQYD-- 354 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + ++ K+ N A+ + A L++ ++N P+ + Sbjct: 355 EAIASYNQAAKIRPNFYKIWYNKARCYALTGNRELAIENLKRALRIN--PDAVQKFAQQE 412 Query: 304 SENT-VGKLKRALRLEE 319 + + + +R +L + Sbjct: 413 PDFAGICQEQRFQQLLK 429 >gi|157162026|ref|YP_001459344.1| TPR repeat-containing protein [Escherichia coli HS] gi|157067706|gb|ABV06961.1| tetratricopeptide repeat protein [Escherichia coli HS] Length = 1124 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|156034555|ref|XP_001585696.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980] gi|154698616|gb|EDN98354.1| hypothetical protein SS1G_13212 [Sclerotinia sclerotiorum 1980 UF-70] Length = 471 Score = 41.5 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A +W +AI + E + + R+ N + DA ++++L N Sbjct: 20 AAHDWPKAIELYTKAI----ELDDQKPTYYSNRAQANIKSEAYGYAIADATKAIELDPNF 75 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + A A + + K ++A + + K P Sbjct: 76 VKAYYRRAVAYTAILKSKEALRDFKTVVKKAP 107 >gi|331674000|ref|ZP_08374763.1| putative tetratricopeptide repeat protein [Escherichia coli TA280] gi|331069273|gb|EGI40665.1| putative tetratricopeptide repeat protein [Escherichia coli TA280] Length = 1093 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|307313880|ref|ZP_07593496.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli W] gi|306906381|gb|EFN36896.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli W] gi|315061868|gb|ADT76195.1| conserved protein [Escherichia coli W] gi|323377551|gb|ADX49819.1| Tetratricopeptide TPR_1 repeat-containing protein [Escherichia coli KO11] Length = 1093 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|218555073|ref|YP_002387986.1| hypothetical protein ECIAI1_2602 [Escherichia coli IAI1] gi|218361841|emb|CAQ99441.1| conserved hypothetical protein [Escherichia coli IAI1] Length = 1093 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|218780011|ref|YP_002431329.1| hypothetical protein Dalk_2168 [Desulfatibacillum alkenivorans AK-01] gi|218761395|gb|ACL03861.1| TPR repeat-containing protein [Desulfatibacillum alkenivorans AK-01] Length = 639 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 4/144 (2%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E R G A + A+++ P ++ + + A + K+ Sbjct: 460 QELKRKGFYEEALLHHAIAINLRPREKYIWHPYYEVLIDMGRLDEAEAIAQKAVKDFP-- 517 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A ++ + + S + +++ L +S + AA +N+ KA Sbjct: 518 --QDAQAHNNLAIILSARDKAEQSLAEFEKAVALDPHSTIMRENAADEYARRNQPEKAVH 575 Query: 282 ILEKIWKVNPHPEIANIYTHLLSE 305 L + K++P I ++ + E Sbjct: 576 HLREALKISPRTAILHLRLAIELE 599 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + A + ++ A +L + KA+ + P + + E Sbjct: 500 GRLDEAEAIAQKAVKDFPQDAQAHNNLAIILSARDKAEQSLAEFEKAVALDPHSTIMREN 559 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 +Y + +A+ L + K + AIL + ++E GD+ + H E+ Sbjct: 560 AADEYARRNQPEKAVHHLREALKISP----RTAILHLRLAIELEKLGDVSRAIHHYKEAK 615 Query: 254 KLCDNSI 260 + + Sbjct: 616 RYNPTFV 622 >gi|134094645|ref|YP_001099720.1| putative response receiver protein [Herminiimonas arsenicoxydans] Length = 468 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 63/159 (39%), Gaps = 9/159 (5%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + K+ + AI ++ K +W + +L ++ + G + +++L L Sbjct: 70 RLQKKDLAGAIAECDRVLKIEPKWIVD---ILKTKAGAALELGQNDEARRSYLQALGLRQ 126 Query: 258 NSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 + + A + A+ ++ + +A + +LEK + ++ E+ L+ Sbjct: 127 DLVWAKLGLARCDQAEGRLEEAKIIVQGVLEKNAQYVDAYDLLAQIAESRGED-QQVLEA 185 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + + S + V A +G ++QA + A+ Sbjct: 186 LNKSYNVIPSARRSRM-VGDAAYRVGDLEQARSAYDKAL 223 >gi|53804652|ref|YP_113528.1| TPR domain-containing protein [Methylococcus capsulatus str. Bath] gi|53758413|gb|AAU92704.1| TPR domain protein [Methylococcus capsulatus str. Bath] Length = 586 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 5/168 (2%) Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A L A +L A++G+ + + E+LKL + A + A+ + A ++++ Sbjct: 197 ADLHFAAALLAANQGEFQQALSETEEALKLHPDWGRARVLQAQVMAQMGDSATAGDLIQR 256 Query: 286 IWKVNPHPE-IANIYTH--LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 K +P + IY+ + S + G + R+ + ++ + +++G +D Sbjct: 257 ALKRDPDNARLRLIYSQFLIKSGDIEGARRELERIVAKEPGNQDARFGLGLALIDLGRLD 316 Query: 343 QAHAK-AMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 A + A LA R + + L I A ++ L W Sbjct: 317 AARREFAALAASEKWRVQAYFYLGLI-DARKGRLNEALDWFDRVTTGP 363 >gi|54308912|ref|YP_129932.1| hypothetical protein PBPRA1723 [Photobacterium profundum SS9] gi|46913342|emb|CAG20130.1| hypothetical protein PBPRA1723 [Photobacterium profundum SS9] Length = 1261 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 57/255 (22%) Query: 137 NIAHEKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALD------------- 182 A + M P + R G+ A + KAL+ Sbjct: 329 AAARQLQYAMTTRPNDPEILG--GMGKVYLRWGNQTKALVFFKKALENDNDPDNQSKWKS 386 Query: 183 -ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 I + W +Y K++SRA L +K K + N L + KG+ Sbjct: 387 LIDTSSYWAFVDQGDKYTEKKQYSRAER-LYKKAKALQPNN---PYTLNRLAELYGIKGN 442 Query: 242 MIASYHDAIESLKLCDNSIMASICAAK--SLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + I++LK +S+ ++ + L+SQNK +A +A+ Y Sbjct: 443 YKEADRYYIQALKR--DSLNSTALRGRIDLLLSQNKSDQAIR-------------LADTY 487 Query: 300 THLLSENTVGKLKRAL----RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + ++ + +++++NKE + AL G A K + + Sbjct: 488 S-----SKQKRIVKVKVNELKIDQLNKE--------VQAALLAGDNPLASQKVEALLLLK 534 Query: 356 PRKEIFLLLAQIEQA 370 P L A I A Sbjct: 535 PT--SAWLRADIADA 547 >gi|332092617|gb|EGI97689.1| tetratricopeptide repeat family protein [Shigella boydii 3594-74] Length = 1093 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|320176150|gb|EFW51217.1| hypothetical protein SDB_01395 [Shigella dysenteriae CDC 74-1112] Length = 1090 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 515 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 574 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 575 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 629 >gi|119493200|ref|ZP_01624075.1| hypothetical protein L8106_15774 [Lyngbya sp. PCC 8106] gi|119452765|gb|EAW33942.1| hypothetical protein L8106_15774 [Lyngbya sp. PCC 8106] Length = 200 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 15/196 (7%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + E R G L+ A KA++ +P W + + AI + A Sbjct: 6 IANERLRAGKLDEAVVAYQKAIEENPCFSWAYHNLAEALTQQGRLEEAIV----AYRQAI 61 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + N A + +G + ++ ++ + A +SQ +++ Sbjct: 62 QLNPQSAWTYHNLAAVLTQQGLSTEAIAVYQKATEINPEFSSKTFFADHHKLSQEQQQ-- 119 Query: 280 EVILEKIWKVNPHPEIANIY------THLLSE--NTVGKLKRALRLEEINKESVESLVIV 331 I+E ++ PE A Y ++ + V +R + L+ +E + Sbjct: 120 AKIIEYRDRIQKQPEQAEFYHVLGQLLQIVGQRTEAVACFQRYIELQGDAV-HLEFYRNL 178 Query: 332 SKIALEMGSIDQAHAK 347 + L+ + + Sbjct: 179 GEALLDKTQFPEDRQQ 194 >gi|58584258|ref|YP_203274.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428852|gb|AAW77889.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 900 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 7/118 (5%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R RA L R L+ + + E+LKL + +A+ Q + ++ Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRADFALAANNLGFVYFRQGRSAESAR 841 Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 LE K++P +A + Y + K E+ + + +++ Sbjct: 842 RLETTLKIDPSRAVAYLNLGDAYAE--GGDREKARKAYSTYLELQPQVSGAAQARAQL 897 >gi|291283774|ref|YP_003500592.1| hypothetical protein G2583_3079 [Escherichia coli O55:H7 str. CB9615] gi|209763058|gb|ACI79841.1| hypothetical protein ECs3415 [Escherichia coli] gi|209763064|gb|ACI79844.1| hypothetical protein ECs3415 [Escherichia coli] gi|290763647|gb|ADD57608.1| hypothetical protein G2583_3079 [Escherichia coli O55:H7 str. CB9615] Length = 1124 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|148695062|gb|EDL27009.1| mCG129388 [Mus musculus] Length = 1245 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 104/338 (30%), Gaps = 75/338 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIA--------------HEK 142 A K+ + + E L V + +ALA+ + A E Sbjct: 575 GEQHEAAKVLQDAIHEFSGTCEELRVTIANADLALAQGDTDRALSMLRNVTTEQPYFIEA 634 Query: 143 LEMMLQI----------------------PATREFAVYSLYFESCRIGDLNSAQRYATKA 180 E M I P+ R F + I + A +A Sbjct: 635 KEKMADIYLKHRKEKMLYITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQA 692 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----------------WNRN 224 L+ +P + + + V +S+AIT+ K+ ++ + + Sbjct: 693 LNQNPKDGTLARKIGKALVKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKA 752 Query: 225 RAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +L + + E + M+ + + + AA + + R I Sbjct: 753 EKVLQHSLAHEPVSELSALMVDGRSQVLLAKVYSKMERPSDAIAALQQARELQAR----I 808 Query: 283 LEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVI 330 L+++ P H A I + + + ++A+ E+ ++ Sbjct: 809 LKRVQMEQPDAVPSQKHFA-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLE 867 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 ++++ L +D + L ++ + +L+A + Sbjct: 868 LAQLYLAQEDLDASLRHCALLLQRDQDNEPATMLMADL 905 >gi|67904274|ref|XP_682393.1| hypothetical protein AN9124.2 [Aspergillus nidulans FGSC A4] gi|40742767|gb|EAA61957.1| hypothetical protein AN9124.2 [Aspergillus nidulans FGSC A4] gi|259485460|tpe|CBF82501.1| TPA: heat shock protein (Sti1), putative (AFU_orthologue; AFUA_7G01860) [Aspergillus nidulans FGSC A4] Length = 575 Score = 41.5 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 43/153 (28%), Gaps = 16/153 (10%) Query: 129 IALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + A E L T + + A+ A K I P Sbjct: 336 AYEKLGDLDKAIENYNKSLTEHRTPDALTKLRN----------AEKARDKAKKEAYIDPV 385 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + Q+ +W A+ + K A + R R+ + Sbjct: 386 EAEKARELGQKKFQEADWPGAVDAFTEMTKRAPDDPRG----YSNRAAALIKLMAFPQAV 441 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 D E+++ A I +++L + + +A Sbjct: 442 QDCDEAIRCDPKFFRAYIRKSQALAAMKEYSRA 474 >gi|209920027|ref|YP_002294111.1| hypothetical protein ECSE_2836 [Escherichia coli SE11] gi|209913286|dbj|BAG78360.1| conserved hypothetical protein [Escherichia coli SE11] Length = 1124 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|218778927|ref|YP_002430245.1| hypothetical protein Dalk_1074 [Desulfatibacillum alkenivorans AK-01] gi|218760311|gb|ACL02777.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 647 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 32/217 (14%) Query: 174 QRYATKAL-DISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRAIL 228 + +AL I P + + + Y ++ A + L +KN + + A L Sbjct: 62 LKIKEEALGKIHPGVGEICNNIGRLYRKQGKYQEAESFYLRALEITEKNLGDAHPQAAAL 121 Query: 229 -----LIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC---AAKSLISQNKKRKAE 280 ++ +L + + + I L ++ + A Q+K +AE Sbjct: 122 CNNLAVLYHALGKYAQAEPLFMRALEIREKALGEDHPDVAQTCSNLALLYQDQDKYSQAE 181 Query: 281 VILEKIWKVN------PHPEIANIYTHLLS-------ENTVGKLK------RALRLEEIN 321 ++++ K+ HP+ A +Y L + L+ R L + + Sbjct: 182 HLIKRALKIEVNALGEDHPDTAAVYNILSGLYSSQGKYDQAEPLQLRVLKIREKVLGKNH 241 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + ++++ G D+A + A++I Sbjct: 242 PDYATACNNLAELYRMQGKYDKAEPLYIQALEIRETA 278 >gi|218767984|ref|YP_002342496.1| putative periplasmic protein [Neisseria meningitidis Z2491] gi|121051992|emb|CAM08301.1| putative periplasmic protein [Neisseria meningitidis Z2491] gi|325137744|gb|EGC60319.1| tetratricopeptide repeat protein [Neisseria meningitidis ES14902] Length = 612 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 63/315 (20%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 P A W+ + ++ + L + A E R LL+A++ Sbjct: 129 EPIPGKAQKRAGWLRNVLRERGNQH------LDGLEEVLAQADEGQNRRVFLLLAQAAVQ 182 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR-KAEVILEKIWK------- 288 D AS +L+ + + A Q +++ KA L+++ K Sbjct: 183 QDGLAQKASKAVRRAALRY--EHLPEAAVADVVFSVQGREKEKAIGALQRLAKLDTEILP 240 Query: 289 ---------VNPHPEIANIY---------------THLLSENTVGKL----KRALRLEEI 320 +PEI + + +++ ++ +L R L E Sbjct: 241 PTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLHRLDDAYARLNVLLER 300 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIEQANSHN 374 N + + + A+ + + + + A ++ + A + A+ + Sbjct: 301 NPNAD----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMIYADRRD 356 Query: 375 TDKILYWTQSALHAM 389 K+ W + + A Sbjct: 357 YTKVRQWLKK-VSAP 370 >gi|320196385|gb|EFW71009.1| hypothetical protein EcoM_01778 [Escherichia coli WV_060327] Length = 1093 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|315300528|gb|EFU59757.1| tetratricopeptide repeat protein [Escherichia coli MS 16-3] Length = 1093 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|320108751|ref|YP_004184341.1| tetratricopeptide repeat-containing protein [Terriglobus saanensis SP1PR4] gi|319927272|gb|ADV84347.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus saanensis SP1PR4] Length = 761 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 115/373 (30%), Gaps = 46/373 (12%) Query: 4 LIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWIL-----L 58 + ++ V+ +V + +T T + ++I+ +AW + Sbjct: 360 FFSFPGLMLAVVWGMWLVLQH----VMTTEKLRTLTPILIGVAIVLLCGYAWGAHVRNRV 415 Query: 59 FAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118 + + G + GL + + P A + + Q + Sbjct: 416 WKTEESLWLDDVIKSSHN-------GRGLMIYGLTQMNKGDYPTALEYFTKALQYTPNYA 468 Query: 119 EYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREF-AVYSLYFESCRIGDLNSAQRY 176 + L V + + A E ML P + A Y + G+ + Sbjct: 469 TLEINLGVVHGVM--GHRSEAEEHFRRAMLLTPNDDQVHAFYGRWLL----GEERIPEAL 522 Query: 177 ATK--ALDISPDAPWVTEAVVQQYVLAKEWS----RAITFLN------QKKKNAKEWNRN 224 A + A+ ++P + ++ + + AI L + ++ + Sbjct: 523 AEEQRAVALNPQRSIQRDLLLTVLSRTGDEASLRQAAIETLAIIPEDATARAFLQQAHPT 582 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A + SL +G S A +L A + + + A Sbjct: 583 NATDALNLSLAQYRQGQYAQSLESAQRALVFDPKMAEAYNNIGAAYGAMGRWDDAVANEI 642 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQ 343 K ++NP +IA + + KRA SV + +I +AL G + Sbjct: 643 KALQINPELDIAKNNLAIFQQ------KRA---ATTGPPSVVADLINRSMALNQAGKFAE 693 Query: 344 AHAKAMLAMKIAP 356 + A A+K+ P Sbjct: 694 SIDTARQALKLDP 706 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 38/116 (32%), Gaps = 19/116 (16%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT----------FLNQKK 215 R G + A +AL P + Y W A+ L+ K Sbjct: 596 RQGQYAQSLESAQRALVFDPKMAEAYNNIGAAYGAMGRWDDAVANEIKALQINPELDIAK 655 Query: 216 KNAKEWNRNRAIL---------LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 N + + RA LI RS+ G S A ++LKL NS +A Sbjct: 656 NNLAIFQQKRAATTGPPSVVADLINRSMALNQAGKFAESIDTARQALKLDPNSALA 711 >gi|303327039|ref|ZP_07357481.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] gi|302863027|gb|EFL85959.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] Length = 579 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 86/233 (36%), Gaps = 20/233 (8%) Query: 160 LYFESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKK 216 LY E+ G L PD+ + V +K+++ A LN K+ Sbjct: 134 LYAEALMEHGMPERGVTLMRVYLQKHPDSLDARLELALLLVKSKQFTEAEKLLNSIPAKQ 193 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + A LI + +N + +++K + + A A + + Sbjct: 194 RSPLVDYYHARALIGMARQN-------DAVPYLQKAVKEMPDFVEALAELAFIHEQRGEL 246 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK---RALRLEEINKESVESLVIVSK 333 R+A + EK+ K+N + L N +LK +AL+ + +V + V+ Sbjct: 247 REARTVYEKLIKLN----FSTQDVALRLVNISLRLKQPEKALQYMRLGPATVPFKLTVAS 302 Query: 334 IALEMGSIDQAHAKAMLAMKI--APRKEIFLLLAQIEQANSHNTDKILYWTQS 384 + ++ QA + + AP + ++LLLA + + L W Sbjct: 303 MFMDSRHYLQAESLLKQIVADGGAPGE-VYLLLADLTYEQRRDLPMALSWLDK 354 >gi|239787437|emb|CAX83909.1| TPR repeat protein [uncultured bacterium] Length = 663 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 50/214 (23%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHE------ 141 L GL + + A V +E V LL +A ++ A Sbjct: 7 LRQGLAHLEQGELEQAAARFDAV--LQMVPDEPEVLLLAAMVAEQRGNFSQALSWLGRGL 64 Query: 142 ---------------KLEMMLQIPATRE------------------FAVYSLYFESCRIG 168 L+ + ++ RE + + G Sbjct: 65 VRSPGDPRLHLKMGVVLKALKRVEPARERFLEAAELNPEDCEPHLQLGL-----LAQESG 119 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D A + +AL ++PD P + + E + A + Q KE R L Sbjct: 120 DDRGAVAHYQRALALAPDLPEAHFNLGCAWQSLGENASAESCFEQVLLVKKEHERAHYNL 179 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 I R + G + D + ++ A Sbjct: 180 GIIRQGD----GRNGQAVEDFATACRIRPGYAKA 209 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAMPDP 392 LE G ++QA A+ +++ P + LLLA + N + L W L + DP Sbjct: 12 AHLEQGELEQAAARFDAVLQMVPDEPEVLLLAAMVAEQRGNFSQALSWLGRGLVRSPGDP 71 >gi|226290243|gb|EEH45727.1| pre-mRNA-splicing factor CLF1 [Paracoccidioides brasiliensis Pb18] Length = 677 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185 A + + ++P + A++ Y + GD +Y + + +P Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKENP 318 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239 + V+ + + R + R L I +L E + Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378 Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 DM ++ E ++L + A+ I Q + A L P ++ Sbjct: 379 KDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y L E + K + E + + ++ + +++ + ID+A A L + Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497 >gi|145615460|ref|XP_001414541.1| hypothetical protein MGG_13130 [Magnaporthe oryzae 70-15] gi|145022282|gb|EDK06302.1| hypothetical protein MGG_13130 [Magnaporthe oryzae 70-15] Length = 2231 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 67/246 (27%), Gaps = 41/246 (16%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 E M + +L E+ R A Y + EA++ ++ Sbjct: 1194 EFMEHDDKALPIDIRTLGREAARCHAYAKALHYKELEF-LQDHNGGAVEALIVINNQLQQ 1252 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 AI L + + A+ L E ++ D +++ E S+ Sbjct: 1253 SDAAIGILRKAQSY------QDALHLKETWFEKLERWDEALEFYNKREKETPAGTSVPVE 1306 Query: 264 ICAA--KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN 321 + + L + + W +A + S ++ +R L Sbjct: 1307 VIMGKMRCLHALGE-----------WDT-----LAQLAGATWSNSSSELQRRFAPLATT- 1349 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 A +G D A + +P + F + I + + + W Sbjct: 1350 ------------AAWGLGKWDSMDAYLQSMKRTSPDRSFFQAILAIHRNQFG--EAVR-W 1394 Query: 382 TQSALH 387 A Sbjct: 1395 IDQARE 1400 >gi|78223239|ref|YP_384986.1| TPR repeat-containing protein [Geobacter metallireducens GS-15] gi|78194494|gb|ABB32261.1| TPR repeat protein [Geobacter metallireducens GS-15] Length = 883 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 81/236 (34%), Gaps = 16/236 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + + A A + +++ + + Y+ A+ LN+ E Sbjct: 340 LQQKRTDDAITEAKRVIELDDKNAFAHNVLGSAYIAKGMTDEAVRELNRAI----ELEPK 395 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + + + N +G + ++K+ + + + A + NK+ +A +L Sbjct: 396 LVGAHMKKGIVNLARGKRAEGEEELETAVKVAPDVLNSRYLLASYYMRLNKQARAIEVLR 455 Query: 285 KIWK--VNPHPEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + P A + ++ + L++A +++ + + ++ + Sbjct: 456 AGLRGGKQDAPLYNTMAAAAFADKREKDGILYLQKAREVDQA---YLPASFNLASYYISK 512 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQSALHAMPDPL 393 +A +K P L+ L I ++ + + Y+T+ A DP+ Sbjct: 513 KDNGRAAGLFNEILKRDPANLKALIGLGAISESEGKAQEAVAYYTK--AKATKDPV 566 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 81/225 (36%), Gaps = 7/225 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 N A L+ ++ A Y L +G A++ KAL +P P + Sbjct: 38 GNANGAIVLLKNAVEKDQNYFDARYKLAKAYMTVGKFEQAEKEFQKALRQNPSNPEIRLD 97 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + Y + +I K + A+ +I S D Y ESL Sbjct: 98 LAKLYNSINKPDESIA--EAKAYLSARAGSADALEVIGTSYGQKKMFDEAEKYLK--ESL 153 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGK 310 + A + AK ++ ++++ +L +I + +P A + N+ Sbjct: 154 QAEPARASAMLQLAKVYLATKREQEGMGLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKA 213 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 L+ ++ + + + + + + + G +D+A A ++ A Sbjct: 214 LEYYQKIMQADPDDANAAFRIGMMHISKGEVDKAERLADDLIRKA 258 Score = 37.2 bits (85), Expect = 5.9, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 72/221 (32%), Gaps = 16/221 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATRE---FAVYSLYFESCRIGDLNSAQRYATK 179 +L+ I +++ Y+ A + + + A+ +Y E R D A Sbjct: 668 HLVIASIYESQKDYDRAISAVRSGIAVEPGNLRASMALGGIY-EKKR--DFARAIAAYDD 724 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L +P A + + + A K A ++ L + Sbjct: 725 ILRKNPKNIPALFAKGAAFDQSGKKKEAAGIYRAVLKIAPDFVPALNNLAYLAAEGY--- 781 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPE 294 G+ + A + KL N+ +L+ K+ + +LEK + P H Sbjct: 782 GNKSEALSLASRANKLQPNNAGVMDTYGYALLINGKRTASVRVLEKAVSLLPNNPAVHYH 841 Query: 295 IANIYTHLLSENTVGKLKRALRL-EEINKESVESLVIVSKI 334 +A Y + + + L ES + +++++ Sbjct: 842 LAMAYRD-MGDRAKASVSVQKSLQYGEFPESAAARKLLAEL 881 Score = 36.8 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 86/262 (32%), Gaps = 13/262 (4%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A + + + ++ + + L+ L I+ +E + A Sbjct: 514 DNGRAAGLFNEILKRDPANLKALIGL--GAISESEGKAQEAVAYYTKAKATKDP--VGYL 569 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 SL R + A A + L +P+ + E K+++ A+ ++ +K A Sbjct: 570 SLASYYIRKKEAPKALALANEGLKGAPNNAALLELKGGLLAADKKYAEALKVYDELEKVA 629 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 RAI L +L ++ + A + + S + A SQ + Sbjct: 630 PT----RAIPLKIGALVV--TKNIPKAVEQAQKVVAANPKSAAGHLVIASIYESQKDYDR 683 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVG---KLKRALRLEEINKESVESLVIVSKIA 335 A + V P A++ + E + + N +++ +L Sbjct: 684 AISAVRSGIAVEPGNLRASMALGGIYEKKRDFARAIAAYDDILRKNPKNIPALFAKGAAF 743 Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357 + G +A +KIAP Sbjct: 744 DQSGKKKEAAGIYRAVLKIAPD 765 >gi|313157559|gb|EFR56977.1| tetratricopeptide repeat protein [Alistipes sp. HGB5] Length = 594 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 9/142 (6%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 + A A +A + W + + Q + A+ + A+ ++ + A N + LL Sbjct: 88 PDEAVELARRAYRLDTTNKWYHQFLGQALIFAQRYPEALGV-YKRLRAADPQNPDNYRLL 146 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEK 285 A + IA+ A S + LIS + KA ++E Sbjct: 147 AALYEQVQQPYSAIATLDSAELRFGRIPML---SAMKRQLLISTRQLDKAVDEAKAMVEA 203 Query: 286 I-WKVNPHPEIANIYTHLLSEN 306 ++ H +A++Y L ++ Sbjct: 204 APYEAQHHVVLADLYAILNKDS 225 >gi|222034254|emb|CAP76995.1| Uncharacterized protein yphG [Escherichia coli LF82] gi|312947120|gb|ADR27947.1| hypothetical protein NRG857_12655 [Escherichia coli O83:H1 str. NRG 857C] Length = 1093 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|156744315|ref|YP_001434444.1| hypothetical protein Rcas_4410 [Roseiflexus castenholzii DSM 13941] gi|156235643|gb|ABU60426.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941] Length = 360 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 7/193 (3%) Query: 75 MLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 +R L + + A K S + + + QI L + Sbjct: 161 SHDERRLQMTEDRLREQMTRMFEGESASADKRASAERESRMLCD-------QGQILLRQG 213 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + A E+ E L T + A +G + A +AL + P++ V Sbjct: 214 RPQEAFERFEAALAASDTNQSAWLWRAMALTDLGRFDDALASYDRALALEPESAGVWNNK 273 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + A+ + A + +A+ + R G + + S + Sbjct: 274 GALLMELGRLEAALECFERAIDLAAPISTVKAVYWLNRGKVLYMLGRYAEARDALMHSHE 333 Query: 255 LCDNSIMASICAA 267 L + A+ AA Sbjct: 334 LEPSPESAAGIAA 346 >gi|221069007|ref|ZP_03545112.1| tetratricopeptide TPR_4 [Comamonas testosteroni KF-1] gi|220714030|gb|EED69398.1| tetratricopeptide TPR_4 [Comamonas testosteroni KF-1] Length = 916 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 73/219 (33%), Gaps = 21/219 (9%) Query: 84 GYKALYTGLMSIAAHNIPLA---RKMHSYVSQQHTFHNEYLVYLL---------EVQIAL 131 GY + + A + + + LVYLL E + A Sbjct: 182 GYAKASQAYAATERRDFAAALPLARQAVAAAPARLDYQRLLVYLLVENGRFDEAEARAAR 241 Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + ML+ + A+ ++ GD+ A R+A ++ ++P A Sbjct: 242 LDNVKQLQSDADWQMLRTSIRQRQALRPFEQALQAREQGDMAKALRHAESSVRLAPQALA 301 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + + + ++A Q ++ + + L + A + ++ Sbjct: 302 PRLQWLGLLLQDGQAAQAQRVAEQGLALQHDPALQVLQGVALHVQGRGMASE----QAFD 357 Query: 248 DAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEK 285 A+ + L + A + ++ + +A+ +L+ Sbjct: 358 AALAAPHLSRSERQNYGVIALDAALAAGQTERAQRLLQA 396 Score = 39.1 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 82/244 (33%), Gaps = 35/244 (14%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNA 218 + D +A A +A+ +P +V V + A + + ++ Sbjct: 192 ATERRDFAAALPLARQAVAAAPARLDYQRLLVYLLVENGRFDEAEARAARLDNVKQLQSD 251 Query: 219 KEW-------NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 +W + +A+ ++L+ ++GDM + A S++L ++ + L+ Sbjct: 252 ADWQMLRTSIRQRQALRPFEQALQAREQGDMAKALRHAESSVRLAPQALAPRLQWLGLLL 311 Query: 272 SQNKKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + +A+ + E+ + P + ++ + AL +++ + Sbjct: 312 QDGQAAQAQRVAEQGLALQHDPALQVLQGVALHVQGRGMASEQAFDAALAAPHLSRSERQ 371 Query: 327 SLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + +++ AL G + LL +E ++ + A Sbjct: 372 NYGVIALDAALAAGQ----------------TERAQRLLQALETGSNADVGSRREQL-KA 414 Query: 386 LHAM 389 L + Sbjct: 415 LRSS 418 >gi|91775742|ref|YP_545498.1| TPR repeat-containing protein [Methylobacillus flagellatus KT] gi|91709729|gb|ABE49657.1| TPR repeat [Methylobacillus flagellatus KT] Length = 700 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 5/143 (3%) Query: 96 AAHNIPLARKMHSYVSQQHTFH---NEYLVYLLEV--QIALAERQYNIAHEKLEMMLQIP 150 AA ++ AR + Q+ L +L+ A + A + ++ + Sbjct: 120 AAGDLAAARTAYLEARQRAPQDTDIQAGLCSVLQALGNRAQQAGHFAEAEQHFRDLIALQ 179 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 Y+L G A +AL ISPD + ++ AI Sbjct: 180 PGNGAWHYNLGNALREQGQAAQAAECYRRALAISPDDADAHNNLGNVLRELQQLPEAIAC 239 Query: 211 LNQKKKNAKEWNRNRAILLIARS 233 + R L+ R Sbjct: 240 YERALAINPALYHARVHLVHQRQ 262 Score = 40.3 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 51/136 (37%), Gaps = 5/136 (3%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKN 217 L +C G L++A + + L ++P + + + A + + A T L +++ Sbjct: 81 GLALRAC--GQLDAAIHHFRQGLALAPGDSDLWQNLGAAQHAAGDLAAARTAYLEARQRA 138 Query: 218 AKEWNRNRAILLIARSLEN--ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 ++ + + + ++L N G + + + L + +L Q + Sbjct: 139 PQDTDIQAGLCSVLQALGNRAQQAGHFAEAEQHFRDLIALQPGNGAWHYNLGNALREQGQ 198 Query: 276 KRKAEVILEKIWKVNP 291 +A + ++P Sbjct: 199 AAQAAECYRRALAISP 214 >gi|74588419|sp|Q5K654|CLF1_PARBR RecName: Full=Pre-mRNA-splicing factor CLF1 gi|33316748|gb|AAQ04633.1|AF443189_1 cell cycle regulator protein Clf1 [Paracoccidioides brasiliensis] Length = 677 Score = 41.5 bits (96), Expect = 0.37, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 26/240 (10%) Query: 137 NIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALDISP 185 A + + ++P + A++ Y + GD +Y + + +P Sbjct: 260 ERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQIKENP 318 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-ENADK 239 + V+ + + R + R L I +L E + Sbjct: 319 KNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEELEA 378 Query: 240 GDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 DM ++ E ++L + A+ I Q + A L P ++ Sbjct: 379 KDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPKDKL 438 Query: 296 ANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 Y L E + K + E + + ++ + +++ + ID+A A L + Sbjct: 439 FKGYIDLERQLFEFVRCR-KLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYELGI 497 >gi|323499915|ref|ZP_08104874.1| TPR repeat-containing protein [Vibrio sinaloensis DSM 21326] gi|323315156|gb|EGA68208.1| TPR repeat-containing protein [Vibrio sinaloensis DSM 21326] Length = 336 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 93/281 (33%), Gaps = 29/281 (10%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQH--TFHNEYLVYLLEVQIALAERQYNIAHEKL 143 +A+ G ++ N+ LA + F + L + +I + +A Sbjct: 51 EAITRGDAALKQGNVDLALYEYIRSLSFENGQFRDRSLYNI--GRIHQSRGNLALAERAF 108 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + ++ A+ L S R GD+ + Y KA++ + + Sbjct: 109 TLAVETNPNNIQALEQLGIISSRDGDVKQGESYFLKAIN-------ADQLRFGSKRTLTD 161 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIM 261 ++ ++ K + + L D A +L++ +S+ Sbjct: 162 QD--LSTVDAVKVLKTDVSSPD---YAYMGLGVLADLDAKHELAQAYYQHALRIKPDSVK 216 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALR 316 + S R+A+ + + + +P+ E +A IY G++ RAL Sbjct: 217 TLTNSGYSYYMSGDYRQAQRLSLQALEEDPNNEKALNNLALIYLG------KGEINRALN 270 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + E+L V + G DQA A+ P Sbjct: 271 VFTRHMNKPEALNNVGYFLMLQGKPDQAIPYLQQAIDTKPT 311 >gi|260429340|ref|ZP_05783317.1| putative tetratricopeptide TPR_2 [Citreicella sp. SE45] gi|260419963|gb|EEX13216.1| putative tetratricopeptide TPR_2 [Citreicella sp. SE45] Length = 830 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 81/301 (26%), Gaps = 43/301 (14%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--- 151 + LA + + LL Q+ A E L +L Sbjct: 336 AGQQDAALAEAQEVAQAARDRGEAPAGALLLTAQMRDKAGDRAGAEETLRALLADTPLHL 395 Query: 152 -------TREF-------AVYSLY-----------------FESCRIGDLNSAQRYATKA 180 T A+ L GD A++ ++A Sbjct: 396 EANQLLATYLLDRGQPEPALRHLVAAQSVNSQQPQTLSLLSRAYAASGDAVMARQLQSEA 455 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 D S AP A S AI LN E + + + Sbjct: 456 FDASGRAPDAALRYALLLADAGSESAAIDVLNASLSRFPE--DLGLLTTLGEQYRLTAQW 513 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + AS D + + + ++A ++Q A L++ W + A Y Sbjct: 514 ERAASIEDRLRQIGSGEALLVAERIRFDRQVAQEDIEVAIGYLDQRWSEG--RDSAASYA 571 Query: 301 HLL----SENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + S + +R L L E + +A+ D+A A ++ A Sbjct: 572 AITRANLSSGHPERARRVLELGLSRFPEDRNLRAAGATLAMTEQKFDEAAAILQELLQDA 631 Query: 356 P 356 P Sbjct: 632 P 632 >gi|255076918|ref|XP_002502122.1| predicted protein [Micromonas sp. RCC299] gi|226517387|gb|ACO63380.1| predicted protein [Micromonas sp. RCC299] Length = 1318 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 10/207 (4%) Query: 94 SIAAH-NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++A + AR M + LL + A + +L Sbjct: 117 ALAGGPDSWRARGMAERALRMARGDGFDAKTLLGT-TENDRARTRKAKRWFDEVLDTEEG 175 Query: 153 R--EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 A+ R+G + A + I P + + A +W A+ Sbjct: 176 EGHLEALMGRVKVMERLGQVAGALDALNRVAVIHPSFVPAVAEKAKMRMRAGDWDAALET 235 Query: 211 LNQKKKNAK---EWNRNRAILLIARSLENADKGDMIASYHDAIESL--KLCDNSIMASIC 265 + + R RA L+ A MI DA+ESL + + S Sbjct: 236 AQGILERDPKNIDALRLRAFYLLGVEGNAAAGRAMIGQLTDALESLEGRNARLFVSCSRD 295 Query: 266 AAKSLISQNKKRKA-EVILEKIWKVNP 291 A+ + A +LE+ + P Sbjct: 296 LARVAGGTSTTLSALGRMLERARAIEP 322 >gi|94267436|ref|ZP_01290875.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93452004|gb|EAT02706.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 560 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L E + A + A + + + P +RE A+ L + D +A + L Sbjct: 368 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAAM-GLATVAQSRNDPLTALHLYQQIL 426 Query: 182 DISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P + +V A LN+ + A L + +A Sbjct: 427 ERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNR--------HPQAAPLHLTMGNLHAS 478 Query: 239 KGDMIASYHDAIESL 253 +G+ + +L Sbjct: 479 QGEWTRARRAYQNAL 493 >gi|114321550|ref|YP_743233.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227944|gb|ABI57743.1| DNA uptake lipoprotein-like protein [Alkalilimnicola ehrlichii MLHE-1] Length = 245 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 6/134 (4%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATKALDISP 185 AL E A E+ E +++ AT A + L + R G+L++A+ A++ + P Sbjct: 42 AALDEDDRAAARERFEALIERHATSRHAGQARAELAWLHYRAGELDAAREQASRMAETHP 101 Query: 186 DAPWVTEAV-VQQYVLAKEWSR--AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 D P + A+ V ++W A +Q+ + + L A + Sbjct: 102 DHPSLPYALYVAAMAAEQQWEDSLARGEPDQRLARRAFADYRAVVDLDAEDRHAGLALEA 161 Query: 243 IASYHDAIESLKLC 256 +++ +AI +L Sbjct: 162 MSALREAIARHELD 175 >gi|298714766|emb|CBJ25665.1| Methyltransferase [Ectocarpus siliculosus] Length = 738 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 67/210 (31%), Gaps = 21/210 (10%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L ++ A + L++ TR L G A +A++++ Sbjct: 297 LMARLLHDAGNLQGAVDAYLKALELDPTRSEVFRGLGGAYQSQGQHQMAFASYQQAINLA 356 Query: 185 PDAPWVTEAVVQQ-----------YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 P W A ++ Y A + AI +++ +L Sbjct: 357 P---WDLLAYLKLGMLYEDLAVGKYEEAGD--HAIRCFQYYLQHSG---SEDTDVLTRLG 408 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 + D ++ +L + + A + + ++ +A L++ +++P P Sbjct: 409 NLQVMRLDPGSAVETYRRALAVDKSLSNVWFNLANAYLKLGEEEEAATCLKEKLRLDPDP 468 Query: 294 E--IANIYTHLLSENTVGKLKRALRLEEIN 321 ++ Y E G+L + +L Sbjct: 469 NAGVSARYLLASLEADPGRLTESDQLAYAR 498 >gi|84626026|ref|YP_453398.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369966|dbj|BAE71124.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 900 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 7/118 (5%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R RA L R L+ + + E+LKL + +A+ Q + ++ Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRADFALAANNLGFVYFRQGRSAESAR 841 Query: 282 ILEKIWKVNPHPEIA-----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 LE K++P +A + Y + K E+ + + +++ Sbjct: 842 RLETTLKIDPSRAVAYLNLGDAYAE--GGDREKARKAYSTYLELQPQVSGAAQARAQL 897 >gi|116621859|ref|YP_824015.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225021|gb|ABJ83730.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 246 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 5/133 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISP 185 + + A +++ A+ +L + + + A + A A+ + P Sbjct: 103 ALALDSRGNRSDAQRAYRATIELDPNNAIAMNNLAFLLAEEGTSFDEALQLARHAMALMP 162 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D+ +T+ + + AI + + R LL + KG+ Sbjct: 163 DSMQMTDTAGWVQLKRGDNDAAIALFSDAVAKEPAEDSFRDHLL----MALERKGERAGI 218 Query: 246 YHDAIESLKLCDN 258 + + I +LK + Sbjct: 219 FGETISALKQAPS 231 >gi|332830243|gb|EGK02871.1| hypothetical protein HMPREF9455_01121 [Dysgonomonas gadei ATCC BAA-286] Length = 551 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 12/195 (6%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA 156 + LA++ V +Q + +IA E + A E + P + Sbjct: 33 GELKLAKEYFQKVLRQ----SPAEANYYLGEIAFQEGKTAEAKSYYEQAIAGNPES-ALG 87 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + D A+ + + V A+ Q Y+ +A+ K + Sbjct: 88 AIGLAKLQLKS-DPKGAEDQLKEIQKKNKKDVTVILAIAQAYLDNGMKEKALE----KLQ 142 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +A++ ++ + I A + + +++ N ++A + A+ N+ Sbjct: 143 DARKADKKSPYIYIFEGDMLAKENKPGDAAMQYDQAINFDANCVLAYMKGARVYEFINR- 201 Query: 277 RKAEVILEKIWKVNP 291 + A +L+K+ ++NP Sbjct: 202 KTATDMLKKVIEINP 216 >gi|320186348|gb|EFW61082.1| hypothetical protein SGF_01429 [Shigella flexneri CDC 796-83] Length = 1068 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 607 >gi|331658691|ref|ZP_08359635.1| conserved hypothetical protein [Escherichia coli TA206] gi|331054356|gb|EGI26383.1| conserved hypothetical protein [Escherichia coli TA206] Length = 1093 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|302508623|ref|XP_003016272.1| hypothetical protein ARB_05671 [Arthroderma benhamiae CBS 112371] gi|291179841|gb|EFE35627.1| hypothetical protein ARB_05671 [Arthroderma benhamiae CBS 112371] Length = 884 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199 Q P Y + GD + A ++ +AL + PD+ + + + Sbjct: 475 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 530 Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 A+++ AI + + + LL R+ + + + + D +L+ Sbjct: 531 NAAFKARKYREAIDLYTKGLEVDPNNKDINSKLLQNRAQAHININEYDKAIKDCTSALEF 590 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + I A AK+ +A L+ I + +P Sbjct: 591 DPSYIKARRVRAKANGGAGNWDEALKELKDIAESSP 626 >gi|283853837|ref|ZP_06371056.1| hypothetical protein DFW101DRAFT_3626 [Desulfovibrio sp. FW1012B] gi|283570772|gb|EFC18813.1| hypothetical protein DFW101DRAFT_3626 [Desulfovibrio sp. FW1012B] Length = 274 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 12/141 (8%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFES----CRIGDLNSAQRYATKALDISPD 186 LA+ A ++ L+ G + Y +A++ SPD Sbjct: 127 LADGNLLEAQRNFRAAVED----YVDEKGLFPLIASRLLDAGQFKPSFEYIRRAVEESPD 182 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++ A+EWS A L + + +L +L A G + Sbjct: 183 NARAYDFLLTAAGKAEEWSLAERILLDVQAKG----VRQPLLDQTLALVEARLGHWAEAR 238 Query: 247 HDAIESLKLCDNSIMASICAA 267 A ++ A+ A Sbjct: 239 SAAKRAVDAAPRLAEAARVLA 259 >gi|188493285|ref|ZP_03000555.1| tetratricopeptide repeat protein [Escherichia coli 53638] gi|188488484|gb|EDU63587.1| tetratricopeptide repeat protein [Escherichia coli 53638] Length = 1124 Score = 41.1 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|322436160|ref|YP_004218372.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9] gi|321163887|gb|ADW69592.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9] Length = 810 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 73/251 (29%), Gaps = 35/251 (13%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ---------RYATKALDISPDAPWV 190 L MM + P TR V L E C+ D + +Y + + V Sbjct: 240 RNTLRMMSRNPETRLTPV--LAREICQRTDSAAMLDGSIASLGSQYVITLHATNCNTGEV 297 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKK-----------------NAKEWNRNRAILLIARS 233 Q ++ A++ + + + + A+ + S Sbjct: 298 LYTEQVQAARKEDVLHALSTVASNLRSRLGESISSIRSLDTPLDEATTSSLDALKAFSES 357 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 ++ A+ A +++L A + +++ + K ++ H Sbjct: 358 ARVENESGSAAAIQLAQRAVELDPKFAAAWAILGRLYGDIGQEKSSAESTAKAYEFRDHA 417 Query: 294 E------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM-GSIDQAHA 346 I Y ++ N + ++ S + + L + G D+A Sbjct: 418 SDHERFFIVASYEMQVTGNLEKAEQTCETWAQVYPNDAGSYGFRAGLILRVFGQYDKAIE 477 Query: 347 KAMLAMKIAPR 357 A + I P Sbjct: 478 NAEHLVGIHPD 488 >gi|299532473|ref|ZP_07045864.1| tetratricopeptide repeat protein [Comamonas testosteroni S44] gi|298719558|gb|EFI60524.1| tetratricopeptide repeat protein [Comamonas testosteroni S44] Length = 385 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 82/216 (37%), Gaps = 5/216 (2%) Query: 177 ATKAL---DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232 A +AL + + A++ Y +++W++A + + + + +++ A L Sbjct: 128 AEEALNRLEGTQYEGEARLALLAIYERSRDWAQAAAIVRKMQAAGQGDFSTRLAHYLCED 187 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + G + ++ ++L+ + + A+ Q + +A L+ + + +P Sbjct: 188 AQSQVAHGQLDKAFAQLQQALETAPQAPRPRLELAQLQHRQGRSAQALSSLQALAQNSPA 247 Query: 293 PEIANIYTHLLSENTVGKLKRALRLEEINKESVESL-VIVSKIALEMGSIDQAHAKAMLA 351 + G L A L + E SL ++ + +A++ S D A Sbjct: 248 ALPLAASLLVEVAEATGALAEARDLLLKHYEQAPSLDLLQALVAVDQKSGDAAAPGRQRL 307 Query: 352 MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 ++ + + AQ + + ++ Q AL+ Sbjct: 308 VQHLEHESSLVAAAQWLEGETLTEEQYHATVQKALN 343 >gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus] Length = 650 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 16/164 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATR----------EFAVYSLYFESCRIGDLNSAQRYATKALD 182 E ++ +A + LE M T + E+ R+ D A + + Sbjct: 211 EGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKLEALALGGEGV- 269 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P + + + A W + + L + K N + + + + Sbjct: 270 --PMSTTMYNFGIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLIDACAKDANLED 327 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEK 285 +Y + ++ L + +A S I + ++A +L++ Sbjct: 328 ALAYLTEMRAVGLAPTFF--AYISAMSAIKVAGQWKEALSLLDE 369 >gi|292614103|ref|XP_002662144.1| PREDICTED: tetratricopeptide repeat protein 37-like [Danio rerio] Length = 1566 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 69/195 (35%), Gaps = 17/195 (8%) Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 R Y Y E D A+ +A ++ P A V + + A+T L Sbjct: 491 RLLGHY--YREV--AKDQGRARGCYKRAFELDPSDAEAGAAAVDLSMEQGDMDSALTVLQ 546 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + A + A + R L + G + D +L+ + C ++ ++ Sbjct: 547 SVTERATPGSAKWAWM--RRGLYHLKIGQHQQAIADLQAALRADPQDWVCWECLGEAYLN 604 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE--INKESV----- 325 + A +K + P I ++Y + +G+ K A + + KE Sbjct: 605 RRSFTAALKAFDKAHVLQPT-SIYSLYQTAAIKQILGRFKEAAAEYKQILEKEDYVPALK 663 Query: 326 ---ESLVIVSKIALE 337 E L+ ++K AL+ Sbjct: 664 GLGECLLALAKSALD 678 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 20/185 (10%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN----KKRKAEVILE 284 L ++L + K + +E+L +S + + R +L+ Sbjct: 419 LTLKALLHVAKEQHKQAEESFLEALSRSPDSGELFFLLGSLYWNMGEEIRRDRSKTHLLK 478 Query: 285 KIWKVNPH-----PEIANIYTHLLSENTVGK--LKRALRLEEINKESVESLVIVSKIALE 337 K++P+ + + Y + + + KRA L + E+ +++E Sbjct: 479 AA-KLDPYLGSVFRLLGHYYREVAKDQGRARGCYKRAFEL---DPSDAEAGAAAVDLSME 534 Query: 338 MGSIDQAHAKAMLAMKIA-PRKEIFLLLAQ-IEQANSHNTDKILYWTQSALHAMPDPL-W 394 G +D A + A P + + + + + + Q+AL A DP W Sbjct: 535 QGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHLKIGQHQQAIADLQAALRA--DPQDW 592 Query: 395 ISDDG 399 + + Sbjct: 593 VCWEC 597 >gi|225163601|ref|ZP_03725909.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2] gi|224801803|gb|EEG20091.1| tetratricopeptide TPR_2 repeat protein [Opitutaceae bacterium TAV2] Length = 652 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 7/133 (5%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q ++ A RA + Q ++A A + L + + +L+L Sbjct: 17 QAHLQAGRLVRADSLCRQLLQHAP----RDAAVYYLAGLLALRLQRPAEAITRLMTALRL 72 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTVGKLK 312 +S A+ A LI + +AE++L K ++ P A + L Sbjct: 73 SPDSAPAATLLATVLIDAGRAAEAEIMLAKTARLAPRSAGIVSALAHVQKLQGRVKEAAS 132 Query: 313 RALRLEEINKESV 325 R ++ +S Sbjct: 133 AYERATQLAPDSP 145 >gi|254284407|ref|ZP_04959375.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium NOR51-B] gi|219680610|gb|EED36959.1| tetratricopeptide TPR_2 repeat protein [gamma proteobacterium NOR51-B] Length = 567 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 90/269 (33%), Gaps = 19/269 (7%) Query: 124 LLEVQIALAERQYNIAHEKL--EMMLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKA 180 LL + AL R + L + M+ A +L E ++ D +A A + Sbjct: 47 LLAAEFALRNRDFQTGLRLLLEQAMILDDP--ALARRALQLAEFMQVND--AALIAAMRL 102 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 D+ PD ++ + + +RAI +K R A L L++ + Sbjct: 103 ADLDPDDSAAAATAMRLLIAVGQPARAI---EYARKAKAGGRRINAPAL----LQDFSQR 155 Query: 241 DMIASYHDAIESLKLC---DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 A +L + ++ A Q A L+ + P E A Sbjct: 156 PAAERRIIATGINELAMQYPEDVDLTLAQALLKREQGDTAAAIEQLDALLSREPDDERAL 215 Query: 298 I-YTHLLSENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + +T L + K R N ++ + +++ +D+A + + + + Sbjct: 216 VVWTQLALDTDRDKPFGRIDDAVNENPDNERLRLQYARLLASNDQLDRALEQFDVLIASS 275 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQS 384 PR +LL A + + + + Sbjct: 276 PRNGDYLLSAALVELEREDYEAGRQRLDQ 304 >gi|325522202|gb|EGD00845.1| TPR repeat-containing protein [Burkholderia sp. TJI49] Length = 383 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 59/160 (36%), Gaps = 16/160 (10%) Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE- 294 D + ++L++ + + A++ L +A I+ V +P+ Sbjct: 1 QLAVDDKEGAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGIVSFEKYVQQNPKS 56 Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 +A +L + K+ + +++ + L+ ++ I ++ +D A A Sbjct: 57 RDARLALSQLYLADDRLDDAQKQFETMRKLDAKDPTPLMALALIKIQQKKLDDASAYLKQ 116 Query: 351 AMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LA+I N + W Sbjct: 117 YVQLGAKQPDLDVGQGYIYLAEI-AIEQGNDAQASQWLDK 155 >gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 1280 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 4/112 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A T+AL+I+PD A + AI Q ++ A Sbjct: 594 GDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDDYTQALNLNPDY----AC 649 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + R + +D D + D E++ + + A A ++A Sbjct: 650 IYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLGNYQRA 701 >gi|255264733|ref|ZP_05344075.1| TPR domain protein [Thalassiobium sp. R2A62] gi|255107068|gb|EET49742.1| TPR domain protein [Thalassiobium sp. R2A62] Length = 562 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 16/257 (6%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 +H + LL ++ Q+++A + + + + A R G + Sbjct: 279 AEHLRSDHIEALLLSARLLEELGQFDLATQAYDSVPRSDPAYHAAELGRSAALRRAGRSD 338 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 +A T+ + D P V +A+ ++ A + + L Sbjct: 339 AAIEVLTQLAETHGDLPQVHQALADGLRRDGDYDAANASYSTALSLFTKTMPFHWRLYFH 398 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVN 290 R++ G+ + D +SL L + + + Q K +A ++E+ Sbjct: 399 RAVTFERLGNWSEAEADLRQSLALNPSQPEVLNYLGYSLVERQEKIDEALTLIERAAAER 458 Query: 291 PHPEI------ANIYTHLLSENTVGKLKRALRLEEINK---ESVESLVIVSKIALEMGSI 341 P +Y E V L+RA LE ++ + + +G Sbjct: 459 PDTGFIIDSLGWVLYRRGEFEQAVTHLERASELEPVDPVVNDH------LGDAYWAVGRE 512 Query: 342 DQAHAKAMLAMKIAPRK 358 +A + A+ P + Sbjct: 513 TEARFQWSRALSFDPTE 529 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 80/263 (30%), Gaps = 61/263 (23%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL+ + + Q A + + + P R F +Y KAL + Sbjct: 129 LLQAWSHVGQGQMARALDDFDDVTASPGLRAFGLYH-------------------KALAL 169 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + ++ A + + + RA L + L D+ D Sbjct: 170 A---------------SVGDFEDADAVFVEAQSGQRT---RRATLAHTQVLSQLDRNDDA 211 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---- 299 A+ + + ++ +A L + +P IA ++ Sbjct: 212 LRLMTAVFGNSFGADIAPIA-----------EELRAGAPLGFSFVTSPTDGIAEVFFSVA 260 Query: 300 ----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + + T+ + A L + +E+L++ +++ E+G D A + Sbjct: 261 GALDGEMEPDFTLIYTRIAEHL---RSDHIEALLLSARLLEELGQFDLATQAYDSVPRSD 317 Query: 356 PRKEIFLL--LAQIEQANSHNTD 376 P L A + +A + Sbjct: 318 PAYHAAELGRSAALRRAGRSDAA 340 >gi|168462824|ref|ZP_02696755.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634056|gb|EDX52408.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 389 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 17/164 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 + + A + +++ R AV L D +A Y A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136 Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + NS SI + +++ KA L+++ Sbjct: 197 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240 >gi|332344424|gb|AEE57758.1| tetratricopeptide repeat protein [Escherichia coli UMNK88] Length = 1093 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|313199915|ref|YP_004038573.1| hypothetical protein MPQ_0148 [Methylovorus sp. MP688] gi|312439231|gb|ADQ83337.1| TPR repeat-containing protein [Methylovorus sp. MP688] Length = 640 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 80/264 (30%), Gaps = 37/264 (14%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y A LE +LQ+ T + + +G SAQ Y +AL PD Sbjct: 103 GRYEEALTALESVLQLRETDAASAFLAGNACMMLGHAESAQAYYQRALQYRPDYAEAYHN 162 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEW------------------------------NR 223 + ++W A++F N+ ++ Sbjct: 163 LGIILNQRRQWQDALSFFNKAIDLKPDYLEAYTSCGNALIELGKHDFAIAHFDHVLQVQA 222 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + L R + + +L A++ A +L++ ++ +A Sbjct: 223 QNPLALNGRGVALKHLRQHALALASFDAALAARPGFAEATLNRANALLALDRHEEALEAY 282 Query: 284 EKIWKVNPH-PEI----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + PH P++ N Y L + L+ + ++ ++ L + I L Sbjct: 283 GAALALTPHNPQVYSNRGNAYLDLGQYDAA--LQDYDQALQLEPDNATVLWNKALICLVH 340 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL 362 G +Q + + Sbjct: 341 GDFEQGWHLFEHGWEAEGPPRGYR 364 >gi|260856643|ref|YP_003230534.1| hypothetical protein ECO26_3596 [Escherichia coli O26:H11 str. 11368] gi|257755292|dbj|BAI26794.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368] Length = 1093 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|254453074|ref|ZP_05066511.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238] gi|198267480|gb|EDY91750.1| tetratricopeptide TPR_2 [Octadecabacter antarcticus 238] Length = 572 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 83/314 (26%), Gaps = 68/314 (21%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L + A Y+ A L A + +G + SA A + Sbjct: 34 LAARQAAISGDYDAAALYFRDALLADANNTALMEQTLAAYLGVGQVESAAGIARPFISAG 93 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL------IARSLENAD 238 ++ A++ Q A++W + + + ++ D Sbjct: 94 GESQIANIALMAQAARAEDWDAIFDLIEAGHEVGPLLDGLAQAWAYLGKGDTVHAMMRFD 153 Query: 239 K----------GDMIASYHDA----IESLKLCDNSIM---------ASICAAKSLISQNK 275 + G + A ++ + + + + L+ Sbjct: 154 EVIDTPGLRGFGQQHKALALAMSGDLDGASAIYDLPPNIGIIPTRGSVVAHLQILVQLGD 213 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR------------------- 316 +A ++E+ + +P PE+A + + + + + Sbjct: 214 FERAGDMIERAFGEDPDPELAALRSAITAGEVPDLSRAVATPSDGISYAFKGFSDILQGE 273 Query: 317 -------LEE-----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-------- 356 L I ++ + +++ +G D A P Sbjct: 274 ANESYLLLYAQAARYIAPHDADTQIATARLLNALGQYDAAAQTFAQVATDDPAFHSAEIG 333 Query: 357 RKEIFLLLAQIEQA 370 R E L +IEQA Sbjct: 334 RAEALRLAGRIEQA 347 >gi|119493430|ref|XP_001263905.1| DnaJ domain protein [Neosartorya fischeri NRRL 181] gi|119412065|gb|EAW22008.1| DnaJ domain protein [Neosartorya fischeri NRRL 181] Length = 522 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 7/180 (3%) Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173 + L L+ + LA A + + + + +G A Sbjct: 28 PDTPLSSLVASAKAHLASGSARDALLYFDAAVSRDPSNYLTIFQRG--AAYLSLGRTAQA 85 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR--NRAILLIA 231 + L + PD + +W A+ + K E R A Sbjct: 86 LDDFDRVLQLKPDFESALLQRARLRAKTADWDGALHDFERAGKKLSEEYRETQEARDAAF 145 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + +G A ++ S+ A + + + L + +++P Sbjct: 146 QAFDAEKQGAWDDCVGRANTAILKASTSLGLRQTRAHCRFEKGEVEEGISDLVHVLQLSP 205 >gi|104783051|ref|YP_609549.1| M48 family peptidase [Pseudomonas entomophila L48] gi|95112038|emb|CAK16765.1| putative peptidase M48 family [Pseudomonas entomophila L48] Length = 478 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 58/202 (28%), Gaps = 5/202 (2%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + D + + E ++ V + Q +K+ Sbjct: 200 GILNLEKAGYDPRNMPNMFERLARQYRYDAKPPEFLLTHPVTESRIADTRNRAEQARKDG 259 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E ++ +L +G + L A A + I + + Sbjct: 260 TEDTLRYQLIRARVALTY--EGTPGLAAKRFRAQLDENPQLDAARYGLALAQIKGGQLNE 317 Query: 279 AEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A L+ + P+ +A I + + +RA RL+ + + + + + Sbjct: 318 ARENLKPLLAKAPNDITYNLAQIDLDITNNRLADAQQRAQRLQGLYPGNYPLKQVRADLL 377 Query: 336 LEMGSIDQAHAKAMLAMKIAPR 357 ++ G +A +K P Sbjct: 378 IKQGKPAEAEKVLDDLVKSRPD 399 >gi|16127358|ref|NP_421922.1| TPR domain-containing protein [Caulobacter crescentus CB15] gi|221236164|ref|YP_002518601.1| tetratricopeptide repeat family protein [Caulobacter crescentus NA1000] gi|13424790|gb|AAK25090.1| TPR domain protein [Caulobacter crescentus CB15] gi|220965337|gb|ACL96693.1| tetratricopeptide repeat family protein [Caulobacter crescentus NA1000] Length = 673 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 73/259 (28%), Gaps = 18/259 (6%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNI--AHEKLEMMLQIPATREFAVYSLYFES 164 + + + +L A M +P + L Sbjct: 33 QARAILEVVPRHADTTRVLAA-AQRLSGDAEGGLATVAPLAMA-LPNLPLAQLE-LALCL 89 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R+G A R + + P + + L + A L ++ + + Sbjct: 90 ERLGRTAEAARAFDRVSALEPRLSEAWRGLSESLELLGDRQGAERALARQLRASTRDP-- 147 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L+ + + + + + LK + A A++ + AE +L Sbjct: 148 ----LLVEAATALAEDRLGEAERLLRDRLKADAGDVAAIRMLAETGARLGRYADAEALLT 203 Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + ++ P A +L + L + +L + + + I +G Sbjct: 204 RCMELA--PNFAAARHNLATMLYRQNKNLEALAQIEQLVAKDARHPGYANLYAAILARLG 261 Query: 340 SIDQAHAKAMLAMKIAPRK 358 D+A A + P + Sbjct: 262 EYDRAIAVYGQVLADYPNQ 280 >gi|103486441|ref|YP_616002.1| tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256] gi|98976518|gb|ABF52669.1| Tetratricopeptide TPR_2 [Sphingopyxis alaskensis RB2256] Length = 613 Score = 41.1 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 80/299 (26%), Gaps = 41/299 (13%) Query: 87 ALYTGLMSIAAH-NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 AL +++ A K L + + A LE Sbjct: 54 ALARVAIALGDGVGAEAAVKGAIEAGANDAALRP-----LLARAFELQGDGARALAALEA 108 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 IP A + GDL +A+ +A+ P + + V + + + Sbjct: 109 GPVIPEMLGEAAWVAGDVHLANGDLAAAREAYDRAVHELPRSSALWVDVARFRDASADMR 168 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A ++ A E + + L ++ + A+ +L + A I Sbjct: 169 GARDAVD----YAIELDAANSAALAYKANLVRRAEGLTAALAWYDRALAADPGNAAALID 224 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 A +L + R + + L+RA L Sbjct: 225 QAATLGDLGRYR----------------------------DMLTALRRAAVLV---PREP 253 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 + + +A + A + + F+LL+ + + W + Sbjct: 254 RIHYLQAVLAARAANYRLARSLLQRTRGALDSEPGFMLLSAVVELELGGEAVAASWAER 312 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 6/188 (3%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 AR + V + ++L ALA +Y +A E + A + Sbjct: 426 GNTARAIERAVRLRDANPGVADAHMLLGDAALAGGRYALAVEAYRAARNLDAGERTTLR- 484 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-KEWSRAITFLNQKKKNA 218 + + A AL + + + + W AI + Sbjct: 485 -LANALYRAGDAAGSGAAIMALRDRQPSSVAADRIAGHLAIELGHWDAAIAHFERVGSRI 543 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A++L + A KGD + + +L + A L + K++ Sbjct: 544 GD---RDAVVLRELARAWAAKGDDARALVLIDRAYRLQPLNAGIMELYAALLERRGKRQA 600 Query: 279 AEVILEKI 286 A + +K Sbjct: 601 AADLRDKA 608 >gi|332197745|gb|AEE35866.1| superkiller protein 3-like protein [Arabidopsis thaliana] Length = 1140 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 30/179 (16%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLEN 236 A + SP A W + + K+WS A+ L + + A+ L + L Sbjct: 111 RDASEKSPKAFWAFCRLGYIQLHQKKWSEAVQSLQHAIRGYPTMSDLWEALGLAYQRLGM 170 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 I +Y AIE L + I A + +A + RK + E+ K++P Sbjct: 171 F--TAAIKAYGRAIE---LDETKIFALVESANIFLMLGSYRKGVELFEQALKISP----- 220 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + L + L+ SK + +G+ A + A K A Sbjct: 221 ---------------QNISVLYGLAS----GLLSWSKECINLGAFGWAASLLEDARKAA 260 >gi|299136536|ref|ZP_07029719.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp. MP5ACTX8] gi|298601051|gb|EFI57206.1| Tetratricopeptide TPR_2 repeat protein [Acidobacterium sp. MP5ACTX8] Length = 696 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 68/184 (36%), Gaps = 27/184 (14%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL---KLCDNSIMASICA----AKSLISQN 274 +R+ A + D+ A +++ KL ++ S + Sbjct: 43 DRSSAYYHYGLAKIYEDEASGNGRQDLATQAIEQYKLALDADPGSRMLQDGLSNLYFKLG 102 Query: 275 KKRKAEVILEKIWKVNPHPE-------IANIYTHLLSENTVGK--------LKRALRLEE 319 + R+A + +V HP+ + +Y L + + +K ++ E Sbjct: 103 RIREAVTAAQD--QVAKHPDDADAHMLLGRVYLRSLGDGQSPQSSDMLQMAIKEYEKIAE 160 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQI--EQANSHNTD 376 + +E+ +++ ++ +A A+ A +I +E+ L +A++ EQ + Sbjct: 161 LKPNDLETHLLLGQLYGLNHDSAKAEAQFKAAQQIDGSSEEVVLSMARLYSEQGDLQRAA 220 Query: 377 KILY 380 K++ Sbjct: 221 KVIA 224 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 89/275 (32%), Gaps = 27/275 (9%) Query: 130 ALAERQYNIAHEKLE----MMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDI 183 A + ++A + +E + P +R + +LYF ++G + A A + Sbjct: 61 ASGNGRQDLATQAIEQYKLALDADPGSRMLQDGLSNLYF---KLGRIREAVTAAQDQVAK 117 Query: 184 SPDAPWVTEAVVQQYVLA---KEWSRAITFLNQKKKN-----AKEWNRNRAILLIARSLE 235 PD + + Y+ + + ++ L K + N LL+ + Sbjct: 118 HPDDADAHMLLGRVYLRSLGDGQSPQSSDMLQMAIKEYEKIAELKPNDLETHLLLGQLYG 177 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL----EKIWKVNP 291 + A + + + + A+ Q ++A ++ E Sbjct: 178 LNHDSAKAEAQFKAAQQIDGSSEEV--VLSMARLYSEQGDLQRAAKVIADVSEDDRSARM 235 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +A IY L + + + ++ ++ ++ + G D A Sbjct: 236 DFALAGIYDQLKQ--PKQAVAAYRATLDQDPDNTDAKRGLANALIANGETDAAAKIFAEI 293 Query: 352 MKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + P + + A I++ H ++ L + A Sbjct: 294 ISSDPQDAQSLIREADIQRQQGH-YEQALATLKKA 327 >gi|299754015|ref|XP_001833698.2| cell division cycle protein 27/anaphase promoting complex subunit 3 [Coprinopsis cinerea okayama7#130] gi|298410567|gb|EAU88243.2| cell division cycle protein 27/anaphase promoting complex subunit 3 [Coprinopsis cinerea okayama7#130] Length = 639 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 92/286 (32%), Gaps = 29/286 (10%) Query: 100 IPLARKMHSYVSQQHTFHNEYL--VYLLEVQIALAER-------QYNIAHEKLEMMLQIP 150 AR++ Y ++ E L + + Y+ A +I Sbjct: 318 ASAARRLALYDCKRCLKELERLPPAHQKSASTLVMIGKVHYELQDYSSAERAFRSAREIE 377 Query: 151 ATRE--FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 R VYS + S A + L+I+P + A+ + L K+ ++A+ Sbjct: 378 PYRLWDMEVYSTLLWHLQRNIELS--YLAQELLNINPQSSQAWIAIGNLFSLQKDRTQAL 435 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 T K A + + + A E D+ ++ S +L++ A Sbjct: 436 TCF----KRAAQLDPSCAYAFTLSGHETIDE-NLDVSTTFFESALRVDARHYNAWYGLGT 490 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKESV 325 + +K R+AE K +++PH + + + L + E E+ Sbjct: 491 CYLRASKIRRAEYHYRKALEIHPHNAVILGCVAMTLERRQEYDQALSYYNKAIEACPENA 550 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLL 363 +K+ + M ++A + P ++ L Sbjct: 551 LVRYRRAKMWVSMRKYNEALKDLEHLRRTTPEEANVIFQLARVYRL 596 >gi|91211873|ref|YP_541859.1| hypothetical protein UTI89_C2868 [Escherichia coli UTI89] gi|237705056|ref|ZP_04535537.1| tetratricopeptide repeat protein [Escherichia sp. 3_2_53FAA] gi|91073447|gb|ABE08328.1| hypothetical protein YphG [Escherichia coli UTI89] gi|226901422|gb|EEH87681.1| tetratricopeptide repeat protein [Escherichia sp. 3_2_53FAA] gi|294493666|gb|ADE92422.1| tetratricopeptide repeat protein [Escherichia coli IHE3034] Length = 1124 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|307167322|gb|EFN60967.1| Mitochondrial import receptor subunit TOM70 [Camponotus floridanus] Length = 591 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 6/163 (3%) Query: 94 SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIPA 151 +I ++ LA M + F + Y+L Q+ +QY+ A + + + P Sbjct: 422 AIFNRDVRLAEEAMKDFEKAFIKFPDRSECYMLYAQMMAETQQYDKADMYFAKAIEKDPK 481 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 V+ + G+++ A Y KAL+ E++ V AI Sbjct: 482 NATIYVHKGLLQLQWNGNIDKAVEYFRKALETDEKCEHAYESLGSIEVQRGNIREAIRLF 541 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++ E R L SL +A + + +E ++ Sbjct: 542 DKAL----ELCRTSMELAHLYSLRDAAQTQLNLQNRLGMEGIR 580 >gi|302392828|ref|YP_003828648.1| hypothetical protein Acear_2093 [Acetohalobium arabaticum DSM 5501] gi|302204905|gb|ADL13583.1| Tetratricopeptide TPR_2 repeat protein [Acetohalobium arabaticum DSM 5501] Length = 729 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 8/101 (7%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNP----HPEIANIYTH-LLSENTVGKLKRALRLEEIN 321 A+ + KA +L++ ++ P + ++A Y + +K AL L+ Sbjct: 267 AQLYYEVLETDKAVEMLKQAVEIKPKIKYYRKLAEFYREQSRYNKAIEAIKEALVLDYKR 326 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 E + ++ L++ +IDQA + A+ +AP + +L Sbjct: 327 G---ELHYTLGELHLQLQNIDQARSSLERAVNLAPTNKEYL 364 >gi|322420095|ref|YP_004199318.1| TPR repeat-containing protein [Geobacter sp. M18] gi|320126482|gb|ADW14042.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp. M18] Length = 665 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 67/240 (27%), Gaps = 16/240 (6%) Query: 40 SPFVILSILYFFLFAWILLFAVSRFFLSCPAML-----FHMLHKRNYDKGYKALYTGLMS 94 S I + + + P L K + Y G+ Sbjct: 432 SARAITVGIAALALVFGGVTWQRNKVWESPVSLWGDVVSKSPAKSRANDHY-----GVAL 486 Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A + Q + + L L ++ + A E ++ + + Sbjct: 487 SGVGRTGEAIEFLKTALQINPRNEYALYNL--GRLFDETNNIDAAIGCYEAVIDLKPDLD 544 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A +L + GD + A +Y AL P + + AI Sbjct: 545 LAYNNLAVDYLLKGDDDRAIQYYNIALKHKPQFAEAHNNLGFALQRKGKVDEAIEHYRAA 604 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + + +A + + KG++ + E+L+L A AK+L + Sbjct: 605 IRENPGY--AKAYNNLGEA--YLAKGELDRAIGQFREALRLRPEDEAARENLAKALQQKG 660 >gi|221042950|dbj|BAH13152.1| unnamed protein product [Homo sapiens] Length = 630 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 349 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 404 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 405 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 457 >gi|254282484|ref|ZP_04957452.1| hypothetical protein NOR51B_977 [gamma proteobacterium NOR51-B] gi|219678687|gb|EED35036.1| hypothetical protein NOR51B_977 [gamma proteobacterium NOR51-B] Length = 498 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 91/327 (27%), Gaps = 29/327 (8%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + L Y + + L ++ + A + +L A A+ Sbjct: 19 DEDLEAAEARYAALLASDPQSAEAKLGLGRVLQQQGFQRPAMGLFQSVLDDDAKHVGALV 78 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L +G ++A +A+ PD V + Y + A+ + A Sbjct: 79 GLGLSLKAMGWNDAAADTLVEAVRAQPDDGKVWGHLASAYSASGREDEAVAAYQEALLLA 138 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + A R L D + SY D + + + + A+ LI+ + Sbjct: 139 PDDLELHA--WFNRYLGVLGHDDFLKSYRDRLV---IQPDDQACASELARLLIAGGCPDE 193 Query: 279 AEVILEK---IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A +L + +P + + L+ A + + + + Sbjct: 194 ALAVLTEHVDAESASPATGVLRVEALRELGQFDSSLEAARTGLRHFPQHRDVKLAFAIAL 253 Query: 336 LEMG-SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH---AMPD 391 + G +A A K AP + + I ++ AL + Sbjct: 254 MASGADYGEAEALLGSMAKAAPD----------------DQEVIAHYLT-ALRYTGSDRY 296 Query: 392 PLWISDDGYLSSVWLPLSPISKTLCYF 418 W+ + L S L Sbjct: 297 RGWVDYARIVHPSTLIASEGCADLDTL 323 >gi|195435350|ref|XP_002065657.1| GK14555 [Drosophila willistoni] gi|194161742|gb|EDW76643.1| GK14555 [Drosophila willistoni] Length = 598 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 14/135 (10%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--- 227 A KA+ ++PD A+VQ+ + A+ +QK+ + + +AI Sbjct: 394 EPALAEFDKAVSLAPDH---AIALVQRCYAE--YRLALLSGDQKRLESVMRSFEQAIEKF 448 Query: 228 -----LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEV 281 + AD+ ++ +++KL + + A ++ + KA Sbjct: 449 PDCVECYSLMAQVLADQQQFPQAHQYYDKAMKLAPTNPALIVHQAIMMLQWRGDIEKAVQ 508 Query: 282 ILEKIWKVNPHPEIA 296 +LE +V+P E+A Sbjct: 509 LLEHAIEVDPKCELA 523 Score = 38.0 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 6/166 (3%) Query: 93 MSIAAHN-IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP 150 +++ + + L M S+ F + Y L Q+ ++Q+ AH+ + M P Sbjct: 424 LALLSGDQKRLESVMRSFEQAIEKFPDCVECYSLMAQVLADQQQFPQAHQYYDKAMKLAP 483 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 V+ GD+ A + A+++ P E + V +RA+ Sbjct: 484 TNPALIVHQAIMMLQWRGDIEKAVQLLEHAIEVDPKCELAYETLGTVEVQRAHLTRAVEL 543 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + +++++A L+ SL NA + + I+ + Sbjct: 544 FEKALI----YSKSQAELVHVYSLRNAALAQINVTKKLGIDMNSVS 585 >gi|147769448|emb|CAN74770.1| hypothetical protein VITISV_014241 [Vitis vinifera] Length = 306 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 12/140 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G LN A + +AL I+P +V + + +A + + E R Sbjct: 175 MRKGRLNEAAQCCRQALAINP-------LLVDAHSNLGNFMKAQGLIQEAYSCYIEALRI 227 Query: 225 R---AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + AI + + GD+ + E++KL A + + ++A V Sbjct: 228 QPSFAIAWSNLAGLFMESGDLTRALQYYKEAVKLKPTFADAYLNLGNVYKALGMPQEAIV 287 Query: 282 ILEKIWKVNPHPEIANIYTH 301 ++ + PE A Y Sbjct: 288 CYQRALQTR--PEYAMAYGE 305 >gi|145345359|ref|XP_001417181.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577408|gb|ABO95474.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1059 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 9/162 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD---------LNSAQRYATKALDIS 184 + A +L++ A+ L + D + +A R +A Sbjct: 219 GDFKTAKLAFARVLKLDERNVEAMLGLALCELSLHDIRSQQHLDSVAAAMRLLERAFMHD 278 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P V + ++A ++ + +N E RNRA ++ +G + Sbjct: 279 PHNQAVNNVISDNLLMADDYEKVEKLTRLALQNNAETPRNRAKAAFNQARALHARGQVPQ 338 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + L ++ + + +++ + A ++K Sbjct: 339 AQALYLTATNLDEHYVPPYFGLGQIALAKGDVKLAWNYMDKA 380 >gi|254481224|ref|ZP_05094469.1| Sulfotransferase domain family protein [marine gamma proteobacterium HTCC2148] gi|214038387|gb|EEB79049.1| Sulfotransferase domain family protein [marine gamma proteobacterium HTCC2148] Length = 665 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 30/269 (11%), Positives = 85/269 (31%), Gaps = 20/269 (7%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A + A + + + + + + A+ +Y A + +++ Sbjct: 117 ATGHDDKAEEAFARSRAL----SPQKGQIEQASVLFAQGKYREAETVAKELVRQNPQDVN 172 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A L + + + A+ K + ++P + +++ AI L + + Sbjct: 173 AAALLARIAIQAHCYDDAEALLRKVVQMAPPFIQAWHDLSTALKEQSKFTEAIEALKKAR 232 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + L A +++ + +L++ + A + L + K Sbjct: 233 EIEPDNAITHYFLGAALAMD----SSPELAEASYQRALQIDSSLSGAHLGLGHVLKTLGK 288 Query: 276 KRKAEVILEKIWKVNP-----HPEIAN----IYTHLLSENTVGKLKRALRLEEINKESVE 326 + + K+ P H ++N ++ E+ +L+ +L + + Sbjct: 289 QEEGIAAYRAAMKLRPNFGEIHYSLSNLKTFVFDDAEIEDMTRRLES-EQLSKESVVHF- 346 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + K + D+A A + Sbjct: 347 -CFALGKAFEDAKDYDKAFEYYSRANETH 374 >gi|212693847|ref|ZP_03301975.1| hypothetical protein BACDOR_03369 [Bacteroides dorei DSM 17855] gi|212663599|gb|EEB24173.1| hypothetical protein BACDOR_03369 [Bacteroides dorei DSM 17855] Length = 259 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 208 ITFLNQK----KKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 LNQK +++ +++NR L AR+ + + D E+ KL Sbjct: 153 RALLNQKELKYRESLEDFNRLVSDNPRDVSYLKARATLAVEMNTPDLALLDLEEAAKLAP 212 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVN-PHPEI 295 + + + +SQ KKR+A V EK ++ P PE+ Sbjct: 213 DDAEIYVMCGEIYLSQKKKREAYVAFEKAIELGVPRPEL 251 >gi|190194345|ref|NP_001121730.1| tetratricopeptide repeat protein 21B [Danio rerio] gi|169146276|emb|CAQ13801.1| novel protein similar to vertebrate tetratricopeptide repeat domain 21A (TTC21A) [Danio rerio] Length = 1321 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 93/277 (33%), Gaps = 45/277 (16%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEM-MLQIPAT 152 + +I A+ S QH +LL QI L + Y ++ + LE+ + Sbjct: 510 SGDIDAAQ-----SSLQHCLDQNPAHADAHLLMAQIHLIQGNYKLSSQSLELCLSHNFEI 564 Query: 153 REFAVYSLYF-ESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 RE +Y L ++ R G L A + + + + + S A Sbjct: 565 REHPLYHLIKAQAQRKMGQLQEAIQ--------------TLQMAMSLCAVKRTGSSAKR- 609 Query: 211 LNQKKKNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 K+ + L +A +L N ++ + DAI + +I A Sbjct: 610 -QSKRVELSSADCVSVFLELAEALWLNGEQHEAAKVMQDAINEFTGTPEELRVTIANADL 668 Query: 270 LISQNKKRKAEVIL-----EKIWKVNPHPEIANIYTHLLSENTVGKLKRA-----LRLEE 319 + + A +L E+ + + ++A+IY + E KR L + Sbjct: 669 ALMRGDTELALSMLRNITPEQPYYIQAKEKMADIYLNHRKE------KRLYVSCYRELVD 722 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 S +++ + + + A A+K P Sbjct: 723 KMPN-PHSFLLLGDAYMNIQEPELAIEVYEQALKKNP 758 >gi|114681195|ref|XP_001143495.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 564 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 197 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 256 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 257 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 316 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 317 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 375 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 376 RAIYELAI 383 >gi|115403015|ref|XP_001217584.1| hypothetical protein ATEG_08998 [Aspergillus terreus NIH2624] gi|114189430|gb|EAU31130.1| hypothetical protein ATEG_08998 [Aspergillus terreus NIH2624] Length = 522 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 10/141 (7%) Query: 118 NEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSAQ 174 + L L+ + LA A + + T + + S R A Sbjct: 29 DTPLSSLVASAKSHLASGSARDALLYFDAAIARDPTNYLTIFQRGAAYLSLRRN--TQAL 86 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEW----NRNRAILL 229 + L++ PD + + +W+ A++ L + KK++ E+ A L Sbjct: 87 EDFDRVLELKPDFESALLQRSRLRASSADWTGALSDLAKAGKKSSPEYAELEEARDAALK 146 Query: 230 IARSLENADKGDMIASYHDAI 250 ++ + D I + A+ Sbjct: 147 AQKAEDRKQWDDCITQANVAV 167 >gi|89109355|ref|AP_003135.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110] gi|162135907|ref|NP_417044.4| conserved protein [Escherichia coli str. K-12 substr. MG1655] gi|170082159|ref|YP_001731479.1| hypothetical protein ECDH10B_2716 [Escherichia coli str. K-12 substr. DH10B] gi|238901714|ref|YP_002927510.1| hypothetical protein BWG_2313 [Escherichia coli BW2952] gi|300951739|ref|ZP_07165558.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|300958815|ref|ZP_07170927.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|161789053|sp|P76585|YPHG_ECOLI RecName: Full=Uncharacterized protein yphG gi|85675444|dbj|BAE76731.1| conserved hypothetical protein [Escherichia coli str. K12 substr. W3110] gi|87082126|gb|AAC75602.2| conserved protein [Escherichia coli str. K-12 substr. MG1655] gi|169889994|gb|ACB03701.1| conserved protein [Escherichia coli str. K-12 substr. DH10B] gi|238860360|gb|ACR62358.1| conserved protein [Escherichia coli BW2952] gi|260448371|gb|ACX38793.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli DH1] gi|300314563|gb|EFJ64347.1| tetratricopeptide repeat protein [Escherichia coli MS 175-1] gi|300449023|gb|EFK12643.1| tetratricopeptide repeat protein [Escherichia coli MS 116-1] gi|315137173|dbj|BAJ44332.1| hypothetical protein ECDH1ME8569_2476 [Escherichia coli DH1] Length = 1093 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|83643569|ref|YP_432004.1| TPR repeat-containing protein [Hahella chejuensis KCTC 2396] gi|83631612|gb|ABC27579.1| protein containing tetratricopeptide repeats [Hahella chejuensis KCTC 2396] Length = 311 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 38/200 (19%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D A R ALD +P A A++ ++ + A + + +R A Sbjct: 18 DYEKATRNLKSALDSAPSAE--GHALLALCLIPQNRILAARV---EAQRGVAEDRRSAFC 72 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 A + + A+ +L+L ++ A ++ ++ ILE Sbjct: 73 HYAAAAASEAGKHYDAARRHIELALELEPQ--TSAYQIASL--RLDRLQQGSDILEP--- 125 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 L + + +++ + +QA+ A Sbjct: 126 -------------------------LKTLLSERPNDLAVIYALAECYCDSSEWEQAYLYA 160 Query: 349 MLAMKIAPR-KEIFLLLAQI 367 A+++ + +L+A++ Sbjct: 161 GRALRLEATSQRALMLMARV 180 >gi|94309670|ref|YP_582880.1| tetratricopeptide repeat protein [Cupriavidus metallidurans CH34] gi|93353522|gb|ABF07611.1| putative N-Acetylglucosaminyl transferase; Tetratricopeptide TPR repeat protein [Cupriavidus metallidurans CH34] Length = 409 Score = 41.1 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 6/153 (3%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A + + P RE A+Y L + R G L+ A+ + L P A Sbjct: 84 GETERAIRVHQNLATRPDLPEPEREHALYELGQDFLRAGLLDRAEESLRR-LMSGPYAAS 142 Query: 190 VTEAVVQQYVLAKEWSRAITFL-NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 +++ Y + KEW +AI + + +++ A + + K + Sbjct: 143 AKRVLLELYEVEKEWQKAIEAARELQALDQQDYRVQIAQFCCELAQDALLKKRPEDAVEW 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + + ++ A I + A Sbjct: 203 LRRATQENPANVRAPILLGDVSAAGGDTEGALK 235 >gi|331648241|ref|ZP_08349331.1| conserved hypothetical protein [Escherichia coli M605] gi|330912319|gb|EGH40829.1| uncharacterized protein YphG, TPR-domain containing [Escherichia coli AA86] gi|331043101|gb|EGI15241.1| conserved hypothetical protein [Escherichia coli M605] Length = 1093 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|297566081|ref|YP_003685053.1| hypothetical protein Mesil_1660 [Meiothermus silvanus DSM 9946] gi|296850530|gb|ADH63545.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus silvanus DSM 9946] Length = 370 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 89/311 (28%), Gaps = 73/311 (23%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA-----QRYATKA------L 181 ++ A E ++ + ++Y L R+G + +A + A A + Sbjct: 56 AGRFETAQPFFERAVKECNSSAESLYFLARNQMRLGLMTAAIENLRRSIAQNATFINSYI 115 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++ + +A+ L ++A+ N A + R++ +G Sbjct: 116 ALAQAYTDSFRFAENREAAKGNLDQALNVL----RDAERVNSKYAPIYSWRAVVLGLQGQ 171 Query: 242 MIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKVNP--------- 291 + A ++ L D+ A A ++Q K +A I P Sbjct: 172 YDRAIEAANRAIALDDD--PALRSTLASLYVAQGKPDEALKIYNDAVNKYPKDSDLRIKY 229 Query: 292 ---------------HPEIANIYTHLLSENTVGKLKRALRLEEINK-------------- 322 H A I +E V + + L+ Sbjct: 230 GTFLLARKDCTAALAHLNQAAILAPGNAEVYVYQGQALECLKSWKPAGAAYENAVALSPV 289 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 E+ + ++ LE+G +A A+ + P+ F YW Sbjct: 290 RYPEAYAGLGRVYLELGDAQKARFNLTKAVALEPQNASF-----------------RYWL 332 Query: 383 QSALHAMPDPL 393 A + D Sbjct: 333 GKANEVLGDKA 343 >gi|291614814|ref|YP_003524971.1| hypothetical protein Slit_2357 [Sideroxydans lithotrophicus ES-1] gi|291584926|gb|ADE12584.1| TPR repeat-containing protein [Sideroxydans lithotrophicus ES-1] Length = 591 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 32/272 (11%), Positives = 80/272 (29%), Gaps = 11/272 (4%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L L IA Q +A + + + A + + D ++A Sbjct: 70 LYEFLLGDIAAQRNQPKLAAQAYLDLAKTTRDPRVARRA-AQLAYESRDYDTAVESFKLW 128 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 ++ P +P + + + + A L++ + + Sbjct: 129 EELEPASPLAKQLYLSLLLSGGKLQEARPLLDEVLRADPASAGRTFTSTYPMAAHGTQDK 188 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-- 298 I ++ A+ + A++ + K+ A + + + P ++A + Sbjct: 189 SAILAWTIAVTHPY--PDVAEGHWAVAQAAAAAGKQDLALAEIHRAVTLRPDWDVAAVFE 246 Query: 299 ---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 Y + + + LK+ + + E+ E + ++ L A + + Sbjct: 247 AQLYLNSEPQKGLDLLKKF---LDAHPENRELRLYYARALLNQKQFAAARDEFQRLLDDR 303 Query: 356 PRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 P + D+ Q AL+ Sbjct: 304 PDSPDLAFAVALISMQMGEYDRAEKELQQALN 335 Score = 36.8 bits (84), Expect = 9.2, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 23/299 (7%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAE---RQYNIAHEKLE-MMLQIPATREFAVYSLY 161 + Q + L +AL +Y+ A ++L+ + + Y L Sbjct: 290 AAARDEFQRLLDDRPDSPDLAFAVALISMQMGEYDRAEKELQQALNKGGRDESTVHYYLA 349 Query: 162 FESCRIGDLNSAQRYAT--KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + D +A + K + A A++ A + A+ L++ Sbjct: 350 QLNEARKDDAAALEHYRLVKEGEYGYAARLREVALLD---KAGKLDEALDALHRAVAKND 406 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 E ++ EN + ++ + + + AA +K Sbjct: 407 EQRVQLIMIDAQLLRENKKYETSYQVLAEGLKKFPENPDLLYQTAMAAD---KLDKVELF 463 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGK-------LKRALRLEEINKESVESLVIVS 332 E ++ K+ K++ P+ A+ Y + L + + + +K + ++ + + Sbjct: 464 EKLIRKLMKIS--PDNAHAY-NALGYSLLDRKVRIKEAMKLVEKAYQLEPDDAAITDSMG 520 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 MG++D++ A P EI L ++ + WT SA A PD Sbjct: 521 WGYYLMGNLDESLKFLNRAFAANPDPEIAAHLGEVMWMHGDKAGARKIWTDSA-KANPD 578 >gi|55859637|emb|CAI11004.1| transmembrane and tetratricopeptide repeat containing 4 [Homo sapiens] Length = 684 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 403 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 458 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 459 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 511 >gi|16760172|ref|NP_455789.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765052|ref|NP_460667.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142057|ref|NP_805399.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413366|ref|YP_150441.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161613809|ref|YP_001587774.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167549790|ref|ZP_02343548.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168230140|ref|ZP_02655198.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194446469|ref|YP_002040959.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194469605|ref|ZP_03075589.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737248|ref|YP_002114737.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247715|ref|YP_002146321.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265165|ref|ZP_03165239.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198242977|ref|YP_002215435.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390499|ref|ZP_03217110.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927717|ref|ZP_03218918.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213052586|ref|ZP_03345464.1| hypothetical protein Salmoneentericaenterica_06516 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213416473|ref|ZP_03349617.1| hypothetical protein Salmonentericaenterica_00137 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213424422|ref|ZP_03357235.1| hypothetical protein SentesTyphi_01405 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213582489|ref|ZP_03364315.1| hypothetical protein SentesTyph_15343 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647983|ref|ZP_03378036.1| hypothetical protein SentesTy_12279 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855514|ref|ZP_03383754.1| hypothetical protein SentesT_16285 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224583802|ref|YP_002637600.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238911902|ref|ZP_04655739.1| hypothetical protein SentesTe_12321 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289825191|ref|ZP_06544499.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25324989|pir||AD0655 conserved hypothetical protein STY1343 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420238|gb|AAL20626.1| putative N-acetylglucosaminyl transferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502466|emb|CAD08423.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137686|gb|AAO69248.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127623|gb|AAV77129.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161363173|gb|ABX66941.1| hypothetical protein SPAB_01543 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194405132|gb|ACF65354.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194455969|gb|EDX44808.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712750|gb|ACF91971.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197211418|gb|ACH48815.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243420|gb|EDY26040.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937493|gb|ACH74826.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602944|gb|EDZ01490.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323059|gb|EDZ08255.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205324977|gb|EDZ12816.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205335504|gb|EDZ22268.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|224468329|gb|ACN46159.1| hypothetical protein SPC_2023 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|267993649|gb|ACY88534.1| hypothetical protein STM14_2066 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312912699|dbj|BAJ36673.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085795|emb|CBY95571.1| Uncharacterized protein HI1223 Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224336|gb|EFX49399.1| Heat shock predicted periplasmic protein YciM, precursor [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614966|gb|EFY11891.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621440|gb|EFY18294.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623218|gb|EFY20060.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628508|gb|EFY25296.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633672|gb|EFY30412.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638520|gb|EFY35215.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640810|gb|EFY37459.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645326|gb|EFY41854.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651791|gb|EFY48163.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654312|gb|EFY50634.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659278|gb|EFY55526.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662721|gb|EFY58928.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667668|gb|EFY63828.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671918|gb|EFY68039.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677036|gb|EFY73100.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680302|gb|EFY76341.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685269|gb|EFY81265.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129978|gb|ADX17408.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323196181|gb|EFZ81340.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199328|gb|EFZ84422.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204786|gb|EFZ89782.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205918|gb|EFZ90881.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212719|gb|EFZ97534.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217245|gb|EGA01966.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222890|gb|EGA07243.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225572|gb|EGA09800.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232107|gb|EGA16214.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234634|gb|EGA18721.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238086|gb|EGA22145.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243311|gb|EGA27330.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248433|gb|EGA32368.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252539|gb|EGA36382.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255436|gb|EGA39202.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260838|gb|EGA44440.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267575|gb|EGA51058.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270995|gb|EGA54426.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623182|gb|EGE29527.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988596|gb|AEF07579.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 389 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 + + A + +++ R AV L D +A Y A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136 Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + NS SI + +++ KA L+++ + L Sbjct: 197 DRAMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 247 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351 +SE +L + + + V + L + I +A + A Sbjct: 248 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 307 Query: 352 -MKIAPRKEIF-LLL 364 ++ P +F L+ Sbjct: 308 QLQRHPTMRVFHKLM 322 >gi|323156206|gb|EFZ42365.1| tetratricopeptide repeat family protein [Escherichia coli EPECa14] Length = 1093 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|189236217|ref|XP_971516.2| PREDICTED: similar to AT30101p [Tribolium castaneum] Length = 913 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 16/170 (9%) Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 A +QQ A+ W +A LN + + + L + + ++ Sbjct: 739 ARLQQDEEAERWYQA--ALNAQPDHVPAH-------ITYGKLLAKNVSRTAEAEQWFRKA 789 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP-EIANIYTHLLSENTVGKL 311 +L + L S+ + ++A V+ EK ++ PH E+A + + G+ Sbjct: 790 QRLAPQEPSVYHHYGEFLASRRRYKEASVMYEKAAELRPHDYELAVAAATAMRQ--AGRH 847 Query: 312 KRALRLEE----INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + A R + S + I G +A + A+++ P Sbjct: 848 QEAERWYRTAVDLKPSDARSHTNLGAILHLNGKYSEAASSYKEALRLQPD 897 >gi|157155956|ref|YP_001463871.1| TPR repeat-containing protein [Escherichia coli E24377A] gi|157077986|gb|ABV17694.1| tetratricopeptide repeat protein [Escherichia coli E24377A] Length = 1124 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 654 >gi|160883803|ref|ZP_02064806.1| hypothetical protein BACOVA_01775 [Bacteroides ovatus ATCC 8483] gi|156110888|gb|EDO12633.1| hypothetical protein BACOVA_01775 [Bacteroides ovatus ATCC 8483] Length = 676 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189 + Y+ A E LE +L++ TR + + S + D +A KAL++ P W Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+V+ +++ A N+ + A I R+L + ++ + D Sbjct: 196 AARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249 Query: 250 IESLKLCDN 258 +L + N Sbjct: 250 DLALDIDPN 258 >gi|10434572|dbj|BAB14303.1| unnamed protein product [Homo sapiens] gi|10435092|dbj|BAB14485.1| unnamed protein product [Homo sapiens] gi|119630617|gb|EAX10212.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_g [Homo sapiens] Length = 564 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 197 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 256 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 257 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 316 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 317 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 375 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 376 RAIYELAI 383 >gi|302819283|ref|XP_002991312.1| hypothetical protein SELMODRAFT_448389 [Selaginella moellendorffii] gi|300140892|gb|EFJ07610.1| hypothetical protein SELMODRAFT_448389 [Selaginella moellendorffii] Length = 434 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 11/154 (7%) Query: 68 CPAMLFHM--LHKRNYDKGYK---ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 P+ KRN D+ + ++ L +IA + A S V + L Sbjct: 68 DPSAALRYSERSKRNADRATQYERSVMEALDAIAEGSYDKALSSQSKVLENFPKD---LA 124 Query: 123 YLLEVQI-ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD-LNSAQRYATKA 180 L Q A + + ++ + +L + R + +Y + S D + A+ A +A Sbjct: 125 SLKRAQAMAFSRGKSHLMLKFASQVLHVNRDRAY-MYGMLAFSLVENDRTDEAEVAARRA 183 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 L I W A+ + +++ AI F+ Sbjct: 184 LSIEKHDVWAQHALCHVFQERQQYKDAIMFMESN 217 >gi|255600764|ref|XP_002537530.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] gi|223516024|gb|EEF24853.1| o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] Length = 450 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 4/169 (2%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L+ +A A L + A +L + R G A+ + +A+ + Sbjct: 10 LDANHLMAAGDDAGAEHCYLQALALQPWHVAARANLGYLKERQGAEAEAEFHYRQAIALV 69 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 PD + + + K + A L A E L + Sbjct: 70 PDHAQLHQNLGALLFKEKRLTEAEASLRTAVSLAPESPTP----LSQLGAVLVCMHNEPE 125 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP 293 +L L + A + L+ Q + + +L+ W+ + P Sbjct: 126 GEDCYRRALALDPDHARAQFNLSYLLLRQARFDEGWRMLDARWQFDHFP 174 >gi|167534895|ref|XP_001749122.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772275|gb|EDQ85928.1| predicted protein [Monosiga brevicollis MX1] Length = 712 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 16/191 (8%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-----AKEWNRNRAILLIAR 232 K + +P ++ + ++A + N K + R L + Sbjct: 359 EKEIKENPHNYDAWFDYIRLAESEGDVAKARDIYERAIANVPLDQDKRYWRRYIYLWVYY 418 Query: 233 SL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 ++ E D + L+L + AA+ I Q + A +L + Sbjct: 419 AVFEELTAKDADRTRAVYQACLQLLPHKTFTFAKVWLYAAQFEIRQKNLKAARQLLGRSL 478 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQ 343 + P ++ Y L E + + R L N + ++ V +++ +G ++ Sbjct: 479 GLCPKDKLYKGYIELELE--LREFDRCRTLYNKYLEFNPATCQTWVQYAELEAVLGDYER 536 Query: 344 AHAKAMLAMKI 354 A A LA+ Sbjct: 537 ARAIFELAIDQ 547 >gi|113476762|ref|YP_722823.1| hypothetical protein Tery_3235 [Trichodesmium erythraeum IMS101] gi|110167810|gb|ABG52350.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101] Length = 734 Score = 41.1 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 66/168 (39%), Gaps = 11/168 (6%) Query: 123 YLLEVQIALA--ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LL+ Q + + A +++I +A +L + G+L+ A Y ++ Sbjct: 10 QLLK-QANQLKRAGRLDEAIALYYQVIEINPNFAWAYNNLGDALVKQGNLDEAVAYYFES 68 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L ++P++ W+ + + AI +L + K ++ + + L + Sbjct: 69 LKLNPNSAWLLYGLGEALAKQGNLEAAIEYLQKAIKTKPDFYKFYSCLGFILA----ANN 124 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE 284 ++ + + +SL+L N + ++ LI + +A +E Sbjct: 125 NLNEAVVNIYKSLRLNKNCWWSHYFLSQLLIEKGDLHEAFYNYAKAIE 172 >gi|332702647|ref|ZP_08422735.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552796|gb|EGJ49840.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 206 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 9/181 (4%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A + Q ++ + A ++ G + + +L+L + A + Sbjct: 7 DEARKTIEQAQRELEVLP--DAQAYYNQATAELYLGRIEDAASHFRHALRLKPDFAAAWV 64 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT-----HLLSENTVGKLKRALRLEE 319 +L+ K +AE ++ + + P++ Y HL + + Sbjct: 65 NLGGALLRLGKLEEAEAANKRAIEAD--PDLTAGYLNLGLIHLNRGEWEEAARIYEQALS 122 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++ + E+ + L+ ++D+A + M A+ P L A + Sbjct: 123 LDMLNPEAHASLGMAYLKTDNLDKAIEEGMKAIGQRPGFGAAYELVCAAYAEQGDNAAAN 182 Query: 380 Y 380 Sbjct: 183 A 183 >gi|322500179|emb|CBZ35255.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1569 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 27/204 (13%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRN 224 D A +A + P V E V +V + ++++ + A E + Sbjct: 1112 DPELAATLYERAAAVCPTYLEVAEVVADVFVQSGDYAKGSVYMKRVMRANPSAATEMHMR 1171 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVI 282 A L + + G + ++ L + + A+ A L + N + Sbjct: 1172 LARLGTGSAWDTMSHGQRMEVMEHLLKGLGVAPERVAAAFAAGVQSQLTNANNTNVVMSL 1231 Query: 283 LEKIWKVNPHPEIANIYTHLLSENT--------------VGKLKRALRLEEIN-KESVES 327 P + + SE+ L R R + + Sbjct: 1232 GNLA------PLLLDGVATATSEDAVCFATYVVQTRFQEPQLLNRMYRRALLRFPQHATI 1285 Query: 328 LVIVSKIALEMGSIDQAHAKAMLA 351 LV + + + G A A Sbjct: 1286 LVNYATLCMHSGCHTLARKYIAKA 1309 >gi|307182081|gb|EFN69459.1| Intraflagellar transport protein 172-like protein [Camponotus floridanus] Length = 1735 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 80/314 (25%), Gaps = 57/314 (18%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT- 152 + + + A H + V + + ++ A + A Sbjct: 954 HVQSGDWMRA---HQVAQEYMKSDEANQVLMRHAESLQQAGEFRHAEALYVAIGDYDAAI 1010 Query: 153 ---REFAVYSLYFE--SCRIGD--LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 R+ + D + A + LD + E + A +W Sbjct: 1011 AMYRKAGHRGDMIRLVAEHRPDLLQTTHAHLARE-LDAAGKPREAEEHFLG----AGDWR 1065 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IESLKLCDNSIMAS 263 A R++ + +L A K + + + L Sbjct: 1066 GA-------------VTAYRSVNMWEDALRVAKKASGEKAAQQVALMWARTLAPEL---- 1108 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 A+ L+ N + L+ + + + + TV + K + E Sbjct: 1109 --GARLLMRLN---YLDPCLQLACEAS----LFEWALEIAKYGTVDQKKEIHYRHAMALE 1159 Query: 324 SVESLVIVSKIA-LEMGSIDQA---------HAKAMLAMKIAPRKEIFLLLAQ--IEQAN 371 E ++ ++ G I +A A + ++ + +L E A Sbjct: 1160 D-EGRFAQAEKEFVQAGKIMEAVQMYIHNRDWESAEDVARSHSQEAVAQVLIARAAEAAE 1218 Query: 372 SHNTDKILYWTQSA 385 + A Sbjct: 1219 GQDYATAEALLLRA 1232 >gi|241765396|ref|ZP_04763368.1| Methyltransferase type 12 [Acidovorax delafieldii 2AN] gi|241364873|gb|EER59832.1| Methyltransferase type 12 [Acidovorax delafieldii 2AN] Length = 436 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 41/212 (19%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + + A LN+ + R + L G++ ++ S+ L Sbjct: 19 QIAKNDLKNAALTLNKAQAVVPNDPRVFMLA----GLMAEKSGNIKGAFEALRRSVSLAP 74 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----------------HPEIANIYT 300 + + A L QN+ ++A EK+ K+ P H E+A + Sbjct: 75 DWGPGLLELALLLARQNQFQEAVETAEKVAKLEPKNLQVLAGVIDIAHRAGHAEMAVRHL 134 Query: 301 ----HLLSENTVGK--LKR--------------ALRLEEINKESVESLVIVSKIALEMGS 340 L+ + + + L R L N ++LV + + G Sbjct: 135 RRGLELVPGDAMLRRLLARDLSEQGKHEESVAMWTTLVAENPADPQALVGRVQACIASGQ 194 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS 372 QA A + +AP ++ AQ+ + + Sbjct: 195 PAQALADTQALLALAPDDAVYQYYAQLARGET 226 >gi|259908340|ref|YP_002648696.1| tetratricopeptide repeat protein [Erwinia pyrifoliae Ep1/96] gi|224963962|emb|CAX55467.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|283478280|emb|CAY74196.1| Uncharacterized protein yciM precursor [Erwinia pyrifoliae DSM 12163] Length = 389 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 25/248 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R A+ L + G + A+ +S Sbjct: 83 GEVDRAIRIHQALMESDSLTYDQRLLAIQQLGRDYMAAGFYDRAEHMFGQLVDETDFRLS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W AI + K K A +L+ D+ Sbjct: 143 -----ALQQLLIIHQATSDWLNAIDAAERLIKLGKSRLGMEIAHFYCELALQAMSSDDLE 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297 + + NS SI + I++ + KA + ++E K + + Sbjct: 198 RAMSLLKKGEAADRNSARVSIMMGRIHIAKAEYAKAVQHLQRVIEQDKELVSETLEMLES 257 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y HL + R E N + + + ++ I + + A ++ P Sbjct: 258 CYQHLEQGPAW--VNYLERCVEENTGAA-AELYLAGILDQQDGAEAAQTYITRQLQRHPT 314 Query: 358 KEIF-LLL 364 +F L+ Sbjct: 315 MRVFHRLM 322 >gi|205374228|ref|ZP_03227027.1| YrrB [Bacillus coahuilensis m4-4] Length = 221 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 60/178 (33%), Gaps = 7/178 (3%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 L +Q+ E + A + ++ + +G+ A+ + KA+++ Sbjct: 6 LGIQVLQ-EGKMEEALKLFTEAIEENPGDSVGYINFGNVLSSVGETVRAKIFYEKAIELD 64 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P A A+ +++S A + + E + ++ D Sbjct: 65 PKAGAAYYALGNVLFQEEKFSEAKDQFEKAIRTGME--NGDVYFMFGFTMVQLD--QPKL 120 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + +++L + A +L + +A L + V P+ A+ Y +L Sbjct: 121 AMPYLQRAVELTPEDVEARFQYGLTLAGLEEIDEAVKQLLLV--VEQQPDHADAYYNL 176 >gi|162454729|ref|YP_001617096.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56'] gi|161165311|emb|CAN96616.1| hypothetical protein sce6447 [Sorangium cellulosum 'So ce 56'] Length = 947 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 52/165 (31%), Gaps = 22/165 (13%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 +E LL + A + + ++ + A L R+ D ++A + Sbjct: 152 DEVATRLLRA------GRDRDAIDIFKRVVDLDPNNPLAYLRLAEALIRVRDYDAAIQRF 205 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A ++ +++ A+ + + ++ + R I L+ Sbjct: 206 GTAAEL----------LLKL----GRRDDALKVVERLLQHRPDARFARMAAEIY--LDRG 249 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 D D +++ + K + A++ + KA + Sbjct: 250 DPSDGMSALTKLQIAFKENPKDLETLALLARAFDLLGQPAKAIEV 294 >gi|161523696|ref|YP_001578708.1| TPR repeat-containing protein [Burkholderia multivorans ATCC 17616] gi|189351540|ref|YP_001947168.1| hypothetical protein BMULJ_02743 [Burkholderia multivorans ATCC 17616] gi|160341125|gb|ABX14211.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia multivorans ATCC 17616] gi|189335562|dbj|BAG44632.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 607 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 16/181 (8%) Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K+ + + NR +A + + D + +L++ + + A++ L Sbjct: 204 LKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRRALQIRPDYLPAALM----LSQMG 259 Query: 275 KKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 +A I V +P+ +A +L + K+ + +++ + L+ Sbjct: 260 PAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLM 319 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQ 383 ++ I ++ +D A A +++ ++ + ++ LAQI N + W Sbjct: 320 ALALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYLAQI-AIEQGNDAQASQWLD 378 Query: 384 S 384 Sbjct: 379 K 379 >gi|332702514|ref|ZP_08422602.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552663|gb|EGJ49707.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 207 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVLAKEWSRAITFLNQKKKNAKEWN 222 + + GDL Y A P P V A + ++ AI Q K K+ N Sbjct: 69 AMQRGDLEGCLHYNEIAAKNMPLFP-VPYANMGFVHMQRGNVDEAIKAFKQAIK--KDAN 125 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +AI + +L KGD+ S + +L++ N A A + + KA Sbjct: 126 FVQAIASLGGALYM--KGDLDESEGYSKRALEIEANFGPALNNLALVELERGNHAKAREY 183 Query: 283 LEKI 286 +E+ Sbjct: 184 VEQA 187 >gi|257457795|ref|ZP_05622956.1| TPR domain protein [Treponema vincentii ATCC 35580] gi|257444845|gb|EEV19927.1| TPR domain protein [Treponema vincentii ATCC 35580] Length = 311 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 20/141 (14%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A + A E L + + +Y++ + GD+ +A+ Y + Sbjct: 170 RGMAASLLGDTDKAIEAFTQALAVNPSDFV-LYAVAENYKKKGDIQNAKLY------LFE 222 Query: 186 DAPWVTEAVVQQYVL---------AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +AV++ + A+ N + K+ N A L Sbjct: 223 TIKKTGDAVLEVRCRNQLGLLFLEENKPEEALEQFNTVLE--KDANSADA--HYGLGLIY 278 Query: 237 ADKGDMIASYHDAIESLKLCD 257 +GDMI + ++ +++L Sbjct: 279 EMQGDMIKARYEWRSAIRLNP 299 >gi|257086752|ref|ZP_05581113.1| hypothetical protein EFLG_00343 [Enterococcus faecalis D6] gi|256994782|gb|EEU82084.1| hypothetical protein EFLG_00343 [Enterococcus faecalis D6] gi|315027274|gb|EFT39206.1| tetratricopeptide repeat protein [Enterococcus faecalis TX2137] Length = 418 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 91/305 (29%), Gaps = 25/305 (8%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PAT 152 ++ A N+ A+ M ++ L L + L+ A + + +L+ P Sbjct: 10 ALQAENLAEAQLMFEEALKKD--DENTLADL--GETLLSLGFLEEAKQIFQQLLEQFPDA 65 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI---T 209 + L + +++ A Y K P +++ VQ ++ + + + Sbjct: 66 DGLNIP-LAEIAIENNEIDDAFIYLEK-------IPETSDSYVQSLLVTADLYQVLGIPE 117 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 K K A ++ A G + + ++ I A + Sbjct: 118 VSEAKLKEAANLMPEEPLIQFALGELYFTNGQFVEAITRYQSIVESGTAQISAISLNERL 177 Query: 270 ---LISQNKKRKAEVILEKIWKVNPHPE----IANIYTHLLSENTVGKLKRALRLEEINK 322 +A LE K + +A Y L + +L+ +N Sbjct: 178 GSSYSMLGDFEEAVPYLEAAVKEEQTDDRLFQLAFTYLQL--HENQKAIALFQQLKTLNP 235 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 + +++ E +D+A A + P + A H+ W Sbjct: 236 HYQSLYLYLAEALQEEEQLDEAKAVIEEGIAENPFQVELYQFASENAYRLHDIAGAENWL 295 Query: 383 QSALH 387 AL Sbjct: 296 LKALE 300 >gi|126654199|ref|ZP_01726000.1| hypothetical protein BB14905_09575 [Bacillus sp. B14905] gi|126589338|gb|EAZ83492.1| hypothetical protein BB14905_09575 [Bacillus sp. B14905] Length = 219 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 72/207 (34%), Gaps = 12/207 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A +++Y A + ++ + + D A+R+ KA+ + A Sbjct: 10 AFQDKRYEEAAQLFTKAIEAEPENAIGYVNFGNLLAVLEDTERAERFFQKAITVDETAAT 69 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y A+ ++ A+ Q K+ E A + + + Sbjct: 70 AYYGLANLYYNAERYAEAVKLYEQALKHHIEG----ADVYYMMGKCFERMENPKLALPYL 125 Query: 250 IESLKLCDN-----SIMASICAAKSLISQNKKRKAEVILEKIW-KVNPHPEIANIYTHLL 303 ++++ + + A + Q K ++ ++++E+ W + H + +Y + Sbjct: 126 QRAVEIAPEDTQIRLAYSIVLCALEMFEQGK-KELDLLIEQDWNNADAHYNLGVLYA-VS 183 Query: 304 SENTVGKLKRALRLEEINKESVESLVI 330 +E T + + + E ++ I Sbjct: 184 TEQTEDAMYHLKQAFTLQPEYDQARYI 210 >gi|31874611|emb|CAD98046.1| hypothetical protein [Homo sapiens] gi|117646410|emb|CAL38672.1| hypothetical protein [synthetic construct] Length = 914 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 72/190 (37%), Gaps = 8/190 (4%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + KK A+ + + + +L A++ + + +++ + + A I + Sbjct: 512 QIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGE 571 Query: 269 SLISQNKKRKA-EVILEKIWKVNPHPEIA--NIYTHLLSENTVGKLKRALRLEEINKES- 324 L+ NK KA E L+ + + ++ H+ + LK R E+N + Sbjct: 572 LLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHK 631 Query: 325 --VESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYW 381 + + VIV + + E+ +A + + + P + L + + + + W Sbjct: 632 LALFNSVIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMDDKKDNE-AEIW 690 Query: 382 TQSALHAMPD 391 + A+ D Sbjct: 691 MKKAIKLQAD 700 >gi|56962453|ref|YP_174179.1| hypothetical protein ABC0679 [Bacillus clausii KSM-K16] gi|56908691|dbj|BAD63218.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 648 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 12/137 (8%) Query: 126 EVQIALAERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + Q L Q A ++ + P + + +Y+ R D +A + L Sbjct: 203 DAQAYLRNDQLEAAKAAIDRAFQLFARDPD--LWHLKGVYY--LRNNDYRAALHMFQEKL 258 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 +SP P Q + K++ I +Q ++ + L + + + D Sbjct: 259 ALSPADPDGLLYSAQLHFHFKDFQSVIADCDQLLA----YHEHHVEGLFLKIKGHLELND 314 Query: 242 MIASYHDAIESLKLCDN 258 + ++ ++++L + Sbjct: 315 EVTAHQWIEKAIELHPD 331 >gi|87312286|ref|ZP_01094384.1| probable O-linked GlcNAc transferase [Blastopirellula marina DSM 3645] gi|87284990|gb|EAQ76926.1| probable O-linked GlcNAc transferase [Blastopirellula marina DSM 3645] Length = 322 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 56/143 (39%), Gaps = 13/143 (9%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + A + + + +GD + +++++ +++ A + A+ L Q K A Sbjct: 94 DHLNAAVYLGSGRMHEQQGDFDGAAKQYLKAIEEYPDNLYALLSYARLLDRQGKSPAALE 153 Query: 282 ILEKIWKVNPHPEIANIYTHL--------LSENTVGKLKRALRLEEINKESVESLVIVSK 333 +K HP+ A L ++ + + +A +E NK + ++ Sbjct: 154 YYQKA--AAAHPDSAVAMNDLGLCYLKSKRFDDAMSAIYKATTIEPENKRYRNN---MAS 208 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 ++ +++A ++ A AP Sbjct: 209 ALVDANRLEEAFSQLEYAHGAAP 231 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 59/161 (36%), Gaps = 8/161 (4%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + ++ A ++ ++ +A+ S R G +A Y KA PD+ Sbjct: 109 EQQGDFDGAAKQYLKAIEEYPDNLYALLSYARLLDRQGKSPAALEYYQKAAAAHPDSAVA 168 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + Y+ +K + A++ + + E R R +A +L +A++ +A Sbjct: 169 MNDLGLCYLKSKRFDDAMSAIYKATTIEPENKRYR--NNMASALVDANR------LEEAF 220 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 L+ + A L + + A V L + +P Sbjct: 221 SQLEYAHGAAPAHYNLGYLLYKRGDAQLARVHLNMAIEKDP 261 >gi|271962301|ref|YP_003336497.1| ATPase-like protein [Streptosporangium roseum DSM 43021] gi|270505476|gb|ACZ83754.1| ATPase-like protein [Streptosporangium roseum DSM 43021] Length = 1118 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 24/195 (12%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD A A +AL + W A + EW+ ++ + R Sbjct: 116 AIASGDGARALDLADRALAL-----WQGPAYAEF--ADAEWAEPEATRLEELRLVAVECR 168 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + R+ E + + ++ +++L +A A + + RKA L Sbjct: 169 AEARLTLGRNAEIELEQH-VRAHPLRENAVRL---LALAYYRAGRQADALAAIRKARETL 224 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 V+P P + + T + L A L + S A+ Sbjct: 225 AAELGVDPGPALRALETDI--------LAHAGSLNRQEPAAPGSP-----AAIRAPERAA 271 Query: 344 AHAKAMLAMKIAPRK 358 + A + APR+ Sbjct: 272 SRGAGEAAKRDAPRE 286 >gi|154339838|ref|XP_001565876.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063194|emb|CAM45394.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1412 Score = 41.1 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 23/202 (11%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRN 224 D A +A ++ P V E V +V + ++++ ++ + + + Sbjct: 955 DPRLAATLYERAAEVCPTYLEVAEVVADVFVQSGDYTKGFAYMKRVIRANPSAATEMHMR 1014 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + E G+ + ++SL + + AS AA++ + A I Sbjct: 1015 LARLGTGTAWETMSYGERMEVMEHLLKSLGVAPERV-ASAFAAEAKRLEGN---ANKINM 1070 Query: 285 KIWKVNPHPEIANIYTHLLSENTV--------------GKLKRALRLEEIN-KESVESLV 329 + N P + + +SE+ V L R R + + LV Sbjct: 1071 TMSLGNLAPLLLDGVASCMSEDAVCFATYVVQTRFQEMQLLNRMYRRALLRFPQHATLLV 1130 Query: 330 IVSKIALEMGSIDQAHAKAMLA 351 + + + G A A Sbjct: 1131 NYATLCMHSGYHTLARKYIAKA 1152 >gi|238064374|ref|ZP_04609083.1| serine/threonine protein kinase [Micromonospora sp. ATCC 39149] gi|237886185|gb|EEP75013.1| serine/threonine protein kinase [Micromonospora sp. ATCC 39149] Length = 774 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 33/117 (28%), Gaps = 5/117 (4%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL+++A ++ A + E L A A + + Sbjct: 554 HGLLALARSDVDDA--TARFDRAYGELPGEVAPKLALGYCAEQRGDAVEATRYYRAVWRR 611 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 + A + L GD +A ++ +S A V+ +W Sbjct: 612 DRSAASAAFGLARLRLAAGDREAAVQFLDGVPRVSRHYDAAQVAAVRVLA---DWLG 665 >gi|148654221|ref|YP_001274426.1| protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1] gi|148566331|gb|ABQ88476.1| Protein-glutamate O-methyltransferase [Roseiflexus sp. RS-1] Length = 490 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATK 179 +L Q L + + A E + IP A +L + G+L+ A + Sbjct: 331 HLDRAQALLDAGRLDDAMEV---LRTIPPNSSLAPRALTLVARVHANRGELDLAIAEVRR 387 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL+I + YV +W AI L + + + A++ ++ Sbjct: 388 ALEIDALRDDAYLLLGTMYVRQGQWHDAIQSLERARYLNPDA----ALVSYHLAMAYRQA 443 Query: 240 GDMIASYHDAIESLK 254 G + + +L+ Sbjct: 444 GKKELAAREFRSALR 458 >gi|30249569|ref|NP_841639.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] gi|30138932|emb|CAD85511.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 569 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 71/248 (28%), Gaps = 34/248 (13%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 AL GL+S ++ A K Q F + ++ +I + A + + Sbjct: 288 ALAIGLLSAELDDLGSAEKYFKRAL-QLGFEDTNTIHFNLGRIHEIAQHNAEAMDAYLRV 346 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYAT----------------KA--------LD 182 V + + R G + +A+RY +A Sbjct: 347 TGGERYIAARVRYAFLLAKRDG-IAAARRYLKTVQVENEQQRTQLLISEAQLLRDSGEFR 405 Query: 183 ISPDAPWV-------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + D ++ L + + L Q + E + A A Sbjct: 406 GAYDLLDAYLRKYPDQVELLYDRALMADKIGKLDVLEQDLRKLIELRPDNAHAYNALGYS 465 Query: 236 NADKG-DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 A++G + + ++++L + +K L+ + PE Sbjct: 466 LAERGLQLPEALALIQKAIELSPDDPYIMDSLGWVYYRMGDLKKGVNYLKLAFDTRSDPE 525 Query: 295 IANIYTHL 302 IA Y L Sbjct: 526 IAAHYGEL 533 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 4/61 (6%) Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 LK +L + E+ VS+ A A A+++ P E +A + Q Sbjct: 170 LKLVQQLAASYPDLPEAHFAVSQAAWSANEFKLAAKAMNQALELRPEWE----MAAVHQG 225 Query: 371 N 371 Sbjct: 226 Q 226 >gi|284928935|ref|YP_003421457.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A] gi|284809394|gb|ADB95099.1| Flp pilus assembly protein TadD [cyanobacterium UCYN-A] Length = 365 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 66/211 (31%), Gaps = 35/211 (16%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A +Q+ + L R D + A + + + P+ P + Sbjct: 123 GDNDNAATAYYYAVQLNPKSVKSYIGLGVVLLRKEDYDGAAEAYRRVMTLEPNNPNIFSI 182 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + KE+ +AI +L K R +L A +G + + + + Sbjct: 183 MGASLLQQKEFKQAIKYLKSAVKQFPRDTELRMLLATA----LLQQGQIFSGKEELRIAE 238 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 K+ ++ + A L QN +A I Sbjct: 239 KIDPKNLKIQLKIAGILEIQNNLEEALKI------------------------------- 267 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQA 344 R+ NK+S E+ + + +I + +A Sbjct: 268 YKRISYFNKQSSEAHMGIGRIQMAQKDFLRA 298 >gi|282899920|ref|ZP_06307881.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] gi|281195190|gb|EFA70126.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505] Length = 302 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 62/206 (30%), Gaps = 23/206 (11%) Query: 88 LYTGLMSIAAH---NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 L GL +IA + +A + + + + L L Q + A + Sbjct: 48 LNKGLKAIAEGKVQDAIIAFRQAAQLDPALAPAHYNLGLALR-QTGKLQ---PAADAFYQ 103 Query: 145 MMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 P + + E +L A Y AL + P + + L K Sbjct: 104 ATQADPQFASAFANLGGALLE---GNNLPLAIDYLKTALQLDPKLGFAHYNLGLARQLQK 160 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 +W +AI Q + N + + +G + + I+++ L N A Sbjct: 161 DWQQAIASFQQAIIYSP--NSAEPVYHLGNC--YLQQGKLELAKSTFIKAISLNSNYTEA 216 Query: 263 SICAAKSLISQNKK-------RKAEV 281 L Q + RKA Sbjct: 217 HYNLGLILFEQGQLQDSLSAFRKAAQ 242 >gi|229175069|ref|ZP_04302587.1| TPR domain protein [Bacillus cereus MM3] gi|228608437|gb|EEK65741.1| TPR domain protein [Bacillus cereus MM3] Length = 219 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205 >gi|320646340|gb|EFX15267.1| hypothetical protein ECO9389_06873 [Escherichia coli O157:H- str. 493-89] gi|320651520|gb|EFX19907.1| hypothetical protein ECO2687_14881 [Escherichia coli O157:H- str. H 2687] gi|320657231|gb|EFX25040.1| hypothetical protein ECO7815_13394 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662837|gb|EFX30169.1| hypothetical protein ECO5905_01061 [Escherichia coli O55:H7 str. USDA 5905] gi|320667641|gb|EFX34556.1| hypothetical protein ECOSU61_20648 [Escherichia coli O157:H7 str. LSU-61] Length = 1093 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|156364414|ref|XP_001626343.1| predicted protein [Nematostella vectensis] gi|156213216|gb|EDO34243.1| predicted protein [Nematostella vectensis] Length = 1072 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 52/368 (14%), Positives = 113/368 (30%), Gaps = 50/368 (13%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + + +L+ L + G + A + +AL I+ D P + Sbjct: 513 DKAEQLYKNILREHPNYVDCYLRLGCMARNRGQIYEASDWFKEALQINQDHPDAWSLIGN 572 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAI 250 ++ +EW + K N ++L + DK A+ Sbjct: 573 LHLAKQEWGPGQKKFERILKQPSTANDAYSLLALGNVWLQTLHAPTRDKAKERRHQDRAL 632 Query: 251 ----ESLKLCDNSIMAS-----ICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIA 296 + L+ ++ A+ I A K I + + R+A + +W +A Sbjct: 633 AMYKQVLRNDSRNLYAANGIGCILAHKGYIREARDVFSQVREATADVPDVWLN-----LA 687 Query: 297 NIYTHLLSENTVGKLKRALR-LEEINKES-VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +IY + ++ L + K VE ++ +++ G + + A + Sbjct: 688 HIYVEQKQYVSA--IQMYENCLRKFFKHHSVEVMLYLARAYYRAGKLKDCKRVLLKARHV 745 Query: 355 APRKEIFL---------LLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVW 405 +P I L L I +A + +L A + W+S G Sbjct: 746 SPNDTILLFNVSLVQQKLATGILRAEKSSLKVVLGAVGELEQAQRNFTWLSRHGDRM--- 802 Query: 406 LPLSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSIKK 465 W + + A D+ + L ++ ++++ Sbjct: 803 --------KFD-LAWAAYESRHTSDLLSQAQYHVSRARKLDEQEQELRRKQEAEKEALRR 853 Query: 466 VSSFEDST 473 E+ + Sbjct: 854 SKEEEERS 861 >gi|76803894|gb|ABA55837.1| fimbiral biogenesis and twitching motility protein [Vibrio sp. DAT722] Length = 238 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 24/201 (11%) Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASY 246 A+ Y+ RA L Q +A ++ R ++ ++ DK + + Sbjct: 36 AESRIALGLGYLENGNMIRAHDNLQQALAHAPQYYRTQLSMAHYYETVGEVDKAESMYKR 95 Query: 247 HDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKI-----WKVNPHPEIANIY 299 + K ++ L Q K +A+ + + + + P + Sbjct: 96 SL-RQHTKN------GNVLNNYGTFLCKQGKYEQADKMFTRAIEQPYYYLIPASYENAAF 148 Query: 300 THLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI---- 354 L S+ + K R + + +S++ ++K+ ++ G A + M + Sbjct: 149 CALKSQQP-ERAKYYFERAIDHDPHRPKSILQLAKLEIDDGEYTDARIRLMRFHQTYGLK 207 Query: 355 APRKEIFLLLAQIEQANSHNT 375 P L+ ++E+A ++ Sbjct: 208 KP---SLQLMVELERAAGNDA 225 >gi|67923685|ref|ZP_00517153.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] gi|67854485|gb|EAM49776.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501] Length = 530 Score = 41.1 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 86/281 (30%), Gaps = 21/281 (7%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148 GL+ A + SY + L + +++ A + + Sbjct: 248 KGLIHTQQAEYEAA--IASYDKALQLTPDYDLAWNNRGIALANVGRFDKAIASYDKALQL 305 Query: 149 IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P E + G + A KAL + PD A Sbjct: 306 TPDKDEAWCNRGIAL--FNRGRSDEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDEA 363 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 I ++ + + + +A +L G + ++L+L + A Sbjct: 364 IASYDKALQLKPDDH--QAWNNRGYALRQL--GRFDEAIASYYKALQLKPDYYEAWHNRG 419 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEE------I 320 +L + +A +K ++ P+ + + + KL R + + Sbjct: 420 IALRKLGRFDEAIASYDKALQLK--PDYHQAWHN--RGIALRKLGRFDEAIASYDKALQL 475 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + ++ +G +D+A A A+++ P +EI+ Sbjct: 476 KPDDHQAWYNRGIALGNLGRLDEAIASFDKALQLKPDEEIY 516 >gi|301615540|ref|XP_002937236.1| PREDICTED: interferon-induced protein with tetratricopeptide repeats 5-like [Xenopus (Silurana) tropicalis] Length = 515 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 20/157 (12%) Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE--AVVQQYVLAKEWS----RA 207 +Y Y E A+ KAL + PD P + A+V + ++ + Sbjct: 174 LLTLYGKYCE--------RAKECFEKALVLDPDNPELNSGYAIVMYRIESQHYRVYGTGE 225 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 T L K A N N ++ +L+ G E+L+ +S AA Sbjct: 226 CTSLEL-LKRAVTLNENDTVIKALLALKYVYLGQAEEGEKIIEEALRQTPDSPYLLRYAA 284 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY 299 K K A IL+K P H +I Y Sbjct: 285 KFYRIVGKTGDAITILKKALNQTPTSCSLHHQIGICY 321 >gi|262280063|ref|ZP_06057848.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262260414|gb|EEY79147.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 569 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 102/323 (31%), Gaps = 35/323 (10%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 T + + + + + + H+F L + + ALA A ++ Sbjct: 16 STTFLLLGSMSSHVYARPVQETYAVHSFDQ-ALEQTMVAEFALAYDDIPNALHNYTVLAI 74 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + +L + D +A AT + P + + E+ A Sbjct: 75 KSNSTSIKQRALDV-ALEYNDFQAALNIATHWVAQEPKDVPALFYLSHIALKTHEYQLAA 133 Query: 209 TFLNQKKKNAKEWNRN-------------RAILLIAR---------------SLENADKG 240 L++ K + R +LL A + A G Sbjct: 134 ETLDKILKIDPTADLEQILASIAPENAQDREVLLTALRSSSEKDNPSILALIANLEAQNG 193 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVNPHPEIAN 297 + ++ + ++L+ + A LI+ + + A K +K N +A Sbjct: 194 QLESALTNINKALRRRPKVTSFILMKANLLIALSDQEGALKWYAKSSRKYKKNLDIRLAE 253 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 I + + L++ + E N ++ E+L I ++++ D+A + A Sbjct: 254 IRYLIQLNQSQLALEKLENVIEANPKAEEALFIAGLTSIDLKQYDKAEQYLVDLRNSAKY 313 Query: 358 K--EIFLLLAQIEQANSHNTDKI 378 + + L E+ + + K Sbjct: 314 QNEAYYYLAINAERKQHYESAKA 336 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321 A+ L K+ A +L++ K P PE+ IY +L KL K +L ++ Sbjct: 389 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 446 Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 S L + +AL+ + +A A A++ AP + L Sbjct: 447 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 488 >gi|296825692|ref|XP_002850854.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480] gi|238838408|gb|EEQ28070.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480] Length = 735 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 56/156 (35%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV------TEAVVQQYVL- 200 Q P Y + GD + A ++ +AL + PD+ + + +++ Sbjct: 434 QDPDAIFLRGRLFYLQ----GDNDQAVKHFKRALSLDPDSSKIIKCLRMVQKLLRIKDEG 489 Query: 201 -----AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++++ AI + + + LL R+ + + + D ++L+ Sbjct: 490 NAAFKSRKYREAIDLYTRGLEVDPSNKDINSKLLQNRAQAHININQFEKAIDDCTKALEC 549 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + A AK+ +A L+ I + +P Sbjct: 550 DPTYLKARRVRAKAYGGAGNWDEAVKELKDIAENHP 585 >gi|119629446|gb|EAX09041.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_b [Homo sapiens] Length = 524 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ E+++L Sbjct: 243 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKY 298 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 299 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 351 >gi|119581193|gb|EAW60789.1| DnaJ (Hsp40) homolog, subfamily C, member 7, isoform CRA_b [Homo sapiens] Length = 443 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C + A ++ Sbjct: 128 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 183 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 184 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 243 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R N+ + + D ++KL D I A + A+ + + +A EK+ Sbjct: 244 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 303 Query: 287 WKVN 290 ++ Sbjct: 304 YQTE 307 >gi|312622201|ref|YP_004023814.1| hypothetical protein Calkro_1131 [Caldicellulosiruptor kronotskyensis 2002] gi|312202668|gb|ADQ45995.1| Tetratricopeptide TPR_1 repeat-containing protein [Caldicellulosiruptor kronotskyensis 2002] Length = 294 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 66/204 (32%), Gaps = 8/204 (3%) Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L G+ A+ L P + + + +A + + Sbjct: 1 MRGDLVLHYLESGNYKKAREVIQNILQEDPLNAEAYIQLSAIELESGNLKKAEDYAKEAL 60 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K A+L + D + +++LK+ + + C ++ LI Sbjct: 61 KIDSNNKVAWAVL----GQIYHHQKDYSQAERCYLQALKIDNVYVEVLACYSELLIETGF 116 Query: 276 KRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 K IL+ + P ++ + +L + N K +L + + ++ Sbjct: 117 IEKGLEILKYAKSLEPTNDLILENEFFVNLYNRNFEKANKTIKKLFTSSGKIGSVYKLLV 176 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + G+ +A+ A LA + P Sbjct: 177 LYEVNRGNFKKAYNYAKLAWQEYP 200 >gi|289667598|ref|ZP_06488673.1| putative secreted protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 551 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 85/249 (34%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L A+ Sbjct: 302 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 361 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 362 ATADDDARRDAYVLEAELHQRANDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 417 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D++ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 418 DDVLRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 477 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 478 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 533 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 534 RLDPDNRAL 542 >gi|213967226|ref|ZP_03395375.1| TPR domain protein [Pseudomonas syringae pv. tomato T1] gi|301381038|ref|ZP_07229456.1| TPR domain protein [Pseudomonas syringae pv. tomato Max13] gi|302060380|ref|ZP_07251921.1| TPR domain protein [Pseudomonas syringae pv. tomato K40] gi|302134870|ref|ZP_07260860.1| TPR domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928068|gb|EEB61614.1| TPR domain protein [Pseudomonas syringae pv. tomato T1] Length = 575 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 89/275 (32%), Gaps = 39/275 (14%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 +F + LV LL ++A +++IA + + + Y + +G S Sbjct: 45 YGSFTQDTLVSLLSAELAGQRNRFDIALDNYVTQAVKTQDPGVSERA-YQIAEYMGADQS 103 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---------- 222 A A +P A Q A + ++ ++ + + + + Sbjct: 104 ALETALIWARNAPSDLEAQRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAAE 163 Query: 223 --------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 L+ ++L GD S +E + I Sbjct: 164 TDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAP 222 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALRL 317 + A+ L S N+ ++A +LEK K +P+ + Y +L E + L Sbjct: 223 ILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAAL 280 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + E ++ + LE + ++A + Sbjct: 281 LQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 315 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 K+ Q ++ L + L + L + + A LE ++ A + A +L Sbjct: 273 AKVQFAALLQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 331 Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 D SA YA + PD V + A L++ + ++ Sbjct: 332 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 389 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + + + ++LK + A +N + E Sbjct: 390 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 446 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338 L I K P +A + + A L E + L + + + Sbjct: 447 LRTIIKREPENAMALNALGYTLSDRTTRYTEARELIEKAHQISPDDPAVLDSLGWVNYRL 506 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G++D A A++ P E+ L ++ A + + AL PD Sbjct: 507 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 558 >gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 799 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 83/280 (29%), Gaps = 39/280 (13%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER-QYNIAHEK 142 G + L + +A + VS + + + I+ E A Sbjct: 115 GRELL---MKPAGKGEEVVAVEERKRVSAETSLSDS---------ISSIENSDSEQAEVW 162 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 + GD A KAL PD + Sbjct: 163 FN-------------RG--NQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRGVALADLG 207 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 ++ AI ++ + ++++ R + AD G+ + + ++L++ + A Sbjct: 208 KYEEAIANYDKALQIQPDFHQ----AWYNRGVALADLGEYEEAIANYDKALQIQPDFHQA 263 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRL 317 +L + +A +K ++ P+ + + + Sbjct: 264 WYNRGVALADLGEYEEAIANYDKALQIQ--PDKHEAWYNRGVALGNLGKYEEAIANYDKA 321 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +I + ++ + ++G ++A A A++ P Sbjct: 322 LQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPD 361 >gi|188991867|ref|YP_001903877.1| hypothetical protein xccb100_2472 [Xanthomonas campestris pv. campestris str. B100] gi|167733627|emb|CAP51832.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas campestris pv. campestris] Length = 396 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 10/142 (7%) Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K + + R R +L++ +G +Y E KL + A Sbjct: 149 RSKSDQIIFKRLR------EALQHIKEGSYDIAYEILEECQKLSPEYYEVARIFAFFHQK 202 Query: 273 QNKKRKAEVILEKIWKVNP-HPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESL 328 + +A E + P P++ + + ++ +++ +++ S E Sbjct: 203 RGNYTEARENYELAIALAPDTPQLLFWFGKFIMTCEQDLDSAIQKFEAAHKLDSGSPEIS 262 Query: 329 VIVSKIALEMGSIDQAHAKAML 350 V +++ + S D+AH Sbjct: 263 VNLARAQMIQHSFDRAHQLLEQ 284 >gi|161525096|ref|YP_001580108.1| cellulose synthase domain-containing protein [Burkholderia multivorans ATCC 17616] gi|189350160|ref|YP_001945788.1| hypothetical protein BMULJ_01316 [Burkholderia multivorans ATCC 17616] gi|160342525|gb|ABX15611.1| cellulose synthase operon C domain protein [Burkholderia multivorans ATCC 17616] gi|189334182|dbj|BAG43252.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 1313 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 19/195 (9%) Query: 70 AMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126 A L R D Y A GL ++A ++ A + + ++ E + L Sbjct: 289 AALDRQRDARRRLERDPDYIAQQRGLQALARGDLAAAEPLLTRAARGRADDAEAVGGLGL 348 Query: 127 VQIALAERQYNIAHEKLEM---MLQIPATREFAV------YSLYFESCRIGDLNSAQRYA 177 ++ L E +++ A + + + + L + A + Sbjct: 349 LR--LREGRHDEARALFARAATLATDQRGKWQGLARTAQFWGLLAQGRDAASAGRAAQAE 406 Query: 178 TKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQ--KKKNAKEWNRNRAILLIAR 232 A P +A + + ++W+ A L + ++ + L A Sbjct: 407 RAARAALAMQPDSADAKLQLADALLAQRDWAGAEPLLRELLAARSPRIAAVRDTATLYAN 466 Query: 233 SLENADKGDMIASYH 247 + G ++ + Sbjct: 467 TGRAEQVGPLLEALQ 481 >gi|119897366|ref|YP_932579.1| tetratricopeptide repeat protein [Azoarcus sp. BH72] gi|119669779|emb|CAL93692.1| conserved hypothetical transferase protein [Azoarcus sp. BH72] Length = 391 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 66/191 (34%), Gaps = 15/191 (7%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A ++++ R A+ L + + G L+ A+ K L + Sbjct: 84 GETDRAIRLHQLLVDRDDLNEDQRLQALGELGQDFLKAGLLDRAETVFLK-LRDTRANDV 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHD 248 +++ Y K+W++AI + + W + A + Sbjct: 143 ALRYLLEIYQQEKDWAKAIEIARALPDHEEAMWRKEVASFHCELATTALADSRFPDVRRH 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE--- 305 E+L + + + AS+ +Q + A + WK + +Y L +E Sbjct: 203 IDEALAINRSCVRASLIEGDLYAAQGRDEDAL----EAWKRIESQD--PVYLSLAAERVM 256 Query: 306 NTVGKLKRALR 316 + G+L R + Sbjct: 257 DAYGRLGRVEQ 267 >gi|302342025|ref|YP_003806554.1| hypothetical protein Deba_0588 [Desulfarculus baarsii DSM 2075] gi|301638638|gb|ADK83960.1| TPR repeat-containing protein [Desulfarculus baarsii DSM 2075] Length = 438 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 9/140 (6%) Query: 262 ASICAAKSLISQNKKRKAE---VILEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRA-L 315 A + L+ + +A + K W P + A +Y + + K Sbjct: 15 ALAHEGQRLLRTGRANEAMDAFRAMVKGWPQQPEGYLGMAAVYQAMSLRLEAAREKAIGQ 74 Query: 316 RLEEI--NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 L + + E + + + V++ ++ D A A LA+++AP + L LA ++ Sbjct: 75 GLTHLATHPEDLRARLEVAEALMDKEMFDWAAHHADLALRLAPEDQKVLRLAARAHRRNN 134 Query: 374 NTDKILYWTQSALHA-MPDP 392 N K + + AL DP Sbjct: 135 NHRKAVVALRRALRQDPLDP 154 >gi|242006797|ref|XP_002424231.1| smile protein, putative [Pediculus humanus corporis] gi|212507600|gb|EEB11493.1| smile protein, putative [Pediculus humanus corporis] Length = 963 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 90/240 (37%), Gaps = 27/240 (11%) Query: 134 RQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A E E L P Y+L G + A Y KAL+ PD Sbjct: 576 NRTKEAQEVYERALFYDNNNPDI----YYNLGVVFLEQGKASQALAYLDKALEFDPDHEQ 631 Query: 190 V---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++Q+ + A L + K+ R + + D D+ + Sbjct: 632 ALLNSAILLQELGRVELRKIARDRLLKLL--NKDATNERVYFNLG--MLAMDDHDVSGAE 687 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIY 299 H +++L D+ A A L ++ +A L + V HP+ + +IY Sbjct: 688 HWFRLAVQLKDDFRSALFNLALLLADDHRPLEAAPFLNQ--LVRYHPDHVKGLILLGDIY 745 Query: 300 T-HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 ++ + R ++ ++ E+V+ L + + +E G++ +A A+K+AP + Sbjct: 746 INNIKDLDAAESCYR--KILKLEPENVQGLHNLCVVFVERGNLQKAEGCLKQALKLAPNE 803 >gi|195108155|ref|XP_001998658.1| GI24092 [Drosophila mojavensis] gi|193915252|gb|EDW14119.1| GI24092 [Drosophila mojavensis] Length = 498 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 63/202 (31%), Gaps = 12/202 (5%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA--TREFAV 157 L+ + Y + N YL + LA + A + +L++ T + Sbjct: 58 GQLSDALTHYHAAVEGDPNNYLTLFKRGTVYLALGKTRFAIQDFSRVLELKPDFTAARSQ 117 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + GD + A + L P V E + ++W LN + Sbjct: 118 RGIV--HMKSGDYDHALQDFELVLREEPQNSLVLEHYARVRPAKEQWELVQRLLNNNDEQ 175 Query: 218 AK--------EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 E + ARS D +++ D + +L +S A+ Sbjct: 176 NAIGMITQLLEISPWSVTFRQARSDAYLKTNDPLSAIADLRQVNRLSQDSTEGHYNIAQL 235 Query: 270 LISQNKKRKAEVILEKIWKVNP 291 L + A + + K +P Sbjct: 236 LYNIGHATNALKEIRECLKFDP 257 >gi|195117658|ref|XP_002003364.1| GI17875 [Drosophila mojavensis] gi|193913939|gb|EDW12806.1| GI17875 [Drosophila mojavensis] Length = 851 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 68/206 (33%), Gaps = 18/206 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R GD + ++ A+ I+P P + + A L + Sbjct: 488 QRNGDWQNEEQLFRSAIAINP--PKALGNLGSVLSSQGRYEEAKLALQSALAHRPTM--- 542 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS--QNKKRKAEVI 282 A + + + + A+ +++L A + A +L++ Q ++ +A + Sbjct: 543 -ADAHFNLGIVHQQQQNYTAALLCYRRAIQLRPQLAPAYVNLATTLLAWDQGRQEEAAAV 601 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 L ++ H S + + L+L +++ S + + + + ++ Sbjct: 602 LLAGARLPGH------GVRDRSAHEAARHSAYLQLSALHRSQGRSQLAMEVLNEALDTLP 655 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIE 368 + + + L ++E Sbjct: 656 LERRNQRAMLH----QRLAALHVELE 677 >gi|78188708|ref|YP_379046.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3] gi|78170907|gb|ABB28003.1| TPR repeat [Chlorobium chlorochromatii CaD3] Length = 706 Score = 41.1 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 26/242 (10%), Positives = 72/242 (29%), Gaps = 10/242 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + N A E ++++ A +L GD + A+ +AL +P Sbjct: 21 HARQLRKQGMLNEAIEAFREVIELQPDYVAAYNNLANALQAQGDSDGAEAVYQQALHYAP 80 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P + + +E+ AI + ++ + + + +G+ A+ Sbjct: 81 MLPVLHCNYGSLLLARQEYDAAIKSYQKALTLQADFF----LAYTNLAKAYSVRGNFFAA 136 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI----LEKIWKVNPHPEIANIYTH 301 +L+L + + +A L+ + + Sbjct: 137 LQTYKAALRLKPQDAELYLDCGQLYQQYGFIPQAVKYYRRSLQLAASARGYNALGAALQD 196 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + + L ++ + ++++ +G ++ A + + Sbjct: 197 -WGNLKLARASYHRAL-KLQPDFDLPQYNLAQLYENLGELETARRYYEQTLTVDAENAKL 254 Query: 362 LL 363 LL Sbjct: 255 LL 256 >gi|332968797|gb|EGK07845.1| tetratricopeptide TPR_2 protein [Psychrobacter sp. 1501(2011)] Length = 694 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 5/154 (3%) Query: 218 AKEWNRNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 +E ++ A + R+LE + D S A++ + I A A + + Sbjct: 192 KQEALKDDATAVFERALELSLLYDMPKESLAFALQWQQQNPEHIPALFYVAHLALKAHDY 251 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 + +L +I + +++ I + N + L + + ++V + L Sbjct: 252 ELSGKVLTEILDYDTQADLSEILIGIYPTNQKDQRSLLETLLSL-PKHDNPSLLVMQAGL 310 Query: 337 --EMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQI 367 ++G D A A+K P F++L A I Sbjct: 311 MSQLGQPDIALVSVNRALKFQPDNAPFIVLKADI 344 >gi|328866185|gb|EGG14571.1| TPR repeat-containing protein [Dictyostelium fasciculatum] Length = 756 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 25/216 (11%) Query: 169 DLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 D+ A+ +P W+ A ++ Y + S A + Q + Sbjct: 274 DIKKARLLFRSVTQTNPKHAPGWIASAKLEMYA--GKLSVARKIIAQGCLECPDDEEVW- 330 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +ENA+ + +++K+ +SI + AA +L K +K +L + Sbjct: 331 -------IENANLQTPDNAKLLLAQAVKVIPHSIKIWLYAA-ALEKDVKMKK--RVLRRA 380 Query: 287 WKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 + P+ ++ L E+ L RA+ N + + ++ LE D+A Sbjct: 381 LEFVPNSVKLWKEAVELEEPEDAKILLGRAVECVGDNVD-----LWLALANLES--YDRA 433 Query: 345 HAKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKIL 379 A P EI++ AQ+E+A +H + Sbjct: 434 REVLNKARTAIPTSIEIWIAAAQLEEAVNHTENVAR 469 >gi|313500589|gb|ADR61955.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 257 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 4/106 (3%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 +S L L Q +N A LE +I +Y L Sbjct: 141 AAGGLSADEQLDGPVLALLTTAQTQQGSGDFNGAASSLERAQRIAPREPQVLYRLAQVRL 200 Query: 166 RIGDLNSAQRYATKALDIS---PDA-PWVTEAVVQQYVLAKEWSRA 207 GD A++ A +AL + P + + Q + + A Sbjct: 201 SQGDAAQAEQLARRALTYANGRPSLQAELWNTIAQAREKQGDSAGA 246 >gi|310767736|gb|ADP12686.1| tetratricopeptide repeat protein [Erwinia sp. Ejp617] Length = 389 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 78/248 (31%), Gaps = 25/248 (10%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYA-----TKALDIS 184 + + A + +++ R A+ L + G + A+ +S Sbjct: 83 GEVDRAIRIHQALMESDSLTYDQRLLAIQQLGRDYMAAGFYDRAEHMFGQLVDETDFRLS 142 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMI 243 + ++ + +W AI + K K A +L+ D+ Sbjct: 143 -----ALQQLLIIHQATSDWLNAIDAAERLIKLGKSRLGMEIAHFYCELALQAMSSDDLE 197 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA----EVILE--KIWKVNPHPEIAN 297 + + NS SI + I++ + KA + ++E K + + Sbjct: 198 RAMSLLKKGEAADRNSARVSIMMGRIHIAKAEYAKAVQHLQRVIEQDKELVSETLEMLES 257 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y HL + R E N + + + ++ I + + A ++ P Sbjct: 258 CYQHLEQGPAW--INYLERCVEENTGAA-AELYLAGILDQQDGAEAAQTYITRQLQRHPT 314 Query: 358 KEIF-LLL 364 +F L+ Sbjct: 315 MRVFHRLM 322 >gi|310822924|ref|YP_003955282.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395996|gb|ADO73455.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 271 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 14/199 (7%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + E G L+ A + KA+++ P + + + Y K + A+ K Sbjct: 17 RGI--ELADRGWLDEAIKEFKKAIELDPSSAHAHDNLATVYAEKKLFREALAEYLTALKL 74 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E L S A+ + + E+++L A + + Q + Sbjct: 75 EPESATAHYNLACFLSTHAAEM-----AVEEYKEAIELDPEYPDAHLNLGLTYADQGRVE 129 Query: 278 KAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A L+ + P E+A + + + + + + +++ E+ + + Sbjct: 130 EAMRELQTAIELDAQDAFPRHELAA--LQMDEGDYRSAITQLKEVVRLEQDNFEAHLDLG 187 Query: 333 KIALEMGSIDQAHAKAMLA 351 + G +A A Sbjct: 188 ICYAQKGFYAEAERAYEKA 206 >gi|300115107|ref|YP_003761682.1| tetratricopeptide repeat-containing protein [Nitrosococcus watsonii C-113] gi|299541044|gb|ADJ29361.1| Tetratricopeptide TPR_2 repeat protein [Nitrosococcus watsonii C-113] Length = 580 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 12/171 (7%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLEM 145 L G + I A A M Y + ++ LL + A + +IA + L Sbjct: 403 LAEGEILINAGRYKEA--MSHYDKALQSRPDD--TNLLYARALVAENLGRLDIAEQDLRR 458 Query: 146 MLQIPATREFAVYSL-YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 ++ + A+ +L Y + R G L A RY ++A+ + P+ ++ +++ Y ++ Sbjct: 459 VITLEPGNAEALNALGYTLADRTGRLEEALRYISRAMKLKPNNAFILDSMGWVYYRLGDY 518 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 +A +L + + K+ + KGD + +LK+ Sbjct: 519 DKAEKYLREAMELRKDPE-----IAAHLGEVLWAKGDKAGARQVWQHTLKM 564 >gi|189219505|ref|YP_001940146.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] gi|189186363|gb|ACD83548.1| TPR repeats containing protein [Methylacidiphilum infernorum V4] Length = 246 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 60/164 (36%), Gaps = 27/164 (16%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 +L + ++ + +++ +L A + AA+ + + + KAE L K++K Sbjct: 60 AYQDALVAFKRLNVDEAQKAILKAQELKPKDPRAIVLAARIFLQKKEYNKAEKELYKVFK 119 Query: 289 VNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVE------------SLVIV 331 + P+ + Y +L ++ L R + + + E V Sbjct: 120 IQ--PDYSPAYQYLGEVFYAKKDYKEALYRFEQAALHDSSNKEILLKRIYCMIGLGRVDS 177 Query: 332 SKIALE-MGSIDQ-------AHAKAMLAMKIAPRKEIFLLLAQI 367 ++ + + + D+ A A +K ++ L A+I Sbjct: 178 AESLIAGLSAFDESSPGYYFAKAALCRVLKKYNEEKSLLDTARI 221 >gi|156045017|ref|XP_001589064.1| hypothetical protein SS1G_09697 [Sclerotinia sclerotiorum 1980] gi|154694092|gb|EDN93830.1| hypothetical protein SS1G_09697 [Sclerotinia sclerotiorum 1980 UF-70] Length = 836 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 70/211 (33%), Gaps = 14/211 (6%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D A R +A ++P + ++V+ +E+ +A+T ++A +R Sbjct: 622 DHEQALRCFKRATQLNPKFAYAFTLQGHEHVMNEEYDKALT----SYRHAMAVDRRHYNA 677 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 G+ ++ + K+ + + + + K A +K + Sbjct: 678 YYGVGKVYEKMGNYDKAFIHFEAASKINPTNAVLLGLMGSVVDKKGNKALALAYFKKAIE 737 Query: 289 VNPHPEIAN------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++P + + T E+ + +LK L + ++ ++ + Sbjct: 738 LDPKSALTRFKKARCLMTMGNMEDALEELKILKDLA---PDEAMVHFLLGRLYKSIKQKG 794 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSH 373 + +A+ + P+ + IE Sbjct: 795 ASVRHFTIALNLDPKASQ-QIKEAIESLEQG 824 >gi|149179248|ref|ZP_01857813.1| TPR repeat protein [Planctomyces maris DSM 8797] gi|148841927|gb|EDL56325.1| TPR repeat protein [Planctomyces maris DSM 8797] Length = 609 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 46/160 (28%), Gaps = 10/160 (6%) Query: 204 WSRAITFLNQKKKNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 W L ++ + R I+ + G + S+++ Sbjct: 433 WE--RKDLQASLRHFEASARLLPQNHIVYEKWGSLLREMGQTDEAVQKLQRSIEINPQYA 490 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----THLLSENTVGKLKRALR 316 A + S+ KA + E + P + A Y L + + R Sbjct: 491 PAYFTLGRIWESRGDLDKARELYEATLQHAPGFDSA-WYNLGLIDLKAGRQPEAIAAFQR 549 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 EIN + + I L + QA A+ I P Sbjct: 550 ALEINPRHASAHNNLGVIYLFQQNFSQAKFHFEEALHIDP 589 >gi|115523116|ref|YP_780027.1| TPR repeat-containing protein [Rhodopseudomonas palustris BisA53] gi|115517063|gb|ABJ05047.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris BisA53] Length = 735 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 8/218 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R G+LN A+ +A +P V A+ + + + W A +Q +K N + Sbjct: 390 QRRGNLNHAEDILAEASSRNPTDTNVLSALARVRLARQNWIGAQEIADQIRKVGDNQNIS 449 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 IL + + + + N+ + + ++ ++ + +AE L Sbjct: 450 DNIL----AASLTGQKKYDEAIGLLQSAYSANPNATQSMLGLVRAYVAAKQTDRAEAFLR 505 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKR---ALRLEEINKESVESLVIVSKIALEMGSI 341 + +P A + L+ + K + E N + ++ + + Sbjct: 506 AVLNASPQNVQARVTLGLVQLASNAPAKAEATFKAVIEENAKDPAGYRALADLYGRQNKL 565 Query: 342 DQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378 + A ++ AP L LA +++A I Sbjct: 566 NDALQILKAGLQQAPNDVALRLGLAGLQEATRDIDGAI 603 >gi|323941189|gb|EGB37374.1| tetratricopeptide [Escherichia coli E482] Length = 1093 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|312074136|ref|XP_003139835.1| hypothetical protein LOAG_04250 [Loa loa] gi|307765001|gb|EFO24235.1| hypothetical protein LOAG_04250 [Loa loa] Length = 659 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 5/107 (4%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A + R G+ +A ++ KAL I Y +++ A T L+ Sbjct: 259 VAKRG--VDKIREGENATAVQHFNKALSICEKNIEALVGRAAAYANMGQYNLAETDLDAA 316 Query: 215 KKNAKEWNRNRAIL---LIARSLENADKGDMIASYHDAIESLKLCDN 258 R + L+ + + G + +SL + D+ Sbjct: 317 LAINASHTNARNYMIETLLQEAKRLEEAGKKDEAKTKYEKSLTIKDD 363 >gi|26390368|dbj|BAC25886.1| unnamed protein product [Mus musculus] Length = 607 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 459 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 514 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 515 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 567 >gi|78046533|ref|YP_362708.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034963|emb|CAJ22608.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 562 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + +LY + L A+ Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQVSEARLRTASALYELGRKPEALAEARALQGD 372 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 429 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 545 RLDPDNRAL 553 >gi|87125272|ref|ZP_01081118.1| probable tpr domain protein [Synechococcus sp. RS9917] gi|86167041|gb|EAQ68302.1| probable tpr domain protein [Synechococcus sp. RS9917] Length = 606 Score = 41.1 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 74/257 (28%), Gaps = 21/257 (8%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A ++ A L+ LQ+ A+ +L +G +A +AL + PD Sbjct: 46 ASGRHQDAIASLQQALQLNPGNALALGNLGAAQQELGQTEAAIHSLQQALKLRPDFAIAL 105 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + + A+ + + R +L G A+ + Sbjct: 106 TNLGLCLQSRGDHEAAMACFARSLRLRPGNLR----VLQGLGWSQLQAGHPDAAIDTLQQ 161 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 L ++ + A + + + A+ + PH A + L + Sbjct: 162 VLAQAPHAAEIRLILASAQREARQIQAADQNFRRC-ATEPHASAAVVAASLEHFTVTRQA 220 Query: 312 KRALRLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 +L + + V + +AL+ A A + A Sbjct: 221 NALEQLLDSRGQGVSDPVAQVYAAALALQRQQFSNARAISDQLNSDAITA---------- 270 Query: 369 QANSHNTDKILYWTQSA 385 T +I +W+ A Sbjct: 271 ---LPPTARIRHWSTRA 284 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 2/158 (1%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A+ A Q + + L L Q Q A L+ L++ Sbjct: 46 ASGRHQDAIASLQQALQLNPGNALALGNLGAAQ--QELGQTEAAIHSLQQALKLRPDFAI 103 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ +L GD +A ++L + P V + + + A AI L Q Sbjct: 104 ALTNLGLCLQSRGDHEAAMACFARSLRLRPGNLRVLQGLGWSQLQAGHPDAAIDTLQQVL 163 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 A R IL A+ + A E Sbjct: 164 AQAPHAAEIRLILASAQREARQIQAADQNFRRCATEPH 201 >gi|320588421|gb|EFX00890.1| and tpr domain containing protein [Grosmannia clavigera kw1407] Length = 539 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 61/198 (30%), Gaps = 11/198 (5%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 LA + S +S Q + L LL L+ + A + T A + Sbjct: 10 LAAGIVSALSTQDIPTDTPLSSLLASAHGHLSRGETGEALVYYNAAIARDPTGYLAFFKR 69 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 +G A K L + PD + + +W A + K Sbjct: 70 ATTYLSLGRPAQATDDFNKVLSLKPDFEAAHIQLGKIRQRVADWDGAREHFAKVKATPDM 129 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS-------ICAAKSLISQ 273 +RA+ + + A ++ + + E + +I + A+ ++ Sbjct: 130 QELSRAL---GEAEKAAGLAELAEAAGNWEECISQAGVAIPVANRALSLRQLRARCRFAR 186 Query: 274 NKKRKAEVILEKIWKVNP 291 + + L + +NP Sbjct: 187 GEVEEGAGDLLHVLNLNP 204 >gi|291301009|ref|YP_003512287.1| NB-ARC domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290570229|gb|ADD43194.1| NB-ARC domain protein [Stackebrandtia nassauensis DSM 44728] Length = 827 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 34/120 (28%), Gaps = 14/120 (11%) Query: 91 GLMSIAAHNIPLARKMHSYVS----QQHTFHNEYLVYLLEVQIALAERQYNIA------- 139 G ++A + AR + E ++A A Sbjct: 696 GEAALAHDDADTARDAFTQAREIGSAIGDRAGEAHATFGLAEVARLNGDDREALALVADA 755 Query: 140 HEKLEMMLQIPATRE-FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + P T + + GD ++A+ + +AL ++ A ++ Sbjct: 756 QPVFQDLDDDPCTVLALDLRGDM--AVAQGDRDAARAHWEEALVLATRHALPQTARLRAK 813 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 87/305 (28%), Gaps = 78/305 (25%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML------QIPATREFAVYSLY 161 + + L L +IA Q A + +L A+ L Sbjct: 520 AQAIGDRGAEADALSGL--AEIARLTGQPRRAEDLFRRVLVIRRQIADHDGEAHALRGLA 577 Query: 162 FESCRIGDLNSAQRYATKALDIS------PDAPWVTEAVVQQYVLAKEWS----RAITFL 211 + D +A Y +ALD+ P +++ + ++++ A + L Sbjct: 578 -QVSAGRDFVAAADYYRQALDLHRRNGNGPGEAETLWGLLEIARIFEDYATVEANARSIL 636 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 ++ A+ + + A GD A+ +L +C + Sbjct: 637 EICRRVGNRIGEAHALCGLGTA--FARTGDHEAATTSCRRALSICLDI------------ 682 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIA--------NIYTHLLSENTV--GKLKRALR----- 316 +R A W+ +A + +T + + A Sbjct: 683 --GNRRGAVR----AWRGLGEAALAHDDADTARDAFTQAREIGSAIGDRAGEAHATFGLA 736 Query: 317 -LEEINKESVESLVIVSKI-----------------------ALEMGSIDQAHAKAMLAM 352 + +N + E+L +V+ A+ G D A A A+ Sbjct: 737 EVARLNGDDREALALVADAQPVFQDLDDDPCTVLALDLRGDMAVAQGDRDAARAHWEEAL 796 Query: 353 KIAPR 357 +A R Sbjct: 797 VLATR 801 >gi|186686793|ref|YP_001869986.1| TPR repeat-containing serine/threonin protein kinase [Nostoc punctiforme PCC 73102] gi|186469145|gb|ACC84945.1| serine/threonine protein kinase with TPR repeats [Nostoc punctiforme PCC 73102] Length = 652 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 54/121 (44%), Gaps = 7/121 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + +Y++A ++ E+ ++ FAV +L + GD +A A K L + + Sbjct: 510 QGEYDLAEKQYEIAIRSSDQAIFAVAALARLKNKKGDHTAAATLALKGL-QKTNNRELQA 568 Query: 193 AVVQ----QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ + ++ + + A +L + K + R A L+++ E+ + + +Y D Sbjct: 569 SLYKDLGWARLMENKLTEAERYLEKATK--LDSERTDAYCLLSQIEESLGQLNYARAYID 626 Query: 249 A 249 A Sbjct: 627 A 627 >gi|169615473|ref|XP_001801152.1| hypothetical protein SNOG_10894 [Phaeosphaeria nodorum SN15] gi|111060273|gb|EAT81393.1| hypothetical protein SNOG_10894 [Phaeosphaeria nodorum SN15] Length = 627 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 64/194 (32%), Gaps = 13/194 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL-LEVQIALAERQYNIAHEKLEMMLQI 149 G A + + +Y + F +L L L +Q ++A E L+ + Sbjct: 371 GFAHTFAAEGEHDQAISAYSTAARLFQGTHLPQLFLGMQNLQL-NNLSLAREYLKAAHDL 429 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV-------QQYVLAK 202 T + L A +Y +AL+IS +A+V A+ Sbjct: 430 CETDPLLLNELGVVYYNEEQFLEASQYFRRALEISAQNEAEPDALVPTKINLAHALRRAE 489 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 + A+ + ++ + A+ L + G + E+L + MA Sbjct: 490 LFEDALITFEEVLRHGI----KDPSVFAAKGLVLMELGREWDAVIILHEALAVAPQDPMA 545 Query: 263 SICAAKSLISQNKK 276 + ++L + + Sbjct: 546 TDLLNRALDNSDDM 559 >gi|85090798|ref|XP_958590.1| hypothetical protein NCU09438 [Neurospora crassa OR74A] gi|28919964|gb|EAA29354.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 1444 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 78/236 (33%), Gaps = 38/236 (16%) Query: 134 RQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A+ L+ PA +Y + D A+R KA+++SP Sbjct: 557 KDRSGAYALFLESLKNNLNYAPAYTILGIY----YADYAKDKKRARRCFQKAVELSPSEV 612 Query: 189 WVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI- 243 E + + + +W R A ++ K ++ + I +L A+ Sbjct: 613 ESAERLARSFADDGDWDRVELVAQRVVDSGKVKPPPGSKRKGISWPFAALGVAELNKQEF 672 Query: 244 -ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + +L++ N + + ++ S + A + K+ Sbjct: 673 HKAIVSFQSALRISPNDYHSWVGLGEAYHSSGRYIAATKAILNAQKLE------------ 720 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E++ + E+ + I++ I E+G D++ ++ P + Sbjct: 721 --ESSE---------ANLTGETWFTKFILADIKRELGDFDESIELYQRVIQERPDE 765 >gi|307625903|gb|ADN70207.1| hypothetical protein UM146_03975 [Escherichia coli UM146] Length = 1093 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|291402198|ref|XP_002717429.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1 [Oryctolagus cuniculus] Length = 865 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 23/245 (9%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA-QRYAT--KALDISPDA 187 Y+ A MLQ A+ + + + D+ +A + + + PD Sbjct: 161 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 220 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN--RNRAILLIARSLENADKGDMIAS 245 P V E + + A+ L + + R+R L D + Sbjct: 221 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISE-------DYATA 273 Query: 246 YHDAIESLKLCDNSIMASICAAKS-LISQNKKRKAEVILEKIWK-----VNPHPEIANIY 299 + D +SL+L N ++ + ++A ++ K ++ + + Y Sbjct: 274 HEDFQQSLELNRN-QPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAY 332 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 L + + + +N+ V++L + + GS+ +A +++ P E Sbjct: 333 RELGNFEAAT--ESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 390 Query: 360 IFLLL 364 + + Sbjct: 391 VCQYM 395 >gi|268317521|ref|YP_003291240.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262335055|gb|ACY48852.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM 4252] Length = 521 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 106/364 (29%), Gaps = 65/364 (17%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 A+ ++ ++ Q H ++ +V + + A A + E + Sbjct: 88 ASGESSALQEAVRFIRQHH--PDDPVVLRWQARWAHQHGDLVTARQLYEQLRDRYGADTS 145 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +L+ GD +A + L D P + Y +A L + Sbjct: 146 LNRTLWPLQLATGDTLAALQTLEALLPFDADNPELWRTAGLLYFRRDAREKARWALERAL 205 Query: 216 KNAKEWNRNRAIL------------LIARSLENADKGDMI-ASYHDAI------------ 250 + A E +L L+AR+ ++ + +A Sbjct: 206 RLAPEDTAAARLLARLEPHPTTPAALLARARHLIEQQPEDPQARQEARTLLQDLLRRDST 265 Query: 251 --ESLKL-----------------------CDNSIMASICAAKSLISQNKKRKAEVILEK 285 E+L+L + AA++ ++ R+ + E+ Sbjct: 266 HVEALRLLARLYRDERPDWSAELLTRSLQYDPRDLSVWTTAARTWLAAGMPRRGAEVAEE 325 Query: 286 IWKVNP-HPEI--ANIYTHLLSENTVGKLKRALRLEEINK--------ESVESLVIVSKI 334 + P P + Y HL L L ++ E+ E + + Sbjct: 326 ALFLFPDQPPLLRLAAYAHLSLGRPDAALPHVETLLKLLPEWPEHTPEEAAELHALQGHL 385 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ-ANSHNTDKILYWTQSALHAMPDPL 393 + D A A ++ R L + + L ++AL P+P Sbjct: 386 LARLERPDAAREACRQARRLNTRAAAVRLHCAVVDWLAGGPQETALQEARAALPDPPEP- 444 Query: 394 WISD 397 W+S+ Sbjct: 445 WMSE 448 >gi|260773184|ref|ZP_05882100.1| hypothetical protein VIB_001651 [Vibrio metschnikovii CIP 69.14] gi|260612323|gb|EEX37526.1| hypothetical protein VIB_001651 [Vibrio metschnikovii CIP 69.14] Length = 389 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 47/341 (13%), Positives = 100/341 (29%), Gaps = 63/341 (18%) Query: 98 HNIPLARKMHSYVSQQHTF--HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + + + L + + + A + E ++ P RE Sbjct: 83 GEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVAGFLDRAEKIFEQLIDEPEHRES 142 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + + Y +EW +AI Sbjct: 143 AL----------------------------------QQLTAIYQQTREWHKAIECAQALV 168 Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K ++ +N A ++ G + +L + ASI K ++ Sbjct: 169 KLGRKRMKNSIAHFWCELAMLEQSDGQDNKAMQFFKRALHEDPKCVRASISLGKLCLANQ 228 Query: 275 KKRKAEVILEKI------WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV--E 326 + ++ LE++ + P +A Y HL E+ + L + + Sbjct: 229 QYQQTISHLERVLSQDIDFIGEVLPTLAECYHHLGQEDAL-----VEFLRQCIDNNAGVS 283 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYWTQS 384 + ++++++ + + A + P + F L+ I +A L Q Sbjct: 284 AELMLAQLVAQHDGVASAQELLTRQLVKNPTMKGFYRLIGYHIAEAEEGRAKASLSTLQK 343 Query: 385 ----ALHAMPDPLWISDDGYLSSV---WLPLSPISKTLCYF 418 L A P + S+ W P K Sbjct: 344 LVGEQLKAK--PHYRCRHCGFSTHSLYWH--CPSCKGWGTI 380 >gi|170076790|ref|YP_001733428.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002] gi|169884459|gb|ACA98172.1| soluble lytic transglycosylase [Synechococcus sp. PCC 7002] Length = 717 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 41/176 (23%), Gaps = 13/176 (7%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYF 162 + + Q + A + ++Q P E + L Sbjct: 244 WQYADAAQAYPNAPRTPQNLYRLARSLQVSDQPDQARPAYQTLIQTFPDAPETGL-GLRR 302 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAK 219 + + D A Y +A P A+ A Q Sbjct: 303 LASLVNDTE-ALTYLDQAAQKFP--EEAPSALFAKADLLEKLGSNRSASQTREQALN--- 356 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + A++ +Y AIE K AA+S+ K Sbjct: 357 --THKDQSATTEYRWQQAERYAQEGNYTQAIEWAKAIATLTPDHTLAAESIFWTGK 410 >gi|115375784|ref|ZP_01463036.1| serine/threonine kinase associate protein KapB [Stigmatella aurantiaca DW4/3-1] gi|115367172|gb|EAU66155.1| serine/threonine kinase associate protein KapB [Stigmatella aurantiaca DW4/3-1] Length = 281 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 14/199 (7%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + E G L+ A + KA+++ P + + + Y K + A+ K Sbjct: 27 RGI--ELADRGWLDEAIKEFKKAIELDPSSAHAHDNLATVYAEKKLFREALAEYLTALKL 84 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E L S A+ + + E+++L A + + Q + Sbjct: 85 EPESATAHYNLACFLSTHAAEM-----AVEEYKEAIELDPEYPDAHLNLGLTYADQGRVE 139 Query: 278 KAEVILEKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A L+ + P E+A + + + + + + +++ E+ + + Sbjct: 140 EAMRELQTAIELDAQDAFPRHELAA--LQMDEGDYRSAITQLKEVVRLEQDNFEAHLDLG 197 Query: 333 KIALEMGSIDQAHAKAMLA 351 + G +A A Sbjct: 198 ICYAQKGFYAEAERAYEKA 216 >gi|300820780|ref|ZP_07100930.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7] gi|300526533|gb|EFK47602.1| tetratricopeptide repeat protein [Escherichia coli MS 119-7] Length = 882 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 307 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 366 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 367 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 421 >gi|270158839|ref|ZP_06187496.1| TPR domain protein [Legionella longbeachae D-4968] gi|289166369|ref|YP_003456507.1| Protein with TPR motifs (protein-protein interaction motif) [Legionella longbeachae NSW150] gi|269990864|gb|EEZ97118.1| TPR domain protein [Legionella longbeachae D-4968] gi|288859542|emb|CBJ13507.1| putative Protein with TPR motifs (protein-protein interaction motif) [Legionella longbeachae NSW150] Length = 566 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 6/140 (4%) Query: 125 LEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L Q E Q A E +L +++ L ++GD+++A Y +AL Sbjct: 6 LFAQAYKFQYEGQLPQAISIYEQILTKEPGHLNSLHFLGLIYAQLGDMDNAILYLLQALS 65 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ISP+ + + Y +AI + + + E+ + + L +++N + Sbjct: 66 ISPNDVSLLNNLANAYKKTHLLDKAIEYYQRAIQLDPEYAQAQNNLATVYAMQN----NY 121 Query: 243 IASYHDAIESLKLCDNSIMA 262 + +++ + A Sbjct: 122 SKALFHYTKAVHAEPDFSAA 141 >gi|288933094|ref|YP_003437153.1| cellulose synthase operon C domain protein [Klebsiella variicola At-22] gi|288887823|gb|ADC56141.1| cellulose synthase operon C domain protein [Klebsiella variicola At-22] Length = 1350 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 42/367 (11%), Positives = 98/367 (26%), Gaps = 79/367 (21%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 + + +R +A G ++ + N A++ V Q + + L + IA Sbjct: 261 VQNYFRERRSG---QARGQGYANLNSGNTAAAKQQFEEVLQTNPQDADALAGM--GYIAQ 315 Query: 132 AERQYNIAHEKLEMMLQ---------IPATREFAVYSLYFESC---RIGDLNSAQRY--- 176 Y A + L + Y ++ + G+++ A Sbjct: 316 RSGDYQAASQYLSRAADLGGDASATRRQQAADALFYGQLAQAQQAYKQGNISQALALSAP 375 Query: 177 ------ATKA---------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 A A L + D P + + + + L + + Sbjct: 376 LAQQSGARGASAKLFRADVLRHNKDLPQAEQTLRSLLSDDPQNAAGRENLYYVLREQNKS 435 Query: 222 NRNRAILLIA-----------------------RSLENADKGDMIASYHDAIESLKLCDN 258 +A+L ++ G+ + E + + Sbjct: 436 AEAQAMLQTLPQSLQQKLQPRVVAGMPGDAVRRQAQAQVSSGNPGGAIATLREGVARYPD 495 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 + A+ L +A ++ ++ P +Y L + G ++A L Sbjct: 496 DPWLRLDLARLLQKSGNGSEASSLMSAAYR--PGASNNALYAAALFASENGAWQQAQTLL 553 Query: 319 EINKESVES--------------LVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----E 359 ++ + ++ L G+ A P+ + Sbjct: 554 ARIPGGSQTSDMRDLRQRVNYNLQLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGK 613 Query: 360 IFLLLAQ 366 + LLA+ Sbjct: 614 LARLLAE 620 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 43/266 (16%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK--A 180 L + LA+ A L M P L GDL +A + Sbjct: 577 QLATAENYLAQGNRTAASNTLRAMASTPPKAPADAGKLARLLAESGDLTTAVSLVRNNIS 636 Query: 181 LDISPDAPWVTE--AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL----LIARSL 234 +S +A + AV+ Q L A L+ + A A + +I + Sbjct: 637 SGVSGNAGDYADQIAVLNQAGLTG---EAQNLLSNPQLQASSTPTQLASIRNGYVINEAD 693 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 ++G+ A+Y I +++ + A+ K K + Sbjct: 694 RLREQGNYAAAYDKLIRAMQSDPQNTDLMFAMARLY-QSGKMNKEAGV------------ 740 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +Y +L++ +T + RA + +AL G+ D+A + ++ Sbjct: 741 ---VYDYLMTRDTPNQDARAGAI---------------DVALSAGNNDRA-EQLAGGLRQ 781 Query: 355 APRKEIFLLLAQIEQANSHNTDKILY 380 + LLLA++ +A H+ + Y Sbjct: 782 DNSPDRLLLLARVAEAQGHHQQAMTY 807 >gi|224543089|ref|ZP_03683628.1| hypothetical protein CATMIT_02289 [Catenibacterium mitsuokai DSM 15897] gi|224524029|gb|EEF93134.1| hypothetical protein CATMIT_02289 [Catenibacterium mitsuokai DSM 15897] Length = 401 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 26/162 (16%) Query: 211 LNQKKKNAK--EWNRNRAILLIARSLENADKGDMIASYHDAIESLK---LCDNSIMASIC 265 L++ K K ++ + LI + + KGD+ + A E+++ + A Sbjct: 76 LDKAYKEGKIKDYAEEKMKSLIEEAKQYYRKGDIKLATQCAEEAIEGKVNDPD---AYNV 132 Query: 266 AAKSLISQNKKRKAEVILEKI-----------WKVNPHPEIANIYTHLLSENTVGKLKRA 314 A+ KA ++ W + +++ KR Sbjct: 133 LARCYFDMQNYGKAVKTIDDGINIFNDAINLHW-------LGARMAITGTKDYEDAQKRI 185 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 +L E+ S + L G D A + ++ P Sbjct: 186 NKLLELTPNSSIGHSEQINLHLNKGDEDLAFQEIDTYIEAHP 227 >gi|161485632|ref|YP_720352.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Trichodesmium erythraeum IMS101] Length = 541 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 14/108 (12%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK- 216 L D SA +A+DI +++ AI N+ K Sbjct: 424 RGLA--KYEQQDYQSALAEFDRAIDIDSSHIDAYIYRGDAKDKLEDYEGAIADYNEAIKI 481 Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + K + +L GD + D +++KL N Sbjct: 482 DSSHPKAYYSRENVL--------RKAGDSREAIADYDQAIKLDPNYTP 521 >gi|153006319|ref|YP_001380644.1| hypothetical protein Anae109_3476 [Anaeromyxobacter sp. Fw109-5] gi|152029892|gb|ABS27660.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 634 Score = 41.1 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 67/192 (34%), Gaps = 7/192 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD +A+ KAL + A+ Q A + A + L + ++ + Sbjct: 424 GDPGAAEAAYRKALALDAKYAAAWLALGQLQSAAGRFEEARSSLGRALVARPGYDAAQLS 483 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L +A + G + L ++ A A L + +++ +A L + Sbjct: 484 LGVAAAR----AGRPDEAIAAYQALLARSPRNVSAWYDLALVLEAVSRRDEARAALARAL 539 Query: 288 KVNP--HPEI-ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 ++P P + HL S K L ++ +E +++I+ G+ Sbjct: 540 AIDPGHAPSLRTVAQLHLDSGRLAEARKAFEELLDLVPGDLEGRAALAEISAREGNRAAC 599 Query: 345 HAKAMLAMKIAP 356 A A + AP Sbjct: 600 DAAARRLLAEAP 611 >gi|323703290|ref|ZP_08114941.1| Tetratricopeptide TPR_2 repeat protein [Desulfotomaculum nigrificans DSM 574] gi|323531755|gb|EGB21643.1| Tetratricopeptide TPR_2 repeat protein [Desulfotomaculum nigrificans DSM 574] Length = 192 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 5/132 (3%) Query: 109 YVSQQHTFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 ++ + + LL A + A E +L + + +L Sbjct: 59 KALEEQSKKKPHDTELLNALAANYTEAGKLGQAATTYEKILSLEPKNVSVMENLALIYYA 118 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNR 223 G + A+R KAL I P+ P V Q K + AI + + K + Sbjct: 119 QGKTDVAERQLNKALQIEPNNPDVNFQYAQLQAEKKNYQGAIAAMEKVLQTEKQGPRADE 178 Query: 224 NRAILLIARSLE 235 R ++ ++ Sbjct: 179 ARKLIESWKAAA 190 >gi|331653983|ref|ZP_08354984.1| putative tetratricopeptide repeat protein [Escherichia coli M718] gi|331048832|gb|EGI20908.1| putative tetratricopeptide repeat protein [Escherichia coli M718] Length = 1093 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus] Length = 416 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 55/166 (33%), Gaps = 27/166 (16%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESC---------RIGDLNSAQRYATKA--LD 182 A L+ M ++P L + R G A + + Sbjct: 8 GDRRKALRALDGMKRLP-------RELLHQKSHCMVITACGRGGQWEQAVKLLREMPTAG 60 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 +SP+ AV ++W A+ L + + ++ + +++ KG+ Sbjct: 61 LSPNVI-TYNAVFAACAKGEQWKGALALLKEMTAVGLTPD----VITYSSAVDACAKGEQ 115 Query: 243 ---IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + + ++ L + I S A + + ++A +L++ Sbjct: 116 WKGALALLKEMTAVGLTPDVITYSS-AVDACAKGEQWKEALALLKE 160 >gi|213029668|ref|ZP_03344115.1| putative uroporphyrinogen III C-methyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 523 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 34/114 (29%), Gaps = 2/114 (1%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 ++ + V I N TS + IL + + + R A R Sbjct: 412 IAGHQGYVLIQTDNYNIETSVTGLAIILIVAMVVLFAIEWLLRRLFRTGAHTRGWFASRK 471 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 + K L+ +A + K+ S + + YLL + A Sbjct: 472 RRRARKQTEQALLKLAEGDYQQVEKLMSKNADHA--EQPVVNYLLAAEAAQQRG 523 >gi|170691501|ref|ZP_02882666.1| TPR repeat-containing protein [Burkholderia graminis C4D1M] gi|170143706|gb|EDT11869.1| TPR repeat-containing protein [Burkholderia graminis C4D1M] Length = 613 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 109/321 (33%), Gaps = 30/321 (9%) Query: 93 MSIAAHNIPLARKMHSYVSQ-----QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-M 146 M+ A I LA + S Q + L+ + + + + A LE + Sbjct: 119 MAQRATEIALAAQSPSDALAAAQLWQQYAPSSERAAQLDASLLVLSGKPDDAQPLLEREL 178 Query: 147 LQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 ++P R A+ +L R + + L + P AV +Q ++A + Sbjct: 179 AKVPADNRGNAILALQLLLSRGPNRIGGLHVLQEMLKNDMNRPEAQLAVARQQLVANDAP 238 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A L Q ++ L + ++ + IAS ++ + A + Sbjct: 239 GARKSLEQALALKPDY---LPAALTLSQMGPEERKEGIASLEKYVQQNPKSHD---ARLA 292 Query: 266 AAKSLISQNKKRKAEV---ILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEE 319 A+ ++ ++ A+ I+ K + P +A + + L + + E Sbjct: 293 LAQMYLASDRLDDAQKQFEIMHKANANDLTPLMALALIRIQQKSFNDAQAYLTQYAQQAE 352 Query: 320 INKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN----SH 373 + ++ + +++++LE + A KI+P + + L AQI +A Sbjct: 353 KTPGADPGQAYIYLAQLSLEQKNEAAAADWLD---KISPSSQQY-LPAQITRAQLLAKQG 408 Query: 374 NTDKILYWTQSALHA-MPDPL 393 D A D Sbjct: 409 KPDDARRQLARLRPADPRDQA 429 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 8/146 (5%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + A +L D +A+ + +S A+ A L+ K Sbjct: 111 ARDTHDPRMAQRATEIALAAQSPSDALAAAQLWQQ---YAPSSERAAQLDASLLVLSGKP 167 Query: 277 RKAEVILEKIWKVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKES---VESLVIV 331 A+ +LE+ P A + LL ++ L+E+ K E+ + V Sbjct: 168 DDAQPLLERELAKVPADNRGNAILALQLLLSRGPNRIGGLHVLQEMLKNDMNRPEAQLAV 227 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ L A A+ + P Sbjct: 228 ARQQLVANDAPGARKSLEQALALKPD 253 Score = 37.2 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 17/203 (8%) Query: 126 EVQIALAERQYNIAHEKLEMML-QIPATREFAVY---SLYFESCRIGDLNSAQRYATKAL 181 Q+ + + + A +L + P + V ++ F++ R G+ + + AT A Sbjct: 400 RAQLLAKQGKPDDARRQLARLRPADPRDQAVVVRTDAAILFDAKRYGEAETRLQEATAAF 459 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 PD + A++ + + + + + + A AD+ Sbjct: 460 PDDPDL------TYDYAMAAEK-NGHFDTMEAQLRKLIQTQPDNPQAYNALGYSLADRNQ 512 Query: 242 MIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN--- 297 +A +E + L N A +L K + + P+ EI Sbjct: 513 RLAEADKLVEKASSLAPNDAFIMDSVGWVKYRMGDTTDAIKVLRKAYDIQPNAEIGAHLG 572 Query: 298 --IYTHLLSENTVGKLKRALRLE 318 ++ + + A +LE Sbjct: 573 EVLWKSGNQDQARAAFREARKLE 595 >gi|119505824|ref|ZP_01627890.1| TPR domain protein [marine gamma proteobacterium HTCC2080] gi|119458322|gb|EAW39431.1| TPR domain protein [marine gamma proteobacterium HTCC2080] Length = 605 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 99/277 (35%), Gaps = 18/277 (6%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL--EMM-LQIPATREFAVYSLYF 162 ++ + L LL+ + L +R+ + A E L + M LQ P +L Sbjct: 64 ANAGSPAETPIPAASLYPLLQAEFLLRQRRLDEALEILTRQAMQLQDPE---LTRRALRL 120 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 R D N A + K D + + + A + RA+ F K+ N Sbjct: 121 AEFRQNDRN-ALVLSMKLTDQDSNDGAAAVTAMGLLIRAGQPERALVFARTAKERGARIN 179 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEV 281 A+++ L D +AIESL + +I A +QN A Sbjct: 180 -APALMVSWDKLG----ADRRRLTAEAIESLAVDWPEDQDIAIALAYLYRAQNNPEGALD 234 Query: 282 ILEKIWKVNPHPEIANI-YTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 IL+ + +P E A + +T + + KR + ++ + +++ Sbjct: 235 ILDPVLNESPDEERALLLWTQIKLDQGGKNPFKRMRAALKRAPDNEALRLQFARLLAGTE 294 Query: 340 SIDQAHAKAMLAMKIAPRKEIF---LLLAQIEQANSH 373 D+A + + ++PR + L L +IE Sbjct: 295 QYDEAREQFAALLVLSPRNGDYLFSLALIEIEAKQLA 331 >gi|94268542|ref|ZP_01291208.1| TPR repeat [delta proteobacterium MLMS-1] gi|93451563|gb|EAT02372.1| TPR repeat [delta proteobacterium MLMS-1] Length = 538 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 5/101 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L E + A + A + + + P +RE A+ L + D +A + L Sbjct: 362 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAAM-GLATVAQSRNDPLTALHLYQQIL 420 Query: 182 DISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAK 219 + P + +V A LN+ + A Sbjct: 421 ERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNRHPQAAP 461 >gi|91201109|emb|CAJ74168.1| hypothetical protein kuste3406 [Candidatus Kuenenia stuttgartiensis] Length = 610 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 74/213 (34%), Gaps = 25/213 (11%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKK 216 + D A +A+ + PDAP AV+ ++ RAI + + Sbjct: 38 ILIHKQNYQD---ALHEYERAISLKPDAPEAWYNKAAVLDYM---GDFERAIEAADMAVQ 91 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + ++ A + R+ ++ G + ++L++ +++M Sbjct: 92 SKPDY--WEAWYMKGRASDH--TGKYYEAIKAFDKALEIKPDALMVLYNKGNVHDHIGDI 147 Query: 277 RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL--KRALRLE------EINKESVESL 328 + + I K+ P+ + + + ++ KR + LE IN E+ Sbjct: 148 EASVKTYDSILKLK--PDEYEAWNN--KGLALARIPEKRGIALEAYDQAIRINPVYYEAW 203 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + + + +A A+KI P++ Sbjct: 204 INKGNCFVRLRRYGEAIDAYDTAIKIRPKEHAA 236 >gi|329119615|ref|ZP_08248296.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC BAA-1200] gi|327464212|gb|EGF10516.1| tetratricopeptide repeat protein [Neisseria bacilliformis ATCC BAA-1200] Length = 624 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 89/267 (33%), Gaps = 10/267 (3%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L ++AL + A ML+ E A ++ + +G A++ L I Sbjct: 65 LFGAELALQKGDPGTALGTYIAMLERTRDPEVAERAI-DMAVGLGAYQYAEQVYQSWLKI 123 Query: 184 SPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR--SLENADKG 240 P P + + ++ ++ A + A E R+R LL+A+ + Sbjct: 124 EPAPGPALQRITWMRDMVRGNYANARDGFTAALEGADEAQRSRIFLLVAQIAAQNPEVAK 183 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 M + H + + + ++ A L + N K A V + + Y Sbjct: 184 IMEETVHRQAAAHQDKPD----AVIADAILSALNDKPSAAVAALQRLAALDSEILPPTYL 239 Query: 301 HLL--SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L + + R + ++ S + + + G D+A + P Sbjct: 240 TLRLIGQRKPDTINRFFAETDTDQLSPVWQELQIEALVYAGKKDEAGRLLQNLIDKRPSA 299 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSA 385 ++++ A + ++ + + A Sbjct: 300 DLYIQAALLAANRKAPLEETVGYLTKA 326 >gi|324507792|gb|ADY43297.1| Signal recognition particle 72 kDa protein [Ascaris suum] Length = 644 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 9/122 (7%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD + A + A K L P + + + ++ A+ + K Sbjct: 20 ADTSGDYDKALKTANKILRNFPRETLAFKCKLVAQIQLGQFEEALALI------KKTPFH 73 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L ++ D A+ ++ + + A+ L K +A I Sbjct: 74 QMGDCLFEKAYVQYRLNDDTAAMETLAKAN---PDDVRCMELKAQLLYRAEKFDEAAAIF 130 Query: 284 EK 285 +K Sbjct: 131 KK 132 >gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644] Length = 923 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 78/268 (29%), Gaps = 45/268 (16%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + Y + L +L A+ + A +++ A Sbjct: 633 GEFEKAIR--DYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAY 690 Query: 158 --YSL--------------YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ-YVL 200 + ++ + D YA +A + V +A+ L Sbjct: 691 YNRGFAWTCLGQFARSIPDFTQAIAL-DPEDGSAYANRAFALH-SLGAVAQAIEDYTQAL 748 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA---------------DKGDMIAS 245 + A T+ N+ + + AI A +L GD+ + Sbjct: 749 QRLGRDASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAVNLAVCRQAVGDLERA 808 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 D E+++L + + + + + +A K+N P++ + L Sbjct: 809 LADLNEAIRLDPDEAEIYLIRGRLHLQRGDPTQAAADFAAALKLN--PDLPSA-LRLRGL 865 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSK 333 KR L ++ S ++++ Sbjct: 866 ALFKLGKRLTALLDL------SRSLLAR 887 >gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata] Length = 484 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 15/175 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFES-CRIGDLNSAQRYATKALD----ISPDA 187 + A + L+ M+++ E Y L E C+ G + A + K ++ + P + Sbjct: 304 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQS 363 Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P +++ + S+A T + Q K L ++ +G Sbjct: 364 TLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 419 Query: 243 IASYHDAIESLKLCDNSIMASICAA-KSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +++ L+ +S ++ + +S + +N+ A+ L+ + + + P+ A Sbjct: 420 DSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 474 >gi|242024304|ref|XP_002432568.1| General transcription factor 3C polypeptide, putative [Pediculus humanus corporis] gi|212518028|gb|EEB19830.1| General transcription factor 3C polypeptide, putative [Pediculus humanus corporis] Length = 827 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 7/129 (5%) Query: 156 AVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 A+ L ++ GD SA + + + P AP + + + Y +++ Sbjct: 103 ALEGLMGQANMCFVKGDHESALQMCLEIIRQVPSAPEPFQTLAEIYEEKGLKEKSLQVAM 162 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + + + I L RSL+ + D I Y AI K +I I + L Sbjct: 163 IA-AHLNPRDCEQWINLGERSLQLNNLSDAITCYSRAI---KYDPGNINPHIIRCQLLEQ 218 Query: 273 QNKKRKAEV 281 + ++ A Sbjct: 219 KGDRKSAIK 227 >gi|253772555|ref|YP_003035386.1| hypothetical protein ECBD_1135 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162523|ref|YP_003045631.1| hypothetical protein ECB_02441 [Escherichia coli B str. REL606] gi|300930195|ref|ZP_07145612.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|242378149|emb|CAQ32922.1| conserved protein [Escherichia coli BL21(DE3)] gi|253323599|gb|ACT28201.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974424|gb|ACT40095.1| hypothetical protein ECB_02441 [Escherichia coli B str. REL606] gi|253978591|gb|ACT44261.1| hypothetical protein ECD_02441 [Escherichia coli BL21(DE3)] gi|300461915|gb|EFK25408.1| tetratricopeptide repeat protein [Escherichia coli MS 187-1] gi|309702881|emb|CBJ02212.1| putative TPR-domain protein [Escherichia coli ETEC H10407] gi|323936289|gb|EGB32580.1| tetratricopeptide [Escherichia coli E1520] gi|323961365|gb|EGB56977.1| tetratricopeptide [Escherichia coli H489] gi|323971037|gb|EGB66285.1| tetratricopeptide [Escherichia coli TA007] Length = 1093 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|28868322|ref|NP_790941.1| TPR domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851559|gb|AAO54636.1| TPR domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 575 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 89/275 (32%), Gaps = 39/275 (14%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 +F + LV LL ++A +++IA + + + Y + +G S Sbjct: 45 YGSFSQDTLVSLLSAELAGQRNRFDIALDNYVTQAVKTQDPGVSERA-YQIAEYMGADQS 103 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN---------- 222 A A +P A Q A + ++ ++ + + + + Sbjct: 104 ALETALIWARNAPSDLEAKRAAAIQLARAGRYDDSLVYMERVLQGQGDTHFDFLALSAAE 163 Query: 223 --------------------RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 L+ ++L GD S +E + I Sbjct: 164 TDPDTRNGLLKSFDRLLGKYPKNGQLIFGKALLLQQNGDSEQSLKL-LEDNPPKEGEIAP 222 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV--GKLKRALRL 317 + A+ L S N+ ++A +LEK K +P+ + Y +L E + L Sbjct: 223 ILLHARLLQSMNRGKEAVPLLEKSIKK--YPDDKRLRLTYARMLVEQNRMEDAKVQFAAL 280 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + E ++ + LE + ++A + Sbjct: 281 VQQYPDDDELRFSLALVCLEAKAWEEAAGYLEELI 315 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 12/293 (4%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 K+ Q ++ L + L + L + + A LE ++ A + A +L Sbjct: 273 AKVQFAALVQQYPDDDELRFSL-ALVCLEAKAWEEAAGYLEELIARGAHVDSAHLNLGRI 331 Query: 164 SCRIGDLNSAQ-RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 D SA YA + PD V + A L++ + ++ Sbjct: 332 HEEREDPQSALNEYAQ--VGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEPDYA 389 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 L + + + + ++LK + A +N + E Sbjct: 390 IQ---LYLIEAETLTSNDQLDRGWQVLNQALKQYPDDANLLYTRAMLAEKRNDLAQMEKD 446 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN----KESVESLVIVSKIALEM 338 L I K P +A + + A L E + L + + + Sbjct: 447 LRTIIKREPENAMALNALGYTLSDRTTRYTEARELIEKAHQISPDDPAVLDSLGWVNYRL 506 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 G++D A A++ P E+ L ++ A + + AL PD Sbjct: 507 GNLDAAERYLRQALERFPDHEVAAHLGEVLWAK-GDQREARQVWAKALEQQPD 558 >gi|323967997|gb|EGB63409.1| tetratricopeptide [Escherichia coli M863] gi|327252257|gb|EGE63929.1| tetratricopeptide repeat family protein [Escherichia coli STEC_7v] Length = 1093 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|306814387|ref|ZP_07448549.1| hypothetical protein ECNC101_20137 [Escherichia coli NC101] gi|305851781|gb|EFM52233.1| hypothetical protein ECNC101_20137 [Escherichia coli NC101] Length = 1093 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|302877727|ref|YP_003846291.1| cellulose synthase operon C domain-containing protein [Gallionella capsiferriformans ES-2] gi|302580516|gb|ADL54527.1| cellulose synthase operon C domain protein [Gallionella capsiferriformans ES-2] Length = 1236 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 96/296 (32%), Gaps = 54/296 (18%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH----EKLEMMLQIPATREF 155 P K+ + + ++ ++ + ALA+ + A + ++ P Sbjct: 172 SPKVDKIDADEAAVRLANDPDIIARTDALDALADGNIDQAETSLLDIIKRRPNDPE--VI 229 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS---------- 205 L + G+ +++Y +A+ + + A W Sbjct: 230 GGLGLVHQK--RGNFIESEKYFIQAVAAAQG----------EESEAGRWESLIGTARFSQ 277 Query: 206 ---RAITFLNQKKKNAKEWNRNRAI--------LLIARSLENADKGDMIASYHDAIESLK 254 A LN+ K E +AI L R ++ + + E+LK Sbjct: 278 YMTNAKALLNENKLPEAEAAIEQAIALKPGDPDTLAVRGNIKTEENNFPEAERLYREALK 337 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKI-------WKVNPH------PEIANIYTH 301 + + A+ A L+ + +A +E++ W+ +P+ E N+Y Sbjct: 338 IEGYNSFATRGLANLLVRMGRSEEALSFIEQVLNDYPNEWRKSPYSQASLLREAGNLYIA 397 Query: 302 LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + +K + ++ ++ ++K + + I A + ++P Sbjct: 398 AHQPSYA--VKAFEQAVSVDPKNPWVRFSLAKHYISLDLIPLARGVIQEGVNLSPD 451 >gi|163787308|ref|ZP_02181755.1| TPR repeat [Flavobacteriales bacterium ALC-1] gi|159877196|gb|EDP71253.1| TPR repeat [Flavobacteriales bacterium ALC-1] Length = 686 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A + ++Q A+ + A Y KALD+SP P Sbjct: 101 NNNFVDAKAYYKDLVQEDPKSFAALLGFANTLSNLKAYEDALTYVNKALDVSPGNPNAMT 160 Query: 193 AVVQQYV-------LAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIA 244 + Y+ A+ + +A L + + + + + + E D+ + Sbjct: 161 SKKYIYLGYAYQNQQAQHYDKAEMLLTKNLELFGDDKDTLLNLANLYLIWEKYDEAQTMY 220 Query: 245 SYHDAIESLK--LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + K + A K++KA I + + Sbjct: 221 NRLAEQPQHKIIASNGL----ALVAHL---NGKEKKALAISTEAYNS 260 >gi|144900378|emb|CAM77242.1| TPR repeat [Magnetospirillum gryphiswaldense MSR-1] Length = 497 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 45/153 (29%), Gaps = 7/153 (4%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 +S GD SA+ + L I P + + + A L Q Sbjct: 16 QSLERGDAASAEHQFRQGLMIRRGDPQALQGLGLALIRQGRQGDARQPLEQAAAALP--- 72 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A + GD A+ + ++ A + L+ + +AEV+ Sbjct: 73 -KDAGCAANLGALLIELGDHPAAEPHLRRATRVQPGMAAAWNNLGRVLMHLGRLDEAEVM 131 Query: 283 LEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 L K + P + E +L R Sbjct: 132 LRKALTLRPA---YSQCRENWRETQDIRLHRLE 161 >gi|121703103|ref|XP_001269816.1| UDP-N-acetylglucosaminyltransferase [Aspergillus clavatus NRRL 1] gi|119397959|gb|EAW08390.1| UDP-N-acetylglucosaminyltransferase [Aspergillus clavatus NRRL 1] Length = 1669 Score = 41.1 bits (95), Expect = 0.47, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 37/112 (33%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y+ A ++ AT A+ +L + A ++ +A+ + P E Sbjct: 575 GDYHKAMRWYSRIIARDATHVEAISNLAATLLALERREDALQHWLRAVKLRPSFFEAVEH 634 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++ Y + A+ ++ + + + + E D AS Sbjct: 635 LIGLYCTSHRGKEAVRIIDYVQNSLRSPQNGDCFTADEHASETESDADSRAS 686 >gi|326916559|ref|XP_003204574.1| PREDICTED: WD repeat-containing protein 35-like [Meleagris gallopavo] Length = 1267 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 41/138 (29%), Gaps = 12/138 (8%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQR 175 + L LL + AL + A + + L ES + ++ + Sbjct: 783 PHPRLWRLL-AEAALQKLDLQTAEQAFVRCKDYQGIKFVKRLGNLQSESMQQAEVAAYFS 841 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A + + + + +W R + L ++ + +A I Sbjct: 842 RFEEAERM-YLDMDRRDLAIGLRIKLGDWFRVLQLLKTGSGDSDDALLEQAHNAI----- 895 Query: 236 NADKGDMIASYHDAIESL 253 GD A + ++ Sbjct: 896 ----GDYFADRQKWLNAV 909 >gi|301024832|ref|ZP_07188469.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] gi|300396363|gb|EFJ79901.1| tetratricopeptide repeat protein [Escherichia coli MS 69-1] Length = 1093 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|125597406|gb|EAZ37186.1| hypothetical protein OsJ_21527 [Oryza sativa Japonica Group] Length = 674 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 87/281 (30%), Gaps = 29/281 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--IAHEKLE-MMLQIPATRE 154 + AR+++ +E+ L ER A + + ++P + Sbjct: 240 GEVERARRVYERA-ADLLADDEHAEVLFVAFAEFEERCREVERARAVYKYALDRVPKGQA 298 Query: 155 FAVYSLYFESCRI-GDLN--------SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 +Y + + GD + + +P ++ Sbjct: 299 EELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKD 358 Query: 206 RAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD-- 257 R + N R L I +L E D DM + E LKL Sbjct: 359 RIREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELDAKDMERTREVYSECLKLIPHK 418 Query: 258 --NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + AA+ I Q + A IL + P +I Y + E +G +R Sbjct: 419 KLTFSKMWLMAAQFEIRQKNLKAARRILGNAIGMAPKGKIFKKYIEI--ELYLGNFERCR 476 Query: 316 RLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L E + + + + +++ +G D+A + LA+ Sbjct: 477 TLYEKYIEWSPANCYAWMKYAELEKSLGETDRARSIYELAI 517 >gi|124024305|ref|YP_001018612.1| glycosyl transferase [Prochlorococcus marinus str. MIT 9303] gi|123964591|gb|ABM79347.1| Glycosyl transferase, family 2:TPR repeat [Prochlorococcus marinus str. MIT 9303] Length = 427 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 72/199 (36%), Gaps = 19/199 (9%) Query: 174 QRYATKA-LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-----NAKEWNRNRAI 227 R A +A L P P+ + V + R I L Q K NA R + Sbjct: 210 LRTAMEAWLAEHPGDPYTCAKLGALEVDEGQKERGIQLLRQGLKQNENTNANPIERYELL 269 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDN---SIMASICAAKSLISQNKKRKAEVILE 284 L + +L + D + E++ L + S+ A + A L+ Q +A + Sbjct: 270 LHLGIAL---AQDDPQGAVTAYREAVALPMDIRVSLGARLNLAALLMQQELLDEAIALTT 326 Query: 285 KIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 PE+A + +L N V L + +++N E E+ + L G Sbjct: 327 TA--TQQAPEVALAWYNLGLMQRRRGNLVEALYAYEQAKQLNPEHAETHQNHAVAMLVAG 384 Query: 340 SIDQAHAKAMLAMKIAPRK 358 I+ A A+ + R+ Sbjct: 385 DINGARNSFSKAITLLQRQ 403 >gi|67526011|ref|XP_661067.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4] gi|40743817|gb|EAA63003.1| hypothetical protein AN3463.2 [Aspergillus nidulans FGSC A4] gi|259485544|tpe|CBF82655.1| TPA: DnaJ and TPR domain protein (AFU_orthologue; AFUA_3G05400) [Aspergillus nidulans FGSC A4] Length = 519 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 7/180 (3%) Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIGDLNSA 173 N + L+ + L+ A L+ + T V +G A Sbjct: 29 PNTPMSSLIASAKAHLSSGSPRDALLYLDAAISRDPTNYLTVFQRG--AAYLSLGRRAQA 86 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNR-NRAILLIA 231 Q + L + P+ + V +WS A+ L + KKN E+ A Sbjct: 87 QDDFDRVLQLKPNFEGALLQRARLRVNTADWSGALNDLEKAGKKNTPEYEEFQNARDATI 146 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 R+L+ KG A +A ++ S+ A + + + L +++P Sbjct: 147 RALDAEKKGAWEACVSEATTAIAKASASLTLRRSRAHCRFEKGELEEGISDLTHTLQISP 206 >gi|302038642|ref|YP_003798964.1| putative type IV pilus biogenesis/stability protein PilW [Candidatus Nitrospira defluvii] gi|300606706|emb|CBK43039.1| putative Type IV pilus biogenesis/stability protein PilW [Candidatus Nitrospira defluvii] Length = 233 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 7/161 (4%) Query: 130 ALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A A+ + ++ P +E Y L G A+ +A+ I D Sbjct: 54 ARLSSDQQQAYVSFQKAVKLNPDNKEA-HYGLGHIYSSQGRFKLAEESFREAIRIDGDYA 112 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + Q W AI Q N + A + ++L + +GD+ + Sbjct: 113 EANTYLGQVLANQDRWKEAIAAYRQALSNPLYPTPDLARFHLGKALMH--EGDLQGAMEV 170 Query: 249 AIESLKLCDNSIMASIC---AAKSLISQNKKRKAEVILEKI 286 ++ + ++ ++ A+ +A L K+ Sbjct: 171 LEDATTVTPPNVPPAMLQLELARVYHKLGFDVRAREALAKV 211 >gi|297706453|ref|XP_002830052.1| PREDICTED: crooked neck-like protein 1-like isoform 1 [Pongo abelii] Length = 848 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 660 RAIYELAI 667 >gi|221045550|dbj|BAH14452.1| unnamed protein product [Homo sapiens] Length = 438 Score = 41.1 bits (95), Expect = 0.48, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C + A ++ Sbjct: 123 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 178 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 179 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 238 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R N+ + + D ++KL D I A + A+ + + +A EK+ Sbjct: 239 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 298 Query: 287 WKVN 290 ++ Sbjct: 299 YQTE 302 >gi|323449134|gb|EGB05025.1| hypothetical protein AURANDRAFT_54921 [Aureococcus anophagefferens] Length = 1310 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 47/255 (18%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYS-LYFESCRIGDLNSAQRYATKAL-----DISP 185 Y A E + T A+Y +Y + ++ Q+ A D SP Sbjct: 303 MLGDYAGAMEMYREAGRSDETNLAALYGTIYCQVMTGELEDAEQQLEFIAAISDSIDQSP 362 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 P+ + L +++ + L+ ++ + +G S Sbjct: 363 QLPY------------------LKALIAWRRSGDASEH---VQLLEQAEKLHFRGLTDRS 401 Query: 246 YHDAIESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + L + + I AK + + + P A Sbjct: 402 VSSIFNNFYGLDPDFL---IQLAKEYLQHLRFQD--------------PSSARAQLGSSP 444 Query: 305 ENTVGK-LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA-PRKEIFL 362 V + ++ R+ +E+ ++V+ L +G ++ A LA+ + L Sbjct: 445 AGAVNRGIEILERVSAQAPGLIEAHLLVAHARLAVGQLEAATRTLNLALSLDSQSAAAHL 504 Query: 363 LLAQIEQANSHNTDK 377 L+A++ A ++ Sbjct: 505 LMARLALAQDNHRGA 519 >gi|312110462|ref|YP_003988778.1| hypothetical protein GY4MC1_1366 [Geobacillus sp. Y4.1MC1] gi|311215563|gb|ADP74167.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp. Y4.1MC1] Length = 420 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 71/238 (29%), Gaps = 46/238 (19%) Query: 124 LLEVQIALAER----QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L+ + + + E M P + L +G + + + K Sbjct: 106 LIAADLYQMQGLEEVSERKLQQAYEKMPDEPIIQFA----LAELYFSMGQYSKSIPFYEK 161 Query: 180 ALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 L E + + L E+ +A+ + ++ + + L + Sbjct: 162 VLKKEKTIAGTHIPERLAEALSLCGEFEQALPYYDEALQEKLDSQ-----TLFGYGVTAF 216 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + E L + + AK+ + + LEK + EIA Sbjct: 217 QAEYYQTAIEKLSELKALDPEFVPLYLYLAKAYEHEGQ-------LEKSY------EIAK 263 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 H+ + E L+ K+AL++G D+A + A++I Sbjct: 264 EGIHVDE------------------WNKELLLYAGKVALKLGKPDEAESWLKKAIEID 303 >gi|297706455|ref|XP_002830053.1| PREDICTED: crooked neck-like protein 1-like isoform 2 [Pongo abelii] Length = 836 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 648 RAIYELAI 655 >gi|117624771|ref|YP_853684.1| hypothetical protein APECO1_3982 [Escherichia coli APEC O1] gi|218559469|ref|YP_002392382.1| hypothetical protein ECS88_2719 [Escherichia coli S88] gi|115513895|gb|ABJ01970.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|218366238|emb|CAR03985.1| conserved hypothetical protein [Escherichia coli S88] gi|315288023|gb|EFU47425.1| tetratricopeptide repeat protein [Escherichia coli MS 110-3] gi|323949203|gb|EGB45094.1| tetratricopeptide [Escherichia coli H252] gi|323955784|gb|EGB51542.1| tetratricopeptide [Escherichia coli H263] Length = 1093 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|221219056|ref|NP_001138238.1| dnaJ homolog subfamily C member 7 isoform 2 [Homo sapiens] gi|332260849|ref|XP_003279493.1| PREDICTED: dnaJ homolog subfamily C member 7 [Nomascus leucogenys] gi|31416724|gb|AAH03601.1| DNAJC7 protein [Homo sapiens] gi|119581192|gb|EAW60788.1| DnaJ (Hsp40) homolog, subfamily C, member 7, isoform CRA_a [Homo sapiens] gi|194385152|dbj|BAG60982.1| unnamed protein product [Homo sapiens] Length = 438 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C + A ++ Sbjct: 123 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 178 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 179 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 238 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R N+ + + D ++KL D I A + A+ + + +A EK+ Sbjct: 239 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 298 Query: 287 WKVN 290 ++ Sbjct: 299 YQTE 302 >gi|50949465|emb|CAH10656.1| hypothetical protein [Homo sapiens] Length = 728 Score = 41.1 bits (95), Expect = 0.49, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 361 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 420 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 421 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 480 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 481 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 539 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 540 RAIYELAI 547 >gi|324008454|gb|EGB77673.1| tetratricopeptide repeat protein [Escherichia coli MS 57-2] Length = 1093 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|323978421|gb|EGB73506.1| tetratricopeptide [Escherichia coli TW10509] Length = 1017 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|297521558|ref|ZP_06939944.1| cellulose synthase subunit BcsC [Escherichia coli OP50] Length = 411 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 5/155 (3%) Query: 104 RKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 R+ + + + L A R Y A + +L A+ L Sbjct: 125 RESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGL 184 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--KKKNA 218 GD +A+ K + V + + A N+ + + Sbjct: 185 TEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKS 244 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + A++L + A GD + +++ Sbjct: 245 QPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAM 279 >gi|294666027|ref|ZP_06731289.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604219|gb|EFF47608.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 562 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L A+ Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 372 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 429 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 488 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 545 RLDPDNRAL 553 >gi|229111868|ref|ZP_04241414.1| TPR domain protein [Bacillus cereus Rock1-15] gi|229146966|ref|ZP_04275330.1| TPR domain protein [Bacillus cereus BDRD-ST24] gi|228636565|gb|EEK93031.1| TPR domain protein [Bacillus cereus BDRD-ST24] gi|228671624|gb|EEL26922.1| TPR domain protein [Bacillus cereus Rock1-15] Length = 222 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 14 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 74 AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208 >gi|254475750|ref|ZP_05089136.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, putative [Ruegeria sp. R11] gi|214029993|gb|EEB70828.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase, putative [Ruegeria sp. R11] Length = 730 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 12/172 (6%) Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ A E A A + + ++L L + A Sbjct: 105 NALDEAATCLNKACELQPTSATTFAAMGDVYKRQNRGQDALALYKKALSLDPACLPALNN 164 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKL----KRALRLEEI 320 +L+ Q+K +A+ K + P+ A + Y + +G + K + Sbjct: 165 MGNTLLEQDKIIEADECFAKA--IEQAPDNAQLLYNRANIQRQLGNVDVACKLYEQAARY 222 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-----RKEIFLLLAQI 367 +E+ ++++A + G +A + P R L+A++ Sbjct: 223 APNFLEARYNLAQMAGQAGRQAEAIHHLEQILVARPADDRARARKLRLMAEL 274 >gi|220933709|ref|YP_002512608.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995019|gb|ACL71621.1| Tetratricopeptide TPR_2 repeat protein [Thioalkalivibrio sp. HL-EbGR7] Length = 574 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 21/224 (9%), Positives = 61/224 (27%), Gaps = 62/224 (27%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + +A R + + ++++P + + + V A A+ L+ +N+ + Sbjct: 94 ALFADQREAALRASMRWVELAPASVEGRQVLGALLVNAGRVPEAVEQLDWVIQNSPQGQA 153 Query: 224 N-------------------------------RAILLIARSLENADKGDMIASYHDAIES 252 A + +A++ + A + Sbjct: 154 AGHTTVSNLLSRSQNQAAALAAMGQLAERYPGDASMQLAQARLALQMRQPEQALEAADRA 213 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 L L A + A++ + I+ + Sbjct: 214 LTLDPGLSDAKVLRARAYTQMGDLGRGVQIMREA-------------------------- 247 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ + + ++ ++ G D+A A+ + P Sbjct: 248 -----VASDPQNTDLRLAYGRLLIQAGDYDEARAEFEQLIARRP 286 Score = 37.2 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 79/241 (32%), Gaps = 19/241 (7%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +IA ER+ + A + R+ V L R G +++A + + + Sbjct: 330 GRIAETERRSDDALRHYRGVGDGDHFRDARVR-LALLMGRAGQVDAALDMLREMRRDADE 388 Query: 187 APWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 W + Q A+E+ A+ L+Q + LL AR+L + Sbjct: 389 PDWRVRLYLTESQVLRDAREYQAAMEVLDQGLLEQPDSGE----LLYARALVAEKLDRLD 444 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLI---SQNKKRKAEVILEKIWKVNPHPEIANIYT 300 D L ++ A+ A ++ +A + + HPE A I Sbjct: 445 ILETDLRAILARDPDN--AAALNALGYTLADRTDRLDEAYDYIRRA--HAQHPEDAAILD 500 Query: 301 HL-LSENTVGKLKRALRLEEINKE---SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L +G+L A + E ++ + + G D+A A+ P Sbjct: 501 SLGWVLYRMGRLDEAETYLRQAYDTMYDPEIASNLAMLLWDRGQRDEARRVLEDALAQDP 560 Query: 357 R 357 Sbjct: 561 D 561 >gi|194437693|ref|ZP_03069789.1| tetratricopeptide repeat protein [Escherichia coli 101-1] gi|194423499|gb|EDX39490.1| tetratricopeptide repeat protein [Escherichia coli 101-1] Length = 1068 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 607 >gi|170029427|ref|XP_001842594.1| o-linked N-acetyl glucosamine transferase [Culex quinquefasciatus] gi|167862425|gb|EDS25808.1| o-linked N-acetyl glucosamine transferase [Culex quinquefasciatus] Length = 840 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A+ + AH ML ++R + A+++ +AL ++P Sbjct: 683 ALEAQPDHIAAHLSYGSMLARNSSR----------------TSEAEQWFRRALRLAPADA 726 Query: 189 WVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V + + + AI + +N + +++ + A +L D+ + + Sbjct: 727 SVHHHYAEFLTTVRRTAEAIQYRVNAAELAPSDYS---LVTAAASALRLLDRK--VEAER 781 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++ L A L + ++A + ++ P Sbjct: 782 WYRQAVNLRPEEARAHTNLGAILHLLGRPQEAAHSYREALRIQP 825 >gi|113952955|ref|YP_731753.1| TPR repeat-containing glycosyl transferase [Synechococcus sp. CC9311] gi|113880306|gb|ABI45264.1| Glycosyl transferase, family 2:TPR repeat [Synechococcus sp. CC9311] Length = 402 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 61/186 (32%), Gaps = 14/186 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE-----WNRNRAILLIAR 232 + L+ P P+ + V + I L + N E R +L + Sbjct: 190 QEWLEQEPGHPYACAKLGALEVADGDRIHGIALLREGLANLGEGDENAAERYELLLHLGI 249 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ-NKKRKAEVILEKIWKVNP 291 +L D I Y A+ + L + + +L+ Q NK +A + + Sbjct: 250 ALSTEDTNQAIEFYKQAL-AQSLDVRLGLGARLNLAALLLQTNKIDEAIQLTTTACQRA- 307 Query: 292 HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 PE+A + +L L+ R + E ++ L G ID A A Sbjct: 308 -PEVALAWYNLGLMQRRKGEIKDALQSYERAISLEPSHAECHQNLAVARLVGGDIDGARA 366 Query: 347 KAMLAM 352 A+ Sbjct: 367 SFREAI 372 >gi|157128485|ref|XP_001661450.1| Anaphase Promoting Complex, putative [Aedes aegypti] gi|108872562|gb|EAT36787.1| Anaphase Promoting Complex, putative [Aedes aegypti] Length = 577 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 3/121 (2%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 ++ A + A +P V + +V Y+ A + K E R Sbjct: 347 LQLKKYQEAIAHLRFAQQFAPYRYEVHKVLVDTYLNMNRLREAQAQALKALKTIGETPRL 406 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L +++ K + A+E + N + A A N +L+ Sbjct: 407 LVLLGRTYLKDDSTKAKAKTLFMKALEMNE---NYLPAVYMLADLYRQDNDASSCIKLLK 463 Query: 285 K 285 K Sbjct: 464 K 464 >gi|90019827|ref|YP_525654.1| hypothetical protein Sde_0178 [Saccharophagus degradans 2-40] gi|89949427|gb|ABD79442.1| Tetratricopeptide TPR_2 [Saccharophagus degradans 2-40] Length = 880 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 94/311 (30%), Gaps = 45/311 (14%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 GL++ NI LA + + L + IA ++ + +A + + Sbjct: 488 QGLVASIDKNIDLANESFKKALSIDSKSYTA--NLYQALIAANQQNWKLATQGFTNAIAS 545 Query: 150 PATREFAVYSLYF---------------ESC--RIGDLNSAQRYATKALDISPDAPWVTE 192 + L E+ + GD +A AT L Sbjct: 546 NPIQLAPYGGLLKSLAATESPNDVVTRFEALTGKNGDKTNAALIATDYLIQQNKTAEAQN 605 Query: 193 --AVVQQYVLAKEWSRA--------ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + L ++ S+A I + ++A N +A + + + Sbjct: 606 KFETINLAELKEQRSQASAVAEEIYINLIKLHVRDAANANDQKAAVAYLEQAQAQYPNNT 665 Query: 243 IA---------SYHDAIESLKLCDNS------IMASICAAKSLISQNKKRKAEVILEKIW 287 Y E+ L + +++ +A LI QN +A L+ W Sbjct: 666 KLLSLAAAYYLQYDKLAEAAALASKLRQLNENVYSTLISADILIKQNDYAQAISSLKSEW 725 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHA 346 K P+ +IA + + L+ E+ V+ + A + G I A Sbjct: 726 KREPNQDIALAIQKAALASNTDLDEDFLQSWEVAFPNQVQPHFYRANKAQQSGDIVLALK 785 Query: 347 KAMLAMKIAPR 357 ++I P Sbjct: 786 HYEKIIEINPS 796 Score = 38.8 bits (89), Expect = 2.4, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 73/260 (28%), Gaps = 38/260 (14%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP--ATREF 155 A + ++ + E + L A + L + Q R Sbjct: 255 GRYADAAPYSNALANANPNWQETQDRMANAIANLQSGDLEAAEKILMQIQQDNPNQGRSA 314 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A+ + + GD A Y +D AP T A + + A+ L Sbjct: 315 ALLGIIN--LQKGDSEKASEYFADNIDPETAAPIFTGAAALAQLQQNQIDSALQMLETAL 372 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + R + +A + I + A + + + M + A + + Sbjct: 373 EANPDNKRLLVLYGLAATRTQDLYQKGIEALQQA--ASQGEPDYRMHTTL-ADGYFNGKE 429 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 KA LEK + I +++ ++K Sbjct: 430 IAKATAELEKA-------------------------------QAIAPDNIALRYHIAKRY 458 Query: 336 LEMGSIDQAHAKAMLAMKIA 355 L G ID A A A +K Sbjct: 459 LANGLIDNAKAFAQAQLKKD 478 >gi|291042672|ref|NP_001166973.1| transmembrane and tetratricopeptide repeat containing 4 [Danio rerio] gi|169154660|emb|CAQ13663.1| novel protein similar to vertebrate transmembrane and tetratricopeptide repeat containing 4 (TMTC4) [Danio rerio] Length = 739 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 +++W + A + AD+G+ A+ E+++L Sbjct: 458 RSQQWRSEQSLFTSALSVCP----LNAKVHYNVGKNLADRGNQSAAVQYYREAVRLHPKY 513 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A L +N+ ++AE +L V+ P+ A + +L Sbjct: 514 VHAMNNLGNILKERNELKEAEELLSAA--VHIQPDFAAAWMNL 554 >gi|320162285|ref|YP_004175510.1| O-antigen polymerase family protein [Anaerolinea thermophila UNI-1] gi|319996139|dbj|BAJ64910.1| O-antigen polymerase family protein [Anaerolinea thermophila UNI-1] Length = 770 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 86/305 (28%), Gaps = 46/305 (15%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREF--AVYSLYFES---CRIGDL---NSAQRYA 177 + A + + A E + +L+ A L E+ GD ++ + Sbjct: 462 QASRAYEQGDFIAAAETYQEVLRRSPQDILYRAQAGLA-EAWAWQASGDARWLERSREHL 520 Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + P APW A+ YV +A L + + A RN + Sbjct: 521 ENVVAQEPAPAPW-HAALAGVYVAEGNLEQAWQALQEARARA----RNEPSYALYAGWIA 575 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 G + E L+L I A + R+ E + P P Sbjct: 576 EQLGWQEQALTAYREGLRLDP------ILAGSPFWEETALRRQAR--EGTAFIQPQPYWQ 627 Query: 297 NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + L + + +R ++ + ++AL G D A A Sbjct: 628 EALSALEAGDISEARRRIAFSRFAGEKGFAPQAVEWRVALAAGEEDWALRAAK------- 680 Query: 357 RKEIFLLLAQIEQANSHNTDK-ILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKTL 415 L +E+ S + + A+ D + +L L P L Sbjct: 681 -----TLRDGLERYFSGWRGYNLAGYLNRAVF-PAD---------VPPNFLALFPQDGRL 725 Query: 416 CYFEW 420 W Sbjct: 726 DALAW 730 >gi|312372036|gb|EFR20087.1| hypothetical protein AND_20684 [Anopheles darlingi] Length = 915 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 18/180 (10%) Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN---AKEWNRNRAILLIARSLENADK 239 I P A ++A +++++ A L+ + A E + + + R Sbjct: 449 ILPGAESASQAEIERHLEMGRDFLARGQLSDALTHYHAAVEGDPSNYLTYFKRGTVYFAL 508 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANI 298 G + D L+L + A A + AE L + + +PH P+ Sbjct: 509 GKAKFAVSDFSRVLELKPDFTAARAQRASVFLKMGDFDNAETDLMVVLRHDPHNPDANQQ 568 Query: 299 YTHL--------------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 Y+ + + + +L E SVE +++ L +G A Sbjct: 569 YSRIGPARDQWYLCVDVMERGDYTTAIALLTQLLEYCPWSVEIREARAQMYLRIGDRMAA 628 >gi|302851112|ref|XP_002957081.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f. nagariensis] gi|300257637|gb|EFJ41883.1| hypothetical protein VOLCADRAFT_98115 [Volvox carteri f. nagariensis] Length = 572 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 55/185 (29%), Gaps = 8/185 (4%) Query: 126 EVQIALAER-QYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKAL 181 + + + A L + A++ +L + A R + A+ Sbjct: 39 QASALHSSGTDLHRAEALYRRFLAVQPRHAHALHQLGALLTQLYGKEKDAEALRLVSSAV 98 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P + ++ + A W A + E + +++ + ++G Sbjct: 99 QLQPASAKFRNSLGVVHRTAGRWREAADAFERA----NEKDPLNVAVMMNLARALREEGR 154 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 + KL + A L S A + +++P + A + Sbjct: 155 QQRAAEVYGAVTKLQPDHPSAHYRRGAILRSIRHNEAALAAFRQHLRLHPEHQAAKFWVA 214 Query: 302 LLSEN 306 ++ + Sbjct: 215 AITGD 219 >gi|261333092|emb|CBH16087.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 776 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 12/142 (8%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIES 252 W A+ L + + + A++++A + ++GD+ A+ + Sbjct: 376 SKGGAWEEALQCLTAAAGIRIDGEKDAVLAQHHAVVVMAYARLVEERGDVAAARSALAKC 435 Query: 253 LKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 ++ A I AA + +A+ +L ++P PE+ + L S Sbjct: 436 IRHFP-FKTACCPRLWIEAAALEERHGEFVQAQKLLAASLNISPCPEVFDAALRLESNAC 494 Query: 308 VGKLKRALRLEEINKESVESLV 329 A + ++ ES + Sbjct: 495 AAGEVSAESCVQRSRAIYESAI 516 >gi|224367223|ref|YP_002601386.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family protein) [Desulfobacterium autotrophicum HRM2] gi|223689939|gb|ACN13222.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family protein) [Desulfobacterium autotrophicum HRM2] Length = 450 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 11/200 (5%) Query: 99 NIPLARKMHSYVSQQH-----TFHNEYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPA 151 N A + Q LL A L + + + A E ++ Sbjct: 31 NAASAHRQGRLAEAQKGYEKVLEQRPDWGQLLNALGAVYLDQSRPDRAKAMFERAARLNP 90 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A Y+L D + A LD PD V + Y + AI+ Sbjct: 91 PHLSACYNLGRMKQLENDHSGAITIYRAMLDAQPDMGEVWNNIGVAYREIGKPDEAISSF 150 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + A + + + + + +++++ + A + SL Sbjct: 151 RKAV--GFAPEMAEAWNNLGVAQDELHLTE--KASDSYGKAIEIQPDYASAHLNLGISLQ 206 Query: 272 SQNKKRKAEVILEKIWKVNP 291 + + ++A K+ ++ P Sbjct: 207 NSGQLKEAGKHYSKVLEIQP 226 >gi|158521641|ref|YP_001529511.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3] gi|158510467|gb|ABW67434.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3] Length = 474 Score = 40.7 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 42/151 (27%), Gaps = 7/151 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL A +++ A Y L + A + K + SP P Sbjct: 274 ALCPGDS-AAIRHFTALVEQNPADPSARYGLGLALLQNNRPADAIAHLEKVAEKSPFHPH 332 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDMIASYHD 248 + + + + +A++ L + +N R A + E I Y Sbjct: 333 ALTDLGKAHYFTGAYEKALSILER-VPPTDFYNTER-YFYTAMAAEKLGLHDKSITLYKR 390 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKA 279 I+ + A K Q A Sbjct: 391 IIQQ---EPRYLPALYELGKVAGEQGNLDDA 418 >gi|328866496|gb|EGG14880.1| anaphase promoting complex subunit 3 [Dictyostelium fasciculatum] Length = 1033 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 53/194 (27%), Gaps = 18/194 (9%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 + A K+ Q L L+ + A L+I A A Y Sbjct: 819 DHESALKIFKRAIQLDNSFTYAYT--LCGHEYLSNDDLDNAQNYYRSALKIDARHYNAWY 876 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ------QYVLAKEWSRAITFLN 212 L R+ + A+ + KAL I+P +V+ K A++ L Sbjct: 877 GLGLIYFRLEKYDLAEYHFRKALTINP-----FSSVLYCHIGITLQANRKH-LEALSMLQ 930 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 Q + + ++ G + + + +L I K Sbjct: 931 QAI----DLQPRNTLAKFKKASILYQLGQYQEALTELDQFKELAPKETPLYILMGKIYKK 986 Query: 273 QNKKRKAEVILEKI 286 + A L Sbjct: 987 LGQLDMALNCLTTA 1000 >gi|326800753|ref|YP_004318572.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium sp. 21] gi|326551517|gb|ADZ79902.1| Tetratricopeptide TPR_1 repeat-containing protein [Sphingobacterium sp. 21] Length = 395 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 18/229 (7%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A ++ + + ++ L A +QY+ A K + ++ + +L Sbjct: 155 ASAYTAFNNGLKYMPGDSILTLYAGIAAQNNQQYDDAISKFKTLIPKSSDAYL---NLSD 211 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + GD SA +Y +A PD+ + + + + I + + A + + Sbjct: 212 AYLKKGDTASAVKYIDEAATKFPDSAKIINQKIVLNITTGNSEKVIKDIESQM--AADPS 269 Query: 223 RNRAILLIARSLENADKGD-MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + + E+ + D + +Y IE+ + A+ AA L A Sbjct: 270 NGELPFFLGYAYESTKQPDKALEAYKKGIEAKPDDARNYGAA--AAIILNKARDIYNAAS 327 Query: 282 IL----EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + E +K + YT L++ V L++A L+ K E Sbjct: 328 SIPTNKEAEYKAK----LQEAYT--LADTAVPYLEKATTLDPKTKGYWE 370 >gi|254411807|ref|ZP_05025583.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196181529|gb|EDX76517.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 639 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 64/194 (32%), Gaps = 7/194 (3%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G SA T+A+ ++P + + A Q + + Sbjct: 394 QGKTQSALADLTQAIQLNPQNADAYYQRGNLRLELGDRQGAKADYTQVLQRDPNFTP--- 450 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + R AD G A+ +D ++++L N + A + +S + ++ A Sbjct: 451 -AWVNRGQIQADLGHEQAAINDYTQAIQLKPNLVTAYLKRCRSRSNLGNQKGAIDDCTTA 509 Query: 287 WKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 + P+ +A ++ G + ++N E+ ++ E+ Sbjct: 510 INLRPNQALAYQNRGLARQRRGDSRGAITDYTVAIQLNPEAADAYYNRGVARQEIEDTLG 569 Query: 344 AHAKAMLAMKIAPR 357 A A A++ P Sbjct: 570 AIADYTQAIERNPD 583 Score = 37.2 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 51/186 (27%), Gaps = 21/186 (11%) Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 +A Y ++A+ P + Y + A+ L Q + A Sbjct: 363 PEAAIDYYSQAITYQPQNATAYYYRGKIYANQGKTQSALADLTQAIQLNP----QNADAY 418 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 R + GD + D + L+ N A + + ++ A + ++ Sbjct: 419 YQRGNLRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYTQAIQL 478 Query: 290 NPHPEIANIYT-HLLSENTVGKLKRA----LRLEEINKESVESLVIVSKIALEMGSIDQA 344 P + Y S + +G K A + AL + A Sbjct: 479 K--PNLVTAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQ----------ALAYQNRGLA 526 Query: 345 HAKAML 350 + Sbjct: 527 RQRRGD 532 >gi|94498614|ref|ZP_01305167.1| TPR repeat-containing protein [Sphingomonas sp. SKA58] gi|94421909|gb|EAT06957.1| TPR repeat-containing protein [Sphingomonas sp. SKA58] Length = 675 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 57/179 (31%), Gaps = 5/179 (2%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSA 173 +L+ + A Q A E I R+ A+ L G+ A Sbjct: 453 RANPGAPAAWLILGDLLQANGQGQAAVRAYEAGANIRFDRDAALR-LVSALQATGNGARA 511 Query: 174 QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 ++ A L P + V ++W A L + + N A+L+ + Sbjct: 512 EQVAQLFLRQHPMDRDMLRVAAGYAVGREDWRGAERLLQALRAQIGD---NDALLMTDLA 568 Query: 234 LENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291 + ++ A+ A L + + L+ + K A +LEK + P Sbjct: 569 RVSLEQRKESAALAYARHGYALMPGNPATADMLGWVLLRTDAKGPAAVDLLEKAVALAP 627 >gi|300795419|ref|NP_001178666.1| tetratricopeptide repeat protein 21B [Rattus norvegicus] gi|109470008|ref|XP_001056795.1| PREDICTED: tetratricopeptide repeat domain 21B-like [Rattus norvegicus] Length = 1315 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 100/320 (31%), Gaps = 66/320 (20%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA------------- 139 +++A + A M L + Q E + +A Sbjct: 662 LALAQGDTERALSM--------------LRNVTTEQPYFIEAKEKMADIYLKHRKEKMLY 707 Query: 140 HEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + P+ R F + I + A +AL+ +P + + + Sbjct: 708 ITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQALNQNPKDGTLARKIGKAL 765 Query: 199 VLAKEWSRAITFLNQKKKNAKE----------------WNRNRAILLIARSLENADK--G 240 V +S+AIT+ K+ ++ + + +L + + + ++ Sbjct: 766 VKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKAEKVLQHSLAHDPVNELSA 825 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HP 293 M+ + + AA + + R IL+++ P H Sbjct: 826 LMVDGRSQVLLAKVYSKMERPGDAIAALQQARELQAR----ILKRVQMEQPDAVPSQRHF 881 Query: 294 EIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKA 348 A I + + + ++A+ E+ ++ ++++ L +D + Sbjct: 882 A-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLELAQLYLAQEDLDASLRHC 940 Query: 349 MLAMKIAPR-KEIFLLLAQI 367 L ++ + +L+A + Sbjct: 941 ALLLQRDQDNEPATMLMADL 960 >gi|300867781|ref|ZP_07112424.1| putative MCP methyltransferase, CheR-type with Tpr repeats [Oscillatoria sp. PCC 6506] gi|300334198|emb|CBN57596.1| putative MCP methyltransferase, CheR-type with Tpr repeats [Oscillatoria sp. PCC 6506] Length = 578 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 53/153 (34%), Gaps = 8/153 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPW 189 E + + + + +L E+ + A + A + +D+ P Sbjct: 389 ENNTVNTRQISSSLTVEKERQRAGI-NLLQEAEAFCKNKTYFEAIKKAEQVIDLYPHNFK 447 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + Y ++ +AI + +Q + + + + GD+ A+ + Sbjct: 448 AYYLLAEIYANLGKYEQAINYCHQAIQ----VDSLSVFPYHLLAHIAEENGDVEAAKNLL 503 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + LC + I A + + ++A+ + Sbjct: 504 KKIIYLCPSFISAYLDLGNIYAGEGNVKRAKKM 536 >gi|302664426|ref|XP_003023843.1| hypothetical protein TRV_02040 [Trichophyton verrucosum HKI 0517] gi|291187861|gb|EFE43225.1| hypothetical protein TRV_02040 [Trichophyton verrucosum HKI 0517] Length = 571 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV----VQQYVLAKEWSRAITF 210 + L R DL ++Q T+ SP P V+ A+ + + ++ A++ Sbjct: 54 AGMPGLLTNHNR-DDLRASQHLLTQLEGASPPDPEVSTALNLLKIDLLMRQGDYDDALST 112 Query: 211 LNQKKK--NAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLC 256 ++Q + + ++ I LLIA++ G + A+ + K+ Sbjct: 113 VDQVAQSMHQDSFDIATQISLLIAKARIFDRTGQPERGFSLAMRAAKIA 161 >gi|114158711|ref|NP_001041069.1| tetratricopeptide repeat protein 21B [Mus musculus] gi|123792576|sp|Q0HA38|TT21B_MOUSE RecName: Full=Tetratricopeptide repeat protein 21B; Short=TPR repeat protein 21B; AltName: Full=Tetratricopeptide repeat-containing hedgehog modulator 1 gi|67764064|gb|AAY79164.1| tetratricopeptide repeat-containing hedgehog modulator 1 [Mus musculus] gi|123233021|emb|CAM21880.1| tetratricopeptide repeat domain 21B [Mus musculus] gi|123857418|emb|CAM17348.1| tetratricopeptide repeat domain 21B [Mus musculus] Length = 1315 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 104/338 (30%), Gaps = 75/338 (22%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIA--------------HEK 142 A K+ + + E L V + +ALA+ + A E Sbjct: 630 GEQHEAAKVLQDAIHEFSGTCEELRVTIANADLALAQGDTDRALSMLRNVTTEQPYFIEA 689 Query: 143 LEMMLQI----------------------PATREFAVYSLYFESCRIGDLNSAQRYATKA 180 E M I P+ R F + I + A +A Sbjct: 690 KEKMADIYLKHRKEKMLYITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQA 747 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE----------------WNRN 224 L+ +P + + + V +S+AIT+ K+ ++ + + Sbjct: 748 LNQNPKDGTLARKIGKALVKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKA 807 Query: 225 RAILLIARSLENADK--GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +L + + E + M+ + + + AA + + R I Sbjct: 808 EKVLQHSLAHEPVSELSALMVDGRSQVLLAKVYSKMERPSDAIAALQQARELQAR----I 863 Query: 283 LEKIWKVNP-------HPEIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVI 330 L+++ P H A I + + + ++A+ E+ ++ Sbjct: 864 LKRVQMEQPDAVPSQKHFA-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLE 922 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQI 367 ++++ L +D + L ++ + +L+A + Sbjct: 923 LAQLYLAQEDLDASLRHCALLLQRDQDNEPATMLMADL 960 >gi|30022471|ref|NP_834102.1| TPR repeat-containing protein [Bacillus cereus ATCC 14579] gi|218233420|ref|YP_002369205.1| TPR domain protein [Bacillus cereus B4264] gi|228954680|ref|ZP_04116703.1| TPR domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071904|ref|ZP_04205115.1| TPR domain protein [Bacillus cereus F65185] gi|229081660|ref|ZP_04214155.1| TPR domain protein [Bacillus cereus Rock4-2] gi|229129676|ref|ZP_04258644.1| TPR domain protein [Bacillus cereus BDRD-Cer4] gi|229152599|ref|ZP_04280788.1| TPR domain protein [Bacillus cereus m1550] gi|229192607|ref|ZP_04319568.1| TPR domain protein [Bacillus cereus ATCC 10876] gi|296504888|ref|YP_003666588.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171] gi|29898029|gb|AAP11303.1| Tetratricopeptide repeat family protein [Bacillus cereus ATCC 14579] gi|218161377|gb|ACK61369.1| tetratricopeptide repeat protein [Bacillus cereus B4264] gi|228590914|gb|EEK48772.1| TPR domain protein [Bacillus cereus ATCC 10876] gi|228630860|gb|EEK87500.1| TPR domain protein [Bacillus cereus m1550] gi|228653793|gb|EEL09663.1| TPR domain protein [Bacillus cereus BDRD-Cer4] gi|228701664|gb|EEL54155.1| TPR domain protein [Bacillus cereus Rock4-2] gi|228711200|gb|EEL63164.1| TPR domain protein [Bacillus cereus F65185] gi|228805007|gb|EEM51603.1| TPR domain protein [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|296325940|gb|ADH08868.1| TPR repeat-containing protein [Bacillus thuringiensis BMB171] Length = 219 Score = 40.7 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|329897173|ref|ZP_08271913.1| hypothetical protein IMCC3088_2584 [gamma proteobacterium IMCC3088] gi|328921328|gb|EGG28722.1| hypothetical protein IMCC3088_2584 [gamma proteobacterium IMCC3088] Length = 567 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 34/280 (12%), Positives = 88/280 (31%), Gaps = 15/280 (5%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGD 169 + Q+ +E + L + AL + Y A + + E + + + +GD Sbjct: 34 IRQEAPIPDELVYDFLLAEFALRQGDYRQALRLYQDLATQVDDVEVSARA-TRIAQFLGD 92 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++ + L P+ P + ++A + + + +L Sbjct: 93 ESAVSVLVKRWLAQEPNNPEAGRLAGILALRRGAGAKAFDYFYDAAQEGAIVD--FGMLA 150 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 A ++ + +++ DA + A A +A + ++ Sbjct: 151 RAYPDLSSPEREILKQRIDAKLDGSQERSLTFARALMA---AEDGDNTRALTFVNELLAA 207 Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P A + L E+ + L +A + N + +++ L + A Sbjct: 208 EPQNIQALMLQARLQLSLKHESPLDGLAQA---VKTNPNNEALRQHYAQL-LAGTDVSAA 263 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQS 384 + + PRK +L+ + +++ + + Sbjct: 264 RTQYEILSADHPRKGEYLMALALLNKELNDSLAAKAYLRQ 303 >gi|326478361|gb|EGE02371.1| DnaJ domain-containing protein [Trichophyton equinum CBS 127.97] Length = 771 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199 Q P Y + GD + A ++ +AL + PD+ + + + Sbjct: 471 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 526 Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 A+++ AI + + + LL R+ + + + + D +L+ Sbjct: 527 NAAFKARKYREAIDLYTKGLEVDPNNKDINSKLLQNRAQAHININEYDKAIRDCTSALEC 586 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 N I A AK+ +A L+ I + NP Sbjct: 587 DPNYIKARRVRAKANGGAGNWDEALKELKDIAENNP 622 >gi|319956570|ref|YP_004167833.1| tetratricopeptide tpr_1 repeat-containing protein [Nitratifractor salsuginis DSM 16511] gi|319418974|gb|ADV46084.1| Tetratricopeptide TPR_1 repeat-containing protein [Nitratifractor salsuginis DSM 16511] Length = 211 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 12/153 (7%) Query: 76 LHKRNYDKGY--KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 + G + L S+ + A+K + E L L + + Sbjct: 54 FSRSTEKPGRIEELLSIADESLEKGDNLEAKKALQSALILDENNPEILRRL--GVVYMNM 111 Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SPDAPW 189 Y+ A + E +L++ + A SL ++G+ +A R +AL + +P Sbjct: 112 NDYSDARKTYEKLLELDPNDDLAHGSLANALHKLGEEEAALREHHEALRLDPDYAPHHYN 171 Query: 190 VTEAVVQQYVLAK---EWSRAITFLNQKKKNAK 219 + + E+ +A+ L+ K AK Sbjct: 172 YANTLYDLGRREEALAEYRKALE-LDSDLKEAK 203 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 5/146 (3%) Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + P R + S+ ES GD A++ AL + + P + + Y+ Sbjct: 52 KTFSRSTEKPG-RIEELLSIADESLEKGDNLEAKKALQSALILDENNPEILRRLGVVYMN 110 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 ++S A + E + N + + + G+ A+ + E+L+L + Sbjct: 111 MNDYSDARKTYEKLL----ELDPNDDLAHGSLANALHKLGEEEAALREHHEALRLDPDYA 166 Query: 261 MASICAAKSLISQNKKRKAEVILEKI 286 A +L ++ +A K Sbjct: 167 PHHYNYANTLYDLGRREEALAEYRKA 192 >gi|307128870|ref|YP_003880886.1| cellulose synthase operon protein C [Dickeya dadantii 3937] gi|306526399|gb|ADM96329.1| Cellulose synthase operon protein C precursor [Dickeya dadantii 3937] Length = 1298 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 77/246 (31%), Gaps = 15/246 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL + A +LQ A+ + + + R GD +A Y +A + Sbjct: 276 TALNSGDLSNAQTAFSQVLQANPEDADALAGMGYAAQRRGDFAAAASYLERAARQGGENS 335 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A QQ + + Q KN L ++ L A + + Sbjct: 336 ----AQRQQQADDARFYAQLANAQQAMKNGDTAQ----ALTLSEPLAQAGGDKGLTAKLF 387 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L+ +N A L + R A+ L + + + AN L EN V Sbjct: 388 RADVLRRTNNFPQAERLYRDVLQTDADNRNAKEGLYYVLREQNRADEANTLFAALPEN-V 446 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367 + + E +K AL G +A ++ P L LA+I Sbjct: 447 RRSMAPRPVATSAPVRNE-----AKQALAAGDTVRAIGLLQQGIQRFPNDGWLKLDLARI 501 Query: 368 EQANSH 373 Q + Sbjct: 502 YQQQGN 507 Score = 36.8 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 55/188 (29%), Gaps = 14/188 (7%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIA---HEKLEMMLQIPATREFAVYSLYFESC 165 + E L Y+L Q E A M P V + ++ Sbjct: 410 QTDADNRNAKEGLYYVLREQNRADEANTLFAALPENVRRSMAPRPVATSAPVRNEAKQAL 469 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 GD A + + P+ W+ + + Y + A + + + + Sbjct: 470 AAGDTVRAIGLLQQGIQRFPNDGWLKLDLARIYQQQGNMAAATSLMQPLFRAGAGADDLY 529 Query: 226 AILLIA-------RSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKSLISQNKKR 277 A L A ++ + D + ++ N MA+ A+ +S+ + Sbjct: 530 AAALFASENNAWQQASTLLSRIPPRNQNEDTRSLARRVNFNLQMAT---AQVYLSRGENA 586 Query: 278 KAEVILEK 285 A L Sbjct: 587 AAANTLRA 594 >gi|301330352|ref|ZP_07222999.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] gi|300843686|gb|EFK71446.1| tetratricopeptide repeat protein [Escherichia coli MS 78-1] Length = 1093 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623 >gi|238498556|ref|XP_002380513.1| cell cycle control protein (Cwf4), putative [Aspergillus flavus NRRL3357] gi|220693787|gb|EED50132.1| cell cycle control protein (Cwf4), putative [Aspergillus flavus NRRL3357] Length = 670 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 88/275 (32%), Gaps = 32/275 (11%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182 ++Y A + + ++P ++ ++ Y + GD +Y + L Sbjct: 257 KEYERARAIYKYALDRLPRSKSVTLHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-EN 236 +P + + + + R + R L I ++ E Sbjct: 316 ENPRNYDIWFDFTRLEETSGDPERVRDTYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEE 375 Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D+ + E LKL + A+ I Q + + A L + + P Sbjct: 376 MEAKDVERARQIYNECLKLIPHKKFTFAKIWLMKAQFEIRQMELQTARKTLGQAIGMCPK 435 Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ Y L E + + E N + +S + +++ + D+A A Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSNSQSWIQFAELERGLDDSDRARAIFE 494 Query: 350 LAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380 L ++ P + ++ E+ D++ Sbjct: 495 LGIEQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527 >gi|213408162|ref|XP_002174852.1| chaperone activator Sti1 [Schizosaccharomyces japonicus yFS275] gi|212002899|gb|EEB08559.1| chaperone activator Sti1 [Schizosaccharomyces japonicus yFS275] Length = 582 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 41/148 (27%), Gaps = 22/148 (14%) Query: 129 IALAERQYNIAHEKLEMMLQIPA-----TREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 + + A E + L T+ + A+ A + + Sbjct: 339 AYQKQGDFTNAIEYFQRSLTEHRSPDILTKL-------------KETEKAKEKADREAYV 385 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P+ A + A +++ AI + K A R R+ Sbjct: 386 NPELAEQARAKGNELFKAGDFAGAIKEYTEVTKRAPNDPRG----FSNRAAAYLKVMAPA 441 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLI 271 + D ++ + A + A+ L Sbjct: 442 EAIRDCNTAIGIDATFAKAYLRKAQGLF 469 >gi|148668306|gb|EDL00636.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_a [Mus musculus] gi|148668307|gb|EDL00637.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_a [Mus musculus] Length = 719 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 459 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 514 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 515 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 567 >gi|121701957|ref|XP_001269243.1| cell cycle control protein (Cwf4), putative [Aspergillus clavatus NRRL 1] gi|119397386|gb|EAW07817.1| cell cycle control protein (Cwf4), putative [Aspergillus clavatus NRRL 1] Length = 676 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 93/278 (33%), Gaps = 38/278 (13%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182 ++Y A + + ++P ++ A++ Y + GD +Y + L Sbjct: 257 KEYERARAIYKYALDRLPRSKSMALHKAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315 Query: 183 ISPDA--PWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSL 234 +P WV A +++ + + R + + + W R + + Sbjct: 316 ENPRNYDVWVDFARLEE--TSGDVDRVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYAIW 373 Query: 235 ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 E + DM + E L+L + A+ I Q A L + + Sbjct: 374 EEMEAKDMDRARQVYTECLRLIPHKKFTFAKIWLLKAQFDIRQMDLSAARKTLGQAIGMC 433 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEE----INKESVESLVIVSKIALEMGSIDQAHA 346 P ++ Y L E + + R L E N + +S + +++ + ++A A Sbjct: 434 PKDKLFRGYIDL--ERQLFEFVRCRTLYEKQIEWNPSNSQSWIQFAELERGLDDSERARA 491 Query: 347 KAMLAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380 L + P + ++ E+ D++ Sbjct: 492 IFELGIDQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527 >gi|260845179|ref|YP_003222957.1| hypothetical protein ECO103_3070 [Escherichia coli O103:H2 str. 12009] gi|257760326|dbj|BAI31823.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009] gi|323159273|gb|EFZ45260.1| tetratricopeptide repeat family protein [Escherichia coli E128010] Length = 1093 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623 >gi|86610135|ref|YP_478897.1| TPR repeat-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558677|gb|ABD03634.1| tetratricopeptide repeat protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 643 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 85/258 (32%), Gaps = 26/258 (10%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + +L QI L Q++ A + L++ R +++ Sbjct: 345 AEALAQQQKALGLDPHFSEAHLCVAQIRLKLGQWDEAIDSCWAALELND-RLGLGHAVMG 403 Query: 163 ESC-RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL---AKEWSRAITFLNQKKKNA 218 ++ R G L +A AL++ V + A ++A +Q N Sbjct: 404 QALMRKGQLKAAIAAFRTALNLDLAPELAAGVRVDLGLAMVHAGHLAQASQEFSQVIFNG 463 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN-KKR 277 + + R +A L A + + + +L+L + A AA L K+R Sbjct: 464 Q-FKRQQARAYYGLGLVLASQEQYSEAVKNYRRALELAPDLHEA--MAAIGLAYLGPKQR 520 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 A + + + +++ + + + + E+ + + + Sbjct: 521 DAS---------------GRKF--IQPQQLQQAIQQFEQALKGDPDLPEAHFGMGEASRI 563 Query: 338 MGSIDQAHAKAMLAMKIA 355 G + A A A++ Sbjct: 564 KGDLTSAEASYRRAIRSN 581 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 9/119 (7%) Query: 157 VYSLYFESCRI-GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 +YSL ++ G+ A KAL + P V Q + +W AI Sbjct: 330 IYSLLGQAWAEKGNWAEALAQQQKALGLDPHFSEAHLCVAQIRLKLGQWDEAIDSCWAAL 389 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 E N + KG AI + + N +A AA + Sbjct: 390 ----ELNDRLGLGHAVMGQALMRKGQ----LKAAIAAFRTALNLDLAPELAAGVRVDLG 440 >gi|78357165|ref|YP_388614.1| TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219570|gb|ABB38919.1| TPR repeat [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 483 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 87/238 (36%), Gaps = 33/238 (13%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + TR + +L R D +A Y + + P+ + + +V Y + S A Sbjct: 275 KDDNTRFRRIQTLIRA--RFADQEAAMHYFNNSGTLPPELALMGKGIV--YARQNKISTA 330 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 F +Q A + A++L + +KGD + ++ + +MA A Sbjct: 331 AEFFDQAVSLAP----SDALVLREAGRFHYNKGDSKRAAGLLQRAVMNNPHDLMALFFFA 386 Query: 268 KSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 + L + KA ++ + P E+ Y +L EN +L E Sbjct: 387 RLLADNGQVDKAVEYYRQVLQKLPEDSEVHYYYGRMLGENN--RL-------------FE 431 Query: 327 SLVIVSKIALEM---GSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 + ++ AL ++ +A + K A++E+ ++ + ++ +W Sbjct: 432 GHLQLAYSALYANNKRKVEFHRKQAETLARTEDDK------AELERFDTRHAERAEFW 483 >gi|186685148|ref|YP_001868344.1| hypothetical protein Npun_F5064 [Nostoc punctiforme PCC 73102] gi|186467600|gb|ACC83401.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC 73102] Length = 307 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 18/168 (10%) Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS---------------LENADKGDMIASYHDAIE 251 AI +LNQ + + AI ++ L G + S Sbjct: 46 AIDWLNQGLQAIQAGKVKDAIAAFKQAAKLDPTLAPAYYNLGLAYRQTGQLQPSADAFYR 105 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---NTV 308 + + A +L+ N + A L++ +++P A+ L+ E + Sbjct: 106 ATQADPKFAPAFANLGGALLEGNNLQLANDYLQRALELDPKLGFAHYNFGLVREQQGDCE 165 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + E +K + E + L+ G +D+A A+KI P Sbjct: 166 KAIASFKQAIEYSKNAPEPPYHIGMCYLQQGKLDRARDAFNQAVKINP 213 >gi|330719091|ref|ZP_08313691.1| hypothetical protein LfalK3_07528 [Leuconostoc fallax KCTC 3537] Length = 425 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 47/147 (31%), Gaps = 14/147 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI----SP 185 A+ A + LQ + +Y+L E +G YA +A ++ P Sbjct: 13 AIESGDLVSAQNYFKKSLQNDSDEL--IYNLAEELYGMGFT----HYAKEAYELLLTRYP 66 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A+ + E A+ L+Q + + + + E ++ + Sbjct: 67 QEDSIRTALADIAIDDGEIDHALELLSQVNPESDAYVSSLLVKADLYQSEGLNEAAESSL 126 Query: 246 YHDAIESLKLCDNSIMASICAAKSLIS 272 + +L + + + A+ Sbjct: 127 RR----AQQLMPDHDIIQLALAEFYFD 149 >gi|303247915|ref|ZP_07334182.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] gi|302490639|gb|EFL50542.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio fructosovorans JJ] Length = 1624 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 85/265 (32%), Gaps = 12/265 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREF 155 I A NE L + + + A L + P RE Sbjct: 606 GRIEEAATFLEAALADDPDRNEA--RLYLALARKRQGRSDDAERLLAEAIAKASPFDRE- 662 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y+L + G N A + KAL ++P+ + + V+ V +++ A Sbjct: 663 --YALGEFAALDGKENEALAHFRKALTLAPNDDRMRQRVISLLVAGNDFTTARE--YADW 718 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A+ +RA+ A ++ + GD S + L N+ ++L Q + Sbjct: 719 YEARLAKDDRAVFGTA-AVVRLEMGDPAGSESLYRDLLAREPNASDYLAGLGRALNRQTR 777 Query: 276 KRKAEVILEKIWKVNPHPEI-ANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSK 333 ++ L K + P + A + L+ + A R + + E L ++ Sbjct: 778 YQETVDALGKAYAAKKSPVLGAIVCEALMGLGRYEDVVTEAARGLAAHPKDRELLRYAAE 837 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRK 358 + A + I P Sbjct: 838 ATEFTRDLPACEDYARRGLAIDPDS 862 >gi|241613489|ref|XP_002407411.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes scapularis] gi|215502791|gb|EEC12285.1| heat shock protein 70 (HSP70)-interacting protein, putative [Ixodes scapularis] Length = 589 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 13/181 (7%) Query: 190 VTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 EA++ ++L + LNQ ++ R LI + + Sbjct: 307 AAEALLLRGTFHLLQGRSQATLDDLNQLLSMDNISSKVRVNALIKLGTLKVHSEHLDEAL 366 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN--IYTH-- 301 D + +L + + + L+ ++ +E+ + P P A Y Sbjct: 367 QDFERAAELDPANADIFLHRGQVLMLLDRLEDTLQDMERTCTLRPDFPSAAAQRCYVQYR 426 Query: 302 --LLSENTVGKLKRALRLEEIN---KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + + + + K E+ ES + +++ E D+A A K P Sbjct: 427 CGMRATDPEQRQKALDGFAEVQQRFPNCPESYFLHAQLLTETQEFDKAEEYFRKAEKADP 486 Query: 357 R 357 Sbjct: 487 T 487 >gi|153006523|ref|YP_001380848.1| hypothetical protein Anae109_3685 [Anaeromyxobacter sp. Fw109-5] gi|152030096|gb|ABS27864.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 495 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 25/83 (30%), Gaps = 7/83 (8%) Query: 310 KLKRAL-------RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 +L R RL + + + V + L+ +A + +A+ + P + Sbjct: 63 RLARFEDAGDVWQRLVDESPVEPIARVNLGLAWLKAKRYPEAARQLEIALDLNPDHRKAM 122 Query: 363 LLAQIEQANSHNTDKILYWTQSA 385 + + W A Sbjct: 123 GYLGLALLEGGDPAAARGWFAKA 145 >gi|39942378|ref|XP_360726.1| hypothetical protein MGG_03269 [Magnaporthe oryzae 70-15] gi|145015730|gb|EDK00220.1| hypothetical protein MGG_03269 [Magnaporthe oryzae 70-15] Length = 1425 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 49/129 (37%), Gaps = 7/129 (5%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI----TFLNQK 214 +Y+E C D N A++ KA+++SP E + + ++W ++ Sbjct: 579 GIYYEEC-SKDKNRARKCFLKAVELSPSEVDAAERLARSLADERDWDGVELVSQRVVDSG 637 Query: 215 KKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K ++ + + +L A+ K D + +L++ + + + +S + Sbjct: 638 KVRPPPGSKRKGLSWPFAALGVAELNKQDYAKAVVSFQSALRISPDDYHSWVGLGESYYN 697 Query: 273 QNKKRKAEV 281 + A Sbjct: 698 SGRYIAATK 706 >gi|29345831|ref|NP_809334.1| TPR repeat-containing protein [Bacteroides thetaiotaomicron VPI-5482] gi|29337724|gb|AAO75528.1| tetratricopeptide repeat (TPR) family protein [Bacteroides thetaiotaomicron VPI-5482] Length = 683 Score = 40.7 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + Y+ A E LE +L++ TR + + S + D +A + AL++ P Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTVAALKDFNTALELDKYDPDAW 195 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A + ++ A + L++ + A I R+L + ++ + D Sbjct: 196 SARAIVRLQQSNYAEAESDLDRAI----HLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251 Query: 252 SLKLCDN 258 +L + N Sbjct: 252 ALDIDPN 258 >gi|330945606|gb|EGH47104.1| peptidase aspartic, active site protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 294 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 4/90 (4%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + GD ++A A +A+ P + +V + +++ A + + N Sbjct: 79 ALARGDNDTAVSEAREAVRSFPKQMAYRKLLVSALIAQGQYAEARSAATEALA----LNG 134 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESL 253 N A LL+ R GD + D +++ Sbjct: 135 NDATLLVQRGQMRQRLGDQDGARQDFAQAM 164 >gi|324020004|gb|EGB89223.1| tetratricopeptide repeat protein [Escherichia coli MS 117-3] Length = 1093 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623 >gi|229048103|ref|ZP_04193676.1| TPR domain protein [Bacillus cereus AH676] gi|228723258|gb|EEL74630.1| TPR domain protein [Bacillus cereus AH676] Length = 219 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|218696176|ref|YP_002403843.1| hypothetical protein EC55989_2835 [Escherichia coli 55989] gi|218352908|emb|CAU98707.1| conserved hypothetical protein [Escherichia coli 55989] Length = 1093 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623 >gi|65321762|ref|ZP_00394721.1| COG0457: FOG: TPR repeat [Bacillus anthracis str. A2012] Length = 222 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 14 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 74 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208 >gi|46202722|ref|ZP_00052716.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 344 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 57/192 (29%), Gaps = 8/192 (4%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A+ A K ++ L ++ + R+ A L +L R Sbjct: 84 AASGRSGPAEKSFKRALALAPDLSDAAENL--ARVLIETRRAGEALAPLHAVLAREPGRF 141 Query: 155 FAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + L + R GD+ A LD P+ + + + + A+ + Sbjct: 142 IS-RHLLGRALRDSGDMEGALAAFKAVLDAQPNFTAAINDLGLLHYACGKGAEALECFER 200 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K + + + R+L + LK ++ ++ K + Sbjct: 201 LLKLNPDDH----VAANNRALTLRVLNRPEEAEEQYRAILKRHPDAPEVNLNLGKLIART 256 Query: 274 NKKRKAEVILEK 285 + + A L K Sbjct: 257 GRAQDAAPFLAK 268 >gi|332527783|ref|ZP_08403822.1| putative porphyrin biosynthesis-like protein [Rubrivivax benzoatilyticus JA2] gi|332112179|gb|EGJ12155.1| putative porphyrin biosynthesis-like protein [Rubrivivax benzoatilyticus JA2] Length = 417 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 62/245 (25%), Gaps = 23/245 (9%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 + V+I W S + + I+ FA ++ P R Sbjct: 21 LGSNDGVVTIYWRGWRTDLSLNLFVLIVVGGAFAITSAAQAVNALVTLPKRAGEWRALRR 80 Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ--------QHTFHNEYLVYLLEVQIALA 132 AL L + A K S + L +LL Sbjct: 81 ERLAQAALREALAEYFSARYSRAHKAASRAIAIQQDSPELRADAEFSVLAHLLAAGSLHR 140 Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + E L M + D A+ A + DA E Sbjct: 141 LQDRTRRDELLRQMP------VAGRKGGVGAGRSVDD--GARLLAAEWALDDRDAGRALE 192 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS----YHD 248 + + ++A+ K + + R L AR L +A+ Sbjct: 193 LLAELPPGVARRTQALRL---KLQACRLARRPLEALHTARLLAKHQGFSPVAALGLLRSL 249 Query: 249 AIESL 253 A E+L Sbjct: 250 AFEAL 254 >gi|330863909|emb|CBX73998.1| uncharacterized protein yciM [Yersinia enterocolitica W22703] Length = 231 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 15/167 (8%) Query: 216 KNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K KE R A +L+ D+ + ++ SI + +++ Sbjct: 11 KLGKENQRLEIAHFYCELALQAMGSDDLDKAMSLLKKAASADKQCARVSIMQGRVHLAKG 70 Query: 275 KKRKAEVILEKIWK------VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + K LE++ + P ++ Y HL R E N + + Sbjct: 71 EYAKGVEALERVLEQDKEVVSEALPMLSECYQHLQQPEAWANF--LKRCVEDNTGAT-AE 127 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI-FLLL----AQIEQA 370 +++++I + D A ++ P + + L+ A E+ Sbjct: 128 LMLAEILEQHEGRDVAQTYINRQLQRHPTMRVFYRLMDYHLADAEEG 174 >gi|300927079|ref|ZP_07142831.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] gi|300416963|gb|EFK00274.1| tetratricopeptide repeat protein [Escherichia coli MS 182-1] Length = 1093 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623 >gi|227818413|ref|YP_002822384.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] gi|227337412|gb|ACP21631.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234] Length = 635 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 71/243 (29%), Gaps = 24/243 (9%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A A + AH+ + R A +AL + P Sbjct: 372 KSRSAEAGTRDVDAHDLF--LRGREMLRAV--------KKDRDMFEQATACFRQALALDP 421 Query: 186 D--APWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEW---NRNRAILLIARSLENADK 239 + AP + WS A L+ ++ A E + SL + Sbjct: 422 NYAAPCAGLGLAYVLDYQNHWSAAPETSLDAAERFADEAIGKDDQDPFNHFVVSLVAMFR 481 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 + A +L L N A + + + A +E+ +++P + Sbjct: 482 RNYRRWGESADRALALNPNFASALNMRGVLHLYTGEPKLAIPDIERAMRLDPAVQQQYLH 541 Query: 295 -IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + Y + + E+N + S ++ +G +D+A Sbjct: 542 FLGTAYF--VDGDYEKAATLFRDRIEVNPTTDLSRAFLASALGHLGRLDEARRIWGELKD 599 Query: 354 IAP 356 I P Sbjct: 600 INP 602 >gi|193064043|ref|ZP_03045128.1| tetratricopeptide repeat protein [Escherichia coli E22] gi|194427263|ref|ZP_03059813.1| tetratricopeptide repeat protein [Escherichia coli B171] gi|192929278|gb|EDV82887.1| tetratricopeptide repeat protein [Escherichia coli E22] gi|194414584|gb|EDX30856.1| tetratricopeptide repeat protein [Escherichia coli B171] Length = 1068 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 598 >gi|193068326|ref|ZP_03049289.1| tetratricopeptide repeat protein [Escherichia coli E110019] gi|192958278|gb|EDV88718.1| tetratricopeptide repeat protein [Escherichia coli E110019] Length = 1093 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623 >gi|326473847|gb|EGD97856.1| DnaJ and TPR domain-containing protein [Trichophyton tonsurans CBS 112818] Length = 771 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV-------- 199 Q P Y + GD + A ++ +AL + PD+ + + + Sbjct: 471 QDPDAVFLRGRLFYLQ----GDNDQALKHFKRALSLDPDSSQIIKFLRMVQKLLRIKDEG 526 Query: 200 ----LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 A+++ AI + + + LL R+ + + + + D +L+ Sbjct: 527 NAAFKARKYREAIDLYTKGLEVDPNNKDINSKLLQNRAQAHININEYDKAIRDCTSALEC 586 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 N I A AK+ +A L+ I + NP Sbjct: 587 DPNYIKARRVRAKANGGAGNWDEALKELKDIAENNP 622 >gi|324118241|gb|EGC12137.1| tetratricopeptide [Escherichia coli E1167] Length = 1093 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 623 >gi|323169442|gb|EFZ55115.1| tetratricopeptide repeat family protein [Shigella sonnei 53G] Length = 840 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 265 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 324 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + R G+ ++ + ++L P V VL+ A Sbjct: 325 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNAR 370 >gi|269148527|gb|ACZ28663.1| peptidase M48 family [uncultured organism] Length = 428 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 36/194 (18%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--------REFAVYS 159 + + L + N A + T R + S Sbjct: 180 AGLRALELLQTHPLTL------SRIADARNRAEQIATGSKGDNLTFQLIKARVRVLSGDS 233 Query: 160 LYFESCRIGD--LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +Y + + D +A +Y +AL+ W++ K++ +A + Q KN Sbjct: 234 IYLQRQKAADEIPQAAIQY-RQALN------WLS---------EKQYDKARNAIRQLLKN 277 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R + + + A++ +L L N++ + A++L+ + Sbjct: 278 ----DSQRVLYHLTAAEIELAADKPQAAHKVLASALILFPNNLPLTEMLAETLLKEGNVT 333 Query: 278 KAEVILEKIWKVNP 291 +A +LE+ + P Sbjct: 334 EASALLEQQLRYQP 347 Score = 38.4 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 77/240 (32%), Gaps = 33/240 (13%) Query: 69 PAMLFHMLHKRNYD-------KGYKA---LYTGLMSIAAHNIPLARKMHSYVSQQHTFHN 118 P L + RN KG L + + + + Y+ +Q Sbjct: 192 PLTLSRIADARNRAEQIATGSKGDNLTFQLIKARVRVLSGDSI-------YLQRQKAADE 244 Query: 119 EYLVYLLEVQIA--LAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLNSAQ 174 + Q L+E+QY+ A + +L+ + R +Y L +A Sbjct: 245 IPQAAIQYRQALNWLSEKQYDKARNAIRQLLKNDSQRV--LYHLTAAEIELAADKPQAAH 302 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 + AL + P+ +TE + + + + A L Q+ + E R L + Sbjct: 303 KVLASALILFPNNLPLTEMLAETLLKEGNVTEASALLEQQLRYQPE--RRLYTLHFQAAK 360 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK----AEVILEKIWKVN 290 D S + L+ D + + +I K I Q K + A WK Sbjct: 361 TARRYADAYQSLAE----LQYIDGNTVQAITYLKQAIEQGTKSQYEQLAMQARLAAWKKE 416 >gi|253567817|ref|ZP_04845228.1| tetratricopeptide repeat family protein [Bacteroides sp. 1_1_6] gi|251841890|gb|EES69970.1| tetratricopeptide repeat family protein [Bacteroides sp. 1_1_6] Length = 683 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 8/127 (6%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + Y+ A E LE +L++ TR + + S + D +A + AL++ P Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTVAALKDFNTALELDKYDPDAW 195 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A + ++ A + L++ + A I R+L + ++ + D Sbjct: 196 SARAIVRLQQSNYAEAESDLDRAI----HLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251 Query: 252 SLKLCDN 258 +L + N Sbjct: 252 ALDIDPN 258 >gi|257058790|ref|YP_003136678.1| hypotheticalprotein [Cyanothece sp. PCC 8802] gi|256588956|gb|ACU99842.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802] Length = 388 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 22/203 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE---- 154 + LA ++ + + + E + L+E A AE+ + + P T + Sbjct: 195 DSDLAEQLAAQLGIPSSNPQEIINALMEQFQAQAEQDQSQ---------ETPQTEQEWFN 245 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + E R GDL A +AL+I+P + AI ++ Sbjct: 246 LGL-----EQARQGDLEGAIASWDRALEINPSLAEGWHNRGSALGTLGRFDEAINSFDRA 300 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + +A L +L N + + + ++L++ A + +L Sbjct: 301 IY--LDAQDFQAWNLKGNALYNLQQWE--GAITCWDKALEVRPEFYQAWYNRSSALEELG 356 Query: 275 KKRKAEVILEKIWKVNPHPEIAN 297 + +A K ++ P E+A+ Sbjct: 357 RTEEAIAGYRKALEIEPTFELAS 379 >gi|254427253|ref|ZP_05040960.1| Sulfotransferase domain family [Alcanivorax sp. DG881] gi|196193422|gb|EDX88381.1| Sulfotransferase domain family [Alcanivorax sp. DG881] Length = 529 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A A+ ++P + Q + W++A+ LN+ K + N L A Sbjct: 60 AKTLAELAVKMAPKNWRSWQLSYQAHHADAHWAQALKSLNKIAKLSPSINAEH-YLAKAE 118 Query: 233 SLENADKGDMIASYHDAIESL 253 +LE + D + +++L Sbjct: 119 ALERLFRPDEALACLAELDAL 139 >gi|14042273|dbj|BAB55179.1| unnamed protein product [Homo sapiens] Length = 479 Score = 40.7 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + EW A + ADKG+ A+ + E+++L Sbjct: 198 RSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRNYREAVRLNPKY 253 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 254 VHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFEA 306 >gi|254422573|ref|ZP_05036291.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] gi|196190062|gb|EDX85026.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] Length = 248 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 52/175 (29%), Gaps = 14/175 (8%) Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYA 177 LL Q + A + L ++ T L + + GD A Sbjct: 52 TLLLRKQAGDEAKKGNHITAVKILSHLIVREPTNPENLVNRGLMYSNLGRGDD--ALADY 109 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A++++P + + W AI ++ R R + +++ Sbjct: 110 NRAIELNPKFDRAFSNRGNLHAIRHNWQDAIADYDEAIDLNPLNIRAR----LNQAVTFR 165 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + G+ + +L S + ++ Q + +A + H Sbjct: 166 EMGNYEEALICLDIALFFRPKSAVLYAERGRTYHLQGYRNRA----IAAYTTACH 216 >gi|182412282|ref|YP_001817348.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177839496|gb|ACB73748.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 1087 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 15/182 (8%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L++ + R +L + + + A E L+ + A + + Sbjct: 518 RALDEFLMPGRATRRVPRLLATGWAYFGLKEW--ARAGSCACEVLRSDPDQAEAHLLLGR 575 Query: 269 SLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKE 323 SL+ R L++ ++ P +A Y + + + LE Sbjct: 576 SLMRSENIRDGLTSLQRATELAPSEAAAWRALAEAYAQIE-DAAAALVAAERALEHGRDV 634 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP---RKEIFLLLAQ----IEQANSHNTD 376 S +V+ AL + + ++A A ++ P R + +LLLA+ I + + Sbjct: 635 DYRSHFLVAWAALTVTNHERARAVLAQILQAQPGNLRAKRWLLLAEGQANIPKGEISPSA 694 Query: 377 KI 378 +I Sbjct: 695 RI 696 >gi|10435748|dbj|BAB14659.1| unnamed protein product [Homo sapiens] Length = 512 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 9/164 (5%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + + + RAI + + + W R + + E + D + SL+L Sbjct: 170 EAEAVREAYERAIANVPP-IQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLEL 228 Query: 256 CD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---SENTV 308 I A+ I Q A L P ++ +Y L E Sbjct: 229 IPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDR 288 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + K + E E+ S + +++ +G ID+A A LA+ Sbjct: 289 CR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAI 331 >gi|332847547|ref|XP_003315475.1| PREDICTED: dnaJ homolog subfamily C member 7 isoform 2 [Pan troglodytes] gi|332847549|ref|XP_003315476.1| PREDICTED: dnaJ homolog subfamily C member 7 isoform 3 [Pan troglodytes] Length = 438 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C + A ++ Sbjct: 123 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 178 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 179 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 238 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R N+ + + D ++KL D I A + A+ + + +A EK+ Sbjct: 239 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 298 Query: 287 WKVN 290 ++ Sbjct: 299 YQTE 302 >gi|126297642|ref|XP_001365692.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 483 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 24/197 (12%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR- 223 G+ A +KA++++P + Y+ ++S A L + A + Sbjct: 1 MSSGEWEKAVLSFSKAINLNPQLVEAYVLRAEAYIQLCDFSSASQNLRKAIVLAPYRPQL 60 Query: 224 --NRAILLIARSLENADKGDMIASYHDAIESLKLCD-----NSIMASICAAKSLISQNKK 276 +L + ++ + + ++ +L + A K Sbjct: 61 IDRLCFVLYVQGQCLFEEESYLKALDVFTQASELQPLKSSYRFRSIACLLA-----MKKH 115 Query: 277 RKAEVILEKIWKVNPHPEI----ANIY-THLLSENTVGKLKRALRLEEINKESVESLVIV 331 ++ I+ K K + +P++ A +Y L L RALR I E E+ ++ Sbjct: 116 QECLGIITKELKQHANPDVYILRARLYNFFLKPNQCYQDLHRALR---IKPEHPEANTLL 172 Query: 332 SKIALEMGSIDQAHAKA 348 K+ ++ A +A Sbjct: 173 EKLLMQARK---AREEA 186 >gi|75910095|ref|YP_324391.1| photosystem I assembly protein Ycf3 [Anabaena variabilis ATCC 29413] gi|75703820|gb|ABA23496.1| TPR repeat protein [Anabaena variabilis ATCC 29413] Length = 196 Score = 40.7 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174 E VY + A AE +Y A E E + T + +Y++ GD + A Sbjct: 56 KEAFVYYRDGMSAQAEGEYAEALEYYEEALTLEEDTNDRGYILYNMGLIYASNGDHDKAL 115 Query: 175 RYATKALDISPDAPWV--TEAVVQQYVLA-----KEWSRAITFLNQK 214 +A++++P P AV+ Y + +Q Sbjct: 116 ELYHQAIELNPRLPQALNNIAVIYHYKGEKAKEDGDHDGGEALFDQA 162 >gi|297172356|gb|ADI23331.1| hypothetical protein [uncultured Oceanospirillales bacterium HF0770_27O18] Length = 149 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 40/93 (43%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ G+ +A RY +AL ++P++ W+ + + + A F + + A + + Sbjct: 51 QARAQGETGAASRYLERALTMAPNSSWLYRELALLRLEEGDGHAAEGFAQRALRLAPDND 110 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKL 255 RA L + A++GD + + L Sbjct: 111 DYRAELWELVAAARAEQGDRSGADEARARAQAL 143 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 4/118 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A K + + + L + A A+ + A LE L + + L Sbjct: 25 AEKAEPVTADTELKGSPAMALLSRAEQARAQGETGAASRYLERALTMAPNSSWLYRELAL 84 Query: 163 ESCRIGDLNSAQRYATKALDISPDA----PWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 GD ++A+ +A +AL ++PD + E V + S A + + Sbjct: 85 LRLEEGDGHAAEGFAQRALRLAPDNDDYRAELWELVAAARAEQGDRSGADEARARAQA 142 >gi|308271574|emb|CBX28182.1| hypothetical protein N47_G35060 [uncultured Desulfobacterium sp.] Length = 490 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 8/106 (7%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLSENTVGKLKRALRLEEIN 321 A L + A +K + NP ++ +Y K + Sbjct: 324 ALVLSESGDRSDAIAYFKKALEENPFDPDILRDLGKVYF--QDGQYPEAQKTLEGAVSLA 381 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQ 366 + E+L+ + +I E G + A + + P K LL + Sbjct: 382 PDDPETLLFLGRIKAETGKFNDARKLFLTITEKYPYYKRALYLLGE 427 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 8/83 (9%) Query: 133 ERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + A + L+ P + L + G AQ+ A+ ++PD P Sbjct: 330 SGDRSDAIAYFKKALEENPFDPDI----LRDLGKVYFQDGQYPEAQKTLEGAVSLAPDDP 385 Query: 189 WVTEAVVQQYVLAKEWSRAITFL 211 + + +++ A Sbjct: 386 ETLLFLGRIKAETGKFNDARKLF 408 >gi|295689041|ref|YP_003592734.1| tetratricopeptide repeat-containing protein [Caulobacter segnis ATCC 21756] gi|295430944|gb|ADG10116.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter segnis ATCC 21756] Length = 577 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 62/197 (31%), Gaps = 10/197 (5%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A A A +P+ A+ +W ++ L+ R Sbjct: 356 GDKAKALEVARAAAAAAPNNRDAQVALADLLRSGGQWDESVAVLDPLIAGEAASPDWR-- 413 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVILEKI 286 LL R++ G + D +LKL + + I + + ++A +++K Sbjct: 414 LLYLRAVSLEQGGRWPEAERDLQAALKLNPDEPELLNFLGYTWIDRGEHLKEALAMVQKA 473 Query: 287 WKVNPHP-----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 P + Y L T +++ E+ + + +G Sbjct: 474 VDARPQSGAMLDSLGWAYYRLGDYKTA--VEKLEAAAEMEPGDPDVNDHLGDAYWRVGRK 531 Query: 342 DQAHAKAMLAMKIAPRK 358 +A + + + P + Sbjct: 532 TEATFQWRRVLSLEPTE 548 >gi|303315935|ref|XP_003067972.1| TPR Domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107648|gb|EER25827.1| TPR Domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320032086|gb|EFW14042.1| translation repressor/antiviral protein Ski3 [Coccidioides posadasii str. Silveira] Length = 1412 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 65/231 (28%), Gaps = 29/231 (12%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + + A + E +L+ T + L D + A KAL P Sbjct: 424 TYQSPKNHPEAKQIFEEILKRNQTSTKCLLGLGLIFEEDQDYDQAVALLEKALQRDPKNA 483 Query: 189 WVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 V + E +A L + ++ +A++L + Sbjct: 484 RVRCELFWCRAHCGELQQAARGLEETLTMIQCEQSQYRDLKAVILYRIGQCQWELDPSPT 543 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + D + SI +++ A + S + Y Sbjct: 544 ARKDRNGAYAKFLGSIQSNMNYAPAYTS----------------------LGIFYADYKK 581 Query: 305 ENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + KR + E++ E+ +++ G D A A + Sbjct: 582 D--QKRAKRCFHKAIELSSSETEAAERLARDFANQGDWDLVEAIAQRVVDS 630 >gi|182412343|ref|YP_001817409.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177839557|gb|ACB73809.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 478 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 60/197 (30%), Gaps = 8/197 (4%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 ++ V L A E + A LE L + + GDL A+R+ Sbjct: 254 HDPYVLLTAASTAWVEERAERAFALLERALTLAPGDARLHRQMAKMLSARGDLAGARRHL 313 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 + + ++P + ++ + L + N + + A Sbjct: 314 EEGVALAPTNDSIQLDLIGILHQLND----TAALQRVVAAGLAANPESPAMHFEAGMAAA 369 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKVNPHPE 294 G + + + + + I A+I A + +L+ + P P Sbjct: 370 AAGRLEEAAQHLEFTWRTSPDQIAAAIELANVYFRAGRGDDGVALLQDAITKFSHKPAPL 429 Query: 295 IANIYTH-LLSENTVGK 310 + + H + + + + Sbjct: 430 LLVLIRHGIETGDPRTR 446 >gi|148668309|gb|EDL00639.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_c [Mus musculus] Length = 767 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 485 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 540 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 541 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 593 >gi|119484402|ref|ZP_01619019.1| TPR repeat protein [Lyngbya sp. PCC 8106] gi|119457876|gb|EAW38999.1| TPR repeat protein [Lyngbya sp. PCC 8106] Length = 566 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 77/208 (37%), Gaps = 11/208 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + +A + L ++PD+P V + Q + +++ AI ++ + + Sbjct: 281 ALKSQWPEAALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNFPE 340 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + R + + G + +L++ + + C ++L ++ +A + Sbjct: 341 ----AWLGRGIALCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQLDRYEEAVIAY 396 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIAL 336 +K+ + + L + KL+R ++ + ++ E+ + + + Sbjct: 397 DKVLLLTSENQTLATQAGLQRGEALEKLERYSEAIVAYKKVVRLRPDNFEAWIKLGQACE 456 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 ++ A A++I P L+ Sbjct: 457 QVQQYSSAFEAYSQAIQIWPDNYTVRLM 484 >gi|94272126|ref|ZP_01292074.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93450229|gb|EAT01514.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 216 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 13/135 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L E + A + A + + + P +RE A+ L + D +A + L Sbjct: 24 LLEEARAAYRLGDHEEAWRAYQQALEKSPRSREAAM-GLATVAQSRNDPLTALHLYQQIL 82 Query: 182 DISPDAPWVTEAVVQQ---YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P + +V A LN+ + A L + +A Sbjct: 83 ERDPGDRQAQQGLVSLAPALAAAGHGEVLRDLLNR--------HPQAAPLHLTMGNLHAS 134 Query: 239 KGDMIASYHDAIESL 253 +G+ + +L Sbjct: 135 QGEWTRARRAYQNAL 149 >gi|58037339|ref|NP_082927.1| transmembrane and TPR repeat-containing protein 4 [Mus musculus] gi|81913085|sp|Q8BG19|TMTC4_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 4 gi|26329567|dbj|BAC28522.1| unnamed protein product [Mus musculus] gi|26335635|dbj|BAC31518.1| unnamed protein product [Mus musculus] gi|26336430|dbj|BAC31900.1| unnamed protein product [Mus musculus] gi|26337207|dbj|BAC32288.1| unnamed protein product [Mus musculus] gi|26340478|dbj|BAC33902.1| unnamed protein product [Mus musculus] Length = 741 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 459 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 514 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 515 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 567 >gi|134301125|ref|YP_001114621.1| TPR repeat-containing protein [Desulfotomaculum reducens MI-1] gi|134053825|gb|ABO51796.1| TPR repeat-containing protein [Desulfotomaculum reducens MI-1] Length = 193 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 55/162 (33%), Gaps = 16/162 (9%) Query: 88 LYTGLMSIA---------AHNIPLARKMHSYVSQQHT--FHNEYLVYLLEVQI--ALAER 134 L GL++ + A + + N LL + Sbjct: 28 LSIGLIASSIAWTGIGDITGQTDTATTLEERIQNLELQAKKNPEDKGLLAALASYYIQAG 87 Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 + ++A E E ++++ + +L G L++A++ AL++ P V Sbjct: 88 KVDLARESYEKLVKLDPKDISSRQNLALLYYTQGKLDAAEQELKNALEVEPSNAEVNYQY 147 Query: 195 VQQYVLAKEWSRAITFLNQ---KKKNAKEWNRNRAILLIARS 233 + +++ AI+ + + +K + R + ++ Sbjct: 148 AKLLGEKRDYKLAISHMEKFLASQKEGPRADEARKFIEAWKA 189 >gi|324013563|gb|EGB82782.1| tetratricopeptide repeat protein [Escherichia coli MS 60-1] Length = 1093 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|323489695|ref|ZP_08094922.1| hypothetical protein GPDM_10120 [Planococcus donghaensis MPA1U2] gi|323396826|gb|EGA89645.1| hypothetical protein GPDM_10120 [Planococcus donghaensis MPA1U2] Length = 417 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 54/169 (31%), Gaps = 14/169 (8%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNSAQRY 176 YLL+ Q Y A++ + L + ++G + Sbjct: 239 AYLLKAQSYNMAEDYQPAYQAISEGLARDEFDKELYLFAG-----KLALKLGKAEEGVEH 293 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 +A+ + P+ +V + ++ + ++ +W ++ A Sbjct: 294 LRQAIALDPEYMEAIYTLVSYFHAQEQDEEVLELAEMVVESGDDWAGLYPMVAEAYERTE 353 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 K + Y A S K + + LI + K+ +A I+++ Sbjct: 354 NYKQATVY-YDKAYSSFKDDADFLKKYTL---FLIEEGKRERALEIIKE 398 >gi|315505218|ref|YP_004084105.1| tetratricopeptide tpr_1 repeat-containing protein [Micromonospora sp. L5] gi|315411837|gb|ADU09954.1| Tetratricopeptide TPR_1 repeat-containing protein [Micromonospora sp. L5] Length = 567 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 85/244 (34%), Gaps = 23/244 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQ----------QYVLAKEWSRAITFLNQKKKN- 217 D A+ + AL ++ + ++ A RA+ ++ Sbjct: 238 DPALARHWLEVALRLAAELADPRRRLLSTVFYEQGLALLDSRAGRPDRALRLVDDGLTRL 297 Query: 218 -----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 E ++ A L R+ + GD + D + ++ + A + Sbjct: 298 TAALGPGERPQDLARLRHNRAQVHLALGDPARALADLDTVIAHDPDNCEYYVDRAALHRA 357 Query: 273 QNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLKRA----LRLEEINKESVES 327 + R A + ++ PH PE Y + + G+ +RA R+ I +++ Sbjct: 358 AGRTRAAIRDYDAAIRLGPHLPE--AYYNRAVLQQERGRPERARADLERVLAIEPGHLDA 415 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALH 387 + + + +E G++D A A A + AP++ L + A + AL+ Sbjct: 416 RIALVNLHVERGALDAAEAGARAGLAGAPQEPALLCTLGLVLAERGRPAEADELLTRALN 475 Query: 388 AMPD 391 P+ Sbjct: 476 GDPE 479 >gi|188997419|ref|YP_001931670.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932486|gb|ACD67116.1| TPR repeat-containing protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 105 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 1/101 (0%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + + + + + P +Y L E + G A Y K L + D + Q Sbjct: 2 DRIEQLKKALEKDPN-NPLGLYGLALELYKQGLYEDAIVYFKKYLSLYEDQGAAYRTLAQ 60 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 Y+ + +AI + + A+++N + + +E Sbjct: 61 CYINIGDIEQAIETYERGIEKARKYNHPTMVEEFKQEIERL 101 >gi|167581033|ref|ZP_02373907.1| TPR domain protein [Burkholderia thailandensis TXDOH] Length = 614 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 68/234 (29%), Gaps = 16/234 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 L + + + L + A+ +++ A + + L + + Sbjct: 83 GRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAFQRALALAPGDASIHNN 142 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L +G A +AL++ P + + A+ Sbjct: 143 LGNALNALGRHGDALAAFRRALELRPGHAGAHNNLGMALAALGDTEEAVAHFRAALAAEP 202 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + +L+ G + +L L +A A +L + + R A Sbjct: 203 RF--VAAHFNLGNALDAV--GRHAQALSAFESALALQPRFPLALFGLANALAALGRHRDA 258 Query: 280 EVILEKIWKVNP------------HPEIANIYTHLLSENTVGKLKRALRLEEIN 321 E+ ++P H + L + + +L + L +++ Sbjct: 259 LPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSHALAQMH 312 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 11/199 (5%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R G L+ A+ AL +P A + + E Sbjct: 11 AHRAGRLDDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAV----ELRP 66 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 N A L + G + + +L L +A + +Q + A Sbjct: 67 NDAALQLNLGNAFKALGRLDDAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDAF 126 Query: 284 EKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 ++ + P H + N L L R E+ + + + Sbjct: 127 QRALALAPGDASIHNNLGNALNALGRHG--DALAAFRRALELRPGHAGAHNNLGMALAAL 184 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G ++A A A+ PR Sbjct: 185 GDTEEAVAHFRAALAAEPR 203 >gi|170100523|ref|XP_001881479.1| predicted protein [Laccaria bicolor S238N-H82] gi|164643438|gb|EDR07690.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1213 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 65/201 (32%), Gaps = 34/201 (16%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEY-------LVYLLEVQIAL--AERQYNIAHEKL-EM 145 A++++ A +H + L L+ + A + A E Sbjct: 926 ASNDLDEAISLHQEALLLRPAPHPERSSSLNNLANALQSRFEQQGASNDLDKAISLHQEA 985 Query: 146 MLQIPATR----------EFAVYSLYFESCRIGDLNSAQRYATKALDISP---------- 185 +L PA A+ + + DL+ A +AL + P Sbjct: 986 LLLQPAPHPDRSSSLNNLAAALQGHFEQRGASNDLDEAISLHREALLLQPAPHPCRSHSL 1045 Query: 186 -DAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAKEWNRNRAILLIARSLEN-ADKGD 241 + ++ +Q + + AI+ + + A +R+ ++ +A +L++ ++ Sbjct: 1046 NNLANALQSRFEQRGASNDLDEAISLHREALLLRPAPHPDRSSSLNNLADALQSRFEQRG 1105 Query: 242 MIASYHDAIESLKLCDNSIMA 262 +AI + A Sbjct: 1106 ASNDLDEAISLHREALLLRPA 1126 >gi|147919338|ref|YP_686926.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon RC-I] gi|110622322|emb|CAJ37600.1| hypothetical protein RCIX2537 [uncultured methanogenic archaeon RC-I] Length = 310 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 15/201 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G+ A K ++ PD + + + A+ ++ + +++ Sbjct: 34 RDMGNYGRAVEEFRKMSELEPDDAEAHRLLGEALYRNGAYEEALKEFDKAIQLDEDYTEA 93 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 R +S+ A G S + + + AK + + K +A + Sbjct: 94 R----YWKSIVYAKMGREKESSQEYRTAYDSDPEDVELMYEWAKEVAAAGKYYEAIRVYR 149 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRAL------RLEEIN-KESVESLVIVSKIALE 337 I HPE L + + + + L + ++ ++ + L Sbjct: 150 DILIA--HPEYYEARVDL--GSALIRAGKENEGYEEYALARASDPDNPMIPFMIGEFLLS 205 Query: 338 MGSIDQAHAKAMLAMKIAPRK 358 M +D+A A +++P Sbjct: 206 MDRLDEALDAFKSAQELSPNA 226 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 73/264 (27%), Gaps = 49/264 (18%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATKALDISPDAPWVT- 191 Y A E+ M ++ A L E+ R G A + KA+ + D Sbjct: 37 GNYGRAVEEFRKMSELEPDDAEAHR-LLGEALYRNGAYEEALKEFDKAIQLDEDYTEARY 95 Query: 192 -----EAVVQQY----------------------------VLAKEWSRAITFLNQKKKNA 218 A + + A ++ AI Sbjct: 96 WKSIVYAKMGREKESSQEYRTAYDSDPEDVELMYEWAKEVAAAGKYYEAIRVYRDILIAH 155 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 E+ R L A G Y + + ++ M + L+S ++ + Sbjct: 156 PEYYEARVDLGSA----LIRAGKENEGYEEYALARASDPDNPMIPFMIGEFLLSMDRLDE 211 Query: 279 AEVILEKIWKVNP-HPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVS 332 A + +++P P+ +Y + + + VE + Sbjct: 212 ALDAFKSAQELSPNAPD---VYRRIGDVLHRKGRVDEAISEYKKAIRQKPHDVELHAGLG 268 Query: 333 KIALEMGSIDQAHAKAMLAMKIAP 356 + LE G D A + K+ P Sbjct: 269 DLYLEKGMKDDAVREYRRVKKLEP 292 >gi|148263389|ref|YP_001230095.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4] gi|146396889|gb|ABQ25522.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens Rf4] Length = 638 Score = 40.7 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 22/182 (12%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++ + W WS K ++R + +L ++ Sbjct: 460 AAGMARNTIWADSVTF--------WSD---------VARKSPKKSRVHTNLGIAL--FEQ 500 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G A + +++L + A I KSL+ Q +A L ++NPH + +++ Sbjct: 501 GKTGAGIEEFRTAIRLKPSDTNARINLGKSLLIQKMYDEAASELLTAARLNPHDPVPHVF 560 Query: 300 THLLSENTVGKL-KRALRLEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L+ E R L I S ++ + + ++ + I A + A+++ P Sbjct: 561 LGLVYEGKGELSNARWAYLAAIKISPASPDAHIRLGELYAKEEKIQDAKREYEAALRLYP 620 Query: 357 RK 358 + Sbjct: 621 DE 622 >gi|332702922|ref|ZP_08423010.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332553071|gb|EGJ50115.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 474 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 60/144 (41%), Gaps = 15/144 (10%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ + + +G+ + E+L+ +S A + +L + + A + Sbjct: 152 LLEKGKSHLLRGNTSMAMTLGEEALRHKPDSPSALMLVGDALRAMERHEDALS----AYA 207 Query: 289 VNPHPE---------IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 H + Y+ L ++V +L+ RL+ ++ +VE V + + L++G Sbjct: 208 EAHHSAELYLEPIKRLIQTYSEL--GDSVKELEYLERLDRLSPLNVERKVQIGGLKLKLG 265 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLL 363 ++ A + A+K+ + + L+ Sbjct: 266 NLSAADREFGKAVKLTTDQAMSLI 289 >gi|297172794|gb|ADI23758.1| hypothetical protein [uncultured Oceanospirillales bacterium HF4000_43P14] Length = 149 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 40/93 (43%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 ++ G+ +A RY +AL ++P++ W+ + + + A F + + A + + Sbjct: 51 QARAQGETGAASRYLERALTMAPNSSWLYRELALLRLEEGDGHAAEGFAQRALRLAPDND 110 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKL 255 RA L + A++GD + + L Sbjct: 111 DYRAELWELVAAARAEQGDRSGADEARARAQAL 143 Score = 38.4 bits (88), Expect = 3.2, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 4/118 (3%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A K + + + L + A A+ + A LE L + + L Sbjct: 25 AEKAEPVTADTELQGSPAMALLSRAEQARAQGETGAASRYLERALTMAPNSSWLYRELAL 84 Query: 163 ESCRIGDLNSAQRYATKALDISPDA----PWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 GD ++A+ +A +AL ++PD + E V + S A + + Sbjct: 85 LRLEEGDGHAAEGFAQRALRLAPDNDDYRAELWELVAAARAEQGDRSGADEARARAQA 142 >gi|289643933|ref|ZP_06476036.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca glomerata] gi|289506262|gb|EFD27258.1| Tetratricopeptide domain protein [Frankia symbiont of Datisca glomerata] Length = 216 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 2/116 (1%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y G+ + N A ++ ++ L + QY A E Sbjct: 94 YDWYTRGVALLDRGNANAAVQLLAHAVAAEPGSRSVREAL--ARAQFDAGQYGAARESFA 151 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 ++ T ++A + L + R GDL +A + A+ + PD +A+ Sbjct: 152 WIVAHDPTDDYAQFGLGMAARRTGDLRAAVEHLALAVAMRPDLGHYGQALRGVRAA 207 >gi|283788209|ref|YP_003368074.1| TPR repeat lipoprotein [Citrobacter rodentium ICC168] gi|282951663|emb|CBG91363.1| TPR repeat lipoprotein [Citrobacter rodentium ICC168] Length = 294 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 19/218 (8%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + + + ++S G A+ ++AL I PD P V + A Sbjct: 54 RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIM 261 + A + + +N + R + G + D + + N Sbjct: 112 FDAAYEAFDSVLELDPTYN----YAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 167 Query: 262 ASICAAKSLISQNKKRKA-----EVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKR-A 314 + A+ + + + ++A + ++ W N I Y +SE+T+ +LK A Sbjct: 168 LWLYLAEQKLDEKQAKEALRQRFDKSDKEQWGWN----IVEFYLGDISESTLMERLKADA 223 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + E+ + K L +G +D A A LA+ Sbjct: 224 TDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAV 261 >gi|282162848|ref|YP_003355233.1| hypothetical protein MCP_0178 [Methanocella paludicola SANAE] gi|282155162|dbj|BAI60250.1| hypothetical protein [Methanocella paludicola SANAE] Length = 373 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 98/312 (31%), Gaps = 20/312 (6%) Query: 83 KGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH-------------NEYLVYLLEVQI 129 + + GL+ P A K +Y+ ++ H ++ + Sbjct: 18 RALGLITKGLLVDGRAEEPGAEKARAYLGRRDYAHAAEELKKAISSHPDDPEAHYDLGVA 77 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + + A +++ A Y+L + G L+ A R +A + PD Sbjct: 78 LVRAGKLDDAMGSFVAAIKLDPGFAEAHYNLGVVFAKKGMLDDAIREYNRAARLRPDYAK 137 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + A + L R +A+ R +E A + + I S + Sbjct: 138 AHFNLALALTNKGLHDHAKSELMA----VGGIRRRQALEHYNRGVELAGRDEAILSMAEF 193 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI--ANIYTHLLSEN 306 E+L+L A L +A + +NP PE+ E+ Sbjct: 194 REALRLDPGLYQAYNNIGAMLAHNGMIDRAVAEYGRGLSINPDDPELHFNMALALSARED 253 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 LK ++ E+ + K + +D A ++ A+ + P + L Sbjct: 254 HGAALKELGEAVRLSPNFAEAHYSLGKTLAALDKLDWAVSEYKEALSLDPGLSMAYLDMG 313 Query: 367 IEQANSHNTDKI 378 + S + + Sbjct: 314 VALEESGDLEAA 325 >gi|229093466|ref|ZP_04224569.1| TPR domain protein [Bacillus cereus Rock3-42] gi|228689937|gb|EEL43741.1| TPR domain protein [Bacillus cereus Rock3-42] Length = 219 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|297201942|ref|ZP_06919339.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148002|gb|EDY56715.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 777 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 59/185 (31%), Gaps = 20/185 (10%) Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE--------NADKGDMI 243 A++ K W ++ ++ +E+ A A + G Sbjct: 230 TAILHFTGRHKPWQGGEAGYSRAEERWREFELTDAEFQAAYMEQQGSLHHDLIVHYGTPH 289 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI-LEKIWKVNPHPEIANIYTHL 302 + +E+ + + A+ ++ I L++ W PH + + L Sbjct: 290 VARTGDVEAARK----VAAAHISSGDYQDAVDVLSGVRIPLDEAW---PHEVLGHA---L 339 Query: 303 LSENTVGKLKRALRLEEINKESVESLVI-VSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 +S + + K L L + ++++A G +A A + + P Sbjct: 340 MSVSRYDEAKTQLLLASAAPNRAATAYARLAQMAWVHGDNTEALRHATAGLAVDPTHRSS 399 Query: 362 LLLAQ 366 L AQ Sbjct: 400 RLWAQ 404 >gi|218690664|ref|YP_002398876.1| hypothetical protein ECED1_2976 [Escherichia coli ED1a] gi|218428228|emb|CAR09144.2| conserved hypothetical protein [Escherichia coli ED1a] Length = 1093 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|222110041|ref|YP_002552305.1| tpr repeat-containing protein [Acidovorax ebreus TPSY] gi|221729485|gb|ACM32305.1| TPR repeat-containing protein [Acidovorax ebreus TPSY] Length = 574 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 63/219 (28%), Gaps = 14/219 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHN-EYLVYLLEVQ---IALA--ERQYNIA 139 +AL + + +A K Y + E LL Q AL + + A Sbjct: 320 RALTQAYLM----HAQVAEKRGDYAGAEGWLSRIEDAAELLTAQSRRAALLVRQGKLEEA 375 Query: 140 HEKLEMM-LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + P + + A KA+ ++P + Sbjct: 376 RALIRAVPASTPDQERLKLQAEAQLLREAKQYAQAYTVLGKAVALAPADNDLAYDQAMLA 435 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A L +++ L + + + + +++L+ N Sbjct: 436 EKAGRLDDMERLLRAIIARQPDYHHALNALGFSLA---ERGVRLEEAKALIVKALEFAPN 492 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 + +++A IL++ ++ P EIA Sbjct: 493 DPFITDSLGWVEFRLGNRQEALTILKRAYETQPDAEIAA 531 >gi|206559756|ref|YP_002230520.1| putative cellulose biosynthesis protein [Burkholderia cenocepacia J2315] gi|198035797|emb|CAR51688.1| putative cellulose biosynthesis protein [Burkholderia cenocepacia J2315] Length = 1245 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 52/306 (16%) Query: 72 LFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLAR-----------------KMHSYVS 111 L R D Y A GL ++A ++ A + Sbjct: 223 LDRQRDARRRLERDPDYIAQQRGLQALARGDLAAADPLLARAARARADDADALGGLGLLR 282 Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + H+E +L + A K + + + + + + + E+ G Sbjct: 283 LREGRHDEA--RVLFARAATRATDQ---RGKWQSLART--AQFWGLLAQGREAASAGRPK 335 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A+R A AL + PD P + + ++W++A L LL A Sbjct: 336 EAERAARAALAMQPDNPDAKLQLADALLAQRDWAQAEPLLRG--------------LLAA 381 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 RS + D Y + + ++ A + ++ R+A L N Sbjct: 382 RSPSLSAVRDTATLYENTGRADRIGPLLD-----ALQGRVTGADDRRALDGLRSDLLANE 436 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +A+ +R ++ + ++++ +MG Sbjct: 437 ARALAD------KGARGPAAQRYEAAVRAAPDAPWTRFALARLYRDMGLPQLGRTVMDDG 490 Query: 352 MKIAPR 357 + Sbjct: 491 LAQRDT 496 >gi|254414647|ref|ZP_05028412.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] gi|196178495|gb|EDX73494.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes PCC 7420] Length = 234 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 4/96 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q+ E+S AI L+Q K+ AI R L G + D +L+L Sbjct: 50 QRQAKQGEYSSAIALLSQAIKHHPT----HAIDYNNRGLIYFQMGQRQKALDDYNRALQL 105 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A + + KA EK +NP Sbjct: 106 NPELDSAYNNRGNYYAAMGQLAKALADYEKALDLNP 141 >gi|189197921|ref|XP_001935298.1| UDP-N-acetylglucosaminyltransferase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981246|gb|EDU47872.1| UDP-N-acetylglucosaminyltransferase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1529 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 5/130 (3%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL +A A Y A + + +L + A+ +L + A+ Y +A+ + Sbjct: 414 LLGGCLAYALGDYQKAQDWYKHILTLDKDHVEAISNLAATMLALQQKREAENYWRRAVKL 473 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA-DKGDM 242 P E ++ ++ A+ + + ++ K R A+ RSLE ++ + Sbjct: 474 RPSYFEAVEHLIGLLCSDQKSREAVQVIEEVERQLKFVKRADAM----RSLEIESERSNS 529 Query: 243 IASYHDAIES 252 S E+ Sbjct: 530 DLSESSVSEA 539 >gi|30264465|ref|NP_846842.1| TPR domain-containing protein [Bacillus anthracis str. Ames] gi|47529923|ref|YP_021272.1| TPR domain-containing protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49187286|ref|YP_030538.1| TPR domain-containing protein [Bacillus anthracis str. Sterne] gi|49478625|ref|YP_038445.1| TPR repeat-containing protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|165872749|ref|ZP_02217377.1| TPR domain protein [Bacillus anthracis str. A0488] gi|167636509|ref|ZP_02394806.1| TPR domain protein [Bacillus anthracis str. A0442] gi|167638676|ref|ZP_02396952.1| TPR domain protein [Bacillus anthracis str. A0193] gi|170689640|ref|ZP_02880822.1| TPR domain protein [Bacillus anthracis str. A0465] gi|170709400|ref|ZP_02899811.1| TPR domain protein [Bacillus anthracis str. A0389] gi|177653264|ref|ZP_02935516.1| TPR domain protein [Bacillus anthracis str. A0174] gi|190566840|ref|ZP_03019756.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I] gi|196039205|ref|ZP_03106511.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99] gi|196044928|ref|ZP_03112162.1| TPR domain protein [Bacillus cereus 03BB108] gi|218905590|ref|YP_002453424.1| TPR domain protein [Bacillus cereus AH820] gi|225866377|ref|YP_002751755.1| TPR domain protein [Bacillus cereus 03BB102] gi|227817174|ref|YP_002817183.1| TPR domain protein [Bacillus anthracis str. CDC 684] gi|228917029|ref|ZP_04080589.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929440|ref|ZP_04092461.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935716|ref|ZP_04098529.1| TPR domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948109|ref|ZP_04110393.1| TPR domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123936|ref|ZP_04253128.1| TPR domain protein [Bacillus cereus 95/8201] gi|229602202|ref|YP_002868682.1| TPR domain protein [Bacillus anthracis str. A0248] gi|254684151|ref|ZP_05148011.1| TPR domain protein [Bacillus anthracis str. CNEVA-9066] gi|254724678|ref|ZP_05186461.1| TPR domain protein [Bacillus anthracis str. A1055] gi|254736498|ref|ZP_05194204.1| TPR domain protein [Bacillus anthracis str. Western North America USA6153] gi|254741536|ref|ZP_05199223.1| TPR domain protein [Bacillus anthracis str. Kruger B] gi|254751365|ref|ZP_05203402.1| TPR domain protein [Bacillus anthracis str. Vollum] gi|254757697|ref|ZP_05209724.1| TPR domain protein [Bacillus anthracis str. Australia 94] gi|300119217|ref|ZP_07056914.1| TPR domain protein [Bacillus cereus SJ1] gi|301055903|ref|YP_003794114.1| tetratricopeptide repeat family protein [Bacillus anthracis CI] gi|30259123|gb|AAP28328.1| tetratricopeptide repeat protein [Bacillus anthracis str. Ames] gi|47505071|gb|AAT33747.1| TPR domain protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181213|gb|AAT56589.1| TPR domain protein [Bacillus anthracis str. Sterne] gi|49330181|gb|AAT60827.1| TPR domain protein (tetratricopeptide repeat family protein) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711525|gb|EDR17074.1| TPR domain protein [Bacillus anthracis str. A0488] gi|167513524|gb|EDR88894.1| TPR domain protein [Bacillus anthracis str. A0193] gi|167528102|gb|EDR90899.1| TPR domain protein [Bacillus anthracis str. A0442] gi|170125699|gb|EDS94615.1| TPR domain protein [Bacillus anthracis str. A0389] gi|170666410|gb|EDT17191.1| TPR domain protein [Bacillus anthracis str. A0465] gi|172081546|gb|EDT66618.1| TPR domain protein [Bacillus anthracis str. A0174] gi|190561831|gb|EDV15800.1| TPR domain protein [Bacillus anthracis Tsiankovskii-I] gi|196024416|gb|EDX63089.1| TPR domain protein [Bacillus cereus 03BB108] gi|196029832|gb|EDX68433.1| tetratricopeptide repeat protein [Bacillus cereus NVH0597-99] gi|218539110|gb|ACK91508.1| TPR domain protein [Bacillus cereus AH820] gi|225787224|gb|ACO27441.1| tetratricopeptide repeat protein [Bacillus cereus 03BB102] gi|227004598|gb|ACP14341.1| tetratricopeptide repeat protein [Bacillus anthracis str. CDC 684] gi|228659238|gb|EEL14886.1| TPR domain protein [Bacillus cereus 95/8201] gi|228811467|gb|EEM57804.1| TPR domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823954|gb|EEM69773.1| TPR domain protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830228|gb|EEM75844.1| TPR domain protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842636|gb|EEM87724.1| TPR domain protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266610|gb|ACQ48247.1| TPR domain protein [Bacillus anthracis str. A0248] gi|298723437|gb|EFI64182.1| TPR domain protein [Bacillus cereus SJ1] gi|300378072|gb|ADK06976.1| tetratricopeptide repeat family protein [Bacillus cereus biovar anthracis str. CI] Length = 219 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|85059391|ref|YP_455093.1| hypothetical protein SG1413 [Sodalis glossinidius str. 'morsitans'] gi|84779911|dbj|BAE74688.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 389 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 1/87 (1%) Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHD 248 ++Q + EWS+AI + K KE +R A +L+ DM + Sbjct: 143 ALSLLLQIHQATSEWSKAIDVAEKLVKLGKEQHRVEIAHFYCELALQVMGSDDMDRAVAL 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNK 275 + NS SI A+ ++Q Sbjct: 203 LKKGAAADKNSARVSIMRARIYMAQQD 229 >gi|110642710|ref|YP_670440.1| hypothetical protein ECP_2550 [Escherichia coli 536] gi|191172596|ref|ZP_03034135.1| tetratricopeptide repeat protein [Escherichia coli F11] gi|300974184|ref|ZP_07172502.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] gi|110344302|gb|ABG70539.1| hypothetical protein YphG [Escherichia coli 536] gi|190907069|gb|EDV66669.1| tetratricopeptide repeat protein [Escherichia coli F11] gi|300308923|gb|EFJ63443.1| tetratricopeptide repeat protein [Escherichia coli MS 200-1] Length = 1093 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDTGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|315615810|gb|EFU96442.1| tetratricopeptide repeat family protein [Escherichia coli 3431] Length = 1088 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 3/115 (2%) Query: 106 MHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 + + H+ + L+ + QY A E + ++ Y L Sbjct: 513 ATQALKRAHSLNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 572 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 573 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 627 >gi|309792006|ref|ZP_07686484.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] gi|308226000|gb|EFO79750.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] Length = 525 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 79/246 (32%), Gaps = 17/246 (6%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 +A + Q ++YL + + A + +Q A Y+ Sbjct: 55 ALIAAYVDGEEQAQIYERERAIIYLYIGNALAFQEDWEAALREYLEAVQTDQQLAEAHYN 114 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L G L+ A + L+ +P+ A+ + +++ +A Sbjct: 115 LGVAFAARGQLDRAVAAFRETLEHNPNLYEAHFAL--GRCYQQIDDAGRAYIHYN--SAC 170 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI-MASICAAKSLISQNKKRK 278 A L L + + G + E+L++ I S A +LIS++++ Sbjct: 171 NARPQAAEPLYYMGLMHQEHGAHELAQKCFAEALRVEPTFISPDSSAAEDALISRSEEEV 230 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A+ W ++ E ++ RA L + + + ++ + Sbjct: 231 AQ------WYYR----LSQALKQQNYEEDAERIYRA--LLQWRAQEYPARYLLGNLLARQ 278 Query: 339 GSIDQA 344 D+A Sbjct: 279 RRWDEA 284 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 53/145 (36%), Gaps = 7/145 (4%) Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 A+ + R RAI+ + A + D A+ + +E+++ A + ++ + Sbjct: 67 AQIYERERAIIYLYIGNALAFQEDWEAALREYLEAVQTDQQLAEAHYNLGVAFAARGQLD 126 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 +A + + NP H + Y + ++ ++ E L + Sbjct: 127 RAVAAFRETLEHNPNLYEAHFALGRCYQQI--DDAGRAYIHYNSACNARPQAAEPLYYMG 184 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 + E G+ + A A+++ P Sbjct: 185 LMHQEHGAHELAQKCFAEALRVEPT 209 >gi|256021766|ref|ZP_05435631.1| hypothetical protein E4_00210 [Escherichia sp. 4_1_40B] gi|301648308|ref|ZP_07248048.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|307139185|ref|ZP_07498541.1| hypothetical protein EcolH7_13803 [Escherichia coli H736] gi|331643171|ref|ZP_08344306.1| putative tetratricopeptide repeat protein [Escherichia coli H736] gi|301073584|gb|EFK88390.1| tetratricopeptide repeat protein [Escherichia coli MS 146-1] gi|331039969|gb|EGI12189.1| putative tetratricopeptide repeat protein [Escherichia coli H736] Length = 1093 Score = 40.7 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 3/115 (2%) Query: 106 MHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 + + H+ + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHSLNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 632 >gi|304396071|ref|ZP_07377953.1| tetratricopeptide repeat protein [Pantoea sp. aB] gi|304356440|gb|EFM20805.1| tetratricopeptide repeat protein [Pantoea sp. aB] Length = 389 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 41/194 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI----ALAERQYNIAHEKLEMMLQIPATR 153 + A ++H + + + E LL VQ +A Y+ A + + + T Sbjct: 83 GEVDRAIRIHQALMESASLSYEQ--RLLAVQQLGRDYMAAGFYDRAEDMFKQLT--DETD 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 R+G + ++ + +W +AI + Sbjct: 139 F-----------RVG---------------------ALQQLLLIHQATSDWQQAIEVAER 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K K+ + A +L+ D+ + + NS SI + + Sbjct: 167 LVKLGKDKQKGEIAHFYCELALQAMSSDDLDRAMSLLKKGEAADRNSARISIMMGRIFME 226 Query: 273 QNKKRKAEVILEKI 286 + KA L+++ Sbjct: 227 KEDFTKAVGHLQRV 240 >gi|294507873|ref|YP_003571931.1| Conserved hypothetical protein, containing tetratricopeptide repeat domain [Salinibacter ruber M8] gi|294344201|emb|CBH24979.1| Conserved hypothetical protein, containing tetratricopeptide repeat domain [Salinibacter ruber M8] Length = 639 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 84/241 (34%), Gaps = 15/241 (6%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC---RIGDLNSAQRYATKALDIS 184 Q + ++Y A +E + P T V L ++ + G+ +A +AL ++ Sbjct: 98 QAYESLKRYRDALRLVEERIGSPPT----VSRLAEKARLQYQKGEGEAADATWDRALALA 153 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P+ P V +++ +AI L + + + + R L L+ G A Sbjct: 154 PNEPQTYRTVYNTLAELRQFRKAIAVLQEGRAALDQPDAFRTELAHLYGLD----GQFEA 209 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE-VILEKIWKVNPHPE---IANIYT 300 + + + L N + ++ + Q + A +L++ + NP E + Sbjct: 210 AMQEYVAFLAEAPNRLNYVRSRLRTFVEQGQGIAASIQVLQQTVQENPLNEAYRTLLAWL 269 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 H +N L+ + + L ++ A + A + PR + Sbjct: 270 HTEQDNYAAAFDEYRALDRLGDRQGQILFGFARRAADAQRYGVATRACEAIQEQYPRSGV 329 Query: 361 F 361 Sbjct: 330 A 330 >gi|294338775|emb|CAZ87109.1| putative UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT [Thiomonas sp. 3As] Length = 753 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 62/171 (36%), Gaps = 10/171 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+A ++ +G + + +L+L + A +L + +AE ++ + Sbjct: 55 LVAHAVPLHQQGRVGEAAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIA 114 Query: 289 VNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 P Y LL ++ +++ ++ ES +++ G + Sbjct: 115 AQPA---QGAYWNSLGRLLLLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLAGELA 171 Query: 343 QAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 +A A+++ P + LAQ+ + + ++ +A A P Sbjct: 172 EAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHYQLAASMAPDAP 222 >gi|301105357|ref|XP_002901762.1| CCR4-NOT transcription complex subunit, putative [Phytophthora infestans T30-4] gi|262099100|gb|EEY57152.1| CCR4-NOT transcription complex subunit, putative [Phytophthora infestans T30-4] Length = 706 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 6/114 (5%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ Y +AL + A TE + + A ++ + +R RA + + Sbjct: 595 ARSYTAEALCMLSRAAEATETL---QSERNLIAMAE---EYAREANIQLSRARAGVHVNN 648 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + +G + +++ N + L+ + +KA +L++ Sbjct: 649 ATSLLLQGRSSEAEESVTRAVRENPNCRESLELLVYVLLKKGDTKKAARVLKEA 702 >gi|296134823|ref|YP_003642065.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12] gi|295794945|gb|ADG29735.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12] Length = 733 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 64/175 (36%), Gaps = 10/175 (5%) Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +A L+A ++ +G + + +L+L + A +L + +AE ++ Sbjct: 31 QAQQLVAHAVPLHQQGRVGEAAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVR 90 Query: 285 KIWKVNPHPEIANIY------THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 + P Y LL ++ +++ ++ ES +++ Sbjct: 91 QAIAAQPA---QGAYWNSLGRLLLLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLA 147 Query: 339 GSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 G + +A A+++ P + LAQ+ + + ++ +A A P Sbjct: 148 GELAEAVKNYEQALRLQPGHAQARFGLAQVLRQLQGWAAALPHYQLAASMAPDAP 202 >gi|239988495|ref|ZP_04709159.1| hypothetical protein SrosN1_14397 [Streptomyces roseosporus NRRL 11379] Length = 341 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 81/265 (30%), Gaps = 13/265 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 P A + T + + + + A + + E A Sbjct: 66 GPRPTAALGLLLTRAELTDRDRAAALVARAWDRFRAGELDAALSDHGRAVAVDPRSERAH 125 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +G A +A +I+P W + Y A+T L++ Sbjct: 126 QGRAVILRSLGRHEEALADLDRAEEIAPAWAWAVRERGETYRRMGRLEEALTVLDRA--- 182 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + + A+ L +R L G + D ++ L A + ++ Sbjct: 183 -HALDPSDAVPLGSRGLVRHALGRHEEALDDFDRAIALWPEYAWALVRRSRVRTVLGDPV 241 Query: 278 KAEVILEKIWKVNPHP-----EIANIY-THLLSENTVGKLKRALRLEEINKESVESLVIV 331 A L++ ++NP E +Y E V RAL L + E + Sbjct: 242 GALADLDRAEELNPGRAGTEGERGEVYRATGRHEEAVACYGRALAL---DPEYAWAHGSR 298 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAP 356 + +G + +A A A+++ P Sbjct: 299 ALALEALGRLPEARADLDRALELDP 323 >gi|228960667|ref|ZP_04122312.1| TPR domain protein [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799031|gb|EEM46003.1| TPR domain protein [Bacillus thuringiensis serovar pakistani str. T13001] Length = 219 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + + ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVHYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|148668308|gb|EDL00638.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_b [Mus musculus] Length = 760 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 478 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 533 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 534 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 586 >gi|296157410|ref|ZP_06840245.1| glycosyl transferase family 9 [Burkholderia sp. Ch1-1] gi|295892182|gb|EFG71965.1| glycosyl transferase family 9 [Burkholderia sp. Ch1-1] Length = 601 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 66/206 (32%), Gaps = 15/206 (7%) Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ E+ + G L+SA+ + +AL + + A + +++ Sbjct: 20 LTALIDAALEAHQAGRLDSAESFYREALTLDSAHTGALHYFGVLHYQRGAHDIAASLMSR 79 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K +R+ A R L A G + + ++L+L + A +L +Q Sbjct: 80 ALK----LDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGAALQAQ 135 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVE 326 +A NP + HL + KL R L ++ S E Sbjct: 136 GALLEAVEHYRLALASNP----MLLDAHLNLGTALNKLARFDEALACYRHVLSLDPASAE 191 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAM 352 + G A A A+ Sbjct: 192 AHFSAGNTHQARGDHGAAIASFEQAV 217 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 82/269 (30%), Gaps = 18/269 (6%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQI-----ALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 M + L I A + + A L + + A++ Sbjct: 1 MEHQSQPERAHAAPPHTAYLTALIDAALEAHQAGRLDSAESFYREALTLDSAHTGALHYF 60 Query: 161 YFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 + G + A ++AL + A W +V A+ +Q + Sbjct: 61 GVLHYQRGAHDIAASLMSRALKLDRHDAACWSNRGLVA--AALGHLDEAMICYDQALQLQ 118 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 ++ A +L+ +G ++ + +L + A + +L + + Sbjct: 119 PDF--ADAHNNFGAALQ--AQGALLEAVEHYRLALASNPMLLDAHLNLGTALNKLARFDE 174 Query: 279 AEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A + ++P A+ H + + + + + E+ V + + Sbjct: 175 ALACYRHVLSLDPASAEAHFSAGNTHQARGDHGAAIASFEQAVALRADYAEAHVNLGSLI 234 Query: 336 LEMGSIDQAHAK--AMLAMKIAPRKEIFL 362 ++G A + +A+K P + L Sbjct: 235 GKLGDYAGAESHYRRAVALKPIPTHLVCL 263 >gi|283836291|ref|ZP_06356032.1| lipoprotein NlpI [Citrobacter youngae ATCC 29220] gi|291067654|gb|EFE05763.1| lipoprotein NlpI [Citrobacter youngae ATCC 29220] Length = 294 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 19/218 (8%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + + + ++S G A+ ++AL I PD P V + A Sbjct: 54 RALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 111 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN--SIM 261 + A + + +N + R + G + D + + N Sbjct: 112 FDAAYEAFDSVLELDPTYN----YAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 167 Query: 262 ASICAAKSLISQNKKRKA-----EVILEKIWKVNPHPEIANIYTHLLSENTV-GKLKR-A 314 + A+ + + + ++A E ++ W N I Y +SE+T+ +LK A Sbjct: 168 LWLYLAEQKLDEKQAKEALKQRFEKSDKEQWGWN----IVEFYLGNISESTLMERLKADA 223 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + E+ + K L +G +D A A LA+ Sbjct: 224 TDNTSLAEHLSETNFYLGKYYLSLGDLDNATALFKLAV 261 >gi|253997756|ref|YP_003049819.1| hypothetical protein Msip34_0043 [Methylovorus sp. SIP3-4] gi|253984435|gb|ACT49292.1| hypothetical protein Msip34_0043 [Methylovorus sp. SIP3-4] Length = 876 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 88/294 (29%), Gaps = 47/294 (15%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ-----IALAERQYNIAH--EK 142 L+++ A AR E L L Q +ALA +Q++ A Sbjct: 252 EALIALGAATPRTAR-------------GEALFQQLVYQNGVEDLALAIKQHDNARVDSL 298 Query: 143 LEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 E + + + + + + L +AQ AL + P + + Sbjct: 299 FEQLQPEIVARKDISQLLLVAWHDFKLER--LAAAQDLFATALAMEPQNDNARYGLALVF 356 Query: 199 VLAKEWSRAITF---LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + AIT L + N + L ++ D + A ++ L Sbjct: 357 AREQNHEEAITVAQGLPANDAGRNDLLLNAYLALAKQAYGQQDSQQTLNYLRQAKQAGAL 416 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA----NIYTHLLSENTVGKL 311 AS+ A S +A + +++ P E A Y L + + L Sbjct: 417 -PRY--ASLMEAWSQFGLGNTTQASEVFASLYRAQPDEESAAGVMASYLKLDRADDIAPL 473 Query: 312 KRALRLEEINKES-----------VESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 L K E+ + + + G I A A +A++ Sbjct: 474 ATTEPLASQYKHHVAAGLFGQKRFFEARALDADTYGDAGGIAAPQAGAGIALRD 527 >gi|168241280|ref|ZP_02666212.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205339167|gb|EDZ25931.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 389 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 + + A + +++ R AV L D +A Y A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136 Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + NS SI + +++ KA L+++ + L Sbjct: 197 DRAMAVLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 247 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351 +SE +L + + + V + L + I +A + A Sbjct: 248 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 307 Query: 352 -MKIAPRKEIF-LLL 364 ++ P +F L+ Sbjct: 308 QLQRHPTMRVFHKLM 322 >gi|57208423|emb|CAI42112.1| crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [Homo sapiens] Length = 836 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 648 RAIYELAI 655 >gi|78065635|ref|YP_368404.1| hypothetical protein Bcep18194_A4163 [Burkholderia sp. 383] gi|77966380|gb|ABB07760.1| TPR repeat protein [Burkholderia sp. 383] Length = 390 Score = 40.7 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 67/177 (37%), Gaps = 12/177 (6%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +L R+ A+Y L + + G L+ A+ K D Sbjct: 84 GETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALG- 142 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A++ Y + K+W+++I + + + K A + + + + A+ Sbjct: 143 AQRALLTIYEIEKDWNKSIDTAKRIESMSDKPLGVEIAQFHCELAQDALQRKNAAAAAEQ 202 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 +L + ++ A++ + + ++ A +++ NP Y L+++ Sbjct: 203 LRLALTVNPQNVRATVLSGDAAEAEGNHAAAIEHWKRVEAQNP------AYLPLVAD 253 >gi|326385464|ref|ZP_08207103.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326210003|gb|EGD60781.1| sulfotransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 677 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 82/290 (28%), Gaps = 19/290 (6%) Query: 114 HTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYSLYFESCRIGD 169 ++ ++ + A L + P + L + GD Sbjct: 36 RAQPDDPRAAMVLACALRLCGDAHGAVAALDLPVRAAPEDPV--LAGEWGLALVA--AGD 91 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 A A P +A+ + + A A + Sbjct: 92 HARAIAPLRLATRAQPRLARTWQALARALRMTGAEDEAWHADAGAVAAASVDP------M 145 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +A + G + L L + A + ++ +A V + + + Sbjct: 146 LAEAARAMTAGATDKAQALIERYLSLMPDDAAAIRLLGELAWRSGRQDQAIVHVTQAVAL 205 Query: 290 NPHPEIANIYTH---LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P E A ++ + ++ +++A L + +++ + I +++G D A Sbjct: 206 APGFEAARVFLARMLVEADRLPEAMEQADILVARAPDEPGLVMLRASILVKLGEQDAARV 265 Query: 347 -KAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM-PDPLW 394 L + +FL L + + H + + + A W Sbjct: 266 IYEDLIARGTAPAAVFLNLGHVAKTLGHAGKAVEAFRGAIARAPGSGEAW 315 >gi|262197790|ref|YP_003268999.1| hypothetical protein Hoch_4615 [Haliangium ochraceum DSM 14365] gi|262081137|gb|ACY17106.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM 14365] Length = 1402 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 109/332 (32%), Gaps = 41/332 (12%) Query: 74 HMLHKRNYDKGYKALYT--------GLMSIAAHN-----IPLARKMHSYVSQQHTFHNEY 120 + + + L G + A + + SY E Sbjct: 385 RYWRRGREAQALEILARVGRRFAGDGAVHTAIADLYTRWGKADLALQSYERLARIEPEEP 444 Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + + A ++ +A L+ A R KA Sbjct: 445 SHLVNLGEQYHMRGDTKQAMAVWRRIIARKTPANYARLG--EVFAEHNQLDEALRMYEKA 502 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + + P+ + + ++W + ++ + +L + + + ADK Sbjct: 503 IQMEPEQAAHYKGRAGVFERRRDW----------QSVSRAVDDWNKVLALLSNKD-ADKP 551 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 + + LK +S ++ AK+ ++ R+ + E + + Y Sbjct: 552 ARAEARRRIVSLLKRGPSS---AMSKAKASWQRDFWREPADV-EAGYL------LVEAYL 601 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 N+ + RL +++ + E+L +++K+A D A A +++P + Sbjct: 602 RDNKFNSAER--ELQRLLKLDPKDTEALELLAKVAERTYDYDAAVAHLERLAELSPNRRR 659 Query: 361 --FLLLAQIEQANSHNTDKILYWTQSALHAMP 390 F +A+++ A+ + + L + + AL A P Sbjct: 660 DYFNRIAELKTADRKDDE-ALEYARRALEASP 690 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 7/157 (4%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPATREFAVYSLY 161 A + + + E L L ++A Y+ A LE + + P R + Sbjct: 609 AERELQRLLKLDPKDTEALELL--AKVAERTYDYDAAVAHLERLAELSPNRRRDYFNRIA 666 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + A YA +AL+ SP+ P E + ++YV + + A + E Sbjct: 667 ELKTADRKDDEALEYARRALEASPNDPLAYERLAERYVEMQRFDEA----TEAYAKTIEL 722 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + A +L + + + E L+ + Sbjct: 723 DPRQFRAYFALALLHTHNHEPERAAELYREVLRRASD 759 >gi|284037111|ref|YP_003387041.1| hypothetical protein Slin_2220 [Spirosoma linguale DSM 74] gi|283816404|gb|ADB38242.1| TPR repeat-containing protein [Spirosoma linguale DSM 74] Length = 430 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 8/158 (5%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQIP-ATREFAVYSL 160 A+ + + + + +Y L+ + + Q++ A + + + P + L Sbjct: 135 AKALQNAQRAEILGVDTPELYTLQGDLLQRQNQFDKAKLYIAKALQMAPYDGEAYFYKGL 194 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + R GD A +L + P + Y + + A+ + Q + Sbjct: 195 M--AARQGDTIQALALYQHSLRLKPRYLETYNQLASIYRTTGDLNSALVYNGQALRYFPN 252 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 R L R L +G + ++ +++K+ Sbjct: 253 NPR----LYYGRGLIYHTEGKLDSAIVYYQQTMKVQPG 286 Score = 38.4 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 14/188 (7%) Query: 177 ATKALDIS-----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A +AL ++ P + + AV+ + + A+ +++ + Sbjct: 70 ALRALTLAINQSSPASAYAKRAVI--LLAMGRLNEALADIDEAISRNDNLGSY----YLT 123 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 R+ + +A + L ++ L QN+ KA++ + K ++ P Sbjct: 124 RAQVLRALQQPAKALQNAQRAEILGVDTPELYTLQGDLLQRQNQFDKAKLYIAKALQMAP 183 Query: 292 HPEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 + A Y L +T+ L + +E+ ++ I G ++ A Sbjct: 184 YDGEAYFYKGLMAARQGDTIQALALYQHSLRLKPRYLETYNQLASIYRTTGDLNSALVYN 243 Query: 349 MLAMKIAP 356 A++ P Sbjct: 244 GQALRYFP 251 >gi|206890487|ref|YP_002248931.1| TPR repeat [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742425|gb|ACI21482.1| TPR repeat [Thermodesulfovibrio yellowstonii DSM 11347] Length = 242 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 54/159 (33%), Gaps = 8/159 (5%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI--SP 185 E+ Y +A+ + + + P ++ ++ L + A+ + L + + Sbjct: 44 AYYIEKNYQLAYSEFHKALQIDPDNKDA-LHGLALVHMEFQEYEMAKDLFLRTLSLDNNY 102 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 W V Q + AI + N +++A + L G + Sbjct: 103 ADAWFNLGVCYQKLNMH--KEAIDAFQKALNNPLFVTQDKAYF--GQGLSLYRVGQYEEA 158 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 + +++K I A + A + N+ +A L+ Sbjct: 159 KNAFDKAIKRNVLLIPAHLYLALTYQKLNQYSEAVKTLK 197 >gi|70731837|ref|YP_261579.1| response regulator/TPR domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68346136|gb|AAY93742.1| response regulator/TPR domain protein [Pseudomonas fluorescens Pf-5] Length = 534 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 1/92 (1%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + G + A+ KAL P P + + + + V + RA L + + + Sbjct: 203 GLGRLLFKRGQVGEAKAVYEKALKAFPMMPGLYDGLAEVLVAEGDTQRAQNVLEEAVRLS 262 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAI 250 R +A LL ++ N D +Y A+ Sbjct: 263 PLAVRRQA-LLGKLAMANEDFDSASRAYRQAV 293 Score = 37.6 bits (86), Expect = 5.3, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 3/139 (2%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L + + + S+ A + + L + + +A+ + Sbjct: 162 RYAPLCLRYRADALRDMHQNEALERLYNSILADRPLPWAYVGLGRLLFKRGQVGEAKAVY 221 Query: 284 EKIWKVNP-HPEIANIYTH-LLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALEMGS 340 EK K P P + + L++E + + ++ +V ++ K+A+ Sbjct: 222 EKALKAFPMMPGLYDGLAEVLVAEGDTQRAQNVLEEAVRLSPLAVRRQALLGKLAMANED 281 Query: 341 IDQAHAKAMLAMKIAPRKE 359 D A A+ + Sbjct: 282 FDSASRAYRQAVSQGAQSR 300 >gi|325179646|emb|CCA14044.1| hypothetical protein SORBIDRAFT_08g016670 [Albugo laibachii Nc14] Length = 1005 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 83/259 (32%), Gaps = 41/259 (15%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQ-----------------QYVLAK 202 E+ G + +A+ +A + +P++ W+ ++ + Sbjct: 675 KEAWTNGSVENARLILRQAFNANPNSEQIWLAAVKLEWENDEIELARALLAKARAQAPSA 734 Query: 203 E-WSRAI--------------TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 + W ++I L E + + + E D+ D + Sbjct: 735 QVWMKSILLEREVGAAGSQEEELLKGGVSRFPESPKLHM--MAGQFYEYKDEPDFAEAKQ 792 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-LLSEN 306 ++ C SI I +++ KA +LE NP ++ ++ + E Sbjct: 793 KYRSGIQHCPKSIRLWILSSRLEEKMTGVTKARSVLELARLKNPKNDM--LWLESIRLEA 850 Query: 307 TVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 VG K L +E +S +++++ Q A + + + L +A Sbjct: 851 RVGNGKGQSILLSKALQECPDSGILLAESIESAPRPHQKRASFIALNRRDNDPSVCLAVA 910 Query: 366 QIEQANSHNTDKILYWTQS 384 ++ K+ W + Sbjct: 911 KLFWQERK-YTKVRKWLER 928 >gi|315637376|ref|ZP_07892591.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315478350|gb|EFU69068.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 503 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 8/129 (6%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEY---LVYLLEVQIALAERQYNIAHEKLEMML 147 L+ I A K++ + +++ L +LL + + A + + Sbjct: 379 ALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLS-----EKGEIGEAEKLYREAI 433 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 +I Y+L GD++ A++ +A+ I V + + A Sbjct: 434 KIDDKDSDIYYNLALLLKNKGDIDEAEKLYREAIKIDDKDLDVYNNLAVLLANKGDIDEA 493 Query: 208 ITFLNQKKK 216 K+ Sbjct: 494 EKLYKINKR 502 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 10/190 (5%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMMLQIPATREFA 156 I A K++ + ++ L L + + A + + ++I A Sbjct: 251 EIDEAEKLYREAIKIDDKNSNTYNNL----ALLLANKGEIDEAEKLYKEAIKIDDKYSKA 306 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 +L G+++ A++ +A+ I + E A + K Sbjct: 307 YNNLAVLLSEKGEMDEAEKLFREAIKIDDKNSNTYNNLALLLKNKGEIDEAEKLYREAIK 366 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + L +L A+KG++ + E++K+ D + A A L + + Sbjct: 367 IDDKNSNTYNNL----ALLLANKGEIDEAEKLYKEAIKIDDKNSKAYNNLAFLLSEKGEI 422 Query: 277 RKAEVILEKI 286 +AE + + Sbjct: 423 GEAEKLYREA 432 >gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens] Length = 621 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 10/166 (6%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALD 182 LL Q A E + T + L R G +A + Sbjct: 15 LLNALA--KAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQA 72 Query: 183 I--SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 P+ W +V A ++ A+ L + ++ R + +L A + Sbjct: 73 KGCKPNL-WTYNTLVDCLGKAGQFDEALRLL-AEMRDNGCVPDVRTYNCLISTLGKAGRL 130 Query: 241 DMIASYHDAIESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEK 285 + + + S+ L + +KA +LE+ Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYG--LGKVGRSQKAMELLEE 174 >gi|170019168|ref|YP_001724122.1| TPR repeat-containing protein [Escherichia coli ATCC 8739] gi|169754096|gb|ACA76795.1| Tetratricopeptide TPR_2 repeat protein [Escherichia coli ATCC 8739] Length = 1093 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + +L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQHSLRTCPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|153006532|ref|YP_001380857.1| hypothetical protein Anae109_3694 [Anaeromyxobacter sp. Fw109-5] gi|152030105|gb|ABS27873.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 638 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 78/241 (32%), Gaps = 18/241 (7%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R GD A A+ +P + ++ + + + A + + A R Sbjct: 57 RAGDPRGAVDALRLAVAHDGTSPELRVSLAEALLELDRFDAAEAEARKALELAGGAGRTA 116 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--------AKSLISQNKKR 277 + + + A + + + + +++L + A A + + Sbjct: 117 SEAHVLLARLAAGRDRIEEATLELRRAVRLEADLAARGERADALPWRLLADLYLDLGDEA 176 Query: 278 KAEVILEKIWKVNPH-PEIANIYTHLLSENTVGKLK------RALRLEEINKESVESLVI 330 A LE + PH P A L + + + R E++ VE+L + Sbjct: 177 AAARTLE---DLGPHAPAEAAAGLRELGRALLDRGQPGRAEHGLRRAAELDPAEVEALRL 233 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 ++ +G +A + ++ P L+ A + + ++ W + A Sbjct: 234 LAAAHEALGRDGEARDDHLAVLRREPDDAASLVALGHLAAQAGDAERAREWFRRHARAAG 293 Query: 391 D 391 D Sbjct: 294 D 294 >gi|172060347|ref|YP_001807999.1| cellulose synthase domain-containing protein [Burkholderia ambifaria MC40-6] gi|171992864|gb|ACB63783.1| cellulose synthase operon C domain protein [Burkholderia ambifaria MC40-6] Length = 1315 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 105/357 (29%), Gaps = 73/357 (20%) Query: 70 AMLFHMLHKRNY---DKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE 126 A L + D Y A GL ++A ++ A + + +Q + L Sbjct: 291 ATLDRQRDAQRRLERDPDYIAQQRGLQALARGDLAGADPLLARAAQARADDADALGG--L 348 Query: 127 VQIALAERQYNIAHEKLEMML---QIPATREFAV------YSLYFE---SCRIGDLNSAQ 174 + L E +++ A + + + L + + G A+ Sbjct: 349 GLLRLREGRHDEARALFTRAAARSTDQRGKWQGLARTAQFWGLLAQGRAAASAGRPQDAE 408 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN---------------------- 212 R A AL + PD+P +V + ++W+RA L Sbjct: 409 RAARAALAMQPDSPDAKLQLVDALLAQRDWARAEPLLRELLAARSPTLSAVRGTAMLYEN 468 Query: 213 --------------QKKKNAKEWNRN----RAILLIARSLENADKGDMIASYHDAIESLK 254 Q + ++ R RA LL +++ ADKG+ + +++ Sbjct: 469 TGRADRVGPLLDALQGRVTGRDDRRALDGLRADLLASQARALADKGERGPAAQRYEAAVR 528 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP--------------EIANIYT 300 ++ A+ + +++ + P +IA Sbjct: 529 AAPDAPWTRFALARLYRDMGLPQLGRTVMDDGLAQSDTPEMRYATALYRNSLDDIAGAQA 588 Query: 301 HLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L + + L K E + ++ AL G A A AP Sbjct: 589 ALAGVDDAHRSDGMRALA--RKLDAEGALADARGALGRGDRAAFAASLTHAQTSAPD 643 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 73/281 (25%), Gaps = 36/281 (12%) Query: 126 EVQIALAERQYNIAHEKLEMML----QIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + + + + A ++ E + P TR L +G + L Sbjct: 506 QARALADKGERGPAAQRYEAAVRAAPDAPWTRFA----LARLYRDMGLPQLGRTVMDDGL 561 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFL------NQKKKNAKEWNRNRAILLIARSLE 235 S D P + A + + A L ++ + A +A + Sbjct: 562 AQS-DTPEMRYATALYRNSLDDIAGAQAALAGVDDAHRSDGMRALARKLDAEGALADARG 620 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 +GD A + + I + L +PH Sbjct: 621 ALGRGDRAAFAASLTHAQTSAPDDPDMLAAIGAQWIDAGDPERGLAPLRDWIAAHPHE-- 678 Query: 296 ANIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSK-----------------IALE 337 A+ L + +G R L + E + ++ A+ Sbjct: 679 ADTDVRLRYGDLLGSAGRDDALAAWLDALRREPALTAAQTARIEDQSLRLVLRQTDDAIA 738 Query: 338 MGSIDQAHAKAMLAMKI-APRKEIFLLLAQIEQANSHNTDK 377 +A A + K L LA +E+A H Sbjct: 739 RQDYARARTLLDRASEAGRADKRYALELADLERAQGHYDAA 779 Score = 36.8 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 32/272 (11%) Query: 148 QIPATREFAVYS--LYFESCRIGDLN----SAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + + + L ++ + D +AQRY A+ +PDAPW A+ + Y Sbjct: 489 RDDRRALDGLRADLLASQARALADKGERGPAAQRY-EAAVRAAPDAPWTRFALARLYRDM 547 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS------YHDAIESLKL 255 T ++ + A L SL++ + D + +L Sbjct: 548 GLPQLGRTVMDDGLAQSDTPEMRYATALYRNSLDDIAGAQAALAGVDDAHRSDGMRALAR 607 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTH--LLSENTVGKLK 312 + ++ A+ + + + L P P++ + + + L Sbjct: 608 KLD-AEGALADARGALGRGDRAAFAASLTHAQTSAPDDPDMLAAIGAQWIDAGDPERGLA 666 Query: 313 RALRLEEINKESVESLV-IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 + ++ V + L D A A + A++ P A+IE + Sbjct: 667 PLRDWIAAHPHEADTDVRLRYGDLLGSAGRDDALAAWLDALRREPALTAAQT-ARIEDQS 725 Query: 372 -------------SHNTDKILYWTQSALHAMP 390 + + A A Sbjct: 726 LRLVLRQTDDAIARQDYARARTLLDRASEAGR 757 >gi|114681189|ref|XP_514541.2| PREDICTED: crooked neck-like protein 1 isoform 4 [Pan troglodytes] gi|114681191|ref|XP_001143710.1| PREDICTED: crooked neck-like protein 1 isoform 3 [Pan troglodytes] Length = 740 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 373 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 432 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 433 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 492 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 493 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 551 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 552 RAIYELAI 559 >gi|124256489|ref|NP_057736.4| crooked neck-like protein 1 [Homo sapiens] gi|147744555|sp|Q9BZJ0|CRNL1_HUMAN RecName: Full=Crooked neck-like protein 1; AltName: Full=Crooked neck homolog; Short=hCrn gi|57208424|emb|CAI42113.1| crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [Homo sapiens] gi|162317768|gb|AAI56790.1| Crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [synthetic construct] Length = 848 Score = 40.7 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 660 RAIYELAI 667 >gi|229496965|ref|ZP_04390670.1| TPR domain protein [Porphyromonas endodontalis ATCC 35406] gi|229316067|gb|EEN81995.1| TPR domain protein [Porphyromonas endodontalis ATCC 35406] Length = 333 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 84/254 (33%), Gaps = 40/254 (15%) Query: 130 ALAERQYNIAHEKL-EMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 A +Y A + + + P TR Y L RIG A ++ ++ P+ Sbjct: 47 ASKIGEYPFAIKAFGKALELRPEFETR----YYLAETLMRIGATRQALKHLDLLVEEEPN 102 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++ +AI L +E ++ A+L + + + + Sbjct: 103 HLTTRIYRAKAEYEEGQYDKAIEDLKTALALTEE-EKDLALLHRLLAANYLAQKEWQNAV 161 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 +A +++ L D +S+ K+L++ + +A L + ++ P Sbjct: 162 DEATKAIDLHDEEPTSSLYKTKALVALEQWDEATEFLREAFRAFP--------------- 206 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLA 365 + + + IAL G A A+ P ++ L Sbjct: 207 EEERF----------------HLYEADIALAKGDYPAAQTAYRTALDKDPFNEDACCGLG 250 Query: 366 QIEQANSHNTDKIL 379 IE+ + + + I Sbjct: 251 HIEELSGNLSQAIQ 264 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 7/166 (4%) Query: 122 VYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + + E QY+ A E L+ + + L + +A AT Sbjct: 106 TRIYRAKAEYEEGQYDKAIEDLKTALALTEEEKDLALLHRLLAANYLAQKEWQNAVDEAT 165 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 KA+D+ + P + + V ++W A FL + + E R + + Sbjct: 166 KAIDLHDEEPTSSLYKTKALVALEQWDEATEFLREAFRAFPEEER----FHLYEADIALA 221 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 KGD A+ +L + A +A +L+ Sbjct: 222 KGDYPAAQTAYRTALDKDPFNEDACCGLGHIEELSGNLSQAIQLLQ 267 >gi|209550939|ref|YP_002282856.1| hypothetical protein Rleg2_3363 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536695|gb|ACI56630.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 289 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 11/137 (8%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A ++ A + L R + L ++ D A +KA+ ++P Sbjct: 151 AGQDDQAFNDFDKAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++P Y+ + A N +A E N N A ++L +GD + Sbjct: 204 NSPEPYNGRGISYIALNDNDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259 Query: 246 YHDAIESLKLCDNSIMA 262 ++ L A Sbjct: 260 ARSYRHAVGLDPKYQPA 276 >gi|158313584|ref|YP_001506092.1| tetratricopeptide domain-containing protein [Frankia sp. EAN1pec] gi|158108989|gb|ABW11186.1| Tetratricopeptide domain protein [Frankia sp. EAN1pec] Length = 162 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 2/116 (1%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y G+ + + A ++ ++ V + QY+ A Sbjct: 45 YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALGRAQFEAGQYDDALRTFA 102 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 ++ T ++A + L + R GDL SA + A+ + PD A+ Sbjct: 103 WIVDRHPTDDYAQFGLGMAARRTGDLRSAVEHLALAVAMRPDLAHYGVALRGARAA 158 >gi|119630613|gb|EAX10208.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_c [Homo sapiens] Length = 836 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 648 RAIYELAI 655 >gi|71748268|ref|XP_823189.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70832857|gb|EAN78361.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 776 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 12/142 (8%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNR------NRAILLIARSLENADKGDMIASYHDAIES 252 W A+ L + + + A++++A + ++GD+ A+ + Sbjct: 376 SKGGAWEEALQCLTAAAGIRIDGEKDAVLAQHHAVVVMAYARLVEERGDVAAARSALAKC 435 Query: 253 LKLCDNSIMAS-----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 ++ A I AA + +A+ +L ++P PE+ + L S Sbjct: 436 IRHFP-FKTACCPRLWIEAAALEERHGEFVQAQKLLAASLNISPCPEVFDAALRLESNAC 494 Query: 308 VGKLKRALRLEEINKESVESLV 329 A + ++ ES + Sbjct: 495 AAGEVSAESCVQRSRAIYESAI 516 >gi|332186506|ref|ZP_08388250.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17] gi|332013489|gb|EGI55550.1| tetratricopeptide repeat family protein [Sphingomonas sp. S17] Length = 574 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 49/190 (25%), Gaps = 5/190 (2%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + GD +A++ A AL + + ++A ++ Sbjct: 390 LQLAQEEGDRGAARQ-AMAALLDGRALEPGALRRISALADGLDPAQARALAERRIAAGIA 448 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R+R + + + GD + E L + A A + A Sbjct: 449 GPRDR----LDLAWAAWNAGDAARTRDWLHEYLVEAPGDLPALRLMADAQARLGGPAAAR 504 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 LE+ P L + E + +++ + G Sbjct: 505 PWLERALLQAPRTGRTRAELLDRLGRRAEALALVTAMRRAAPRDAELAALQARLLIAAGQ 564 Query: 341 IDQAHAKAML 350 +A A Sbjct: 565 PGRARAVLTP 574 >gi|329960080|ref|ZP_08298544.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] gi|328533032|gb|EGF59805.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] Length = 283 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 13/192 (6%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAVYS- 159 + + SY + + L + L + +A ++ T + + Sbjct: 78 KALESYTFALNIAPRTVPILLNRAALYLELGKDELARVDY-SLVLDMETGNQEALLMRAY 136 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 +Y + D +A+ + L ++P + + + A++ LN+ + Sbjct: 137 IYRQKR---DYKAARSDYERLLKLNPLSYNGRLGLATLEQKEGNYEEALSLLNRMIADKT 193 Query: 220 EWNRN-----RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + A+L +AR+ D + D E++ L + + + +SQ Sbjct: 194 DGTAQISTPLYALLYVARAGVEQDMKHTDLALIDLEEAVSLDASQPETYLTRGQIYLSQK 253 Query: 275 KKRKAEVILEKI 286 KK A+ EK Sbjct: 254 KKDLAKRDFEKA 265 >gi|332142021|ref|YP_004427759.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327552043|gb|AEA98761.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 918 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + + G+ A + T+ LDI P+ V + L E+ +A +N + Sbjct: 211 QLAMKSGENEKAVAHMTELLDIWPNIAIVQITSAHAFALNGEYDKAFNIINS-VSSEARS 269 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 I +N ++ + A+ + L + DN I A + + A Sbjct: 270 PWLDKISAEIYLRKNENESALKAAEEAIDKGLSIEDNFI----IAGTAAFKLGRNETAYE 325 Query: 282 ILEKIWKVNP 291 L+K + NP Sbjct: 326 YLKKAYAKNP 335 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 39/215 (18%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYL-VYLLEVQIALAERQYNIAHEKLEMMLQ 148 GL+S+ + ++ A+ N + LL Q ++ Sbjct: 716 EGLVSLRSGDVKSAKSQLEQA----LLINPSVPTALLVAQ---LNKESE----------- 757 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYA------TKALD----ISPDAPWVTEAV---V 195 P T A+ S++ +S DL+ YA +AL I + P A+ Sbjct: 758 -PLTGLNALESVFIDSNNEKDLHILAEYAASVGFLDRALAYYDQIVYNFPESHIALNNKA 816 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + ++++ AI + D+ ++++ +ES Sbjct: 817 NILIEKEKFTEAIELAENAYNIRQNPAYLDTKGWAEYKAGQVDRA--VSTFKLLLESQ-- 872 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A++ A+ ++Q + A L++ ++ + Sbjct: 873 -PRYEAAAVHLAEIYLAQGDRASASK-LKQAFQSS 905 >gi|262304983|gb|ACY45084.1| acetylglucosaminyl-transferase [Eremocosta gigasella] Length = 290 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%) Query: 177 ATK----ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + AL + P + A + + E+ A Sbjct: 39 AEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPEF----AAAHSNL 94 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 + +G + + E++++ A +L + A + ++NP Sbjct: 95 ASVLQQQGKLNEALMHYKEAIRISPTFADAYSNMGNTLKEMGDIQGALQCYTRAIQINPA 154 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 H +A+I H S N + ++ E ++ ++ Sbjct: 155 FADAHSNLASI--HKDSGNIPEAISSYRTALKLKPEFPDAYCNLA 197 Score = 38.4 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 66/215 (30%), Gaps = 22/215 (10%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Q A E L++ T ++ +L G + A R KAL++ P+ Sbjct: 27 ANALKEKGQVPEAEECYNTALRLCPTHADSLNNLANIKREQGYIEEATRLYLKALEVFPE 86 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + A+ + + + + A + GD+ + Sbjct: 87 FAAAHSNLASVLQQQGKLNEALMHYKEAIRISPTF----ADAYSNMGNTLKEMGDIQGAL 142 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PE----IANIYTH 301 ++++ A A +A K+ P P+ +A+ Sbjct: 143 QCYTRAIQINPAFADAHSNLASIHKDSGNIPEAISSYRTALKLKPEFPDAYCNLAH-CLQ 201 Query: 302 LLSE--NTVGKLKRA----------LRLEEINKES 324 ++ + + ++K+ RL ++ Sbjct: 202 IVCDWTDYEARMKKLVAIVADQLDKNRLPSVHPHH 236 >gi|194451266|ref|YP_002045752.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194409570|gb|ACF69789.1| tetratricopeptide repeat protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 389 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 39/255 (15%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRY--ATKALDISPDA 187 + + A + +++ R AV L D +A Y A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGR------DYMAAGLYDRAEDMFNQLTDE 136 Query: 188 PW----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDM 242 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 137 TEFRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDM 196 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + NS SI + +++ KA L+++ + L Sbjct: 197 DRAMAVLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRVIVQD---------KEL 247 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIV-----SKIALEMGSIDQAHAKAMLA------ 351 +SE +L + + + V + L + I +A + A Sbjct: 248 VSETLEMLQTCYQQLGKNAEWAEFLRRAVEENTGAGAELMLADILEAREGSDAAQVYITR 307 Query: 352 -MKIAPRKEIF-LLL 364 ++ P +F L+ Sbjct: 308 QLQRHPTMRVFHKLM 322 >gi|119630615|gb|EAX10210.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_e [Homo sapiens] Length = 848 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 660 RAIYELAI 667 >gi|114681193|ref|XP_001143571.1| PREDICTED: crooked neck-like 1 protein isoform 2 [Pan troglodytes] Length = 679 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 312 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 371 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 372 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 431 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 432 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 490 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 491 RAIYELAI 498 >gi|298243358|ref|ZP_06967165.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gi|297556412|gb|EFH90276.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 365 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 28/270 (10%), Positives = 78/270 (28%), Gaps = 42/270 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS---------- 184 ++ A + + + A+ L +GD + A + L+ + Sbjct: 45 NWSQAILYFSELSKQDEEDKEALIGLATALDAMGDYEALLETARRMLETALNSAQGLAFK 104 Query: 185 ------------------------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + P +L + + A+ + A + Sbjct: 105 ARALQKLERISEATIANDQALLLDTNLPLAWLNRSGLQLLQQRFPEALRSAQRAVTLAPD 164 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 A + + + + + + ++L+L ++ + L + ++ Sbjct: 165 ----DARTWANQGVALLNFNRLNEALENFSKALELDPQNLFVLQMKGEILCRLGRMQEVI 220 Query: 281 VILEKIWKVNP--HPEIANIYTHLLSENTVGKLKR-ALRLEEINKESVESLVIVSKIALE 337 + + ++P P + L S LK A L +++ + + Sbjct: 221 AVTREALLMHPGHTPSLIQAVQALRSLEMYDALKEVARELIAQVPDNLFAWENYMRAWRG 280 Query: 338 MGSIDQAHAKAMLAMKIAPRK-EIFLLLAQ 366 +G ++A +++ P + L A Sbjct: 281 LGLYEEASETLDQLLQLDPDSVRFWTLKAD 310 >gi|296122022|ref|YP_003629800.1| hypothetical protein Plim_1771 [Planctomyces limnophilus DSM 3776] gi|296014362|gb|ADG67601.1| Tetratricopeptide TPR_4 [Planctomyces limnophilus DSM 3776] Length = 339 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 23/196 (11%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y+ + A + + +L + + D A+Y L Sbjct: 135 YLELGQIDEAQLASEAALLRDSQSVSAKMLL----GKIHEKQRDYDAAYEMYRSVSDLWP 190 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHP------------EIANIYT-HLLS 304 + + A + A+ I + + +A IL ++ HP ++ Y + Sbjct: 191 DDVAAKLAMARVQIERGQADRACPILR---ELMHHPYATLPQQREAEWQLGLAYASNQRW 247 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 E+ V +L++++ E++ + +++ GS + A ++ + P L Sbjct: 248 EDAVQRLEQSIAERELSADDW---YHLAEAQFHTGSGEHARISVQKSLAMQPDHRGATTL 304 Query: 365 AQIEQANSHNTDKILY 380 AQ+ AN+ Sbjct: 305 AQMLSANTGADAIAKG 320 >gi|303279024|ref|XP_003058805.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459965|gb|EEH57260.1| predicted protein [Micromonas pusilla CCMP1545] Length = 669 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 8/188 (4%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL I A V + E L L ++ + A + LE++ Sbjct: 450 GLAYIKLGAYEDALAAFRKVHAMTPDNAEVLYQL--GNVSDMLGDFPAAIKHLEILHAKV 507 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 +T + L IGD A Y ++ + P V + YV W +A Sbjct: 508 STDPGILARLGAIHAAIGDEAKALHYYQESHRLYPSDMDVLRWLGTFYVKTGNWEKAREL 567 Query: 211 LNQK-KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 K+ + R + N + D +A+Y K+ +++ + Sbjct: 568 YQLACMIKPKDVKYRLLVATCLRKVGNVN--DALAAYETI---HKVYPDNVECLRHLCRL 622 Query: 270 LISQNKKR 277 + + Sbjct: 623 YGDLGRTK 630 >gi|153006215|ref|YP_001380540.1| hypothetical protein Anae109_3372 [Anaeromyxobacter sp. Fw109-5] gi|152029788|gb|ABS27556.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5] Length = 4095 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 64/190 (33%), Gaps = 7/190 (3%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + A+ AL + PD+ A+ + Y + W+ A+ L ++ + A I + Sbjct: 3204 DRAEAIFNHALQLEPDSREAVSALGRLYERSGNWNLALDMLRREARIAGGARDAVDIHVR 3263 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMAS-ICAAKSLISQNKKRKAEVILEKIWKV 289 ++ D + +L+L + A + +++ R E+++E+ Sbjct: 3264 IGAIHEDMLMDPAGAKEAYARALQLDAGCLPAIRALKGIAERERDRDRYLEMLVEEARYT 3323 Query: 290 NPHPEIANIYTHL------LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 E +YT ++ + + ++ ++ I + + Sbjct: 3324 ADAAEKTRLYTAAGRVYHEERDDRDQAARYYEEALKRTPGHPDAARPLADIYVALSRWPD 3383 Query: 344 AHAKAMLAMK 353 A ++ Sbjct: 3384 AERVLDAVVE 3393 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 85/308 (27%), Gaps = 23/308 (7%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R + + L +I + + + L + R A+ +L+ E Sbjct: 294 RALERIDRAWAFLPGDPAALDLLARIHGEKGDHRGYSDALARLAAQTRDR-AALVALHLE 352 Query: 164 SCRIG-----DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 R+ D +SA KAL + P + + A + A+ L + A Sbjct: 353 MARVDVVRFSDADSALAALGKALALDPACEPAALQAFEHHADAGRFEEALATLERHLAAA 412 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + + + A L GD + +L+ A+ A L + Sbjct: 413 QPKAAHAPLRVRAAQLARERLGDPARARRHLEAALRADPGHAPAAAALAPLLEEAEEWSA 472 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLS---------ENTVGKLKRALRLEEINKESVESLV 329 +LE + + A L L+ R + + Sbjct: 473 LAQVLEASAGLE--RDRAERIRILERLAEVQQEQLGRPKEALRTLSRALALEPSRAATRK 530 Query: 330 IVSKIALEMGSI-DQAHAKAMLAMKIAPRKEI----FLLLAQI-EQANSHNTDKILYWTQ 383 + A + D A A + +A+I ++ + + W Sbjct: 531 AMEGAAARADAFLDLVRAYRAAATAVQDDLRAKKTLLRRVAEILDRDLGKPDEAVGAWRA 590 Query: 384 SALHAMPD 391 A D Sbjct: 591 LAELDPED 598 Score = 37.6 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 65/223 (29%), Gaps = 3/223 (1%) Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P R + + R D ++A + L P A+ + + + W Sbjct: 1174 PELRAAILRERAELADRRKDPDAAAEAWGRLLSACPSDREALSALRRLHRGRERWGELSD 1233 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + A + L ++ GD + + + A+ + Sbjct: 1234 VCAEIARRAGDPAAREDALREEAAVAEGKLGDPARAAAAWTQVAAIAAEDAEAAAALERL 1293 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVE 326 ++ + LE+ PE A L ++ G L+ L + Sbjct: 1294 HERLDRPAELAAALERRLARGFDPEAAARLAELRRTRLDDPAGALELHSELLRRDPARTA 1353 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 S + +A G + + A A + + A+ E+ Sbjct: 1354 SRDAIVGLAATAGEVGRDALDLADAALTAAGEHALRVAAREER 1396 Score = 36.8 bits (84), Expect = 8.9, Method: Composition-based stats. Identities = 38/296 (12%), Positives = 83/296 (28%), Gaps = 28/296 (9%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML---QIPA 151 +A + A + + E + L + + L L + P Sbjct: 2100 LALGDPRRAAEAWQRLLDLAPDDREAIAGL--AAALRDGAEPEALAQALRRALSVEESPE 2157 Query: 152 TREFAVYSLY-FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R L + R+GD+ A + + L+++P + + V + W Sbjct: 2158 ARAALHAELAVLQDERLGDVTGAIQSLREVLELAPHDRDALARLDRLCVRTERWVDLADV 2217 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKG---DMIASYHDAIESLKLCDNSIMASICAA 267 L ++ A A++ + + L + D + E L + A Sbjct: 2218 LAREIAAAAAAGDEAALVPLRQRLAELSETRLLDREGAVSLYEEVLAARPDHPEAIARLE 2277 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 L +A ILE + + + + +E Sbjct: 2278 AILQKDPGNARAAAILEDAY--------------ARGGDVSKQAAVLEVRAAERPDPLER 2323 Query: 328 LVIVSKIA----LEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKI 378 + ++A ++G A A + P + + +A+ H + Sbjct: 2324 KALYVQLAELREAQLGDPQLAFLALCKAFREDPADPALRARMETLAEASGHEEELA 2379 >gi|11055967|gb|AAF65571.2|AF255443_1 CGI-201 protein [Homo sapiens] Length = 836 Score = 40.7 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 469 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 528 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 529 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 588 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 589 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 647 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 648 RAIYELAI 655 >gi|323188337|gb|EFZ73629.1| tetratricopeptide repeat family protein [Escherichia coli RN587/1] Length = 1093 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|330927740|ref|XP_003301979.1| hypothetical protein PTT_13645 [Pyrenophora teres f. teres 0-1] gi|311322904|gb|EFQ89927.1| hypothetical protein PTT_13645 [Pyrenophora teres f. teres 0-1] Length = 1669 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 4/136 (2%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL +A A Y A + + +L + A+ +L + A+ Y +A+ + Sbjct: 553 LLGGCLAYALGDYQKAQDWYKHILTLDKDHVEAISNLAATMLALQQKREAENYWRRAVKL 612 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P E ++ ++ A+ + + ++ K R A+ RSLE + Sbjct: 613 RPSYFEAVEHLIGLLCSDQKSREAVQVIEEVERQLKFAKRADAM----RSLEIESERSTS 668 Query: 244 ASYHDAIESLKLCDNS 259 ++ Sbjct: 669 DLSESSVSEASDRPVF 684 >gi|228923147|ref|ZP_04086438.1| TPR domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836526|gb|EEM81876.1| TPR domain protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 219 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFNEAKAVFEQAMQAGL----QSADVTFMVGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|254423262|ref|ZP_05036980.1| peptidase, M48 family [Synechococcus sp. PCC 7335] gi|196190751|gb|EDX85715.1| peptidase, M48 family [Synechococcus sp. PCC 7335] Length = 473 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 3/99 (3%) Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 ++ + + + L+ + A A++L +A +LE+ + Sbjct: 90 QQAQTSLSRNRQERALVFLKNLLERSPEFVPAYSLLAEALQDTEASDEALAVLEQASTLF 149 Query: 291 PH-PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVE 326 PH +IAN L + + A +N + E Sbjct: 150 PHDADIANARISALRSVDQPLEASIAARLFAMVNPDHPE 188 >gi|149202967|ref|ZP_01879938.1| TPR domain protein [Roseovarius sp. TM1035] gi|149143513|gb|EDM31549.1| TPR domain protein [Roseovarius sp. TM1035] Length = 595 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 85/285 (29%), Gaps = 27/285 (9%) Query: 81 YDKGYKALYTGLMS----IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 +G L G++S + ++ A V+++ + + + + + + Sbjct: 145 EGRGVGDLADGMISAWADLGKGDMTSALARFDDVAKERGLRSFAIYH--KALALASVGDF 202 Query: 137 NIAHEKLEMMLQIP--ATREFAVYSLYFESCRIGDLNSAQRYATKAL--DISPDAPWVTE 192 A + P TR V ++G+ A D+ P+ Sbjct: 203 EGADKVFSGEDDGPIQRTRR-GVIGWSQVLSQLGEHERAVTIIDDTFGTDLDPEIE---- 257 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 ++ + L N+ + + R+L + + Y E Sbjct: 258 -TLRARLADG------ESLPFDLVNSASDGISEVFFSLGRALMQEANDEYVLIYARVAEM 310 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVG 309 +K + A + AA L + A +K+ + +P +A + + Sbjct: 311 IK--PAHVDAVLMAADLLEDLERFDLAIEAFKKVPRDHPSYHLAELGRSDVLRRAGKPDA 368 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 ++ +L + E V V + A A+++ Sbjct: 369 AIEVLEQLAKDYPNLAEVHVAVGDLHRSQEDFSAAVPAYDRALEL 413 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 64/169 (37%), Gaps = 1/169 (0%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 L+ + ++++A E + + + + A R G ++A + Sbjct: 320 LMAADLLEDLERFDLAIEAFKKVPRDHPSYHLAELGRSDVLRRAGKPDAAIEVLEQLAKD 379 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P+ V AV + +++S A+ ++ + + ++ + AR++ + + Sbjct: 380 YPNLAEVHVAVGDLHRSQEDFSAAVPAYDRALELYQSRGNDQWFVRYARAISHERLDNWP 439 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQN-KKRKAEVILEKIWKVNP 291 + D +L+L + +++ ++ +A ++E+ P Sbjct: 440 EAEADFRRALELNPDHPQVLNYLGYTMVEKHINLDEALNMIERAVAAQP 488 >gi|85858724|ref|YP_460926.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85721815|gb|ABC76758.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus SB] Length = 563 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 7/170 (4%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 L AI L ++ + L+ + +KGD + ESL Sbjct: 50 LSALDGRLDDAIQELETALRHDPLSSH----LMKELASLYVEKGDFRRAVDLCKESLVHD 105 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKR 313 + + + I+ + A K+ +++P A +Y + +E + Sbjct: 106 PDDVDVHLILGNLYINMKDYKNAIRSYRKVIEIDPKNTSAYLYLGTLYAETERYDKAVDM 165 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 L + + ++V ++K+ +E+ +A + + P E L+ Sbjct: 166 YSLLLKNDHDNVMGTYYMAKVLVELRRESEAEQYFKKTLLLKPSLESALI 215 >gi|53804390|ref|YP_113965.1| TPR domain-containing protein [Methylococcus capsulatus str. Bath] gi|53758151|gb|AAU92442.1| TPR domain protein [Methylococcus capsulatus str. Bath] Length = 699 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 85/247 (34%), Gaps = 39/247 (15%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Q + A + + +L+ ++ + R G + A +KAL+ +P+ Sbjct: 31 GQIDKAEQAVLTLLERKPNDANILHLAGVVALRKGQNSRAVALISKALEYAPNESLYYFN 90 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAK--EWNRNRAILLIARSL-ENADKGDMIASYHDAI 250 + Y+ AI Q ++A + R A + + +L E + +A++ + Sbjct: 91 LGNAYLA----DGAIDLGIQALQDATRLDPERMEAWMNLGLALVEAKRHPEAVAAFERLL 146 Query: 251 E---SLKLCDNSIMASICAAKSL----------------ISQNKKRKAEVILEKIWKVNP 291 E + A + A L + +R A ++ Sbjct: 147 EIDPDHEADVAFASALVGAGIMLKESAMVDRGISVLESKLRDGYERYAAGVI-------- 198 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +A H + + L E N E + +++ +++G +++A L Sbjct: 199 ---LARALEHRNRLSEAIRQH--QALLEANPEHIGIRNNLARCLVQLGRVEEARTHYRLC 253 Query: 352 MKIAPRK 358 +K AP K Sbjct: 254 VKSAPDK 260 >gi|113474349|ref|YP_720410.1| hypothetical protein Tery_0481 [Trichodesmium erythraeum IMS101] gi|110165397|gb|ABG49937.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 3145 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 11/198 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + + + A +L G+L+ A Y +AL+I+P+ Sbjct: 1143 GDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKGNLSKASNYYQQALEINPNYAEAWCN 1202 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + AI + + + ++ A +KG++ + + ++L Sbjct: 1203 LGVILLKQGQIELAIEYFRKSLELNPDY----AQAYNNLGFVFQEKGNLSKASNYYQQAL 1258 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTV 308 ++ N A L Q + A K ++NP H + + N Sbjct: 1259 EINPNYAEAWCNLGVVLRKQGQIELAIEYFRKSLELNPDYAMTHNSLGVTFEE--EGNFT 1316 Query: 309 GKLKRALRLEEINKESVE 326 + + E+ E Sbjct: 1317 ASIASYQKALELEPNFPE 1334 >gi|317484227|ref|ZP_07943156.1| sigma-54 interaction domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924576|gb|EFV45733.1| sigma-54 interaction domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1033 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 6/79 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + M + Y+L IG + SA+ A A + + W+T Sbjct: 267 GDWLNRIALFHAMSISQSAMYLGRYTL-----AIGTVESARHSAELAGEKTFSLLWLTHF 321 Query: 194 VVQQYVLAKEWSRAITFLN 212 + +W A+ L+ Sbjct: 322 CF-LLLRKGDWDEALNHLD 339 >gi|301119041|ref|XP_002907248.1| anaphase-promoting complex subunit 7, putative [Phytophthora infestans T30-4] gi|262105760|gb|EEY63812.1| anaphase-promoting complex subunit 7, putative [Phytophthora infestans T30-4] Length = 639 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 89/281 (31%), Gaps = 21/281 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L++ + Y A E + ++ P ++ L + D A Sbjct: 288 LVQAHMDTERGNYRAAVESFNALERVFPKN----LHCLLHKGTLESDQEL-LHQAHVTFK 342 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + + + + +Y + T LN + + + +RA +A + N KGD Sbjct: 343 RARQTDDLNLSFMDRYANCLRRGNSRTNLNDLVQELFKISSSRAESWLAAAYYNDVKGDY 402 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + ++ A + + L+ + + A L+ W YT + Sbjct: 403 ETALQFSERAIAEQHRHAPAHLLRGELLLRMQRPQPA---LKAFWTACRLTRSLEAYTGI 459 Query: 303 LS----------ENTVGKLKRALRLEEINKESVESLVIVSK-IALEMGSIDQAHAKAMLA 351 ++ L A + ++ + +S V+ +AL +QA A Sbjct: 460 ITSYCDLFAIGVNRYKEALATAKSVVKLYPQKAQSFVLFGSVLALSSEHREQARQALQKA 519 Query: 352 MKIAPRK-EIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + PRK LA + + + I + Sbjct: 520 LSMEPRKLSTNFALADLLVEDGNLRGAIDRLQALGERHPRE 560 >gi|254000197|ref|YP_003052260.1| hypothetical protein Msip34_2496 [Methylovorus sp. SIP3-4] gi|253986876|gb|ACT51733.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4] Length = 380 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 14/149 (9%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 AA + A + + ++LL V IAL + A + + A + Sbjct: 23 AAGDDKQATAICQQILAADA-RQPEAIHLLGV-IALQDGNMEKAAQYFQK-----AIKLN 75 Query: 156 A-----VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 +L S G L A+ KA+ + P + + ++ A Sbjct: 76 GKNPQYHSNLGLVSHEQGKLTEAEASYRKAIQLEPRYVDAWYNLHALLIRTGDYLPAREA 135 Query: 211 LNQKKKNAKEWNRNR--AILLIARSLENA 237 L+ K R ++L+ + E Sbjct: 136 LDMVLKLNPHDQEARLMMVILLDYAGEKE 164 >gi|218513248|ref|ZP_03510088.1| putative exported protein, TonB-dependent receptor [Rhizobium etli 8C-3] Length = 334 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 12/121 (9%), Positives = 41/121 (33%), Gaps = 1/121 (0%) Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +L ++ D+ M + + ++ L + +A + + + ++ K+ L Sbjct: 6 QDPLLHANLAMLYLDQSRMKEAKREIDTAIALDPSFDIALLVRGRYYLQSGERDKSLEDL 65 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSKIALEMGSID 342 NP + + ++ L+ ++ + + + A+++ D Sbjct: 66 LAASTANPAHSQSQLMLAAAHYEKGDRIPSQQALDNADRLDNNDPAISAFRTAVDIDDYD 125 Query: 343 Q 343 Sbjct: 126 A 126 >gi|255945219|ref|XP_002563377.1| Pc20g08540 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588112|emb|CAP86183.1| Pc20g08540 [Penicillium chrysogenum Wisconsin 54-1255] Length = 513 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 23/185 (12%), Positives = 58/185 (31%), Gaps = 7/185 (3%) Query: 112 QQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFESCRIG 168 + + L+ + LA+ A + + T + IG Sbjct: 20 ALQIPSDTPISELISSAKAHLAQGSPRDAVVYFDAAVSRDPTNYITIFQRG--AAYLSIG 77 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-KKNAKEWNRNRAI 227 + A + L++ P+ + + W A+ L + KK+ ++ A Sbjct: 78 KNSQASSDFDRVLELKPNFEGALLQRSRLNARSAHWQEALQDLERAGKKSTDDYKELEAA 137 Query: 228 L-LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L +G +A ++ + ++ A + + +A L + Sbjct: 138 RDAATLALNAEKQGAWETCVSEANVAILKANTALPLRQARAHCHFEKGETEEALSDLAHV 197 Query: 287 WKVNP 291 +++P Sbjct: 198 LQMSP 202 >gi|119620977|gb|EAX00572.1| intraflagellar transport 172 homolog (Chlamydomonas), isoform CRA_b [Homo sapiens] Length = 1711 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 29/196 (14%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 +S+ H V+L E ++ A + P ++ + Sbjct: 1093 ELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIR-AGKPKEAVL----MFVHNQ--- 1144 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +AQR A A D P V+ A+ + +K Sbjct: 1145 DWEAAQRVAE-AHD-----PDSVAEVLVGQAR-----GALEEKDFQKAEG---------- 1183 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ R+ + ++L++C + + + + A + + +K +E + Sbjct: 1184 LLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVE 1243 Query: 289 VNPHPEIANIYTHLLS 304 H E A Y+ + Sbjct: 1244 QARHWEQAGEYSRAVD 1259 >gi|88809358|ref|ZP_01124866.1| hypothetical protein WH7805_09409 [Synechococcus sp. WH 7805] gi|88786577|gb|EAR17736.1| hypothetical protein WH7805_09409 [Synechococcus sp. WH 7805] Length = 298 Score = 40.7 bits (94), Expect = 0.59, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 15/196 (7%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + R+G A R A A+ + P+ + + + + + + + A L + K Sbjct: 59 QLLRLGQPEEASRLAALAVRLQPNDERLWSVLAEAQLRSDQLNDAAGSLAKAKSLNP--- 115 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 +A L A + + E L+L + A + + Q+ R+A Sbjct: 116 -GKAGLWFAEASLALRDNRPDDAVPLLDEGLRLDPKNAGAYFDLGNARVMQDDLRQALRA 174 Query: 283 LEKIWKVNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL--- 336 EK + P A NT +KR + +I E ++ ++ AL Sbjct: 175 FEKATSIKPSFWEALNNQALVLFEMGNTSEAIKRWRSVLKIKSN-AEPMLALA-AALNKQ 232 Query: 337 ---EMGSIDQAHAKAM 349 + SI+ A Sbjct: 233 KPGDTESIELARKALA 248 >gi|294085367|ref|YP_003552127.1| thioredoxin [Candidatus Puniceispirillum marinum IMCC1322] gi|292664942|gb|ADE40043.1| thioredoxin [Candidatus Puniceispirillum marinum IMCC1322] Length = 299 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 4/123 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E+ D +A + +A++ P++ V++ + + A +Q + E+ Sbjct: 134 NEAVDQQDFAAAMTHFQQAMEADPESAEALGGVIRCLTGMGDHASARDVADQ---LSDEY 190 Query: 222 NRNRAILLIARSLENADKGDMIA-SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 N+AI+ +L+ A++ A A + ++ A A +L + + A Sbjct: 191 KENKAIITAIAALDLAERAAESAGGLDAARAVVAAEPENLDARQELAMALFAVGENAAAM 250 Query: 281 VIL 283 L Sbjct: 251 EQL 253 >gi|218780057|ref|YP_002431375.1| hypothetical protein Dalk_2214 [Desulfatibacillum alkenivorans AK-01] gi|218761441|gb|ACL03907.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum alkenivorans AK-01] Length = 777 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 57/202 (28%), Gaps = 36/202 (17%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + D +A Y AL ++P + + Y LN+ + E Sbjct: 598 LLAAAGQDKEAA-SYIQAALSLAPRSVDALNNMASIYFKTGSIEAGANQLNRILEIEPEN 656 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R L +L G+ + + + + A A LIS + Sbjct: 657 IEVRRNL----ALLMLKTGNPLGARDQLKTICYISPDDFDAQYLLATVLISLGR------ 706 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 + YTHL L EI E+ ++ + +G Sbjct: 707 -------------LEEAYTHLS-----------KAL-EIKPNHPETHNKMAAVLYNLGYQ 741 Query: 342 DQAHAKAMLAMKIAPRKEIFLL 363 D A A+K P E L Sbjct: 742 DDAIRHLETALKNNPDYENARL 763 >gi|126660968|ref|ZP_01732056.1| MCP methyltransferase, CheR-type [Cyanothece sp. CCY0110] gi|126617746|gb|EAZ88527.1| MCP methyltransferase, CheR-type [Cyanothece sp. CCY0110] Length = 499 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 7/122 (5%) Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + E R +A + LDI+ + + Q Y + AI + + K Sbjct: 352 FIEQER---YQAALEQFQQILDINSNHTDAAYWIAQIYANQGRYQDAILYCERLLKIDSL 408 Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +L + + G + + + + + L NS+ A + + +R+A Sbjct: 409 AIAPHYLL----ARIAEETGKLEEAKYLLKKIIYLDPNSVAAYLDLTHIYTQEGDERRAI 464 Query: 281 VI 282 + Sbjct: 465 KM 466 >gi|120612254|ref|YP_971932.1| hypothetical protein Aave_3607 [Acidovorax citrulli AAC00-1] gi|120590718|gb|ABM34158.1| Tetratricopeptide TPR_2 repeat protein [Acidovorax citrulli AAC00-1] Length = 584 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 16/206 (7%) Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +A+ Q Y A + + A + + + + + A GD + A Sbjct: 156 QAIPQLYGRASDKAAAAAIVEKALADQLQNPATGPLAWTALGRMRLAAGDRKGALEAARN 215 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVG 309 +L A++ + + L+ + AE ++ + P PEI Y L + Sbjct: 216 ALAQEPTLDAAALLSLQ-LVEAGEA-DAEPLVARYMGGKPQPEIRMAYAGVLLNLQRYSE 273 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-------IAPRKE--- 359 + L + E+ ++ + +AL+ + ++ + + PRK Sbjct: 274 AGTQLDLLTREAPDMAEAWLLKATLALQSDRLQESESALEQFERLLQSYPPTDPRKAAMG 333 Query: 360 -IFLLLAQIEQANSHNTDKILYWTQS 384 +LL +QI + + + W Sbjct: 334 QAYLLRSQIAEK-RGDLAQAEAWLGK 358 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 56/205 (27%), Gaps = 16/205 (7%) Query: 103 ARKMHSYVSQQHTFHN-EYLVYLLEVQIALAE-----RQYNIAHEKLEMMLQI----PAT 152 A K + E LL Q A + N + + Sbjct: 343 AEKRGDLAQAEAWLGKIENSSELLAAQTRRASLLARQGKLNEGIALIRRLPARNPVEERQ 402 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + A L ++ + A KA+ ++P + A + + L Sbjct: 403 KLVAEAQLLRDAKQ---YQQAFEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLR 459 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 Q + +++ L + + + + ++L + Sbjct: 460 QIIEKRPDYHHAYNALGYSLA---ERGIRLQEARQLIQKALTYAPRDPFITDSLGWVEFR 516 Query: 273 QNKKRKAEVILEKIWKVNPHPEIAN 297 +A +L + ++ P PEIA Sbjct: 517 LGNHAEAARLLNEAFQRQPDPEIAA 541 Score = 37.2 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 110/326 (33%), Gaps = 42/326 (12%) Query: 91 GLMSIAAHNIPLARKMHSYV-SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G M +AA + A + +Q+ T L+ L V+ A+ + +A Sbjct: 197 GRMRLAAGDRKGALEAARNALAQEPTLDAAALLSLQLVEAGEADAEPLVAR--YMGGKPQ 254 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRY-ATKALDISPDAPWVTEAVVQQYVLA-KEWSRA 207 P R A + R + + +A D++ W+ +A + +E A Sbjct: 255 PEIR-MAYAGVLLNLQRYSEAGTQLDLLTREAPDMA--EAWLLKATLALQSDRLQESESA 311 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSL--ENADKGDMIASYHDAIESLKLCDNSIMASIC 265 + + ++ + +A + A L + A+K +A + ++ + A Sbjct: 312 LEQFERLLQSYPPTDPRKAAMGQAYLLRSQIAEKRGDLAQAEAWLGKIENSSELLAAQTR 371 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 A L Q K + ++ ++ NP KL +L K+ Sbjct: 372 RASLLARQGKLNEGIALIRRLPARNP-------------VEERQKLVAEAQLLRDAKQYQ 418 Query: 326 ESLVIVSKI-ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ--------------- 369 ++ + K A+ G D A+ +AMLA K + LL QI + Sbjct: 419 QAFEVQGKAVAMAPGDYDLAYDQAMLAEKAGDLAGMERLLRQIIEKRPDYHHAYNALGYS 478 Query: 370 -ANSHNT-DKILYWTQSALH-AMPDP 392 A + Q AL A DP Sbjct: 479 LAERGIRLQEARQLIQKALTYAPRDP 504 >gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 756 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 80/235 (34%), Gaps = 25/235 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A+ + + +H + + LL Q A E L+ M + E Sbjct: 373 GKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS--KAGDMAAATEVLKAMATLNVPAEA 430 Query: 156 AVYSLYFESC-RIGDLNSAQRYA------------TKALDISPDAPWVTEAVVQQYVLAK 202 Y + E+ + N A + L++ P +++ Sbjct: 431 GHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS---AYNPIIEYLCNNG 487 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH-DAIESLKLCDNSIM 261 + ++A Q K A+ + R +A +G+ +SY I S + Sbjct: 488 QTAKAEVLFRQLMKRG--VQDQDALNNLIR--GHAKEGNPESSYEILKIMSRRGVPREAN 543 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 A KS +S+ + A+ L+ + + P+ A + + S G+++ A R Sbjct: 544 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFEDGRVQTASR 598 >gi|60417348|emb|CAI59801.1| import receptor subunit TOM34 [Nyctotherus ovalis] Length = 105 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 4/96 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Y +W AI ++ + N ++ R+L + + + D+ ES+K+ Sbjct: 12 NAYAQRGDWKEAIELYSKSIGSNP----NESLAYSNRALAHLKLKNYREAAEDSTESIKI 67 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ A A++ + +KA L+ I V P Sbjct: 68 NPKNLKAYQRRAEACAELGEYKKAYKDLKVILDVEP 103 >gi|27379691|ref|NP_771220.1| hypothetical protein blr4580 [Bradyrhizobium japonicum USDA 110] gi|27352843|dbj|BAC49845.1| blr4580 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 40.7 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 4/176 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R++ + + L +I + A L + + A Y+ Sbjct: 58 RRLAGCSAVLQANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIA 117 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 +GD + A T+A+ + P+ Y+ +++RA+ +Q K +R Sbjct: 118 YDDLGDRDHAIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIK----LDR 173 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 A+ R + G+ + D ++KL N A A+ + ++ +A Sbjct: 174 TFALAYFNRGTAYREHGEADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARA 229 >gi|320102705|ref|YP_004178296.1| tetratricopeptide repeat-containing protein [Isosphaera pallida ATCC 43644] gi|319749987|gb|ADV61747.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida ATCC 43644] Length = 652 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 76/229 (33%), Gaps = 21/229 (9%) Query: 129 IALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 A + P A Y+L R G + A+ +LD++PD Sbjct: 114 ALQDAGLLPRAIDAFTHAHALRPDDPLIA-YNLGNAWLRRGRHDRAEACYRASLDLNPDQ 172 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P + ++ A+ + A ++ R L A + G + + Sbjct: 173 PLAWCNLGTALQEQGQFEAALAAFTEAIDRAPDYADARYNLGNA----LQELGRHVEAET 228 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 +L+L + + A + +L++Q ++ +AE + + + P+ A + L Sbjct: 229 AYRRALELRPDFLEARVNLGNALMAQAREAEAEALHAETLQTR--PDSAEAHNGL----A 282 Query: 308 VGKLKR---------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 + + R + + E+ ++ L +G ++ Sbjct: 283 LSRFNRGWYEGVVEHYRAALRLRPDFPEAHKNLALALLTLGEWEEGFEH 331 >gi|307637945|gb|ADN80395.1| Paralysed flagellar protein [Helicobacter pylori 908] gi|325996549|gb|ADZ51954.1| Paralysed flagella protein [Helicobacter pylori 2018] gi|325998138|gb|ADZ50346.1| Paralysed flagella protein [Helicobacter pylori 2017] Length = 801 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 54/242 (22%) Query: 127 VQIALAERQYNIAHEKLEM-MLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATKALDI 183 + Y A + +L+ +R A L E+ DL+SA +A Sbjct: 276 AKALDENNNYKQAVRYYKRILLEYKNSRYAPLAQMHLAIEAAEASDLSSASMLFKEAFSN 335 Query: 184 SPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + D +E + + + + ++ A +++ ++ ++ +LE Sbjct: 336 AKDKESASEIALNWAEAEINYQNFNNAKYLIDKVVQSNPDY----LSTHSESALELLKLL 391 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 AIE A L++Q+ KA K ++ +Y Sbjct: 392 KKNQMNESAIE--------------IAHLLLNQDDDVKA--------KEQALYDLGALYA 429 Query: 301 HLLSENTVGKLKRALR--LEEIN--KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++K L + ++ E LE S+ +A + L Sbjct: 430 ---------RIKDFKNAHLYNLRYLQDHAE---------LERASVVRARDEKALFSMEGN 471 Query: 357 RK 358 + Sbjct: 472 TQ 473 >gi|281359483|gb|ADA63503.1| type IV pilus assembly protein [Vibrio vulnificus] Length = 244 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 44/185 (23%) Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A L + G MI ++ + ++L + A + A + KAE I +K Sbjct: 43 ALGLGYLENGAMIKAHDNLQQALTHAPDYYRAHLSMAHYYERVGENGKAEDIYQK--SAR 100 Query: 291 PHP-------------------EIAN----------------------IYTHLLSENTVG 309 HP + A+ + L + V Sbjct: 101 QHPKNGNVLNNYGTFLCKKGEYDKADRLFNRAIEQPYYYLIPASYENAAFCALKAGENVK 160 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-EIFLLLAQIE 368 R + + +S++ ++K+ ++ G+ QA + M + + L+ +E Sbjct: 161 AQTYFTRAIDYDPHRPKSILNLAKLEVDAGNYTQARLRLMRFHQSYGLQIPSLKLMIDLE 220 Query: 369 QANSH 373 + Sbjct: 221 DKAGN 225 >gi|260891393|ref|ZP_05902656.1| putative tetratricopeptide repeat-containing domain protein [Leptotrichia hofstadii F0254] gi|260858776|gb|EEX73276.1| putative tetratricopeptide repeat-containing domain protein [Leptotrichia hofstadii F0254] Length = 378 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 14/166 (8%) Query: 124 LLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 +L +IA+ E+ + A + L M + + + ++ + + A+ Y K Sbjct: 205 ILLAEIAINEKNPSQAEKYLLEMNTAAKGKNGQILGMLGTFY--LQQNNPAKAEEYLAKT 262 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + P ++ Y + ++ + + + K+AK NR + Sbjct: 263 VAAEPKNTSAKILLLGIYEVQNNTAK-LNSIYSQLKSAKVTNRQIGTYFGGVGAGALAEK 321 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + + ++ A + + Q KK +A IL++ Sbjct: 322 YLQKAITEDKDNA--------AKVVLGQVYAGQGKKAEAVKILQEA 359 >gi|229163344|ref|ZP_04291296.1| TPR domain protein [Bacillus cereus R309803] gi|228620125|gb|EEK76999.1| TPR domain protein [Bacillus cereus R309803] Length = 222 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD + A + +AL++ + Sbjct: 14 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSDRAILFYKRALELDDKSAA 73 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 74 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208 >gi|256829247|ref|YP_003157975.1| hypothetical protein Dbac_1465 [Desulfomicrobium baculatum DSM 4028] gi|256578423|gb|ACU89559.1| tetratricopeptide domain-containing protein [Desulfomicrobium baculatum DSM 4028] Length = 364 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 21/162 (12%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + M + V + G + Q +A +I P +P Sbjct: 133 GDFLAASRQYRKMGHDLQAAHYLVR-----AATTGTEVTDQGLLAEAREIYPASPEAWLE 187 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA--IE 251 + + + W ++ L+Q + +L+ L+ D G + + A ++ Sbjct: 188 GIMFQISRESWDDVLSLLDQGL---GSVGTHLGFVLLDPLLDFEDSGAPVKAILPAAYLD 244 Query: 252 SL-----KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 +L + A L + + +A K W+ Sbjct: 245 ALLTVIDRHPPELAPLHY-AGCLLRAHGRIEEA-----KTWQ 280 >gi|209551008|ref|YP_002282925.1| hypothetical protein Rleg2_3432 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536764|gb|ACI56699.1| TPR repeat-containing protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 153 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 6/119 (5%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L +I A + V + L V+ + + Y+ A +L + + Sbjct: 11 LCAICAGFSAVTALPAFAVDNMESTDAPDLT---SVRAKIDAKDYDGALAELRGLAEDN- 66 Query: 152 TREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 ++ VY+L + R GD ++ Y TKAL++ PD E + + Y+ E ++A Sbjct: 67 -QQADVYNLMGYTLRKTGDYKTSLTYYTKALELQPDHKAAREYLGELYIETGEMAKAEE 124 >gi|149177451|ref|ZP_01856055.1| hypothetical protein PM8797T_19156 [Planctomyces maris DSM 8797] gi|148843784|gb|EDL58143.1| hypothetical protein PM8797T_19156 [Planctomyces maris DSM 8797] Length = 1668 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 95/322 (29%), Gaps = 50/322 (15%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIP 150 S + A ++ + L Q + ++A+ + ++ Sbjct: 320 SAGSSEKDQAARLLKQARAELQSGRLDSARALAQQASQL----DVAYRLFDDRPELVLDE 375 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 R + G+ SAQ A + + +A + ++++ A Sbjct: 376 IKRAQSGAGSLA---ATGNTGSAQMTAAEGASKEQATELLRQARLDI--KKRDFAGARQK 430 Query: 211 LNQKKKNAKEW----NRNRAILLIA-RSLENADKGDMIASYHDAIES-----LKLCDNSI 260 + Q + + +R +L R + A I ++ +L + Sbjct: 431 VQQVQGMKVSYDLFDDRPELVLAAIDRISDEAATISGIKGLQQNQDAIRPRINRLMEQ-- 488 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 A+ + Q K +A ++ K+ E NI SE+ +KR Sbjct: 489 ------AQVALQQGNKDEALMLASSAQKLA---ETLNIEFASTSESPSAFIKRVGTSSAS 539 Query: 321 ------------NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF-----LL 363 N E LV ++ L G I+ A KA A ++ +F + Sbjct: 540 KFNPGNTASEKNNPEYARKLVAAARNDLAQGRIEDARQKAEAAQQVDTAYSLFEDRPEQV 599 Query: 364 LAQIEQANSHNTDKILYWTQSA 385 LA I +A Sbjct: 600 LADIRNMAGQPGGLSQEQLYAA 621 >gi|307718491|ref|YP_003874023.1| TPR domain-containing protein [Spirochaeta thermophila DSM 6192] gi|306532216|gb|ADN01750.1| TPR domain protein [Spirochaeta thermophila DSM 6192] Length = 382 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 5/157 (3%) Query: 130 ALAERQY-NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL ++ A + E +L++ +A+ L + G+ + A Y + L P Sbjct: 39 ALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNN 98 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + Y + + AI + K ++ +L + G+ S Sbjct: 99 YALFGLADCYKAQERYREAIEIWEKYLK----YDETNVTVLTRVADAYRKTGNFKRSKEL 154 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++ L+L + + A I R A E Sbjct: 155 YLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEA 191 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 90/270 (33%), Gaps = 24/270 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + + + +N L L A+ +Y A E E L+ T + Sbjct: 78 GEHDRAVSYYRECLRYYPGNNYALFGL--ADCYKAQERYREAIEIWEKYLKYDETNVTVL 135 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + G+ ++ K L++ P+ + + K++ AI++ + Sbjct: 136 TRVADAYRKTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILER 195 Query: 218 AKEWNRNRAILLIA---RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ R + I R L+ ++G +++L+ ++ A A Sbjct: 196 DRDRVDIRVLTAIGNCHRKLKQYERGIPYF-----LKALEKDPHNFYALFGLADCYRGVG 250 Query: 275 KKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 R++ E+I + +PH ++ + Y HL L RA Sbjct: 251 DHRRSLQYWERILEKDPHNKVILTRTGDAYRHLGD------LARAEEYYHQALNIEFDSY 304 Query: 330 IVSKIAL---EMGSIDQAHAKAMLAMKIAP 356 + +A+ +A +++ P Sbjct: 305 AILGLAMVHKARKEYREAAESLNTILRLDP 334 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 5/152 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +QY L+ +A++ L +GD + +Y + L+ P + Sbjct: 216 KQYERGIPYFLKALEKDPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVILTR 275 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Y + +RA + +Q + + ++ ++ + + + + L Sbjct: 276 TGDAYRHLGDLARAEEYYHQALNIEFD-----SYAILGLAMVHKARKEYREAAESLNTIL 330 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L + I A + N+K +A +L++ Sbjct: 331 RLDPENPKIYIELADCYLHLNQKEEARSVLKE 362 >gi|289663471|ref|ZP_06485052.1| putative secreted protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 551 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L A+ Sbjct: 302 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 361 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 362 ATADDDARRDAYVLEAELHQRANDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 417 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 418 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 477 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 478 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 533 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 534 RLDPDNRAL 542 >gi|218437922|ref|YP_002376251.1| hypothetical protein PCC7424_0927 [Cyanothece sp. PCC 7424] gi|218170650|gb|ACK69383.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424] Length = 291 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 19/205 (9%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + R +A A + ++P + Y+ +E + I LN+ Sbjct: 52 IQLVRFQQPEAALSRAKLSTQLAPGHFQTWFILGTLYLQQEEVDQGIEALNRAL----TL 107 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC-AAKSLISQNKKRKAE 280 + KG+ + + + LKL + A++ S +K +A Sbjct: 108 EPKEPGIFFTLGSAYFQKGEYQTAISEIQKGLKLKPD-TPAALFDLGNSYYKLDKHSQAI 166 Query: 281 VILEKI-------WKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 EK W P + NI LK I+KE E + ++ Sbjct: 167 SSYEKAISLDKEFW-----PALNNIGLIKYEQGKMAEALKYWQSALTIDKEQAEPKLAIA 221 Query: 333 KIALEMGSIDQAHAKAMLAMKIAPR 357 G + A A+ + R Sbjct: 222 VATYAQGQTQEGLKLAESALLLDSR 246 >gi|118479553|ref|YP_896704.1| TPR repeat-containing protein [Bacillus thuringiensis str. Al Hakam] gi|118418778|gb|ABK87197.1| TPR-repeat-containing protein [Bacillus thuringiensis str. Al Hakam] Length = 222 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 14 YMQEGNWEEAAKNFTEAIEKNPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 74 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208 >gi|219849523|ref|YP_002463956.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus aggregans DSM 9485] gi|219543782|gb|ACL25520.1| MCP methyltransferase, CheR-type with Tpr repeats [Chloroflexus aggregans DSM 9485] Length = 383 Score = 40.7 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQIEQANS 372 S E + ++ A + G D A A ++I P + LLAQI + + Sbjct: 251 SPEERLRQARAAADHGDWDAAQAYVQQVLEINPLYAPAYYLLAQIAEHHG 300 >gi|327270580|ref|XP_003220067.1| PREDICTED: crooked neck-like protein 1-like [Anolis carolinensis] Length = 694 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ + + + + W R + + Sbjct: 328 EEEVKANPHNYDAWFDYLRLVESDADPDAVREVYERAIANVPPIQEKRHWKRYIYLWINY 387 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + ++L + A+ I Q + A L Sbjct: 388 ALYEELEAKDPERTRQVYQACIELIPHKKFTFAKIWLLYAQFEIRQKSLQLARRALGTSI 447 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ Y L E + K + E E+ S + +++ +G ID+A Sbjct: 448 GKCPKNKLFKGYIELELQLREFDRCR-KLYEKFLEFAPENCTSWIKFAELETILGDIDRA 506 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 507 RAIYELAI 514 >gi|302545304|ref|ZP_07297646.1| LuxR-family transcriptional regulator [Streptomyces hygroscopicus ATCC 53653] gi|302462922|gb|EFL26015.1| LuxR-family transcriptional regulator [Streptomyces himastatinicus ATCC 53653] Length = 947 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 64/205 (31%), Gaps = 24/205 (11%) Query: 164 SCRIGDLNSAQRYATKALDISPD------APWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R GDL A A AL P + A++Q A+ L Q + Sbjct: 628 ALRQGDLQVAAHQARSALAQIPAPGWGVGLGLLLSALIQAETGMGHHDEAMALLEQPLPD 687 Query: 218 AKE-------WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + R R +A +A GD A A + AA++ Sbjct: 688 GLFRTVPGMYYLRARGRCHLATGRYHAALGDFQACGELAESWRMDTPLLAPWRLDAAEAW 747 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE-----NTVGKLKRALRLEEINKESV 325 ++ +A + E+ + L +L+R L + E + Sbjct: 748 LALGNPAQARSLAEEQLRR------GAGEARLRGGLLVVLARTDQLRRRLPRLKEAVEVL 801 Query: 326 ESLVIVSKIALEMGSIDQAHAKAML 350 E ++A+ +G + +A+ Sbjct: 802 EGGDDRIQLAIALGELGRAYRALGD 826 >gi|296446847|ref|ZP_06888784.1| cytochrome C family protein [Methylosinus trichosporium OB3b] gi|296255618|gb|EFH02708.1| cytochrome C family protein [Methylosinus trichosporium OB3b] Length = 650 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 13/124 (10%) Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A+ + R + A++G + + +L+L A + A L S+ + Sbjct: 526 AAELVSAERPETHLGVGALRAEQGRPLEAIAAFETALRLDPKFTPARLDLADLLRSEGRD 585 Query: 277 RKAEVILEKIWKVNP-----HPEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESLVI 330 +AE L + + +P H +A E +L RA+ L + Sbjct: 586 AEAEAPLREAVRRDPADAVAHYALALWLLRQSREMEARSELARAVTLA---PDDP----A 638 Query: 331 VSKI 334 +++ Sbjct: 639 IARA 642 >gi|257464684|ref|ZP_05629055.1| tetratricopeptide repeat protein [Actinobacillus minor 202] gi|257450344|gb|EEV24387.1| tetratricopeptide repeat protein [Actinobacillus minor 202] Length = 397 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 42/194 (21%) Query: 98 HNIPLARKMHSYVSQ--QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + A ++H + ++ + L + +A Y+ A ++L P Sbjct: 91 GEVDRALRIHQALDSSPDYSIEQKLLAKQQLAKDFMAAGFYDRAENYYILLLDEPE---- 146 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 ++ +++ Y KEW +AI + Sbjct: 147 -------------------------FAVN-----SLSQLMEIYQKTKEWKKAINVSEKLL 176 Query: 216 KNAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 K A E +R A++++N D+ ++ A+E AS+ + Sbjct: 177 KIAPETDRIPLAHYYCEYAQAVKNEDQNAFLSLLEKALE---HFPQCARASMMLGDYHLE 233 Query: 273 QNKKRKAEVILEKI 286 + R A EK+ Sbjct: 234 NQRFRTAADYYEKV 247 >gi|288941666|ref|YP_003443906.1| type 11 methyltransferase [Allochromatium vinosum DSM 180] gi|288897038|gb|ADC62874.1| Methyltransferase type 11 [Allochromatium vinosum DSM 180] Length = 798 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 73/244 (29%), Gaps = 27/244 (11%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFES------CRIGDLNSAQ----------RYAT 178 + + +R + ++ + D A A Sbjct: 25 DRQTIGNAMHKKTRSSGSRASGGHGIHRTAPLSTPSLAEQDALVALFNAGRLSEGETMAR 84 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + P A + +A+ + A+ L Q E N + L + D Sbjct: 85 DVIRRYPKAVFGWKALGTVLLAGDRQREALPALQQAL----ELNPRDSECLNSLGKTLQD 140 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HP 293 + A+ +L+L + A I L+ + +A V L++ + P H Sbjct: 141 LVQLDAALDAIEHALRLRPDYGSALINRGNVLVQLGRPDEALVCLDRALALQPDSASAHN 200 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + + L + L + E+ + + ++G +++ A+ A+ Sbjct: 201 DRGHALKALGRLDEA--LAAYTHAIALKPGFAEAHHNLGSVLRDLGRFEESLAQYGRALD 258 Query: 354 IAPR 357 + P Sbjct: 259 LKPD 262 >gi|210617786|ref|ZP_03291757.1| hypothetical protein CLONEX_03981 [Clostridium nexile DSM 1787] gi|210149149|gb|EEA80158.1| hypothetical protein CLONEX_03981 [Clostridium nexile DSM 1787] Length = 440 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + +A E+ + Q T E S+ + I D A R + + +P Sbjct: 320 AEAYEKTGKEELALEQYRKVSQWNQTEEL-YRSMVRIAQNI-DEQEALRLCEEGIAANPK 377 Query: 187 APWVTEAVVQQYVLA 201 + + ++Q Sbjct: 378 SKELRIQLIQIQCKD 392 >gi|118579511|ref|YP_900761.1| hypothetical protein Ppro_1078 [Pelobacter propionicus DSM 2379] gi|118502221|gb|ABK98703.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379] Length = 423 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 97/331 (29%), Gaps = 42/331 (12%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPF--------VILSILYFFL 52 M+ ++R+F ++ +V +S D + G+ + + LS + Sbjct: 1 MINILRFFVLMLVVSLLCGFLSGAGGDERLRRGDEYLQARQWEEAIDEYRAALSERPEWP 60 Query: 53 FAWILLFAVSRFFLSCPAMLFHMLHKRN--YDKGYKALYTGLMSIAAHNIPLARKMHSYV 110 A L + +G G++ + A + Sbjct: 61 AALERLADALMAAGKDGEAISTYERLLRLDESRGSVRYTLGVLHERGGRLKEAESQYREC 120 Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 +Q +++ +L I + +A ++ ++ + L + Sbjct: 121 LRQEPDNDDARRHL--ADIYVLRGNLTLATKEYRQLITRQPANPLFYFRLARVLKKNRRY 178 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITFLNQKKKNAKEWNRNRA 226 A + +A++++P + + + Y A L ++ + N + Sbjct: 179 GEAIKEYRRAIELAPHNAELRRELAELYCKRGMGDGAIGQYRELLRLDNRDTEARNSLIS 238 Query: 227 I---LLIARSLENA---------DKGDM--------------IASYHDAIESLKLCDNSI 260 + L +L D D A+ + ++L L ++ Sbjct: 239 LYVKLHRYGALRQLLQEGVERFPDDPDSHFRMGLMHDFAREYQAAISEYRKALALKNDHA 298 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A K + K KA+ L K +P Sbjct: 299 RALKGLGKIYLKLGKTTKAKECLVAARKADP 329 >gi|116624565|ref|YP_826721.1| peptidase M56, BlaR1 [Candidatus Solibacter usitatus Ellin6076] gi|116227727|gb|ABJ86436.1| peptidase M56, BlaR1 [Candidatus Solibacter usitatus Ellin6076] Length = 733 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 14/188 (7%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 R G A + + + P + ++ Y+ + A Q K + Sbjct: 340 LRSGVNELALQKYMEGVAADPAHRATLQKRCIEAYMRMGRKAEAADVNAQLLKE----HP 395 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + L + D+G++ A+ + L+ ++ +A ++ I+Q A + Sbjct: 396 HDTDGLAFGATILLDQGNVAAAIAQLQQVLERAPDNPVAHFDLGRAYIAQGDLMAARREI 455 Query: 284 EKIWKVNPHPEIANIYTHLL-------SENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 E+ + P+ L + +L R E ++ L + A+ Sbjct: 456 EEAIALR--PDFTRARQALERLSPGAGGDANEDELARLQSESAKAPERLDLLQSLGTAAV 513 Query: 337 EMGSIDQA 344 G D A Sbjct: 514 RAGKFDLA 521 Score = 38.4 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 32/188 (17%) Query: 83 KGYKALYTGLMSIAAH----NIPLARKMHSYVSQQHTFHNEYLVYLLE--VQIALAERQY 136 + +AL +S A LAR LL+ A+ ++ Sbjct: 467 RARQALER--LSPGAGGDANEDELARLQSESAKAPERLD------LLQSLGTAAVRAGKF 518 Query: 137 NIAHEKLEMMLQIPATRE-FAVYSLYFESC-----RIGDLNSAQRYATKALDISPDAPWV 190 ++A + +L TRE + + R GD +A KA +++P V Sbjct: 519 DLAIYAYQKLL--DRTREPSELRGELYLKLGDAYVRKGDSAAALDAMQKARELAPGNRLV 576 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ A + A + + E + L D +A+ + Sbjct: 577 LGPLLTLLDGAGRHAEA-----NQLRAGIE-----TVAAHQAELTTQFLNDEVAAAEQRL 626 Query: 251 ESLKLCDN 258 L+L + Sbjct: 627 AKLRLQPS 634 Score = 38.0 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 13/114 (11%), Positives = 42/114 (36%), Gaps = 4/114 (3%) Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH---LLSENTVGKLKRALRLEEINKES 324 ++ + +K +A + ++ K +PH + L N + + ++ E ++ Sbjct: 372 EAYMRMGRKAEAADVNAQLLKEHPHDTDGLAFGATILLDQGNVAAAIAQLQQVLERAPDN 431 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK 377 + + + + G + A + A+ + P L ++ + ++ Sbjct: 432 PVAHFDLGRAYIAQGDLMAARREIEEAIALRPDFTRARQALERLSPGAGGDANE 485 >gi|70990982|ref|XP_750340.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293] gi|66847972|gb|EAL88302.1| DnaJ and TPR domain protein [Aspergillus fumigatus Af293] gi|159130814|gb|EDP55927.1| DnaJ and TPR domain protein [Aspergillus fumigatus A1163] Length = 693 Score = 40.7 bits (94), Expect = 0.62, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 61/183 (33%), Gaps = 22/183 (12%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 +S + + ++ + + A + L+M L + Sbjct: 373 AISMLRENNQDPDALMIRARAYYGLGESEQALKTLKMCLGLDP----------------- 415 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ A + ++ A AK++ +AI ++ + + + + Sbjct: 416 DMKPAIKMLRTVQKLTRTKEEGNNAF-----KAKDYRKAIELWSEALEVDPQNKDMNSKI 470 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L R+ + + + +D E+LKL + + A AK+ +A + + + Sbjct: 471 LQNRAQAYINLKEYENAINDCNEALKLDPSYVKAQKMRAKAYGGAGNWEEAIRDYKAVAE 530 Query: 289 VNP 291 NP Sbjct: 531 ANP 533 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 ++RAI + + +I L R+ + + DA +L+L ++ Sbjct: 211 KDGNYNRAIEEFTKAIEINPSS----SIYLSNRAAAYLSANRYLEALEDAERALELDPDN 266 Query: 260 IMASICAAKSLISQNKKRKAEVIL 283 A+ L + + +A +L Sbjct: 267 SKIMYRLARILTALGRPSEALEVL 290 >gi|329663840|ref|NP_001192326.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Bos taurus] Length = 1173 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 99/304 (32%), Gaps = 39/304 (12%) Query: 91 GLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLE----VQIALAERQYNIAH 140 G + N+ A+K + +H H + + ++ A +++ A Sbjct: 458 GALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAE 517 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 + + +L+ L + G+ A + +AL I+ D P + ++ Sbjct: 518 KLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLA 577 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIA------RSLENADKGDMIASYHDAIESLK 254 +EW + K + ++L + D+ A+ K Sbjct: 578 KQEWGPGQKKFERILKQPATQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYK 637 Query: 255 -----LCDNSIMA----SICAAKSLISQNK-----KRKAEVILEKIWKVNPHPEIANIYT 300 N A ++ A K + + R+A + +W +A+IY Sbjct: 638 QVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLN-----LAHIYV 692 Query: 301 HLLSENTVGKL--KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + ++ + + ++ E ++ +++ + G + + + A +AP Sbjct: 693 EQKQYISAVQMYENCLRKFYKH--QNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSD 750 Query: 359 EIFL 362 + + Sbjct: 751 TVLM 754 >gi|308272672|emb|CBX29276.1| hypothetical protein N47_J02570 [uncultured Desulfobacterium sp.] Length = 234 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 43/168 (25%), Gaps = 19/168 (11%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A +AL PD + + AI + + A+ Sbjct: 76 EEAINKFKEALIDKPDFVEAWYGWGIALENSGQHEEAIEKFEKAVTYKPNY----AVAWY 131 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 L + G + +++ + A C +L K+ +A EK Sbjct: 132 GWGLVLENSGKREEAIEKFDKAVACRPDFAEAWYCWGAALEKSGKREEAIEKFEKAVTYK 191 Query: 291 PHPEIANIYTHLL---------SENTVGKLKRALRLEEINKESVESLV 329 P+ Y S +++ + E+ + Sbjct: 192 PN------YAEARCNWGAALEKSGKHEEAIEKFKEATKYKPNYAEARL 233 >gi|294941015|ref|XP_002782970.1| serine/threonine protein phosphatase PfPP5, putative [Perkinsus marinus ATCC 50983] gi|239895152|gb|EER14766.1| serine/threonine protein phosphatase PfPP5, putative [Perkinsus marinus ATCC 50983] Length = 335 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 16/203 (7%) Query: 98 HNIPLARK--MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 ++ LA++ M+ + +F Y+ + +++ A E + L R Sbjct: 65 GDV-LAKRYEMNDALKGGASFEKCAKTYVRMATCYVRMNKFDDAIEMYQKALTEDNNRHT 123 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + E + + +Y +A I+P+ + A +++ A ++ Sbjct: 124 --RTALNECKHMKE-----KYEREAY-INPELADEHRVKGNECFKAADYAGAKKEYDEAI 175 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K + A L R+ + D E LKL + A Sbjct: 176 KRNP----SDAKLYSNRAAALTKLMAYPDALRDLDECLKLDPKFVKAYSRKGTVHFMMKD 231 Query: 276 KRKAEVILEKIWKVNP-HPEIAN 297 +KA EK +++P H E+ + Sbjct: 232 YKKALEDYEKGLEIDPSHKELLD 254 >gi|226314849|ref|YP_002774745.1| hypothetical protein BBR47_52640 [Brevibacillus brevis NBRC 100599] gi|226097799|dbj|BAH46241.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 547 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 8/181 (4%) Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 L+ ++ + R+ + ++G + + E ++ + A + + Sbjct: 139 LDMPPRHFLPSEKEDVYSKHERARRSLEEGRFLEALDTLKEIVEADPEFLPAWNNLSLAY 198 Query: 271 ISQNKKRKAEVILEKIWKV---NPHP--EIANIYTHLLSENTVGKLKRALRLEEINKESV 325 + KA +E+ N H +A + +H TV L L+++ Sbjct: 199 YYAGEFEKAMETIEQTLDKEEGNLHALCNLAVLLSH--HNQTVELLSLIDTLKKVVPFHP 256 Query: 326 ESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384 E+ ++ +G D+A+ ++ E A I S D+ L W Q Sbjct: 257 ENTYKLATTMGVLGQHDEAYFHYQRMLRNGRPHEACTYHYAAISAYLSGKKDQALRWWQK 316 Query: 385 A 385 A Sbjct: 317 A 317 >gi|221199988|ref|ZP_03573031.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2M] gi|221206857|ref|ZP_03579869.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2] gi|221211196|ref|ZP_03584175.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD1] gi|221168557|gb|EEE01025.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD1] gi|221173512|gb|EEE05947.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2] gi|221180227|gb|EEE12631.1| tetratricopeptide repeat protein [Burkholderia multivorans CGD2M] Length = 607 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 16/181 (8%) Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 K+ + + NR +A + + D + +L++ + + A++ L Sbjct: 204 LKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRRALQIRPDYLPAALM----LSQMG 259 Query: 275 KKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 +A I V +P+ +A +L + K+ + +++ + L+ Sbjct: 260 PAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLM 319 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQ 383 ++ I ++ +D A A +++ ++ + ++ LAQI N + W Sbjct: 320 ALALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYLAQI-AIEQGNEAQASQWLD 378 Query: 384 S 384 Sbjct: 379 K 379 >gi|206890228|ref|YP_002249703.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742166|gb|ACI21223.1| tetratricopeptide repeat domain protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 1056 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 55/186 (29%), Gaps = 26/186 (13%) Query: 118 NEYLVYLLE--VQIALAERQYNIAHEKLEMMLQ--IPATRE------FAVYSLYFESCRI 167 + L +L + AL+ +Y A L+ E ++ L + Sbjct: 142 KDSLTIVLHELGKAALSLGKYEKALSSFNESLKLYREKGDENSVGANLSLIGLVYSKM-- 199 Query: 168 GDLNSAQRYATKALDISPDA--PWVTEAVV----QQYVLAKEWSRAITFLNQK--KKNAK 219 G L A Y +AL I+ P T V+ Y + RAI++ + + Sbjct: 200 GQLKKALSYFEEALKIAKKHNDPEGTSIVLREIADIYSDLYQRDRAISYYQEAIEIQKKN 259 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD---NSIMASIC---AAKSLISQ 273 + + L D + E+LK+ + + Sbjct: 260 NLRKELGVTLNNLGSMYMDLAQYEKALQSYQEALKIAKEQNDLPTTATLFNNIGHVYAKF 319 Query: 274 NKKRKA 279 + KA Sbjct: 320 GRTDKA 325 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 26/176 (14%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDA---PWVTEAVVQ----QYVLAKEWSRAITFL 211 L +GD N A Y KA+D++ W+ + + Y + ++ +A +L Sbjct: 70 GLGSSYEDMGDENKALFYYEKAIDVARKLGNKEWLADDLFLAGSIYYRKSLDYEKAFAYL 129 Query: 212 NQKKKNAKEWNRNRAILLIARSLENAD--KGDMIASYHDAIESLKL-----CDNSIMASI 264 + +K E ++ ++ L A G + ESLKL +NS+ A++ Sbjct: 130 EESRKLFTEIGAKDSLTIVLHELGKAALSLGKYEKALSSFNESLKLYREKGDENSVGANL 189 Query: 265 -CAAKSLISQNKKRKAEVILEKIWKVN-PH----------PEIANIYTHLLSENTV 308 + +KA E+ K+ H EIA+IY+ L + Sbjct: 190 SLIGLVYSKMGQLKKALSYFEEALKIAKKHNDPEGTSIVLREIADIYSDLYQRDRA 245 >gi|167909465|ref|ZP_02496556.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 112] Length = 581 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 26 DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 85 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP + + VL + + A L Sbjct: 86 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 142 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 +Q+ A NR +AI+ + A + + Sbjct: 143 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 202 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L++ + + A++ L +A I V +P+ Sbjct: 203 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 258 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 259 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 318 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 A +K + ++ LAQI + +N W A Sbjct: 319 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 358 >gi|167718020|ref|ZP_02401256.1| tetratricopeptide repeat protein [Burkholderia pseudomallei DM98] Length = 579 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 24 DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 83 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP + + VL + + A L Sbjct: 84 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 140 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 +Q+ A NR +AI+ + A + + Sbjct: 141 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 200 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L++ + + A++ L +A I V +P+ Sbjct: 201 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDSR 256 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 257 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 316 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 A +K + ++ LAQI + +N W A Sbjct: 317 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 356 >gi|119620980|gb|EAX00575.1| intraflagellar transport 172 homolog (Chlamydomonas), isoform CRA_e [Homo sapiens] Length = 1711 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 29/196 (14%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 +S+ H V+L E ++ A + P ++ + Sbjct: 1109 ELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIR-AGKPKEAVL----MFVHNQ--- 1160 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +AQR A A D P V+ A+ + +K Sbjct: 1161 DWEAAQRVAE-AHD-----PDSVAEVLVGQAR-----GALEEKDFQKAEG---------- 1199 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ R+ + ++L++C + + + + A + + +K +E + Sbjct: 1200 LLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVE 1259 Query: 289 VNPHPEIANIYTHLLS 304 H E A Y+ + Sbjct: 1260 QARHWEQAGEYSRAVD 1275 >gi|12711633|gb|AAK01925.1|AF318303_1 CGI-201 protein, type II [Homo sapiens] Length = 848 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 660 RAIYELAI 667 >gi|114321630|ref|YP_743313.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1] gi|114228024|gb|ABI57823.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1] Length = 500 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 7/147 (4%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPW--VTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + GD A + + + A + + +++ A L++ + + Sbjct: 298 QQVLAQGDAREAVQRFRARAEQTRGAEQIAARYGLALALIRDRQFDEAEALLSKLEADL- 356 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + L+AR GD + ++ +L + A A +L+ + +A Sbjct: 357 ---SGQPAWLLARGRLQQRSGDPAQAAATLRKAQELFPGNRAAPTYLADALLDAGQPNEA 413 Query: 280 EVILEKIWKVNP-HPEIANIYTHLLSE 305 +L + + +P HPE+ +E Sbjct: 414 RQVLTRAVRDHPNHPELKRRLAEAANE 440 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 7/144 (4%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + A+ + + + + A +A +L + D + +E+ + Sbjct: 302 AQGDAREAVQRFRARAEQTRGAEQIAARYGLALALIRDRQFDEAEALLSKLEA---DLSG 358 Query: 260 IMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLE 318 A + A + +A L K ++ P A Y + + L Sbjct: 359 QPAWLLARGRLQQRSGDPAQAAATLRKAQELFPGNRAAPTYLADALLDAGQPNEARQVLT 418 Query: 319 EI---NKESVESLVIVSKIALEMG 339 + E +++ A E G Sbjct: 419 RAVRDHPNHPELKRRLAEAANEAG 442 >gi|325180925|emb|CCA15335.1| DNA polymerase epsilon subunit putative [Albugo laibachii Nc14] Length = 447 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 39/155 (25%), Gaps = 39/155 (25%) Query: 87 ALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 A + +I AR +S++ N + A + A E + Sbjct: 15 AASQAFAPLHIQDIADARNRLG-ISKELLPENRAKRLHVGALAATLNGKLQEAAALYESI 73 Query: 147 LQIPATREFAVYSLYFESCRIGDL------------------------------------ 170 L A+ Y ++GD Sbjct: 74 LAHDPLDLLALRCSYDVYLKLGDARNVLGTIARRAPFWSPQIPGYSLLLSMQAFGLHLCG 133 Query: 171 --NSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + A+ A KAL ++ + W ++Q Sbjct: 134 KMDEAEVLAEKALALNGNDRWAFFTLLQVLETRGN 168 >gi|330940627|ref|XP_003305973.1| hypothetical protein PTT_18968 [Pyrenophora teres f. teres 0-1] gi|311316779|gb|EFQ85945.1| hypothetical protein PTT_18968 [Pyrenophora teres f. teres 0-1] Length = 598 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 45/266 (16%), Positives = 91/266 (34%), Gaps = 53/266 (19%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ L +A+ ER IA ++ +L T + R SA A +A Sbjct: 210 LIRSLLHHLAIVERPTPIAMQRFLSILDDMKTA-------HIHIIRSE-WTSAIHLAGRA 261 Query: 181 LD-------ISPDAPW--------------VTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + S W + V A +S A +F+ + + Sbjct: 262 MGKVGSDELQSALHIWRDMEHRAAIKGRDVTFNVLFNVAVKAGRYSLAESFMKEMQARRL 321 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 R + L+ + + +Y + I + ++ D ++ ++ A SLI + A Sbjct: 322 PMFRYWRVTLLYYYGVLQNGNGVRKAYQELIAAGEIVDTVVLNAVIA--SLIRAGEPSAA 379 Query: 280 EVILEK-----IWKVNPHP-------------EIANIYTH----LLSENTVGKLKRALRL 317 E + E+ +++P P + ++ L+ E +LKR Sbjct: 380 EHVFERMKRLHATRISPAPGHRFLNRNWRDRRALGLLFRDESRRLVREGRDDELKRLQDF 439 Query: 318 EEINKESVESLVIVSKIALEMGSIDQ 343 + +S +++ A G+ID+ Sbjct: 440 APVAPDSRTYGILMRYYATTAGNIDR 465 >gi|301059725|ref|ZP_07200622.1| YcaO-like protein [delta proteobacterium NaphS2] gi|300446172|gb|EFK10040.1| YcaO-like protein [delta proteobacterium NaphS2] Length = 576 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 20/135 (14%) Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA--VVQQYVLA-KEWSRAITF 210 + + +GD +A + +AL + P A V + + +++ +AIT Sbjct: 430 FLGLAHI-----SLGDPQTAMLFLEEALKLDPKAEDVPSIYCYMGICLRDMEQYRKAITV 484 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC----A 266 L + +R R + + + AIE+ AS Sbjct: 485 LEK----GARVDRERTDIHNLMGFCYFK----LKEHEKAIEAFHKVLELDPASAIDYANI 536 Query: 267 AKSLISQNKKRKAEV 281 A + K A Sbjct: 537 ASNYRDMGNKEMAIR 551 >gi|291567438|dbj|BAI89710.1| TPR domain protein [Arthrospira platensis NIES-39] Length = 260 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 15/190 (7%) Query: 153 REFAVYSLYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAV-VQQYVLAKEWSRAI 208 + A+ L+ ++ D ++A + A +AL + PD + + + E + A Sbjct: 6 KFLALQ-LHQQAIIYINNRDWDAAIKAAEQALKLYPDLAIACKTLGIAWQC-KGELAEAE 63 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + Q K + + L + ++ + + +LK+ N A AK Sbjct: 64 KWYKQALKIQPHFAEVYSNLGSLYAKQSQWEP----AIIAYQTALKINPNLAGAYRNLAK 119 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----LKRALRLEEINKE 323 K K+ P A+ Y L + + + + ++ + Sbjct: 120 VWTELEDTDNFIKCQYKALKLEPEKGSADDYIKLGNLLLKSRQFTKAIACYRQAIKLYPD 179 Query: 324 SVESLVIVSK 333 + E+ + + Sbjct: 180 TSEAYHNLGE 189 >gi|284097303|ref|ZP_06385439.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3] gi|283831177|gb|EFC35151.1| hypothetical protein POR_0026 [Candidatus Poribacteria sp. WGA-A3] Length = 637 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 14/149 (9%) Query: 129 IALAERQYNIAHEKLEMMLQ-IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPD 186 + +++ +L+ P D + A K L+ P Sbjct: 154 AYDKKGDHDLTIADYTKVLELDPDNMFAYHNRG--RAYINKNDHDKAIEDFNKILEQDPA 211 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA-- 244 + V Y L ++ +AI + + + A + R D+GD Sbjct: 212 NAEIYLYRVLAYSLKGDYDKAIADCTKTLEFKPNY----ANAHLCRGFAYIDQGDQEKFL 267 Query: 245 -SYHDAIESLKLCDNS---IMASICAAKS 269 ++ D +++ + + A A + Sbjct: 268 DAFKDFVKANEYDQALKTEVPAIYVAGQI 296 >gi|294909633|ref|XP_002777813.1| hypothetical protein, conserved [Perkinsus marinus ATCC 50983] gi|239885775|gb|EER09608.1| hypothetical protein, conserved [Perkinsus marinus ATCC 50983] Length = 386 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 6/133 (4%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + A AI E + AI+ R+ + I DA ++L L Sbjct: 99 QMKAGLLDGAIKAYTNALSVHCEDPKLDAIVHSNRAQAYLKQKKYIQCISDAQQALSLDP 158 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRA-L 315 + A+ A + + +A K +P +++ + + E + +R Sbjct: 159 TQVKAAYRGAVACMELQLFARAAKFARSGLKTDPDSKDLSKVMGQAIDELKKSRERREKE 218 Query: 316 RLEEINKESVESL 328 +L+ + E+ Sbjct: 219 KLD----DHGETA 227 >gi|218701061|ref|YP_002408690.1| hypothetical protein ECIAI39_2752 [Escherichia coli IAI39] gi|218371047|emb|CAR18874.1| conserved hypothetical protein [Escherichia coli IAI39] Length = 1093 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|75910999|ref|YP_325295.1| hypothetical protein Ava_4803 [Anabaena variabilis ATCC 29413] gi|75704724|gb|ABA24400.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413] Length = 340 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 4/158 (2%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 + + A L I R A Y+L G L A A+++ P Sbjct: 98 ALQQQGKKEGAITAYRQALVIDPRRVEAYYNLGLVLYEQGLLQEAIAAYQDAINLEPSKV 157 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + K + A A +G + Sbjct: 158 NAHHNLAIALQQTGKMEEAIVAYREVLK----LDPQNAAAYSNLGSLMAMQGRPEEAIAA 213 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 ++++ + +A +L +Q +KA ++ Sbjct: 214 YTQAVRQDPKNALAYYNLGITLYNQGDLQKASNAFKRA 251 >gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099] gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099] Length = 551 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 95/312 (30%), Gaps = 25/312 (8%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKL-EMMLQ 148 GL+ + A + Y + + + L + + A E + Sbjct: 237 RGLIWSRKGDDSRA--IADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRL 294 Query: 149 IPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 P E R GD + A ++ + + P E+ RA Sbjct: 295 DPKMAAAYYDRG--TEWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERA 352 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 + LN+ + +A + R++ A KGD + D +++ L N A Sbjct: 353 LADLNRAI----GLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRG 408 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL---LSENTVGKLKRALRLEEINKES 324 KAE K + P I+ + S T + +L+ + Sbjct: 409 FVNFYSGMLAKAEPDFAKAAALAPDNAYLAIWLDIIDRRSGGTSHLREAIAKLDMSKWPA 468 Query: 325 VESLVIV-----SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 +++ ++ + G+ D A + + A++++ + N + + Sbjct: 469 PVIKMLLGQKTSAETLADAGTGDSAQTSGQVCE-----ANFYT--AELDRLQARNEEAVR 521 Query: 380 YWTQSALHAMPD 391 + +A Sbjct: 522 LYRLAARTCPKG 533 >gi|46201347|ref|ZP_00055208.2| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1] Length = 575 Score = 40.7 bits (94), Expect = 0.63, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 60/207 (28%), Gaps = 12/207 (5%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L R+G L+ A+ A +A++++P A+ +++ A L + K Sbjct: 26 LAVMRVRLGALDGAKAVAERAVELAPGLAEAHAALGLVLSKTRQFPEARASLERAVKLNP 85 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 L S+ + + A + + A A + A Sbjct: 86 GLGMAWMHLGEVLSVLPDQAQAAVDALRRASGLMPRDPRPLNALAGALMGYQRYDD---A 142 Query: 280 EVILEKIWKVNPHPEIAN-------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVS 332 + P +A+ L + + RA L + +++ + + Sbjct: 143 IGAYRAATALASEPNLADMLNNMGVALERLERRDEAVPVIRAASLIRPDSAAIQDNLGNA 202 Query: 333 KIALEMGSIDQA--HAKAMLAMKIAPR 357 + +A L K A Sbjct: 203 LLGTARAEEAEACHRRALALGAKGAET 229 >gi|299148226|ref|ZP_07041288.1| TPR-domain containing protein [Bacteroides sp. 3_1_23] gi|298512987|gb|EFI36874.1| TPR-domain containing protein [Bacteroides sp. 3_1_23] Length = 320 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 24/223 (10%), Positives = 74/223 (33%), Gaps = 42/223 (18%) Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + + R+G + A + +AL I + + Q Y+ E ++A L + Sbjct: 35 GLR-----AQRMGRPDYAVKCFIEALAIK-EEFETMGYLSQLYIQMGETAKARELLEKMA 88 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 + + + + D A A +++ + + +++A K Sbjct: 89 AMEPDVTS----TFLTLANVCFIQEDYQAMEEAANKAIAIEEGNVVAHYL-------LGK 137 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 RK + ++ + + + + + +E+ ++ ++ Sbjct: 138 ARKGQ------------------------DDDLMTIAHLTKAITLKDDFIEARLLRAEAL 173 Query: 336 LEMGSIDQAHAKAMLAMKIAPRKEIFLLL-AQIEQANSHNTDK 377 + + + P +E +LL ++++A+ + + Sbjct: 174 MNLKQYKDMMEDIDAVLAQNPEEETAMLLRGKVKEADGKDEEA 216 >gi|239906686|ref|YP_002953427.1| hypothetical protein DMR_20500 [Desulfovibrio magneticus RS-1] gi|239796552|dbj|BAH75541.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 402 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 39/120 (32%), Gaps = 5/120 (4%) Query: 164 SCRIGDLN-SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + + D + A + AL+++P + ++ A+ L + + Sbjct: 251 ALKQLDRDDEALQAYEIALNLNPSDAGAWYSKGVILGTHGQYDEALLALEKALQIN--SK 308 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A +L + ++ + +L L I A A +L + +A + Sbjct: 309 SPHAWNNFGAALNSLNR--PEEALAALDMALSLDPELIPAQHNRAGALKQLGRLDEALAV 366 >gi|162451294|ref|YP_001613661.1| hypothetical protein sce3022 [Sorangium cellulosum 'So ce 56'] gi|161161876|emb|CAN93181.1| hypothetical protein sce3022 [Sorangium cellulosum 'So ce 56'] Length = 496 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 48/352 (13%), Positives = 99/352 (28%), Gaps = 85/352 (24%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + + A + + + L Q + + A + + + + Sbjct: 92 AFGERDYEKAISALKRIITMDPDDHAARLNLASAQANM--GDHPAALKSFQAIRKTFQGD 149 Query: 154 E-----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ----------- 197 L + ++A AL+ PD +A+VQ Sbjct: 150 ADYHVAVGQVHLAMQKK-----DAALDEMVLALEAKPDCQPALDAMVQLGVLLPIYENPR 204 Query: 198 --------------YVLAKEWSRA----------ITFLNQKKKN--------------AK 219 LA +W A + + ++ ++ + Sbjct: 205 DAASLVYVRADAVLEYLAGQWDAAPRDGAFYLEQLAYHERELRHDVALAAAERAAAASGE 264 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 +R RA L +L + + D +A + +S A + AK L + + Sbjct: 265 GASRERAHLARIAALRSLGRTDEALGAAEAFVAT--APSSSGAWVELAKCLSQAGRGAEV 322 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLK---RALRLEEINKESVES---LVIVSK 333 +E+ + +P ++A + + K L ES +++ Sbjct: 323 PAAVERALESDPG-DLAALSLRFWPSDPADIQKVNEAIPALAAFVAAHPESAGARRSLAR 381 Query: 334 IALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 L G ID A A A+ +AP + + YWT+ Sbjct: 382 AELVAGRIDDALAGFAAAVALAP---------------GDDDLRAEYWTELG 418 >gi|115379807|ref|ZP_01466876.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] gi|115363183|gb|EAU62349.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1] Length = 3238 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 53/188 (28%), Gaps = 10/188 (5%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA---TREFAVYSLY-F 162 S + + + Q A + E L+ + + R + L Sbjct: 444 ASLARAVRMMPADAALRVTARQAAEDADSLDSYAEILQELTEEGNVGAARASLLRELADV 503 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + ++ D A L + P +++ + + ++W+ L + A E Sbjct: 504 QEKKLDDKAGAVHALRALLALEPSNADCLKSLQRLHRAGEQWAELAEVLERLASVATEPA 563 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A L A L + + + A++ + + + Sbjct: 564 EQVAYLREAALLHETKLANKERAAATWRTLAERDPLQREAAVALDRLYTDLGRTK----- 618 Query: 283 LEKIWKVN 290 E W ++ Sbjct: 619 -ELAWALS 625 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 29/254 (11%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA---ITFLNQKKKNAK 219 + D +A Y + L D+ + YV ++W+ A + + +K Sbjct: 2656 HAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERMLDIVTRKMAEKA 2715 Query: 220 EWNRNRAILL-----IARSLENADK-GDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 ++ A+ L + R A+K G + +S L + L+ Sbjct: 2716 IAEKDGALTLELSRQLYRLGYVAEKLGKREKALDAYEKSYGLDARYLATLESYGHLLVQA 2775 Query: 274 NKKRKAEVILEKIWKVNPHPE-------------IANIYTHLLSENTVGKLKRALRLEEI 320 + A +L+ I + H E + ++ L + + I Sbjct: 2776 KRYDDALKVLQAI--LVHHRESLTDLEVVEVYWQLGDVLAALGHSDRAQ--NHFEKALAI 2831 Query: 321 NKESVESLVIVSKIALEMGSIDQA---HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDK 377 + SL + + + G ++A + + + + ++L L +I + + Sbjct: 2832 DPGHEPSLRALVSLMDKAGRHEKAAELRQQLVSVVDGEAKARVYLELGEIARDKLKDPYM 2891 Query: 378 ILYWTQSALHAMPD 391 + AL PD Sbjct: 2892 AIDAFTGALKVKPD 2905 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D SA+ +AL I P A+ K+W L Q+ + ++ L Sbjct: 2590 DTGSAKTCYQQALAIDPGHLASIRALKGIQEQEKDWGGYEQTLLQEAQQTEDPQAKARAL 2649 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L + D + H + LK +S+ A+ A +++ AE +L Sbjct: 2650 LDVAKYHAETREDGETATHYYEQVLKHVHDSLEAARPLADVYVAREDWTAAERML 2704 >gi|75812660|ref|YP_320278.1| TPR repeat-containing serine/threonin protein kinase [Anabaena variabilis ATCC 29413] gi|75705416|gb|ABA25089.1| serine/threonine protein kinase with TPR repeats [Anabaena variabilis ATCC 29413] Length = 707 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 4/88 (4%) Query: 131 LAERQYNIAH-EKLEMMLQIP-ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + M P R + V L CR + + A + +A +++P Sbjct: 373 QLHLDETQAEIAAKKAMQLKPNDGRSYGVLGLVN--CRKSNWSEALKNLEQAANLAPQEV 430 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKK 216 W+ + + W +A +N+ + Sbjct: 431 WIQANLAWALGKSGNWQQAENTVNKALQ 458 >gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A] gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 1121 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 43/148 (29%), Gaps = 4/148 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E + L + A Y + S +G A Y + L + P + Sbjct: 690 GRSEEALECYKKALDLDPQSSNAWYGMASTSNTLGRSEEAVAYYDQLLAANASDPEALQG 749 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + + AI N E L R+L A + D L Sbjct: 750 KSEALINLGRYEEAIACFN----PLLELEPENIEALDGRALALARSERREEALEDYNRIL 805 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEV 281 +L ++ A A + +A Sbjct: 806 QLDPSNTKALAEKASLFEELGRYEEAAS 833 >gi|114320028|ref|YP_741711.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1] gi|114226422|gb|ABI56221.1| peptidase M48, Ste24p [Alkalilimnicola ehrlichii MLHE-1] Length = 427 Score = 40.7 bits (94), Expect = 0.64, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 3/146 (2%) Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNI 138 R + ++A ++ A N A ++ Q++ +E + + L I Q+ Sbjct: 276 RERQEAFEAHDRAREALRAGNTAEAMRLADQAVQRY--PDEAIFHGLRGDILSVRGQHGQ 333 Query: 139 AHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 A + L + +G+ + A+R ++ D+ P+A A+ + Sbjct: 334 AVRAYDRALVRNSEYFAFHLGRGMAHNELGNHSQARRDLERSNDLLPNAV-AHNALGKLA 392 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRN 224 + A + RA ++ R Sbjct: 393 LAAGDTDRARGHFTVAAQSNSPEGRE 418 >gi|262171376|ref|ZP_06039054.1| hypothetical protein VII_002196 [Vibrio mimicus MB-451] gi|261892452|gb|EEY38438.1| hypothetical protein VII_002196 [Vibrio mimicus MB-451] Length = 234 Score = 40.3 bits (93), Expect = 0.64, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 37/216 (17%) Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +P A+ Y+ +A L + ++A + R++ ++ + Sbjct: 21 EAAAQSNPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPSYYRSQ----LSMAHYF 76 Query: 237 ADKGDMIASYHDAIESLKLCD-------NSIMASICAAKSLISQNKKRKAEV-----ILE 284 G+ ++ +L N + N R+A ++ Sbjct: 77 EAVGESDSARKMYQTALNQHPKNGNVLNNFGTFLCKQGDYETADNYFRRAVAQPYYYLIS 136 Query: 285 KIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI----VSKIALEM 338 ++ A + ++ KRA + + ++ ++K+ +E Sbjct: 137 ASYEN------AALCALKSGQNDKARDYFKRA-------VDHDPTRLLSILQLTKMEIEA 183 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSH 373 G QA + M + ++ L LL ++E+ + Sbjct: 184 GEYTQARIRLMSLNQRYGYQKASLKLLIELEKRAGN 219 >gi|302531550|ref|ZP_07283892.1| predicted protein [Streptomyces sp. AA4] gi|302440445|gb|EFL12261.1| predicted protein [Streptomyces sp. AA4] Length = 1025 Score = 40.3 bits (93), Expect = 0.64, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 32/103 (31%), Gaps = 8/103 (7%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEM 145 L L+ H LA S Q + LL + A E Sbjct: 788 LSQLLVLRGRHEEALAAMTESLSLMQTLGATDDYADLLCRRGDSRALRGDLDGAKADYER 847 Query: 146 MLQI------PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +++ P TR L + R GDL A+ A +AL Sbjct: 848 TVELAHRTGMPETRASGHVGLSGLARRSGDLAGARALAEQALA 890 >gi|148658680|ref|YP_001278885.1| protein kinase [Roseiflexus sp. RS-1] gi|148570790|gb|ABQ92935.1| protein kinase [Roseiflexus sp. RS-1] Length = 545 Score = 40.3 bits (93), Expect = 0.64, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 78/239 (32%), Gaps = 15/239 (6%) Query: 58 LFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFH 117 L V + P + +R+ + +K GL + A + + Sbjct: 303 LQRVREALVGAPFVCESSFDQRDEAEQWK--ERGLAHMNMSEYKEAIRCFKRAVELD--Q 358 Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR-----EFAVYSLYFESCRIGDLNS 172 ++ + L + L Y+ A + +E L+ +R + F + + Sbjct: 359 DQPDSWDLMARCLLKLWMYHEALQSVEEGLRRAVSRTEFGNLYGARGEIFTAMQK--PLE 416 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A KAL P P + + A + + + I Sbjct: 417 ALTAYDKALSYMPSMPALWRGKGALLQHIGDAQSAQECFEKAIA----LDPSDTIAHRQL 472 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A +G A+ E+LKL S+ + +SL+ +K +A + EK K++P Sbjct: 473 GDLLASRGRWKAAVDSYAEALKLDPRSVEGWVKYGESLLRLGRKEEARIAFEKALKLDP 531 >gi|315187027|gb|EFU20784.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta thermophila DSM 6578] Length = 365 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 5/157 (3%) Query: 130 ALAERQY-NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL ++ A + E +L++ +A+ L + G+ + A Y + L P Sbjct: 22 ALLKQDRPEEAIIRFEKILELDRHNNYALVGLGDAYRKKGEHDRAVSYYRECLRYYPGNN 81 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + Y + + AI + K ++ +L + G+ S Sbjct: 82 YALFGLADCYKAQERYREAIEIWEKYLK----YDETNVTVLTRVADAYRKTGNFKRSKEL 137 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 ++ L+L + + A I R A E Sbjct: 138 YLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEA 174 Score = 39.1 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 90/270 (33%), Gaps = 24/270 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A + + + +N L L A+ +Y A E E L+ T + Sbjct: 61 GEHDRAVSYYRECLRYYPGNNYALFGL--ADCYKAQERYREAIEIWEKYLKYDETNVTVL 118 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + + G+ ++ K L++ P+ + + K++ AI++ + Sbjct: 119 TRVADAYRKTGNFKRSKELYLKVLELDEGNPYALIGLGHLHYDFKDYRTAISYWEAILER 178 Query: 218 AKEWNRNRAILLIA---RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ R + I R L+ ++G +++L+ ++ A A Sbjct: 179 DRDRVDIRVLTAIGNCHRKLKQYERGIPYF-----LKALEKDPHNFYALFGLADCYRGVG 233 Query: 275 KKRKAEVILEKIWKVNPHPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 R++ E+I + +PH ++ + Y HL L RA Sbjct: 234 DHRRSLQYWERILEKDPHNKVILTRTGDAYRHLGD------LARAEEYYHQALNIEFDSY 287 Query: 330 IVSKIAL---EMGSIDQAHAKAMLAMKIAP 356 + +A+ +A +++ P Sbjct: 288 AILGLAMVHKARKEYREAAESLNTILRLDP 317 Score = 36.8 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 5/152 (3%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +QY L+ +A++ L +GD + +Y + L+ P + Sbjct: 199 KQYERGIPYFLKALEKDPHNFYALFGLADCYRGVGDHRRSLQYWERILEKDPHNKVILTR 258 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Y + +RA + +Q + + ++ ++ + + + + L Sbjct: 259 TGDAYRHLGDLARAEEYYHQALNIEFD-----SYAILGLAMVHKARKEYREAAESLNTIL 313 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 +L + I A + N+K +A +L++ Sbjct: 314 RLDPENPKIYIELADCYLHLNQKEEARSVLKE 345 >gi|262165791|ref|ZP_06033528.1| hypothetical protein VMA_002240 [Vibrio mimicus VM223] gi|262025507|gb|EEY44175.1| hypothetical protein VMA_002240 [Vibrio mimicus VM223] Length = 237 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 37/216 (17%) Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +P A+ Y+ +A L + ++A + R++ ++ + Sbjct: 24 EAAAQSNPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPSYYRSQ----LSMAHYF 79 Query: 237 ADKGDMIASYHDAIESLKLCD-------NSIMASICAAKSLISQNKKRKAEV-----ILE 284 G+ ++ +L N + N R+A ++ Sbjct: 80 EAVGESDSARKMYQTALNQHPKNGNVLNNFGTFLCKQGDYETADNYFRRAVAQPYYYLIS 139 Query: 285 KIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI----VSKIALEM 338 ++ A + ++ KRA + + ++ ++K+ +E Sbjct: 140 ASYEN------AALCALKSGQNDKARDYFKRA-------VDHDPTRLLSILQLTKMEIEA 186 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSH 373 G QA + M + ++ L LL ++E+ + Sbjct: 187 GEYTQARIRLMSLNQRYGYQKASLKLLIELEKRAGN 222 >gi|258624556|ref|ZP_05719496.1| fimbrial biogenesis and twitching motility protein, putative [Vibrio mimicus VM603] gi|258583171|gb|EEW07980.1| fimbrial biogenesis and twitching motility protein, putative [Vibrio mimicus VM603] Length = 237 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 37/216 (17%) Query: 178 TKALDISPD-APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 A +P A+ Y+ +A L + ++A + R++ ++ + Sbjct: 24 EAAAQSNPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPSYYRSQ----LSMAHYF 79 Query: 237 ADKGDMIASYHDAIESLKLCD-------NSIMASICAAKSLISQNKKRKAEV-----ILE 284 G+ ++ +L N + N R+A ++ Sbjct: 80 EAVGESDSARKMYQTALNQHPKNGNVLNNFGTFLCKQGDYETADNYFRRAVAQPYYYLIS 139 Query: 285 KIWKVNPHPEIANIYT--HLLSENTVGKLKRALRLEEINKESVESLVI----VSKIALEM 338 ++ A + ++ KRA + + ++ ++K+ +E Sbjct: 140 ASYEN------AALCALKSGQNDKARDYFKRA-------VDHDPTRLLSILQLTKMEIEA 186 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFL-LLAQIEQANSH 373 G QA + M + ++ L LL ++E+ + Sbjct: 187 GEYTQARIRLMSLNQRYGYQKASLKLLIELEKRAGN 222 >gi|224535460|ref|ZP_03675999.1| hypothetical protein BACCELL_00323 [Bacteroides cellulosilyticus DSM 14838] gi|224522926|gb|EEF92031.1| hypothetical protein BACCELL_00323 [Bacteroides cellulosilyticus DSM 14838] Length = 474 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 39/141 (27%), Gaps = 7/141 (4%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQY-VLAKEWSRAITFLNQKKKNAKEWNRN 224 ++G+ ++A KA + AP + V EW L + + + Sbjct: 247 QLGNEDAALECYQKAEQMHGLAPEFVYTYIGLCKVSKGEWEEGYENLEKAIQANEAEETP 306 Query: 225 RAILLIARSLENADKGDMIASYHD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 L + M ++ KL A + + + + K Sbjct: 307 APTLPSLYANAGLCLSKMKKKRKAHQYCKKAQKLEPKDPEAYLIEGRMYVEEGDYEKGIK 366 Query: 282 ILEKIWKVNPHPEIANIYTHL 302 K P A+ + + Sbjct: 367 QWAKALNCAP---SADTWNEI 384 >gi|255944335|ref|XP_002562935.1| Pc20g03850 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587670|emb|CAP85714.1| Pc20g03850 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1430 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 31/197 (15%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR----AITFLNQKKKNAKEWNR 223 D A+R KA ++S E + + + +KEW A ++ K ++ Sbjct: 587 KDKARARRCFHKAFELSTSEIEAAERLARDFADSKEWDLVEAIAQRVVDSGKARPSPGSK 646 Query: 224 NRAILLIARSLE--NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R +L +K S +L+L + + A+S + A Sbjct: 647 RRGFSWPYAALGSVQVNKQQYSKSIVSFQAALRLAATDYHSWVGLAESYHHSGRYNAATK 706 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV-ESLVIVSKIALEMGS 340 E+ + P L +KE + + +++ + E+G Sbjct: 707 AFEQAKLLEP------------------------ELSAKDKEHIWFARYMLANVRRELGQ 742 Query: 341 IDQAHAKAMLAMKIAPR 357 D+A A +K P Sbjct: 743 YDEAIAAYEDVLKSRPD 759 >gi|209516118|ref|ZP_03264977.1| hypothetical protein BH160DRAFT_1254 [Burkholderia sp. H160] gi|209503402|gb|EEA03399.1| hypothetical protein BH160DRAFT_1254 [Burkholderia sp. H160] Length = 915 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 1/128 (0%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILL 229 ++A + AL +P T + Q V ++W A L A R R + Sbjct: 322 DAAAEWFEAALAFAPQDVGATVGLAQVRVAQRDWDGADALLEPAPVAADARARELRGQIA 381 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +AR+ + +G S + + L + +L + +AE + + Sbjct: 382 LARADDAYRQGHYAESLRELDLAAGLGVPEASTGVLRGWNLYALRHYAEAERVFRARYDA 441 Query: 290 NPHPEIAN 297 + + A Sbjct: 442 SHDEDSAE 449 >gi|194861421|ref|XP_001969780.1| GG10284 [Drosophila erecta] gi|190661647|gb|EDV58839.1| GG10284 [Drosophila erecta] Length = 590 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 11/205 (5%) Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++L ++ + + NA RA I R+ D E+ +L Sbjct: 306 FHLLCGSYTESQQDFDAILANADADPNLRAYAYIKRAALFIQLDQRDKCLADFDEAERLN 365 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA---NIYTHLLSENTVGKLKR 313 + A+ L+ + A EK ++ P+ IA Y G +R Sbjct: 366 PENPDVYHQRAQILLLLEQIGPALAEFEKAVRIAPNHAIALVQKCYAEYRLSLLAGDERR 425 Query: 314 ALRL-------EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + E VE +++++ + QA AMK+AP ++ Sbjct: 426 LESVMHNFQNAIERFPSCVECYSLMAQMLADQQQFSQAQEYYTKAMKLAPTNPALIVHQA 485 Query: 367 IEQAN-SHNTDKILYWTQSALHAMP 390 I + + + A+ P Sbjct: 486 IMVLQWRGDIEVAVQLLNKAIEVDP 510 Score = 37.6 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 6/129 (4%) Query: 173 AQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 A KA+ I+P+ A + +LA + R + + +NA E + Sbjct: 388 ALAEFEKAVRIAPNHAIALVQKCYAEYRLSLLAGD-ERRLESVMHNFQNAIERFPSCVEC 446 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS-QNKKRKAEVILEKIW 287 + AD+ + +++KL + + A ++ + A +L K Sbjct: 447 YSLMAQMLADQQQFSQAQEYYTKAMKLAPTNPALIVHQAIMVLQWRGDIEVAVQLLNKAI 506 Query: 288 KVNPHPEIA 296 +V+P E+A Sbjct: 507 EVDPKCELA 515 >gi|21241716|ref|NP_641298.1| hypothetical protein XAC0946 [Xanthomonas axonopodis pv. citri str. 306] gi|21107084|gb|AAM35834.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 565 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L A+ Sbjct: 316 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAEARALQGD 375 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 376 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 431 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ +P +P I Sbjct: 432 DDVPRAEADLRKILVTEPENVAALNALGYTLADRTTRYKEALALIDRARTADPDNPAIVD 491 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 492 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 547 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 548 RLDPDNRAL 556 >gi|120556583|ref|YP_960934.1| rhomboid family protein [Marinobacter aquaeolei VT8] gi|120326432|gb|ABM20747.1| Rhomboid family protein [Marinobacter aquaeolei VT8] Length = 483 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 24/152 (15%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS- 184 + +L ++++A + E + + R + LY + DL+S + A + + + Sbjct: 331 QAMASLGRMEFDLARRQFEALRERYPERPVLLEHLYQLAKLRPDLDSYRMRAEEMMADAI 390 Query: 185 -----------------------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 P AP V+ + ++ A + + A+ Sbjct: 391 ARRQPEQMVDVWQEYLSKGEAYHPLAPEAHNRVLFASLKRHDFKAAEKAFERMRAKAEPD 450 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESL 253 N A L+ E Y ++ Sbjct: 451 MVNEACRLLVAEFEKLQMEPKARHYRQLLQVH 482 >gi|75761643|ref|ZP_00741592.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490864|gb|EAO54131.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 222 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 14 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 73 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 74 AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 129 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 130 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 183 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 184 YVFEENNEKALALFKKATEIQPDHF 208 >gi|312219437|emb|CBX99381.1| hypothetical protein [Leptosphaeria maculans] Length = 1999 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 2/129 (1%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL +A A Y A + + +L I A+ +L + A+ Y +A+ + Sbjct: 879 LLGGCLAYALGDYQKAQDWYKHILTIDRDHVEAISNLAATYLALQQKRDAEAYWRRAVRL 938 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P E ++ A+ + + ++ + R A L + E+ + Sbjct: 939 RPSYFEAVEHLIGLLCSDHRGREAVAIIEEVERKLRFVRREDA--LRSLEAESERSSSTV 996 Query: 244 ASYHDAIES 252 + D E+ Sbjct: 997 SESPDLSEA 1005 >gi|288960921|ref|YP_003451260.1| hypothetical protein AZL_b00530 [Azospirillum sp. B510] gi|288913229|dbj|BAI74716.1| hypothetical protein AZL_b00530 [Azospirillum sp. B510] Length = 362 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 2/128 (1%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR-- 223 + D + A +A+ I P+ + E+ A+T +N Sbjct: 212 QQNDRHGAIHQFEEAVHIDPNFLSPRLNLGVVNARLGEYDAAVTNFTAVVENPAVAQSPA 271 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 +A L A G + +Y ES + N A+ L +Q ++ +AE + Sbjct: 272 VKAAALSEWGFTLALTGRIDEAYAKFDESTRTDPNFSDVFSSWAEVLSAQGRREEAERMT 331 Query: 284 EKIWKVNP 291 K K+ P Sbjct: 332 AKALKLAP 339 >gi|237757020|ref|ZP_04585474.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237690823|gb|EEP59977.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 105 Score = 40.3 bits (93), Expect = 0.65, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 1/101 (0%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + + + + + P +Y L E + G A Y K L + D + Q Sbjct: 2 DRIEQLKKALEKDPN-NPLGLYGLALELYKQGLYEDAIIYFKKYLSLYEDQGAAYRTLAQ 60 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 Y+ + +AI + + A+++N + + +E Sbjct: 61 CYINIGDIEQAIETYERGIEKARKYNHPTMVEEFKQEIERL 101 >gi|322436889|ref|YP_004219101.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] gi|321164616|gb|ADW70321.1| Tetratricopeptide TPR_1 repeat-containing protein [Acidobacterium sp. MP5ACTX9] Length = 502 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 38/214 (17%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKNAKEWNRNR 225 A KA+ ++ D+ V A+V +W+RA Q+ + + E Sbjct: 247 RDAALKAYEAVQKAVKLNKDSLPVRTALVNVLTNCTWDWARA----EQECRASVEAGVMD 302 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A ++ S +G + A+ +L+L I AS Sbjct: 303 ARMIQLYSSLVGCQGRHEEALSLAMHALRLDPE-IPAS---------------------- 339 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 H +IA Y + + L A + + + + ++++I G D A Sbjct: 340 ------HSQIAQAYLYA--GDYANALNSAKKYLMVRPDFATAHALLTRILAVSGDWDGAL 391 Query: 346 AKAMLAMKIAPRK-EIFLLLAQIEQANSHNTDKI 378 + A++I+ R L+A ++ + Sbjct: 392 TECQTAVEISGRSPSSLALMAYVQAG-RGDVQAA 424 >gi|253998812|ref|YP_003050875.1| hypothetical protein Msip34_1101 [Methylovorus sp. SIP3-4] gi|313200899|ref|YP_004039557.1| hypothetical protein MPQ_1157 [Methylovorus sp. MP688] gi|253985491|gb|ACT50348.1| tetratricopeptide repeat protein [Methylovorus sp. SIP3-4] gi|312440215|gb|ADQ84321.1| tetratricopeptide repeat protein [Methylovorus sp. MP688] Length = 387 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 12/157 (7%) Query: 134 RQYNIAHEKLEMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A +L + + L + + G L+ A+ P Sbjct: 85 GEVDRAIHLHLNLLDRKELPEQQKLAVMAELAQDYLKAGLLDRAEELFKSLDGSRYKQP- 143 Query: 190 VTEAVVQQYVLAKEWSRAIT-FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY-- 246 ++++ YV +EW RAI ++ + + + A ++++ D + Sbjct: 144 ALRSLLEIYVREREWERAIKCATELERISGIPFRKEIAQYYCEMAVKSILNNDAHTARYE 203 Query: 247 -HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A+++ K C + A+I + + A I Sbjct: 204 LDMALDANKAC---VRATIMLGDMEAAAGDHKAAIAI 237 >gi|168699317|ref|ZP_02731594.1| hypothetical protein GobsU_07347 [Gemmata obscuriglobus UQM 2246] Length = 415 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 87/266 (32%), Gaps = 41/266 (15%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL Y A E +++ +GD A +A+ + PD Sbjct: 20 ALTAGDYQEAVECYSRAIRLRPGDFAGYRFRAHAYIELGDRVRALNDLDQAIRLKPDDAQ 79 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 ++ ++ +AIT ++ K + R L+ R +AD+GD A++ D Sbjct: 80 TYADRAEELFAQVQYDQAITDCDRALK----LDPKRVALVALRGRCHADRGDSEAAFRDF 135 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 ++ N N R ++W+ H ++ EN Sbjct: 136 AAAIDADPN---------------NAYRY------RLWRAQLHLDL---------ENYTA 165 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-------KEIFL 362 L A + + +L + + + G A A +++ P + + Sbjct: 166 ALDDATTVIAADPRHAGALALRATVRQFAGDYAAAVADYTATLEVKPNDPLVHLGRAVCR 225 Query: 363 LLAQIEQANSHNTDKILYWTQSALHA 388 LL + + + D+++ + A Sbjct: 226 LLLRDYVGAAADADEVIRQLPGVVRA 251 >gi|119630611|gb|EAX10206.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_a [Homo sapiens] Length = 853 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 486 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 545 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 546 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 605 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 606 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 664 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 665 RAIYELAI 672 >gi|33594049|ref|NP_881693.1| hypothetical protein BP3128 [Bordetella pertussis Tohama I] gi|33564123|emb|CAE43395.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332383466|gb|AEE68313.1| hypothetical protein BPTD_3090 [Bordetella pertussis CS] Length = 628 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 86/271 (31%), Gaps = 48/271 (17%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 R+M + ++L +IA + +Y+ A +L + PA R A + Sbjct: 361 RQMATAPGATDAGAAAADAHVLLSRIAEDQGRYDEAIRELGR-IDDPAMRYSAH---MRQ 416 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + A+ +++ E Sbjct: 417 AT-------------------------------LRARQGRIDGALAMVDRADPQDDE--- 442 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 R + ++ ++ D + + + + K +++ A Q + + E +L Sbjct: 443 ERTLGVLTKAQILRDADQVDRAVAILVAADKAMPDTVEIKYELAMLYERQGRIDQLERLL 502 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRL------EEINKESVESLVIVSKIAL 336 ++ ++ P+ A+ Y + L + +R L E++ E L + + Sbjct: 503 REVIALD--PDHAHAY-NALGYTLADRNQRLPEALDLITQALELSPEDPFILDSMGWVKF 559 Query: 337 EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 MG A A + P +I LA++ Sbjct: 560 RMGEPSAAIEYLKRAYALRPEADIAAHLAEV 590 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 8/265 (3%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 ++ ++A Y A L + + A L F+ G+L A A Sbjct: 94 RIVGAELAAQRGMYGTAAATLVTLARETGDPRLARRGLEFQ-LAGGNLPGALDAARAWSS 152 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P+ + + E S L + + R++ ++ + D Sbjct: 153 LAPNDIEASSTELALAAANGETSG----LATALRKRIDTARDKPAAIVQAMGVLSRLNDR 208 Query: 243 IASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNPHPEIAN--IY 299 + ESL + A+ A A + +A +P E A + Sbjct: 209 RLALRILDESLSDSARKLPAAHLALADVAQAAGDYPRAANEAYAALAADPKSEAAAQRVL 268 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 + + +A N ++ + ++++ + G D A A+ + +P Sbjct: 269 EYGAKVDATRAQHQARAFINRNPDARKLRLMLAGQIADGGDYDGALAELQAMSRRSPEDF 328 Query: 360 IFLLLAQIEQANSHNTDKILYWTQS 384 + + + D+ + Q Sbjct: 329 DLMFMQAQLAYKAGRLDQARGYLQQ 353 >gi|47566583|ref|ZP_00237405.1| TPR domain protein [Bacillus cereus G9241] gi|229158011|ref|ZP_04286082.1| TPR domain protein [Bacillus cereus ATCC 4342] gi|47556613|gb|EAL14945.1| TPR domain protein [Bacillus cereus G9241] gi|228625464|gb|EEK82220.1| TPR domain protein [Bacillus cereus ATCC 4342] gi|324328298|gb|ADY23558.1| tetratricopeptide repeat family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 219 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ +N L + EI + Sbjct: 181 YVFEDNNEKALALFKKATEIQPDHF 205 >gi|302814181|ref|XP_002988775.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii] gi|300143596|gb|EFJ10286.1| hypothetical protein SELMODRAFT_128575 [Selaginella moellendorffii] Length = 668 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 88/305 (28%), Gaps = 26/305 (8%) Query: 63 RFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV 122 R F A+L K + A + ++ A K + F+ LV Sbjct: 332 RDFQQAIALLKEFERKERDLQARAATNLSFLYFLEGDLANAEKHAELAVLNNRFNACALV 391 Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A + + + A+Y+L ++ A K Sbjct: 392 N--QGNCYFMRGDPERAKQVYKGAADVDPDCVEALYNLGLAYKKLNSFEEALSVFKKISY 449 Query: 183 ISPDAPWV------TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + P+ V V+ A +W + L K + A LL Sbjct: 450 VLPNNTEVLFQIGQVSDVMGNSRQAIKW---LELLVSKVMH-------DAGLLAMLGNLY 499 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-- 294 D + H ES ++C ++ + + KA + ++ HPE Sbjct: 500 VRCEDDAKALHYFSESHRVCPTDVVVTAWLGSFYLQNELYEKAMPFFQLASRI--HPEEV 557 Query: 295 ----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + + + L + ++ + ++ E L + + +G + A Sbjct: 558 VKWKLKVALCLRRTGSFSKALHKYKQILSAHPDNAECLRCLVHLCTSLGRKMEVQAYESK 617 Query: 351 AMKIA 355 K+ Sbjct: 618 LWKVD 622 >gi|254416035|ref|ZP_05029791.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] gi|196177210|gb|EDX72218.1| Tetratricopeptide repeat family [Microcoleus chthonoplastes PCC 7420] Length = 762 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 58/152 (38%), Gaps = 4/152 (2%) Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + ++ +G + + +++ +S+ A + A + Q ++ Sbjct: 23 PAVHAQTVPTAVRQAFSLLSQGRVQDAIAAFEAAVRRYPDSLDAKLGLAIAHRRQGNLQQ 82 Query: 279 AEVILEKIWKVNPHPEIAN----IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 A +++ +P E+A ++ SE V ++ L +N +E+ + +++ Sbjct: 83 AWNAYQQVLAQDPTNELALKSVGLFGTYRSEWQVQGIEALTTLLNLNPNDIEARGLRAQL 142 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 +A A + ++ P I L A+ Sbjct: 143 YGFQQRFAEALADYQIVLQANPSPNILLGAAE 174 >gi|119630612|gb|EAX10207.1| Crn, crooked neck-like 1 (Drosophila), isoform CRA_b [Homo sapiens] Length = 841 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 474 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 533 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 534 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 593 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 594 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 652 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 653 RAIYELAI 660 >gi|73979996|ref|XP_861389.1| PREDICTED: similar to selective LIM binding factor, rat homolog isoform 5 [Canis familiaris] Length = 1525 Score = 40.3 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 29/176 (16%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 +S+ H ++L E ++ A + P ++F + Sbjct: 1131 ELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIR-AGKPKEAVL----MFFHNQ--- 1182 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +AQR A PD+ V E +++Q A L +K ++ + +L Sbjct: 1183 DWEAAQRVAE---AHDPDS--VAEVLLRQ---------AREALEEK-----DFQKAEGLL 1223 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L R+ + ++L++C + + + A + + +K LE Sbjct: 1224 L--RAQRPGLALNYYKEAGLWSDALRICKDYVPGQLEALQEEYEREATKKGARGLE 1277 >gi|317052270|ref|YP_004113386.1| tetratricopeptide repeat-containing protein [Desulfurispirillum indicum S5] gi|316947354|gb|ADU66830.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfurispirillum indicum S5] Length = 1017 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 62/209 (29%), Gaps = 21/209 (10%) Query: 143 LEMMLQIPATREFAVYSLYFE---------SCRIGDL-----NSAQRYATKALDISPDAP 188 E ++ P T V E GD + ++ +L I DA Sbjct: 83 YEKPVEDPQTVLLGVSGQREEPEKPWGRSIHLERGDQYFLSGDYSRAINEYSLAIGTDAA 142 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + Y ++ +AI + + A L + + + Sbjct: 143 LAYHNLGVIYTELGDFKKAIESFQRAIAARPSLPES----YSALGLALHEVSRNVEALQY 198 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---YTHLLSE 305 +++L+L ++ + + A + ++NP A L++ Sbjct: 199 HLQALRLDPDNSEFHNNVGNAYLYLGDYANARRHYTRAIEINPSNTQAMANQNSLLLITG 258 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKI 334 + ++ + + ++ E L+ + Sbjct: 259 DYDAAIQGFREILSADPDNYEVLMNLGMA 287 >gi|302916241|ref|XP_003051931.1| hypothetical protein NECHADRAFT_78614 [Nectria haematococca mpVI 77-13-4] gi|256732870|gb|EEU46218.1| hypothetical protein NECHADRAFT_78614 [Nectria haematococca mpVI 77-13-4] Length = 515 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 56/211 (26%), Gaps = 39/211 (18%) Query: 120 YLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + +LL Q L+ + + A + + T V+ IG A Sbjct: 32 PVSHLLSSAQEHLSRGETSEALIYYDAAIARDPTNYLTVFKRATAYLSIGRTTQATDDFN 91 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRA----------------------------ITF 210 K L + P + + + +W A T Sbjct: 92 KVLALKPGFEGAHLQLARLRGRSGDWDLAKNEYRSAGLAPDSAEVKELEEAKLAAALATM 151 Query: 211 LNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSI 260 + +K NA A L R+ + GD+ D L L + Sbjct: 152 AEKAQKWEECVKASSNAITVASRSAHLRELRAHCRFEHGDVEEGLSDLRHVLHLRPGDIS 211 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + +A S ++K + +P Sbjct: 212 PHVVISATSFYGLGDMESGIGQIKKCLQSDP 242 >gi|198421851|ref|XP_002124401.1| PREDICTED: similar to Anaphase promoting complex subunit 7 [Ciona intestinalis] Length = 542 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 87/238 (36%), Gaps = 20/238 (8%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT---KALDI 183 ++ A L+ + + F + + + + D A+ + + Sbjct: 230 AIACYMADDHDSAMMHLKSLHRQER---FWLRGMDLYASLLYDEKKAEELGKFSTELFAV 286 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 S P A+ +L +++++A+ + N + +A LL ++ G++ Sbjct: 287 SDLQPESWIALGYHALLNEDYTKAVYL--AARANQLDPFSVQAFLL--KAAGLVGLGEVQ 342 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIANIYT-H 301 + + E++ L + + +S+N+ A + + ++ P P + Sbjct: 343 TALSHSKEAISLAPHRLDCYAKLVSCYMSENRNNDALTVAKSAFEALGPSPGSYVLCALT 402 Query: 302 LLSENTV-----GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +L +++V + RAL L+ +K ++E+ + +A LA + Sbjct: 403 MLPDSSVLDKAGKLVDRALTLDPNHKSAIETKCTIL---YRQEKYSEAIKCLKLATQR 457 >gi|193213199|ref|YP_001999152.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327] gi|193086676|gb|ACF11952.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327] Length = 646 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 92/289 (31%), Gaps = 43/289 (14%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + ++ + +H + L + L+ Q + Y A + Sbjct: 152 DYDQVNRLLAEFRNKHAELRQDLARVDYLQGQNYELQINYPEAERYYKKAAATEDENPLY 211 Query: 157 VYSLYFESCRIGDLNSAQRYATKAL-----DISPDAPWVT---EAVVQQYVLAKEWSRAI 208 + + ++G + A+ +AL + P+ P V + + A Sbjct: 212 LDAHATILWKMGRYDEAEPLFRRALAIDKKALGPNHPNVAIRLNNLANLLADQGNYRDAE 271 Query: 209 TFLNQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + + N + ++ + D+ + + AI L N Sbjct: 272 PLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRALAIREKSLGPNH 331 Query: 260 IM--------ASICAAKSLISQNKK--RKAEVILEKIWKVNPHPEIANIYTHL------- 302 A++ KS + + R+A I EK N HP++AN +L Sbjct: 332 PGVATTLNNLAALLDNKSRYDEAEPLYRRALAIREKSLGPN-HPDVANTLNNLAVLLDNK 390 Query: 303 -LSENTVGKLKRALRL--EEINKESVESLVIVSKIALEMGS---IDQAH 345 + +RA+ + + + + ++ +A+ +G+ D+A Sbjct: 391 SRYDEAEPLYRRAIAIDEKALGPNHPDVANTLNNLAVLLGNKSRYDEAE 439 >gi|90076642|dbj|BAE88001.1| unnamed protein product [Macaca fascicularis] Length = 449 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 13/155 (8%) Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVIL 283 L R+L + + + D + +LKL +++ + + A++LI+Q + +L Sbjct: 97 ALCGRALVHLALDQLQEAIDDILSALKLGPGTVVPELRSLKPEAQALITQGLYSRCRALL 156 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 ++ + L E+T G L L +I+ ++ +++ I + GS ++ Sbjct: 157 S---------QLLDTGAPLEDEDTQGLLAVGQALIKIDAGQLDWHLLLVDILMARGSYEE 207 Query: 344 AHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 A A+ AP E + + + Sbjct: 208 AGTHLEKALHPAPTSEAARARLGLLRLKKGDVPAA 242 >gi|1688076|gb|AAB36872.1| tetratricopeptide repeat protein [Homo sapiens] gi|21707455|gb|AAH33772.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [Homo sapiens] gi|60814211|gb|AAX36291.1| DnaJ-like subfamily C member 7 [synthetic construct] gi|61355290|gb|AAX41124.1| DnaJ-like subfamily C member 7 [synthetic construct] gi|123992776|gb|ABM83990.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [synthetic construct] gi|123999522|gb|ABM87316.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [synthetic construct] Length = 484 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C + A ++ Sbjct: 169 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 224 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 225 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 284 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R N+ + + D ++KL D I A + A+ + + +A EK+ Sbjct: 285 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 344 Query: 287 WKVN 290 ++ Sbjct: 345 YQTE 348 >gi|332021351|gb|EGI61725.1| Amyloid protein-binding protein 2 [Acromyrmex echinatior] Length = 583 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 14/106 (13%) Query: 194 VVQQYVLAKEWSRAITF------LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 ++ V +++ A + +K K+ + N N A L S+ + + ++ Sbjct: 173 LLHAQVAYRDFDGAAETHQLAMEMIEKLKSKQYNNSNHAALFAEFSVLFYIRSEYDEAHR 232 Query: 248 DAIESLK-LCDNSIMASIC------AAKSLISQNKKRKAEVILEKI 286 +IE+LK L + A I AAKS + + + +KA++++++ Sbjct: 233 WSIEALKQLRPSL-PAGIIVDVLRQAAKSCVVKREFQKADLLIKEA 277 >gi|17432229|gb|AAL39004.1|AF111802_1 MSTP021 [Homo sapiens] gi|158259059|dbj|BAF85488.1| unnamed protein product [Homo sapiens] Length = 687 Score = 40.3 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 320 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 379 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 380 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 439 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 440 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 498 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 499 RAIYELAI 506 >gi|296200303|ref|XP_002747530.1| PREDICTED: crooked neck-like protein 1 [Callithrix jacchus] Length = 687 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 320 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 379 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 380 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 439 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 440 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 498 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 499 RAIYELAI 506 >gi|254488737|ref|ZP_05101942.1| TPR domain protein [Roseobacter sp. GAI101] gi|214045606|gb|EEB86244.1| TPR domain protein [Roseobacter sp. GAI101] Length = 572 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 11/198 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 QY++A E+L+ + A + + A + D P V A Sbjct: 306 GQYDLAIEELQAVPADDPAYHAAELGRAAALRQSDKPDQAIEVLQQLTRSHGDLPAVHSA 365 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + W AI ++ + E N R +L AR + GD + D +L Sbjct: 366 LGDALRAQDNWEAAIKSYDRAVELTSESNPQRWVLFYARGIAEERSGDGKGAEKDFRAAL 425 Query: 254 KLCDNSIMASICAAKSLISQNK-KRKAEVILEKIWKVNPHPEI--------ANIYTHLLS 304 + SL+ Q + +A ++E+ + P+ +Y Sbjct: 426 AINPEQPQVLNYLGYSLVEQGRNLDEALNMIERAVAAS--PDSGYIVDSLGWVLYRLGRY 483 Query: 305 ENTVGKLKRALRLEEINK 322 E VG+++RA+ L ++ Sbjct: 484 EEAVGQMERAVELIAVDP 501 >gi|60825965|gb|AAX36741.1| DnaJ-like subfamily C member 7 [synthetic construct] gi|61365329|gb|AAX42691.1| DnaJ-like subfamily C member 7 [synthetic construct] Length = 485 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 20/184 (10%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL--YFESCRIGDLNSAQRYAT 178 +L+ + +Y A +L++ +T V L Y+E C + A ++ Sbjct: 169 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDC----IEKAVQFFV 224 Query: 179 KALDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRA 226 +AL ++PD A + A + + A Sbjct: 225 QALRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNA 284 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L R N+ + + D ++KL D I A + A+ + + +A EK+ Sbjct: 285 KLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKV 344 Query: 287 WKVN 290 ++ Sbjct: 345 YQTE 348 >gi|7758|emb|CAA41263.1| crn [Drosophila melanogaster] Length = 702 Score = 40.3 bits (93), Expect = 0.68, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 80/252 (31%), Gaps = 26/252 (10%) Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176 + +++++ A + L T+E + + GD S ++Y Sbjct: 254 ARFEEGQKEHDRARIIYKYALDHLPKDRTQEL-FKAYTKHEKKYGDRAGIEDVIVSKRKY 312 Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230 + + +P ++ + + + N N R L I Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWI 372 Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285 +L E + D + L+L + A+ I + ++A L Sbjct: 373 NYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGL 432 Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + P ++ Y L E ++ + E E+ + + +++ +G D Sbjct: 433 AIGMCPRDKLFRGYIDLEIQLREFERCRM-LYEKFLEFGPENCVTWMKFAELENLLGDTD 491 Query: 343 QAHAKAMLAMKI 354 +A A LA++ Sbjct: 492 RARAIFELAVQQ 503 >gi|331664114|ref|ZP_08365024.1| conserved hypothetical protein [Escherichia coli TA143] gi|331059913|gb|EGI31890.1| conserved hypothetical protein [Escherichia coli TA143] Length = 1096 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGHQDNARLQREKLLRD 632 >gi|307110999|gb|EFN59234.1| hypothetical protein CHLNCDRAFT_138218 [Chlorella variabilis] Length = 703 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 36/150 (24%), Gaps = 21/150 (14%) Query: 74 HMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAE 133 LH R +G++AL +S+ R+M + F + Sbjct: 421 RWLHSRRE-RGHEALTHVALSLRLVVAKALRRMSKLDEAEMHFK-------------VLA 466 Query: 134 RQYNIAHEKLEMMLQIPATRE--FAVYSLYFESCRIGDLNSAQRYATK-----ALDISPD 186 M A+ + + GD +A + AL P Sbjct: 467 GWVTEGETAFGEMSGSSPVSIHQQALRGIALVALERGDKGAAMAQYERILGKAALGRGPA 526 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 W + A L K Sbjct: 527 EHWAHADYGWLLYQEGDIQGARQHLEDALK 556 >gi|291295766|ref|YP_003507164.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Meiothermus ruber DSM 1279] gi|290470725|gb|ADD28144.1| diguanylate cyclase and serine/threonine protein kinase with TPR repeats [Meiothermus ruber DSM 1279] Length = 868 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 60/180 (33%), Gaps = 17/180 (9%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQIALA 132 H G A G + + + A + + + ++ L+ L L ++A Sbjct: 200 HSARNRAGNLA-SIGNLYMEMGDFAQAHRYYEQALAEAHQSSDRLIELQVMQLMAELAYK 258 Query: 133 ERQYNIAHEKLEMMLQI------PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + Y A + +LQ + A+ L +G+ +A + + L ++ Sbjct: 259 RQDYPQALALYQTILQASQQQGLERMQATALEGLAKAQMALGEPQTATQTLLEVLALARS 318 Query: 187 APWVTEAVVQQYVLAKEW------SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 + W + L + W +A + + A + R R+ L R L K Sbjct: 319 SGWGATLLDVLLSLGEAWLAQGALEQARACAQEALELASQARRKRSTYLAHRLLAQIHKA 378 >gi|271502565|ref|YP_003335591.1| cellulose synthase operon c domain-containing protein [Dickeya dadantii Ech586] gi|270346120|gb|ACZ78885.1| cellulose synthase operon C domain protein [Dickeya dadantii Ech586] Length = 1300 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 80/288 (27%), Gaps = 50/288 (17%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQI------------ALAERQYNIA 139 A+ + +A K+ + T L L+ + + A Sbjct: 376 ASGDKGMAAKLFRADVLRRTNDFPQAERLYRDILQTDADNRNAKEGLYYVLREQNRTAEA 435 Query: 140 HEKL--------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + M P + + ++ +GD A + + P+ W+ Sbjct: 436 NTLFAALPENVRRSMAPRPVATSTPIRNEAKQALAVGDTTRAIGLLQQGVQRFPNDGWLR 495 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA-------RSLENADKGDMIA 244 + + Y + A + + + + A L A ++ + Sbjct: 496 LDLARIYQQQGNTAAATSVMQPLFRAGASGDDLYAAALFASENNAWQQASTLLSRIPPRD 555 Query: 245 SYHDAIE-SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + + ++ N MA+ A+ +S+ + A L + V P Sbjct: 556 QNEASRSLARRVNFNLQMAT---AQVYLSRGENAAAANTL-RALSVTP------------ 599 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +N K A L + V V + ++ G A A Sbjct: 600 PDNPADAGKLARALAA--SGDTTAAVAVVRSNMQRGVQGNAGDYADQV 645 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 15/250 (6%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL + A +LQ A+ + + + R GD +A Y +A + Sbjct: 276 TALNSGDISSAQTAFGQVLQANPEDADALAGMGYAAQRRGDFAAAASYLERAARQGGENS 335 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 A QQ + + Q K+ L ++ L A +A+ Sbjct: 336 ----AQRQQQAEDARFYAQLANAQQAMKSGNTAQ----ALSLSEPLVQASGDKGMAAKLF 387 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTV 308 + L+ ++ A L + R A+ L + + AN L EN V Sbjct: 388 RADVLRRTNDFPQAERLYRDILQTDADNRNAKEGLYYVLREQNRTAEANTLFAALPEN-V 446 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI 367 + + E +K AL +G +A ++ P L LA+I Sbjct: 447 RRSMAPRPVATSTPIRNE-----AKQALAVGDTTRAIGLLQQGVQRFPNDGWLRLDLARI 501 Query: 368 EQANSHNTDK 377 Q + Sbjct: 502 YQQQGNTAAA 511 Score = 37.2 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 46/232 (19%) Query: 128 QIALAERQY-------NIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 Q + Y ++A L+ M+ T+ + +LY + GD A ++ Sbjct: 39 QALFDQADYWHQRSHDDLARSALQKILMVDANNTKALYLMALY--AQNSGDSAEAAKWRE 96 Query: 179 KALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 + +SP P + L+ ++ A +A + + A Sbjct: 97 RLSKVSPQDPL------------------LQSLDNARQAAAIPQSQ-----LALARQQAR 133 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 G++ AS L + + AA+ ++ R +L + ++ E+ Sbjct: 134 SGNISASLQTWRN---LFSGNQPPAGIAAEYYLTMAGDR---TLLPQA--IDHLRELTAA 185 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 ++T + L E L I+S +A DQA +A+L Sbjct: 186 ----RPQDTSAAVALGKALTYQEPTRREGLQILSGLASGSTDADQAMRQALL 233 >gi|229186635|ref|ZP_04313796.1| TPR domain protein [Bacillus cereus BGSC 6E1] gi|228596894|gb|EEK54553.1| TPR domain protein [Bacillus cereus BGSC 6E1] Length = 219 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEKNPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|256828531|ref|YP_003157259.1| hypothetical protein Dbac_0720 [Desulfomicrobium baculatum DSM 4028] gi|256577707|gb|ACU88843.1| Tetratricopeptide TPR_2 repeat protein [Desulfomicrobium baculatum DSM 4028] Length = 186 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 2/136 (1%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 + + LA K + + + ++ L+ L V A A + A L+ A Sbjct: 45 SGELDLALKAYETAAAKDRSWDQPLINLGNVHSAQA--DWTQAAASYRQALKRNPENSEA 102 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +L + + + A +++KA+ P P + Q E +A+ L++ + Sbjct: 103 MNNLAYALVNLDEPREALEWSSKAVQAEPGNPLFRATLAQALAGTGEREKALALLDETLQ 162 Query: 217 NAKEWNRNRAILLIAR 232 + R + R Sbjct: 163 TLPSDDPLREKIAALR 178 >gi|12711631|gb|AAK01924.1|AF318302_1 CGI-201 protein, short form [Homo sapiens] Length = 687 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 320 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 379 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 380 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 439 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 440 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 498 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 499 RAIYELAI 506 >gi|253998757|ref|YP_003050820.1| hypothetical protein Msip34_1046 [Methylovorus sp. SIP3-4] gi|253985436|gb|ACT50293.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. SIP3-4] Length = 566 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 67/257 (26%), Gaps = 26/257 (10%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF-AVYSLYFESC 165 Q + L+ LL A ML+ P T V + ES Sbjct: 6 QQARQPGQSEMQALIGLLNA------GHMPQAEATARSMLRQYPQTLMLHNVLGIALESQ 59 Query: 166 RIGDLNSAQRYATKALDISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + +A A+ + P + V+ AI + + Sbjct: 60 QKYADAAASY--RSAIALEPKIAEIHFNLGVVLGHL---GRMDEAIASYRKAISLKPDL- 113 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A+ G + ++ + A L Q K A Sbjct: 114 ---AVAYFNLGFALQTLGRYEEAIPSYRKAAAMQPTFYEAHGNLGTVLQKQGKMEDAIAS 170 Query: 283 LEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 K +++ P +A + + + V++ + + + Sbjct: 171 YRKALEIHADPRGYFNLATALRD--HGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQ 228 Query: 339 GSIDQAHAKAMLAMKIA 355 G++D+A A+ + Sbjct: 229 GNMDEAVKAYQQALSLD 245 >gi|218245745|ref|YP_002371116.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|218166223|gb|ACK64960.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] Length = 388 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 71/203 (34%), Gaps = 22/203 (10%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE---- 154 + LA ++ + + + E + L+E A AE+ + + P T + Sbjct: 195 DSDLAEQLAAQLGIPSSNPQEIIDALMEQFQAQAEQDQSQ---------ETPQTEQEWFN 245 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 + E R GDL A +AL+I+P + AI ++ Sbjct: 246 LGL-----EQARQGDLEGAIASWDRALEINPSLAEGWHNRGSALGTLGRFDEAINSFDRA 300 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + +A L +L N + + + ++L++ A + +L Sbjct: 301 IY--LDAQDFQAWNLKGNALYNLQQWE--GAITCWDKALEVRPEFYQAWYNRSSALEELG 356 Query: 275 KKRKAEVILEKIWKVNPHPEIAN 297 + +A K ++ P E+A+ Sbjct: 357 RTEEAIAGYRKALEIEPTFELAS 379 >gi|125555561|gb|EAZ01167.1| hypothetical protein OsI_23195 [Oryza sativa Indica Group] Length = 674 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 90/282 (31%), Gaps = 31/282 (10%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN--IAHEKLE-MMLQIPATRE 154 + AR+++ +E+ L ER A + + ++P + Sbjct: 240 GEVERARRVYERA-ADLLADDEHAEVLFVAFAEFEERCREVERARAVYKYALDRVPKGQA 298 Query: 155 FAVYS--LYFESC--RIGDLNSAQ------RYATKALDISPDAPWVTEAVVQQYVLAKEW 204 +Y L FE G + A +Y + +P ++ Sbjct: 299 EELYRKFLAFEKQFGDRGGIEDAIVGKRRFQY-EDEVRKNPLNYDSWFDYIRLEESVGNK 357 Query: 205 SRAITFLNQKKKNAKEWNRNR-----AILLIARSL-ENADKGDMIASYHDAIESLKLCD- 257 R + N R L I +L E D DM + E LKL Sbjct: 358 DRIREVYERAIANIPPAEEKRYWQRYIYLWINYALYEELDAKDMERTREVYSECLKLIPH 417 Query: 258 ---NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA 314 + AA+ I Q + A IL + P +I Y + E +G +R Sbjct: 418 KKLTFSKVWLMAAQFEIRQKNLKAARRILGNAIGMAPKGKIFKKYIEI--ELYLGNFERC 475 Query: 315 LRLE----EINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 L E + + + + +++ +G D+A + LA+ Sbjct: 476 RTLYEKYIEWSPANCYAWMKYAELEKSLGETDRARSIYELAI 517 >gi|47220645|emb|CAG06567.1| unnamed protein product [Tetraodon nigroviridis] Length = 1868 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 131 LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ++Y A +K E + + +L ++ D A+ +ATKAL++ Sbjct: 1102 EAAQRYQYALKKFPREGFSEDLKTFRELKVSLFLNLSRCRRKMNDFGMAEEFATKALELK 1161 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 P + A + +++++ A+ L + K++ + +L Sbjct: 1162 PKSFEAYYARARAKRSSRQFTEALEDLKEAMKHSPNNREIQRLL 1205 >gi|17137126|ref|NP_477118.1| crooked neck [Drosophila melanogaster] gi|17380353|sp|P17886|CRN_DROME RecName: Full=Protein crooked neck gi|2827496|emb|CAA15705.1| EG:30B8.1 [Drosophila melanogaster] gi|7290299|gb|AAF45760.1| crooked neck [Drosophila melanogaster] gi|15291643|gb|AAK93090.1| LD21701p [Drosophila melanogaster] gi|220944718|gb|ACL84902.1| crn-PA [synthetic construct] Length = 702 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 80/252 (31%), Gaps = 26/252 (10%) Query: 127 VQIALAERQYNIAHEKLEMMLQ---IPATREFAVYSLYFESCRIGDLN-------SAQRY 176 + +++++ A + L T+E + + GD S ++Y Sbjct: 254 ARFEEGQKEHDRARIIYKYALDHLPKDRTQEL-FKAYTKHEKKYGDRAGIEDVIVSKRKY 312 Query: 177 A-TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLI 230 + + +P ++ + + + N N R L I Sbjct: 313 QYEQEVAANPTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWI 372 Query: 231 ARSL-ENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEK 285 +L E + D + L+L + A+ I + ++A L Sbjct: 373 NYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGL 432 Query: 286 IWKVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + P ++ Y L E ++ + E E+ + + +++ +G D Sbjct: 433 AIGMCPRDKLFRGYIDLEIQLREFERCRM-LYEKFLEFGPENCVTWMKFAELENLLGDTD 491 Query: 343 QAHAKAMLAMKI 354 +A A LA++ Sbjct: 492 RARAIFELAVQQ 503 >gi|152976809|ref|YP_001376326.1| TPR repeat-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025561|gb|ABS23331.1| TPR repeat-containing protein [Bacillus cytotoxicus NVH 391-98] Length = 219 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 11/201 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDEKSAT 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y +++ A Q + A ++ + + G+ + Sbjct: 71 AYYGLGNIYYSREQFQEAKAMFEQAMQGGL----QSADIVFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLS 304 + +L + + A+ L ++A+ EK+ +++ E A+ Y ++ Sbjct: 127 QRAAELDEMDVEAAFQCGLCLARLEHVKEAKPYFEKVLQMD--KEHADAYYNLGVAYVFE 184 Query: 305 ENTVGKLKRALRLEEINKESV 325 EN L + +I + Sbjct: 185 ENKEKALALFKKATKIQPDHF 205 >gi|113475008|ref|YP_721069.1| FkbM family methyltransferase [Trichodesmium erythraeum IMS101] gi|110166056|gb|ABG50596.1| methyltransferase FkbM family [Trichodesmium erythraeum IMS101] Length = 415 Score = 40.3 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 3/136 (2%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+ + + A + + Y Q +N L+YLL +I Q + A + ++Q+ Sbjct: 45 GLIEQSQGKLEEATQFYKYAF-QIDSNNISLLYLL-ARITQELNQLDEAINYWQKLVQLK 102 Query: 151 ATREFAVYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 Y + + G + A AL ISP++ +A+ + ++ A Sbjct: 103 PDGTLEFYGNIGNSLVQQGKFDEALNCFRDALKISPNSFQAHQAIGNLLIRKEQLLEAKL 162 Query: 210 FLNQKKKNAKEWNRNR 225 ++ + + + Sbjct: 163 EFSKALEINPNYQTAK 178 >gi|282165353|ref|YP_003357738.1| hypothetical protein MCP_2683 [Methanocella paludicola SANAE] gi|282157667|dbj|BAI62755.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 358 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 7/195 (3%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 RIG+ A KAL++ P + + + +A+ ++ + Sbjct: 124 RIGESEEALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPD----N 179 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + R + +G + S+++ + A I K A +L+K Sbjct: 180 AAAWMGRGEVLSKEGKEAEALECYDRSIRISPDIAGAWYGKGMLFIKGGKYDDALAMLDK 239 Query: 286 IWKVNP-HPEIA--NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 ++ H + LS L ++ E+ S + + + + + + Sbjct: 240 AVEMRDGHADAWFYRGCVLELSGRIREALDCYRKVTELQPGSQAAWFMRGVLLGRLEAYE 299 Query: 343 QAHAKAMLAMKIAPR 357 +A A++I PR Sbjct: 300 EAMPCFDKALEINPR 314 >gi|258404381|ref|YP_003197123.1| TPR repeat-containing protein [Desulfohalobium retbaense DSM 5692] gi|257796608|gb|ACV67545.1| TPR repeat-containing protein [Desulfohalobium retbaense DSM 5692] Length = 208 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 6/154 (3%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 Q A + L+ + P E V L + DL + + +A +I P Sbjct: 40 GQLQEAEDHLKQAIQADPELAEAYVQ-LGGLAMHRNDLAACMSFNQRATEIRPRFAVPQG 98 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + ++ +A+ L + ++ + A L A ++ GD+ + ++ Sbjct: 99 NLGFVHLQQGNVDQAVKHLKRAISLDPQFVQAIATLGNAYLMD----GDVDGCIEENQKA 154 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L A + + + KA ++ Sbjct: 155 IDLQPTFGPAYNNMMLAYMEKGDFAKASAYCKQA 188 >gi|242310515|ref|ZP_04809670.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239522913|gb|EEQ62779.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 431 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 16/141 (11%) Query: 122 VYLLEVQIALAERQYNIAHE----KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 +Y+++ +AL Y A E E+ RE + L D A+ A Sbjct: 46 IYIIQAYVALDMGDYKTARENLQKAYELTKNKEYLRE--IIGLLVL---EKDFLKAKNAA 100 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA------ 231 L +SP+ V +A+V+ + A+ + KN + Sbjct: 101 KDYLKVSPNDEKVRQALVEILGSMGDLQGAVQEVQILLKNNASVQNLEIASSVYFLQKDY 160 Query: 232 -RSLENADKGDMIASYHDAIE 251 R+LE K I ++ Sbjct: 161 SRALEYLQKAYEINKDEKILD 181 >gi|148677249|gb|EDL09196.1| tetratricopeptide repeat domain 21A, isoform CRA_b [Mus musculus] Length = 1282 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A +L+ + L R G L A + A +S P Sbjct: 934 NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 992 Query: 195 VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y + + A+ FLN+ +K++ L ++ D + Sbjct: 993 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1045 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306 A ESL NS A++ Q+ R AE +L + + PH E Sbjct: 1046 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1096 Query: 307 TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357 + K + + + K+S+ +L+ +++ + + + +A + K+ Sbjct: 1097 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1156 Query: 358 ------KEIFLLLAQIEQANSHNTDKILYWTQS 384 ++ +LLLA I D L + Sbjct: 1157 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1188 >gi|221133964|ref|ZP_03560269.1| Thioredoxin domain-containing protein [Glaciecola sp. HTCC2999] Length = 281 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 4/122 (3%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E GD A +A +A I P+ + + + S A L+ + Sbjct: 121 QEKLNEGDAQGALPFAQQAYAIKPENLDCQYMLADCQIDVGQISAAKALLDN--IGLADQ 178 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + +L +E A++ SI A +L + +K +A Sbjct: 179 DNRYTVL--QGKIELAEQAAESPELKALQAQYDADPTDKQISIELAVALHAAHKTEEALG 236 Query: 282 IL 283 +L Sbjct: 237 LL 238 >gi|189346021|ref|YP_001942550.1| hypothetical protein Clim_0478 [Chlorobium limicola DSM 245] gi|189340168|gb|ACD89571.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM 245] Length = 343 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 81/269 (30%), Gaps = 15/269 (5%) Query: 132 AERQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A A E + P+ + L G + A +AL I+ P Sbjct: 72 ASGDVTGAVADYSEALKLDPSLAAASNNRGLAMAKI--GKYHEAVLDYNQALRINAVLPE 129 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 V + + + S A+ N + A+ + + + + D Sbjct: 130 VYNNLGLARIALGDQSGALDDFNTALALKPFYP--EALFNRGCARQKLSE--HREALRDF 185 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLS 304 + + AA S + + A V K ++ P A + + S Sbjct: 186 QQVISFRSGYAEPYFYAALSRSAMGDHKGALVDYTKAIAIS--PSYAEAFAGRALAKIRS 243 Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + G L + + ++ E + + +++ A LA++ L Sbjct: 244 GDYRGALDDYDTVIGLQSDNPELYYNRALVKVKLSDYPGAEIDCSLALERNKVYAEAFFL 303 Query: 365 AQIEQANSHNTDKILYWTQSALHAMPDPL 393 I ++ N + +L + + A +P Sbjct: 304 RGIVRSELGNREGMLADLRFSADAGYEPA 332 >gi|326795290|ref|YP_004313110.1| response regulator receiver [Marinomonas mediterranea MMB-1] gi|326546054|gb|ADZ91274.1| response regulator receiver [Marinomonas mediterranea MMB-1] Length = 555 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 5/106 (4%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 +PW +A++ Y+ + W + L + + ++++ + + + + Sbjct: 175 YSPWCKKALIDAYLGLERWQE-LEVLCKSELEVRDYD----WAWLGLAKLAIARKQWDEA 229 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 LKL +I A+ + K +A+ +LE ++P Sbjct: 230 IKHLEHVLKLFPQAIAGYDLLAECFKEKGKLPEAQKVLEDALSISP 275 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + + A ++ L + P A + + + + + A L + Sbjct: 215 GLAKLAIARKQWDEAIKHLEHVLKLFPQAIAGYDLLAECFKEKGKLPEAQKVLEDALSIS 274 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 ++ + ++ + + GD+ ++ + +LKL Sbjct: 275 PRIHKRQR----DMAVVSMENGDVQSALKASQHTLKLA 308 >gi|331684198|ref|ZP_08384794.1| conserved hypothetical protein [Escherichia coli H299] gi|331079150|gb|EGI50352.1| conserved hypothetical protein [Escherichia coli H299] Length = 1093 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|307181130|gb|EFN68861.1| Tetratricopeptide repeat protein 28 [Camponotus floridanus] Length = 2073 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 68/219 (31%), Gaps = 26/219 (11%) Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 +H+R + +A GL + A + +A + + + FH + L Sbjct: 703 MHQRQLNLARQAADRGLEAAAYGALGIAHRATKNLDKALGFHTQELTL------RQEAGD 756 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCR--IGDLNSAQRYATKALDISPDAPWVTEA 193 + + Y + + L A+ A ++ + A Sbjct: 757 LRGECRAHGNLGAV-HMAL----GQYTHAVKCYQEQLERAKELADSGVEAQ-ALGNLGIA 810 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI + Q+ + A+L R+L N GD + D E++ Sbjct: 811 RLNM----AHYEDAIGYFEQQLATLEPLTTGTALLDKTRALGNL--GDCYEALGDLEEAI 864 Query: 254 K-LCDNSIMASICAA-----KSLISQNKKRKAEVILEKI 286 K A+ + ++ + R+A L + Sbjct: 865 KCHEQQLTAATKLKSIRDQERAYRGLGRAREATGNLPEA 903 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 6/160 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A Y +A L + + ++G +A + A KA +++P P Sbjct: 34 AACQNGDYALAATLYTEALALDPLSHVLYSNRSAARLKMGLFAAALQDAVKATELNPQWP 93 Query: 189 WVT-EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 V L + A+ + + ++ + L+ A Sbjct: 94 KAYYRQGVALQCLGRH-GEALVAFSTGLAHDASNHQLLSGLVEASLKSPLRPTLEPTFQQ 152 Query: 248 DAIESLKLCDN-SIMASICAAKSLISQNKKRKAEVILEKI 286 + ++KL ++ ++ S+ + L + + R A +LE Sbjct: 153 --LRAMKLDESPFVVISVVGQELLGA-GQYRAAAGVLEAA 189 >gi|297624994|ref|YP_003706428.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix DSM 17093] gi|297166174|gb|ADI15885.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM 17093] Length = 357 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 22/271 (8%) Query: 132 AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 A+ A + +L+ A A+ G + + L+ +P+ Sbjct: 37 AQGNCLSARLFYQQVLEREANNPDALLGKGQALVCEGAFDEGIATLQRVLEAAPERTEAY 96 Query: 192 EAVVQQYVLAKEWS---------RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + YV + A+ L + + A LL R + +G++ Sbjct: 97 LRLASAYVEQHRNAPQRHTEGLQEALAVLEEAESAGLGG----AELLNLRGMILYRRGEL 152 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI---- 298 A+ ++ L + + + + A L + +N P+ A+ Sbjct: 153 EAARDALQRAVALDSTAAAYYENLGLTYLGLGELEPAVRTLRRAVTLN--PDSASARNQL 210 Query: 299 -YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +LL L + + E +E+ + + + G + A + + Sbjct: 211 GSAYLLLGRCEDALFELEQAVSLAPEQLETNFNLGRALFDCGEVRAARPYFEKVVALDVT 270 Query: 358 KE--IFLLLAQIEQANSHNTDKILYWTQSAL 386 ++ LA+I+ + + T+ AL Sbjct: 271 ALPPVYTYLARIDLEEGNYDAAVTQATKGAL 301 >gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9] gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9] Length = 1279 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 4/112 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD A T+AL+I+PD P A + AI Q ++ A Sbjct: 593 GDKPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDY----AY 648 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + R + +D D + D ++L + + A + + A Sbjct: 649 IYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYYDLGNYQSA 700 >gi|146099591|ref|XP_001468684.1| hypothetical protein [Leishmania infantum] gi|134073052|emb|CAM71772.1| conserved hypothetical protein [Leishmania infantum JPCM5] gi|322502721|emb|CBZ37804.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 425 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 20/141 (14%) Query: 166 RIGDLNSAQRYATKALDIS-----PDAPWVTEAVVQ---QYVLAKEWSRAITFLNQK--K 215 G + + A A I P +P + +++ + + ++ L Q Sbjct: 258 AAGQVERQLQLAQAAYSIQERRLGPMSPQLAMTLLEVAEAHRVNGDFYNQKALLEQAVEL 317 Query: 216 KNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSI--------MASIC 265 + ++ ++ +L +A + + +E+LK+ A++ Sbjct: 318 QQRAFGQQHTQLIDTYIALGDACGQLENPKSQAQYYLEALKIARQRFQGRHIAIGKAAVS 377 Query: 266 AAKSLISQNKKRKAEVILEKI 286 AA++ +S K KA+ +L++ Sbjct: 378 AARAYLSHGNKAKAQALLDEA 398 >gi|73979998|ref|XP_540128.2| PREDICTED: similar to selective LIM binding factor, rat homolog isoform 1 [Canis familiaris] Length = 1749 Score = 40.3 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 29/176 (16%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 +S+ H ++L E ++ A + P ++F + Sbjct: 1131 ELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIR-AGKPKEAVL----MFFHNQ--- 1182 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +AQR A PD+ V E +++Q A L +K ++ + +L Sbjct: 1183 DWEAAQRVAE---AHDPDS--VAEVLLRQ---------AREALEEK-----DFQKAEGLL 1223 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L R+ + ++L++C + + + A + + +K LE Sbjct: 1224 L--RAQRPGLALNYYKEAGLWSDALRICKDYVPGQLEALQEEYEREATKKGARGLE 1277 >gi|325921459|ref|ZP_08183314.1| tetratricopeptide repeat protein [Xanthomonas gardneri ATCC 19865] gi|325548006|gb|EGD19005.1| tetratricopeptide repeat protein [Xanthomonas gardneri ATCC 19865] Length = 551 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 18/260 (6%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIG 168 +++ + LL +IA ++Y+ A E + P E + + LY + Sbjct: 291 KRNATKPDPDRRLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPE 350 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L A+ A + + A + + + + L Sbjct: 351 ALAEARALQGDASADDDARRDAYVLEAELHQRAGDAPGELDAFERGLAAYPD----DGAL 406 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIW 287 L AR L + D+ + D + L ++ A + + ++A ++++ Sbjct: 407 LYARGLAWERRDDVPRAEADLRKILVAEPENVGALNALGYTLADRTTRYKEALALIDRAR 466 Query: 288 KVNP-HPEI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 +P +P I +Y + + +L+RA L + E V ++ G Sbjct: 467 TADPDNPAIVDSYGWVLYRMGRLKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQ 522 Query: 342 DQAHAKAMLAMKIAPRKEIF 361 D+A A ++ P Sbjct: 523 DEARRYFDEARRLDPDNRAL 542 >gi|322830836|ref|YP_004210863.1| cellulose synthase operon C domain protein [Rahnella sp. Y9602] gi|321166037|gb|ADW71736.1| cellulose synthase operon C domain protein [Rahnella sp. Y9602] Length = 1320 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 8/76 (10%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++ + A+ + + T LLE ++A A+ + A +L+ Sbjct: 755 VALGEGDNQRAKTLMEGLRGPRTPDR----LLLEARVAEAQGDHQQAL----ALLRSAKG 806 Query: 153 REFAVYSLYFESCRIG 168 + + ++ G Sbjct: 807 KMIGLEGTDSQAQVAG 822 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 33/290 (11%), Positives = 81/290 (27%), Gaps = 54/290 (18%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y L + + + A + ++Q + LL I + A ++ Sbjct: 349 YAQLAKAKDAAGSGSYDAALAAVTPLTQVGGEKGQSAS-LLRADILRRKGDLAGAEQQYS 407 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + R LY+ V++Q E Sbjct: 408 ALGDNADARA----GLYY-------------------------------VLRQQNKTAEA 432 Query: 205 SRAITFLNQKKKNAKEWNRNRAIL--LIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 S+ + L + ++ + ++ + D + + ++ + +++ Sbjct: 433 SQVLKTLPAGIQAKMNPPTVADVIEPMRRQAAQAVANNDPQRALNILQQARERQPSNVWV 492 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 + A+ L SQ + +A+ I+ P A++Y L + A L Sbjct: 493 KLDMARILQSQGQTAQAQSIM--APSARPGASSADLYAAALFASETKNWSTANALLSRIP 550 Query: 323 E--------------SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 + + + ++ L+ G+ A + P Sbjct: 551 RSSQNQGMRELAQRANFNAQMADAESYLQQGNAAAASNTLRALAQNPPAA 600 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 36/282 (12%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI-SPDA 187 AL N A K E +L A+ L + + R G+ A +Y +KA P++ Sbjct: 277 TALNSGDVNSAKAKFESVLADNPNDADALAGLGYIAQRSGNFEQASQYLSKAAAQGGPNS 336 Query: 188 P----WVTEAVVQQYVLA-------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 ++ + + A+ + + E ++ ++L R+ Sbjct: 337 AQLSNQAQDSAFYAQLAKAKDAAGSGSYDAALAAVTPLTQVGGEKGQSASLL---RADIL 393 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK-----IWKVNP 291 KGD+ + D A L QNK +A +L+ K+NP Sbjct: 394 RRKGDLAGAEQQYSALGDNAD----ARAGLYYVLRQQNKTAEASQVLKTLPAGIQAKMNP 449 Query: 292 HPEIAN--------IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 P +A+ + + + L + E +V + +++I G Sbjct: 450 -PTVADVIEPMRRQAAQAVANNDPQRALNILQQARERQPSNVWVKLDMARILQSQGQ--T 506 Query: 344 AHAKAMLAMKIAPRKEIFLL-LAQIEQANSHNTDKILYWTQS 384 A A++++A P L A + + + N Sbjct: 507 AQAQSIMAPSARPGASSADLYAAALFASETKNWSTANALLSR 548 >gi|317485897|ref|ZP_07944756.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] gi|316922819|gb|EFV44046.1| tetratricopeptide [Bilophila wadsworthia 3_1_6] Length = 803 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 2/78 (2%) Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANS 372 ++ S ++++AL +G DQA A+ PR L+A + Sbjct: 694 FESAAALDTGSPLPYRHLARLALRLGKADQAREHLHQALLRNPRDVAALSLMADLYLDGG 753 Query: 373 HNTDKILYWTQSALHAMP 390 + + A+ Sbjct: 754 EDPELAES-LARQSVALR 770 Score = 38.8 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 7/199 (3%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ 148 G+ + AR+ Q+ T + L Y L + + A E ++ Sbjct: 608 SLGVCLASLGRHAEARRFFEEAIQR-TPDDPALAYNLGA-VCQSLHDNEAAAEHFRTCIR 665 Query: 149 IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI 208 + + +A+ L L A+ A + +P + + + + +A Sbjct: 666 LSPSHLYALIRLGQLDEAEERLEEARARFESAAALDTGSPLPYRHLARLALRLGKADQAR 725 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKG-DMIASYHDAIESLKLCDNSIMASICAA 267 L+Q L + D G D + A +S+ L + + Sbjct: 726 EHLHQALLRNP----RDVAALSLMADLYLDGGEDPELAESLARQSVALRPEYRNGWLVLS 781 Query: 268 KSLISQNKKRKAEVILEKI 286 ++L Q + A L K Sbjct: 782 RALEVQGRLSDAREALLKA 800 Score = 36.8 bits (84), Expect = 8.9, Method: Composition-based stats. Identities = 24/223 (10%), Positives = 54/223 (24%), Gaps = 38/223 (17%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 ++ A E +Q Y+L + D +A + + +SP + Sbjct: 617 GRHAEARRFFEEAIQRTPDDPALAYNLGAVCQSLHDNEAAAEHFRTCIRLSPSHLYALIR 676 Query: 194 VVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + Q + A + G + + Sbjct: 677 LGQLDEAEERLEEARARFESAAALDTGSPLPYRH------LARLALRLGKADQAREHLHQ 730 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKL 311 +L + A A + + PE+A Sbjct: 731 ALLRNPRDVAALSLMADLYLDGGED----------------PELAE-------------- 760 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 A + + E +++S+ G + A + A ++ Sbjct: 761 SLARQSVALRPEYRNGWLVLSRALEVQGRLSDAREALLKAGEL 803 >gi|268317778|ref|YP_003291497.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus marinus DSM 4252] gi|262335312|gb|ACY49109.1| Tetratricopeptide TPR_2 repeat protein [Rhodothermus marinus DSM 4252] Length = 711 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 39/106 (36%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LLE + + Y A + E +L+ + +A+ +G L+ A +AL Sbjct: 7 TRLLEGEDLFLKGAYPQALQTFEAVLEEDPSNPYALNDAGLAYAELGQLDRAVECFERAL 66 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 P ++ Q + ++ A+ + ++ + + R Sbjct: 67 QADPGHENAFFNLIDQLLRYNQFDLAVETFLRYQEAIPDSEQKRKY 112 >gi|218899564|ref|YP_002447975.1| TPR domain protein [Bacillus cereus G9842] gi|228902923|ref|ZP_04067064.1| TPR domain protein [Bacillus thuringiensis IBL 4222] gi|228967470|ref|ZP_04128499.1| TPR domain protein [Bacillus thuringiensis serovar sotto str. T04001] gi|218543720|gb|ACK96114.1| TPR domain protein [Bacillus cereus G9842] gi|228792247|gb|EEM39820.1| TPR domain protein [Bacillus thuringiensis serovar sotto str. T04001] gi|228856707|gb|EEN01226.1| TPR domain protein [Bacillus thuringiensis IBL 4222] Length = 219 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|153006901|ref|YP_001381226.1| protein kinase [Anaeromyxobacter sp. Fw109-5] gi|152030474|gb|ABS28242.1| protein kinase [Anaeromyxobacter sp. Fw109-5] Length = 863 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 6/115 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R G A +AL + P WV ++ A W A+ + Sbjct: 503 RFGGRERAVELYDRALVLDPGQCWVAGRLIGALRDAGRWDEAMEVARRAASVNPIAENVG 562 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + L+ + + A ++L+ A++ +A +L +AE Sbjct: 563 TLALLQ------AREHRTEAVETARQALRAEREPGEAALVSACALGLAGHVEEAE 611 >gi|329893837|ref|ZP_08269908.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088] gi|328923436|gb|EGG30751.1| hypothetical protein IMCC3088_2332 [gamma proteobacterium IMCC3088] Length = 698 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 54/216 (25%), Gaps = 31/216 (14%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL--YFESCRIGDLN-------S 172 V L Q R A L + +GD + Sbjct: 486 VNLSTAQAQQLR-------------TLDTEYRAIAERHLDQAEQHLSLGDYETRQGNIEA 532 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A R AL +P + AI L + + L A Sbjct: 533 ALRRYQTALTKNPQLLAAYINKADVEANSGNNQEAINTLERGLTQIADNPD----LAFAL 588 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI---WKV 289 L + D + K S A +L Q K A L + W Sbjct: 589 GLAHIRNQDYRQGLTQLASAAKA--ESARYRYTYAIALHGQGKLHDAIRTLRGVSRKWPN 646 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESV 325 N A + +++T L+ +L E+ + Sbjct: 647 NEEALQALVQFAAEADDTRTALEAVRQLTELAPNNR 682 >gi|288958255|ref|YP_003448596.1| methyltransferase [Azospirillum sp. B510] gi|288910563|dbj|BAI72052.1| methyltransferase [Azospirillum sp. B510] Length = 450 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 10/216 (4%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D A R A+ P A+ + + S R L Sbjct: 31 DHVGAARAFRVAVTTDPRNGEAWSALAEAGGAEEPASHVAACFQHAVILDPGNWTWR--L 88 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 ++A +L + D + A+ + + +S A + A+ L + + +A + Sbjct: 89 MLADALRQCGEIDAAYALFRALAADRS--DSAPARLGLARCLGALGRPEEALEEYREAVA 146 Query: 289 VNPHPE---IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 + P +A S + + ++ L +E+ + + L + +A Sbjct: 147 LRPSDSESVLALAEALTASGDALAAVELLQPLSRQFEEAASVHHALGRCWLALREPVKAL 206 Query: 346 AKAMLA---MKIAPRKEIFLLLAQIEQANSHNTDKI 378 A A + I L+A +E + Sbjct: 207 AALRHARDIAEGDEAAAIDRLIAALEAGEGADLSAA 242 Score = 38.8 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 55/189 (29%), Gaps = 22/189 (11%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L+ + + A+ + + A L +G A +A+ Sbjct: 87 RLMLADALRQCGEIDAAYALFRALAADRSDSAPARLGLARCLGALGRPEEALEEYREAVA 146 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLN-QKKKNAKEWNRNRAILLIARSLENADKGD 241 + P A+ + + + A+ L ++ + + + A+ +L Sbjct: 147 LRPSDSESVLALAEALTASGDALAAVELLQPLSRQFEEAASVHHALGRCWLAL------- 199 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 A+ +L+ + I++ + A L + +++ Y Sbjct: 200 --REPVKALAALRHARD------------IAEGDEAAAIDRLIAALEAGEGADLSAAYVR 245 Query: 302 LLSENTVGK 310 L + + Sbjct: 246 ALFDRYADR 254 >gi|312116240|ref|YP_004013836.1| cytochrome C family protein [Rhodomicrobium vannielii ATCC 17100] gi|311221369|gb|ADP72737.1| cytochrome C family protein [Rhodomicrobium vannielii ATCC 17100] Length = 768 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 22/185 (11%), Positives = 58/185 (31%), Gaps = 9/185 (4%) Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 L+ + R A L+A + ++ + +E+ +L +++ Sbjct: 533 RLLSPVMGDPARAVRTEAARLLASANPAERSEPFRSALKEWVEAEQLASERPESALNLGV 592 Query: 269 SLISQNKKRKAEVILEKIWKVNP-----HPEIANIY-THLLSENTVGKLKRALRLEEINK 322 KAE L + +P +A++Y + L+++ Sbjct: 593 LWAELGDAEKAEATLRSAIEEDPSFTAGAITLADLYRAEGRNGEAEQVLRKS---AAAAP 649 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWT 382 + ++ ++ + G +A + A ++P + F + + + Sbjct: 650 RAGDARYALALTLIRQGRRAEARTELERAATLSPEEPRFAYAYGLALWEDGDRALAIDIW 709 Query: 383 QSALH 387 Q A Sbjct: 710 QKASR 714 >gi|197105773|ref|YP_002131150.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1] gi|196479193|gb|ACG78721.1| DNA uptake lipoprotein [Phenylobacterium zucineum HLK1] Length = 305 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 33/220 (15%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVV---QQYVLAKEWSRAITFLNQKKK----- 216 G N A Y + P + W +++ + + ++ AI ++ + Sbjct: 51 LDRGLWNQAINYFQEVERQHPYSEWSRRSILMQAYAHYQSNDYPEAIGDADRFIQLYPGN 110 Query: 217 -NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA--AKSLISQ 273 A + +AI + D G A+ A+E+L+ AS A A+ I Sbjct: 111 PAAAYAHYIKAICYFEQ---IVDVGRDQAATGQALEALRAVVQRYPASEYAQDARLKIDM 167 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRL---EEINKESVESLVI 330 + A + + Y L + +T+ + R + + + E+L Sbjct: 168 VNDQLAGKEMT----------VGRWY--LRNGDTLAAVNRFKTVVDRYQTTTHTPEALYR 215 Query: 331 VSKIALEMGSIDQAHAKAMLAMKIAP----RKEIFLLLAQ 366 + + L +G ++A + P ++ + LL Sbjct: 216 LVEAYLTLGLTEEAKRNGAVLGYNYPGDPWYRDAYRLLTD 255 >gi|222056065|ref|YP_002538427.1| hypothetical protein [Geobacter sp. FRC-32] gi|221565354|gb|ACM21326.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. FRC-32] Length = 599 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 9/164 (5%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPAT 152 + A N K + + L Q L Q A K L+ Sbjct: 419 LNAGNKD--NKAAMAAFTEAARNKPDYAPALYAQGVLLDQSGQKKEAAAKYRAALEKSEN 476 Query: 153 REFAVYSLYFE-SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ +L + G L+ A+R A +A + P P V E + + + A+ L Sbjct: 477 YVQALNNLACLYADGYGSLSEAERLAMRAYKLQPSNPAVMETLGYVLLKNGQKPHALELL 536 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + + + L +L + G+ + + ++L+L Sbjct: 537 QKAAERLPNNGYAQYHL----ALALMETGNEVQAGLKLKKALQL 576 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 57/188 (30%), Gaps = 16/188 (8%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + AI L + E+ R +L + + ++ L+ Sbjct: 32 QIGKGNAGGAIVLLKNALEKDPEYLSAR----YQLALAYVKANKHEQAEKEFLQVLEQNP 87 Query: 258 NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-----IANIYTHLLSENTVGKLK 312 + A+ + K +A +E+ K N I Y + + Sbjct: 88 AKSTVHLDLARLYNTMGKPEQARAEVEEYLKSNGRTAEALGLIGESYALQKNLEQAERY- 146 Query: 313 RALRLEEINKESVES--LVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLLLAQIEQ 369 L+ + ++ + + ++ I + +A + + + P+ L+A +E Sbjct: 147 ---LLQSMQGDTKNTGVKLALAGIYMAWRKHPEARRQLEETLAMEPKNSKACYLMAALEN 203 Query: 370 ANSHNTDK 377 ++ Sbjct: 204 TMGNSDRA 211 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 15/192 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-- 191 + A E + + A Y + D+ A++ A + PD + Sbjct: 206 GNSDRALELYQQIAGFDKADPVAPYKMGLVYLDKHDVEKARKLAAYLVKTFPDKGEGSRL 265 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 + +VQ Y ++ AI L + K + L G++ + Sbjct: 266 QGLVQYYTKN--YTEAIALLQESLKKQPSMEGYYFLGLSLYC-----HGELENALSQFRR 318 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIY-THLLSE 305 + + + A + + L+ Q + A + K+ +++P H + Y ++E Sbjct: 319 IIDYNPSFVQARVLNSLILLRQGRADDAIGEIRKVLQIDPGHAFAHNVLGRGYLAKGMNE 378 Query: 306 NTVGKLKRALRL 317 V +LK A L Sbjct: 379 EGVRELKAATGL 390 Score = 36.5 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 71/240 (29%), Gaps = 21/240 (8%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK---------- 214 R G + A K L I P + + + Y+ + L Sbjct: 338 LRQGRADDAIGEIRKVLQIDPGHAFAHNVLGRGYLAKGMNEEGVRELKAATGLGPTATGD 397 Query: 215 -KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K E ++ L+ NA D A+ E+ + + A L Sbjct: 398 MLKRGGEGDQWNIETLMILGDLNAGNKDNKAAMAAFTEAARNKPDYAPALYAQGVLLDQS 457 Query: 274 NKKRKAEVILEKIWK-----VNPHPEIANIYTHLLSE-NTVGKLK-RALRLEEINKESVE 326 +K++A + V +A +Y + +L RA +L+ N +E Sbjct: 458 GQKKEAAAKYRAALEKSENYVQALNNLACLYADGYGSLSEAERLAMRAYKLQPSNPAVME 517 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 + + + L+ G A A + P + + N + + AL Sbjct: 518 T---LGYVLLKNGQKPHALELLQKAAERLPNNGYAQYHLALALMETGNEVQAGLKLKKAL 574 >gi|62089254|dbj|BAD93071.1| DnaJ (Hsp40) homolog, subfamily C, member 7 variant [Homo sapiens] Length = 483 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 168 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 225 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 226 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 285 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 286 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 345 Query: 289 VN 290 Sbjct: 346 TE 347 >gi|109898893|ref|YP_662148.1| response regulator receiver protein [Pseudoalteromonas atlantica T6c] gi|109701174|gb|ABG41094.1| response regulator receiver protein [Pseudoalteromonas atlantica T6c] Length = 547 Score = 40.3 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 54/150 (36%), Gaps = 10/150 (6%) Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLIS 272 + +K +++ A+ + +++ + D IA+ + + A+ Sbjct: 120 NLRLSKAYHKRIALRSVYDAMQKNNTPDAIAACRKLIMSGTRYAKT---CCRLLAELYWK 176 Query: 273 QNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + +A+ +L + P P +A +L + + + A + N E+ Sbjct: 177 AGEYSQAKHMLTPLLAQKPQPWVSIALAKTDMYLTNYDAA--IALAQDVSLRNPMLFEAQ 234 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 I+++ L A A++IAP Sbjct: 235 DILAQCYLLQHDYPSALIAIERAIEIAPYS 264 >gi|330824210|ref|YP_004387513.1| ParB domain-containing protein nuclease [Alicycliphilus denitrificans K601] gi|329309582|gb|AEB83997.1| ParB domain protein nuclease [Alicycliphilus denitrificans K601] Length = 683 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 17/230 (7%) Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 TR + + E+C D A++ + + + +A+ +E + AI Sbjct: 329 ETRLEKIDAELEEACDAEDEAKAEKLEQRRDQVVGELQDAEDALHGYAPDVREVAGAIVT 388 Query: 211 LNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +++ + R A R+LE +G A + + D++ A+ + + Sbjct: 389 IDRNGEAVIHRGLLREAEAKALRTLEKLRRGFGSTEGEAANDEHEDADDAPKAASLSDRL 448 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG-----------KLKRALRLE 318 + R A + +E +PH +A + ++ LK RLE Sbjct: 449 AQWLSAHRTAALQIEVA--RHPHVALAALVHGMVQTVLQESHYGHDLPLGVSLKVQDRLE 506 Query: 319 EINKESVESLVIVSKIAL---EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ES V+ L ++ + +A+ A+ P+ E+ LLA Sbjct: 507 GMAPDWPESPAAVALRELQQVAGEALPEDNAELFAALLAKPQDELVRLLA 556 >gi|297623488|ref|YP_003704922.1| tetratricopeptide repeat-containing protein [Truepera radiovictrix DSM 17093] gi|297164668|gb|ADI14379.1| Tetratricopeptide TPR_2 repeat protein [Truepera radiovictrix DSM 17093] Length = 1025 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 49/249 (19%) Query: 127 VQIALAERQYNIAHEKLEMM------LQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 + ++ Q++ A EM+ L+ P + A L + GD A +A Sbjct: 486 ARAHMSLGQFSAAARAFEMVQRVGDELRDPYFKALATRGLAAHAEYTGDTQRALLLNQQA 545 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 L W + + + + A+ L L + G Sbjct: 546 LGF-----W------EACGNSYQITGALNSL----------------AACYYDLGELEAG 578 Query: 241 DMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 ++ L + + L++ + +A E +P A+ Sbjct: 579 LSAGLRALSLW-NDLALDESPVLLHCTLGDLLLALGRPEEAARHFEAALHGSPTDAFAHA 637 Query: 299 YT--------HLLSENTVGK--LKRALRLEEINKESV-ES--LVIVSKIALEMGSIDQAH 345 Y L K +RAL L + E +++++A G+ +A Sbjct: 638 YALVGRGRLFSLEGGEARAKTYAERALELALAHGFRFCEGLARTLLAQLAALQGARAEAA 697 Query: 346 AKAMLAMKI 354 + A ++ Sbjct: 698 EQLGAAERL 706 >gi|187939572|gb|ACD38718.1| tetratricopeptide repeat protein [Pseudomonas aeruginosa] Length = 502 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 53/191 (27%), Gaps = 15/191 (7%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + D A R + A + P + W RAI + R Sbjct: 279 APSLNDPVRAVRLSA-AYALLPAIAELG-------THGTAWRRAIDEYEGAQ----LVQR 326 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 RA + + G E+L+ + A + + L + + +A +L Sbjct: 327 ERAEANLNLANLYRADGRSGLVEASLREALRRDADFAPARVALGQWLENAGRDSEAVTLL 386 Query: 284 EKIWKVNPHPEI---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 + + P + A + + ++ +++ E G Sbjct: 387 HEGIRRQPQSGLLHYARGLALIRQGKREAARQALAEALAAEPDNPRYPYVLAVAWHETGQ 446 Query: 341 IDQAHAKAMLA 351 D+A Sbjct: 447 PDKAIETLRAL 457 >gi|94267075|ref|ZP_01290714.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] gi|93452212|gb|EAT02868.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1] Length = 212 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 8/163 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + A +LE LQ+ + + +L GDL A +A+ + P+ Sbjct: 42 AGRIDEAIARLEKCLQLDEHAKEPLINLGAIYFEQGDLERALEANRRAVKVMPELAQAHT 101 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + +++ A+ Q ++ + + + G+ + A E+ Sbjct: 102 NIGLILQQQGKFAEAVAAYEQALQHDP----KQVNAWVNMATTQIADGNFELAAKAAREA 157 Query: 253 LKLCDNSIMA--SICAAKSLISQNKKRK--AEVILEKIWKVNP 291 +KL MA ++ A Q ++ K A+ E ++V+P Sbjct: 158 IKLEPQFGMAHNNLAVALFYQQQYQEAKEAADKARELGYQVDP 200 >gi|12853191|dbj|BAB29674.1| unnamed protein product [Mus musculus] Length = 1314 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A +L+ + L R G L A + A +S P Sbjct: 966 NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024 Query: 195 VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y + + A+ FLN+ +K++ L ++ D + Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306 A ESL NS A++ Q+ R AE +L + + PH E Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128 Query: 307 TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357 + K + + + K+S+ +L+ +++ + + + +A + K+ Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188 Query: 358 ------KEIFLLLAQIEQANSHNTDKILYWTQS 384 ++ +LLLA I D L + Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220 >gi|26325882|dbj|BAC26695.1| unnamed protein product [Mus musculus] Length = 1314 Score = 40.3 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A +L+ + L R G L A + A +S P Sbjct: 966 NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024 Query: 195 VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y + + A+ FLN+ +K++ L ++ D + Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306 A ESL NS A++ Q+ R AE +L + + PH E Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128 Query: 307 TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357 + K + + + K+S+ +L+ +++ + + + +A + K+ Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188 Query: 358 ------KEIFLLLAQIEQANSHNTDKILYWTQS 384 ++ +LLLA I D L + Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220 >gi|313200841|ref|YP_004039499.1| hypothetical protein MPQ_1099 [Methylovorus sp. MP688] gi|312440157|gb|ADQ84263.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688] Length = 566 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 67/257 (26%), Gaps = 26/257 (10%) Query: 108 SYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PATREF-AVYSLYFESC 165 Q + L+ LL A ML+ P T V + ES Sbjct: 6 QQARQPGQSEMQALIGLLNA------GHMPQAEATARSMLRQYPQTLMLHNVLGIALESQ 59 Query: 166 RIGDLNSAQRYATKALDISPDAPWVT---EAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + +A A+ + P + V+ AI + + Sbjct: 60 QKYADAAASY--RSAIALEPKIAEIHFNLGVVLGHL---GRMDEAIASYRKAISLKPDL- 113 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A+ G + ++ + A L Q K A Sbjct: 114 ---AVAYFNLGFALQTLGRYEEAIPSYRKAAAMQPTFYEAHGNLGTVLQKQGKMEDAIAS 170 Query: 283 LEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 K +++ P +A + + + V++ + + + Sbjct: 171 YRKALEIHADPRGYFNLATALRD--HGQLEDAVTAYRSALRMQPDYVDAWNNLGEALRDQ 228 Query: 339 GSIDQAHAKAMLAMKIA 355 G++D+A A+ + Sbjct: 229 GNMDEAVKAYQHALSLD 245 >gi|296804964|ref|XP_002843309.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480] gi|238845911|gb|EEQ35573.1| DnaJ domain-containing protein [Arthroderma otae CBS 113480] Length = 520 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 75/277 (27%), Gaps = 38/277 (13%) Query: 107 HSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAV--YSLYFE 163 + + + + LL + LA A + + + + Sbjct: 18 ANGLQASDIPPDTPVSSLLSSAKTHLANGSPKDALLYFDAAITKDPSNYLTIFQRG--AA 75 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 +G + A + L + P + + + W+ A L K Sbjct: 76 YLSLGRHSRAAEDFNQVLKLKPGFEGALLQRGKLRMRSGNWTGAKEDLEA---TGKPGEA 132 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A L A++ + + A C + +I A + R Sbjct: 133 ELAQLHEAQAAVAHAE-EADKKQDWAT-----CVSQSSVAIMKAMGSAELRRLR------ 180 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSID 342 A Y L + + RL +++ V+ + + + + + Sbjct: 181 ------------AKCY--LERGDIQEAINDLTRLTQLSPNVVQPHLQISAMLFYSQADTE 226 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 + + + P ++ ++ + N+ +I Sbjct: 227 RGMDQIRKCLHSDPDSKVCS---RLFRGEKRNSKQIK 260 >gi|163794033|ref|ZP_02188006.1| hypothetical protein BAL199_01429 [alpha proteobacterium BAL199] gi|159180647|gb|EDP65166.1| hypothetical protein BAL199_01429 [alpha proteobacterium BAL199] Length = 935 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 9/166 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 +E Q A E L + + L F ++G+ A + ++ ++ Sbjct: 8 IEAQARYRAGDLLGAKVLFESALADDPNHWASRHDLGFLLRQLGERAGAFHHIRASIALA 67 Query: 185 PDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P+ W T ++ A + A +++ + A L+ L + D+ Sbjct: 68 PEHAVGWTTAGLLSG--DAGSFQTARRSIDRARLIAPT---EPTALIAQADLADDDECPT 122 Query: 243 IASYHDAIESLKLCDNSIMASICAA--KSLISQNKKRKAEVILEKI 286 A+ A + + A + A + L ++ + Sbjct: 123 FAAQLSARLRQSGLPDRLRARLLHALGRVLDRLGDTQQGFAAVSAA 168 Score = 36.8 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 12/211 (5%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 + L A + Q+ +A L + +L R+G+ +A Sbjct: 497 LLAADPRSLFLAAASAERQSQWMLARTFLRSAARAAPGVAAIYTNLAVAHGRLGETAAAT 556 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 +AL ++P+AP + + ++ +W RA + A L + + Sbjct: 557 DALRRALSLTPNAPEAA-SNLGNFLAPHDWPRA----ATSHRRATMLTPADPGLYVNLGM 611 Query: 235 ENADKGDMIASYHDAI-ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-- 291 + + + A+ ++ L S A + + A L+++ P Sbjct: 612 TLMREAAAVPATERALHRAIALDPTSQSAGLSLYHLESATEHPEVALTRLDRLRCAQPTV 671 Query: 292 ---HPEIANIYTHL-LSENTVGKLKRALRLE 318 H E + L+RA+ L Sbjct: 672 GEVHYERGCALRDANRDHDAADSLRRAIVLA 702 >gi|225543311|ref|NP_083011.2| tetratricopeptide repeat protein 21A [Mus musculus] gi|150416165|sp|Q8C0S4|TT21A_MOUSE RecName: Full=Tetratricopeptide repeat protein 21A; Short=TPR repeat protein 21A; AltName: Full=Tetratricopeptide repeat-containing hedgehog modulator 2 Length = 1314 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A +L+ + L R G L A + A +S P Sbjct: 966 NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024 Query: 195 VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y + + A+ FLN+ +K++ L ++ D + Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306 A ESL NS A++ Q+ R AE +L + + PH E Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128 Query: 307 TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357 + K + + + K+S+ +L+ +++ + + + +A + K+ Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188 Query: 358 ------KEIFLLLAQIEQANSHNTDKILYWTQS 384 ++ +LLLA I D L + Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220 >gi|148658699|ref|YP_001278904.1| hypothetical protein RoseRS_4623 [Roseiflexus sp. RS-1] gi|148570809|gb|ABQ92954.1| hypothetical protein RoseRS_4623 [Roseiflexus sp. RS-1] Length = 336 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 39/196 (19%) Query: 252 SLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 S + + ++A AA I K + + +L + ++NPH E+A ++ L E Sbjct: 2 SHSVSPDVHRLVADAIAA---IRSGDKARGQKLLMQALRINPHHEVAWLWMASLVETPER 58 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQ 369 + + R IN + E+ ++ AL S Q P++ + ++Q Sbjct: 59 RRECLERALAINPHN-ET----ARRALRALSEPQP-------PHATPQQHV----DALDQ 102 Query: 370 ANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPLSPISKT-------LCYFEWKI 422 + + Q+A A DD P C F K Sbjct: 103 TFHSSPTSVHEHVQTATQANR----TQDDQARH------CPHCGAPLETTATFCAFC-KS 151 Query: 423 PTKSPEYISSENINFS 438 P + +++ + Sbjct: 152 PVAPHPASDAPSLSLT 167 >gi|67626016|gb|AAY78492.1| tetratricopeptide repeat-containing hedgehog modulator 2 [Mus musculus] gi|126632017|gb|AAI33700.1| Tetratricopeptide repeat domain 21A [Mus musculus] Length = 1314 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 41/273 (15%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A +L+ + L R G L A + A +S P Sbjct: 966 NYETAINLYHQVLEKAPDNFLVLNKLVDLLRRSGKLEEAPAFFELAKKVSSRVPLEPGF- 1024 Query: 195 VQQYVLA------KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 Y + + A+ FLN+ +K++ L ++ D + Sbjct: 1025 --NYCQGIYFWHIGQPNEALRFLNKARKDSTWGQ-----LATCYMVQICLNPDNEIVGGE 1077 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI--YTHLLSEN 306 A ESL NS A++ Q+ R AE +L + + PH E Sbjct: 1078 AFESLVGDSNS------ASRKESQQHGVRTAEKLLREFY---PHSESGQTQLRLLQNLCL 1128 Query: 307 TVGKLKR--------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357 + K + + + K+S+ +L+ +++ + + + +A + K+ Sbjct: 1129 LATREKANVEVALGAFIEMAQAEKDSIPALLAMAQAYILLKQVPKARTQLKRLAKVPWTV 1188 Query: 358 ------KEIFLLLAQIEQANSHNTDKILYWTQS 384 ++ +LLLA I D L + Sbjct: 1189 DEAEDLEKSWLLLADI-YCQGGKFDLALELLRR 1220 >gi|50417750|gb|AAH77978.1| LOC446236 protein [Xenopus laevis] Length = 938 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 12/231 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS---AQRYATKALDISPDAPWV 190 + + A L + T A+ L + +S + +KA I P P V Sbjct: 212 NKLDKARLAFGRALDLNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMV 271 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + K++S+ + L + E +A + + D ++ Sbjct: 272 LNHLANHFFFKKDYSK-VQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYY 330 Query: 251 ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304 ++ + + ++ + I + K A EK+ K P+ + ++Y Sbjct: 331 QATQFAAASFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDD 390 Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + K ++ E + VE+ + +++I LE I A + A +I Sbjct: 391 QEKRDIAKSHLKKVTEQYPDDVEAWIELAQI-LEQTDIQNALSAYGTATRI 440 >gi|52141112|ref|YP_085717.1| TPR repeat-containing protein [Bacillus cereus E33L] gi|51974581|gb|AAU16131.1| TPR domain protein (tetratricopeptide repeat family protein) [Bacillus cereus E33L] Length = 219 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQVGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|34540757|ref|NP_905236.1| TPR domain-containing protein [Porphyromonas gingivalis W83] gi|34397071|gb|AAQ66135.1| TPR domain protein [Porphyromonas gingivalis W83] Length = 670 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 63/202 (31%), Gaps = 17/202 (8%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER---QYNIAHEKL-EMMLQIPA- 151 H+ A + + L + Y+ A + P Sbjct: 400 CHDYDRAEAYYKRA----LEADPNHANTLGNYALFLKDVRHDYDQAEAYYKRALAADPNH 455 Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-AKEWSRAITF 210 Y+ + + R D + A+ Y KAL+ P+ ++ +A + Sbjct: 456 ANNLGNYANFLYNIRC-DYDQAETYYKKALEADPNHANTLGNYANFLCDIRHDYDQAEGY 514 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSIMASICAAKS 269 + E + AI L +L D + +L++ S A Sbjct: 515 YKKAL----EADPKNAITLGNYALFLNDIRHAYDQAEAYYKRALEVDPKSANKLGNYAHF 570 Query: 270 LIS-QNKKRKAEVILEKIWKVN 290 LI+ + ++A+ ++++ ++ Sbjct: 571 LITCRGDFKRADSLIQQAFENA 592 >gi|116622596|ref|YP_824752.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116225758|gb|ABJ84467.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] Length = 375 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 69/203 (33%), Gaps = 11/203 (5%) Query: 160 LYFESC---RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 L + + GD+ A L SP+ + + + A T +K Sbjct: 30 LLRHAIELHQAGDIPGAIEEYRAFLKQSPNNVMARSNLGAALSKSGRYEEA-TVEYRKAL 88 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + + N + L +L + + + +++K + A A + + Sbjct: 89 DLEPRNLPVRVNL---ALAYYKTAQIADAAEELTKAVKQGPPNRQAIFLLADCDLRLGEN 145 Query: 277 RKAEVILEKIWKVNPHPEIANIYT---HLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 +K +L + K +P+ + A +Y L+ +N + + + ES E+ +++ Sbjct: 146 KKVIELLSPLEKESPN-DKALVYLLGTALIRDNQPARGQLLVDRILREGESAEAHLLLGT 204 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 + A A + P Sbjct: 205 TKMNAQEFAGALVDLKKAADLNP 227 >gi|301310686|ref|ZP_07216625.1| TPR domain protein [Bacteroides sp. 20_3] gi|300832260|gb|EFK62891.1| TPR domain protein [Bacteroides sp. 20_3] Length = 707 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 45/129 (34%), Gaps = 6/129 (4%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + +S + A K L+ P+ + + ++ K+++ A + + Sbjct: 97 RGIARQSQEK--YDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFD----D 150 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + ++ + R +KGD + + D +++++ A A + + Sbjct: 151 LMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYK 210 Query: 278 KAEVILEKI 286 A L + Sbjct: 211 DALADLNEA 219 >gi|239997002|ref|ZP_04717526.1| Response regulator with TPR repeat [Alteromonas macleodii ATCC 27126] Length = 546 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 66/173 (38%), Gaps = 14/173 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS----LYFESC-RIGDLNSAQRYA 177 +L + + + + N A + +E +L P+ L E RI + A Sbjct: 132 FLQQAFSLVEQGEINSAIDHIEALLDAPSH----YKGHCEQLLVELYWRIKQPDKALDVL 187 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +D P W A+ + Y+L KE+ +AI + K + A ++A++ + Sbjct: 188 RDYIDGKPVL-WAQIAIGKTYLLLKEYEKAILIAKRTLKRNRF--NADAHDILAQAHQAT 244 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 GD + E++KL S+ A + + A + IW ++ Sbjct: 245 TSGD--RALDAIKEAIKLSPYSLPRHFKACEIGRQNDDLVLAASSSQAIWDLS 295 >gi|149923302|ref|ZP_01911711.1| TPR repeat [Plesiocystis pacifica SIR-1] gi|149815842|gb|EDM75363.1| TPR repeat [Plesiocystis pacifica SIR-1] Length = 271 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 11/174 (6%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + E L E L + A + + +L A + L + D Sbjct: 26 EIDIDAEIARNLEEAASNLRNNKVEEAKGQYQWVLDQDADNVGGLTGLGKVALAEEDYAG 85 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A KA+ S + ++ + + K+W++A L + E ++N+ + Sbjct: 86 AVGPLEKAVAASGEDTDARVSLGRAHAGTKDWAKAAEHLGKAW----ELDQNQEQYGLEY 141 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + GD + E ++ + A L+K Sbjct: 142 GVALRESGDAAKAIEVLTEVSEINPKL-------KYVYRELGRAHHAAKDLDKA 188 >gi|118593464|ref|ZP_01550844.1| hypothetical protein SIAM614_16932 [Stappia aggregata IAM 12614] gi|118433943|gb|EAV40601.1| hypothetical protein SIAM614_16932 [Stappia aggregata IAM 12614] Length = 560 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 78/254 (30%), Gaps = 30/254 (11%) Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 E LV+ + IA E +L++ A +SL + + GD+ A Sbjct: 7 LLVKEALVH-------QHAGRIGIALGMFEEILKLDPKNPQANFSLGIAAYQNGDVGLAI 59 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL 234 KA + P V + + + A + + A+ L + A A L +L Sbjct: 60 EMLRKAERKAGKHPQVHQLLGLALMNAGDLAGAMKSLKKAVVLAPNVADFHAHLGDLYTL 119 Query: 235 ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 K + +L + + A + K ++ + A EK Sbjct: 120 ----KRQPQLARQSFQRALAVDPENGYAIVGMGKLDVTVGRVDDAIGWFEKAIA------ 169 Query: 295 IANIYTHLLSENTVGK--------LKRALRLEEINKESVESLV-----IVSKIALEMGSI 341 + L T+ + L++ L E E + KI ++G Sbjct: 170 LGKELPSALHSLTMTRTYRQVPAELEKIENLLEEASTLPEPELAHLHWAAGKIHYDLGDT 229 Query: 342 DQAHAKAMLAMKIA 355 A A ++ Sbjct: 230 PSAAQHYRAARRLR 243 >gi|221068914|ref|ZP_03545019.1| Tetratricopeptide domain protein [Comamonas testosteroni KF-1] gi|220713937|gb|EED69305.1| Tetratricopeptide domain protein [Comamonas testosteroni KF-1] Length = 595 Score = 40.3 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 66/218 (30%), Gaps = 15/218 (6%) Query: 150 PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 P R L + N Q +A P+ P + + E A Sbjct: 266 PQLRLTYTRVLLGQKRNADAKNQLQLITREA----PEFPEAWAMLANLQLQDNELDAADV 321 Query: 210 FLNQ------KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 L Q K + + L + R+ + A+K ++ + N + Sbjct: 322 SLTQFSSLLPKLPEGVGRSAGESQLYLLRA-DLAEKRQRYDEADIYLQRIPDSANLLSVQ 380 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPH----PEIANIYTHLLSENTVGKLKRALRLEE 319 A L Q K ++A +++ I P+ +IA + + +L Sbjct: 381 ARRADLLARQGKVKEARALIQAIPANGPNQKRLKQIAEVQLLRDAGLNKDAYALQAQLLS 440 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + VE + +A G+ + +K AP Sbjct: 441 QFPDDVELAYDTAMLAERAGNFSEMERLLRDIIKRAPD 478 >gi|209886536|ref|YP_002290393.1| TPR repeat protein [Oligotropha carboxidovorans OM5] gi|209874732|gb|ACI94528.1| TPR repeat protein [Oligotropha carboxidovorans OM5] Length = 267 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 5/155 (3%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 +T + R+ L +++ A D + E + + +++ Sbjct: 17 LTVAAVALAGCQTAGRDITGSLGSKASVAAPANDPQRAAEVYGEKYRANPKDLDSALRYG 76 Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLSENTVGKLKRALRLEEIN-KESV 325 ++L + ++ +A +LE+ +P + E+ Y L+EN KL L + + Sbjct: 77 QALRANGQREQAVAVLEQANLAHPGNREVLGAYGRALAENGNFKLA-FDVLSRAHTPANP 135 Query: 326 ESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRK 358 + ++ ++ A+ +MG D+A A+KI P + Sbjct: 136 DWRILSTQGAVLDQMGKPDEARRYYANALKIRPDE 170 >gi|169781742|ref|XP_001825334.1| pre-mRNA-splicing factor clf1 [Aspergillus oryzae RIB40] gi|83774076|dbj|BAE64201.1| unnamed protein product [Aspergillus oryzae] Length = 670 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 89/275 (32%), Gaps = 32/275 (11%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182 ++Y A + + ++P ++ ++ Y + GD +Y + L Sbjct: 257 KEYERARAIYKYALDRLPRSKSVTLHRAYTTFEKQFGDREGVEDVILSKRRVQY-EEQLK 315 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIARSLEN 236 +P + + + + R + + + W R + + E Sbjct: 316 ENPRNYDIWFDFTRLEETSGDPERVRDTYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEE 375 Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D+ + E LKL + A+ I Q + + A L + + P Sbjct: 376 MEAKDVERARQIYNECLKLIPHKKFTFAKIWLMKAQFEIRQMELQTARKTLGQAIGMCPK 435 Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ Y L E + + E N + +S + +++ + D+A A Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSNSQSWIQFAELERGLDDSDRARAIFE 494 Query: 350 LAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380 L ++ P + ++ E+ D++ Sbjct: 495 LGIEQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527 >gi|87308024|ref|ZP_01090166.1| hypothetical protein DSM3645_20542 [Blastopirellula marina DSM 3645] gi|87289106|gb|EAQ80998.1| hypothetical protein DSM3645_20542 [Blastopirellula marina DSM 3645] Length = 604 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 38/100 (38%), Gaps = 4/100 (4%) Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + + D +A++Y + L +P + + + + A+ L ++ +A Sbjct: 110 LAVAALQREDWKAAEKYLNQILAQNPTHRDALKVLANMLRSRERPADAVKLL--QQYHAH 167 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + ++ R+L + + A+ + + ++ Sbjct: 168 FSDDAEITMIYGRAL--LENEETDAAIRSLLAAERIDPKL 205 >gi|261332749|emb|CBH15744.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 466 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 86/220 (39%), Gaps = 28/220 (12%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 V L R GDL ++ ++ K L ++P +P + + Q +L ++ AI + ++ Sbjct: 100 VKGLLT--RRSGDLTTSFQHFQKVLTLNPGSPACLQQLAQTSLLLGKFYEAIESFQRAEE 157 Query: 217 N------AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 K+W+ + L + K + ++ +++ + + +K L Sbjct: 158 ARAARGFRKDWSLQYGVGLCYEYMREYRKAE--EAFVSSMQIQRFDCT----VLRLSKVL 211 Query: 271 ISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHL-LSENTVGKLKRALRLEEINKES 324 + Q + +A +LE+ +P +P+ + +Y + L R L L S Sbjct: 212 VLQKQHSRAISLLEEAVLGSPDNPDMLTVLGLLYLRVDRPAKAFNYLGRCLIL-----NS 266 Query: 325 VESLVIVSKIAL--EMGSIDQAHAKAMLAMKIAPRKEIFL 362 +S ++ ++ E G A K +A+ P L Sbjct: 267 SDSRATMAAASIMQENGEFGVALNKYRVAVPKLP-SSACL 305 >gi|242057585|ref|XP_002457938.1| hypothetical protein SORBIDRAFT_03g022830 [Sorghum bicolor] gi|241929913|gb|EES03058.1| hypothetical protein SORBIDRAFT_03g022830 [Sorghum bicolor] Length = 781 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 12/147 (8%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR--EF 155 + + S + E L LL A + A + + T E Sbjct: 570 GEEASSSRTIGISSAEIRTKLEELSALLHQDTAQLVDDSDSAKALFKALRGQIPTDAEEI 629 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-- 213 + + E+ ++ +AQR A +A ++E +++ +LA E ++I L Sbjct: 630 LFKAAHLETRQLQYQKAAQRLADRA-----THAQLSEEMIKVKLLADEKHKSIGILKSSG 684 Query: 214 ---KKKNAKEWNRNRAILLIARSLENA 237 K+K + A+L + +E A Sbjct: 685 DVLKQKIFDLSAKREALLAELKQVEEA 711 >gi|227822490|ref|YP_002826462.1| putative adenylate cyclase [Sinorhizobium fredii NGR234] gi|227341491|gb|ACP25709.1| putative adenylate cyclase [Sinorhizobium fredii NGR234] Length = 590 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 69/233 (29%), Gaps = 29/233 (12%) Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR--------- 206 ++ LY I DL +A++ +A+ + P + ++ W Sbjct: 342 GLWHLY--KFNIDDLKTAKQLFERAIGLEPTFAQAHARLAYVHIQLG-WYGPLEERAERI 398 Query: 207 --AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 AI + A + A L + R+L G +L+L + Sbjct: 399 GDAIRLAERAI--ALDSREPAAHLALGRALAL--GGQPERGIDHLRNALRLDPSFAQGHF 454 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPH-PEIAN-----IYTHLLSENTVGKLKRALRLE 318 ++L + + + + ++++P P + H + + A Sbjct: 455 ALGQALCYVERPEEGITAINEAFRLSPRDPHLWTFHNMLAIAHYQAGRLAESVAAARASL 514 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQAN 371 + ++++ G +A + P L A +A Sbjct: 515 RQENVTFWPAMVLAAALGAEGPSVEAGEAVAALLCRRPD-----LTADKARAE 562 >gi|220907964|ref|YP_002483275.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7425] gi|219864575|gb|ACL44914.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425] Length = 210 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 11/150 (7%) Query: 129 IALAERQYNIAHEKLEMMLQIPATR---EFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 A +++ T L +GD A A+ + P Sbjct: 69 ALQGAGDLEGAIRSFSEAVKLSGTADNYFA--RGLAL--SDLGDHKQAIADYNVAIRLDP 124 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + + ++ + AI L+Q K + + +R L + + G+ + Sbjct: 125 NFAAAFYNRGTARLALQDQTGAIADLSQAIK----LDSSFVAAYYSRGLAHYNAGNEKLA 180 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNK 275 D +++L A ++ + Sbjct: 181 RQDYNMAVRLSPGMTSAYYNLSQQYQTGGN 210 >gi|223936189|ref|ZP_03628102.1| type II and III secretion system protein [bacterium Ellin514] gi|223895051|gb|EEF61499.1| type II and III secretion system protein [bacterium Ellin514] Length = 906 Score = 40.3 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 72/244 (29%), Gaps = 61/244 (25%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY 158 P A S + + L L+ Q A + Y A E Sbjct: 27 SPDASTAASEEAVRRAADTRSLRQDLVLAQSAQQRKDYVQAARLYE-------------- 72 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 Y RIG +AQ A + V+ + + +Q + + Sbjct: 73 HCYTLVQRIG--PAAQIQAE-----------TRQVVIGLSAVL------LELAHQAQAHG 113 Query: 219 KEW---NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS------ 269 R + +L+I + A + A+++ K + ++ A+ Sbjct: 114 DYVTADERIKRVLIIDPHNQVALQMAQDNKRLIALQAGK-----VPSAEVLAELPGIHTN 168 Query: 270 -------------LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALR 316 L K AE LE+ +K +P A Y +L+ E G+ R Sbjct: 169 EIRVATLVQDGKVLFEAGKLDAAEAKLEQAYKEDPQSVGAYYYLNLIKEKRNGQAVRRSE 228 Query: 317 LEEI 320 LE Sbjct: 229 LESK 232 >gi|145239345|ref|XP_001392319.1| pre-mRNA-splicing factor clf1 [Aspergillus niger CBS 513.88] gi|134076826|emb|CAK39880.1| unnamed protein product [Aspergillus niger] Length = 677 Score = 40.3 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 89/276 (32%), Gaps = 34/276 (12%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182 ++Y A + + ++P ++ A++ Y + GD +Y + + Sbjct: 257 KEYERARAIYKYALDRLPRSKSTALHKSYTTFEKQYGDREGVEDVILSKRRVQYEEQLKE 316 Query: 183 ISPDAP-WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-E 235 S + W A +++ + + R + R L + ++ E Sbjct: 317 NSRNYDIWFDFARLEE--TSGDPDRVRDIYERAIAQIPPSQEKRHWRRYIYLWVFYAIWE 374 Query: 236 NADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + D + E LKL + A+ I Q + A L + + P Sbjct: 375 EMEAKDAERARQIYNECLKLIPHKKFTFAKIWLLKAQFEIRQMNLQAARKTLGQAIGMCP 434 Query: 292 HPEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 ++ Y L E + + E N + +S + +++ + D+A A Sbjct: 435 KDKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSNSQSWIKYAELERGLDDTDRARAIY 493 Query: 349 MLAMKIAPR----KEIFLLLAQIEQANSHNTDKILY 380 L + P + ++ E+ D++ Sbjct: 494 ELGIDQ-PTLDMPELVWKSYIDFEEYE-GEYDRVRQ 527 >gi|89054749|ref|YP_510200.1| SARP family transcriptional regulator [Jannaschia sp. CCS1] gi|88864298|gb|ABD55175.1| transcriptional regulator, SARP family [Jannaschia sp. CCS1] Length = 647 Score = 40.3 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAK 268 + R + ++L+ D + + A A L L + A+ CA + Sbjct: 132 VFEDWLTETRRAVRRHQVAAAEQALDRLDAEANPDAVLACATAILSLDPHHEPAARCAME 191 Query: 269 SLISQNKKRKAEVILEK 285 Q K+ A + E Sbjct: 192 RYAVQGKRGHALRVFET 208 >gi|71010894|ref|XP_758428.1| hypothetical protein UM02281.1 [Ustilago maydis 521] gi|46097983|gb|EAK83216.1| hypothetical protein UM02281.1 [Ustilago maydis 521] Length = 926 Score = 40.3 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%) Query: 164 SCRIGDLNSAQRYATKALDISPDAP--WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G + A+ L + PD P W ++Q I L + + + Sbjct: 529 ALEKGCVEVARSILAYTLRVFPDRPAIWTQAVALEQQ--HGSQENVIALLERAVTSCAKA 586 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 L +A + + D GD A+ I + S S+ AA+ SQ + A Sbjct: 587 ED----LWLALATVHRDAGDTAAARQTLIRAFDANIGSEKISLAAAQLESSQGQLVAARR 642 Query: 282 ILEKI 286 +LE+ Sbjct: 643 LLERA 647 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 79/264 (29%), Gaps = 12/264 (4%) Query: 133 ERQYNIAH----EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA-LDISPDA 187 A + + A G L +A+R +A +++ Sbjct: 600 AGDTAAARQTLIRAFDANIGSEKISLAA----AQLESSQGQLVAARRLLERARVEVGSAR 655 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W+ A ++ S A++ +++ ++ + + + + + + Sbjct: 656 VWMKSAQFER--DHGYTSTALSLIDEALVQFPQFAKLYMMGAQLSQHLFSGEESVKKARE 713 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSEN 306 ++ N I AA+ ++ +LE+ NP P I + + Sbjct: 714 YLGRGIRWSPNCDALWILAARLEACAGLTIRSRALLERARLSNPSSPLIWYESITIELSS 773 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +A L + + ++ +A+ + K A++ L Sbjct: 774 SPPNPTQARTLLSRALQVLPDSGLLWVLAIALEPRAGRKTKMTDALRKTADDSYVLATVA 833 Query: 367 IEQANSHNTDKILYWTQSALHAMP 390 + + W Q A HA P Sbjct: 834 QQFWLEGKPAQARKWFQRATHAAP 857 >gi|300904273|ref|ZP_07122132.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|301302910|ref|ZP_07209038.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|300403806|gb|EFJ87344.1| tetratricopeptide repeat protein [Escherichia coli MS 84-1] gi|300841845|gb|EFK69605.1| tetratricopeptide repeat protein [Escherichia coli MS 124-1] gi|315256571|gb|EFU36539.1| tetratricopeptide repeat protein [Escherichia coli MS 85-1] Length = 745 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 170 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 229 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 230 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 284 >gi|37523641|ref|NP_927018.1| serine/threonine kinase [Gloeobacter violaceus PCC 7421] gi|35214646|dbj|BAC92013.1| glr4072 [Gloeobacter violaceus PCC 7421] Length = 946 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 79/266 (29%), Gaps = 29/266 (10%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFE----SCRIGDLN----SAQRYATKALDISPD 186 ++A E + L + A L + R G + + KAL + P+ Sbjct: 591 DNDLAIELFKRALALDPNYALAHAGLGSAYGSKATRYGQEERWEAESLKAIKKALVLDPN 650 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIAS 245 +A+ Y + +A+ + + A ++ ++ N ++G + Sbjct: 651 LSQAHKALGSYYYGRGRYRQALASFKRGAELNPSLPVVAGAYGGLSAAMGNLEEGVRWSK 710 Query: 246 YHDAIESLKLC-DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--- 301 A+ + N M + ++ A I P A Y Sbjct: 711 RSIALNPTRNGYPNLGMIYTILGEDARARRALEAAVSI-------QPDNVYALSYLSTLH 763 Query: 302 -LLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-- 358 L + + K A ++ + + V L G +A A +KI R Sbjct: 764 KLRGQYDEAR-KTAQKILARDPQEVFGLTAAGDAERFAGRWSEAKAHYEKVLKITDRLDG 822 Query: 359 -----EIFLLLAQIEQANSHNTDKIL 379 + +LA I + T Sbjct: 823 ESGQLQSTTILADIARREGQPTRAAQ 848 >gi|323170172|gb|EFZ55825.1| tetratricopeptide repeat family protein [Escherichia coli LT-68] Length = 885 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 307 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 366 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + +L P V VL+ A + ++ Sbjct: 367 LAARNGNFDAGLDFCQHSLRTCPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 421 >gi|313214288|emb|CBY42728.1| unnamed protein product [Oikopleura dioica] Length = 599 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 74/223 (33%), Gaps = 41/223 (18%) Query: 128 QIALAERQYNIAHEKLEMMLQI-----PATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A E+QY E + ML+ P + + + GD+ SA+ +A + Sbjct: 373 RAAFLEKQY-GTKESYDNMLERAVKACPREEKLWLMG-AKSKWQQGDIRSARGILEQAFE 430 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL-------LIARSLE 235 + + + A V+ E RA L + + +A + +++ Sbjct: 431 SNQQSEEIWLAAVKLESENNELLRARQILARARTSASSPRVMMKSAKLEWCLGELKNAIK 490 Query: 236 NADKG----------------------DMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 +D+G D ++ + ++ C +S I A S+ Sbjct: 491 LSDEGLAKYPKFDKLWMMKGTIFLQMKDANSARKAFAKGIENCKDSKPLWILLADLEESE 550 Query: 274 NKKRKAEVILEKIWKVNPH-PEIANIYTHLL----SENTVGKL 311 + KA +LE+ NP PE+ L +L Sbjct: 551 GNQVKARSVLERARLKNPASPELWKRAIELEKRVSGNEIADRL 593 Score = 38.4 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 80/225 (35%), Gaps = 22/225 (9%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D+ A+ + +P P + + + A + + + ++ + Sbjct: 84 DVRKARLLLKSVRETNPKQPQAWIGSARLEEVVGRLAEARVLI---MQGTDKCPKSEDVW 140 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L A L AD+ I + ++ NS+ AA + KR + ++ + Sbjct: 141 LEASRLAPADQAKKIFA-----AAVAEIPNSVRIWCAAANLEKEKKAKR---RVYQRALE 192 Query: 289 VNPHP-EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P+ + L ++ L RA E S E + ++K+ + D A Sbjct: 193 NVPNAVRLWKAAVELEEIDDAKELLTRA---VECCPSSAELWLALAKL----ETYDNARK 245 Query: 347 KAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 A P K +++ A++E+AN + + + AL A+ Sbjct: 246 VLNKARATIPTDKSVWITAAKLEEANGKSERCAIV-IKRALEALR 289 >gi|257458356|ref|ZP_05623504.1| TPR domain protein [Treponema vincentii ATCC 35580] gi|257444291|gb|EEV19386.1| TPR domain protein [Treponema vincentii ATCC 35580] Length = 664 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 51/187 (27%), Gaps = 37/187 (19%) Query: 201 AKEWSRAITFLNQKKKNAKEWN-RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + W AI Q K +N R + +L G+ + A + + Sbjct: 35 HENWYGAIELYQQALKENPAYNAVYRGLAECFYAL-----GEYDQAIVYAERARRYSPQD 89 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEE 319 + A LI + +A+ I + Sbjct: 90 VDIENLYAFILIGIGRIEEAQKI-------------------------------FSGILN 118 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKIL 379 ++++ +++I + G + A A++ LL + + N Sbjct: 119 RYPNNLDARFGMAEIEVTGGRLTNASELYAAALRRQSENRKALLSLALLSHETGNMQAAQ 178 Query: 380 YWTQSAL 386 + AL Sbjct: 179 SYISRAL 185 >gi|209527435|ref|ZP_03275940.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209492108|gb|EDZ92458.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 520 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 66/233 (28%), Gaps = 22/233 (9%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 ++ + E E + I + A Y + + A +A + P+ Sbjct: 286 RWRDSLEAFERAINIQSNFYPAWYGRANALSSLSQYDEAIASYDRATQLQPNFHPAWRDR 345 Query: 195 VQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + A+ ++ + ++ L L N A+ A Sbjct: 346 GALLMSLGRHEEALQAFDRLLQIQPDDYGIWY---LRGNILMNHLDDYPEAARSYARVIN 402 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVIL----------EKIWKVNPHPEIANIYTHLL 303 + + A A++L +A L + W + I+ + Sbjct: 403 -IKPDFTPAFTAKAQALFRLGDYGEAIAWLDESLHQNSHQREAWVLR-----GQIFMAIQ 456 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L R ++ +S + + L + +A A A++I P Sbjct: 457 RY--AQALNAYNRAVNLDSNHSQSWLGKAIAYLRLNRDQEAKDAAQRALEINP 507 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 20/207 (9%), Positives = 61/207 (29%), Gaps = 25/207 (12%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + W ++ + + R+ + + + +L N Sbjct: 283 RHERWRDSLEAFERAINIQSNFYP----AWYGRANALSSLSQYDEAIASYDRATQLQPNF 338 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL-----SENTVGKLKRA 314 A L+S + +A +++ ++ P + Y ++ + Sbjct: 339 HPAWRDRGALLMSLGRHEEALQAFDRLLQIQPD-DYGIWYLRGNILMNHLDDYPEAARSY 397 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE-IFLL-----LA--- 365 R+ I + + ++ +G +A A ++ + ++L +A Sbjct: 398 ARVINIKPDFTPAFTAKAQALFRLGDYGEAIAWLDESLHQNSHQREAWVLRGQIFMAIQR 457 Query: 366 ------QIEQANSHNTDKILYWTQSAL 386 +A + +++ W A+ Sbjct: 458 YAQALNAYNRAVNLDSNHSQSWLGKAI 484 >gi|169832335|ref|YP_001718317.1| TPR repeat-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169639179|gb|ACA60685.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Desulforudis audaxviator MP104C] Length = 209 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 9/163 (5%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + +L+ A Y+L + L+ A+ + KA++ + Y + Sbjct: 16 KRILKENEDCATAAYNLGVAMMQQNRLDEAREHFEKAIETGSRMFEAYVNLGYIYFKEGD 75 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + + + + R A L A L+ A G+ I + A+E L A Sbjct: 76 MEKVAEVNRKAVELEPRYARGYANLGFAY-LQMAKTGEAIEALQKALE---LNPEIAQAW 131 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTH 301 A + + + KA + E++ + P H +A Y H Sbjct: 132 NNLANAYLQRGDVDKAIEVGERLIALAPNFGLGHNNLAVAYYH 174 >gi|58583229|ref|YP_202245.1| hypothetical protein XOO3606 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427823|gb|AAW76860.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 565 Score = 40.3 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 20/250 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L +A+ Sbjct: 316 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 375 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 376 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 431 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-- 296 D+ + D + L ++ A + + ++A ++++ +P +A Sbjct: 432 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPD-NLAIV 490 Query: 297 -----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 491 DSYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEA 546 Query: 352 MKIAPRKEIF 361 ++ P Sbjct: 547 RRLDPDNRAL 556 >gi|322490088|emb|CBZ25350.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 3826 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 79/287 (27%), Gaps = 55/287 (19%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + A + + +L +E A Q + A ++ P Sbjct: 2245 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRHAAE--YADLVCDPKK 2302 Query: 153 REFAVYSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ + GD +A R A +++ P ++ W A+ Sbjct: 2303 NAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYP-----FLRLQEEEG-WVEALAAD 2356 Query: 212 NQKKKNAKEW----------------------NRNRAILLI---ARSLENADKGDMIASY 246 +++A E+ R A+ A +++ Sbjct: 2357 EAFQRHAAEYADLVCDPKKNAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYPFLRL 2416 Query: 247 HD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 H+ +E+L + + A + K A +E + Sbjct: 2417 HEEEGWVEALAADEAFQRHAAEYADLVCDPKKNAAALRGVEDA-------------MNER 2463 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + L+RA ++E+ + + +E + D+A + Sbjct: 2464 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRLAA 2510 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 93/325 (28%), Gaps = 57/325 (17%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + A + + +L +E A Q + A ++ P Sbjct: 1953 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRHAAE--YADLVCDPKK 2010 Query: 153 REFAVYSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ + GD +A R A +++ P ++ + W A+ Sbjct: 2011 NAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYP-----FLRLHEEEG-WVEALAAD 2064 Query: 212 NQKKKNAKEW----------------------NRNRAILLI---ARSLENADKGDMIASY 246 +++A E+ R A+ A +++ Sbjct: 2065 EAFQRHAAEYADLVCDPKKNAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYPFLRL 2124 Query: 247 HD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 H+ +E+L + + A + K A +E + Sbjct: 2125 HEEEGWVEALAADEAFQGLAAEYADLVCDPKKNAAALRRVEDA-------------MNER 2171 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA--HAKAMLAMKIAPRKEIF 361 + L+RA ++E+ + + +E + D+A A A + K+ Sbjct: 2172 GDAVAATLRRAAAMDELASRYPFLRLQEEEGWVEALAADEAFQRHAAEYADLVCDPKKNA 2231 Query: 362 LLLAQIEQANSHNTDKILYWTQSAL 386 L +E A + D + + A Sbjct: 2232 AALRGVEDAMNERGDAVAATLRRAA 2256 Score = 36.8 bits (84), Expect = 9.0, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 93/325 (28%), Gaps = 57/325 (17%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKLEMMLQIPAT 152 + A + + +L +E A Q + A ++ P Sbjct: 2391 GDAVAATLRRAAAMDELASRYPFLRLHEEEGWVEALAADEAFQRHAAE--YADLVCDPKK 2448 Query: 153 REFAVYSLYFESCRIGDLNSA-QRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A+ + GD +A R A +++ P ++ + W A+ Sbjct: 2449 NAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYP-----FLRLHEEEG-WVEALAAD 2502 Query: 212 NQKKKNAKEW----------------------NRNRAILLI---ARSLENADKGDMIASY 246 ++ A E+ R A+ A +++ Sbjct: 2503 EAFQRLAAEYAELVCDPKKNAAALRGVEDAMNERGDAVAATLRRAAAMDELASRYPFLRL 2562 Query: 247 HD---AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 H+ +E+L + + A+ + K A +E + Sbjct: 2563 HEEEGWVEALAADEAFQGLAAEYAELVCDPKKNAAALRGVEDA-------------MNER 2609 Query: 304 SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA--HAKAMLAMKIAPRKEIF 361 + L+RA ++E+ + + +E + D+A A A + K+ Sbjct: 2610 GDAVAATLRRAAAMDELASRYPFLRLQEEEGWVEALAADEAFQRHAAEYADLVCDPKKNA 2669 Query: 362 LLLAQIEQANSHNTDKILYWTQSAL 386 L +E A + D + + A Sbjct: 2670 AALRGVEDAMNERGDAVAATLRRAA 2694 >gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei] Length = 476 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 68/175 (38%), Gaps = 15/175 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQRYATKALD----ISPDA 187 + A + L+ M+++ E Y L E C+ G + A + K ++ + P + Sbjct: 296 SGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQS 355 Query: 188 -----PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 P +++ + S+A T + Q K L ++ +G Sbjct: 356 TLHLEPSAHNPMIEYLCNNGQASKAETLVRQLMKLG----VQDPTALNTLIRGHSQEGSP 411 Query: 243 IASYHDAIESLKLCDNSIMASICAA-KSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +++ L+ +S ++ + +S + +N+ A+ L+ + + + P+ A Sbjct: 412 DSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDHLPDSA 466 >gi|302878313|ref|YP_003846877.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella capsiferriformans ES-2] gi|302581102|gb|ADL55113.1| Tetratricopeptide TPR_1 repeat-containing protein [Gallionella capsiferriformans ES-2] Length = 750 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 75/238 (31%), Gaps = 20/238 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 YL + +++ A +L++ A +++ G + A Y AL+ Sbjct: 10 YLNQAVAQQLAGEFDAAERSYLEILRLDPQHSEAQHNMGVLLLNRGASDDALLYLLAALE 69 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN---ADK 239 I P + + A + A L + + A+ A+ + Sbjct: 70 IEPSRGQYWISYIDALFKAGQREAAQQVLELAVQQGLQGEEVDALCFQAQEIAPYSPVSA 129 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G + + +L A++ A + + A WKV Sbjct: 130 GVPSSQEQQTLLALFNAGQQSEAAVLARRMTL-------AYPSFGVGWKV---------- 172 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ + L + + + E+ + I +G +D+A A A+++ P Sbjct: 173 LGAVTVSDKEALIPMQQAALLCPDDFEAHYNLGLILQALGQLDEAAASYRRALQLNPD 230 >gi|257061342|ref|YP_003139230.1| hypothetical protein Cyan8802_3576 [Cyanothece sp. PCC 8802] gi|256591508|gb|ACV02395.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802] Length = 261 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 22/205 (10%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+ I A N A + + + Y + + A + +Q+ Sbjct: 41 QGVDKIGAGNYQGA--IADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQL 98 Query: 150 PATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPW-------VTEAVVQQYVLA 201 + Y + ++ D A ++A+ ++P+ + + Sbjct: 99 NP-QFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAI 157 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 +++ AI N N A R+L + + D +S++L N Sbjct: 158 ADYTEAIRL-----------NSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFAD 206 Query: 262 ASICAAKSLISQNKKRKAEVILEKI 286 A + + +A L+K Sbjct: 207 AYYNRGITQFKLGNESEAIADLQKA 231 >gi|218247323|ref|YP_002372694.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] gi|218167801|gb|ACK66538.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801] Length = 260 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 22/205 (10%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G+ I A N A + + + Y + + A + +Q+ Sbjct: 40 QGVDKIGAGNYQGA--IADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQL 97 Query: 150 PATREFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPW-------VTEAVVQQYVLA 201 + Y + ++ D A ++A+ ++P+ + + Sbjct: 98 NP-QFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAI 156 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 +++ AI N N A R+L + + D +S++L N Sbjct: 157 ADYTEAIRL-----------NSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFAD 205 Query: 262 ASICAAKSLISQNKKRKAEVILEKI 286 A + + +A L+K Sbjct: 206 AYYNRGITQFKLGNESEAIADLQKA 230 >gi|197123792|ref|YP_002135743.1| hypothetical protein AnaeK_3401 [Anaeromyxobacter sp. K] gi|196173641|gb|ACG74614.1| Tetratricopeptide TPR_4 [Anaeromyxobacter sp. K] Length = 453 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 86/286 (30%), Gaps = 24/286 (8%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREF---------------AVYSLYFESCRIGD 169 L + + A E + A ++L G Sbjct: 45 LSARAQRLYAEAVQAQEDQRRLKVPTDWAVLERKWRAVLDAGEVAEARHNLGVALEAQGR 104 Query: 170 LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 ++ A+ KAL P + + + A + ++ E R R L Sbjct: 105 VDEARAEYQKALAAKPGLRQSAVNLGVLLEKQGDLAGAQSIYAAVVRDFPEDARARERL- 163 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + D G + ++ A E+L S+ A + A+ + + A++IL + K+ Sbjct: 164 ---AAMYRDAGQLDEAWRLAREALLRDSRSVGAYVVMARVSLQRGNLDVAQLILLRAQKL 220 Query: 290 NPH----PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 P P +A + ++ L ++ + + + A++ Sbjct: 221 APSEPELPFLAGEVLAKQGDVEAAAVQWRKALA-LDDGYLPARRALLDAAVKGRRWPVVA 279 Query: 346 AKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 A + P+ L + + + D+ L A A D Sbjct: 280 EHAQAMVHADPKNAAAWLALGVAKRHQDKPDEALAAYAKAQEASGD 325 >gi|118094699|ref|XP_426665.2| PREDICTED: similar to tetratricopeptide repeat domain 4 [Gallus gallus] Length = 313 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 40/91 (43%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 K++ RA+ ++ + RA+LL R+ G+ ++ DA ++ KL + + Sbjct: 80 EKDYGRAVRAYSEGLRQRFGDAELRAVLLSNRAAAQCRLGNYRSALADATQARKLKPDHL 139 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A + A + +A E+ +++P Sbjct: 140 KAVVRGALCHMELKNYSEAIAWCEEGLRIDP 170 >gi|32476215|ref|NP_869209.1| hypothetical protein RB10039 [Rhodopirellula baltica SH 1] gi|32446759|emb|CAD76595.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 465 Score = 40.3 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 3/128 (2%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L ++ G +++A +A A PD P V + + + AI L+ Sbjct: 83 RELAEQALADGRIDAAYDHARVAFRYGPDDPLVIFVMARVLGERHRFEEAIAMLDSVAMR 142 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + R L + KGD + + L + M AK + Q ++ Sbjct: 143 DPQA---RLPTLGQTAQWMVLKGDWEQAENRYKAILDEVPDIAMVHEEIAKLYLRQGRRH 199 Query: 278 KAEVILEK 285 A + + Sbjct: 200 DASSHIRQ 207 >gi|327194865|gb|EGE61697.1| putative O-linked GlcNAc transferase protein [Rhizobium etli CNPAF512] Length = 288 Score = 40.3 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 11/149 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A ++ A + L R + L ++ D A +KA+ ++P Sbjct: 151 AGQDDQAFNDFDRAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++P Y+ + A N +A E N N A ++L +GD + Sbjct: 204 NSPEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ L A A+ S Sbjct: 260 ARSYRHAVGLDPKYQPARDGLARVGASAG 288 >gi|323177323|gb|EFZ62911.1| tetratricopeptide repeat family protein [Escherichia coli 1180] Length = 745 Score = 40.3 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 170 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 229 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 230 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRD 284 >gi|294638216|ref|ZP_06716470.1| cellulose synthase operon protein [Edwardsiella tarda ATCC 23685] gi|291088652|gb|EFE21213.1| cellulose synthase operon protein [Edwardsiella tarda ATCC 23685] Length = 1173 Score = 40.3 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 87/311 (27%), Gaps = 57/311 (18%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI 149 G ++AA AR+ + L+ L +V A A + LQ Sbjct: 379 QGDEALAARRYDEARQKYRQAQALDGQEAYALIGLGDVAAAQ--GDLASAERTYQRALQF 436 Query: 150 PATREFAVYSLYFESCRIGDLNSAQRY-------ATKALDISPD--APWVTEAVVQQYVL 200 + A+ L + + A Y +AL + + Sbjct: 437 DSNNGSALRKLVGVYQQQS-PDKALMYLQQLPSAQRRALKANYQSLQSDALQQQAAVLAG 495 Query: 201 AKEWSRAITFLNQKKKNAKE-----------------------------------WNRNR 225 + W A+ L ++ + ++ Sbjct: 496 RQAWGPALERLTAAQQLTPDDVWLNYRLAGTLVSAGQPLRGDALMQRMAQRFPHDRDQIY 555 Query: 226 AILLIARSLENADKGD------MIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRK 278 A L S + + + + D +++ L I A A L + + Sbjct: 556 AHALYLSSRDQTQQAEAVLRQLPRDQWSDGMQA--LALRLQANRILAHANQLRDAGDETQ 613 Query: 279 AEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 A L++ +P ++ L ++ L+ ++ + ++ ++ + + + + Sbjct: 614 AIAYLQRQ-PSSPAIDLTLADWALARDDYHTALQGYQQVLARDPQNADARLGMIETRVAQ 672 Query: 339 GSIDQAHAKAM 349 G A A Sbjct: 673 GDYPAARAALQ 683 >gi|291222353|ref|XP_002731180.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 1253 Score = 40.3 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 53/316 (16%), Positives = 107/316 (33%), Gaps = 61/316 (19%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYL---VYLLEVQIALAERQYNIAHEKLEM-MLQIPAT 152 + +I A+ + QH +LL QI + + A + LE + Sbjct: 471 SGDIDAAQ-----STLQHCLDINPTFSDAHLLMAQIYAHQGSFKQASQSLEQGLSYNFEV 525 Query: 153 REFAVYSLYFES--CRIGDLNSAQRYATKALDI----SPDAPWVTEAVVQQYVLAKEWSR 206 RE +Y L R GD+ A R A+ + P A Sbjct: 526 RESPLYHLIKARIQKRQGDIEDAARTLQTAMTLPGIKKPGAGSA---------------- 569 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARS---LENADKGDMIASYHDAIESLKLCDNSIMAS 263 +K K + +R + + + + + + DAI + + Sbjct: 570 ------KKTKAGQVSTNDRVSVFLELADAYRQLDRQPEAAKVMQDAINEFTDTPEEVRIT 623 Query: 264 ICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLSENTVGKLKRA---- 314 I + + + A +L + + V ++A+IY + + KR Sbjct: 624 IANSDLALQRGDVELALGMLRNITPGQSYYVEAKEKMADIYLNYRKD------KRLYASC 677 Query: 315 -LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA--N 371 L + + +S + +++ + + ++A A+K P F L ++I +A Sbjct: 678 YRELVDKH-QSAHTSLLLGDAYMSIQEPEKAIEVYEAALKKNP--RDFTLASKIGRALVK 734 Query: 372 SHNTDKILYWTQSALH 387 +HN K + + +AL Sbjct: 735 THNYGKAINYYDAALK 750 Score = 36.8 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 33/234 (14%) Query: 149 IPATREF--AVYSLY---FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 P T+ + L+ GD+++AQ LDI+P + Q Y Sbjct: 448 DPLTKAVPGLMEGLFLMGKVKFLSGDIDAAQSTLQHCLDINPTFSDAHLLMAQIYAHQGS 507 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + +A L Q E R + + ++ +GD+ + ++ L + Sbjct: 508 FKQASQSLEQGLSYNFEV-RESPLYHLIKARIQKRQGDIEDAARTLQTAMTLPGIKKPGA 566 Query: 264 ICAAKSLISQNKKRKAEVI---LEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 A K + + + LE +A+ Y L + K Sbjct: 567 GSAKK--TKAGQVSTNDRVSVFLE----------LADAYRQL--DRQPEAAKVMQDAINE 612 Query: 321 NKESVES-LVIVS--KIALEMGSIDQAHAKAMLAMKIAPRKEIFL----LLAQI 367 ++ E + ++ +AL+ G ++ A + I P + ++ +A I Sbjct: 613 FTDTPEEVRITIANSDLALQRGDVELA---LGMLRNITPGQSYYVEAKEKMADI 663 >gi|189500702|ref|YP_001960172.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] gi|189496143|gb|ACE04691.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides BS1] Length = 466 Score = 40.3 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 67/236 (28%), Gaps = 41/236 (17%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + + A E ++ A+Y+L + D + A + T+ +++ P Sbjct: 245 RANVLAITGKIEEAAESYLKTIEFEPDDINALYNLGIAFEELEDYDKAITHYTRCIELKP 304 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 D W A + + + Sbjct: 305 DFADA-------------W-------------------------FALACCHEADNAYEEA 326 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLLS 304 ++L S+ A+ + ++ +KI + P++ Y +L Sbjct: 327 LKSVNQALNYLPGSVDFLQLKAEIYYNMESLERSISTYKKILTIEADSPQLWVDYAVVLR 386 Query: 305 ENTV--GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 E ++ L+ E+ +S E+ ++ +G A I P K Sbjct: 387 EASLYTESLEAFEHSLELQPQSAETHFEIAATYFALGDKKSTIKSLTKAFSIDPDK 442 >gi|117925099|ref|YP_865716.1| hypothetical protein Mmc1_1802 [Magnetococcus sp. MC-1] gi|117608855|gb|ABK44310.1| TPR repeat-containing protein [Magnetococcus sp. MC-1] Length = 822 Score = 40.3 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 22/160 (13%) Query: 141 EKLEMMLQIPATREFAVYS-----LYFESCR-IGDLNSAQRY---ATKALDISPDAPWVT 191 + E M+Q P +Y + + G +A A +A ISP Sbjct: 230 QLFEWMVQHPP------RGQDPWLVYVNALQLDGAYQAALDLCVQAEQAQQISPQLWDAR 283 Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 Q W A+ E + +RA + + G + + Sbjct: 284 GVAWQ---AVGAWQEAMRAFEISL----EQDASRAAVHSNFGMLCHILGKDVEAEQAFRH 336 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ L + MA +L Q + +A V + ++NP Sbjct: 337 AIGLQPDLAMAYANLGLALTRQYRLAEAAVACRQALQLNP 376 >gi|326385959|ref|ZP_08207583.1| cellulose synthase protein C precursor [Novosphingobium nitrogenifigens DSM 19370] gi|326209184|gb|EGD59977.1| cellulose synthase protein C precursor [Novosphingobium nitrogenifigens DSM 19370] Length = 1150 Score = 40.3 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 85/269 (31%), Gaps = 49/269 (18%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL A+ + E A+ L + + G+ A+ Y ++ + A Sbjct: 133 AALQANDLATANRQFESAFARNHRDADALGGLGLVALKQGNFAKAREYLEQSSRLGDAAK 192 Query: 189 WV-----------------------------------------TEAVVQQYV----LAKE 203 W E ++ Sbjct: 193 WAEALASAKYYAGLGDAQNLAARGQLADAQKMAEDLVRTGGARNETALELLADIYDRQGR 252 Query: 204 WSRAITFLNQKKKNAKEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 ++ A Q + KE ++ + R+L A +GD IA+ + + L L Sbjct: 253 YADAADLYRQASTHGKEGDKRLASRAARGRALAAAGRGDDIAAEQEFQQGLMLDTEDPWI 312 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 A+ +I + + +AE ++ + + P+ +Y + ++ +G++ A L + Sbjct: 313 RYEFARFMIKRGRVAEAESLI-QALSSSTDPD--ALYAAAMVDSDLGRIAAAEALIQRIP 369 Query: 323 ESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E ++ + + A AK + A Sbjct: 370 EIYQTQPMRAFAVGLKTDTAIARAKTLAA 398 >gi|254442097|ref|ZP_05055573.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198256405|gb|EDY80713.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 506 Score = 40.3 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 8/139 (5%) Query: 126 EVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 E AL A + L + + P + E V +L G+L A +A++ Sbjct: 42 EANAALFVNDTATAIDALREGLAKYPDSNELRV-ALSRAVQNTGELEEAASLLEQAIEQD 100 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEWNRNRAILLIARSLENADKGDMI 243 PDA + V + + AI K + ++ +A+ + EN G + Sbjct: 101 PDADQLWVKVGELRASLGQSEAAIRAFESFLKNHGGDFLAWKAV-----AQENEKLGKLT 155 Query: 244 ASYHDAIESLKLCDNSIMA 262 + A + ++ +S A Sbjct: 156 DAIKAASKWNEITPSSQPA 174 >gi|167585426|ref|ZP_02377814.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ubonensis Bu] Length = 608 Score = 40.3 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 89/276 (32%), Gaps = 26/276 (9%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +++AA A + + + + ++ + + + A ML Sbjct: 121 IALAAQ--SPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQP----MLARELA 174 Query: 153 REFA-VYS-----LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 R L R D L + P A+ +Q + + Sbjct: 175 RANGDTRGPAILALQALLARGADRVGGLAVLRDMLKNDMNRPEAQLAIARQQLAVDDKDG 234 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA 266 A L Q + ++ L+ + A++ I S+ ++ + A + Sbjct: 235 AAQSLKQALQIRPDY---LPAALMLSQMGPAERAAGITSFEKYVQQNPKSRD---ARLAL 288 Query: 267 AKSLISQNKKRKAEVILEKIWK---VNPHPEIANIYTHLLS---ENTVGKLKRALRLEEI 320 ++ ++ + A+ E + K +P P +A + ++ LK+ ++L Sbjct: 289 SQLYLADERLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDATAYLKQYVQLGAK 348 Query: 321 NKESV--ESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + + +++IA++ G+ A + Sbjct: 349 QPNADVGQGYIYLAQIAIDQGNDANASQWLDKVDQT 384 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 62/166 (37%), Gaps = 16/166 (9%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +A + + D + ++L++ + + A++ L +A I V Sbjct: 220 LAIARQQLAVDDKDGAAQSLKQALQIRPDYLPAALM----LSQMGPAERAAGITSFEKYV 275 Query: 290 NPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 +P+ +A +L E K+ + +++ + L+ ++ I ++ +D A Sbjct: 276 QQNPKSRDARLALSQLYLADERLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDA 335 Query: 345 HAKAMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 A +++ ++ + ++ LAQI + N W Sbjct: 336 TAYLKQYVQLGAKQPNADVGQGYIYLAQI-AIDQGNDANASQWLDK 380 >gi|86157635|ref|YP_464420.1| hypothetical protein Adeh_1209 [Anaeromyxobacter dehalogenans 2CP-C] gi|85774146|gb|ABC80983.1| conserved hypothetical membrane protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 1079 Score = 40.3 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 64/206 (31%), Gaps = 16/206 (7%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG--DMIASYHDAIESLKLCDN 258 + + + ++ +A+ L G D++ + ++ Sbjct: 814 RGDAAGVADLEEAARAAPEDGVIRQAVAEALVQLGVDADGARDVLRAEGLYRAAIAAWPR 873 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKR 313 +A + ++L + + +A + ++NP H A++ L + Sbjct: 874 FEIAWVNLGRALALEGRVPEALAAERRALELNPESGGAHRWAADLLLAL--GRPGEAIAH 931 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK-----EIFLLLAQIE 368 A + + + G D+ + A+++ PR LLLA Sbjct: 932 AREAVRLAPGAARLRAGLGTSLAMAGRFDEGLRELREAVRLDPRAPEPLGRAALLLATRP 991 Query: 369 QANSHNTDKILYWTQSA--LHAMPDP 392 A + ++ + A L DP Sbjct: 992 GATGADAEEAVRLASRARSLTDGRDP 1017 >gi|319788000|ref|YP_004147475.1| cellulose synthase operon C domain protein [Pseudoxanthomonas suwonensis 11-1] gi|317466512|gb|ADV28244.1| cellulose synthase operon C domain protein [Pseudoxanthomonas suwonensis 11-1] Length = 1499 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 77/247 (31%), Gaps = 26/247 (10%) Query: 148 QIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 Q P R + GD A+ + L P P + + + ++ Sbjct: 272 QDPNQRLLAEGFR-----ALEGGDDAVAEARFAQVLRARPRDPEAMGGLGSVRLRQQRFA 326 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A L ++W + +L+ A G A +++L A Sbjct: 327 EASELLRPAAAANRKWKQAADTAQYWVTLQGARNGGPDAVRK-VSAAVQLVPR-EPAGHV 384 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLE-EINKE 323 L + AE K +++ P A L+ G+ A L + E Sbjct: 385 LLAQLQEGSDPAAAEAGYRKALELD--PANAGALQGLVGLLGRQGRAAEAASLYERLTPE 442 Query: 324 SVE---------SLVIVSKI--ALEMGSIDQAHAKAMLAMKIAPRKEIFLL-LAQI-EQA 370 E + + ++ AL G +D A + A+ R L LA++ ++A Sbjct: 443 QRERAGGAGALRASLARARAQEALAAGDLDTARIELEDALLEDGRDPWLRLELARLYQRA 502 Query: 371 NSHNTDK 377 + + Sbjct: 503 GRPDQAR 509 Score = 36.8 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 10/132 (7%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAV--------YSLYFESCRIGDLNSAQRYATKALDIS 184 + + A E + R + E+ GDL++A+ AL Sbjct: 426 QGRAAEAASLYERLTPEQRERAGGAGALRASLARARAQEALAAGDLDTARIELEDALLED 485 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 PW+ + + Y A +A ++ + A + E D G + A Sbjct: 486 GRDPWLRLELARLYQRAGRPDQARGIMDGLLAIDESPQTLHA--AAVYAQEQGDWGSVYA 543 Query: 245 SYHDAIESLKLC 256 + + + Sbjct: 544 NLERIPPASRDS 555 >gi|168700576|ref|ZP_02732853.1| possible protein kinase [Gemmata obscuriglobus UQM 2246] Length = 1093 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 51/179 (28%), Gaps = 22/179 (12%) Query: 113 QHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + + L Y+ Q+ A A L+ A + R GD Sbjct: 841 RALKLDPKLTEAYIQRGQLREAVGDSAGAIGDYTQALETGTAPARAYFKRATAKFRAGDR 900 Query: 171 NSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWS----RAITFLNQKKKNAKEWNRN 224 + A+ ++P WV A W+ A+ ++ K Sbjct: 901 DGAKADREAGFQVTPTDELSWVARA-------ENRWTEDPTGALADADEALKENG----- 948 Query: 225 RAILLIARSLENADKG--DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 R++ + +G + +++L + + A L K+ +A Sbjct: 949 RSVFALQMKAAILSEGLKRPEDALKVLDRAVELHPDYVPARAGRGVLLARAGKREEALR 1007 >gi|163738051|ref|ZP_02145467.1| hypothetical protein RGBS107_06554 [Phaeobacter gallaeciensis BS107] gi|161388667|gb|EDQ13020.1| hypothetical protein RGBS107_06554 [Phaeobacter gallaeciensis BS107] Length = 818 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 79/285 (27%), Gaps = 38/285 (13%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ-YNIAHEKLEMMLQIPATREF 155 A + LA V + H + L E +IA + +A E + + + Sbjct: 474 AGDPHLAGAALRSVDRTGVEHVPE-INLAEAEIARLKGDVETVAQELTDEVAERSENAPR 532 Query: 156 AVYSLY------FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 A+ L + + A Y SP + AVV L E+ + Sbjct: 533 ALIELIDLSFAERSALSPDVPDLAASY-EVENRDSPLGADLRRAVVAALALTGEFHDSFN 591 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + R A+ + L Y I + + A+ Sbjct: 592 ELEVLSRRDGPAARTAALEPLLTLLTERADDVTFLQYALVIAANGTTAEVAPVADIVAER 651 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 L+ ++A+ IL+K + NT +L A + + S + Sbjct: 652 LLDLGFAQQAQSILKK--------------LAMEPGNTKRRLILAK--AALAMDKPHSAL 695 Query: 330 -------------IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 + ++ G +A + + F Sbjct: 696 VELMGLSGSAANKLRAEALWRNGEYARAGEYLLEEQEKDAAARGF 740 >gi|160900159|ref|YP_001565741.1| tetratricopeptide repeat-containing protein [Delftia acidovorans SPH-1] gi|160365743|gb|ABX37356.1| Tetratricopeptide domain protein [Delftia acidovorans SPH-1] Length = 391 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 65/174 (37%), Gaps = 9/174 (5%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-KKKNAKEWNRNRAI 227 ++ +R A + A++ Y +++W++A + ++ N +++ A Sbjct: 128 AEDALRRLEGTAFE-----AEARLALLAIYERSRDWTQAAAIARRMQEANQGDFSGRLAH 182 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L + +G + +++ + + A+ + +A LE + Sbjct: 183 YLCEDAQALLTQGQQAEALQRLQQAITTAPQAARPRLEHAQLQHRMGQSAQALHTLESLA 242 Query: 288 KVNPH--PEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + +P P A + + + T + L + +++ ++ + +AL+ Sbjct: 243 EQSPASLPLAAQLLVDIAA-ATGQRQHIHQLLSQQYEQAPSLDLLQALVALDAQ 295 >gi|56420359|ref|YP_147677.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426] gi|47076784|dbj|BAD18326.1| hypothetical protein [Geobacillus kaustophilus] gi|56380201|dbj|BAD76109.1| hypothetical protein [Geobacillus kaustophilus HTA426] Length = 1358 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 11/189 (5%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +A+ ++ + + YV + A+ + A+ W+ + A + L+ Sbjct: 1154 EEAIRLNRSHAEAYGQLARLYVAIELEDDAVKTWRKAL--ARVWDPSLAREFVEHLLKAD 1211 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN 297 ++ + + + + + A + + + KAE LE I P +A Sbjct: 1212 EEKKRQEAKRWLERLVADDPDDVELRVLQAVVWLQEGQHEKAERQLEAIVAEEP---LAR 1268 Query: 298 IYTHLLSEN--TVGKLKRALRL----EEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 LL E G+ + A L + E E + ++ G I++A A Sbjct: 1269 EALMLLGEQYMETGRYQEAAALWERYADWYPEDEELNMQLAAAYEAAGHIERALAAIERC 1328 Query: 352 MKIAPRKEI 360 +A + Sbjct: 1329 AHMAKDARL 1337 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 84/255 (32%), Gaps = 44/255 (17%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE- 192 +Y A + E L+ + + L G+ + +A+ ++P + Sbjct: 920 GRYQEAKQHYEACLKADPSFVLCHFRLAALYEAEGNEERQHAHLLQAVRLAPLRVDSEQL 979 Query: 193 -AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 A+++ L + L + + ++ + +L D+ + Sbjct: 980 AAIIEPPAL-------LEALADARPRGGDAWYYDSLGYVYGALGRNDQEKA-----AVEK 1027 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHLLSENTV 308 +L L + A L + + ++A +LE++ HP+ + + Y L + Sbjct: 1028 ALALDLDHSEVLRHYANVLSREGRTKEAIKLLERLMVR--HPDDESLYSAYVALFPKTMR 1085 Query: 309 GKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIE 368 G K RLE + E+ +V + A LL + Sbjct: 1086 GLGKLRHRLERLKIG-REAKSVVYRNAAAA------------------------LLPYLG 1120 Query: 369 QANSHNTDKILYWTQ 383 + + N + +WT+ Sbjct: 1121 EKQNENDGPVRWWTK 1135 >gi|326435668|gb|EGD81238.1| tetratricopeptide protein [Salpingoeca sp. ATCC 50818] Length = 863 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 88/281 (31%), Gaps = 57/281 (20%) Query: 129 IALAERQYNIAHEKLEMML---------QIPATR--EFAVYSLYFESCRIGDLNSAQRYA 177 ++ ++ A + L + P+T + + +E G+L+ A + Sbjct: 364 AYYSKGDFDKAIHYYKKALAITVETLGEKHPSTADSCVGL-GIAYEKK--GELDRAIAFY 420 Query: 178 TKALDI--------SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----NAKEWNRNR 225 +AL I P+ + Y ++ RAI ++ E + + Sbjct: 421 EQALAIMVEALGEKHPNTADTYNNIGSVYYSKGDYDRAIECFDKALAVRVETLGEKHPST 480 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSI----MASICA----AKSLISQNKKR 277 A DKGD + ++L + ++ ++ + + + + Sbjct: 481 AQTYNNLGGAYHDKGDYDKAIALYEKALAITVEALGEKHPSTATSYNNLGGAYARKGEYD 540 Query: 278 KAEVILEKIWKV------NPHPEIANIYTHLLS---------------ENTVGKLKRALR 316 KA EK + HP A+ Y +L + E + + Sbjct: 541 KAIACYEKALAIYAETLGEKHPSTADTYNNLGAAYVDKGQYGKAIHHYEQALAI--KVET 598 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L E + + + + + G +QA A A+ + Sbjct: 599 LGEKHPSTAMTYFNIGLLHDTRGDKEQACAYVQQALDVFAT 639 >gi|311266503|ref|XP_003131118.1| PREDICTED: transmembrane and TPR repeat-containing protein 4-like [Sus scrofa] Length = 946 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 7/133 (5%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 ++ V + EW A + ADKG+ A+ E++ Sbjct: 659 TLRCMVRSGEWRSEEQLFRSALSVCP----LNAKVHYNVGKNLADKGNQTAAIRYYREAV 714 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLK 312 +L + A L +N+ ++AE +L ++ P+ A + +L + +N++ + + Sbjct: 715 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNLGIVQNSLKRFQ 772 Query: 313 RALRLEEINKESV 325 A + + Sbjct: 773 AAEQSYRTAIKHR 785 >gi|291406105|ref|XP_002719435.1| PREDICTED: DnaJ (Hsp40) homolog, subfamily C, member 7 [Oryctolagus cuniculus] Length = 494 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L+I +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRIDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYTDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|303280738|ref|XP_003059661.1| mRNA splicing protein [Micromonas pusilla CCMP1545] gi|226458316|gb|EEH55613.1| mRNA splicing protein [Micromonas pusilla CCMP1545] Length = 939 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 85/291 (29%), Gaps = 52/291 (17%) Query: 160 LYFESCR--IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L R GD+ A+ +A + ++ + A + +E RA L + ++ Sbjct: 599 LMAAKERWLAGDVAGARDILEEAFVANSESEDIWLAAFKLEFENREPERARALLAKAREK 658 Query: 218 AKEWNR---NRAIL------------LIARSLEN---------------ADKGDMIASYH 247 R A++ L++ LE +GD+ A+ + Sbjct: 659 GGASERVWMKSAVVEREVGDVAAERRLLSEGLEKFPQFWKMWIMLGQLEEKEGDVDAARN 718 Query: 248 DAIESLKLCDNSIMASICAAKSLIS---QNKKRKAEVILEKIWKVNPHPE-IANIYTHLL 303 + + C ++I AA S N KA +LE+ NP E + Sbjct: 719 AYAKGTRRCPDAIPLWCAAAALEASPDGGNAPAKARAVLEQARLRNPANETLWLTAARQE 778 Query: 304 SEN-----TVGKLKRALRLEEIN-KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + A L +E S ++ ++ + + Sbjct: 779 RGGKPVGVDPESDRAADALMAKALQECPASGMLWAEAVRMAPRPQRKSKSVDALKRCDND 838 Query: 358 KEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYLSSVWLPL 408 + +A + + DK W A+ PD + W Sbjct: 839 PAVIASIANLFWLDRK-MDKARGWFNRAVTLNPD---------VGDHWAAY 879 >gi|170682243|ref|YP_001744738.1| TPR repeat-containing protein [Escherichia coli SMS-3-5] gi|170519961|gb|ACB18139.1| tetratricopeptide repeat protein [Escherichia coli SMS-3-5] Length = 1093 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|117621224|ref|YP_856347.1| tetratricopeptide repeat protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562631|gb|ABK39579.1| tetratricopeptide repeat family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 388 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 15/200 (7%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 + + A + L++ + ++ + E RAI +Q + R Sbjct: 48 SDESDKAVDLFIQLLEVDSETIETHLSLGNLFRQRGEVDRAIKI-HQNLVTRQLTREQRQ 106 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + L + + G + + E LCD+S A+ LI + R + ++ Sbjct: 107 LALQELARDFLAAGLLDRAEALWNE---LCDDSDYEETALAQLLIIHQQLRDWDKAIDVA 163 Query: 287 WK---------VNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 + P H + L + L + R +N + + ++++A Sbjct: 164 VRLQKFQGKKLAEPISHFYCEQAESALREGDKPAGLAKLKRALSVNPACARASLRLAELA 223 Query: 336 LEMGSIDQAHAKAMLAMKIA 355 + G +QA + + Sbjct: 224 MAAGEYEQASKDLLRVFEQD 243 Score = 36.8 bits (84), Expect = 8.8, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 77/225 (34%), Gaps = 13/225 (5%) Query: 72 LFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIAL 131 + L + + L ++ A + A + + + + L LL I Sbjct: 96 VTRQLTREQRQLALQELARDFLA--AGLLDRAEALWNELCDDSDYEETALAQLLI--IHQ 151 Query: 132 AERQYNIAHEKLEMMLQIPATREFA-VYSLYFE----SCRIGDLNSAQRYATKALDISPD 186 R ++ A + + + + + Y E + R GD + +AL ++P Sbjct: 152 QLRDWDKAIDVAVRLQKFQGKKLAEPISHFYCEQAESALREGDKPAGLAKLKRALSVNPA 211 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + + + + A E+ +A L + + ++ L D+I Sbjct: 212 CARASLRLAELAMAAGEYEQASKDLLRVFEQDIDFASEAIPFLNECYQRLGRAHDLIPLL 271 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A+E + ++ AK + ++ +A ++ + + +P Sbjct: 272 EQAVEDHAG----VSVTLALAKLVEERDGLSQARALVLRQLRRHP 312 >gi|158421607|ref|YP_001527834.1| LuxR family transcriptional regulator [Deinococcus geothermalis DSM 11300] gi|158342850|gb|ABW35136.1| predicted transcriptional regulator, LuxR family [Deinococcus geothermalis DSM 11300] Length = 955 Score = 40.3 bits (93), Expect = 0.80, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 19/184 (10%) Query: 90 TGLMSIAAHNIPLARKM------HSYVSQQHTFHNEYLVYLLEVQ--IALAERQYNIAHE 141 L + +I LA+ H+ + L +L Q I+ A R A Sbjct: 390 RALRAFREGDIGLAQATCEEGLDHARTFRDRIQLQRVLATVLVQQGRISEAGRIIRSALA 449 Query: 142 KLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP-------WVTEA 193 E + +P ++ E+ GD A + + V + Sbjct: 450 LAEALGDVPMLLNVLGLHGFQLEAQ--GDYLGALAVHERTFSLIERHRHDNNRLLLVAQR 507 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA-ILLIARSLENADKGDMIASYHDAIES 252 + A S A+ L + + +LL +RS + G A+ DA + Sbjct: 508 LASLRREAGNLSGALDILEVALQRLHRTHPEAVPVLLSSRSAVHLMAGHPGAALADAERA 567 Query: 253 LKLC 256 + L Sbjct: 568 VSLA 571 >gi|257092427|ref|YP_003166068.1| HemY domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044951|gb|ACV34139.1| HemY domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 327 Score = 40.3 bits (93), Expect = 0.81, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 27/112 (24%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M +L + +L + + + S + + ++ L Sbjct: 1 MTKLSWLLALFALAVGIALAARFNEGYLLRVLLPYRAEVSLNLAIFLVVSIFVVVYGLLR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQ 112 L+ P + +R K A + + A K Sbjct: 61 AIGLALALPNRVQAFRERRRRVKAAIAFDDAVRLLFEGRFGRALKKAGEAHA 112 >gi|4063356|gb|AAC98286.1| unknown [Myxococcus xanthus] Length = 222 Score = 40.3 bits (93), Expect = 0.81, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%) Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 + +L++ ++ +S S + K+ LE +A A+++ P ++ Sbjct: 120 SDARLEQFKKMVVDFPDSPMSHFSLGKLYLERRQYPEAAQALESAVRLDPTYAAAMVALG 179 Query: 367 IEQANSHNTDKILYWTQSALH 387 A + +DK A Sbjct: 180 DAWAGAGESDKAREVLGRARE 200 >gi|322780747|gb|EFZ10004.1| hypothetical protein SINV_16602 [Solenopsis invicta] Length = 202 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 43/138 (31%), Gaps = 4/138 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A L++ A +L + G LN A + +A+ I P Sbjct: 7 QGYIEEATRLYLKALEVFPEFAAAHSNLASVLQQQGKLNEALMHYKEAIRIQPTFADAYS 66 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + ++ A+ + + + A + + D G++ + + Sbjct: 67 NMGNTLKEMQDIQGALQCYTRAIQINPAF----ADAHSNLASIHKDSGNIPEAIQSYRTA 122 Query: 253 LKLCDNSIMASICAAKSL 270 LKL + A A L Sbjct: 123 LKLKPDFPDAYCNLAHCL 140 >gi|78066136|ref|YP_368905.1| TPR-repeat pilus assembly protein TadD [Burkholderia sp. 383] gi|77966881|gb|ABB08261.1| Flp pilus assembly protein TadD contains TPRrepeats [Burkholderia sp. 383] Length = 275 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 14/163 (8%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 LL A QY+ +L P L + GD A + + Sbjct: 90 PDTILLRADALRATGQYDAGVAAYTKLLTTP-LAARGYRGLGLTAGARGDFALAAQQLQQ 148 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++P + + + + A L + E + +L L Sbjct: 149 ATVLAPTDAATLSDLAYSQMRDGDLAGARVPLLKA----AELEQKNPKILSNFVLYLLVS 204 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 G + ++ KL A + I ++ + A + Sbjct: 205 GHGKDARRL-MDQQKLSP--------AVRGEIRDDETKIAAAM 238 >gi|17230685|ref|NP_487233.1| photosystem I assembly protein Ycf3 [Nostoc sp. PCC 7120] gi|21363092|sp|Q8YS98|YCF3_ANASP RecName: Full=Photosystem I assembly protein ycf3 gi|17132288|dbj|BAB74892.1| all3193 [Nostoc sp. PCC 7120] Length = 173 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174 E VY + A AE +Y A E E + T + +Y++ GD + A Sbjct: 33 KEAFVYYRDGMSAQAEGEYAEALEYYEEALTLEEDTNDRGYILYNMGLIYASNGDHDKAL 92 Query: 175 RYATKALDISPDAPWV--TEAVVQQYVLA-----KEWSRAITFLNQK 214 +A++++P P AV+ Y + +Q Sbjct: 93 ELYHQAIELNPRLPQALNNIAVIYHYQGEKAKETGDHDGGEALFDQA 139 >gi|87307747|ref|ZP_01089890.1| probable DNA-directed RNA polymerase alpha chain [Blastopirellula marina DSM 3645] gi|87289361|gb|EAQ81252.1| probable DNA-directed RNA polymerase alpha chain [Blastopirellula marina DSM 3645] Length = 455 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +A + E ++ +T A++ L E+ R G+ A Y KA P Sbjct: 176 ATVAALGGNPSEVVALYERAVESDSTHAGALFGLALENDRRGNDEEALGYYQKAAACFPT 235 Query: 187 APWVTEAVVQQYVLAKE 203 ++ +L+++ Sbjct: 236 HV---GTLLNLGILSED 249 >gi|300940195|ref|ZP_07154796.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] gi|300454983|gb|EFK18476.1| tetratricopeptide repeat protein [Escherichia coli MS 21-1] Length = 1093 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGHFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|291296105|ref|YP_003507503.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279] gi|290471064|gb|ADD28483.1| Tetratricopeptide TPR_2 repeat protein [Meiothermus ruber DSM 1279] Length = 354 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 39/186 (20%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKL----EMMLQIPATREFAVYSLYFESCRI 167 + +E +V L I + + +++ A + + + P+ R Y Sbjct: 165 RSLALKDEPVVRALLADIYIRQGKWDEALKHYDEAVKAAPKNPSLRI--KYGSLL--LLR 220 Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA----ITF------------- 210 G+++ A + +A+ +SP Y K+W +A Sbjct: 221 GNVDLAIEHLDQAVILSPGNAEAWLRRGDAYYEKKDWQQAGVSYQQTVALSPVRYPDAYI 280 Query: 211 -LNQKKKNAKEWNRNRAILLIARSLENADK-------------GDMIASYHDAIESLKLC 256 L Q K++ + R A +LE + GD + ++LKL Sbjct: 281 GLGQVLIELKDYQKARFNFTKAVALEQNNPVYRYWLCRANELLGDKAGAKEQCEQALKLR 340 Query: 257 DNSIMA 262 + A Sbjct: 341 PDLKEA 346 >gi|75761434|ref|ZP_00741402.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491068|gb|EAO54316.1| Tetratricopeptide repeat family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 271 Score = 40.3 bits (93), Expect = 0.82, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 59/210 (28%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKN----------------AKEWNR-------------N 224 + + W AI++ + +E+ R Sbjct: 27 LAETLSAIGNWEEAISYYEAGLEEQKDIHSLFGYAFTLYQGEEYQRAIGAWQELKELDPE 86 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 A L + + +G + SY E +K+ + S+ + A K +AE +L+ Sbjct: 87 YASLYMYLAKSYEKEGMLQESYETLHEGIKVDELSVPFYVELANIAAKLGKIVEAEEVLQ 146 Query: 285 KIWKVNP-HPEIANI--YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS- 340 K +++P H + Y ++L E E E L+ + + A++ G Sbjct: 147 KALELDPGH--LGATLKYAYILKEQ----------------EKYEDLIAIVERAIDSGEP 188 Query: 341 -----IDQAHAKAMLAMKIAP---RKEIFL 362 D A+AK L M + + Sbjct: 189 DTQLLWDLAYAKKQLEMYSDALKHYESAYT 218 >gi|256221765|ref|NP_001157779.1| plectin isoform 1g [Rattus norvegicus] Length = 4551 Score = 40.3 bits (93), Expect = 0.83, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1407 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1466 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1467 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1526 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1527 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1564 >gi|241767993|ref|ZP_04765519.1| HemY domain protein [Acidovorax delafieldii 2AN] gi|241360780|gb|EER57676.1| HemY domain protein [Acidovorax delafieldii 2AN] Length = 191 Score = 40.3 bits (93), Expect = 0.83, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 32/113 (28%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + + + + +++ W S +++ +L Sbjct: 1 MRAALWLLALFGVAVAAALFAGNNQGTITLYWPPYRIDLSLNMVVLLLVSGFVTVYAALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ 113 L P ++ + A+ L + A +RK Q Sbjct: 61 ALAALLELPHQARRWRVQQKERAMHSAMLDALTHMLAGRFLRSRKAALAALGQ 113 >gi|256085583|ref|XP_002578997.1| pre-mRNA splicing factor [Schistosoma mansoni] gi|238664393|emb|CAZ35235.1| pre-mRNA splicing factor, putative [Schistosoma mansoni] Length = 340 Score = 40.3 bits (93), Expect = 0.83, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 41/178 (23%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-- 224 GD+ +A+ +A + +P++ + A V+ KE++RA L++ +A Sbjct: 9 AGDVPAARSILARAFEANPNSEEIWLAAVKLESENKEYARARRLLDKACASASTARVWMK 68 Query: 225 ------------RAILLIARS--------------------------LENADKGDMIASY 246 +A+ ++ ++ N + + Sbjct: 69 AARLEWCLGELNKALEMLQKATLTYNQAPKLWLMLSQVYEQLSEENLKPNEAESLKERAR 128 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTHLL 303 + E L + + A+ Q KA ILEK NP PE+ L Sbjct: 129 NTYREGLNHNPHYTALWLQLARFEERQCNLTKARSILEKARSQNPKTPELWLEAIRLE 186 >gi|189424814|ref|YP_001951991.1| hypothetical protein Glov_1755 [Geobacter lovleyi SZ] gi|189421073|gb|ACD95471.1| TPR repeat-containing protein [Geobacter lovleyi SZ] Length = 265 Score = 40.3 bits (93), Expect = 0.83, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 8/149 (5%) Query: 133 ERQYNIAHEKLEM--MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 ++ A + ++ L + A+ A++ PD + Sbjct: 87 AGRHQEALAQYRAVLLIDPQDADALVSIGLVHNALDQ--TEEAKAAFRLAIEHEPDNTFA 144 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 A+ Y + + AI + + + A + + ++ D + Sbjct: 145 WNALGDLYYGSGDHKAAIEAYQKGIE--LDPTDPAAYHNLGELYYDLEEYDPAE--ENCK 200 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKA 279 ++KL + MA + + Q + + A Sbjct: 201 IAVKLAPDFSMAYLTLGGICMDQERMKDA 229 >gi|217419730|ref|ZP_03451236.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] gi|226199577|ref|ZP_03795134.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] gi|254187796|ref|ZP_04894308.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur 52237] gi|254296086|ref|ZP_04963543.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] gi|157805914|gb|EDO83084.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e] gi|157935476|gb|EDO91146.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur 52237] gi|217397034|gb|EEC37050.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576] gi|225928458|gb|EEH24488.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan 9] Length = 606 Score = 40.3 bits (93), Expect = 0.83, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 51 DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 110 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP + + VL + + A L Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 167 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 +Q+ A NR +AI+ + A + + Sbjct: 168 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 227 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L++ + + A++ L +A I V +P+ Sbjct: 228 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 283 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 284 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 343 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 A +K + ++ LAQI + +N W A Sbjct: 344 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 383 >gi|40849904|gb|AAR95664.1| plectin 10 [Rattus norvegicus] Length = 4552 Score = 40.3 bits (93), Expect = 0.83, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1408 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1467 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1468 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1527 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1528 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1565 >gi|42526637|ref|NP_971735.1| TPR domain-containing protein [Treponema denticola ATCC 35405] gi|41816830|gb|AAS11616.1| TPR domain protein [Treponema denticola ATCC 35405] Length = 725 Score = 40.3 bits (93), Expect = 0.83, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 30/278 (10%) Query: 125 LEVQIAL----AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ Q A +Q A + M ++ V + G+LNSA +KA Sbjct: 228 LDAQKAQEAERLAKQNADAKTR-AQMEEVDRLVSEGV-----NFLKNGNLNSALSSFSKA 281 Query: 181 LDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNR----------NRAIL 228 PD+ A + +++ A +K + + A Sbjct: 282 SSKMPDSETSFTAKKYLDMASALNDYASAREGTGDAEKALSDADSYIKKSVNADGQNARA 341 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 S + ++ + ++ L ++ + + K ++ +KA+ E+ K Sbjct: 342 HYVYSQIADAQKQPQVAFVELEKAQSLDPDNYLYNYELGKKYYARGHYQKAKTSFERSVK 401 Query: 289 VNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 NP + + L EN +I + V++ + +++I DQ Sbjct: 402 SNPKFDNAFFNLGMSCRKLGLENEA--FSAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQ 459 Query: 344 AHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILY 380 A A+ P +AQ+ N + Sbjct: 460 AIENYKKAISYEPTNLPALREMAQVYADLGQNNLAERH 497 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 4/185 (2%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 ++ S + +L +I A+R+++ A E + + T A+ + Sbjct: 428 SAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQAIENYKKAISYEPTNLPALREMAQVYAD 487 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 +G N A+R+ T+A+ + D + V +++ A++ + + + A Sbjct: 488 LGQNNLAERHFTEAITLGEDDAITYYNLATVQVDLEKYGEALSNAEKAYRLKP----SDA 543 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L L G +Y ++ N I + + + K +AE L Sbjct: 544 RVLYTYGLTLEKNGRKSEAYDYYTQAAATNKNYAKPRINLGRMYLDEGKFGEAEDNLLAA 603 Query: 287 WKVNP 291 +++ P Sbjct: 604 YRLEP 608 >gi|312973207|ref|ZP_07787379.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] gi|310331802|gb|EFP99037.1| tetratricopeptide repeat family protein [Escherichia coli 1827-70] Length = 843 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 265 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 324 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + +L P V VL+ A + ++ Sbjct: 325 LAARNGNFDAGLDFCQHSLRTCPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 379 >gi|300786250|ref|YP_003766541.1| hypothetical protein AMED_4366 [Amycolatopsis mediterranei U32] gi|299795764|gb|ADJ46139.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 1052 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 11/251 (4%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIG 168 + ++ Q A +Y A L+I T Sbjct: 623 RALELEPDRADMHAARGQALYALDRYPEALATFTRALEIEPDDTWLLGWRG--RVHRWQE 680 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 SA AT+ L++ PDA W + + + L A+ L + + ++ A Sbjct: 681 SYASALADATRVLELEPDADWALDERGETHRLMGHHEEALADLTRAVEIDPQYAGAFARR 740 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 A + D G + D SL++ +S++ A + A + + Sbjct: 741 GAAYA----DMGRWAEALADYDRSLEIQPSSVLTLGRRALAHRDSGNHGLAMADFARALE 796 Query: 289 VNPHPEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 +NP + TH L+ L R E++ E ++ + + ++G +++A Sbjct: 797 INPEADWIFRDRAQTHHLAGRLAEALADYDRTIELDPEYSWAVRQRALVLRDLGRLEEAL 856 Query: 346 AKAMLAMKIAP 356 + P Sbjct: 857 TSLTRLAEADP 867 Score = 36.5 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 96/277 (34%), Gaps = 12/277 (4%) Query: 87 ALYTGLMSI----AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEK 142 A L+++ AA R + E L+ L ++A AE + Sbjct: 460 ATADALVALVETAAARADQTGRWVAMVAQAGADSGREQLIA-LGARLAAAEDITALLTCL 518 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 R A +L E R D +A T+AL+ PD W + Y + Sbjct: 519 TTESALPDMARFEAHQALALEHVRKDDFAAAVEALTRALEYDPDDGWALPSRGIAYRVLG 578 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA 262 E +++ L++ + A + AR + D +L+L + Sbjct: 579 ELEKSLADLDRAAGLDPDS----AWTIGARGETLQAMQRNEEALADFDRALELEPDRADM 634 Query: 263 SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSENTVGKLKRALRLEE 319 ++L + ++ +A + ++ P + H E+ L A R+ E Sbjct: 635 HAARGQALYALDRYPEALATFTRALEIEPDDTWLLGWRGRVHRWQESYASALADATRVLE 694 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + ++ +L + MG ++A A A++I P Sbjct: 695 LEPDADWALDERGETHRLMGHHEEALADLTRAVEIDP 731 >gi|241761936|ref|ZP_04760021.1| cellulose synthase operon C domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373616|gb|EER63188.1| cellulose synthase operon C domain protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 1334 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +I + A ML+ A+ + + + G+ + A++ + ++P Sbjct: 554 ARIYQDAGLTDKAQSLYHYMLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPG 613 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 P+V A + + +A+ L + + + R Sbjct: 614 NPYVYLASARFEKSKSDDEQALKDLKKAHRVYQRMVRQ 651 >gi|218295326|ref|ZP_03496139.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23] gi|218243958|gb|EED10484.1| TPR repeat-containing protein [Thermus aquaticus Y51MC23] Length = 738 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 67/233 (28%), Gaps = 21/233 (9%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +LLE + +Y A + L+ R A L + A+ Y +AL Sbjct: 366 FLLEAEALRQAGRYREAEAAYQRALEAGEGR--AYLGLVRLFLDTVEPARARPYLEEALK 423 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITF-LNQKKKNAKEWNRNRAILLIARSLENADKGD 241 P + + + + A+ L+ + + + A+ L+ + + Sbjct: 424 RFP--EEASPLLAENLLNEGRPEEALALGLSGPRVLLRLGRPDEALALLKEAQDPGLHRP 481 Query: 242 MIASYH-------------DAIESLKLCD-NSIMASICAAKSLISQNKKRKAEVILEKIW 287 DA E L+ + A + + +S + RK +L Sbjct: 482 PQNHREGTLLRALLECVAGDAEEGLRFAERGRFEAEVLGSPFGVSLAEARKGHALLALGR 541 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 +++ L + E+ + ++A G Sbjct: 542 PAEARGAYQTALALAEGGPARLRVEALGGLAAL--GDREAYGEMVRLARAAGD 592 >gi|161869642|ref|YP_001598809.1| IgA-specific serine endopeptidase [Neisseria meningitidis 053442] gi|161595195|gb|ABX72855.1| IgA-specific serine endopeptidase [Neisseria meningitidis 053442] Length = 1787 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ Sbjct: 1128 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1172 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184 L +Q A + + + E+ R + ++ A KA ++S Sbjct: 1173 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1224 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 A A QQ LA++ A K E R A L + Sbjct: 1225 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1283 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A + + A+ +AK + R+A ++ + H + A Sbjct: 1284 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1335 Query: 303 LSENTVGKLKRALR 316 + + KR Sbjct: 1336 ---SQPQRRKRRAA 1346 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R ++K +A ++A A + ++ + E Q A R++ Sbjct: 1043 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1093 Query: 138 IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190 E E+ + R+ A + R + Q Y A P V Sbjct: 1094 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1148 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + V+ ++A L ++++ R A LL + E + +A+ A Sbjct: 1149 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1197 Query: 251 --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 E+ + AA+ Q +RKA + Sbjct: 1198 AEEAKRQ----------AAELAHRQEAERKAAEL 1221 >gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1271 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 74/218 (33%), Gaps = 8/218 (3%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 Y K Y L G ++ + A + + Y L + + ++ A Sbjct: 1031 YAKSYHNL--GFLAAQQGQLEEAISYYQQAI-ESQPDYPSAFYNLGL-VYEQLKETEKAI 1086 Query: 141 EKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 +Q+ +T SL R + A++Y AL + P + + Sbjct: 1087 ACYSHSVQLDSTNVEVYKSLAQLYDRQENYAKAEKYYRCALLLQPHNLELRYNLGVVLYE 1146 Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 +++ +A++ + + AI + + + + + ++++L + Sbjct: 1147 QEKFDKAVSCFQKIIQAKP----QDAIAYLHLGISYKQQKLLTKAKSCFEKAIELDPDYA 1202 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI 298 MA Q ++KA + + +P ++A+ Sbjct: 1203 MAYYNLGVVYSCQPDEKKAVDCFRQSLRCDPANKLAHT 1240 >gi|154489873|ref|ZP_02030134.1| hypothetical protein PARMER_00102 [Parabacteroides merdae ATCC 43184] gi|154089315|gb|EDN88359.1| hypothetical protein PARMER_00102 [Parabacteroides merdae ATCC 43184] Length = 463 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 96/281 (34%), Gaps = 20/281 (7%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 +I I A++ + V + + L ++ Y A E ++ I Sbjct: 42 AINFGRIAEAKQCYRKVLGTDSMNFYANYQL--ARLYYQLGDYGRATEHYHILASIEGEN 99 Query: 154 EFAVYSLYFESCRIG---DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + L + G + A +AL+++P+ V +++ + + A+ Sbjct: 100 PSILTGLADCHIKRGTGPNTMIALSLYARALELNPENVRVASSLINTLLRMGDGQGALQV 159 Query: 211 LNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + ++ R +L S + + + + AA+ + Sbjct: 160 CDTALFYNPDNSQIRQS--KGMALYMTKDYKQADSVYTGLLADGDSSFLNLKYAGAARYM 217 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLV 329 S +LEK ++++ ++ + + S T + KRA L ++ + +++ Sbjct: 218 SSH--ALDGVELLEKAYEIDST-DVETVMLYGASLGKTYDR-KRAYELFDLAETNMQPKK 273 Query: 330 IVSK-------IALEM-GSIDQAHAKAMLAMKIAPRKEIFL 362 + ALE G +A A K P + FL Sbjct: 274 FLVNMLTTFRGDALERDGRWPEAEKLYYAAWKEDPTQLHFL 314 >gi|133778672|gb|AAI33909.1| Tmtc4 protein [Danio rerio] Length = 490 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 +++W + A + AD+G+ A+ E+++L Sbjct: 209 RSQQWRSEQSLFTSALSVCP----LNAKVHYNVGKNLADRGNQSAAVQYYREAVRLHPKY 264 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A L +N+ ++AE +L V+ P+ A + +L Sbjct: 265 VHAMNNLGNILKERNELKEAEELLSAA--VHIQPDFAAAWMNL 305 >gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT 9303] gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT 9303] Length = 581 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 9/203 (4%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + G + R A +AL + + ++ AI N + + Sbjct: 270 ANKKGREQTMVRLADQALKLR-KTGFAYIMRAYAKNDLGDYQGAIDDQNNALEINPD--- 325 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 A+ + R L ++ GD ++ D +++K+ + MA S + + A Sbjct: 326 -NAVAYVNRGLARSNMGDPKSALSDFSKAIKIDPANAMAFSNRGVSKQALGDPQGALDDY 384 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVG---KLKRALRLEEINKESVESLVIVSKIALEMGS 340 K K++P A + + + + IN + ++ LE Sbjct: 385 NKAIKIDPRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKD 444 Query: 341 IDQAHAKAMLAMKIAPR-KEIFL 362 A A A++I + I+L Sbjct: 445 YQGAIADYNKAIRIGTQNARIYL 467 >gi|84625065|ref|YP_452437.1| hypothetical protein XOO_3408 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369005|dbj|BAE70163.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 562 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 20/250 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L +A+ Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 372 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 373 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 428 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-- 296 D+ + D + L ++ A + + ++A ++++ +P +A Sbjct: 429 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPD-NLAIV 487 Query: 297 -----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 488 DSYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEA 543 Query: 352 MKIAPRKEIF 361 ++ P Sbjct: 544 RRLDPDNRAL 553 >gi|15832669|ref|NP_311442.1| hypothetical protein ECs3415 [Escherichia coli O157:H7 str. Sakai] gi|209397136|ref|YP_002272022.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4115] gi|13362886|dbj|BAB36838.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209158536|gb|ACI35969.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4115] gi|209763060|gb|ACI79842.1| hypothetical protein ECs3415 [Escherichia coli] gi|209763062|gb|ACI79843.1| hypothetical protein ECs3415 [Escherichia coli] gi|209763066|gb|ACI79845.1| hypothetical protein ECs3415 [Escherichia coli] Length = 1124 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|325473179|gb|EGC76375.1| TPR domain-containing protein [Treponema denticola F0402] Length = 629 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 88/278 (31%), Gaps = 30/278 (10%) Query: 125 LEVQIAL----AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 L+ Q A +Q A + M ++ V + G+LNSA +KA Sbjct: 132 LDAQKAQESERLAKQNADAKTR-AQMEEVDRLVSEGV-----NFLKNGNLNSALSSFSKA 185 Query: 181 LDISPDAPWVTEAV--VQQYVLAKEWSRAITFLNQKKKNAKEWNR----------NRAIL 228 PD+ A + +++ A +K + + A Sbjct: 186 SSKMPDSETSFTAKKYLDMASALNDYASAREGTGDAEKALSDADSYIKKSVNADGQNARA 245 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 S + ++ + ++ L ++ + + K ++ +KA+ E+ K Sbjct: 246 HYVYSQIADAQKQPQVAFVELEKAQSLDPDNYLYNYELGKKYYARGHYQKAKTSFERSVK 305 Query: 289 VNPHPE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 NP + + L EN +I + V++ + +++I DQ Sbjct: 306 SNPKFDNAFFNLGMSCRKLGLENEA--FSAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQ 363 Query: 344 AHAKAMLAMKIAPRKE-IFLLLAQIEQANSHNTDKILY 380 A A+ P +AQ+ N + Sbjct: 364 AIENYKKAISYEPTNLPALREMAQVYADLGQNNLAERH 401 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 68/185 (36%), Gaps = 4/185 (2%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR 166 ++ S + +L +I A+R+++ A E + + T A+ + Sbjct: 332 SAFSSAVKIKPDYVKAFLEMARIRKAQRKFDQAIENYKKAISYEPTNLPALREMAQVYAD 391 Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 +G N A+R+ +A+ + D + V +++ A++ + + + A Sbjct: 392 LGQNNLAERHFKEAITLGEDDAITYYNLATVQVDLEKYGEALSNAEKAYRLKP----SDA 447 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 +L L G +Y ++ N I + + + K +AE L Sbjct: 448 RVLYTYGLTLEKNGRKSEAYDYYTQAAATNKNYAKPRINLGRMYLDEGKFGEAEDNLLAA 507 Query: 287 WKVNP 291 +++ P Sbjct: 508 YRLEP 512 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 72/237 (30%), Gaps = 13/237 (5%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q+ Q N+A + + + Y+L + A A KA + P Sbjct: 385 MAQVYADLGQNNLAERHFKEAITLGEDDAITYYNLATVQVDLEKYGEALSNAEKAYRLKP 444 Query: 186 ---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + ++ S A + Q K + + R L D+G Sbjct: 445 SDARVLYTYGLTLE---KNGRKSEAYDYYTQAAATNKNYAKPRINL----GRMYLDEGKF 497 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IY 299 + + + + +L N+ + K + K+ K P A Sbjct: 498 GEAEDNLLAAYRLEPNNFEVNTNLGKLYGLKGDYTKSVNHYSNAVKTQPRNITAKQNLAA 557 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ ++ + ++ +++ ++ ++ + K+ + + A + P Sbjct: 558 AYISADLKENAVSVYEQIIKVDTKNWDAYYELGKLYISLNKKADAKLILEGVLNKNP 614 >gi|301621778|ref|XP_002940222.1| PREDICTED: tetratricopeptide repeat protein 1-like [Xenopus (Silurana) tropicalis] Length = 241 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 5/100 (5%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDN 258 E+ A T Q + + AIL R+ + + D ++++L + Sbjct: 77 KNGEYPAAETVYTQALQTCPAFYSQDLAILFSNRAAARMRQNMNDLALEDCSKAIELNPD 136 Query: 259 SIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHPE 294 I A + A+ +K +A +LEK NP E Sbjct: 137 YIRALLRRAELYEKTDKLDEALADYKSVLEKDPSANPARE 176 >gi|303324457|ref|XP_003072216.1| Cell cycle control protein cwf4, putative [Coccidioides posadasii C735 delta SOWgp] gi|240111926|gb|EER30071.1| Cell cycle control protein cwf4, putative [Coccidioides posadasii C735 delta SOWgp] gi|320037256|gb|EFW19194.1| pre-mRNA-splicing factor clf1 [Coccidioides posadasii str. Silveira] Length = 671 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 73/243 (30%), Gaps = 26/243 (10%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182 +++ A + + ++P ++ ++ Y + GD +Y + + Sbjct: 257 KEHERARAIYKYALDRLPRSKSAVLHKAYTTFEKQYGDQEGVEDVILSKRRVQY-EEQVK 315 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-EN 236 +P ++ + R + R L I +L E Sbjct: 316 ENPKNYDAWFDYIRLEEASGNVERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEE 375 Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D + E LKL + A+ I Q R A L P Sbjct: 376 MENHDFGRARQIYQECLKLIPHKKFTFAKVWLLKAQFEIRQMDLRAARRTLGHALGACPK 435 Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ Y L E + + E N ++ + +++ + +++A A Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSQTQAWIKFAELERGLDDLERARAIYE 494 Query: 350 LAM 352 L + Sbjct: 495 LGI 497 >gi|254483490|ref|ZP_05096718.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] gi|214036279|gb|EEB76958.1| tetratricopeptide repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 573 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 4/139 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A +L+ + A +L + GD +A +A +A ++P+A + Sbjct: 386 AGKTPQAIAELQALTSAYPEYADAHNNLAVLLLQKGDYTAASTHAARATQLAPEAAAPWD 445 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + A +A L++ + ++ + R L D+ D + D + Sbjct: 446 ILGAAQAGAGLPDQAADSLDKSLQRRPDYWS----AHLHRGLLRVDQKDYQGAQADLEAA 501 Query: 253 LKLCDNSIMASICAAKSLI 271 L A + Sbjct: 502 LANGGPLPDAYLALGDLYA 520 >gi|171057693|ref|YP_001790042.1| tetratricopeptide repeat-containing protein [Leptothrix cholodnii SP-6] gi|170775138|gb|ACB33277.1| Tetratricopeptide TPR_4 [Leptothrix cholodnii SP-6] Length = 441 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 50/166 (30%), Gaps = 10/166 (6%) Query: 90 TGLMSIAAHNI--PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L++ A AR++ + + + + + AL+ + A L + Sbjct: 282 DALLARAEGEPAPRHARRVEAAAPARLQSLRD------QARSALSAGDADRAMALLRQAV 335 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 Q + + + GDL +A A +AL + P + E + Sbjct: 336 QAAPQDVEILADTAALAFQRGDLATAVPMARRALLLEPQHAASQFTLAMSLAALGEQHES 395 Query: 208 ITFLNQKKKN--AKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 ++ + A+ + L + ++ A+ Sbjct: 396 LSLFDGLMHADCARSFRTEHPELAAIAARQSHHLLQQQQQRSTALA 441 >gi|119173787|ref|XP_001239287.1| hypothetical protein CIMG_10309 [Coccidioides immitis RS] Length = 671 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 73/243 (30%), Gaps = 26/243 (10%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRI-GDLNSA---------QRYATKALD 182 +++ A + + ++P ++ ++ Y + GD +Y + + Sbjct: 257 KEHERARAIYKYALDRLPRSKSAVLHKAYTTFEKQYGDQEGVEDVILSKRRVQY-EEQVK 315 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN-----RNRAILLIARSL-EN 236 +P ++ + R + R L I +L E Sbjct: 316 ENPKNYDAWFDYIRLEEASGNVERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEE 375 Query: 237 ADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + D + E LKL + A+ I Q R A L P Sbjct: 376 MENHDFGRARQIYQECLKLIPHKKFTFAKVWLLKAQFEIRQMDLRAARRTLGHALGACPK 435 Query: 293 PEIANIYTHLLS---ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 ++ Y L E + + E N ++ + +++ + +++A A Sbjct: 436 DKLFRGYIDLERQLFEFVRCR-TLFEKQIEWNPSQTQAWIKFAELERGLDDLERARAIYE 494 Query: 350 LAM 352 L + Sbjct: 495 LGI 497 >gi|15803074|ref|NP_289105.1| hypothetical protein Z3825 [Escherichia coli O157:H7 EDL933] gi|12516959|gb|AAG57663.1|AE005485_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] Length = 1124 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 549 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 608 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 609 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 663 >gi|70988899|ref|XP_749301.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus fumigatus Af293] gi|66846932|gb|EAL87263.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus fumigatus Af293] gi|159128715|gb|EDP53829.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus fumigatus A1163] Length = 630 Score = 39.9 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 9/182 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q+ ++ A + + + + T F+ L ++G + SA +++ Sbjct: 417 RAQLHFILGEFAEAAKDYQKSIDLDRTFIFSHIQLGVTQYKMGSVASAMATFRRSVKNFE 476 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENAD-KGDM 242 D P V + + + +S AI ++ + K+ + LI ++L K D Sbjct: 477 DVPDVYNYYGELLLDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDF 536 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + ++L + +A A+ L+ Q K +A E+ E+A + Sbjct: 537 QEAENLCQKALIIDPECDIAVGTMAQLLLQQGKVSQALKYFERA------AELARTEAEI 590 Query: 303 LS 304 ++ Sbjct: 591 VN 592 >gi|307297487|ref|ZP_07577293.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916747|gb|EFN47129.1| tetratricopeptide TPR_2 repeat protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 356 Score = 39.9 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 59/165 (35%), Gaps = 15/165 (9%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 ++ A FL+ + N ++A + + + GD +LK+ + Sbjct: 107 ADRGDYESAQKFLDLLM----DANVDKATVCELKGSIFLESGDEEEGIKWLQNALKIDSS 162 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWK--VNPHPEIANIY-----THLLSENTVGKL 311 + A ++ ++ A W+ + P+ Y ++ + L Sbjct: 163 LVTAYSFLGQTFYNRGDFDSAA----DCWQREIAASPDHLVTYFMLTDAYINAGRMDEAL 218 Query: 312 KRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L + + +S+ + V ++++ +MG+I+ +K P Sbjct: 219 NVLKDLSKRDPDSILTKVEMAELYEKMGNIEMRRIVEDEVLKTKP 263 >gi|190893450|ref|YP_001979992.1| O-linked GlcNAc transferase [Rhizobium etli CIAT 652] gi|218514313|ref|ZP_03511153.1| probable O-linked GlcNAc transferase protein [Rhizobium etli 8C-3] gi|190698729|gb|ACE92814.1| probable O-linked GlcNAc transferase protein [Rhizobium etli CIAT 652] Length = 288 Score = 39.9 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 11/149 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A ++ A + L R + L ++ D A +KA+ ++P Sbjct: 151 AGQDDQAFNDFDRAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 203 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++P Y+ + A N +A E N N A ++L +GD + Sbjct: 204 NSPEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 259 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ L A A+ S Sbjct: 260 ARSYRHAVGLDPKYQPARDGLARVGASAG 288 >gi|159038656|ref|YP_001537909.1| fibronectin type III domain-containing protein [Salinispora arenicola CNS-205] gi|157917491|gb|ABV98918.1| Fibronectin type III domain protein [Salinispora arenicola CNS-205] Length = 528 Score = 39.9 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 77/288 (26%), Gaps = 34/288 (11%) Query: 232 RSLENADKGDMIASYHDAIESLKLC--------DNSIMASICAAKSLISQNKKRKAEVIL 283 R+L GD+ + ++++ + A+ A+ A +L Sbjct: 13 RALALRQAGDLAGARLLLTDTVESASPPYGPDHPEMLGAAHLLARLHREAGDPSSARRVL 72 Query: 284 EKIWKV----NPHPE---IANIY-THLLSENTVGKL---KRALRLEEINKE---SVESLV 329 E+ P + +A + L++ + + RL + + V Sbjct: 73 EEALAAGERCRPDDDPLMLALAFELATLADELGNRHEARRNFRRLVAAGPDVLGTDHPAV 132 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 ++ L+ A ++ + P F + + + T A Sbjct: 133 REARAYLDDAGPSPADGPSVPGPVL-PGYRAFGSVTAPVADERLAEEPVRPGTSPAPDGS 191 Query: 390 PDPLWISDDGYLSSVWLPLSPISKTLCYFE--WK----IPTKSPEYISSENINFSLEMAY 443 PD D G+L W P+ S + + W P S + + + Sbjct: 192 PD-----DSGHLVPHWPPVGSASGSSEARQQGWPQGLGSPLGSIGAGPAPGASGPDPVLE 246 Query: 444 PADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDPGIKE 491 P ++ P R G+ E Sbjct: 247 PGPARCGDGRVAADAAPSDAAPLTDAHTDPASRPSPTGRGTATNGLPE 294 Score = 38.8 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 15/142 (10%) Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDIS-----PDAPW---VTEAVVQQYVLAKEWS 205 AV + GDL A+ T ++ + PD P + + + A + S Sbjct: 7 LAAVQHRALALRQAGDLAGARLLLTDTVESASPPYGPDHPEMLGAAHLLARLHREAGDPS 66 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM---- 261 A L + + + L++A + E A D + + H+A + + + Sbjct: 67 SARRVLEEALAAGERCRPDDDPLMLALAFELATLADELGNRHEARRNFRRLVAAGPDVLG 126 Query: 262 ---ASICAAKSLISQNKKRKAE 280 ++ A++ + A+ Sbjct: 127 TDHPAVREARAYLDDAGPSPAD 148 >gi|115893595|ref|XP_001182254.1| PREDICTED: similar to transmembrane and tetratricopeptide repeat containing 2, partial [Strongylocentrotus purpuratus] Length = 149 Score = 39.9 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 3/118 (2%) Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G++ + ESL+ + + A + A L N+ +AE +LE+ + PE AN++ Sbjct: 7 GNLPEAESWFKESLRSKADHVPAHLTYANLLGKTNRATEAERLLERAVSLE--PENANVF 64 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 H +N ++ ++ + V + + G ++QA A + A+ + P Sbjct: 65 RHYAKDNEKAEVY-YRVAVDLKPDVANGHVNLGAMLHLNGKLEQAQASYLKALSLKPD 121 >gi|78064816|ref|YP_367585.1| TPR repeat-containing protein [Burkholderia sp. 383] gi|77965561|gb|ABB06941.1| TPR repeat protein [Burkholderia sp. 383] Length = 732 Score = 39.9 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 21/311 (6%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +AL L A + A+ ++ + ++ L + ++ + Sbjct: 6 QALQAALAHHEAGRLAEAKTLYDAILTAQ-PGQPDALHFLGLLACQLKQYDAGIALMEQS 64 Query: 146 MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWS 205 +++ P F G L+ A + +A+ + PD P + A+E + Sbjct: 65 LVERPDASYFNNLGNML--RENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDAREPA 122 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ + + + A + +L+ D GD + +++L + MA Sbjct: 123 AAMESCARAIELRPGY--AEAYNNLGNALQ--DLGDFDRAASHYGRAIELDPSMAMA--H 176 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL-LSENTVGKLKRA----LRLEEI 320 A S + + R AE + + P +A+ + H + + + +L A + Sbjct: 177 ANLSAVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTL 236 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 N + +S + L++ +D+A A++ P A + N + + Sbjct: 237 NPADAGACHNLSVVLLKLQRLDEALVYCRQALQAGPP-------AALMHVNLGDILRAQG 289 Query: 381 WTQSALHAMPD 391 +A+HA D Sbjct: 290 NVDAAVHAYRD 300 >gi|326928324|ref|XP_003210330.1| PREDICTED: tetratricopeptide repeat protein 1-like [Meleagris gallopavo] Length = 296 Score = 39.9 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 5/93 (5%) Query: 198 YVLAKEWSRAITFLNQKKKNAKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 E+ A + + + ++RA+L R+ + A+ +D ++++L Sbjct: 130 QFKRGEYGEAEDSYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALNDCSKAVELD 189 Query: 257 DNSIMASICAAKSLISQNKKRKAE----VILEK 285 N I A + A+ K +A ILEK Sbjct: 190 PNYIRALLRRAELHEKTEKLDEALEDYKAILEK 222 >gi|284039937|ref|YP_003389867.1| hypothetical protein Slin_5093 [Spirosoma linguale DSM 74] gi|283819230|gb|ADB41068.1| TPR repeat-containing protein [Spirosoma linguale DSM 74] Length = 590 Score = 39.9 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 62/234 (26%), Gaps = 16/234 (6%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 L Q + A E A L + GD +A+ A+ + Sbjct: 67 YLRSGQLDKAKATFEKGAAADAKNYLNNIGLAGVAMAKGDGATAKGLIDNAVAQTKSKNQ 126 Query: 190 ------VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 + + + A++ L + K+ A + + K D Sbjct: 127 DVLIRGAEMYTLSDQPKQNDPAAALSLLT--VADEKDKKNENAEIEMLMGDAYFLKNDGG 184 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL 303 + +L + N A+ + + +KA+ + + + E A Y Sbjct: 185 NAITKYENALAINPNLAEANYKIGRLYLRGKNYQKAQDFFKLAIQNDA--EFAPTYRAYA 242 Query: 304 SENTVGKLKRALR----LEEINKE--SVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +A L E L+ V++ A A Sbjct: 243 DALANSRAYKAAASNYELYVQKSGTTDPEMLLDVARYKFLAQDYQGAIAYLDQL 296 >gi|262274789|ref|ZP_06052600.1| hypothetical fimbrial biogenesis and twitching motility protein [Grimontia hollisae CIP 101886] gi|262221352|gb|EEY72666.1| hypothetical fimbrial biogenesis and twitching motility protein [Grimontia hollisae CIP 101886] Length = 251 Score = 39.9 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 12/211 (5%) Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 DA + Y+ A +W RA L + A ++ R+R + G+ + Sbjct: 34 DAAESRITLGLAYLKAGQWERARQNLETAVQFAPKYYRSRISFAYY----LQEVGEYDQA 89 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI------WKVNPHPEIANIY 299 +L+ + L Q + +A+ K +K++ E A + Sbjct: 90 EEQYKTALRHSPQNGDVRNNYGVFLCRQERYDEAQRAFAKAIEQPYYYKLSGSYENAALC 149 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK- 358 + K+ A + + S V ++++ +E +++A + K K Sbjct: 150 ALKEGDRDSAKVWFAKAI-DHEPNRPLSSVKLAQMEVEDNQLNEARIRLFHFHKRYGYKP 208 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 L+L ++E + Y A Sbjct: 209 ATLLILTELENKAGRPSQAERYANLLANTFP 239 >gi|223939851|ref|ZP_03631720.1| TPR repeat-containing protein [bacterium Ellin514] gi|223891443|gb|EEF57935.1| TPR repeat-containing protein [bacterium Ellin514] Length = 442 Score = 39.9 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 13/188 (6%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL ++P Y E ++A+ L+ R L K Sbjct: 31 ALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGDSR------AYSTRGLIYDKK 84 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 G+ + D E ++L A ++ ++ +A + ++N P+ A + Sbjct: 85 GEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELN--PKYAEAF 142 Query: 300 THLLSENTVGK-----LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + + + + + + S + +QA A+++ Sbjct: 143 FDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYSEAVRL 202 Query: 355 APRKEIFL 362 R+ ++L Sbjct: 203 NSREALYL 210 >gi|172046711|sp|Q3M690|YCF3_ANAVT RecName: Full=Photosystem I assembly protein ycf3 Length = 173 Score = 39.9 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFA--VYSLYFESCRIGDLNSAQ 174 E VY + A AE +Y A E E + T + +Y++ GD + A Sbjct: 33 KEAFVYYRDGMSAQAEGEYAEALEYYEEALTLEEDTNDRGYILYNMGLIYASNGDHDKAL 92 Query: 175 RYATKALDISPDAPWV--TEAVVQQYVLA-----KEWSRAITFLNQK 214 +A++++P P AV+ Y + +Q Sbjct: 93 ELYHQAIELNPRLPQALNNIAVIYHYKGEKAKEDGDHDGGEALFDQA 139 >gi|126307976|ref|XP_001366974.1| PREDICTED: similar to tetratricopeptide repeat protein [Monodelphis domestica] Length = 499 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 184 KILKAECLALLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 241 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 242 LRMAPDHEKACLACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 301 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R NA + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 302 YCNRGTVNAKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQFEEAVRDYEKVYQ 361 Query: 289 VN 290 Sbjct: 362 TE 363 >gi|116695367|ref|YP_840943.1| CadC family transcriptional regulator [Ralstonia eutropha H16] gi|113529866|emb|CAJ96213.1| transcriptional regulator, CadC-family [Ralstonia eutropha H16] Length = 515 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 10/155 (6%) Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 Q +A +E+ + GDL+ +AL ++P+ Sbjct: 323 QPGEIAEGTRLARLAVELGRDD---AVALTRGAHALGHLTGDLDGGIALFDRALLLNPNH 379 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNA---KEWNRNRAILLIARSLENADKGDMIA 244 + E AI +L + + + E R +A +L + G A Sbjct: 380 APAWSLCGCLHACRGETDAAIKYLARAVRLSPLDPEMFRMQA----GMALAHFFAGRFDA 435 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + A + + + A S + KA Sbjct: 436 ASDWAERAKCNLPSFLAPVGILAASHALAGRMDKA 470 >gi|111019382|ref|YP_702354.1| transcriptional regulator [Rhodococcus jostii RHA1] gi|110818912|gb|ABG94196.1| probable transcriptional regulator [Rhodococcus jostii RHA1] Length = 900 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 78/272 (28%), Gaps = 48/272 (17%) Query: 132 AERQYNIAHEKLEMM-----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS-- 184 A + A + + L + R + D SA++ A+ + Sbjct: 515 ATGRIVEARAAYDTLSAKIALGAQSQRFDMARGWLDLAL--DDPESARQELESAVPTAFR 572 Query: 185 ----PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENAD 238 + W + + +WS AI +++ ++ + R ++ + +A Sbjct: 573 MGSTRISLWAQAWLARTQFALGDWSGAIATVDRAAHQLEDAALDLVRPLVHWTGAQTHAL 632 Query: 239 KGDMIASYHDAIESLKLCDN----SIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-- 292 +G+ A+ + + I +S+ A+ Q LE + +++P Sbjct: 633 RGNWPAAQEHLRLAAASSHDYPMMFIPSSLARAQCAEVQADYAAVIRALEPLTRLHPREG 692 Query: 293 ---------PEI-------------ANIYTHLLSENTVGKLKRALRLEEINKESVESLVI 330 P++ A+ + E + R+ V Sbjct: 693 IDEPGFWQWPDVYANALVMAGRVDDADAFLTPHEERASERGHRS---AMARLGYARGRVA 749 Query: 331 VSKIALEMGS--IDQAHAKAMLAMKIAPRKEI 360 ++ ++ + A R + Sbjct: 750 GARGDIDAARDVFETALTHLDTLPLPYDRARV 781 >gi|110635134|ref|YP_675342.1| TPR repeat-containing protein [Mesorhizobium sp. BNC1] gi|110286118|gb|ABG64177.1| TPR repeat [Chelativorans sp. BNC1] Length = 291 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 8/147 (5%) Query: 130 ALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + A + E +Q+ T R + L +++ G A KA+ ++PD Sbjct: 144 YRLAGRSTEAFQDFEKAIQLDTTDPRAYHRRGLLYQA--SGQHQYAIEDFAKAISLAPDQ 201 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 P+ Y+ + A T N + N A ++L +G+M + Sbjct: 202 PYGYNGRGLSYLALGDDENAFTDFNTAIR----LNEQLAESWANQALVYEKRGEMDKAAR 257 Query: 248 DAIESLKLCDNSIMASICAAKSLISQN 274 +L L N A A++ + Sbjct: 258 SYARALSLDANYTPARDGVARTQGAGG 284 >gi|264677559|ref|YP_003277465.1| hypothetical protein CtCNB1_1423 [Comamonas testosteroni CNB-2] gi|262208071|gb|ACY32169.1| Tetratricopeptide TPR_4 [Comamonas testosteroni CNB-2] Length = 385 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 45/113 (39%), Gaps = 4/113 (3%) Query: 177 ATKAL---DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232 A +AL + + A++ Y +++W++A + + + + +++ A L Sbjct: 128 AEEALNRLEGTQYEGEARLALLAIYERSRDWAQAAAIVRKMQAAGQGDFSTRLAHYLCED 187 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + G + ++ ++L+ + + A+ Q + +A L+ Sbjct: 188 AQSQVAHGQLDKAFAQLQQALETAPQAPRPRLELAQLQHRQGRSAQALSSLQA 240 >gi|256221435|ref|NP_071796.2| plectin isoform 1 [Rattus norvegicus] Length = 4687 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1602 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1603 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1662 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1663 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1700 >gi|212703178|ref|ZP_03311306.1| hypothetical protein DESPIG_01220 [Desulfovibrio piger ATCC 29098] gi|212673444|gb|EEB33927.1| hypothetical protein DESPIG_01220 [Desulfovibrio piger ATCC 29098] Length = 576 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 14/257 (5%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATR---EFAVYSLYFES 164 + + + L E ++ A L+ ML P + + + Sbjct: 279 KALKYFRKGPDAAAFKLTAISMFLESRHYLQAERLLKEMLDEPGVPPDVFLMLAGIARDQ 338 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R D A + + SP A Q A + A+ + ++ ++ + Sbjct: 339 RR--DTELALSWLARIPATSPTAVQAEGLKAQILADAGKEKEALASV----RDLQQRHAR 392 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 LL+ A M + A +++++ S + L S K+ +A +++ Sbjct: 393 NETLLLLEVRLLARLKAMDEALARARQAVEIVPESSELAFTLGSLLDSLGKRDEAMKVMQ 452 Query: 285 KIWKVNPHPEIANIY----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 I +P A Y + ++ L+ R + + + + ++ +G Sbjct: 453 GIIASHPEHYQALNYVGYSLAVQGKDLEHALELLQRADRLAPDQFFIVDSLAWALFRLGR 512 Query: 341 IDQAHAKAMLAMKIAPR 357 ++A A+ + P Sbjct: 513 TEEALQTIRRAVALVPS 529 >gi|184201355|ref|YP_001855562.1| putative glycosyltransferase [Kocuria rhizophila DC2201] gi|183581585|dbj|BAG30056.1| putative glycosyltransferase [Kocuria rhizophila DC2201] Length = 345 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 8/83 (9%) Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + K RL + + S ++ A+ G A A ++ P + L A Sbjct: 258 SPEERDKLLTRLRNGSPLAAASD---AEQAMREGRTRDAREHLETAARMMPSQRRVALKA 314 Query: 366 QIEQANSHNTDKILYWTQSALHA 388 +I + ++W A Sbjct: 315 RIARVPGG-----MHWLVRRQRA 332 >gi|149022136|gb|EDL79030.1| similar to tetratricopeptide repeat domain 21B (predicted) [Rattus norvegicus] Length = 933 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 39/320 (12%), Positives = 101/320 (31%), Gaps = 66/320 (20%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA------------- 139 +++A + A M V+ + Q E + +A Sbjct: 603 LALAQGDTERALSMLRNVTTE--------------QPYFIEAKEKMADIYLKHRKEKMLY 648 Query: 140 HEKLEMMLQI-PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + + P+ R F + I + A +AL+ +P + + + Sbjct: 649 ITCYREIAERMPSPRSFLLLG--DAYMNIQEPEEAIVAYEQALNQNPKDGTLARKIGKAL 706 Query: 199 VLAKEWSRAITFLNQKKKNAKE----------------WNRNRAILLIARSLENADK--G 240 V +S+AIT+ K+ ++ + + +L + + + ++ Sbjct: 707 VKTHNYSKAITYYEAALKSGQQNCLCYDLAELLLRLKLYEKAEKVLQHSLAHDPVNELSA 766 Query: 241 DMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-------HP 293 M+ + + AA + + R IL+++ P H Sbjct: 767 LMVDGRSQVLLAKVYSKMERPGDAIAALQQARELQAR----ILKRVQMEQPDAVPSQRHF 822 Query: 294 EIANIYTHLLSENTVGK-LKRALRLEEINKESVES----LVIVSKIALEMGSIDQAHAKA 348 A I + + + ++A+ E+ ++ ++++ L +D + Sbjct: 823 A-AEICAEIAKHSAAQRDYEKAITFYREALVHCETDSKIMLELAQLYLAQEDLDASLRHC 881 Query: 349 MLAMKIAPR-KEIFLLLAQI 367 L ++ + +L+A + Sbjct: 882 ALLLQRDQDNEPATMLMADL 901 >gi|40849896|gb|AAR95660.1| plectin 6 [Rattus norvegicus] Length = 4688 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1544 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1603 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1604 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1663 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1664 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1701 >gi|71407511|ref|XP_806219.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70869899|gb|EAN84368.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 646 Score = 39.9 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 A VQ+ + + A+ L++ NR ++L +R+ N G + DA+ Sbjct: 221 QLAAVQKSLSEGAYEEALKLLDK--LPLNAVNRVDILVLRSRA--NIFLGRYEEALKDAL 276 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 E+++ + ++ AA++ K KA + + + PH Sbjct: 277 EAIEEEPRWVKGNLAAARAFSGLCKFEKAAQQIHRAMLLLPH 318 >gi|323166986|gb|EFZ52725.1| cellulose synthase operon C domain protein [Shigella sonnei 53G] Length = 531 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 57/161 (35%), Gaps = 4/161 (2%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + AL + A + + T +AV L + D +A+RY + L + Sbjct: 340 QGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDS 399 Query: 186 DAPWV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKE--WNRNRAILLIARSLENADKGD 241 A + + ++ I L+ ++ + + + L ++ ++G Sbjct: 400 GNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGK 459 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + L L S+ + ++ L ++ +A+ + Sbjct: 460 WAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTL 500 >gi|309792402|ref|ZP_07686869.1| Tetratricopeptide TPR_2 repeat protein [Oscillochloris trichoides DG6] gi|308225557|gb|EFO79318.1| Tetratricopeptide TPR_2 repeat protein [Oscillochloris trichoides DG6] Length = 1091 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 29/198 (14%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 E+ R G + + A +AL P A + RA+ + Sbjct: 16 REAARGGRWEESLKSAIRALQEFPQDTDARIAAAVALFNTGKLDRALQIFT----ELRAA 71 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 + N A L + ++ +G+ A+ A ISQ + +A Sbjct: 72 DPNNAFHLNYIAQGHSRQGNTQAAIESYRA--------------LADLHISQRRPAQAVE 117 Query: 282 ILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSI 341 L +I + P ++ +L R +++ + +++ E Sbjct: 118 PLREILNLRP-----------DMDDQRQRLARLFEEIGSVRDAANEYLALARRLHEAQQY 166 Query: 342 DQAHAKAMLAMKIAPRKE 359 D+A A +++ P Sbjct: 167 DRAAEAAETVLRLDPNSR 184 >gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 652 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 51/178 (28%), Gaps = 6/178 (3%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 ++ L+ + A E ++ + TR A +G A +++ Sbjct: 453 IHFLKGCSLEMLGRAEEALTAFEQVIHLEPTRISAYSHKGILLRTLGRHEEALEAFEQSI 512 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + P +A + A+ Q + A + ++ L Sbjct: 513 RLDPTNADAYQAKGEVLDTLGRLEEALEAFEQSIRLNP----KDASVYFSKGLTLWGLKH 568 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 M + + +++L + L +A LE ++ P A Y Sbjct: 569 MEEALANFEYAIQLDPKNATFYRTKGILLRIIGHNEEALTALEYAVQLR--PNDAEAY 624 >gi|289618999|emb|CBI54267.1| unnamed protein product [Sordaria macrospora] Length = 734 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 15/186 (8%) Query: 134 RQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + ++ A + + + P +++ L +I D + L P Sbjct: 91 KNFDEAIKAYKFALKLEPESQQI-QRDLAVLQVQIRDYQGYVQSRFAMLKAKPHLRQNWT 149 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEW----NRNRAILLIARSLENADKGDMIASYHD 248 A+ Y L +A L +K+ ++ + L+ ++ A++GD+ + Sbjct: 150 ALAIAYQLEGSLEQAENILTTYEKSMTNVPLKTDQEHSEALLYKNTIIAERGDIQRALEH 209 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV----NP-HPEIANIYTHLL 303 K C + + A+ L N+K +A W+ NP HPE L Sbjct: 210 LDSDCKNCLDRLAVMEMRARYLSQLNRKEEAAK----AWRALLDRNPEHPEYYEGLIEAL 265 Query: 304 SENTVG 309 + Sbjct: 266 EIDEKD 271 >gi|268317073|ref|YP_003290792.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] gi|262334607|gb|ACY48404.1| outer membrane assembly lipoprotein YfiO [Rhodothermus marinus DSM 4252] Length = 1000 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 30/288 (10%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI-PAT--REFA 156 P A + + + + Q Y A +L+ P + RE A Sbjct: 566 YPEAIRYYRQAAAEGESDY---ALYQIGQAYYNAGNYEEALRTFNRLLEEHPESTWREEA 622 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT-------EAVVQQYVLAKEWSRAIT 209 +Y + + + + A + L+++P+ P +A+ L + Sbjct: 623 LYQIGYIHFLNQEYDQAIAAYRRLLELAPNDPLAAKAQYGIGDALFNAGRLEAAVNAYKR 682 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDM-IASYHDAIESLKLCDNSIMASICAAK 268 L + ++ + +I + N + I S+ A ++ D A+ Sbjct: 683 VLERYPQSPFVADAATSIHFALIAAGNEARAQALIDSFATAYPDTRIVDELR---FRRAE 739 Query: 269 SLISQNKKRKAEVILEKIWKVNPHPE--------IANIYTHLLSENTVGKLKRALRLEEI 320 +L + +A LE + + P+ +A +Y + + +L Sbjct: 740 ALYRSGRSEEAIRALEAFVRGSHAPDLMGEALYYLATLYAEQELYDEAERT--LQQLLAA 797 Query: 321 NKES---VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + E E+L+++ + L+ + A +AP + L A Sbjct: 798 HAEHRRMPEALLLLGNVQLKQERYEAALVSFRRLASMAPERSELLARA 845 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 28/203 (13%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN--ADKGDM 242 P P + + + A L + A + + + +L D G Sbjct: 64 PRVPEALFYEAEARLALGQTDEAAALL---RVFAARYPTHPLVYEAQLALGKYFFDTGRY 120 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLI-------SQNKKRKAE---VILEKIW---KV 289 + ++L+ + A+ AA++L + +A L + ++ Sbjct: 121 DDARQAFGQALR--PG-VPAT-QAARALFWMAESAQRLGRPAEAIGYYRRLADTYPNTRL 176 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESL---VIVSKIALEMGSIDQA-- 344 P +A YT + + L + E+ + ++++ E+G +A Sbjct: 177 APQALLAMAYTQVEMGAYDEAARTFEVLAARYPAAPEARGLGLALAQVYYELGDYRRAID 236 Query: 345 -HAKAMLAMKIAPRKEIFLLLAQ 366 + + +K +++ +LLLA+ Sbjct: 237 EVQRRLPDLKGEAQQQAWLLLAE 259 Score = 37.6 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 3/95 (3%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLL-EVQIALAERQYNIAHEKLEMMLQI--PATRE 154 AR+ + + + + LL + ++A AE + + A ++ Sbjct: 857 GRFAEARQALTEAQARFPEDGQPAILLLGQARLAEAEGRPDEAERLYRAVVGRAQDEAGA 916 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A+Y L R GD + A ++ + P P Sbjct: 917 EALYRLGELLLRRGDPHRAIEELSRLPTLFPGYPE 951 >gi|229017501|ref|ZP_04174402.1| hypothetical protein bcere0030_20540 [Bacillus cereus AH1273] gi|228743825|gb|EEL93926.1| hypothetical protein bcere0030_20540 [Bacillus cereus AH1273] Length = 1400 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 28/213 (13%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS---------YHDAIE---- 251 A+ L KK A + R +E S + A E Sbjct: 1098 RDALHTLKVKKAERSMAFMYAAAAITERWIERQQNEQPKKSIFTRAFYRMKNRAKEISMI 1157 Query: 252 ---------SLKLCDNSIMASICAAKSLISQNKKRKAEVIL----EKIWKVNPHPEIANI 298 SLKL + MA+ A + ++A +L E W + ++ N+ Sbjct: 1158 TTIIDLYEISLKLNPKNSMAARRFAIFYENAAMNKEAIEVLQTSLENKWDYDVAKQLVNL 1217 Query: 299 YTHLLSEN-TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP- 356 + E L+ ++ + ++L++ +++ L+ G +A + P Sbjct: 1218 FIECEEEGMLRDALELTKQMVRELPDDYDTLLLQAQVFLKAGEERKAEKICLQLTGKTPF 1277 Query: 357 RKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 FL LA+I Q+ D I +A+ Sbjct: 1278 VSRGFLTLAEIYQSQERFEDAIHLLEDAAVDHP 1310 >gi|149922926|ref|ZP_01911347.1| hypothetical protein PPSIR1_27743 [Plesiocystis pacifica SIR-1] gi|149816243|gb|EDM75749.1| hypothetical protein PPSIR1_27743 [Plesiocystis pacifica SIR-1] Length = 335 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 10/130 (7%) Query: 126 EVQIALAERQYNIAHEKLEMM----LQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 + + AL + + A LE + R + +L + GD++ A +AL Sbjct: 3 QARAALEQGDFEGAQRLLEAAATGGANMEDPRLLHLGALL--AWAGGDIDEAVSSFERAL 60 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK----EWNRNRAILLIARSLENA 237 P P + + Y + A L + + +R +LL+A++ Sbjct: 61 AAKPVEPRLYVDAGELYADMMNFDDAEDVLRTALEREDLELNKEDRAEVLLLLAQTRLAH 120 Query: 238 DKGDMIASYH 247 D + Sbjct: 121 LDADPEEALE 130 >gi|154345658|ref|XP_001568766.1| N-acetyltransferase subunit Nat1 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066108|emb|CAM43897.1| putative N-acetyltransferase subunit Nat1 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 711 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%) Query: 157 VYSLYFESCRI---GDLNSAQRYATKAL-------DISP-DAPWVTEAVVQQYVLAKEWS 205 + SLY ++ R GD + +A + SP WV + Y +++ Sbjct: 337 LKSLYVDAERAAKMGDFFATLEQELEAKDFSRFGGEASPCYILWVRTFLASHYRRTGDYA 396 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A ++ + + +L + ++ A +G + A + +L + Sbjct: 397 LAHAYIEKAIAHTPTLE----LLYLEKAKILAREGKTAEAAEQADMARRLDLQDKYLNSK 452 Query: 266 AAKSLISQNKKRKAEV 281 AAK N+ K E Sbjct: 453 AAKYYFRDNQVEKGEA 468 >gi|94969691|ref|YP_591739.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94551741|gb|ABF41665.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 537 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 46/187 (24%) Query: 176 YATKALDISPDAPWVTEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 Y+ +A + + D +A+V A+ W + A E+++N +L Sbjct: 372 YSAEADNDARDKGLAWQAIVNSGMTDAQPEAERW----------LRKASEYDKNDPAVLS 421 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A + + +GD + +L L + + A A R+A + E ++ Sbjct: 422 ALAFLSQKRGDTETARALYTSALSLNPSELDAENNLAILEARAGHTRRAVELWEDAFRRA 481 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 P + ++ G D A Sbjct: 482 P-------------------------------GHSGIGMNLALAFCSTGQYDAARQFTTR 510 Query: 351 AMKIAPR 357 ++ P Sbjct: 511 VLEFNPD 517 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 13/153 (8%) Query: 81 YDKG--YKALYTGLMSIAAH--NI-PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ 135 DKG ++A+ + + + P A + S+ L L ++ Sbjct: 381 RDKGLAWQAI------VNSGMTDAQPEAERWLRKASEYDKNDPAVLSAL--AFLSQKRGD 432 Query: 136 YNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 A L + + A +L R G A A +P + + Sbjct: 433 TETARALYTSALSLNPSELDAENNLAILEARAGHTRRAVELWEDAFRRAPGHSGIGMNLA 492 Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 + ++ A F + + + R +L Sbjct: 493 LAFCSTGQYDAARQFTTRVLEFNPDLPAARHLL 525 >gi|56551981|ref|YP_162820.1| cellulose synthase operon C domain-containing protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56543555|gb|AAV89709.1| cellulose synthase operon C domain protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 1336 Score = 39.9 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +I + A ML+ A+ + + + G+ + A++ + ++P Sbjct: 554 ARIYQDAGLTDKAQSLYHYMLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPG 613 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 P+V A + + +A+ L + + + R Sbjct: 614 NPYVYLASARFEKSKSDDEQALKDLKKAHRVYQRMVRQ 651 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 28/249 (11%) Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIP--ATREFAVY--SLYFESCRIGDLNSAQR 175 + + + + A L + P + + + L ++GD+ A Sbjct: 402 INIALARAKRMSLYGRRGDAIGLLRSLANDPNRSISQLGMIADGL----LQLGDVEDAAF 457 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-----NQKKKNAKEWNRNRAILLI 230 A +L + +A + + + A F+ + + + L I Sbjct: 458 LAEHSLSLPLGEANDYQASLSVLIRTGHYDTASDFISQIASEMSRHDQNGYKMLNRTLAI 517 Query: 231 ARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 AR+ K + + H A E DN + A+ KA+ + + Sbjct: 518 ARADMMRQKKLYMPAFDVLHQAWEETGGGDNILP---VLARIYQDAGLTDKAQSL--YHY 572 Query: 288 KVNPHPEIANIYTH----LLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSID 342 + HP A+ + + + ++A RL+++ + + ++ + Sbjct: 573 MLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPGNPYVYLASARFEKSKSDDE 632 Query: 343 QAHAKAMLA 351 QA A Sbjct: 633 QALKDLKKA 641 >gi|311267211|ref|XP_003131457.1| PREDICTED: dnaJ homolog subfamily C member 7-like [Sus scrofa] Length = 494 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTHAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|254524873|ref|ZP_05136928.1| type IV pilus biogenesis/stability protein PilW [Stenotrophomonas sp. SKA14] gi|219722464|gb|EED40989.1| type IV pilus biogenesis/stability protein PilW [Stenotrophomonas sp. SKA14] Length = 261 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 8/146 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+A + + G++ A+ A E+ KL + A + A + + +A + + Sbjct: 56 LLALAARDMQVGNLDAAERKAREAQKLAPEAPDALVLLAGIDERRGRTPQAGESFRRAAE 115 Query: 289 VNPHP-EI-----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + P +I A + ++ RAL+ E+ AL+ G + Sbjct: 116 LAPQRGDILNNYGAWLCQQGRPAESLVWFDRALQAPGYAT-PAEAQANAGGCALDAGQFE 174 Query: 343 QAHAKAMLAMKIAPRKEIFL-LLAQI 367 +A A+ P + L +AQ+ Sbjct: 175 RAERDLRAALTTLPDNPVALEAMAQL 200 >gi|281356693|ref|ZP_06243184.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548] gi|281316820|gb|EFB00843.1| TPR repeat-containing protein [Victivallis vadensis ATCC BAA-548] Length = 837 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 87/277 (31%), Gaps = 26/277 (9%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPAT---REFAVYSLYFE--SCRIGDLNSAQRYATKA 180 A A + +A +++ T R Y L+ E +A T A Sbjct: 364 AAVTAQAAGRPEVARRMYRYLIEQAETPDQRLEGNY-LFGEYSFREKNFRQAANLLKTVA 422 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 S A ++Q V K + A +++ + R+L G Sbjct: 423 DSGSNRADAARYRLLQSLVELKRYKEAEPVAEALRRS--PVQTHATSADFYRALLLEKAG 480 Query: 241 DMIASYHDAIESLKLCDNS--IMASIC-AAKSLISQNKKRKAEVILEKIWKVNPHPEI-- 295 + + ++ L +S ++ AA+ + + A + + NP + Sbjct: 481 HSAEARSEYLKFLVAHPDSEYSPRALFSAAELAMELREYPAAVREFFEFAEKNPKSDSAP 540 Query: 296 ANIYTHLLSE----NTVGKLKRALRLEEINKESV---ESLVIVSKIALEMGSIDQAHAKA 348 A +Y + S N + LE+ ES ES + ++ + D A A+ Sbjct: 541 AALYQAMQSGYFARNAAETRRAIELLEKKYPESPVVIESRLQLADYLIRDADYDGALAQL 600 Query: 349 M-----LAMKIAPRKEIFLL-LAQIEQANSHNTDKIL 379 A K L A+I + + D + Sbjct: 601 AEVEKYPAAKSPETASELLYDHARIARLQRQDEDALK 637 >gi|149066132|gb|EDM16005.1| rCG59523, isoform CRA_c [Rattus norvegicus] Length = 4687 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1602 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1603 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1662 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1663 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1700 >gi|148668310|gb|EDL00640.1| transmembrane and tetratricopeptide repeat containing 4, isoform CRA_d [Mus musculus] Length = 798 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 516 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 571 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 572 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 624 >gi|40849888|gb|AAR95656.1| plectin 2 [Rattus norvegicus] Length = 4536 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1392 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1451 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1452 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1511 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1512 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1549 >gi|77359077|ref|YP_338652.1| heme biosynthesis protein [Pseudoalteromonas haloplanktis TAC125] gi|76873988|emb|CAI85209.1| putative HemY (Uncharacterized enzyme of heme biosynthesis); by synteny may be involved in heme biosynthesis or transport [Pseudoalteromonas haloplanktis TAC125] Length = 368 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 24/75 (32%) Query: 21 VSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRN 80 + V I++ N + + L L + + R+ S H R+ Sbjct: 21 LLDEKGYVLISFNNTTIEGTIVSFAVLTIAVLVVSYLTYKLVRYLFSIYRNTKHSFFARS 80 Query: 81 YDKGYKALYTGLMSI 95 + A+ L S+ Sbjct: 81 QGRKQAAIEQALWSV 95 >gi|299746718|ref|XP_001840503.2| hypothetical protein CC1G_07233 [Coprinopsis cinerea okayama7#130] gi|298407187|gb|EAU81303.2| hypothetical protein CC1G_07233 [Coprinopsis cinerea okayama7#130] Length = 889 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 38/147 (25%), Gaps = 30/147 (20%) Query: 167 IGDLNSAQRYATKALDISPD-----------APWVTEAVVQQYVLAKEWSRAITFLNQK- 214 G A + KAL + P + +A + +RA+ Q Sbjct: 307 EGAHEEATQLVQKALALKPSPHTERFYPLRTMAYAYQARYNHLRDPNDLARALDAFQQAC 366 Query: 215 -KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS---------- 263 R R L A ++ + ++ L I S Sbjct: 367 TYPTGVTLERFRTTLAWAAFALEKNRDQHHWALTAYRHAVSLLPRLIPFSKNMASRRNIL 426 Query: 264 -------ICAAKSLISQNKKRKAEVIL 283 AA+ I + +A +L Sbjct: 427 LHSRGLGATAARVAIELGELEEAVTLL 453 >gi|256221751|ref|NP_001157776.1| plectin isoform 1b [Rattus norvegicus] Length = 4544 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1459 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1460 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1519 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1520 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1557 >gi|256221662|ref|NP_001157769.1| plectin isoform 1f [Rattus norvegicus] Length = 4535 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1391 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1450 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1451 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1510 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1511 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1548 >gi|167645614|ref|YP_001683277.1| TPR repeat-containing protein [Caulobacter sp. K31] gi|167348044|gb|ABZ70779.1| Tetratricopeptide TPR_2 repeat protein [Caulobacter sp. K31] Length = 460 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 9/165 (5%) Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 +ARS ++GD A+ E+LKL + +A + A L + A ++ + Sbjct: 46 LARSYVEQERGDNRAARASLDEALKLQPDFPLARLTRAMVLSDLKETDAAIADIDALGAF 105 Query: 290 NPHPEIANIYTHL--LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P +I + + + L + +S ++ + + + A Sbjct: 106 TPPDQILRMKIDIFRTGGRYREAIDAGKALVALKPDSADAYRRLGHARQASENEAEGKAA 165 Query: 348 AML---AMKIAPRK-EIFLLLAQIEQANSHNTDKIL---YWTQSA 385 A+K+ P +++ L +I A W A Sbjct: 166 LADYDKALKLDPDMLKVYALRGEILSARRDVKGVERNYQAWLAKA 210 >gi|40849900|gb|AAR95662.1| plectin 8 [Rattus norvegicus] Length = 4545 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1401 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1460 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1461 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1520 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1521 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1558 >gi|40849906|gb|AAR95665.1| plectin 11 [Rattus norvegicus] Length = 4545 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1401 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1460 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1461 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1520 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1521 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1558 >gi|262206280|ref|NP_003306.3| dnaJ homolog subfamily C member 7 isoform 1 [Homo sapiens] gi|46397879|sp|Q99615|DNJC7_HUMAN RecName: Full=DnaJ homolog subfamily C member 7; AltName: Full=Tetratricopeptide repeat protein 2; Short=TPR repeat protein 2 gi|40225850|gb|AAH11837.2| DNAJC7 protein [Homo sapiens] Length = 494 Score = 39.9 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|256221767|ref|NP_001157780.1| plectin isoform 1a [Rattus norvegicus] Length = 4544 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1459 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1460 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1519 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1520 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1557 >gi|256221749|ref|NP_001157775.1| plectin isoform 1d [Rattus norvegicus] Length = 4512 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1368 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1427 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1428 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1487 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1488 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1525 >gi|256221664|ref|NP_001157770.1| plectin isoform 1e [Rattus norvegicus] Length = 4522 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1378 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1437 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1438 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1497 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1498 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1535 >gi|225470942|ref|XP_002264247.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297745492|emb|CBI40572.3| unnamed protein product [Vitis vinifera] Length = 596 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 52/206 (25%) Query: 228 LLIARSLENADKGD-MIASYHDAIESLKL---------CDNSIMASICAAKSLISQNKKR 277 L+ + + GD + AI + + + M A S + Sbjct: 85 FLLKMARDTIASGDSPSKALDFAIRAARSFESCSGSEPSLDLAMCLHVVAAIHCSLGRFE 144 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLL-----------SENTVGKLKRA------------ 314 +A +LE+ +V P++A H L S + +G+L R+ Sbjct: 145 EAVPVLERAIRV---PDLAKGSDHALAMFSGYMQLGDSHSMLGQLDRSVSAYESGLKIQT 201 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQA-----------HAKAMLA-MKIAPRKEIFL 362 L E + E+ ++++ ++ D+A + A ++ A + Sbjct: 202 ETLGESDPRVAETCRYLAEVHVQALQFDEAENLCKKTLEIHREHSEPASLEEAADRR--- 258 Query: 363 LLAQIEQANSHNTDKILYWTQSALHA 388 L+A I +A + + L A A Sbjct: 259 LMALICEAKR-DYEAALEHLVLASMA 283 >gi|115359734|ref|YP_776872.1| serine/threonine protein kinase [Burkholderia ambifaria AMMD] gi|115285022|gb|ABI90538.1| serine/threonine protein kinase [Burkholderia ambifaria AMMD] Length = 1348 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 16/162 (9%), Positives = 43/162 (26%), Gaps = 6/162 (3%) Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT---REFAV 157 +AR+ + + L + + A +L++ R Sbjct: 1163 AMAREAVYCATCLDHLPTLGVTMLYLARTYQLAGDRDAARSLSVALLRLSEAHRLRAVGH 1222 Query: 158 YSLYFESCRIGDLNSAQRY--ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 Y+ + D + A + + + + ++ A+ + Q Sbjct: 1223 YAAIIHAWTQEDRAGVVAHLDAQRQSGGLLGLTYYASLLAELDAARGDYGAALAQIRQCL 1282 Query: 216 K-NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 R L+ + E + D A+++ + Sbjct: 1283 AWCESTGERYYEAQLLLKECEYLRRADPRCGGVAALDACRRA 1324 >gi|40849890|gb|AAR95657.1| plectin 3 [Rattus norvegicus] Length = 4523 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1379 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1438 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1439 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1498 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1499 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1536 >gi|40849886|gb|AAR95655.1| plectin 1 [Rattus norvegicus] Length = 4574 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1430 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1489 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1490 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1549 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1550 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1587 >gi|40849898|gb|AAR95661.1| plectin 7 [Rattus norvegicus] Length = 4513 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1369 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1428 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1429 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1488 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1489 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1526 >gi|53718164|ref|YP_107150.1| hypothetical protein BPSL0525 [Burkholderia pseudomallei K96243] gi|53724081|ref|YP_104601.1| TPR domain-containing protein [Burkholderia mallei ATCC 23344] gi|76810361|ref|YP_332170.1| hypothetical protein BURPS1710b_0757 [Burkholderia pseudomallei 1710b] gi|121600080|ref|YP_991436.1| TPR domain-containing protein [Burkholderia mallei SAVP1] gi|124385353|ref|YP_001027488.1| TPR domain-containing protein [Burkholderia mallei NCTC 10229] gi|126439979|ref|YP_001057625.1| TPR repeat-containing protein [Burkholderia pseudomallei 668] gi|126448388|ref|YP_001082454.1| TPR domain-containing protein [Burkholderia mallei NCTC 10247] gi|126452823|ref|YP_001064871.1| TPR repeat-containing protein [Burkholderia pseudomallei 1106a] gi|134279447|ref|ZP_01766159.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] gi|237810775|ref|YP_002895226.1| TPR domain protein [Burkholderia pseudomallei MSHR346] gi|238561327|ref|ZP_00442181.2| TPR domain protein [Burkholderia mallei GB8 horse 4] gi|242314624|ref|ZP_04813640.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] gi|251767334|ref|ZP_04820068.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20] gi|254174735|ref|ZP_04881396.1| TPR domain protein [Burkholderia mallei ATCC 10399] gi|254181863|ref|ZP_04888460.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] gi|254207022|ref|ZP_04913373.1| tetratricopeptide repeat protein [Burkholderia mallei JHU] gi|254258660|ref|ZP_04949714.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] gi|254357501|ref|ZP_04973775.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280] gi|52208578|emb|CAH34514.1| putative membrane protein [Burkholderia pseudomallei K96243] gi|52427504|gb|AAU48097.1| TPR domain protein [Burkholderia mallei ATCC 23344] gi|76579814|gb|ABA49289.1| putative membrane protein [Burkholderia pseudomallei 1710b] gi|121228890|gb|ABM51408.1| TPR domain protein [Burkholderia mallei SAVP1] gi|124293373|gb|ABN02642.1| TPR domain protein [Burkholderia mallei NCTC 10229] gi|126219472|gb|ABN82978.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668] gi|126226465|gb|ABN90005.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a] gi|126241258|gb|ABO04351.1| TPR domain protein [Burkholderia mallei NCTC 10247] gi|134248647|gb|EBA48729.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305] gi|147752564|gb|EDK59630.1| tetratricopeptide repeat protein [Burkholderia mallei JHU] gi|148026565|gb|EDK84650.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280] gi|160695780|gb|EDP85750.1| TPR domain protein [Burkholderia mallei ATCC 10399] gi|184212401|gb|EDU09444.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655] gi|237504659|gb|ACQ96977.1| TPR domain protein [Burkholderia pseudomallei MSHR346] gi|238524787|gb|EEP88218.1| TPR domain protein [Burkholderia mallei GB8 horse 4] gi|242137863|gb|EES24265.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b] gi|243063113|gb|EES45299.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20] gi|254217349|gb|EET06733.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a] Length = 606 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 51 DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 110 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP + + VL + + A L Sbjct: 111 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 167 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 +Q+ A NR +AI+ + A + + Sbjct: 168 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 227 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L++ + + A++ L +A I V +P+ Sbjct: 228 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 283 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 284 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 343 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 A +K + ++ LAQI + +N W A Sbjct: 344 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 383 >gi|16330359|ref|NP_441087.1| hypothetical protein sll1628 [Synechocystis sp. PCC 6803] gi|1652849|dbj|BAA17767.1| sll1628 [Synechocystis sp. PCC 6803] Length = 384 Score = 39.9 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 4/67 (5%) Query: 134 RQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + A E + Q P E + L E+ A KAL + P P Sbjct: 314 GKLEEALANFDEALAQNPDDAEVWLSRGLLLEAMERK--EEAIPSYEKALTLEPTLPEAQ 371 Query: 192 EAVVQQY 198 E + + Sbjct: 372 ERLEELQ 378 >gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter racemifer DSM 44963] Length = 747 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 85/281 (30%), Gaps = 29/281 (10%) Query: 90 TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER--QYNIAHEKLEMML 147 GL A + + Q + LV L + R Q A + + + Sbjct: 381 RGLTQALNGQHREALQSFTRALQL----DPDLVTSLNGKGVALNRLRQNRDALQSFDRAI 436 Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWS 205 + A +G A AL P W ++++ + + + Sbjct: 437 LLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSLILRQMRK--YE 494 Query: 206 RAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC 265 A+ Q + N A+ ++ L + G + +Y E+LK A Sbjct: 495 EALQASEQALS----YEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYG 550 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---------ENTVGKLKRALR 316 L +Q K + A ++ + +P+ Y + N L+ R Sbjct: 551 MGNVLYAQQKFKSALDNYDRALQFDPN------YVKVWERRGQLLQELGNYRRSLESFER 604 Query: 317 LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +I+ + + + + M D A A++ P Sbjct: 605 ATQIDPSFAPAWLGKATVLSRMERYDMALNAYEEALRRNPS 645 Score = 38.0 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 50/158 (31%), Gaps = 4/158 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A++ + L+ + A+Y + SA +AL P+ V E Sbjct: 525 GRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWER 584 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 Q + R++ + + + A + ++ + + + E+L Sbjct: 585 RGQLLQELGNYRRSLESFERATQIDPSF----APAWLGKATVLSRMERYDMALNAYEEAL 640 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A +L A + KVNP Sbjct: 641 RRNPSLPAALNGKGNALYRLGNYSAALSAYDNALKVNP 678 >gi|256221612|ref|NP_001157768.1| plectin isoform 1c [Rattus norvegicus] Length = 4573 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1488 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1489 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1548 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1549 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1586 >gi|256390102|ref|YP_003111666.1| hypothetical protein Caci_0892 [Catenulispora acidiphila DSM 44928] gi|256356328|gb|ACU69825.1| Tetratricopeptide TPR_4 [Catenulispora acidiphila DSM 44928] Length = 667 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 49/157 (31%), Gaps = 40/157 (25%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 A + + A +Q A+ +R + ++ S + + + + +L Sbjct: 500 AGDLAGAREAWDQSMAQAETAWAHRNLAILDASEDRLGD-----AADRYLRAWQLSPRLR 554 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI 320 +I ++LI+ + +A I+ +LK Sbjct: 555 PLTIETLRALITAKRPGEALDII-------------------------DRLK-------- 581 Query: 321 NKESVESLVIVSK--IALEMGSIDQAHAKAMLAMKIA 355 + +++ + AL+ G + +A + + Sbjct: 582 EPDRFAGRILMLECRAALDAGDLVRARRILETGLIVE 618 >gi|209542487|ref|YP_002274716.1| tetratricopeptide repeat-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530164|gb|ACI50101.1| Tetratricopeptide TPR_2 repeat protein [Gluconacetobacter diazotrophicus PAl 5] Length = 646 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 29/204 (14%) Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE-SLKLCDNSI 260 W+ A L + LL+ + GD A+ + + + + + Sbjct: 127 GRWAEAEASLRAARALCP----GDMALLLEWARACIHGGDHAAATAEIVAGADRFAPDHA 182 Query: 261 MASICAAKSLISQNKKRKAEVILE----------KIWKVNPHPEIANIYTHLLSENTVGK 310 A A L + + AE + W + A ++ E+ Sbjct: 183 GALHGLATLLADRGQPAGAEALYRQIVRLLPDDGAAWANHG----AALFALNRHEDARVA 238 Query: 311 LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP-RKEIFLLLAQI-E 368 L+ A L E+ + + + +G + QA A +AP I + A I + Sbjct: 239 LEHAAALA---PGVAETQNNLGLVLMALGHLPQARTALERARILAPGDARIAVNAATILD 295 Query: 369 QANSHNTDKILYWTQSALHAMPDP 392 + + + LY A+ + DP Sbjct: 296 ELAEGDAAEALY---RAV--LRDP 314 >gi|15679580|ref|NP_276697.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622708|gb|AAB86058.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus str. Delta H] Length = 351 Score = 39.9 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 77/242 (31%), Gaps = 21/242 (8%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 I +++ + L+I + + L R+G + A +A+ I P Sbjct: 104 RADILFDSGKFSKSELCYTAALRIDPNDVYILNRLGDNLTRLGRFDEALENYRRAIMIEP 163 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + P++ + + A A+ + K + + LL R + G + + Sbjct: 164 ENPYIWNNMAITLLNAGRVDEALEASERALKIKHDPD-----LLYWRGVMLEVAGKPLEA 218 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEKIWKVNPHPEIANIYTH 301 SL++ + L + +A LE + P + N Sbjct: 219 LESYERSLEIDPRNAEVWTARGNLLSDLGRMEEAIESYNSALELALEDEQDPNVWN---- 274 Query: 302 LLSENTVGKLKRA-LRLEEIN------KESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 N + +L+R LE E+ + LE+ D+A A+ I Sbjct: 275 -RKGNALLELERFNEALECYRRAIEMEPENDVYWTNMGVALLELERFDEALEAFNRALMI 333 Query: 355 AP 356 P Sbjct: 334 NP 335 >gi|322823366|gb|EFZ29135.1| hypothetical protein TCSYLVIO_4628 [Trypanosoma cruzi] Length = 646 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 A VQ+ + + A+ L++ NR ++L +R+ N G + DA+ Sbjct: 221 QLAAVQKNLSEGAYEEALKLLDK--LPLNAVNRVDILVLRSRA--NIFLGRYEEALKDAL 276 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 E+++ + ++ AA++ K KA + + + PH Sbjct: 277 EAIEEEPRWVKGNLAAARAFSGLCKFEKAAQQIHRAMLLLPH 318 >gi|288920314|ref|ZP_06414626.1| hypothetical protein FrEUN1fDRAFT_4324 [Frankia sp. EUN1f] gi|288348262|gb|EFC82527.1| hypothetical protein FrEUN1fDRAFT_4324 [Frankia sp. EUN1f] Length = 144 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 2/116 (1%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y G+ + + A ++ ++ V + Q++ A Sbjct: 27 YDWYTRGMALLGHGDANAAVQLLAHAVA--AEPASPSVREALARAQFEAGQFDDAARTFA 84 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL 200 ++ T ++A + L + R GDL A + A+ + PD A+ Sbjct: 85 WIVDRHPTDDYAQFGLGMAARRAGDLRVAIEHLALAVAMRPDLAHYGVALRGARAA 140 >gi|196228940|ref|ZP_03127806.1| cytochrome C family protein [Chthoniobacter flavus Ellin428] gi|196227221|gb|EDY21725.1| cytochrome C family protein [Chthoniobacter flavus Ellin428] Length = 785 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 11/162 (6%) Query: 201 AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + A+ K A +W+ A L ++ + G + E+++L Sbjct: 617 RGDEKGALDEF----KLAVDWDHGSAPLRSNYAIALSLSGQSEEAVKQLAEAVRLAPREA 672 Query: 261 MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRAL 315 A +L N+ +A LE+ +++ P+ + + L+ Sbjct: 673 QLRYTYALALNEVNRAAEARTQLEQAVQLD--PQFGRAWYNLGLARNAAGQPDQALEALA 730 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 R E ++ ++ ++ + I L + +A A A+KI P Sbjct: 731 RAEALDPQNPQAPYAAATILLRLQRAHEAADAARRALKIEPS 772 >gi|149066131|gb|EDM16004.1| rCG59523, isoform CRA_b [Rattus norvegicus] Length = 4573 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1488 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1489 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1548 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1549 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1586 >gi|149066130|gb|EDM16003.1| rCG59523, isoform CRA_a [Rattus norvegicus] Length = 4585 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1441 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1500 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1501 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1560 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1561 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1598 >gi|157371846|ref|YP_001479835.1| type IV pilus biogenesis/stability protein PilW [Serratia proteamaculans 568] gi|157323610|gb|ABV42707.1| type IV pilus biogenesis/stability protein PilW [Serratia proteamaculans 568] Length = 263 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 64/200 (32%), Gaps = 19/200 (9%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL++ + + P + S Q L L + A + LE Sbjct: 24 LAAGLLAGCSGSTPEEKDAQSQAGQ---------TRLQLGLEYLKQGDLPAARQNLEKAA 74 Query: 148 ----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 Q T+ + R+G+ ++A++ +AL ++P+ V + Sbjct: 75 DAAPQDYRTQL----GMALYEQRMGENSAAEQRYQQALKLAPNNGTVLNNYGAFLCSLGQ 130 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + A + ++ G + ++K+ + Sbjct: 131 YVPAQQQFSAAAVAPDYGQVADSLENAGYC--FLKAGQNDEARTLLTRAMKIDPDKGTPL 188 Query: 264 ICAAKSLISQNKKRKAEVIL 283 + A+ + K+ +++++L Sbjct: 189 LVEAEKQFGEGKRAQSQLLL 208 >gi|39940178|ref|XP_359626.1| hypothetical protein MGG_05151 [Magnaporthe oryzae 70-15] gi|145010592|gb|EDJ95248.1| hypothetical protein MGG_05151 [Magnaporthe oryzae 70-15] Length = 837 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 70/231 (30%), Gaps = 39/231 (16%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 ++ ++ A + + L++ L ++ D + + L P Sbjct: 92 QKNFDEAIKAYKFALRLEPKSAQIQRDLAILQIQMRDYQGYVQTRMQMLTARPQLRQNWT 151 Query: 193 AVVQQYVLAKEWSRA---ITFLNQKKK---NAKEWNRNRAILLIARSLENADKGDMIASY 246 AV + LA + A +T Q K + ++ + AI+ ++ A+ GD + Sbjct: 152 AVAIAHHLAGNLAEAENILTTYEQSLKVPPSRADFEHSEAIM--YKNTIIAESGDTQRAL 209 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 E K + + AK L KK +A W+ Sbjct: 210 DHLEEISKSVLDRLAVMETRAKYLSELGKKEEATK----AWRA----------------- 248 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 L + N + + +++ + A K APR Sbjct: 249 ----------LLDRNPDHADYYYGLAEAMGISDDVAAKQAIFDEYAKKAPR 289 >gi|91785587|ref|YP_560793.1| TPR repeat-containing protein [Burkholderia xenovorans LB400] gi|91689541|gb|ABE32741.1| TPR repeat protein [Burkholderia xenovorans LB400] Length = 601 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 15/206 (7%) Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 A+ E+ + G L++A+ + +AL + + A + +++ Sbjct: 20 LTALIDAALEAHQAGRLDAAESFYREALTLDSAHTGALHYFGVLHYQRGAHDIAASLMSR 79 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 K +R+ A R L A G + + ++L+L + A +L +Q Sbjct: 80 ALK----LDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGAALQAQ 135 Query: 274 NKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLE------EINKESVE 326 +A NP + HL + KL R L ++ S E Sbjct: 136 GALPEAVEHYRLALASNP----MLLDAHLNLGTALNKLARFDEALACYRHVLSLDPASAE 191 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAM 352 + G A A A+ Sbjct: 192 AHFSAGNTYQARGDHGAAIASFEQAV 217 >gi|15676598|ref|NP_273742.1| IgA-specific serine endopeptidase [Neisseria meningitidis MC58] gi|7225928|gb|AAF41117.1| IgA-specific serine endopeptidase [Neisseria meningitidis MC58] gi|325139921|gb|EGC62451.1| IgA-specific serine endopeptidase [Neisseria meningitidis CU385] Length = 1815 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ Sbjct: 1156 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1200 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184 L +Q A + + + E+ R + ++ A KA ++S Sbjct: 1201 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1252 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 A A QQ LA++ A K E R A L + Sbjct: 1253 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1311 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A + + A+ +AK + R+A ++ + H + A Sbjct: 1312 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1363 Query: 303 LSENTVGKLKRALR 316 + + KR Sbjct: 1364 ---SQPQRRKRRAA 1374 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R ++K +A ++A A + ++ + E Q A R++ Sbjct: 1071 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1121 Query: 138 IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190 E E+ + R+ A + R + Q Y A P V Sbjct: 1122 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1176 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + V+ ++A L ++++ R A LL + E + +A+ A Sbjct: 1177 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1225 Query: 251 --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 E+ + AA+ Q +RKA + Sbjct: 1226 AEEAKRQ----------AAELAHRQEAERKAAEL 1249 >gi|87301812|ref|ZP_01084646.1| photosystem I assembly protein Ycf3 [Synechococcus sp. WH 5701] gi|87283380|gb|EAQ75335.1| photosystem I assembly protein Ycf3 [Synechococcus sp. WH 5701] Length = 173 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 19/125 (15%) Query: 79 RNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE---YLVYLLEVQIALAERQ 135 R + + G+ + + A + +Y + + + + Sbjct: 30 RRAKEAFAYYRDGMSA--QGDGEYAEALENYDEALKLEDDPLDRAFILYNMALVYTSNGD 87 Query: 136 YNIAHEKLEM-------MLQIPATREFAVYSLYFESCRIGDLNS-------AQRYATKAL 181 + A E E M Q + L + GD + A Y TKA+ Sbjct: 88 HQRAIETYEQVLELNSHMPQALNNMAVIHHHLGSLAEERGDTDESDRRFSQAAEYWTKAI 147 Query: 182 DISPD 186 ++P+ Sbjct: 148 RMAPN 152 >gi|254251383|ref|ZP_04944701.1| hypothetical protein BDAG_00568 [Burkholderia dolosa AUO158] gi|124893992|gb|EAY67872.1| hypothetical protein BDAG_00568 [Burkholderia dolosa AUO158] Length = 608 Score = 39.9 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 79/223 (35%), Gaps = 23/223 (10%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A + A +A++ V + + L KN + +R A Sbjct: 170 ARELARATGETRGPAILALQALL---VRGPDRVGGLAVLKDMLKN----DMSRPEAQFAI 222 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + D + +L++ + + A++ L + +A I V + Sbjct: 223 ARQQLAVDDKEGAAQSLKRALQIRPDYLPAALM----LSQMGPEERAAGIASFEKYVQQN 278 Query: 293 PE-----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 P+ +A +L + K+ + +++ + L+ ++ I ++ +D A A Sbjct: 279 PKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMALALIKIQQKKLDDASAY 338 Query: 348 AMLAMKIAPRK------EIFLLLAQIEQANSHNTDKILYWTQS 384 +++ ++ + ++ LAQI N + W Sbjct: 339 LKQYVQLGDKQPNLDVGQGYIYLAQI-AIEQGNDAQAAQWLDK 380 >gi|312797352|ref|YP_004030274.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica HKI 454] gi|312169127|emb|CBW76130.1| Tetratricopeptide repeat family protein [Burkholderia rhizoxinica HKI 454] Length = 593 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 19/177 (10%) Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 L + + + R I L+A+S + + + A + S A+ A Sbjct: 89 ALARDTMDPRFAQRATEIALLAQS--------PVDALNAAQLWQQYAPQSDRAAQIDASL 140 Query: 270 LISQNKKRKAEVILEKIWKVNPHPE------IANIYTHLLSENTVGKLKRALRLEEINKE 323 L+ K +A+ +LE+ P+ I N L L + + Sbjct: 141 LVLAGKPEEAKPLLEQQ-LAKVAPDNRANALIGLQMLLARGPNRTSGLHVLQNLLRHDMD 199 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILY 380 E+ +++ D A A+K P +LL D+ Sbjct: 200 KPEANYAIARQQALAQDRDGARQSLQTALKEKPDFLPAMLLLA----QLGPQDRAQA 252 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 76/261 (29%), Gaps = 46/261 (17%) Query: 132 AERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + A LE L P R A+ L R + S L D P Sbjct: 143 LAGKPEEAKPLLEQQLAKVAPDNRANALIGLQMLLARGPNRTSGLHVLQNLLRHDMDKPE 202 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+ +Q LA++ A L K ++ A+LL+A+ + A Sbjct: 203 ANYAIARQQALAQDRDGARQSLQTALKEKPDF--LPAMLLLAQ----------LGPQDRA 250 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG 309 + +L + +N + + + +A +Y L + Sbjct: 251 QATQRLS------------QYVRKNPQAREARM-----------SLAQLY--LAGDRLDD 285 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM---LAMKIAPRK---EIFLL 363 RL + L+ ++ I ++ A A + P + ++ Sbjct: 286 AKVEFARLANDGSHDLLPLMALALIEIQQRHWPSAKQYLQRYVAAAQSQPNADPGQAYIY 345 Query: 364 LAQIEQANSHNTDKILYWTQS 384 LAQI + W Sbjct: 346 LAQI-ALEQKDDQAASQWLDK 365 >gi|293401089|ref|ZP_06645234.1| hypothetical protein HMPREF0863_01374 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306115|gb|EFE47359.1| hypothetical protein HMPREF0863_01374 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 502 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 42/196 (21%) Query: 104 RKMHSYVSQQHTFHN--EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 K + + H + L +L + + A T +++L Sbjct: 207 WKEFQIANAYISLHRAKDALEHLKKAEAA-----------------GKDDTS---LHALM 246 Query: 162 FESCRIGD--------LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ R+ D + A Y KA+ + W+ + ++ ++W + + FL + Sbjct: 247 GDAYRLLDDMEHANAHYDRALSYYEKAIHREKEHYWIYQEMIWIAHKQRDWKKKLAFLKR 306 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI----CAAKS 269 +K K+ L+ + +D GD Y A + + C + + A + Sbjct: 307 AEKEKKD----DMWLMYHFARCYSDLGD----YEHAENACEFCLSHGEQGMDMFDLYAWN 358 Query: 270 LISQNKKRKAEVILEK 285 L K+RKA +L K Sbjct: 359 LGRDGKERKAIEVLAK 374 >gi|237716077|ref|ZP_04546558.1| tetratricopeptide repeat protein [Bacteroides sp. D1] gi|262407689|ref|ZP_06084237.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_1_22] gi|229443724|gb|EEO49515.1| tetratricopeptide repeat protein [Bacteroides sp. D1] gi|262354497|gb|EEZ03589.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_1_22] Length = 676 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189 + Y+ A E LE +L++ TR + + S + D +A KAL++ P W Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+V+ +++ A N+ + A I R+L + ++ + D Sbjct: 196 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249 Query: 250 IESLKLCDN 258 +L + N Sbjct: 250 DLALDIDPN 258 >gi|254515302|ref|ZP_05127363.1| TPR domain protein [gamma proteobacterium NOR5-3] gi|219677545|gb|EED33910.1| TPR domain protein [gamma proteobacterium NOR5-3] Length = 610 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 4/158 (2%) Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L + +L ++GD A I L A + AK ++ ++ Sbjct: 218 DVSLRLTHALMAEERGDAAAVRERLIPVFALEPYQQQALVLEAKLNLAAGDDEPLAR-IK 276 Query: 285 KIWKVNPHP-EIANIYTHLL-SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 + K +P ++ Y LL S++ K+ L + + L ++ I E+ Sbjct: 277 EALKKDPTRTDLRLQYARLLASQDMPAARKQFEILSAEAPHNADLLFSLALINHELKDNI 336 Query: 343 QAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDKIL 379 A A + + R E +L L QI + + + Sbjct: 337 AAKAYLNQVIALGKRNDEAYLFLGQIARTEGDLDEAVQ 374 >gi|300723720|ref|YP_003713027.1| putative outer membrane protein with transferase domain [Xenorhabdus nematophila ATCC 19061] gi|189313951|gb|ACD88980.1| HmsH [Xenorhabdus nematophila] gi|297630244|emb|CBJ90895.1| putative outer membrane protein with transferase domain [Xenorhabdus nematophila ATCC 19061] Length = 782 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 10/112 (8%) Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 AV + Y ++WS+AI + + + + + AD + H A Sbjct: 53 TAVARAYRNKRQWSQAIQLWRAALA----FEKQNSDIKAGLIMTLADAKQDNEARHLAKN 108 Query: 252 SLKLCDNSIMASICAAKSLISQ--NKKRKAEVILEKIWKVNPH-PEIANIYT 300 LK N A+ + + Q + A IL ++ PH PEI Y Sbjct: 109 LLKSQPN---AANYRLMAYVDQAAGRMWDAMQILSTAYERFPHNPEITQDYL 157 >gi|40849892|gb|AAR95658.1| plectin 4 [Rattus norvegicus] gi|40849894|gb|AAR95659.1| plectin 5 [Rattus norvegicus] gi|40849902|gb|AAR95663.1| plectin 9 [Rattus norvegicus] Length = 4451 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1307 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1366 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1367 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1426 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1427 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1464 >gi|332847545|ref|XP_003315474.1| PREDICTED: dnaJ homolog subfamily C member 7 isoform 1 [Pan troglodytes] Length = 494 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|319410073|emb|CBY90407.1| IgA-specific serine endopeptidase (IgA protease) [Neisseria meningitidis WUE 2594] Length = 1811 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ Sbjct: 1152 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1196 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184 L +Q A + + + E+ R + ++ A KA ++S Sbjct: 1197 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1248 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 A A QQ LA++ A K E R A L + Sbjct: 1249 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1307 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A + + A+ +AK + R+A ++ + H + A Sbjct: 1308 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1359 Query: 303 LSENTVGKLKRALR 316 + + KR Sbjct: 1360 ---SQPQRRKRRAA 1370 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R ++K +A ++A A + ++ + E Q A R++ Sbjct: 1067 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1117 Query: 138 IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190 E E+ + R+ A + R + Q Y A P V Sbjct: 1118 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1172 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + V+ ++A L ++++ R A LL + E + +A+ A Sbjct: 1173 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1221 Query: 251 --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 E+ + AA+ Q +RKA + Sbjct: 1222 AEEAKRQ----------AAELAHRQEAERKAAEL 1245 >gi|325109330|ref|YP_004270398.1| hypothetical protein Plabr_2777 [Planctomyces brasiliensis DSM 5305] gi|324969598|gb|ADY60376.1| hypothetical protein Plabr_2777 [Planctomyces brasiliensis DSM 5305] Length = 334 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 46/142 (32%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDL 170 + N ++L ++ A + ++ A+ L G Sbjct: 82 KTEKDLRNPMQLHLSYARLQEQLGHLTEARTSYQKVISREPKSAEAIIGLGRLDALAGRH 141 Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 A++ A+++S + A+ + + ++ AI L + +++ + + R L + Sbjct: 142 AEAEQRFRHAVEVSNGSADSLYALGEYMASQERYTEAIVELQKAVRSSPKNLQYRYQLGL 201 Query: 231 ARSLENADKGDMIASYHDAIES 252 + + E+ Sbjct: 202 TMARGGQYDTALSVLSEVVTEA 223 >gi|282163113|ref|YP_003355498.1| hypothetical protein MCP_0443 [Methanocella paludicola SANAE] gi|282155427|dbj|BAI60515.1| hypothetical protein [Methanocella paludicola SANAE] Length = 174 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 14/136 (10%) Query: 129 IALAERQYNIAHEKLEM-MLQIPATRE----FAVYSLYFESCRIGDLNSAQRYATKALDI 183 L + + A E+ + + P E + +Y ++ ++ D A R +A+ + Sbjct: 33 ALLLVGRIDEAIEEYRAALDKDPENAEVHYNLGL--IYRKTMQLDD---AIREYREAIRV 87 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P + V+ + S A+ + + A L R + G++ Sbjct: 88 DPGNMKYHNNLAAALVVKGQKSEAVKEYEEALRIEP----KNATLHFNRGFALDEMGELQ 143 Query: 244 ASYHDAIESLKLCDNS 259 + + E+L++ Sbjct: 144 EAKKEYEEALRIDPGF 159 >gi|271967075|ref|YP_003341271.1| ATPase-like protein [Streptosporangium roseum DSM 43021] gi|270510250|gb|ACZ88528.1| ATPase-like protein [Streptosporangium roseum DSM 43021] Length = 1103 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 49/177 (27%), Gaps = 14/177 (7%) Query: 127 VQIALAERQYNIAHEKLE---MMLQI----PATREFAVYSLYFESCRIGDLNSAQRYATK 179 +A Y A M P + L + D +A+ + + Sbjct: 853 ATLAEIAGDYGQAGRLYRDGLRMADDLGLWPEVSFT-LSGLGRMALLSKDYPAAREFHER 911 Query: 180 ALDISPDAPWVTEAVVQ--QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 A ++ + L + ++ + +R + +L A Sbjct: 912 ARRLAVEQSDTFGEQFAEIGLGLGARRDGDLDTAEAHLRSVLDLHRRMSHEPCVPALILA 971 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 + G + DA +L L + + A++ A L + HP+ Sbjct: 972 ELGFIAEHRGDARAALDLQLD----GLATARTTGDPRAVALALEGLAGAQTLAGHPD 1024 >gi|258404983|ref|YP_003197725.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfohalobium retbaense DSM 5692] gi|257797210|gb|ACV68147.1| Tetratricopeptide TPR_2 repeat protein [Desulfohalobium retbaense DSM 5692] Length = 563 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 81/238 (34%), Gaps = 13/238 (5%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L+ Q LAE A + L L+ + L R + A+ +A + Sbjct: 44 LFLKAQALLAEGNAPAAAQALSRALEEDPQPTLYLE-LAETYWRNEERQKAKTILKEATE 102 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 PD + Q Y+ + A L ++ + RA L + D Sbjct: 103 RFPDQFAFVANLAQIYMAGQRPKAAAATLRSYIQDHPDNWTARAKL-GEIQVRIQAFADA 161 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + E + ++ ++ +KA L+ V+ P++A + L Sbjct: 162 VDTLQTIPEPEREPEHLF----FLGQAQAGLGLLQKASDNLQSA--VDKAPQMAKAWAEL 215 Query: 303 -----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 ++ + RL E+ ++ E L+ + ++ LE+ + D+A A Sbjct: 216 GYIRERQKDYPAAITAYTRLSELQPDNQEVLIRLIELHLELNNPDKAQTLAESGPGTE 273 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 75/273 (27%), Gaps = 43/273 (15%) Query: 70 AMLFHMLHKRNYDKGYKALYT---------------GLMSIAAHNIPLARKMHSYVSQQH 114 L+ +RN + +AL G M + A ++ Sbjct: 313 EALYWYQKERNPARAIEALRQIPASAPFYNQSLHFLGQMHLERDQPEQAVQVARKGKA-- 370 Query: 115 TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRIGDLNS 172 TF + +LL + + A E + L+ T L E+ D + Sbjct: 371 TFPDIPDFWLLHSNALRRQDKPQKALEVINDALEKWPEDTDLLYQKGLLAEALDQSD--T 428 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---KNAKEWNRNRAILL 229 A + + + P+ V L++ KNA E +L Sbjct: 429 AMASMEQIISLDPEHADALNFVGYSLAEQGR------ELDRALVLIKNAVELRPENGYIL 482 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + + KG+ ++ E+++L K ++A K Sbjct: 483 DSLAWVYYQKGNYAKAWDIIQEAVQLSTEDPTIWEHYGDIAAKLQKTKEARRGYRKA--- 539 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINK 322 L +E+ K+ L E Sbjct: 540 ----------IELGAEDQTSIDKKLQTLPEPAP 562 >gi|182413247|ref|YP_001818313.1| TPR repeat-containing protein [Opitutus terrae PB90-1] gi|177840461|gb|ACB74713.1| Tetratricopeptide TPR_2 repeat protein [Opitutus terrae PB90-1] Length = 413 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 4/116 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ +A A +AL I + V + A ++ ++A Sbjct: 114 LARGNAPAALTAAEQALAIDSEHVEAANLRAMALVRLGRKAEATETVDFALQHAPNS--- 170 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 A+ + + D + E+L+L A ++L ++N +A Sbjct: 171 -ALSHANQGWTYLHRNDPRRAQEFFREALRLDPTMEFARQGMLEALKARNPVYRAM 225 >gi|115377780|ref|ZP_01464970.1| TPR domain protein, putative [Stigmatella aurantiaca DW4/3-1] gi|310817745|ref|YP_003950103.1| tetratricopeptide repeat-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115365217|gb|EAU64262.1| TPR domain protein, putative [Stigmatella aurantiaca DW4/3-1] gi|309390817|gb|ADO68276.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1] Length = 304 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 55/159 (34%), Gaps = 6/159 (3%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + E +G + E+ + ++ + A+ + R + LE+ ++ P Sbjct: 62 EAAELLLEGAPAEARELVDEADRREPGAVETQLLRARICQVERMDRCVQETLERAARMAP 121 Query: 292 ---HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 P++ S N L+ + + + + +++ D+A A Sbjct: 122 DDARPDLLRAELSERSGNLPAALEAIAQAQSKQPQDTAVSLRYARLLSVTARHDEAEAIL 181 Query: 349 -MLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL 386 L +++P +LL + + + + + A+ Sbjct: 182 RGLEPRLSP--RDWLLQMGMLRTRAGQDREARAFFARAV 218 >gi|115388427|ref|XP_001211719.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114195803|gb|EAU37503.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1573 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 12/132 (9%) Query: 177 ATKALDISPDA------PWVTEAVVQQYVLAK--EWSRAITFLNQKKKNAKEWNRNRAIL 228 ATKAL++ W+ ++ + ++ +A+ + ++ A++ AI Sbjct: 513 ATKALEMLSHLCMESNWEWIDGLLLGGCLAYGLGDYQKAMRWYSR--IIARDATHVEAIS 570 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 +A +L D+ + H + ++KL + A L S ++ ++A I+E + Sbjct: 571 NLAATLLALDR--REEALHHWLRAVKLRPSFFEAVEHLIGLLCSSHRGKEAVNIIEFVQT 628 Query: 289 VNPHPEIANIYT 300 HP+ + + Sbjct: 629 SLRHPKNGDCFA 640 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 33/112 (29%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 Y A ++ AT A+ +L + A + +A+ + P E Sbjct: 546 GDYQKAMRWYSRIIARDATHVEAISNLAATLLALDRREEALHHWLRAVKLRPSFFEAVEH 605 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++ + A+ + + + + + E + +S Sbjct: 606 LIGLLCSSHRGKEAVNIIEFVQTSLRHPKNGDCFASDEHASEPESDAESRSS 657 >gi|78357018|ref|YP_388467.1| hypothetical protein Dde_1975 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219423|gb|ABB38772.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 379 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 2/190 (1%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +A ++A+ PD+ + A+ Y + RA+ + +R +A + Sbjct: 39 DRRAAISALSRAVRNDPDSVEIYLALGNLYRAQGDIERAVQLRSTLIARPSLEDRLKARV 98 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 + G + + ++ +L S + A+ +A + ++ Sbjct: 99 YFELGHDYKRGGFIDRALQAFEQARRLSGESDEITRDTARLHAESGNFLQAATLFGRLGM 158 Query: 289 VNP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 P H + + + S K + + N+ S+E+ + +A Sbjct: 159 RIPQAHYLVRHAQEVMQSHGEAEARKFLSKALKANQSSIEARQELIGLAARNEDWRATRK 218 Query: 347 KAMLAMKIAP 356 + A+K P Sbjct: 219 RLDEALKTVP 228 Score = 37.2 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 10/158 (6%) Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH---PEI 295 + D A+ +++ +S+ + +Q +A L P Sbjct: 37 ERDRRAAISALSRAVRNDPDSVEIYLALGNLYRAQGDIERAVQ-LRSTLIARPSLEDRLK 95 Query: 296 ANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 A +Y L L+ + ++ ES E +++ E G+ QA Sbjct: 96 ARVYFELGHDYKRGGFIDRALQAFEQARRLSGESDEITRDTARLHAESGNFLQAATLFGR 155 Query: 351 AMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHA 388 P+ +L+ E SH + + AL A Sbjct: 156 LGMRIPQAH-YLVRHAQEVMQSHGEAEARKFLSKALKA 192 >gi|18312740|ref|NP_559407.1| aminopeptidase [Pyrobaculum aerophilum str. IM2] gi|18160220|gb|AAL63589.1| aminopeptidase [Pyrobaculum aerophilum str. IM2] Length = 822 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 50/125 (40%), Gaps = 7/125 (5%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +++E K + + +++ D + AA++L +A L + +K + Sbjct: 553 QAIEVLKKNGSPRAVNALAKAVG--DKFWGVAAEAARALGEIG-TEEAMAKLTEAFKKSL 609 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG--SIDQAHAKAM 349 HP + + L + + L++I ++ ES + ++ A +G + A Sbjct: 610 HPRVRRVIVEALGNT--KRKEAGEFLDKILHDAGESYYVRAEAARALGKVKWEFAEFSLK 667 Query: 350 LAMKI 354 A++ Sbjct: 668 KALEY 672 >gi|116751454|ref|YP_848141.1| TPR repeat-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700518|gb|ABK19706.1| Tetratricopeptide TPR_2 repeat protein [Syntrophobacter fumaroxidans MPOB] Length = 226 Score = 39.9 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 7/121 (5%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 LY R GD A KA+++ P+ P V + ++ RAI + + Sbjct: 84 GLY---LRKGDHAQALAENLKAVELDPNLPMAHNNVAFARLQEGDYERAIESSRRAVELM 140 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + L ++ GD+ +S +++ LK+ + A A + + + Sbjct: 141 PGLIQAHNTL----AVALIQAGDLDSSIAVSLDMLKMNERFGPAHYNLAVAYKVKGDLER 196 Query: 279 A 279 A Sbjct: 197 A 197 >gi|331085214|ref|ZP_08334300.1| hypothetical protein HMPREF0987_00603 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407997|gb|EGG87487.1| hypothetical protein HMPREF0987_00603 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 837 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 52/173 (30%), Gaps = 20/173 (11%) Query: 103 ARKMHSYVSQQHTFHN-EYLVYLLEVQIAL-AERQYNIAHEKLEMM-------LQIPATR 153 AR+ + + + E+ L+ AL A QY A E L R Sbjct: 71 AREALEQIRKLGMSESAEHGTTLVNAATALRAAGQYEAALEAYREAEQIYSICLPSEDAR 130 Query: 154 EFAVYSLYFES-CRIGDLNSAQRYATKALDISPDAPWVTEA-------VVQQYVLAKEWS 205 +Y+ + R A KAL + E + + Y+ + S Sbjct: 131 FAGLYNNMSLAYERQNAHEEALSCLQKALSVILQTADAKEETAATYTNLAELYLKTGQIS 190 Query: 206 RAITFLNQKK---KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 + L + + + + A L A G + ++L++ Sbjct: 191 EGLNCLEKALVLYEAGNTQDPHYAAALSACGHGYYLAGRYEEAIDSYTKALRM 243 >gi|315919125|ref|ZP_07915365.1| tetratricopeptide repeat family protein [Bacteroides sp. D2] gi|313693000|gb|EFS29835.1| tetratricopeptide repeat family protein [Bacteroides sp. D2] Length = 676 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 12/129 (9%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189 + YN A E LE +L++ TR + + S + D +A KAL++ P W Sbjct: 138 KDYNAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+V+ +++ A N+ + A I R+L + ++ + D Sbjct: 196 AARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249 Query: 250 IESLKLCDN 258 +L + N Sbjct: 250 DLALDIDPN 258 >gi|297260399|ref|XP_002808010.1| PREDICTED: LOW QUALITY PROTEIN: crooked neck-like protein 1-like [Macaca mulatta] Length = 848 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%) Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK------KNAKEWNRNRAILLIA 231 + + +P ++ E + + + W R + + Sbjct: 481 EEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINY 540 Query: 232 RSLENADKGDMIASYHDAIESLKLCD----NSIMASICAAKSLISQNKKRKAEVILEKIW 287 E + D + SL+L I A+ I Q A L Sbjct: 541 ALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSI 600 Query: 288 KVNPHPEIANIYTHLL---SENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQA 344 P ++ +Y L E + K + E E+ S + +++ +G ID+A Sbjct: 601 GKCPKNKLFKVYIELELQLREFDRCR-KLYEKFLEFGPENCTSWIKFAELETILGDIDRA 659 Query: 345 HAKAMLAM 352 A LA+ Sbjct: 660 RAIYELAI 667 >gi|224537517|ref|ZP_03678056.1| hypothetical protein BACCELL_02396 [Bacteroides cellulosilyticus DSM 14838] gi|224520830|gb|EEF89935.1| hypothetical protein BACCELL_02396 [Bacteroides cellulosilyticus DSM 14838] Length = 540 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 13/109 (11%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A + A + I E + +L + GD +A+ Y +KA A Sbjct: 374 AYQSGNLDKAESYFKKAASIKDAPEVNM-NLGLIALTKGDKAAAETYLSKAS----GAKE 428 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQ--------KKKNAKEWNRNRAILLI 230 + EA+ Y+ ++ RA++ + AK++N+ + L Sbjct: 429 LNEALGNLYIAQGQYDRAVSAFGNTKSNSAALAQILAKDYNKAKNTLAS 477 >gi|209520241|ref|ZP_03269010.1| TPR repeat-containing protein [Burkholderia sp. H160] gi|209499316|gb|EDZ99402.1| TPR repeat-containing protein [Burkholderia sp. H160] Length = 579 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 5/160 (3%) Query: 121 LVYLL-EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +LL + A E +L++ A+ L + + G L K Sbjct: 11 LDHLLRQAVALQQHGALVEAEELYREILELKPKHVDALRWLGELALQTGRLQEGAELLKK 70 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 L ++P P V + + A+ + ++ A+ +L ++ Sbjct: 71 TLALNPKQPAVHSNLAYALNALQRHDEALACAERALAMQPKF--ADALNNRGNALAALNR 128 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + +L L A A L + A Sbjct: 129 LP--DALASYERALSLAPEFAAAWNNRACVLRDLGRHADA 166 >gi|167737036|ref|ZP_02409810.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 14] gi|167822669|ref|ZP_02454140.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 9] gi|167917494|ref|ZP_02504585.1| tetratricopeptide repeat protein [Burkholderia pseudomallei BCC215] Length = 602 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 47 DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 106 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP + + VL + + A L Sbjct: 107 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 163 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 +Q+ A NR +AI+ + A + + Sbjct: 164 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 223 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L++ + + A++ L +A I V +P+ Sbjct: 224 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 279 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 280 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 339 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 A +K + ++ LAQI + +N W A Sbjct: 340 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 379 >gi|26349761|dbj|BAC38520.1| unnamed protein product [Mus musculus] Length = 621 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 339 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 394 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 395 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 447 >gi|116623140|ref|YP_825296.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116226302|gb|ABJ85011.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] Length = 311 Score = 39.9 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 54/171 (31%), Gaps = 16/171 (9%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW--- 221 D+ SA++ A++++P + + ++ A + K Sbjct: 137 LEKRDVESAEKRLEHAVELAPQFENAWNTLGTIAYQTRRFTLAEQRFREALKQDPTAYEP 196 Query: 222 -NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 +L+ L+ A + ++ A+ ++L A + + A Sbjct: 197 LVNLGGVLVTLHKLDEALEVNVHAALTRPGDAL--------AESQLGMTYFELGQFDNAV 248 Query: 281 VILEKIWKVNP----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 LE+ K++P HP++ HL + + ++ Sbjct: 249 KHLERARKLDPAHFSHPQLYLAEIHLRRGEKAAAADVLEDFLLHHPDYPQA 299 >gi|324509190|gb|ADY43867.1| Anaphase-promoting complex subunit 7 [Ascaris suum] Length = 526 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 4/116 (3%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAI-TFLNQKKKNAKEWNRNRAILL 229 + A ++ AL +P+ + E +VQ Y++ + A N + + K+ R + Sbjct: 335 DDAIQHVRDALVFTPNDFDLYETLVQAYLMQNKLQEARLAACNCRHQLGKDNARALYLCA 394 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + D + + +++ L + + A A+ + KA +L+K Sbjct: 395 TVSAK---DDSTIKDAQKLLEKAISLSPHLLDAVFLLAELYDRTHNYEKAITLLKK 447 >gi|325106907|ref|YP_004267975.1| RNA polymerase subunit alpha domain protein [Planctomyces brasiliensis DSM 5305] gi|324967175|gb|ADY57953.1| RNA polymerase alpha subunit domain protein [Planctomyces brasiliensis DSM 5305] Length = 436 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 33/98 (33%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL+ + + A L + + ATR Y + GD A Y +A+D+ Sbjct: 121 LLKAGCIRLAGRVDEAENMLRGLAREAATRAEYSYQMGCIMADRGDTYGALEYFERAVDM 180 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 +P+ ++ Q +I Q + Sbjct: 181 NPNHSRALFSLAQLNNQLGNDDESIRLYEQMLAKPPVY 218 >gi|197120102|ref|YP_002140529.1| TPR domain-containing protein [Geobacter bemidjiensis Bem] gi|197089462|gb|ACH40733.1| TPR domain protein [Geobacter bemidjiensis Bem] Length = 1106 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 17/199 (8%) Query: 167 IGDLNSAQRYATKALDISPDAPWV---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 GDL+ A +AL + P + + + A+ L + + + EW+R Sbjct: 20 AGDLSGASECYRRALQLDPGYAEACFNLGCTLDRLSGP---AEALPHLARAVELSPEWSR 76 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 R L A + G M + + +++L S +L + ++ +A+ Sbjct: 77 ARGSLGFALARL----GRMGEAASELAAAVRLDPGDPGLSNNLGLALSALSRGEEAKDAF 132 Query: 284 EKIWK-----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM 338 E+ + PH ++ ++ + + AL + E E+ + ++ Sbjct: 133 EEAIRLDPLYAEPHNNLSILFERF--GESAHAIAAALEALRLKPEFPEAHLNLANALKSQ 190 Query: 339 GSIDQAHAKAMLAMKIAPR 357 G +A A A+++ P Sbjct: 191 GRHQEAIAHYREALRLRPD 209 >gi|148655010|ref|YP_001275215.1| hypothetical protein RoseRS_0852 [Roseiflexus sp. RS-1] gi|148567120|gb|ABQ89265.1| hypothetical protein RoseRS_0852 [Roseiflexus sp. RS-1] Length = 699 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 53/186 (28%), Gaps = 34/186 (18%) Query: 7 YFFVISLVICSFIIVSHYPEDV-SITWGNRLYRTSPFVILSILYFFLFAWILLFAVSRFF 65 Y ++ L I F + V ++ W + I +L + Sbjct: 353 YVALMLLAIGGFCFMPQPARAVPTLLWVGLATLLAALTIGHPRLRLPVVAAVLPFAAYAL 412 Query: 66 LSCPAMLFHMLHKRNYDKGYKALYTGLM-------------------------SIAAHNI 100 + PA+ + Y AL ++ ++AA ++ Sbjct: 413 VRLPALWRQPDRLLRDRRSYAALIGAMIFLAFMFSTRYISWIESLRYTVPGRAALAAGDV 472 Query: 101 PLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL 160 A ++ + + L + + LA+ A E + + SL Sbjct: 473 HRAGRL--LTRAREVAPDNPLRVIDLADLYLAQGDNERALELYRLAASME------HRSL 524 Query: 161 YFESCR 166 Y ++ R Sbjct: 525 YAQAMR 530 >gi|15228104|ref|NP_181260.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] gi|75216851|sp|Q9ZUU3|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230 gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana] gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana] gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana] gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 757 Score = 39.9 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 66/203 (32%), Gaps = 25/203 (12%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLV--YLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 A + A+ + + +H + + LL Q A E L+ M + E Sbjct: 373 AGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS--KAGDMAAATEVLKAMATLNVPAE 430 Query: 155 FAVYSLYFESC-RIGDLNSAQRYA------------TKALDISPDAPWVTEAVVQQYVLA 201 Y + E+ + N A + L++ P +++ Sbjct: 431 AGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS---AYNPIIEYLCNN 487 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH-DAIESLKLCDNSI 260 + ++A Q K A+ + R +A +G+ +SY I S + Sbjct: 488 GQTAKAEVLFRQLMKRG--VQDQDALNNLIR--GHAKEGNPDSSYEILKIMSRRGVPRES 543 Query: 261 MASICAAKSLISQNKKRKAEVIL 283 A KS +S+ + A+ L Sbjct: 544 NAYELLIKSYMSKGEPGDAKTAL 566 >gi|328787832|ref|XP_392318.4| PREDICTED: transmembrane and TPR repeat-containing protein CG4341-like [Apis mellifera] Length = 843 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 17/182 (9%) Query: 121 LVYLLEVQIALAERQYNIAHEKL-EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L +L Q + A E + + P + Y+L + A + Sbjct: 514 LGSVLSAQ-----GRVAEAEEAFVQALRYRPNMADV-HYNLGILQQGRRNYEEAILSYQR 567 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK-------KKNAKEWNRNRAILLIAR 232 A+ P + + A L K+ + R L+ Sbjct: 568 AIHFRPSLAQAYVNLGAALASVGRGTEAAAVLRAGASLDGSGLKDKRAHEAARVQALLQL 627 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASI---CAAKSLISQNKKRKAEVILEKIWKV 289 AD+G + + E+L + ++L + +AE + Sbjct: 628 GALYADQGRLQRALSAYREALHALPDHYPPQSVYNLLGETLSRLQQYAEAERWFQASLAS 687 Query: 290 NP 291 P Sbjct: 688 QP 689 >gi|327192819|gb|EGE59746.1| hypothetical protein RHECNPAF_1910016 [Rhizobium etli CNPAF512] Length = 611 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 58/253 (22%) Query: 80 NYDKGYKALYTGLMS-------IAAHNIPLARKMHSYVSQQHTFHNEYLVYL----LEVQ 128 + L + ++ +A N A K + + +F + + L + Sbjct: 2 RQRLAIRLLTSAALAAVLSLGGVAGVNAEDAAKTAADAGKTDSFDADSVTTFSGAFLAAR 61 Query: 129 IALAERQYNIAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A + Y+ A E + LQ P R L GD+ +YA L Sbjct: 62 TADVDHDYDTAIELYKKALQIEPGNPEIR----QRLMISLLLNGDIKEGVKYAND-LKGD 116 Query: 185 PDAPWVTEAVVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIAR--------SLE 235 P +T V + + ++ A + L K N + N +L AR +L Sbjct: 117 PSVERITTIVRGMDAVRRDDYKTAESILKYKGPNDLDRMMNDLLLAWARVGAGRGKEALA 176 Query: 236 NADK----------------------GDMIASYHDAIESL------KLCDNSIMASICA- 266 +K GD+ ++ +++ ++ M ++ A Sbjct: 177 MVEKMKGPDWVRIFQNYNAGAIAVVTGDVKSARQHLNDAVLDKEGGATAPDTFMRAVMAL 236 Query: 267 AKSLISQNKKRKA 279 A+ SQ K+KA Sbjct: 237 ARLEASQGNKQKA 249 >gi|296202908|ref|XP_002748676.1| PREDICTED: dnaJ homolog subfamily C member 7 [Callithrix jacchus] Length = 494 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|302502963|ref|XP_003013442.1| hypothetical protein ARB_00260 [Arthroderma benhamiae CBS 112371] gi|291177006|gb|EFE32802.1| hypothetical protein ARB_00260 [Arthroderma benhamiae CBS 112371] Length = 578 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%) Query: 94 SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +IA LA K+ + + E L A + L T Sbjct: 315 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 E R A+ A K + P+ + + +W A+ Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K A + +R R+ + D E++K I A + A++L + Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470 Query: 273 QNKKRKAEVILEKI 286 + K + + Sbjct: 471 MKEYNKCLDVCTEA 484 >gi|289613844|emb|CBI59327.1| unnamed protein product [Sordaria macrospora] Length = 518 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 54/180 (30%) Query: 112 QQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLN 171 + L Q L++ + N A + + + + +G + Sbjct: 22 AEIASDLPVSNLLASAQSHLSKGETNDALVYYDAAIARDPSNYLTFFKRATTYLSLGRTS 81 Query: 172 SAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIA 231 A K L + P + + + +W A + +K + A + A Sbjct: 82 QATDDFNKVLALKPGFEGAHIQLGKLKARSADWDAAREHYEKARKADELAALEDAAVAAA 141 Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + A D A ++ + + ++ + L + L+ I ++ P Sbjct: 142 LAEKAAATRDWEECVTQAGAAIMVANRAVALRELRSNCLFERGDLEMGMSDLQHILQMKP 201 >gi|228987647|ref|ZP_04147761.1| TPR domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772107|gb|EEM20559.1| TPR domain protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 219 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 62/205 (30%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A ++A E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIKEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ +N L + EI + Sbjct: 181 YVFEDNNEKALALFKKATEIQPDHF 205 >gi|149917382|ref|ZP_01905880.1| tetratricopeptide repeata protein [Plesiocystis pacifica SIR-1] gi|149821719|gb|EDM81115.1| tetratricopeptide repeata protein [Plesiocystis pacifica SIR-1] Length = 239 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 58/197 (29%), Gaps = 25/197 (12%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G A + +A++++P + Y + A + ++ + + Sbjct: 50 QQTGRAEEAAAHFRRAVELNPAYTEAALNLSVCYSELGRYDEARSIYSEAASRQPKQPKQ 109 Query: 225 R-----------AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 + A L A G + + +L+L A L Sbjct: 110 KGELDAFVRGKLANLHFELGQAYASAGLLEPAVKQMRAALELSPTFADVRTKLAVYLRDL 169 Query: 274 NKKRKAEVILEKIWKVNPH--PEIAN----IYTHLLSENTVGKLKRALRLEEINKESVES 327 + KA L + P+ P + ++ E +RA LE ++ Sbjct: 170 GRFDKALEELRTVLGTRPNYVPAYVHLGVTLWRQGRREEAKIPWQRAQSLE---PDNR-- 224 Query: 328 LVIVSKIALEMGSIDQA 344 + + L M + A Sbjct: 225 ---IVQAYLRMADTNAA 238 >gi|149178264|ref|ZP_01856857.1| TPR repeat protein [Planctomyces maris DSM 8797] gi|148842913|gb|EDL57283.1| TPR repeat protein [Planctomyces maris DSM 8797] Length = 292 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 48/130 (36%), Gaps = 2/130 (1%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A + Q+ A + +MLQ A++ + + ++G +A +Y +A+ + P Sbjct: 1 MARQAEEKGQFVKAEQTYRVMLQRNPGNSVALHRMGIVNSKLGRHETATKYLMEAVKVQP 60 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENADKGDMI 243 + P + L + A L + K R+ L++ + + Sbjct: 61 ENPKYLTDLGYALYLQNDLPAAEIALEESIKRDPSTKRSFNNLSLVLGHQGRMDEAYQVA 120 Query: 244 ASYHDAIESL 253 + A E+ Sbjct: 121 RTVMSAEEAH 130 >gi|254245682|ref|ZP_04939003.1| TPR repeat [Burkholderia cenocepacia PC184] gi|124870458|gb|EAY62174.1| TPR repeat [Burkholderia cenocepacia PC184] Length = 706 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 47/182 (25%), Gaps = 22/182 (12%) Query: 221 WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + A +A + +GD A + + I + + Sbjct: 5 ARKLDAKSALADARGAHARGDRAAFAATLAHAQASAPDDPDMLAAIGAQWIDAGEPERGL 64 Query: 281 VILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEI----NKESVESLVIVSKI-- 334 L W HP A+ L + +G+ R L ++ + +++ Sbjct: 65 APLRD-WIAA-HPREADADVRLRYGDLLGRAGRDDALAAWLDTLRRDPALTPAQTARLED 122 Query: 335 ------------ALEMGSIDQAHAKAMLA-MKIAPRKEIFLLLAQIEQANSHNTDKILYW 381 A+ QA A K L LA +E+A H Sbjct: 123 QSLRLVLRQTDDAIARQDYAQARTLLDRASPAGRADKRYALELADLERAQGHYDA-AREA 181 Query: 382 TQ 383 Sbjct: 182 LA 183 >gi|117645842|emb|CAL38388.1| hypothetical protein [synthetic construct] gi|306921605|dbj|BAJ17882.1| DnaJ (Hsp40) homolog, subfamily C, member 7 [synthetic construct] Length = 494 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|326432559|gb|EGD78129.1| TPR repeat-containing protein [Salpingoeca sp. ATCC 50818] Length = 931 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 75/265 (28%), Gaps = 51/265 (19%) Query: 129 IALAERQYNIAHEKLEMML---------QIPATREFAVYSLYFESCRI-GDLNSAQRYAT 178 + +Y+ A +E L + P+T Y + GD + A + Sbjct: 363 AYADKGEYDRAIAYVEKALAITVETVGEKHPSTAST--YGNLGNAYDSKGDHDKAVHFYE 420 Query: 179 KALDIS--------PDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---------KNAKEW 221 KAL I P + Y ++ +AI + K+ Sbjct: 421 KALAIKVETLGEKHPSTADTYNNLGGAYDSKGDYKKAIQLYEKALAIQVETLGEKHPSTA 480 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS---LISQNKKRK 278 + + S D+ AI + L + + ++ K Sbjct: 481 STYNNLGNAYASKGEYDRAVQQYEKALAIYAEALGEKHPSTASTYGNLGVAYQNKGHYDK 540 Query: 279 AEVILEKIWKV------NPHPEIANIYTHL--------LSENTVGKLKR-----ALRLEE 319 A + EK + HP A Y +L + + ++ L E Sbjct: 541 AIELYEKALAIRVEALGEKHPSTATSYGNLGVAYQNKGEYDKAIEFYEKDLAITVETLGE 600 Query: 320 INKESVESLVIVSKIALEMGSIDQA 344 + + ++ + + G D+A Sbjct: 601 RHPSTADTYNNLGEAYRHKGKYDKA 625 >gi|298705615|emb|CBJ28866.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1192 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 17/154 (11%) Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 K+ ILL RS+ + G++ ++ DA +L L + I A A + + Sbjct: 457 KDKVAAREMLLILLCNRSVAHLKWGNLGSAKADAQRALDLDPHHIKAYFRRAAAHKQAER 516 Query: 276 KRKAEVILEKIWKVNPHP--------EIANIYTHLLSENTVGKLKRA-LRLEEINKESVE 326 R+A L I ++ P P +I ++ + K L+E KE Sbjct: 517 FREALADLRYILRLEPPPRKGVAVSKDILDVQRMAKECEQKVRAKGFGKALQETGKE--- 573 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEI 360 +K A + +A K RK + Sbjct: 574 -----AKGAKSASELKEAREKWDALRSKDDRKRV 602 >gi|260891961|ref|YP_003238058.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4] gi|260864102|gb|ACX51208.1| Tetratricopeptide repeat protein [Ammonifex degensii KC4] Length = 192 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 49/124 (39%), Gaps = 10/124 (8%) Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 N+ L+ + ++G + + E LKL ++ A + A Sbjct: 62 REEFNRAVAQKDLAK------LLELGAKAREEGKLAEATRTYEEVLKLYPDNTNARLSLA 115 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL----SENTVGKLKRALRLEEINKE 323 + +++ K A +E I + NP+ ++A Y L+ ++ +K + ++ + Sbjct: 116 EIYLAEEKYDAAYQQVEAILQKNPNHQLALFYRGLILGYGKKDYPAAVKDLEKFLKLAPD 175 Query: 324 SVES 327 + E+ Sbjct: 176 APEA 179 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV- 157 LA +Y + + L +I LAE +Y+ A++++E +LQ + A+ Sbjct: 87 EGKLAEATRTYEEVLKLYPDNTNARLSLAEIYLAEEKYDAAYQQVEAILQKNPNHQLALF 146 Query: 158 -YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L D +A + K L ++PDAP ++A +L +EWS+ Sbjct: 147 YRGL-ILGYGKKDYPAAVKDLEKFLKLAPDAPEASQA----RILIEEWSK 191 >gi|228941563|ref|ZP_04104112.1| TPR domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974493|ref|ZP_04135060.1| TPR domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981087|ref|ZP_04141388.1| TPR domain protein [Bacillus thuringiensis Bt407] gi|228778628|gb|EEM26894.1| TPR domain protein [Bacillus thuringiensis Bt407] gi|228785210|gb|EEM33222.1| TPR domain protein [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818119|gb|EEM64195.1| TPR domain protein [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942177|gb|AEA18073.1| TPR repeat-containing protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 219 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFTEAKVVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKATEIQPDHF 205 >gi|109115449|ref|XP_001108703.1| PREDICTED: dnaJ homolog subfamily C member 7-like isoform 6 [Macaca mulatta] gi|90084357|dbj|BAE91020.1| unnamed protein product [Macaca fascicularis] Length = 494 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|78065998|ref|YP_368767.1| cellulose synthase operon C-like protein [Burkholderia sp. 383] gi|77966743|gb|ABB08123.1| Cellulose synthase operon C-like protein [Burkholderia sp. 383] Length = 1259 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 72/292 (24%), Gaps = 40/292 (13%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPA----TREFAVY-----SLYFESCRIGDLNSAQRY 176 + + + + A ++ E ++ TR L + D AQ Sbjct: 459 QARALADKGERGPAAQRYEAAVRAAPDAAWTRFALARLYRDMGLPQLGRTVMDDGLAQSA 518 Query: 177 ATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 + + + V A ++ + A +A + Sbjct: 519 TPEMRYATALYRNSLDDVAGAQAALAPVDDA----HRSDGMRALARKLDAESALADARGA 574 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA 296 +GD A ++ + I + + L W HP A Sbjct: 575 LARGDRTAFAASLGQAQASAPDDPDMLAAVGAQWIDAGEPDRGLAPLHD-WIAA-HPREA 632 Query: 297 NIYTHLLSENTVGKLKRALRLEEI-NKESVESLVIVSKIA-----------------LEM 338 + L + +G R L + E + ++ A + Sbjct: 633 DADVRLRYGDLLGSAGRDDALAAWLDTLRREPSLTPAQSARIEDQSLRLVLRQTDDAIAQ 692 Query: 339 GSIDQAHAKAMLA-MKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 QA A K L LA +E+A H A A Sbjct: 693 QDYAQARKLLERASPAGRADKRYALELADLERAQGHYDA------ARAALAP 738 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 46/330 (13%), Positives = 102/330 (30%), Gaps = 36/330 (10%) Query: 72 LFHMLHKR-NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA 130 R D G L +M + LA+ + + L + Q A Sbjct: 488 WTRFALARLYRDMGLPQLGRTVM-----DDGLAQSATPEMRYATALYRNSLDDVAGAQAA 542 Query: 131 LAERQYNIAHEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 LA + + + + + + GD + +A +PD P Sbjct: 543 LAPVDDAHRSDGMRALARKLDAESALADARG----ALARGDRTAFAASLGQAQASAPDDP 598 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + AV Q++ A E R + L+ L L +A + D + Sbjct: 599 DMLAAVGAQWIDAGEPDRGLAPLHDWIAAHPREADADVRLRYGDLLGSAGRDD---ALAA 655 Query: 249 AIESLKLCDNSIMA------------SICAAKSLISQNKKRKAEVILEKIWKV-----NP 291 +++L+ + A + I+Q +A +LE+ Sbjct: 656 WLDTLRREPSLTPAQSARIEDQSLRLVLRQTDDAIAQQDYAQARKLLERASPAGRADKRY 715 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 E+A++ + A + + ++ + +++I + G+ A A+ Sbjct: 716 ALELADL-ERAQGHYDAARAALAPVVAR-TPDDADTQLALARIDEDSGNRAAALARVQAV 773 Query: 352 MKIAPRKEIFLLLAQIEQ--ANSHNTDKIL 379 + P ++ L+ + + A + + Sbjct: 774 LARTPDDDVDTQLSAVRRLNALRRPDEAVQ 803 >gi|17229979|ref|NP_486527.1| hypothetical protein all2487 [Nostoc sp. PCC 7120] gi|17131579|dbj|BAB74186.1| all2487 [Nostoc sp. PCC 7120] Length = 224 Score = 39.9 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 63/171 (36%), Gaps = 5/171 (2%) Query: 117 HNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 +N L LLE + + YN A + ++ + + + G+ +A Sbjct: 35 NNAELKRLLEDGKRLVDAGDYNGAIAVYQQAARMEPRNARIHSGIGYLHAKQGNFQAALA 94 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 +A+ I+P+ AV + A + + A + NRN + + Sbjct: 95 AYRRAIAINPNNSDFFYAVGYIKGNMGDTPGA----KEAYRRAIQLNRNNVSAYVGLGIT 150 Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + GD ++ +++KL N+ A + + ++A +L+K Sbjct: 151 QSRLGDFRSANWAFEQAIKLDRNNAQTYEFMAAMYKQRRQTKQASNLLQKA 201 >gi|332702520|ref|ZP_08422608.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] gi|332552669|gb|EGJ49713.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio africanus str. Walvis Bay] Length = 362 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 19/185 (10%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFA-VYSLYFESCRIGDLNSAQRYATKALD 182 L + + LA + A + E +++ E + L E R G+ A KA+ Sbjct: 155 LRQAKDLLASGHVDDAIREFEDIVRTQDQSEAYYMQGL--EHLRKGEYGEAIACFHKAVQ 212 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--LLIARSLENADKG 240 I+ EA+ + + + + FL + + E+ R + L + E D Sbjct: 213 INTLFAEAYEAMARAFEAKGDRQSSRMFLKKAAQVHAEFQRLEQVKELFVEVMAEEPDAE 272 Query: 241 DM--------------IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + ++KL N A A+ + KA +LE Sbjct: 273 NPFLLLGNKLYNGRDFQGAAQAYENAIKLNPNDAWARFHLARVRWMLGHRNKAVELLESC 332 Query: 287 WKVNP 291 + P Sbjct: 333 LAMRP 337 >gi|327296371|ref|XP_003232880.1| heat shock protein STI1 [Trichophyton rubrum CBS 118892] gi|326465191|gb|EGD90644.1| heat shock protein STI1 [Trichophyton rubrum CBS 118892] Length = 578 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 12/153 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + L T E R A+ A K + P+ Sbjct: 344 GDLATAITNYQKSLTEHRTPEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARE 395 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + +W A+ + K A + +R R+ + D E++ Sbjct: 396 LGNKKFKEADWPGAVEAYTEMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAI 451 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 K + A + A++L + + K + + Sbjct: 452 KRDPKFVRAYLRKAQALFAMKEYNKCLDVCTEA 484 >gi|167814145|ref|ZP_02445825.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 91] gi|167844241|ref|ZP_02469749.1| tetratricopeptide repeat protein [Burkholderia pseudomallei B7210] gi|254196773|ref|ZP_04903197.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] gi|169653516|gb|EDS86209.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13] Length = 602 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 51/341 (14%), Positives = 108/341 (31%), Gaps = 58/341 (17%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLV-----YLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 + P A + +Q N L +L ++AL A++ + + Sbjct: 47 DAPQAAFASALPEEQKDLPNVALTSQIVYQVLAAEVALQRSLPAPAYQTYLALARDTRDP 106 Query: 154 EFAVYS--LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 A + + + D +A + SP + + VL + + A L Sbjct: 107 RMAQRATEIALAAQSPADALTAANLWRE---YSPGSQRAAQVDAALLVLGGKPAEAQPML 163 Query: 212 NQKKKNAKEWNRNRAILLI--------------------------------ARSLENADK 239 +Q+ A NR +AI+ + A + + Sbjct: 164 SQELARATGENRGQAIIALQALLARGPNRVGGLTVLQDLLKNDMGRPEARLAIARQQLAT 223 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE----- 294 D + E+L++ + + A++ L +A I V +P+ Sbjct: 224 DDKDGATQSLKEALRIKPDYLPAALM----LSQMGPGERAAGIASFEKFVQQNPKSRDGR 279 Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 +A +L + K+ + + L+ ++ I ++ +D A +K+ Sbjct: 280 LALAQLYLADDRLDDAQKQFDAMRRNDSSDPTPLMAIALIKIQQKHLDDATTYLKQYVKV 339 Query: 355 APRK------EIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 A +K + ++ LAQI + +N W A Sbjct: 340 AQKKPGADVGQAYVYLAQI-ALDQNNEALAAQWLDKVDEAS 379 >gi|89899289|ref|YP_521760.1| response regulator receiver domain-containing protein [Rhodoferax ferrireducens T118] gi|89344026|gb|ABD68229.1| response regulator receiver domain protein [Rhodoferax ferrireducens T118] Length = 537 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 47/151 (31%), Gaps = 7/151 (4%) Query: 98 HNIPLARKMHSYVSQQHTFH--NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF 155 + P AR + V + L +L + Y A + + +LQ Sbjct: 179 GDYPAARTLFESVLALRSVAWAKTGLGKVL-----FYGQDYAGAVQLFQQVLQENRMYME 233 Query: 156 AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 A L +GD AQ+ A+ +SP++P + + A + Sbjct: 234 AADWLAKTLDAMGDSAQAQQVLEDAVQLSPNSPIRQKTLGDTAYRNGALDVAQAAFEKTI 293 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASY 246 K ++ + + +D+ + Sbjct: 294 KISEFSPHKNPAVYARLARVFSDQDSPEEAL 324 >gi|52346058|ref|NP_001005076.1| RNA polymerase-associated protein CTR9 homolog [Xenopus (Silurana) tropicalis] gi|82235822|sp|Q6DEU9|CTR9_XENTR RecName: Full=RNA polymerase-associated protein CTR9 homolog; AltName: Full=SH2 domain-binding protein 1 gi|49900213|gb|AAH76995.1| Ctr9, Paf1/RNA polymerase II complex component, homolog [Xenopus (Silurana) tropicalis] Length = 1172 Score = 39.9 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 12/231 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS---AQRYATKALDISPDAPWV 190 + + A L + T A+ L + +S + +KA I P P V Sbjct: 212 NKLDKARLAFGRALDLNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMV 271 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + K++S+ + L + E +A + + D ++ Sbjct: 272 LNHLANHFFFKKDYSK-VQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYY 330 Query: 251 ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304 ++ + + ++ + I + K A EK+ K P+ + ++Y Sbjct: 331 QATQFAAASFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDD 390 Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + K ++ E + VE+ + +++I LE I A + A +I Sbjct: 391 QEKRDIAKSHLKKVTEQYPDDVEAWIELAQI-LEQTDIQNALSAYGTATRI 440 >gi|326477656|gb|EGE01666.1| heat shock protein Sti1 [Trichophyton equinum CBS 127.97] Length = 569 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%) Query: 94 SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +IA LA K+ + + E L A + L T Sbjct: 306 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 353 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 E R A+ A K + P+ + + +W A+ Sbjct: 354 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 405 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K A + +R R+ + D E++K I A + A++L + Sbjct: 406 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 461 Query: 273 QNKKRKAEVILEKI 286 + K + + Sbjct: 462 MKEYNKCLDVCTEA 475 >gi|298480837|ref|ZP_06999032.1| TPR domain protein [Bacteroides sp. D22] gi|298272860|gb|EFI14426.1| TPR domain protein [Bacteroides sp. D22] Length = 676 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189 + Y+ A E LE +L++ TR + + S + D +A KAL++ P W Sbjct: 138 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 195 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+V+ +++ A N+ + A I R+L + ++ + D Sbjct: 196 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 249 Query: 250 IESLKLCDN 258 +L + N Sbjct: 250 DLALDIDPN 258 >gi|238592086|ref|XP_002392802.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553] gi|215459356|gb|EEB93732.1| hypothetical protein MPER_07575 [Moniliophthora perniciosa FA553] Length = 359 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 185 PDAPWVTEA-----VVQQYVLAK-EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENAD 238 P P + L ++ A+T +N+ + W+ +A L R Sbjct: 110 PALPENPSTGDNTLTLSLQALEAPDYPHALTLVNEALEQGISWDEGKAEALNLRGTFKFL 169 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEI 295 GD+ + D +S++L + + + A + Q+ KA +K + NP+ P+I Sbjct: 170 TGDVDGAKADFNQSIELVPSFTQSWVKIASVYMEQSDPAKAFECFDKAIEHNPNDPDI 227 >gi|212637627|ref|YP_002314152.1| TPR domain-containing protein [Shewanella piezotolerans WP3] gi|212559111|gb|ACJ31565.1| TPR repeat protein [Shewanella piezotolerans WP3] Length = 444 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 89/309 (28%), Gaps = 46/309 (14%) Query: 89 YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE--MM 146 GL+ + AR + Q +Y + L +Q A +M Sbjct: 121 SLGLLLTQQGDYDGARSHLRQAASQ---GAPAQIYAMLGYGYLQTQQPQAAKAAYSHALM 177 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 L + L + GD A + L SP+ + + W + Sbjct: 178 LAGDNRQW--QRGLLHAAMAAGDSALANSLTEQLLAASPEDAQLHRLRASLAQQQQLWEQ 235 Query: 207 AITFLNQKKKNAKEWNRNRAILLIA-----------------------RSLENADKGDMI 243 AI L ++ + + + R + D + Sbjct: 236 AIASLEIAQQLQPDDAVQWQLTQLYFDQGYYTLAQPHLQQLLESGIDGRQQRLLEVADYL 295 Query: 244 ASYHDAIESLKLCDNSIMASICAAK-----------SLISQNKKRKAEV---ILEKIWKV 289 ++ L + + + +A L N +R +L K ++ Sbjct: 296 IGQQQPQQAEALLISLLSNASLSASQRSHGLTSQALLLTDNNSQRSQSKQVGLLNKALRL 355 Query: 290 NP--HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 +P P + + + V R ++ +E+L +++ LE + +A Sbjct: 356 DPLNGPALIALAKRYETNELVQAETLYRRAAALSSVRLEALQRHAQLLLEQQAYHRAQQL 415 Query: 348 AMLAMKIAP 356 A+K AP Sbjct: 416 LRQAVKQAP 424 >gi|206969501|ref|ZP_03230455.1| TPR domain protein [Bacillus cereus AH1134] gi|229180671|ref|ZP_04308011.1| TPR domain protein [Bacillus cereus 172560W] gi|206735189|gb|EDZ52357.1| TPR domain protein [Bacillus cereus AH1134] gi|228602816|gb|EEK60297.1| TPR domain protein [Bacillus cereus 172560W] Length = 219 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFTEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHVQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALALFKKAIEIQPDHF 205 >gi|153834096|ref|ZP_01986763.1| cellulose synthase operon C protein [Vibrio harveyi HY01] gi|148869561|gb|EDL68556.1| cellulose synthase operon C protein [Vibrio harveyi HY01] Length = 1243 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 89/304 (29%), Gaps = 36/304 (11%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 YL + + Q+ A +Q T+ +A SL + +A + AL Sbjct: 377 AYLDQGDALAEKGQFKQAESLYRKAIQSDKTQPYAFTSLGALYLAQKNYAAADKAYIHAL 436 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ-----KKKNAKEWNRNRAILLIARSLEN 236 + + + ++W+ A + + K+ +++ N ++ +++AR Sbjct: 437 KLEQLNGSALRGRLDVRIEQQDWAGAASLAQRFSPAQKQVVSEKINGIQSEIILARLRVA 496 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN---PHP 293 + D + + L S + A + S K++A+ ++ W + P Sbjct: 497 IAQNDQVGMQSAVEALIALKPTSPWLRLDIAGVVRSMGDKQRADALM-AEWTASSSDPEM 555 Query: 294 EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 + A+ + + E + ++ L+ D Sbjct: 556 KFAHALYLAQDFKVEEAISELESVPEKAVTPSMQRNLT-RLKLDAELQDIQQRYLEEPAS 614 Query: 354 IAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPLWISDDGYL-----------S 402 + A++ ++ A W+ D + S Sbjct: 615 VQ---------AKLHALEQDYQGQVQA-LARLAGA-----WVEIDQAVEAERIYRSLEQS 659 Query: 403 SVWL 406 W Sbjct: 660 PHWS 663 >gi|126740549|ref|ZP_01756236.1| TPR domain protein [Roseobacter sp. SK209-2-6] gi|126718350|gb|EBA15065.1| TPR domain protein [Roseobacter sp. SK209-2-6] Length = 570 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 79/224 (35%), Gaps = 8/224 (3%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC 165 M + V+Q+ + + V LL +I +Y ++ + + + + A Sbjct: 278 MFARVAQKLSAEHVDAV-LLSAEILDQLGRYELSIDTYKKVPRNHPDYYAAEMGRAEALR 336 Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R +A + + P P V+ ++ +E++ AI + N +R Sbjct: 337 RSAKPEAATEVLEQLVREFPTLPQVSVSLGDLLRQQEEYAGAIKAYDSALANTPTEANSR 396 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILE 284 LL AR + + + D SL L S + + Q K +A +++ Sbjct: 397 WFLLYARGISHERLSHWPEAEADFRSSLALRPESPQVLNYLGYSLVEKQEKLDEALDMIQ 456 Query: 285 KIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINK 322 + P +Y E VG ++RA+ L ++ Sbjct: 457 RAVAARPESGYIVDSLGWVLYRLGRYEEAVGHMERAVALMPVDP 500 >gi|123448512|ref|XP_001312985.1| TPR Domain containing protein [Trichomonas vaginalis G3] gi|121894852|gb|EAY00056.1| TPR Domain containing protein [Trichomonas vaginalis G3] Length = 494 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 66/242 (27%), Gaps = 52/242 (21%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 HN A +M + + L L L + A + + A Sbjct: 284 HNSDAAVQMFQRAAGIDHSCSYPLA--LAGHELLLLDSLSEASKLFRESIDRNPQEWSAW 341 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y L + + +AQ Y KALD +PD+ Sbjct: 342 YGLGSVHFKQDNFGAAQYYMRKALDANPDSS----------------------------- 372 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMA---SICAAKSLISQ 273 +L ++ G+ + ++ L N + + AA S Sbjct: 373 ---------VLHYVYAMILRKCGNEEEASEHFDLAISLDPSNLVPVFQKGVMAADS---- 419 Query: 274 NKKRKAEVILEKIWKVNPH-PEIA---NIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 +A +L K + PH P IA + L + L + E E Sbjct: 420 GDPIEALELLNKAESLAPHEPGIAYTKAVIAESLGDTAGAAEMYTNALVFGHPEKKEIHS 479 Query: 330 IV 331 + Sbjct: 480 AL 481 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 76/245 (31%), Gaps = 19/245 (7%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESC-RIGDLNSAQRYATK 179 LV LL + +Y A + +I V +Y + ++ D + + Sbjct: 203 LVLLLSAEYYFRCSKYTEAAAIFSRLYEIHPHTVLGV-DIYSTTLWQLKDEKKLNEVSRR 261 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 AL+I+P+ P A + A+ + + + + + L E Sbjct: 262 ALEIAPNKPESWVAAGNLLSIQHNSDAAVQMFQRA--AGIDHSCSYPLALAGH--ELLLL 317 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IA 296 + + ES+ A Q+ A+ + K N P+ + Sbjct: 318 DSLSEASKLFRESIDRNPQEWSAWYGLGSVHFKQDNFGAAQYYMRKALDAN--PDSSVLH 375 Query: 297 NIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +Y + E A+ L + ++ + +A + G +A A Sbjct: 376 YVYAMILRKCGNEEEASEHFDLAISL---DPSNLVPVFQKGVMAADSGDPIEALELLNKA 432 Query: 352 MKIAP 356 +AP Sbjct: 433 ESLAP 437 >gi|147905822|ref|NP_001086446.1| RNA polymerase-associated protein CTR9 homolog [Xenopus laevis] gi|82249387|sp|Q4QR29|CTR9_XENLA RecName: Full=RNA polymerase-associated protein CTR9 homolog; AltName: Full=SH2 domain-binding protein 1 gi|67677972|gb|AAH97638.1| LOC446236 protein [Xenopus laevis] Length = 1157 Score = 39.9 bits (92), Expect = 0.98, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 12/231 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS---AQRYATKALDISPDAPWV 190 + + A L + T A+ L + +S + +KA I P P V Sbjct: 212 NKLDKARLAFGRALDLNPTCVGALVGLAVLELNNKEADSIKNGVQLLSKAYTIDPSNPMV 271 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + + K++S+ + L + E +A + + D ++ Sbjct: 272 LNHLANHFFFKKDYSK-VQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYY 330 Query: 251 ESLK-LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIYTHLLS 304 ++ + + ++ + I + K A EK+ K P+ + ++Y Sbjct: 331 QATQFAAASFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASDD 390 Query: 305 ENTVGKLK-RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + K ++ E + VE+ + +++I LE I A + A +I Sbjct: 391 QEKRDIAKSHLKKVTEQYPDDVEAWIELAQI-LEQTDIQNALSAYGTATRI 440 >gi|294812872|ref|ZP_06771515.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|326441351|ref|ZP_08216085.1| hypothetical protein SclaA2_09804 [Streptomyces clavuligerus ATCC 27064] gi|294325471|gb|EFG07114.1| secreted protein [Streptomyces clavuligerus ATCC 27064] Length = 485 Score = 39.9 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 33/291 (11%), Positives = 79/291 (27%), Gaps = 18/291 (6%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 + +Y L+ + + +H + + + L Q+ Sbjct: 146 RAQQQRPRRWTVYRALIDAQSGVGAY-KAVHGALDRLTALYQGSQSRALAAQVYRERGWR 204 Query: 137 NIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + A R A+ L + G+ A AL ++P+ Sbjct: 205 EDASANAYDAVAAAAGTTERAVALRRLGDLAWERGEPREAVAGYDAALRLAPELHPARAG 264 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS--YHDAIE 251 + A+ + SL ++ + + A Sbjct: 265 RARALAALGRTDAALAEYRAALTRFPLPEYALEAGELYESLGRHEEAEESYAAVLETADR 324 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIAN-----IYTHLLSE 305 + + + ++ + +A +L W+ +IA+ +Y ++ Sbjct: 325 AERYGVD---QTLTRGRYEADHGDPDEAVRLLTDAWEAGRRSTQIADGLGWALYRAGRAD 381 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + KRA + + +I +G A A+++ P Sbjct: 382 EALPYAKRATKEGLRSPLFAYHR---GQIERSLGLYGSARRNIGTALRVNP 429 >gi|284097543|ref|ZP_06385614.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] gi|283830950|gb|EFC34989.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3] Length = 547 Score = 39.9 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 94/291 (32%), Gaps = 17/291 (5%) Query: 75 MLHKRNYDKGYKALYTGLMSIAA-----HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI 129 K D G A +++ N+ AR+ + Q H L + Sbjct: 148 WFQKSVKDAGEDAPVAWYVALGQIETERGNLEQARRYYIVAVQLHPETTAAYNNL--GHV 205 Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 L + + A L T A + R AQR+ +A+ +PD P Sbjct: 206 LLKLNRIDEADAAFREALTQDKTLASAAFGRGEVGARRRQFTVAQRFYERAIRHAPDEPL 265 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 +++ A + ++ E R +A I +KG + Sbjct: 266 FHKSLADTLRNIGNTEDAEAAEARYRRKLAERYRRQAHWFI-------EKGQPQRALTPL 318 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS---EN 306 +++ + A A + K A+ +++ ++ P+ A ++ ++ N Sbjct: 319 QKAIASDETFTFALKDYAYVQMQLGKFADAKQSYQRVLRIEPNSRQALLHLGMIEAKFGN 378 Query: 307 TVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + L L + + +++ V ++ + G + A + + P Sbjct: 379 QATAVSHYLALIQHEPDFMDTYVQLANLQESAGDLQAAEHALTMGIHHEPT 429 >gi|302877718|ref|YP_003846282.1| TPR repeat-containing protein [Gallionella capsiferriformans ES-2] gi|302580507|gb|ADL54518.1| TPR repeat-containing protein [Gallionella capsiferriformans ES-2] Length = 585 Score = 39.9 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 72/249 (28%), Gaps = 16/249 (6%) Query: 116 FHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQR 175 +E L L + A +A E + + ++ A + + GD+N A Sbjct: 60 LSSELLYEFLLAEFASQRGHQALAVEGSQELARLTRDPRLAKRA-AQLALESGDMNRAVE 118 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + P A T + + A + K+ + + L + Sbjct: 119 AFRFWQETEPSALMATRILSSLLLRGGRLDEARIEFVKVLKSEEPAVGAVFMQLYTMAAS 178 Query: 236 NADKGDMIASYH-------DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 DK ++ E+ L A++ + ++ ++ R+A L+ W Sbjct: 179 YPDKAAVLQLMRELAAPYPQVAEAHWLVAQLATAAL---EEKLALSEVRRA-RELKPEWD 234 Query: 289 VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKA 348 P L L R ++ + + ++ L A + Sbjct: 235 A---PVSLEAQL-LNKSEPQKSLALLQRHLSVHPAAGGIRLQYARALLTQKQYQAAREEF 290 Query: 349 MLAMKIAPR 357 L +P Sbjct: 291 QLLATASPD 299 Score = 37.2 bits (85), Expect = 7.0, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 92/271 (33%), Gaps = 9/271 (3%) Query: 86 KALYTGLMS-IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 + LY L++ A+ A + + L Q+AL N A E Sbjct: 63 ELLYEFLLAEFASQRGHQALAVEGSQELARLTRDPRLAKR-AAQLALESGDMNRAVEAFR 121 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + + A L R G L+ A+ K + + P V +Q Y +A + Sbjct: 122 FWQETEPSALMATRILSSLLLRGGRLDEARIEFVK--VLKSEEPAVGAVFMQLYTMAASY 179 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 L ++ A + A + + + + + +L Sbjct: 180 PDKAAVLQLMRELAAPYP-QVAEAHWLVAQLATAALEEKLALSEVRRARELKPEWDAPVS 238 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHP---EIANIYTHLLSENTVGKLKRALRLEEIN 321 A+ L ++++ +K+ +L++ V+P + L + + L + Sbjct: 239 LEAQLL-NKSEPQKSLALLQRHLSVHPAAGGIRLQYARALLTQKQYQAAREEFQLLATAS 297 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 ++V+ ++ I+L++ + A + A+ Sbjct: 298 PDNVDLAFAIALISLQLNDLSGAELQFKAAL 328 >gi|94265133|ref|ZP_01288897.1| TPR repeat [delta proteobacterium MLMS-1] gi|93454372|gb|EAT04673.1| TPR repeat [delta proteobacterium MLMS-1] Length = 438 Score = 39.9 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEM-MLQIPATREFAVYSLYFESCRIGDLNSAQRYAT 178 + L + A +Y A E +L P + + L R+G A++Y Sbjct: 63 PEINFLLGRAAFETGRYEEAVMAYERVLLSNPESGRARLE-LARAYMRLGSGEIARQYFR 121 Query: 179 KALDISP 185 + L +P Sbjct: 122 EVLATNP 128 >gi|270264731|ref|ZP_06192996.1| hypothetical protein SOD_i01480 [Serratia odorifera 4Rx13] gi|270041414|gb|EFA14513.1| hypothetical protein SOD_i01480 [Serratia odorifera 4Rx13] Length = 258 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 63/200 (31%), Gaps = 20/200 (10%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML 147 L GL++ + + P + EYL + N A + LE Sbjct: 20 LAAGLLAGCSGSSPEKDAQPEAGQTRLQLGLEYLK----------QGDLNAARQNLEKAA 69 Query: 148 ----QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 Q T+ + RIG+ +A++ +AL ++P+ V + Sbjct: 70 DAAPQDYRTQL----GMALYEQRIGENGAAEQRYQQALKLAPNNGTVLNNYGAFLCSLGQ 125 Query: 204 WSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 + A + ++ G + +LK+ + Sbjct: 126 YVPAQQQFSAAALAPDYGQVADSLENAGYC--FLKAGQNDEARTLLTRALKVDPDKGTPL 183 Query: 264 ICAAKSLISQNKKRKAEVIL 283 + A+ + K+ +++++L Sbjct: 184 LVEAEKQFGEGKRAQSQLLL 203 >gi|196232370|ref|ZP_03131223.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] gi|196223442|gb|EDY17959.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus Ellin428] Length = 779 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 19/195 (9%), Positives = 55/195 (28%), Gaps = 11/195 (5%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 G + A A+ + PD + A+ + E+ Sbjct: 32 AQGRTDEAIAAYDHAILLKPDYTEAHYNRGNALRSQGKLEEALAAFCKAIVLKPEY---- 87 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 A + + G + + + +++ + A + + A + Sbjct: 88 AEAYYNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYRR 147 Query: 286 IWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 ++ P A + +L + + + L + + E+ + E Sbjct: 148 AIQIR--PNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQFPEAYHNLGMALAEQRR 205 Query: 341 IDQAHAKAMLAMKIA 355 +++A A+++ Sbjct: 206 LEEATQAYRRALELN 220 Score = 38.0 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 67/209 (32%), Gaps = 20/209 (9%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 R G SA +A+ I P+ + A + + AIT ++ Sbjct: 134 RRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQFPEAY 193 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 L +A + E + +Y A+E + +LI Q + Sbjct: 194 HNLGMALA-EQRRLEEATQAYRRALELNSNAPQ--PWNNL-GTTLIEQGLFTEGATACNH 249 Query: 286 IWKVNPHPEIANIYTHLLSENTVGKLKRA-LRLEEIN------KESVESLVIVSKIALEM 338 ++ P+ A+ ++L + L R + ++ + + + Sbjct: 250 ALALD--PDFADAQSNL--GVALAGLNRFAEAIAAFRSALQLQPDNATVHFNLGNVFRDQ 305 Query: 339 GSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 ++DQA + A+ + P + + I Sbjct: 306 RNLDQAVDEYQRALTLEP-----MFMEAI 329 >gi|168757794|ref|ZP_02782801.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4401] gi|168761165|ref|ZP_02786172.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4501] gi|168768648|ref|ZP_02793655.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4486] gi|168798926|ref|ZP_02823933.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC508] gi|195936695|ref|ZP_03082077.1| hypothetical protein EscherichcoliO157_09575 [Escherichia coli O157:H7 str. EC4024] gi|208806760|ref|ZP_03249097.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4206] gi|217327817|ref|ZP_03443900.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14588] gi|254794498|ref|YP_003079335.1| hypothetical protein ECSP_3493 [Escherichia coli O157:H7 str. TW14359] gi|261223016|ref|ZP_05937297.1| hypothetical protein EscherichiacoliO157_00205 [Escherichia coli O157:H7 str. FRIK2000] gi|261259433|ref|ZP_05951966.1| hypothetical protein EscherichiacoliO157EcO_27026 [Escherichia coli O157:H7 str. FRIK966] gi|189355290|gb|EDU73709.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4401] gi|189362314|gb|EDU80733.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4486] gi|189368379|gb|EDU86795.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4501] gi|189378652|gb|EDU97068.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC508] gi|208726561|gb|EDZ76162.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4206] gi|217320184|gb|EEC28609.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. TW14588] gi|254593898|gb|ACT73259.1| conserved protein [Escherichia coli O157:H7 str. TW14359] gi|326340354|gb|EGD64158.1| hypothetical protein ECF_04070 [Escherichia coli O157:H7 str. 1125] gi|326345038|gb|EGD68782.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. 1044] Length = 1093 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|241206107|ref|YP_002977203.1| adenylate/guanylate cyclase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859997|gb|ACS57664.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 595 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 9/127 (7%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPW-VTE 192 A + + + P + E + L GD A ++ + P P + + Sbjct: 439 DRAQAEVQ-QGLALQPNSAELLL--LMAHIQIFSGDPAGALETLDASMRLDPHHPEILFQ 495 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + E+ +AI + Q+ + + A+L + D+ S ++ Sbjct: 496 FRADAHFSLGEYEQAIAAIEQRLQQNSQSETAYALLASCY--GHLDR--PEESRQAWEKA 551 Query: 253 LKLCDNS 259 L++ + Sbjct: 552 LRINPDF 558 >gi|21674447|ref|NP_662512.1| TPR domain-containing protein [Chlorobium tepidum TLS] gi|21647633|gb|AAM72854.1| TPR domain protein [Chlorobium tepidum TLS] Length = 551 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 43/139 (30%), Gaps = 8/139 (5%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM--MLQIPATREFAVYSL 160 AR + + YL YL +A R Y+ A E +L+ T + L Sbjct: 75 ARVYGEAAVRLDPSNRYYLRYL--AVVAHDMRDYDRAAELYGQASLLEPDRTEIMYLQGL 132 Query: 161 -YFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 Y + R L A KA+ I P + + K + AI Q K Sbjct: 133 EYMAAKR---LEPALEVFRKAVRIDPYNEAAFAQTLALEIALKHYPEAIDTSKQLLKLGG 189 Query: 220 EWNRNRAILLIARSLENAD 238 + L + + Sbjct: 190 NERKIGITLAELYTKTGQE 208 >gi|11467297|ref|NP_043154.1| photosystem I assembly protein Ycf3 [Cyanophora paradoxa] gi|1351776|sp|P48191|YCF3_CYAPA RecName: Full=Photosystem I assembly protein ycf3 gi|1016098|gb|AAA81185.1| ycf3 [Cyanophora paradoxa] Length = 173 Score = 39.9 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 10/99 (10%) Query: 126 EVQIALAERQYNIA-HEKLEMML--QIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A +E Y A E + + P + + Y++ GD A Y +ALD Sbjct: 41 DGMSAQSEGAYAEALENYYEALRLEEDPYDKSYTFYNIALIHTSNGDQTKALEYYRQALD 100 Query: 183 ISPDAPWVTE--AVV-----QQYVLAKEWSRAITFLNQK 214 ++P P AV+ +Q + A +Q Sbjct: 101 LNPKMPQALNNMAVIYHAQGEQAAEQGDMEMAEALFDQA 139 >gi|326427496|gb|EGD73066.1| RDX protein [Salpingoeca sp. ATCC 50818] Length = 630 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 62/175 (35%), Gaps = 24/175 (13%) Query: 99 NIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH-----EKLEMMLQIPATR 153 + ++M + ++ + +L + A + + A ++ E + Sbjct: 303 DTIEVQQMKAQAREEKALRHAERAHLAREKQARMDAERKRAELEKRVKEYEAEARR---- 358 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 ++ + +A+ K + +A ++ L ++ +I + Sbjct: 359 -------AMQALAQSEK-TARDLEEKMKRVEAEAAERERLRLEAERLKRQAEESIAQMRS 410 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAK 268 + ++E R ++AR+ E +K + + E + ++ A++ AAK Sbjct: 411 SQTASEEEKRM----ILARTREAEEKAKQLEAEAAKRE--RDAEDLQ-AALMAAK 458 >gi|320640898|gb|EFX10386.1| hypothetical protein ECO5101_04692 [Escherichia coli O157:H7 str. G5101] Length = 1093 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|296122435|ref|YP_003630213.1| hypothetical protein Plim_2188 [Planctomyces limnophilus DSM 3776] gi|296014775|gb|ADG68014.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus DSM 3776] Length = 442 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 18/165 (10%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 G+ +A + +AL ++P + + + ++ A + + E+ Sbjct: 293 LDSGETVAAIQAFRRALLLAPHEASIHFQLADALYRSGNYAGAAERYHVAVECDAEYIEA 352 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 L + GD A+ +L L + A + A+ + KA Sbjct: 353 WTQLGCVLA----QMGDTKAASEAFEAALLLHPDYPDAHLHLAELFEQIGQHLKA----- 403 Query: 285 KIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 PH Y + + R RLE + ++ ES + Sbjct: 404 -----RPH---WLRYLDFDNRGPWADMAR-ERLERSHGDASESPL 439 >gi|163847447|ref|YP_001635491.1| hypothetical protein Caur_1887 [Chloroflexus aurantiacus J-10-fl] gi|222525297|ref|YP_002569768.1| tetratricopeptide repeat-containing protein [Chloroflexus sp. Y-400-fl] gi|163668736|gb|ABY35102.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus J-10-fl] gi|222449176|gb|ACM53442.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl] Length = 324 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 86/262 (32%), Gaps = 33/262 (12%) Query: 20 IVSHYPEDVSITWGNRLYRTSP--FVILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLH 77 ++H+ W ++ +P I+++L + + ++L L L L Sbjct: 15 WIAHH-------WIGQVLLRTPELPGIIAVLLWMVLGGVVLINALPAVLCSLWFLSRYLL 67 Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R + Y+ L A ++ + F + V+ L IAL + Sbjct: 68 IR---QTYRLL-------NNGQYHSAMRLAQIAKSLNPFSAD--VHWLLGLIALQRNRPR 115 Query: 138 IAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 +A + L+ + A+ + + E+ + A +YA KAL ++P + Sbjct: 116 VAIDHLKKACRLDPDNPQVYAALSAAFVEA---EEPKLAIQYAKKALAMNPGLYGAAMVL 172 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 +++ + ++ N RA+ A + + G + + + Sbjct: 173 SDCTPDSEQ----VEHYLRQMINTVRRPVERAVACCALANYLIEIGRRSEAESFLAQVIP 228 Query: 255 LCDNSIMASICAAKSLISQNKK 276 L AS + + Sbjct: 229 LVPACPPAS--RGQLHYRLGEL 248 >gi|72161803|ref|YP_289460.1| hypothetical protein Tfu_1399 [Thermobifida fusca YX] gi|71915535|gb|AAZ55437.1| hypothetical protein Tfu_1399 [Thermobifida fusca YX] Length = 367 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 79/268 (29%), Gaps = 9/268 (3%) Query: 110 VSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQI--PATREFAVYSLYFESCRI 167 S + + + A E E ++ P R A L + Sbjct: 7 ASPPRLDDPAAATLCSQARDLAEAGHADRAAELYERVVADAGPRYRAQAALGLAVVRDHL 66 Query: 168 GDLNSAQRYATKALDIS-PDAPWVTEAVVQQYVL-AKEWSRAITFLNQKKKNAKEWNRNR 225 GD A++ A+ + P+ + + A + R Sbjct: 67 GDTAGARQADETAIAAADPEFSPRAAYHLALLCEKEGDGDAAARAWQTVVEFGN--QRYL 124 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCD--NSIMASICAAKSLISQNKKRKAEVIL 283 + +GD + +L D A+ A+ L+ + +A +L Sbjct: 125 GAAHHGLARLAEARGDDETARSHWQYALNAADPQTVADAAREYARRLLERGAAAEAAEVL 184 Query: 284 EKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINK-ESVESLVIVSKIALEMGSID 342 + + P++ + + E + + AL + + ++ + +++++ G Sbjct: 185 ARGLAAHDTPDLRLLLGAVRVEQAIAEFDTALAQQPADPHDTAVARELLARLLAVRGDSA 244 Query: 343 QAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 A + + + A++ + Sbjct: 245 TAERVWYDGLTHDDPQTAAEVRARLRRG 272 Score = 38.0 bits (87), Expect = 4.1, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 18/210 (8%) Query: 81 YDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAH 140 + AL ++ + AR+ + E + A Sbjct: 50 RYRAQAALGLAVVRDHLGDTAGARQADETAIAAADPEFSPRAAYHLALLCEKEGDGDAAA 109 Query: 141 EKLEMMLQIPATREFA--VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQY 198 + +++ R + L + GD +A+ + AL+ + V +A + Sbjct: 110 RAWQTVVEFGNQRYLGAAHHGLARLAEARGDDETARSHWQYALNAADPQT-VADAAREY- 167 Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILL-----IARSLENADKGDMIASYHDAIESL 253 A L + R + + L IA + A+ Sbjct: 168 --------ARRLLERGAAAEAAEVLARGLAAHDTPDLRLLLGAVRVEQAIAEFDTALAQQ 219 Query: 254 KLCD-NSIMASICAAKSLISQNKKRKAEVI 282 ++ +A A+ L + AE + Sbjct: 220 PADPHDTAVARELLARLLAVRGDSATAERV 249 >gi|17547886|ref|NP_521288.1| hypothetical protein RSc3167 [Ralstonia solanacearum GMI1000] gi|17430192|emb|CAD16955.1| probable tpr domain protein [Ralstonia solanacearum GMI1000] Length = 296 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 81/221 (36%), Gaps = 17/221 (7%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A KAL I PD ++ + +W L + A E N AI Sbjct: 47 AKMAARKALQIEPDLGEAYASLAHVRLHDWDWVD----LERDFLRAIELNPGHAIAYYWY 102 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 + G + +S ++ + + + A L + +A L K +++P Sbjct: 103 AEYLMMAGRAEDAIARVRQSQQMDPLNSVLNSSVAIILYLARRYDQAREELNKALEIDPN 162 Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 H + +Y + + ++++A+ L S E+L +++ + A Sbjct: 163 HFLLHFRLGLVYQQQKLFHDAIEEMQKAVTLSGR---STEALTGLAQT-YAAADMRAAMQ 218 Query: 347 KAMLAMKIAPRKEIF--LLLAQIEQANSHNTDKILYWTQSA 385 + + A++ + +A++ + + ++ W + A Sbjct: 219 QIVDALETESEQHYVHPYNMAKV-FGSLGDKEQTFGWLEKA 258 >gi|27382848|ref|NP_774377.1| adenylate cyclase [Bradyrhizobium japonicum USDA 110] gi|27356021|dbj|BAC53002.1| blr7737 [Bradyrhizobium japonicum USDA 110] Length = 619 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 47/180 (26%), Gaps = 24/180 (13%) Query: 92 LMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPA 151 L++ + + +E L A L Sbjct: 297 LIAPETGEQLWTGRYDRDIGDFFAMQDEITTNLSAAIATEI----VRAEASAPARLSTDV 352 Query: 152 T---REF-AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL------- 200 T R + Y + DL +A +A+ + P + + Sbjct: 353 TAWDRFLKGLSHYYRQ--TKEDLAAAIDLFREAIAVDPKLSIAHAYLATIQIQSIQFGWV 410 Query: 201 ---AKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 + W+ A+ + + +IL A ++E G A+ A ++ L Sbjct: 411 KGTREMWAEAMNLAETSVRLDPRSSFAFSILSWAHAME----GHYEAAMDAAKRAVALNP 466 >gi|87306864|ref|ZP_01089010.1| probable tetratricopeptide repeat family protein [Blastopirellula marina DSM 3645] gi|87290237|gb|EAQ82125.1| probable tetratricopeptide repeat family protein [Blastopirellula marina DSM 3645] Length = 650 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 22/164 (13%) Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE-- 280 AILL + +G + + A ++ + D+ + A +L + R AE Sbjct: 310 SEEAILLYLLAEAKLVQGKIDQATTVADQAHHMNDSLLDNVFLTADALHKRGLIRWAERE 369 Query: 281 --VILEKI------WKVNPHPEIANIYTHLLSENTVGKL------------KRALRLEEI 320 +++K + P ++ + + KR EE Sbjct: 370 YRRVIDKEGPFSPRYSAWPTRQLGEMLADRKRYADAAGVYKPLVDVYDAETKRGKTSEEA 429 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLL 364 + +++ A + G I+ A + A + P + L++ Sbjct: 430 EGDRSRYHYFLARAAEKRGDIEAAKEELKKANQRDPFEVDVLIM 473 >gi|116751065|ref|YP_847752.1| peptidase M48, Ste24p [Syntrophobacter fumaroxidans MPOB] gi|116700129|gb|ABK19317.1| peptidase M48, Ste24p [Syntrophobacter fumaroxidans MPOB] Length = 480 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 4/132 (3%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL A + A Y + R GD A +A+ + P +P Sbjct: 275 AALIADYSEPARAMERFTAGVKKREAEAFYGMGRLYMRQGDNAQALSMLQEAVRLRPGSP 334 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 ++ ++ + Y A L + + I +L D+G + Sbjct: 335 FILSSLGKVYHQLGRLPEAQKALQTAL----LMDSSTIIAQYRLALVLQDQGKREEALEH 390 Query: 249 AIESLKLCDNSI 260 + + Sbjct: 391 LQSIQRYALSFP 402 >gi|309790290|ref|ZP_07684858.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] gi|308227678|gb|EFO81338.1| TPR repeat-containing protein [Oscillochloris trichoides DG6] Length = 290 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 4/112 (3%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + A AL + P + + Y+ + AI+ L Q + + Sbjct: 76 AVEAAQYQRGLQLARIALYLYPFSADTHALLGSLYLGMGQAGAAISALRQAVR----YYP 131 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 +A L +A S + A+ +A +L+L A + A + + N Sbjct: 132 LQAGLHVALSAALLEDEQPQAALEEASRALQLDPRYAPAYLHHASAAEALNN 183 >gi|307824966|ref|ZP_07655188.1| PAS/PAC sensor hybrid histidine kinase [Methylobacter tundripaludum SV96] gi|307734013|gb|EFO04868.1| PAS/PAC sensor hybrid histidine kinase [Methylobacter tundripaludum SV96] Length = 1759 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 20/175 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPA------TREFAVYSLYFESCRIGDLNSAQRYATKA 180 ++ A E + ML+ +A+ L + GDL SA+ +A Sbjct: 228 AIAYELSDHFSEAGEYYQRMLEQARIAGSRLMEAYALLGLGYTHNNRGDLKSAEPLIREA 287 Query: 181 LDIS-----P-DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI--LLIAR 232 + + P + A+ + ++ + ++ + + + + +L AR Sbjct: 288 VAVFHAIDVPFSVNFSQFALADNLRKQQRYAETLPIFDEVIERYQRYPNKIGLWWVLNAR 347 Query: 233 SLENADKGDMIASYHDAIESLKLCDN------SIMASICAAKSLISQNKKRKAEV 281 S G + ++ D ++ KL ++ A+ ++ R+A Sbjct: 348 STHQMALGHIADAHRDVEQAYKLAKEIGVPLYLTDSAKRLAEIAAAKGDYRQAYR 402 >gi|296282214|ref|ZP_06860212.1| transmembrane protein [Citromicrobium bathyomarinum JL354] Length = 642 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 25/218 (11%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVL------AKEWSRAITFLNQKKKNAKEWN 222 D + A++ ++AL I A + V EW+ A+ + K A+ + Sbjct: 204 DFDYAKQLHSEALAIQLKLGMSDLAANELLVRGYTKLKDGEWTDAVADFRESAKQARSYG 263 Query: 223 RNRAILL-----IARSLENADKGDMIASYHDAIESLKLCDNS--IMASICAAKSLISQNK 275 A+ + E D A + L D + + A+ AK + + Sbjct: 264 NQYAVDYALLGVCQAASEGGKIADAAPECERAYQGLGKPDEAMALPATALMAKLFVERGN 323 Query: 276 KRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK-RALRLEEINKESVESLVIVSKI 334 +A IL+ P IA S++ V L+ RA L + + ++ + + Sbjct: 324 PGRALAILD--------PMIAKGKQENASDDWVMALETRAQALFALG-RNAQAYEQMREA 374 Query: 335 ALEMGSIDQAHAKAMLAMKIAP--RKEIFLLLAQIEQA 370 + A ++ A A +E+ LLA+ E+A Sbjct: 375 NEAAKTFHNADMQSGAAALQARFQTRELQNLLAEEERA 412 >gi|260752475|ref|YP_003225368.1| cellulase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551838|gb|ACV74784.1| Cellulase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 1667 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 36/98 (36%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 +I + A ML+ A+ + + + G+ + A++ + ++P Sbjct: 554 ARIYQDAGLTDKAQSLYHYMLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPG 613 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 P+V A + + +A+ L + + + R Sbjct: 614 NPYVYLASARFEKSKSDDEQALKDLKKAHRVYQRMVRQ 651 Score = 38.0 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 28/249 (11%) Query: 122 VYLLEVQIALAE--RQYNIAHEKLEMMLQIP--ATREFAVY--SLYFESCRIGDLNSAQR 175 + + + + A L + P + + + L ++GD+ A Sbjct: 402 INIALARAKRMSLYGRRGDAIGLLRSLANDPNRSISQLGMIADGL----LQLGDVEDAAF 457 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL-----NQKKKNAKEWNRNRAILLI 230 A +L + +A + + + A F+ + + + L I Sbjct: 458 LAEHSLSLPLGEANDYQASLSVLIRTGHYDTASDFISQIASEMSRHDQNGYKMLNRTLAI 517 Query: 231 ARSLENADKGDMIAS---YHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 AR+ K + + H A E DN + A+ KA+ + + Sbjct: 518 ARADMMRQKKLYMPAFDVLHQAWEETGGGDNILP---VLARIYQDAGLTDKAQSL--YHY 572 Query: 288 KVNPHPEIANIYTH----LLSENTVGKLKRA-LRLEEINKESVESLVIVSKIALEMGSID 342 + HP A+ + + + ++A RL+++ + + ++ + Sbjct: 573 MLRNHPRDASALLNSLTIAQQQGNDDRAEQALRRLKKVAPGNPYVYLASARFEKSKSDDE 632 Query: 343 QAHAKAMLA 351 QA A Sbjct: 633 QALKDLKKA 641 >gi|219118732|ref|XP_002180133.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408390|gb|EEC48324.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1008 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 8/128 (6%) Query: 166 RIGDLNSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 G + +A+ AL + P W+ +++ L ++ ++A Sbjct: 578 ARGSVVTARSILAHALRVFPSKRVLWMQAVELERQ------HGTAVTLEERLRDATHALP 631 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 I + R+ E G + + ++ +S + AAK ++ +A V+ Sbjct: 632 RVEIFWLLRAKEQWMAGKVDEARQILTDAFAANPDSESVWLAAAKLEWENDELERARVLF 691 Query: 284 EKIWKVNP 291 + + P Sbjct: 692 ARARERAP 699 Score = 36.8 bits (84), Expect = 9.0, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 86/299 (28%), Gaps = 42/299 (14%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDA- 187 A E + L L+ T L+ + + + + A+ A++ P Sbjct: 405 AASLETADSAKKAVLRKALEANPTSTL----LWKAAIDLEEADDARVLLAVAVEKVPQDV 460 Query: 188 -PWVTEAVVQ-QYVLAKEWSRAITFL--------NQKKKNAKEWNRNRAILLIARSLENA 237 W+ A ++ K ++A L K + + + ++ R++ + Sbjct: 461 DLWLALARLETYQSAQKVLNKARKALPSDRSVWLAAAKLEESQDHVDTVSKIVDRAVRSL 520 Query: 238 DKGDMIASYHDAIE----SLKLCDNSIMASICA-------------------AKSLISQN 274 K D + S +E + A+I AK+ +++ Sbjct: 521 RKQDAVISREQWLEEAEKAESADAPITSAAIIHHTIGQDVEEEDCLRTWSEDAKACVARG 580 Query: 275 KKRKAEVILEKIWKVNPH-PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIV 331 A IL +V P + L V +R ++ Sbjct: 581 SVVTARSILAHALRVFPSKRVLWMQAVELERQHGTAVTLEERLRDATHALPRVEIFWLLR 640 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSAL-HAM 389 +K G +D+A A P E L A + + ++ A A Sbjct: 641 AKEQWMAGKVDEARQILTDAFAANPDSESVWLAAAKLEWENDELERARVLFARARERAP 699 >gi|326318316|ref|YP_004235988.1| hypothetical protein Acav_3522 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375152|gb|ADX47421.1| Tetratricopeptide repeat-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 602 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 15/206 (7%) Query: 192 EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 +A+ Q Y A + + A + + + E + A GD + A + Sbjct: 173 QAIPQLYGRAPDKAAAAAIVEKALADQLENPAAGPLAWTALGRMRLAAGDRKGALEAARK 232 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTH--LLSENTVG 309 +L A++ + + L+ + ++ + P PEI Y L + Sbjct: 233 ALAQEPTLDAAALLSLQ-LMEAGEADAEPLVARYMGGGKPQPEIRMAYAGVLLNLQRYSE 291 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI-------APRKE--- 359 + L + E+ ++ + +AL+ + ++ A ++ PRK Sbjct: 292 AGTQVDLLTREAPDMAEAWLLKATLALQSDRLQESEAALEQFERLLQSYPPADPRKAAIG 351 Query: 360 -IFLLLAQIEQANSHNTDKILYWTQS 384 +LL +QI + + + W Sbjct: 352 QAYLLRSQIAEK-RGDLAQAEAWLGK 376 Score = 36.8 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 56/205 (27%), Gaps = 16/205 (7%) Query: 103 ARKMHSYVSQQHTFHN-EYLVYLLEVQIALAE-----RQYNIAHEKLEMMLQI----PAT 152 A K + E LL Q A + + + + Sbjct: 361 AEKRGDLAQAEAWLGKIENSAELLAAQTRRASLLARQGKLDEGIALIRRLPARNPLEERQ 420 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + A L ++ + A KA+ ++P+ + A + + L Sbjct: 421 KLVAEAQLLRDAKQ---YQKAFEVQGKAVAMAPEDYDLAYDQAMLAEKAGDLAGMERLLR 477 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 Q + +++ L + + + + ++L + Sbjct: 478 QIIEKRPDYHHAYNALGYSLA---ERGIRLQEARQLIQKALTYAPKDPFITDSLGWVEFR 534 Query: 273 QNKKRKAEVILEKIWKVNPHPEIAN 297 +A +L ++ P PEIA Sbjct: 535 LGNHAEAARLLGDAFQRQPDPEIAA 559 >gi|82777923|ref|YP_404272.1| hypothetical protein SDY_2738 [Shigella dysenteriae Sd197] gi|81242071|gb|ABB62781.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 638 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNEYL---VYLLEVQIALAERQYNIAHEKL 143 L ++ + P A + ++ H + L+ + QY A E Sbjct: 519 LALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDF 578 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 ++ Y L + R G+ ++ + ++L P V Sbjct: 579 WRAAWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEV 625 >gi|197098400|ref|NP_001126143.1| dnaJ homolog subfamily C member 7 [Pongo abelii] gi|75061769|sp|Q5R8D8|DNJC7_PONAB RecName: Full=DnaJ homolog subfamily C member 7 gi|55730501|emb|CAH91972.1| hypothetical protein [Pongo abelii] Length = 494 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 16/182 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKA 180 +L+ + +Y A +L++ +T V L + A ++ +A Sbjct: 179 KILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCL--YYEDCIEKAVQFFVQA 236 Query: 181 LDISPDAPWVTEAVVQQYV------------LAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 L ++PD A + A + + A L Sbjct: 237 LRMAPDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKL 296 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 R N+ + + D ++KL D I A + A+ + + +A EK+++ Sbjct: 297 YCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQ 356 Query: 289 VN 290 Sbjct: 357 TE 358 >gi|94310190|ref|YP_583400.1| ParB family protein [Cupriavidus metallidurans CH34] gi|93354042|gb|ABF08131.1| nuclease ParB (CMGI-2) [Cupriavidus metallidurans CH34] Length = 683 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 17/230 (7%) Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 TR + + ++C D A++ + + + +A+ +E + AI Sbjct: 329 ETRLEKIDAELEDACDAEDEAKAEKLEQRRDQVIGELEDAEDALQGYAPEVREVAGAIVT 388 Query: 211 LNQKKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 +++ + R A R+LE +G A + + D++ A+ + + Sbjct: 389 IDRNGEPVIHRGLLREAEAKALRTLEKLRRGFGSTEGEAANDEHEDADDAPKAASLSDRL 448 Query: 270 LISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-----------LKRALRLE 318 + R A + +E +PH +A + ++ LK RLE Sbjct: 449 AQRLSAHRTAALQIEVA--RHPHVALAALVHGMVQTVLQENHYGHDLPLGVSLKLQDRLE 506 Query: 319 EINKESVESLVIVSKIAL---EMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 + + ES V+ L ++ + A+ A+ + E+ LLA Sbjct: 507 GMAPDWPESPAAVALRELQQVAGEALPEDSAELFAALLAKSQDELVRLLA 556 >gi|315051754|ref|XP_003175251.1| heat shock protein STI1 [Arthroderma gypseum CBS 118893] gi|311340566|gb|EFQ99768.1| heat shock protein STI1 [Arthroderma gypseum CBS 118893] Length = 578 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 56/194 (28%), Gaps = 25/194 (12%) Query: 94 SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 ++A LA K+ + + E L A + L T Sbjct: 315 AVAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 E R A+ A K + P+ + + +W A+ Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K A + +R R+ + D E++K I A + A++L + Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470 Query: 273 QNKKRKAEVILEKI 286 + K + + Sbjct: 471 MKEYNKCLDVCTEA 484 >gi|119488020|ref|ZP_01621464.1| hypothetical protein L8106_11502 [Lyngbya sp. PCC 8106] gi|119455309|gb|EAW36448.1| hypothetical protein L8106_11502 [Lyngbya sp. PCC 8106] Length = 727 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 2/161 (1%) Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 A+ + A L++ A +L + G L+ A +AL + PD V Sbjct: 62 QAQGLLDAAIRSYTQALELDPNLPQAHTNLGSMFYKQGLLDQAMTCYRQALSLKPDFAEV 121 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + L K+ + A + ++K + A L + + A G + + Sbjct: 122 YWNL--AQALRKQGNEAEAQICEQKAVEYQPQLATANFLFNQGNKFAYNGKLDQAMKSWQ 179 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++ + N A L + + ++A EK ++ P Sbjct: 180 NAIAIDPNLAEAYCQIGMILRYRGEPKQALSYFEKALELQP 220 >gi|260061693|ref|YP_003194773.1| TPR domain-containing protein [Robiginitalea biformata HTCC2501] gi|88785825|gb|EAR16994.1| TPR domain protein [Robiginitalea biformata HTCC2501] Length = 456 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 52/144 (36%), Gaps = 11/144 (7%) Query: 140 HEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV 199 + E L + + +Y + GD A KA + +A ++ + + Sbjct: 282 RKLFEAQLALEPSASAYLYG-GTLKAKDGDNQGAIADFDKAAGLETNAKKKSDILYKAAT 340 Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIA--RSLENADKGDMI--------ASYHDA 249 +A+++S++ +K +A LLIA + D G + A Sbjct: 341 IARKFSKSQARSYAQKAINAYGANGKAYLLIANLYASSANDCGSTTFEKRAIYWKAADLA 400 Query: 250 IESLKLCDNSIMASICAAKSLISQ 273 ++ ++ + + AA S ++ Sbjct: 401 RQAARVDPSLSSTAKQAAASYSAK 424 >gi|328722692|ref|XP_003247641.1| PREDICTED: tetratricopeptide repeat protein 12-like [Acyrthosiphon pisum] Length = 229 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 4/91 (4%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 + +A+ + NQ + ++ +L R+L + G M D +L L D S Sbjct: 125 RKGNYEKALIYFNQAI----DVRKDSCVLFTNRALTKINLGLMDEVVSDCDRALHLNDRS 180 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVN 290 + A + A++L R AE +LE K + Sbjct: 181 LNAVLYKAEALWELGDTRAAEDLLETALKTH 211 >gi|256221671|ref|NP_001157771.1| plectin isoform 1hij [Rattus norvegicus] gi|256221739|ref|NP_001157774.1| plectin isoform 1hij [Rattus norvegicus] gi|256221753|ref|NP_001157777.1| plectin isoform 1hij [Rattus norvegicus] Length = 4387 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%) Query: 104 RKMHSYVSQQ--HTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVYSL 160 R+ + V Q E L +L + A + + M R + Sbjct: 1243 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLE 1302 Query: 161 YFESCRIGDLNSAQRY---ATKALDISPDAPWVTEAV---VQQYVLAKEWSRAITFLNQK 214 E R G + Q A +A A E + VQ K + A L K Sbjct: 1303 TTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVK 1362 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + RA+ + A++ + +A + Sbjct: 1363 AEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERA 1400 >gi|221123192|ref|XP_002165795.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 887 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 61/159 (38%), Gaps = 7/159 (4%) Query: 236 NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI 295 + ++ D+ + K S I A+ Q KA +LE+ NP ++ Sbjct: 663 HEEEKDLYEAQQAYRNGTKKSPTSFQLWILLARLEEKQGNITKARSVLEQARHRNPRVDL 722 Query: 296 ANIYTHLLSENTVGKLKRALR--LEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 ++ + T G K + + + ++ S + ++ A+ M + Q K++ A+K Sbjct: 723 --LWLESVRIETRGGNKDFAKSLMAKALQDCPSSGQLWAE-AIFMETRPQRKTKSVDALK 779 Query: 354 I-APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + L ++++ + +K W + PD Sbjct: 780 RCEHDPHVLLAVSKLFWSERK-LNKAREWFNRTVKIDPD 817 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 28/213 (13%) Query: 107 HSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES 164 + ++ E L ++ Q+ E+ A + + T L Sbjct: 638 SKALLKESLSKYEDFPKLWMMKGQLHEEEKDLYEAQQAYRNGTKKSPTSFQLWILLARLE 697 Query: 165 CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKE------------------- 203 + G++ A+ +A +P W+ ++ K+ Sbjct: 698 EKQGNITKARSVLEQARHRNPRVDLLWLESVRIETRGGNKDFAKSLMAKALQDCPSSGQL 757 Query: 204 WSRAI---TFLNQKKKNAKEWNR--NRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 W+ AI T +K K+ R + +L+A S + + + ++K+ + Sbjct: 758 WAEAIFMETRPQRKTKSVDALKRCEHDPHVLLAVSKLFWSERKLNKAREWFNRTVKIDPD 817 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 A K ++ + + I+E+ K P Sbjct: 818 FGDAWAYFYKFELAHGTEANQKSIMERCVKSEP 850 >gi|119508836|ref|ZP_01627988.1| hypothetical protein N9414_20690 [Nodularia spumigena CCY9414] gi|119466365|gb|EAW47250.1| hypothetical protein N9414_20690 [Nodularia spumigena CCY9414] Length = 357 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 12/190 (6%) Query: 106 MHSYVSQQHTFHNEYLV---YLLEVQ-----IALAERQYNIAHEKLEMMLQIPATREFAV 157 M + + + + L L E Q + Q A L I T+ Sbjct: 108 MQNRLDLAVAEYKQALTINPKLGEAQYNLGLALHRQGQKEAAIAAYRQALVIDPTKSAGQ 167 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 Y+L +G + +A +A+++ + + AI Q Sbjct: 168 YNLGLGLYELGQIQAAIAAYEEAINLDSSNAKAYFNLAIARQEQGQIELAIAAYEQAL-- 225 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 E + N A A +G + ++++ + A L +Q + + Sbjct: 226 --ELDPNNAAAYNNMGSLKAIQGQTSEAIAVYRQAIRQNPQNTSAYYNLGVILYNQGELK 283 Query: 278 KAEVILEKIW 287 KA IL++ + Sbjct: 284 KANGILKRAY 293 >gi|110631441|gb|ABG81066.1| immunoglobulin A1 protease precursor [Neisseria meningitidis] Length = 1818 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ Sbjct: 1163 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1207 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184 L +Q A + + + E+ R + ++ A KA ++S Sbjct: 1208 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1259 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 A A QQ LA++ A K E R A L + Sbjct: 1260 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1318 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A + + A+ +AK + R+A ++ + H + A Sbjct: 1319 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1370 Query: 303 LSENTVGKLKRALR 316 + + KR Sbjct: 1371 ---SQPQRRKRRAA 1381 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R ++K +A ++A A + ++ + E Q A R++ Sbjct: 1078 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1128 Query: 138 IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190 E E+ + R+ A + R + Q Y A P V Sbjct: 1129 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1183 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + V+ ++A L ++++ R A LL + E + +A+ A Sbjct: 1184 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1232 Query: 251 --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 E+ + AA+ Q +RKA + Sbjct: 1233 AEEAKRQ----------AAELAHRQEAERKAAEL 1256 >gi|21594801|gb|AAH31368.1| Tmtc4 protein [Mus musculus] Length = 524 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 199 VLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + + EW A + AD+G+ A+ E+++L Sbjct: 242 IRSGEWRSEEQLFRSALSVCP----LNAKVHYNIGKNLADQGNQTAAIKYYREAVRLNPK 297 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL 315 + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 298 YVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKRFE 350 >gi|89900507|ref|YP_522978.1| hypothetical protein Rfer_1718 [Rhodoferax ferrireducens T118] gi|89345244|gb|ABD69447.1| Uncharacterized enzyme of heme biosynthesis-like [Rhodoferax ferrireducens T118] Length = 429 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 47/403 (11%), Positives = 107/403 (26%), Gaps = 48/403 (11%) Query: 1 MLRLIRYFFVISLVICSFIIVSHYPEDVSITWGNRLYRTSPFVILSILYFFLFAWILLFA 60 M + + + + + + V + ++I W S +++ +L F + Sbjct: 1 MRAALWFLGLFGVAVAMALFVGNNQGTITIFWPPYRVDLSFNLVVLLLALFFLGLHVALR 60 Query: 61 VSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQH------ 114 + P + + AL L + A ARK V + Sbjct: 61 ALAALFAMPGHARSWRIQHQERAMHVALLDALSHMMAGRFIRARKAAEVVLARESAMTRS 120 Query: 115 ------TFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 + L +LL + A + + + L L+ + R+ + R G Sbjct: 121 GETLAYSARLRALSHLLAAESAQSLQDKVAREDHLRQSLEQASRRDA-------QETREG 173 Query: 169 DLNSAQRYATKALDISPDAPWVTE-------------AVVQQYVLAKEWSRAITFLNQKK 215 A R+A + D W+ + +Q +A++ A+ Sbjct: 174 VQLRAARWALEDHDAQSALQWLNDLPQGASRRTLALRLRLQAARMARQTQLALETARLLA 233 Query: 216 KNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA--KSLISQ 273 K+ + +L + +L+ L + + A + L Sbjct: 234 KHRAFSDVAAPGILRSLALDLVLTAYDPDQLQTVWRQLDEAERLMPEVAIEASSRMLKVG 293 Query: 274 NKKRKAEVILEKIWK---VNPH-----------PEIANIYTHLLSENTVGKLKRALRLEE 319 A L +W P + + + L R + + Sbjct: 294 GDIELARNWLLPVWDHMLAQPGALTEAQRISLIRALESSFAMASGAPEAPWLTRIEQAQL 353 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 + + + + +A A+ + Sbjct: 354 ADPADANLQYLAGMTCMRLQLWGKAQQLLQHALPKLQDAGLAR 396 >gi|218767823|ref|YP_002342335.1| IgA1 protease [Neisseria meningitidis Z2491] gi|121051831|emb|CAM08137.1| IgA1 protease [Neisseria meningitidis Z2491] Length = 1773 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ Sbjct: 1152 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1196 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184 L +Q A + + + E+ R + ++ A KA ++S Sbjct: 1197 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1248 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 A A QQ LA++ A K E R A L + Sbjct: 1249 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1307 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A + + A+ +AK + R+A ++ + H + A Sbjct: 1308 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1359 Query: 303 LSENTVGKLKRALR 316 + + KR Sbjct: 1360 ---SQPQRRKRRAA 1370 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R ++K +A ++A A + ++ + E Q A R++ Sbjct: 1067 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1117 Query: 138 IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190 E E+ + R+ A + R + Q Y A P V Sbjct: 1118 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1172 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + V+ ++A L ++++ R A LL + E + +A+ A Sbjct: 1173 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1221 Query: 251 --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 E+ + AA+ Q +RKA + Sbjct: 1222 AEEAKRQ----------AAELAHRQEAERKAAEL 1245 >gi|326473191|gb|EGD97200.1| heat shock protein [Trichophyton tonsurans CBS 112818] Length = 582 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%) Query: 94 SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +IA LA K+ + + E L A + L T Sbjct: 315 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 E R A+ A K + P+ + + +W A+ Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K A + +R R+ + D E++K I A + A++L + Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470 Query: 273 QNKKRKAEVILEKI 286 + K + + Sbjct: 471 MKEYNKCLDVCTEA 484 >gi|317403788|gb|EFV84268.1| hypothetical protein HMPREF0005_03694 [Achromobacter xylosoxidans C54] Length = 1135 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 11/139 (7%) Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A ++ + A+ L L + I A L + +A + + ++ Sbjct: 594 ALAVSLFSTFRSPEALQPALTMLDLAPADSQSHIVLAAILAQLGRTSEAIAVGRRAVELG 653 Query: 291 P-----HPEIANIYTHLLSENTVGKLKRALRLEEIN--KESVESLVIVSKIALEMGSIDQ 343 P H +A+ A L I + ++ + + K ++ G + Sbjct: 654 PRNAEAHAILADALAAERRHKEAQ----ASNLTAIALDPKQRKARINLCKAYIDAGEVSL 709 Query: 344 AHAKAMLAMKIAPRKEIFL 362 A A A+ I P I Sbjct: 710 AEQAAREAVAIFPTDAIVR 728 >gi|224130012|ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1| predicted protein [Populus trichocarpa] Length = 407 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 18/159 (11%) Query: 134 RQYNIAHEKLEMMLQIPATREFAV------YSLYFES-CRIGDLNSAQRYATKALDISPD 186 +A E E + + Y + R G + + Sbjct: 217 GNLTLAEETFEEL------KLLGQPLDRRSYGSMIMAYIRAGMPEKGEMILREMDAQEIR 270 Query: 187 A-PWVTEAVVQQYVLAKEWSRAITFLNQKKKNA-KEWNRNRAILLIARSLENADKGDMIA 244 A V +A+++ Y + + A + + +R A+LL A + + Sbjct: 271 AGSEVYKALLRAYSIIGDADGAQRVFDAIQLAGIPPDDRTCAVLLNAYGMAGQSQNAYAT 330 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + ++ D + A + AA +NK +A L Sbjct: 331 FENMWRAGIEPTDRCV-ALVLAA--YEKENKLNQALDFL 366 >gi|188579255|ref|YP_001916184.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523707|gb|ACD61652.1| polysaccharide deacetylase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 898 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 +R RA L R L+ + + E+LKL + +A+ Q + ++ Sbjct: 782 DRQRAQLANERGLQLYKEKRYADAAEQFAEALKLRADFALAANNLGFVYFRQGRFAESAR 841 Query: 282 ILEKIWKVNPHPE-----IANIYTH 301 LE K++P + + Y Sbjct: 842 WLETTLKIDPSRAVAYLNLGDAYAE 866 >gi|171913224|ref|ZP_02928694.1| hypothetical protein VspiD_18630 [Verrucomicrobium spinosum DSM 4136] Length = 1447 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 76/208 (36%), Gaps = 11/208 (5%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + +A++ P P V + ++ + + A+ +L + + R +L R Sbjct: 335 ALQVLREAMEALPGTPQVEQRLLDLWEKEGTDAAALQWLEKLMAAHPD--RQDLLLRQVR 392 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 L + G + S + + S+ ++ L +N+ + A ++LE +P Sbjct: 393 WLFANNLGPRAHEAFKTLLSRLEMADQVGRSVELSRWLRRRNQLQDAGLLLETALGKSPD 452 Query: 292 ----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 E+ +Y + V L + + + + + +++ + A Sbjct: 453 RWDLRRELGELYFTQRRTDEVAALFEGDWTKTLTPD---ARLEIAQFLMSKQLWVNAKKL 509 Query: 348 AMLAMKIAPRK-EIFLLLAQIEQANSHN 374 + P E LLLA+IE+ + Sbjct: 510 VEPWLVAQPTAFEGHLLLAKIEEKLGDD 537 >gi|163733535|ref|ZP_02140978.1| TPR domain protein [Roseobacter litoralis Och 149] gi|161393323|gb|EDQ17649.1| TPR domain protein [Roseobacter litoralis Och 149] Length = 270 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 32/108 (29%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 N A + LQ R L R A K ++ + Sbjct: 39 DPNEAISYYQRTLQSSPDRIDLRRGLAASFVRAKRFTEAASAWEKVTELKDSTSEDSVNY 98 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + + +W +A L+ + + R R ++A + E K D Sbjct: 99 ADALIRSGDWDKAEKVLDTVPPTYETFKRYRLEAMMADANEEWKKADS 146 >gi|42524506|ref|NP_969886.1| hypothetical protein Bd3119 [Bdellovibrio bacteriovorus HD100] gi|39576715|emb|CAE80879.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 590 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 44/155 (28%), Gaps = 14/155 (9%) Query: 146 MLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVT---EAVV---Q 196 + Q + L ++ R +G + +A + V+ Sbjct: 182 LSQKDKNKSLGYEELMSQALRYKSLGLYERSLESYQRASKLKEPDAEAQVQMATVLISED 241 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLC 256 + L L + + ++ GD+ + +++ Sbjct: 242 RQSLMG-----RRILERALVQENRSRSEIVDAYLGIAVSYMMDGDLKQAEDTLQKAIGHE 296 Query: 257 DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 +I A + A + + +A + I++ NP Sbjct: 297 PFNISALLNLAIIQLKKGNYGEAMRDFDAIYRKNP 331 >gi|116620339|ref|YP_822495.1| TPR repeat-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116223501|gb|ABJ82210.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter usitatus Ellin6076] Length = 761 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 57/180 (31%), Gaps = 6/180 (3%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 + + V + + +Y A L + + L + Sbjct: 468 ERLIPGDAEVQFQLATTKVKQGKYREAEGLLRSLNSKAPGDARILRELAGALTAQNQQPA 527 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A + L+ P+A V E + + + + + AI + + R L + Sbjct: 528 ALAMLQEELNRHPEADSVRELLGETSLESGHYDVAIEQAGRLLSKYPDSAR----LHLLV 583 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291 KGD+ + + L + A++ A A + Q + +A + K+NP Sbjct: 584 GKAYFRKGDLAGATRAYQRASVLRPS-DPAAVNALASTYAVQGQASQAMEAYRHVLKLNP 642 Score = 36.8 bits (84), Expect = 9.0, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 22/282 (7%) Query: 86 KALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM 145 +A+ L+ LA + + + A A E E Sbjct: 340 RAVKASLLMARGGKENLAAAASEFRDLMRKDPGNATWHFNLGRALAAVGDSGAAGEFQEA 399 Query: 146 MLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 + +L S G+ RYA + L I+P V +++ L Sbjct: 400 VRLRAD--FIPPRIALAELSRINGNYQQVLRYADEVLAIAPGLSSVH--LLRSMALMG-- 453 Query: 205 SRAITFLNQKKKNAKEWNRN---RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + + + + R A + + +G + Sbjct: 454 ---LDRSGEAQSELRLLERLIPGDAEVQFQLATTKVKQGKYREAEGLLRSLNSKAPGDAR 510 Query: 262 ASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVG------KLKRAL 315 A +L +QN++ A +L++ ++N HPE A+ LL E ++ +++A Sbjct: 511 ILRELAGALTAQNQQPAALAMLQE--ELNRHPE-ADSVRELLGETSLESGHYDVAIEQAG 567 Query: 316 RLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 RL +S ++V K G + A A + P Sbjct: 568 RLLSKYPDSARLHLLVGKAYFRKGDLAGATRAYQRASVLRPS 609 >gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657 [Trichodesmium erythraeum IMS101] gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101] Length = 594 Score = 39.9 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 23/163 (14%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQRYATKALDI 183 Q + + + A + L I V+ + E + D A +A+ + Sbjct: 424 GQAFFMQGKLDEAIHAYKKALGIAP-NFTIVHNKLGVALEQQKKEDEAVAAY--KEAISL 480 Query: 184 SPDAPWVTEAVVQQYVLAKE--------WSRAITFLNQKKKNAKEWN------RNRAILL 229 P+ A + +L ++ +A + ++ + + + Sbjct: 481 DPNFA-TARANLGYALLKQDRTTDGIANLKKARDLFQTQNQDKEASKIDNFLCKRESESH 539 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMA--SICAAKSL 270 + + + +G + + E+++L + A S+ AAK+L Sbjct: 540 YRKGEKLSKQGKYQEAIAEYEEAIRLDPSHEDARQSLTAAKAL 582 >gi|254422317|ref|ZP_05036035.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] gi|196189806|gb|EDX84770.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC 7335] Length = 987 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 22/180 (12%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI-----------ASY 246 + ++ A +LN+ ++ R AI R+L+ ++ Sbjct: 785 QAIEQDPIDARVWLNKGMTLSRLRKREEAIAAFDRALDINPDYHEAWVNRGVAFGILQAH 844 Query: 247 HDAIESLKLCDNSIMASICA----AKSLISQNKKRKAEVILEKIWKVNPHPEIANI---- 298 A ES + A +L + +A EK + N P++A Sbjct: 845 DKAFESFDMAVTLQANDAVAWLNRGLALTELERYEEAVASFEKATRFN--PKLAKAWDNR 902 Query: 299 -YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 Y + + LK + +N ++ + D A A+++ P Sbjct: 903 GYVLMRLGRDLDALKSFDKAIAVNPNYAKAYYNRALCYALQRDNDLALENLQQAVRLEPS 962 >gi|119478052|ref|ZP_01618131.1| TPR repeat protein [marine gamma proteobacterium HTCC2143] gi|119448758|gb|EAW30001.1| TPR repeat protein [marine gamma proteobacterium HTCC2143] Length = 899 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 14/197 (7%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPA 151 + IAA N A ++ + + L L+ ++ ++Q+ A L+ P Sbjct: 689 IEIAAGNYSEALQVTEQIRA--LVPDSPLADYLKGRVYATQQQWPEAIADLQLAWQIQPN 746 Query: 152 TREFA-VYSLYFESCRIGD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAIT 209 +Y + D + AQ + + + P +P Q AI Sbjct: 747 NSIAGALYG----ALTANDNTDKAQLFVDEWQRLIPQSPNPLIIKATQQQQQGNAIAAIE 802 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + + N AI L + + G+ + A ++ +L NS Sbjct: 803 LYEKAIGLSP----NNAIALNNLAWLYFENGNS-KARELAEKAYQLAPNSAGILDTYGWI 857 Query: 270 LISQNKKRKAEVILEKI 286 L+++ + +L+K Sbjct: 858 LVNEGSVAEGIELLQKA 874 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 19/215 (8%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MM 146 L + + +I A+K S + + ++E L L Q A E + A L + Sbjct: 191 LSLARIDLITGDIASAKKSLSQLLVNNGQNSELLH--LRAQAAYIENNLDDAERFLTDAL 248 Query: 147 LQIPATREFA------VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYV- 199 +P T + L + G + A Y + +P+ + + Q Sbjct: 249 SYLPQTDIITPMKTRVLQQLSETLTQQGRTSEAMIYTRLLAEANPEGHQAKQTLNQAMSL 308 Query: 200 -LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A + +A L + + + +L + N +GDM + +++ Sbjct: 309 YQAGDLDQAEQLLLKLYEQYPNNTVSGMML----GMINYQQGDMTKAGELLEQNI--DPE 362 Query: 259 SIMASIC--AAKSLISQNKKRKAEVILEKIWKVNP 291 +++ AA + + + KA +L+ K P Sbjct: 363 IASSNVISSAAMAQLRLGQSDKAIALLQAALKTQP 397 Score = 36.5 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 19/207 (9%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 L + D+ A+ KAL+IS D + +V + A +S A+ Q Sbjct: 650 RGLSRQLAAADDMTQAKSALLKALNISSDNTSLLTDLVTIEIAAGNYSEALQVTEQ---- 705 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHD--AIESLKLCDNSIMASICAAKSLIS--Q 273 RA++ + + AI L+L + A + Sbjct: 706 ------IRALVPDSPLADYLKGRVYATQQQWPEAIADLQLAWQIQPNNSIAGALYGALTA 759 Query: 274 NKKRKAEVILEKIWK----VNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLV 329 N + W+ +P+P I N + ++ + ++ + +L Sbjct: 760 NDNTDKAQLFVDEWQRLIPQSPNPLIIKATQQQQQGNAIAAIELYEKAIGLSPNNAIALN 819 Query: 330 IVSKIALEMGSIDQAHAKAMLAMKIAP 356 ++ + E G+ +A A A ++AP Sbjct: 820 NLAWLYFENGN-SKARELAEKAYQLAP 845 >gi|37520953|ref|NP_924330.1| hypothetical protein gll1384 [Gloeobacter violaceus PCC 7421] gi|35211948|dbj|BAC89325.1| gll1384 [Gloeobacter violaceus PCC 7421] Length = 631 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 41/141 (29%), Gaps = 7/141 (4%) Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 A R + + + + +++L + A L SQ + + A Sbjct: 16 TVEDARTACGRGEQLRKQNQLTEAIGCFRRAVRLEPGLVEAHFGLGVVLASQGQLQAAAA 75 Query: 282 ILEKIWKVNPHPEIANIY-----THLLSENTVGKLKRALRLEEINKESVESLVIVSKIAL 336 E+ ++ P+ A + + I + + + + + + Sbjct: 76 SFEQALRLQ--PDFAEASFQLAVAYARLGAPGRAAAAFQQTLAIRHDHTGAHLELGHLLM 133 Query: 337 EMGSIDQAHAKAMLAMKIAPR 357 G +A A+ I P Sbjct: 134 AQGDWQRAAGCYRQALAIDPD 154 Score = 37.2 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 8/155 (5%) Query: 148 QIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRA 207 + R + + L A +A+ + P + + A Sbjct: 16 TVEDARTACGRG--EQLRKQNQLTEAIGCFRRAVRLEPGLVEAHFGLGVVLASQGQLQAA 73 Query: 208 ITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAA 267 Q + ++ A ++ A G + ++L + + A + Sbjct: 74 AASFEQALRLQPDF----AEASFQLAVAYARLGAPGRAAAAFQQTLAIRHDHTGAHLELG 129 Query: 268 KSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 L++Q ++A + ++ P++A + L Sbjct: 130 HLLMAQGDWQRAAGCYRQALAID--PDLATAHFRL 162 >gi|296123820|ref|YP_003631598.1| hypothetical protein Plim_3586 [Planctomyces limnophilus DSM 3776] gi|296016160|gb|ADG69399.1| Tetratricopeptide TPR_2 repeat protein [Planctomyces limnophilus DSM 3776] Length = 1077 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 45/299 (15%) Query: 76 LHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAE 133 + + AL GL A A + + + + L Q A A Sbjct: 549 FPQATQRRRAYAL-QGLAYAKAQQWAKAEAVIKQFEAE-FPGDPAVAAALMDQAEVAEAA 606 Query: 134 RQYNIAHEKLEMMLQIPAT---REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 +Q+ +A E + ++ A FA + R+GD A + P P Sbjct: 607 KQWPVALADFEKLKRLAAGTTNEPFAWRGTGWSRFRLGDYKLAAEEFAQLSAKFPQHPLQ 666 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 EA+ Y + W A +A+ + ++ + D + + Sbjct: 667 AEAM---YYEGESWLLAKET-------------EKALKVFQQAFDRFTPKDAASVKEELK 710 Query: 251 ESLKLCDNSI--MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT- 307 + + A++L + +A+ E + K P A ++ LL+E Sbjct: 711 -----APVLFGYRSGLMMARTLEQTGRLEQADQAYETLLKKFPK---AEVFDQLLNEWAL 762 Query: 308 ----VGKLKRALRL-EEINKESVESLVI------VSKIALEMGSIDQAHAKAMLAMKIA 355 G+ ++A ++ + E ES + +++ L G +A ++ Sbjct: 763 INYEAGRFEQADKIFARLVAECPESPLADNAKLSLAESDLIQGEFARARKSLEELLESE 821 >gi|291393188|ref|XP_002713058.1| PREDICTED: transmembrane and tetratricopeptide repeat containing 4 [Oryctolagus cuniculus] Length = 742 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 8/123 (6%) Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 V++ + EW A + ADKG+ A+ E++ Sbjct: 455 VLRCVTRSSEWRSEDQLFGSALSVCP----LNAKVHYNIGKNLADKGNQTAAIRYYREAV 510 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR 313 +L + A L +N+ ++AE +L ++ P+ A + +L LKR Sbjct: 511 RLNPKYVHAMNNLGNILKERNELQEAEELLSLAVQIQ--PDFAAAWMNL--GIVQNSLKR 566 Query: 314 ALR 316 Sbjct: 567 FEA 569 >gi|290488982|gb|ADD30875.1| putative RF3 protein [Plumbago auriculata] Length = 171 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 10/108 (9%) Query: 117 HNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQ--IPATREFAVYSLYFESCRIGDLNSA 173 E Y + A +E Y A E M P R + +Y++ GD A Sbjct: 32 EKEAFTYYRDGMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKA 91 Query: 174 QRYATKALDISPDAPWVTE--AVV-----QQYVLAKEWSRAITFLNQK 214 Y +AL+ +P P AV+ +Q + + A + +Q Sbjct: 92 LEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQA 139 >gi|224370267|ref|YP_002604431.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2] gi|223692984|gb|ACN16267.1| TPR domain family protein [Desulfobacterium autotrophicum HRM2] Length = 489 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 4/139 (2%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 L++ ++A Q + L ML+ Y L R L+ A + +AL Sbjct: 266 NLVKYRLAGLYGQVDTTEAMLSKMLKKDPDDAAIHYGLALVLVRKSLLDQALSHLGQALT 325 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 + P+V + + Y+L E +A+ L R+ LL R D G + Sbjct: 326 LRLFDPFVLVEMGRVYLLKGEPEKALAVLEG----LDTVADVRSSLLFYRGSARLDLGML 381 Query: 243 IASYHDAIESLKLCDNSIM 261 + D + + + Sbjct: 382 DKAKSDLLRLVDADPDLFP 400 >gi|254465675|ref|ZP_05079086.1| TPR/sulfotransferase domain protein [Rhodobacterales bacterium Y4I] gi|206686583|gb|EDZ47065.1| TPR/sulfotransferase domain protein [Rhodobacterales bacterium Y4I] Length = 582 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 75/226 (33%), Gaps = 16/226 (7%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A Y KAL ++P + + Q + ++ A+ L + K+ L + Sbjct: 56 AVPYFKKALALAPGFHDARKNLAQTLLFLQQGEPAMKLLERVLKDQP----GDQAALYLQ 111 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 + + A+ A +L A + + ++ + KVNP+ Sbjct: 112 AQAHLVMNAPEAAIETATAALDRDPRQPRMLRLRATAWNTLGDEKATLADYQAALKVNPN 171 Query: 293 PEIANIYTHLLSENTVGKLKR-------ALRLEEINKESVESLVIVSKIALEMGSIDQAH 345 A LL + +L R A + + ++ E+ ++ + G A Sbjct: 172 DADALQNASLL----LARLMRQDEATEAAEKAVAVAPQNAEARRRLASQLISNGETAAAR 227 Query: 346 AKAMLAMKIAP-RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 + + M++ P ++ +LA+I + + A Sbjct: 228 EQCLALMELDPKDTQVLEMLARISNREQNAELLPIAQKALKSAAPR 273 >gi|254439763|ref|ZP_05053257.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus 307] gi|198255209|gb|EDY79523.1| tetratricopeptide repeat domain protein [Octadecabacter antarcticus 307] Length = 551 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 90/319 (28%), Gaps = 86/319 (26%) Query: 125 LEVQIALAERQYNIAHEKLE----------MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 L + A Y A +++ T V G + SA Sbjct: 13 LAARQAAISGDYAAAAIYFRDALLADANNTALMEQSLTAFLGV----------GQVESAA 62 Query: 175 RYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-RAILLIA-- 231 A ++ ++ A++ Q A++W L + + +A + Sbjct: 63 GIARPFINAGGESQIANIALMAQAARAQDWDTIFDLLEAGHEVGPLLDGLVQAWAYLGNG 122 Query: 232 ---RSLENADK----------GDMIASYHDAIE-------SLKLCD---NSIM--ASICA 266 ++ D+ G + A+ ++ + AS+ A Sbjct: 123 DKDGAMMRFDEVVDTPGLRGFGQQHKALALAMSGDLGGANAIYDLPPNIGIVPTRASVVA 182 Query: 267 -AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKR------------ 313 + L + +A I+E+ + +P PE+ + + +++ L R Sbjct: 183 HLQILAQLGEFERAGDIIERAFGEDPDPELVALRSAIMAGAVPD-LSRVVATPSDGIAYA 241 Query: 314 --------------------ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK 353 A I ++ + +++ +G D A + Sbjct: 242 YKGLSEILQGEANESYLLLYAQAARFIAPHDADAQIATARLQNALGQYDAAAQTFAQVVT 301 Query: 354 IAPRKEIFLLLAQIEQANS 372 P A+I +A S Sbjct: 302 DDPAFHS----AEIGRAES 316 >gi|187775826|ref|ZP_02798537.2| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4196] gi|188024725|ref|ZP_02773408.2| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4113] gi|189009920|ref|ZP_02803528.2| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4076] gi|208812629|ref|ZP_03253958.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4045] gi|208819854|ref|ZP_03260174.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4042] gi|187770658|gb|EDU34502.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4196] gi|188017138|gb|EDU55260.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4113] gi|189003159|gb|EDU72145.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4076] gi|208733906|gb|EDZ82593.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4045] gi|208739977|gb|EDZ87659.1| tetratricopeptide repeat protein [Escherichia coli O157:H7 str. EC4042] gi|320188889|gb|EFW63548.1| hypothetical protein ECoD_03882 [Escherichia coli O157:H7 str. EC1212] Length = 1068 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 493 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 552 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 553 LAARNGNFDAGLDFCQQSLRACPINQEVLCLHNLLLVLSGRQDNARLQREKLLRD 607 >gi|21240988|ref|NP_640570.1| porphyrin biosynthesis protein [Xanthomonas axonopodis pv. citri str. 306] gi|21106275|gb|AAM35106.1| porphyrin biosynthesis protein [Xanthomonas axonopodis pv. citri str. 306] Length = 421 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 107/361 (29%), Gaps = 31/361 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G Y + L IL L LL+ Sbjct: 7 VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K +KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYFE----SCRIGDLNS 172 L V++A A A + + + T L + + D + Sbjct: 120 ALAS--AVRVADARGDDAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINAVDSAN 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ + L + A A L ++ A + L Sbjct: 178 AQPLPARGLLLRTHA----------LAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATL 227 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291 + + + + + E+L + A + A A+ + A LE Sbjct: 228 AEQTLLQASDANALAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEHALDAQW 287 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +Y L E + A R +S L+ ++++A + QA A Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARQQQQWSQAEEFLHRA 347 Query: 352 M 352 + Sbjct: 348 I 348 >gi|319442373|ref|ZP_07991529.1| serine/threonine protein kinase, bacterial [Corynebacterium variabile DSM 44702] Length = 815 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 86/241 (35%), Gaps = 46/241 (19%) Query: 164 SCRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + GD +AQRY L+I P AP + A + +L ++ I L+ Sbjct: 557 ALLTGDFVAAQRYFNTVLNILPGEPAPKLALAATDELLLQEQGVNTIGLLDAGI------ 610 Query: 222 NRNRAILLIARSLENADK-----------GDMIASYHDAIESLKLC----DNSIMASICA 266 R A+ L + N D+ D +A A+ L ++ ++ Sbjct: 611 -RRSAMALTYQQGLNLDEVAVVPGWTHLTQDPVALRFHALRLYGLVWSTNPTTVSSAFGM 669 Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIAN-----IYTHLLSENTVGKLKRALR----L 317 A+ L ++ A L+K+ + H EIA ++ ++ + +++RA R L Sbjct: 670 ARQLQAEGMVDPAVATLDKVPANSRHHEIARMTTVLMFITDRADLSESRIRRAGRRLDLL 729 Query: 318 EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP--------RKEIFLLLAQIEQ 369 + + V AL+ + +A + I P + A +E+ Sbjct: 730 PTTEPRIPQLRIAVLSAALD---WLRDSEEAGSPVHIGPGQLFDVDFTERGLR--AGLER 784 Query: 370 A 370 Sbjct: 785 G 785 >gi|303237007|ref|ZP_07323579.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN] gi|302482787|gb|EFL45810.1| tetratricopeptide repeat protein [Prevotella disiens FB035-09AN] Length = 294 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Query: 305 ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMK-IAPRKEIFLL 363 + V + A + +N++ ++ ++ + L M +++A A ++ +++ LL Sbjct: 142 GDDVNTIAMATKAISLNEKYGDAYLLRGETHLRMEQLEEATTDADWLVEHTDNNEDVLLL 201 Query: 364 LAQIEQANSHNTDKILYWTQSALHAMP 390 A+IE+A + N + I W A+ A P Sbjct: 202 KARIERAATRNDESI-AWFTKAIDANP 227 >gi|302652782|ref|XP_003018233.1| hypothetical protein TRV_07754 [Trichophyton verrucosum HKI 0517] gi|291181854|gb|EFE37588.1| hypothetical protein TRV_07754 [Trichophyton verrucosum HKI 0517] Length = 578 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 25/194 (12%) Query: 94 SIAAHNIPLAR-KMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT 152 +IA LA K+ + + E L A + L T Sbjct: 315 AIAEGREMLADFKIIAKAFGRIGSSYEKL------------GDLATAITNYQKSLTEHRT 362 Query: 153 REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 E R A+ A K + P+ + + +W A+ Sbjct: 363 PEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARELGNKKFKEADWPGAVEAYT 414 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 + K A + +R R+ + D E++K I A + A++L + Sbjct: 415 EMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAIKRDPKFIRAYLRKAQALFA 470 Query: 273 QNKKRKAEVILEKI 286 + K + + Sbjct: 471 MKEYNKCLDVCTEA 484 >gi|218509623|ref|ZP_03507501.1| probable O-linked GlcNAc transferase protein [Rhizobium etli Brasil 5] Length = 316 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 11/149 (7%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q A ++ A + L R + L ++ D A +KA+ ++P Sbjct: 179 AGQDDQAFNDFDRAIQ-----LGTTDGRAYHNRGLIYQKRNQQD--KAIDDFSKAISLAP 231 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 ++P Y+ + A N +A E N N A ++L +GD + Sbjct: 232 NSPEPYNGRGISYIALNDDDNAFADFN----HAIELNGNIAESWANQALVYERRGDKAKA 287 Query: 246 YHDAIESLKLCDNSIMASICAAKSLISQN 274 ++ L A A+ S Sbjct: 288 ARSYRHAVGLDPKYQPARDGLARVGASAG 316 >gi|242281120|ref|YP_002993249.1| hypothetical protein Desal_3664 [Desulfovibrio salexigens DSM 2638] gi|242124014|gb|ACS81710.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio salexigens DSM 2638] Length = 583 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 86/279 (30%), Gaps = 33/279 (11%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATR---------EFAVYSLYFESCRIGDLNSAQRYA 177 +I L + ++ A + L+++ + T + L ++ R Sbjct: 175 ARIYLEQNKFAQALDILKVIPKDKRTAQIHYLHAKSSAGL-GLTRQAIRS---------L 224 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 KA+++ PD + + L K++ A + + N R L+ Sbjct: 225 RKAVEVKPDFIEAWGELAYMHELEKDYDSAEQIYTKMLEFPDVSNHIRLRLMEL----CL 280 Query: 238 DKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIA 296 + + AIE + A + A L K IL ++ P+ Sbjct: 281 KLNNPERALKLAIEGPRSK-----AFLLEAAQLFISGKFYGQASILLDLFAQQKSIPDSY 335 Query: 297 NIY-THLLSENTVGKLKRALRLEEINK---ESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 + + E K L +I+ SL + + +++ +A + Sbjct: 336 YFFKASIAFEGEDDPGKALGYLNKISPQSEHYDRSLQFRAHLLMDLKRNKEALEIIRIGE 395 Query: 353 KIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + P + F LL + + ++ +P Sbjct: 396 EKFPEEANFYLLEAGLHSEAGDSKAAKDALLRGNTNIPG 434 >gi|167582750|ref|ZP_02375624.1| TPR domain protein [Burkholderia thailandensis TXDOH] Length = 781 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 6/144 (4%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY--SLYFES 164 S ++ + +L V + ++ A + ++++ A L + Sbjct: 235 ASASRALELLPDDLVTRILLVDVLRITKRLPEAETQSRRLIEMKPDNAEAHRMLGLVLHA 294 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R A +A++++P+A + + AI L + + + Sbjct: 295 QRR--YEEAVAVCRRAVELAPNAAPANGTLGVVLLEQGNVHEAIGRLRRAVEIDPTDSVT 352 Query: 225 RAILLIARSLENADKGDMIASYHD 248 + +L +L + D D + Sbjct: 353 HSAMLF--ALVHDDAVDPAQLLEE 374 >gi|145542869|ref|XP_001457121.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424936|emb|CAK89724.1| unnamed protein product [Paramecium tetraurelia] Length = 846 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 4/143 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + + + A + L+ A+ L + N A K I P+ P + Sbjct: 83 QNKLDKAKKYFLTSLEKQPNHALALNELASLMIKEKQYNEALLNLEKGFQIDPNIPDLNY 142 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + K + AI + + K N+ ++++ +D + + Sbjct: 143 GLGYVLARLKRKTEAIQYFDMAIKQDP----NQKHFYVSKATTLSDLKQFDKALEAVQIA 198 Query: 253 LKLCDNSIMASICAAKSLISQNK 275 LK+ I A Q + Sbjct: 199 LKIDPQYIDGYQVLAYIYRHQKQ 221 >gi|157112300|ref|XP_001657484.1| smile protein [Aedes aegypti] gi|108883757|gb|EAT47982.1| smile protein [Aedes aegypti] Length = 707 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 84/234 (35%), Gaps = 19/234 (8%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV--- 190 + A E E L +T Y+L G + A Y KAL+ P+ Sbjct: 250 NRTKEAQEVYERALLYDSTNPDIYYNLGVVFLEQGKASQALAYLDKALEFDPEHEQALLN 309 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + ++Q+ + A L K E N + + D + + + Sbjct: 310 SAILLQELGRPELRKIARERL-LKLLAKDESNER---VHFNLGMLAMDDRNTDEAENWFR 365 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE-------IANIYT-HL 302 ++ L + A A L ++ +A L + V HP+ + +IY ++ Sbjct: 366 RAVHLKQDFRSALFNLALLLADDHRPLEAAPFLNQ--LVKYHPDHIKGLILLGDIYINNI 423 Query: 303 LSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + R+ +++ +++ L + + +E G + QA A A ++AP Sbjct: 424 KDLDAAENC--YKRILQLDPVNIQGLHNLCVVYVERGKLAQAQACLSHAHQLAP 475 >gi|294643797|ref|ZP_06721595.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294808457|ref|ZP_06767210.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] gi|292640886|gb|EFF59106.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a] gi|294444385|gb|EFG13099.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC 1b] Length = 651 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189 + Y+ A E LE +L++ TR + + S + D +A KAL++ P W Sbjct: 113 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 170 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+V+ +++ A N+ + A I R+L + ++ + D Sbjct: 171 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 224 Query: 250 IESLKLCDN 258 +L + N Sbjct: 225 DLALDIDPN 233 >gi|213619379|ref|ZP_03373205.1| hypothetical protein SentesTyp_24180 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 307 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 13/162 (8%) Query: 134 RQYNIAHEKLEMMLQIP----ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + + A + +++ R AV L + G + A + D Sbjct: 83 GEVDRAIRIHQTLMESASLTYEQRLLAVQQLGRDYMAAGLYDR----AEDMFNQLTDETE 138 Query: 190 ----VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR-AILLIARSLENADKGDMIA 244 + ++Q Y L +W +AI + K K+ R A +L+ DM Sbjct: 139 FRVGALQQLLQIYQLTSDWQKAIEVAERLVKLGKDKQRIEIAHFYCELALQQMGNDDMDR 198 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + + NS SI + +++ KA L+++ Sbjct: 199 AMALLKKGAAADKNSARVSIMMGRVYMARGDYAKAVESLQRV 240 >gi|195471794|ref|XP_002088187.1| GE13868 [Drosophila yakuba] gi|257096370|sp|B4P0E1|FICD_DROYA RecName: Full=Adenosine monophosphate-protein transferase FICD homolog gi|194174288|gb|EDW87899.1| GE13868 [Drosophila yakuba] Length = 495 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 11/140 (7%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE-MMLQIPATREFAVY-SLYFES 164 SY + T NE LV L Q + + A E + P E + + E Sbjct: 108 ASYTKDEQTSINEALVSLRMAQDMYLAGKDDKASRLFEHALALAPRHPEVLLRYGEFLEH 167 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + + + Q Y AL ISP + + + L++++ + + R Sbjct: 168 SQRNIVLADQYYFQ-ALTISPSNSEA-------LANRQRTADVVQTLDERRLQSLDSKR- 218 Query: 225 RAILLIARSLENADKGDMIA 244 A+ I S + A Sbjct: 219 DALSAIHESNGALRRAKKEA 238 >gi|157273540|gb|ABV27439.1| probable soluble lytic transglycosylase [Candidatus Chloracidobacterium thermophilum] Length = 801 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 75/251 (29%), Gaps = 39/251 (15%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL------YFESCRIGDLNSAQRYAT 178 L ++ A E ++Q P + FA Y L + + G+ + Q Sbjct: 95 LRARLLHRTGDLAGARTMYEQVMQRPGGQMFAPYCLKYLAELARQEAQSGNQAACQEEQR 154 Query: 179 KA------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 + P A + + + Y A + RAI Q ++E+ +LL Sbjct: 155 RLTELTQRFGAHPAARGARQRLAESYAAAGDLDRAIAVYRQLASQSREYEARLGVLLRRV 214 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR--KAEVILEKIWKVN 290 E + + A++ AA+ L +Q A+ ++ Sbjct: 215 GQEAEAQILFRRLLASGKDD---------AALLAAEQLDAQEDSSLLPAQRLVR------ 259 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINK---ESVESLVIVSKIALEMGSIDQAHAK 347 A +Y + L E + E+L + + + D+A Sbjct: 260 -----ARLYLANRHTEGAKR--HFRALVEHVPPVAQRAEALWSLGRAFFIEENWDEAVRW 312 Query: 348 AMLAMKIAPRK 358 A + P Sbjct: 313 FDRAHREYPTS 323 Score = 37.2 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 93/315 (29%), Gaps = 33/315 (10%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ-IPAT- 152 +A+ A + Q L+ ++ LA R A +++ +P Sbjct: 228 LASGKDDAALLAAEQLDAQEDSSLLPAQRLVRARLYLANRHTEGAKRHFRALVEHVPPVA 287 Query: 153 -REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAI 208 R A++SL + + A R+ +A P +P + Q A + A+ Sbjct: 288 QRAEALWSLGRAFFIEENWDEAVRWFDRAHREYPTSPEGEKGYYQAGHALQNAGRYREAV 347 Query: 209 TFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS---IMASIC 265 + L A GD A+ + K + A Sbjct: 348 ARYEAFIAAYPDSEFIGGAHLNAIDALRL-AGDFKAALEWCDRAEKRFPRELVGVTARFQ 406 Query: 266 AAKSLISQNKKRKAEVILEKIWKVNPHP-------EIANIYTHLLSENTVGKLKRALRLE 318 AK +SQ R A +LE + ++ H + L + + A+ + Sbjct: 407 RAKIFMSQGNWRAALSVLEDMQRLPLHRRGPGSTDASEVTFLRGLCLERLERFAEAIEVY 466 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 ++ S Q + +LA+ P+ L+AQ + Sbjct: 467 LSLPDTRTSY------------YGQQATERLLALAENPKARA--LVAQ--HLERFRQSQT 510 Query: 379 LYWTQSALHAMPDPL 393 AL DP Sbjct: 511 KDALHQALRLTLDPQ 525 >gi|149925210|ref|ZP_01913503.1| SPY protein [Plesiocystis pacifica SIR-1] gi|149813915|gb|EDM73568.1| SPY protein [Plesiocystis pacifica SIR-1] Length = 404 Score = 39.9 bits (92), Expect = 1.1, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 87/272 (31%), Gaps = 47/272 (17%) Query: 134 RQYNIAHEKLEMMLQIPATREF------AVYSLYFESCRIGDLNSAQRYATKALDISPDA 187 + + A + + + T + L E + D A + AL + P+ Sbjct: 115 GRSDEARAAFDEAIALDDTDALPHAAIGNLVGL-SEGATVADKKRAIDHFQTALKLDPEL 173 Query: 188 PWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 A+ + +E+ RA+ + + + + + +A G+ + + Sbjct: 174 ASAHLALGVVLLDLREYQRAVEAIETADRLKGSVDTAYTL-----AQVHARLGNDEQALN 228 Query: 248 DAIESLKLCDNS--IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE 305 A +L+ N+ + + A+ L+ + Sbjct: 229 YAESALEYEANASGVDIRLLYARLLMKAGR------------------------------ 258 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA 365 ++ R ++ ++ + V + L+MG +D A +++ P + L+ Sbjct: 259 -DADAAEQFERCAKLVPDAPPLRLEVVRGLLDMGMVDAAAVHMDALLEMVPDEGPVLVNH 317 Query: 366 QIEQANSHNTDKILYWTQSALHAMPD--PLWI 395 A + + L +A A P+ W+ Sbjct: 318 GRVLAAQGDIEGALGRFAAAREAQPESQAAWV 349 >gi|313651040|gb|EFS15440.1| tetratricopeptide repeat family protein [Shigella flexneri 2a str. 2457T] gi|332754160|gb|EGJ84529.1| tetratricopeptide repeat family protein [Shigella flexneri K-671] gi|333016503|gb|EGK35834.1| tetratricopeptide repeat family protein [Shigella flexneri K-304] Length = 1033 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 458 ASQALKRAHALNKKPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 517 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R + ++ + ++L P V VL+ A + ++ Sbjct: 518 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 572 >gi|313201112|ref|YP_004039770.1| hypothetical protein MPQ_1373 [Methylovorus sp. MP688] gi|312440428|gb|ADQ84534.1| Tetratricopeptide TPR_2 repeat protein [Methylovorus sp. MP688] Length = 697 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 3/185 (1%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 +Y A E L + ++L +G A +A+ +SPD Sbjct: 155 ACQDAGRYAEAERCYEEALTLAPNDAALHFNLGNARRELGKTAQAAASYQRAIALSPDDA 214 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + AI + + R L+ + AD + + Sbjct: 215 DAHNNLGNALRELGQLPEAIACYQRALALKPDLYHARIHLIHQQQ-HAADWRGLEQQIDE 273 Query: 249 AIESLKLCDNSI--MASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 L + + A + ++ AE LE + +TH+ EN Sbjct: 274 VRGWLHSAPTAQISPFAFLAMPGTTAAEQRLCAERWLENRYASLTAQASELAFTHIRHEN 333 Query: 307 TVGKL 311 T ++ Sbjct: 334 TPLRV 338 >gi|295085226|emb|CBK66749.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A] Length = 651 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 12/129 (9%) Query: 134 RQYNIAHEKLEMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP--W 189 + Y+ A E LE +L++ TR + + S + D +A KAL++ P W Sbjct: 113 KDYDAAKEDLESLLKVSPRYTRAYLMRG--EVSLQQKDTIAALNDFNKALELDKYDPDAW 170 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 A+V+ +++ A N+ + A I R+L + ++ + D Sbjct: 171 SARAIVKLQ--QAKYAEAEADFNRAI----PLSAKNAGNYINRALARFHQNNLRGAMSDY 224 Query: 250 IESLKLCDN 258 +L + N Sbjct: 225 DLALDIDPN 233 >gi|242222770|ref|XP_002477088.1| predicted protein [Postia placenta Mad-698-R] gi|220723568|gb|EED77714.1| predicted protein [Postia placenta Mad-698-R] Length = 269 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAV 157 A H + + L L +A A + A E L+ ML A+ Sbjct: 169 GGYVSAAARHFGAVARDPSADASLKALNSALLASANGDWPAAVEALQQMLAADPENFVAI 228 Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVV 195 +L G + R +A+ +SP E ++ Sbjct: 229 NNLAVAYLSQGRIQEGIRMLEEAIKLSPSTTLQAEPLL 266 >gi|158337863|ref|YP_001519039.1| hypothetical protein AM1_4749 [Acaryochloris marina MBIC11017] gi|158308104|gb|ABW29721.1| tetratricopeptide repeat-containing protein [Acaryochloris marina MBIC11017] Length = 669 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 77/247 (31%), Gaps = 22/247 (8%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + Q + Q + + A L E+ ++ R A ++L Sbjct: 400 QAQDLVNSGQSEETASFKAETISVHLGEALAKRGLTTEALQV------LRQAQQSLKADS 453 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI-------LLIARSLENAD 238 + V ++ + + + A L + + + + L + + +D Sbjct: 454 ISSEVKYSLSKVLMQVGKVWEARQILQTGLQQDHFYLKVANMDTTPAVKLEMLQGQIYSD 513 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI--- 295 + ++++L ++ A ++L Q + +A + +K ++ PH ++ Sbjct: 514 LKRDDMALKHYQQAVRLEPKFALSYQAAGEALRRQGQYAQAILAFDKAVQLKPH-DLSVI 572 Query: 296 -----ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 T L + RL ++ VE + K L A Sbjct: 573 QQFYRGRGLTLLAQGKVNAAITDLERLIQLGSFDVEVAHGLGKALLRNNKPLAAIEHLET 632 Query: 351 AMKIAPR 357 A + PR Sbjct: 633 AYDMNPR 639 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 44/302 (14%), Positives = 86/302 (28%), Gaps = 44/302 (14%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML-------QIPATREFAVYS 159 SY + + +LL + + + A L Sbjct: 287 ASYTQRLKLSPTDGPSHLLMGNLLVRKGDAEKAFTHYRKFLGPDSSPTDDAELDTQTYLW 346 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK---- 215 L L++A + + ++P V + + + W +AI Q + Sbjct: 347 LAKAQKNHNRLDAAVKTYEQLATLNPQDAKVLYEMGKVLSQLERWDQAIDVFQQAQDLVN 406 Query: 216 ----KNAKEWNRNRAILLIARSLENA-DKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 + + + + +L + + A +SLK S +K L Sbjct: 407 SGQSEETASFKAETISVHLGEALAKRGLTTEALQVLRQAQQSLKADSISSEVKYSLSKVL 466 Query: 271 ISQNKKRKAEVILEKIWKVNP----------HPEI------ANIYTHLLSENTVGKLKRA 314 + K +A IL+ + + P + IY+ L ++ LK Sbjct: 467 MQVGKVWEARQILQTGLQQDHFYLKVANMDTTPAVKLEMLQGQIYSDLKRDDMA--LKHY 524 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP----------RKEIFLLL 364 + + + S + G QA A+++ P R LL Sbjct: 525 QQAVRLEPKFALSYQAAGEALRRQGQYAQAILAFDKAVQLKPHDLSVIQQFYRGRGLTLL 584 Query: 365 AQ 366 AQ Sbjct: 585 AQ 586 >gi|119620979|gb|EAX00574.1| intraflagellar transport 172 homolog (Chlamydomonas), isoform CRA_d [Homo sapiens] Length = 1265 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 29/196 (14%) Query: 109 YVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG 168 +S+ H V+L E ++ A + P ++ + Sbjct: 871 ELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIR-AGKPKEAVL----MFVHNQ--- 922 Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D +AQR A A D P V+ A+ + +K Sbjct: 923 DWEAAQRVAE-AHD-----PDSVAEVLVGQAR-----GALEEKDFQKAEG---------- 961 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWK 288 L+ R+ + ++L++C + + + + A + + +K +E + Sbjct: 962 LLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVE 1021 Query: 289 VNPHPEIANIYTHLLS 304 H E A Y+ + Sbjct: 1022 QARHWEQAGEYSRAVD 1037 >gi|298530570|ref|ZP_07017972.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509944|gb|EFI33848.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans ASO3-1] Length = 179 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 21/63 (33%) Query: 296 ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 A Y HL +T G + + E +E +++ L+ G A A I Sbjct: 100 ALGYAHLDKGDTAGAVDAFKEAIHQHPEQIEGYCDLARAYLKQGQESLARKYLARAEHID 159 Query: 356 PRK 358 Sbjct: 160 ASA 162 >gi|239815273|ref|YP_002944183.1| hypotheticalprotein [Variovorax paradoxus S110] gi|239801850|gb|ACS18917.1| TPR repeat-containing protein [Variovorax paradoxus S110] Length = 740 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 74/263 (28%), Gaps = 41/263 (15%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP---- 188 + A + +L ++ L + + A YA A+ I P Sbjct: 21 NGLLDQAEAGYQKILSRAPRHHPSLGMLAILGIQRNRPDEALHYADLAIAIEPRISNTHA 80 Query: 189 -------------WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN-----RAILLI 230 +A L + +T L K + R RA+ + Sbjct: 81 TRGNALHGLKRYEEAAQAYQVALTLNPDGHDVLTNLANAWKRLGRFERAMQCYDRALAMC 140 Query: 231 ARSLE--------NADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 S++ +KG + D L + + A + +R E + Sbjct: 141 PSSIDTRYNRGVALLEKGRHAEALDDFDAVLARSSDDLDA--LCQRIYALCGLQRHQEAL 198 Query: 283 LEKIWKVNPHPEIANIYTH--------LLSENTVGKLKRALRLEEINKESV-ESLVIVSK 333 E + HP A+ + S +R + L + + E + ++ Sbjct: 199 AESNHAIARHPSSADAWRAHGHVLLGMGNSLQAAQAFERVIDLGGPSSSARGEDHFLAAR 258 Query: 334 IALEMGSIDQAHAKAMLAMKIAP 356 + ++A A+K P Sbjct: 259 ALVGGSRHEEAFLHLERALKSDP 281 >gi|156550027|ref|XP_001604755.1| PREDICTED: similar to heat shock protein 70 (hsp70)-interacting protein [Nasonia vitripennis] Length = 575 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 3/98 (3%) Query: 125 LEVQIALAERQYNIAHEKL-EMMLQIPATREFAV-YSLYFESCRIGDLNSAQRYATKALD 182 L Q+ + + + A + + P V L + ++ A Y KA++ Sbjct: 443 LYAQMLVDSQDFARADSYFLKAAKRDPKNATILVYRGLL-QLQWQNNIEKAVEYIRKAIE 501 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE 220 + + E + V AI+ ++ + Sbjct: 502 LDDKCEFAYETLGTIEVQRGNLKDAISLFDKALALGRT 539 >gi|114569602|ref|YP_756282.1| sulfotransferase [Maricaulis maris MCS10] gi|114340064|gb|ABI65344.1| sulfotransferase [Maricaulis maris MCS10] Length = 536 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 10/155 (6%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A E ++ R Y+L G + A + L++ P A Sbjct: 121 GDHASAIGLFEAAVRQDGQRAAYHYNLAASRQFAGAFDLAAAGYERTLELEPGHVKALSA 180 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI--ARSLENADKGDMIASYH---- 247 VV + + L K A++ N A L + A + D G + Sbjct: 181 VVGLRRQTEA-DNRLDALESAFK-ARDKNDQEAQLHLGHAIAKTLEDLGRHDEALDWLGR 238 Query: 248 --DAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + +++ D + A + AA + S+ A Sbjct: 239 AKAVVSAVRQYDARVDADLFAAAARTSETSPSPAA 273 >gi|94967477|ref|YP_589525.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94549527|gb|ABF39451.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 377 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 66/217 (30%), Gaps = 15/217 (6%) Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A P A E + + W + Q K+A + +L + + Sbjct: 20 AQAPDPSAAIAFEQQGKLQEAERTW---REVIKQNPKDAGAFASLGVVL--------SKE 68 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY 299 + ++L L + + + +N A L+ + +P + A Sbjct: 69 QKYQEAAAADRKALTLDPSLPGVQLNLGLAEFKRNNFVAAIPPLKAAYAADPASKQAVTL 128 Query: 300 THLLSENTVGKLKRALRL---EEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 L + + + L + + ++E ++++ L + D A + P Sbjct: 129 LGLSYYGSKQFAEASKYLGIAAKADPANIELHQVLAQSCLSARNYDCALEEFRQISAQNP 188 Query: 357 -RKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPDP 392 + +L + H I + + + +P Sbjct: 189 QSAAVHMLTGEALDGTGHTAAAIEEFKAAVNISPREP 225 >gi|86159752|ref|YP_466537.1| hypothetical protein Adeh_3333 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776263|gb|ABC83100.1| tetratricopeptide repeat protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 274 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 79/247 (31%), Gaps = 31/247 (12%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + E G L+ A KA+++ P + + + Y K + A+ + Sbjct: 18 RGI--ELADRGWLDEAINEFHKAIELDPSSAHAHDNLATVYSEKKRYREALNEYLTALRL 75 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + L + + + ++++L + A + +L Q K Sbjct: 76 EPDSATAHYNLACFLATH-----GPDMAIAEYQDAIQLEPDHPDAHLNLGLTLADQGKTE 130 Query: 278 KAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A L ++ P H E+A + + + + + + E+ + + Sbjct: 131 EAVKELGVAIELEPTDPFPRH-ELAGLLMD--EGDYRAAIAHLKEVVRLEPSNFEAELDL 187 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLL-------LAQIEQANSHNTD 376 + G +A A + P ++ L L + +A + + D Sbjct: 188 GICYAQKGFYAEAERAYARAAALKPDDLLLNYDVAALYALWGKPAEALEALRKALAQDAD 247 Query: 377 KILYWTQ 383 K+ W + Sbjct: 248 KVRDWLR 254 >gi|325116407|emb|CBZ51960.1| putative TPR Domain containing protein [Neospora caninum Liverpool] Length = 1081 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 85/253 (33%), Gaps = 28/253 (11%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 A E E L + + + A YA+ +L P+ + +V Sbjct: 525 RGAVEAFERALHAKPGDRKLIRRIVAALVKTHQYERASTYASNSLREQPEDLELRLDLVA 584 Query: 197 QYVLAKEWSRAITFLNQKKKNAKEWNRNRAI------------LLIARSLENADKGDMIA 244 + W AI + + ++ + ++ L++++ + +GD Sbjct: 585 LLFRLRRWQEAIETASVVDGDNTAYDGSFSLGAKVQILLLKVKALLSQTSSYSARGDEAE 644 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY----- 299 A+ +L C A K + +++ E W+++ A++Y Sbjct: 645 LEDSALRTLHRC-------RVAIKRYLELHQRSAESASGEGAWRIS--RLGADVYCQLGA 695 Query: 300 -THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR- 357 + E++ E +L+ +S+I L G + A ++ P Sbjct: 696 ILERRKGEAEQAAQCFEEARELDSERTSALLALSRIRLRQGHLQAAEEYLSALQRLDPTN 755 Query: 358 KEIFLLLAQIEQA 370 + + L+ ++I A Sbjct: 756 EGVSLIKSEIVAA 768 Score = 36.5 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 53/187 (28%), Gaps = 17/187 (9%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN-------AKEWNRNRAILLIARSLENA 237 P + + ++L + A L + + A + + Sbjct: 389 PGHGMAKAMMARVHLLQGDTEAARRTLRDALSSRAFSDDLGGTKSSIAAHFCLMLARLEQ 448 Query: 238 DKGDMIASYHDAIESLKLCDNS---IMASICAAKSLISQNKKRKAEVILEKIWK-VNPHP 293 G ++L + + + A + + + +A LE+ K P P Sbjct: 449 LAGQPAEGLAQLEKALSFDLHLKSTLPYYLIKADLHLQKTEFDEAVSTLEESQKLATPTP 508 Query: 294 E----IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 E I + G ++ R + + + ++ ++A A Sbjct: 509 ENFTAIGEALLEVY--EPRGAVEAFERALHAKPGDRKLIRRIVAALVKTHQYERASTYAS 566 Query: 350 LAMKIAP 356 +++ P Sbjct: 567 NSLREQP 573 >gi|302829737|ref|XP_002946435.1| hypothetical protein VOLCADRAFT_86720 [Volvox carteri f. nagariensis] gi|300268181|gb|EFJ52362.1| hypothetical protein VOLCADRAFT_86720 [Volvox carteri f. nagariensis] Length = 280 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 13/216 (6%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 VY ++ G+ A+ + L P V + ++ +A + + Sbjct: 14 VYGAGIQAATRGEYAKAEVIFARMLSEDPSLASVWSNLGNVHMSQGRAKQAFDDYTRAVQ 73 Query: 217 NAKEWNR---NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 A + NRAI L L+ A +G + + E+L CD++I + + ++ Sbjct: 74 LAPDAPVPYLNRAIALEELGLQLAREGHVEEAGARWREALADCDSAISRDVREFAAWFNK 133 Query: 274 NKKRKAEVILEKIW-----KVNPHPEIANIYTHLLS-----ENTVGKLKRALRLEEINKE 323 E + P IA N+ G ++ + N Sbjct: 134 GNVELRLEDYEAALGCFSTAADLAPGIAGYRLRAAQLMYQVGNSEGAVRAVKGVIRKNPN 193 Query: 324 SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKE 359 E+ ++ + G + A + A+++ R Sbjct: 194 YAEAHTTLAAMLWSQGQLAAAEGQLEAALELGGRWR 229 >gi|288962428|ref|YP_003452723.1| hypothetical protein AZL_d03530 [Azospirillum sp. B510] gi|288914694|dbj|BAI76179.1| hypothetical protein AZL_d03530 [Azospirillum sp. B510] Length = 1243 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 19/233 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A ML A++ L + G A R +A+ P Sbjct: 37 AGDLDGAERGYRAMLAAQGGNADALHLLGVLHHQRGLDGEAVRLIGQAVARRPGVAE-QH 95 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI------LLIARSLENADKGDMIASY 246 A + A+ L + + A E+ R A+ + ++G + + Sbjct: 96 ANLGL---------ALHALGRLDEAAAEYRRALALRETYPEAHNSLGSALQEQGRLDEAA 146 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 +L L A L ++++ +AE L +++P A ++ + Sbjct: 147 SHYRRALDLNGGYAEAWANLGTLLRARDEYAQAETALRHALRLDPGHATALTNLGVVLKE 206 Query: 307 T---VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 T L + + E+LV ++ + ++A A A+ AP Sbjct: 207 TGRIAEAEAAHLEALRLAPDDAETLVNLALLREAQDRGEEAEALYGRALAHAP 259 >gi|170738868|ref|YP_001767523.1| TPR repeat-containing adenylate/guanylate cyclase [Methylobacterium sp. 4-46] gi|168193142|gb|ACA15089.1| adenylate/guanylate cyclase with TPR repeats [Methylobacterium sp. 4-46] Length = 647 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 10/167 (5%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A I A ++ + +H N+ + + ++ +I + ++ A +++ Sbjct: 454 AAEIAEADRIVTAYLAEHA--NDPMAFYVKAEIYKYRKNFDAALPLYLKSVELDKNFAQG 511 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQ 213 ++ G + Y KAL +SP P + W AIT NQ Sbjct: 512 YATIGNVKILSGKSAESFAYTEKALRLSPRDPAAKIWKYFICHANAHLARWDEAITTCNQ 571 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSI 260 + W I + A KG + H E LKL Sbjct: 572 AIADGPFWQ-----TYIDLAAAYAWKGRASEAGHAVAELLKLMPGYT 613 >gi|162450277|ref|YP_001612644.1| hypothetical protein sce2005 [Sorangium cellulosum 'So ce 56'] gi|161160859|emb|CAN92164.1| hypothetical protein sce2005 [Sorangium cellulosum 'So ce 56'] Length = 175 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 34/121 (28%), Gaps = 2/121 (1%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQIPATREFAVY-SLYFESCRIGDLNSAQRYATKALDI 183 L Q A + +++ + L R+GD + A A +AL Sbjct: 54 LLGHALYELGQLEPARDAYRAAVRLAPS-FLGARVGLSHALRRLGDTDGAIAQAKEALRR 112 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 P A+ Y ++A L E + I L D + + Sbjct: 113 FPKDGEAMHAMGLSYAARGNRAQARKHLQGFLDAGPEVEAAMEVRQILEMLGVGDDDEPL 172 Query: 244 A 244 Sbjct: 173 Q 173 >gi|114571439|ref|YP_758119.1| hypothetical protein Mmar10_2900 [Maricaulis maris MCS10] gi|114341901|gb|ABI67181.1| Tetratricopeptide TPR_2 repeat protein [Maricaulis maris MCS10] Length = 538 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 5/146 (3%) Query: 105 KMHSYVSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 + + T + +L+ LLE Q+ + A + + L + T A L + Sbjct: 98 RFKAIADAFPTAVDPHLMRGLLERQV----GDLDAARQAYQQALDLSETNIEARRGLAWV 153 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 D SA+ +A L P P A + + A T + + ++ Sbjct: 154 CENQRDWASARIHADAVLASEPTDPVALSARSGADMADGKPEAARTLIETQFDASRSTAS 213 Query: 224 NRAILLIARSLENADKGDMIASYHDA 249 + A + GD A++ Sbjct: 214 HNASVWRRLGDACEAMGDHEAAFSAW 239 Score = 36.8 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 50/176 (28%), Gaps = 11/176 (6%) Query: 295 IANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKI 354 + I + T L + + + + ++I ++ D A ++ Sbjct: 47 LKAICRRARQDRTAA-LHWIKQACDAAPGQLGFELAAAQILGDLKEFDAARSRFKAIADA 105 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSAL-------HAMPDPLWISDDGYLSSVWLP 407 P L+ + + + D Q AL A W+ ++ W Sbjct: 106 FPTAVDPHLMRGLLERQVGDLDAARQAYQQALDLSETNIEARRGLAWVCENQR---DWAS 162 Query: 408 LSPISKTLCYFEWKIPTKSPEYISSENINFSLEMAYPADDLQSMLNNGKKNHLPSI 463 + + E P ++ + E A + Q + +H S+ Sbjct: 163 ARIHADAVLASEPTDPVALSARSGADMADGKPEAARTLIETQFDASRSTASHNASV 218 >gi|85858705|ref|YP_460907.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85721796|gb|ABC76739.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus SB] Length = 322 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 40/129 (31%), Gaps = 6/129 (4%) Query: 268 KSLISQNKKRKAEVILEKIWKVNPH--PEIANI-YTHLLSENTVGKLKRALRLEEINKES 324 + + + I + + P P I + L + ++ ++ + ++ Sbjct: 89 RLYREGGQYDRLVSICRQAVEAQPEEPPLIRELGCAFLTAGMADEAVEIFEKMTGLEPDA 148 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTDKILYWT 382 E ++ + G +D A A+ + P LA + A + Sbjct: 149 PELFCLLGDALVAAGRLDSAEEAYRQAITLDPEEAARFCQRLAN-DLAEIGELGRAEEML 207 Query: 383 QSALHAMPD 391 +L A D Sbjct: 208 NRSLEARAD 216 >gi|73670517|ref|YP_306532.1| hypothetical protein Mbar_A3062 [Methanosarcina barkeri str. Fusaro] gi|72397679|gb|AAZ71952.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 391 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 11/144 (7%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + K+L +P+ + + Y+ E ++ + + E A Sbjct: 253 EEKLKEFEKSLKRNPEDADIWFEKGKLYLKLGELEKSREAFEKALEEKSE----NAEAWH 308 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 R + G + H +L+ N A + L+S + A E +K+ Sbjct: 309 LRGKILFETGSEKEALHAFEMALRKKPNFPEAWYEKGRVLLSLGNPKGA----ENAFKIA 364 Query: 291 PHPEIANIY-THLLSENTVGKLKR 313 +++ +E ++KR Sbjct: 365 A--DLSESKGAKAKAETARARVKR 386 >gi|225873829|ref|YP_002755288.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] gi|225792798|gb|ACO32888.1| tetratricopeptide repeat protein [Acidobacterium capsulatum ATCC 51196] Length = 734 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 91/275 (33%), Gaps = 13/275 (4%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 +L + A+A Q ++A ++ + L A+ L + G + A AL Sbjct: 90 HLQVARKAMAAHQDSVAAQQYRIFLAD------ALGELAIARAQAGQYSQAAENFDAALA 143 Query: 183 ISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 ++P++P + + A A + Q + + D Sbjct: 144 LAPNSPALLVEYARSEFQAGNLPHAKSLAQQIIQQYPHNKNALVRAYSILGRTQLAQQDA 203 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY--- 299 A+ + ++ L N AA L +++ + A I + + + ++Y Sbjct: 204 KAARKNLALAVALKPNFPNGYNLAAACLALEDQ-KCAAKIFSDMQASYGNTAVLHMYFGQ 262 Query: 300 THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE-MGSIDQAHAKAMLAMKIAPRK 358 +L S+ + + +N + + ++ L SID+A + + + P Sbjct: 263 AYLNSDFQRLAIAEFEKAIALNPKLPGAHYSLAAAYLATQQSIDKAEDELRKEIAVDP-- 320 Query: 359 EIFLLLAQIEQANSHNTDKILYWTQSALHAMPDPL 393 + L A + + T A DP Sbjct: 321 QSALAYAGLGHLETGQQKLSEALTDLQRAAALDPQ 355 >gi|206603643|gb|EDZ40123.1| Probable cellulose synthase operon protein C [Leptospirillum sp. Group II '5-way CG'] Length = 964 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 7/142 (4%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLN----Q 213 F L A + +AL P + + K + L+ + Sbjct: 281 RGNGFHFLSKNQLLKADKSFQRALLADPSDKEAAWGLAIVRMKQKRFQETRDILSWIRGR 340 Query: 214 KKKNAKEWNRNRAILL---IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 ++ ++ + R + RS + +G + + +K + A +S Sbjct: 341 QRLRPEQVSLMREAEYDENLHRSGQFLGEGKVSEARDILAILIKRRPDRPEAYALMGESD 400 Query: 271 ISQNKKRKAEVILEKIWKVNPH 292 + + +A E+ WK+NPH Sbjct: 401 RMEGRADRALKWYERAWKINPH 422 Score = 37.6 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 6/131 (4%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCR-IGDLNSAQRYATKALDISPDAPWVT 191 E + + A + L ++++ R A Y+L ES R G + A ++ +A I+P + + Sbjct: 369 EGKVSEARDILAILIKRRPDRPEA-YALMGESDRMEGRADRALKWYERAWKINPHSSAIA 427 Query: 192 EAVVQQYVLAKEWSRAITFLNQK----KKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 E ++ ++ +WS A FL+ KEW R L + +G+ + Sbjct: 428 EGLLWGWLKTGDWSTASRFLSDAPLRTVLPKKEWARWEGFLEKKKGERALIRGNRNLAMR 487 Query: 248 DAIESLKLCDN 258 ++ K + Sbjct: 488 LFRKAEKDRPD 498 >gi|196230744|ref|ZP_03129605.1| hypothetical protein CfE428DRAFT_2770 [Chthoniobacter flavus Ellin428] gi|196225085|gb|EDY19594.1| hypothetical protein CfE428DRAFT_2770 [Chthoniobacter flavus Ellin428] Length = 514 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 77/202 (38%), Gaps = 25/202 (12%) Query: 93 MSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQ--YNIAHEKLEMMLQIP 150 +++ H++ A + ++ + + + L ++A + + + A + L L P Sbjct: 95 IALGNHDLRGAEEHFGRAAELDRGNPVHRINLASFRLANSPDKEVHARAVKDLHDALADP 154 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE-AVVQQYVLAKEWSRAIT 209 R A+ L ++ R D +A + A + L P+ + E + + + A+ Sbjct: 155 NARLLAIRELLADATRRHDRENALQLADQ-LRAMPEHTFADELSCLDIVPTQDRFKAAVA 213 Query: 210 FLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS------ 263 ++ + A + + G+ + S+ A E+L+ A Sbjct: 214 DFEKRSE--------------ADAQKAIATGEWLNSHRLAPETLRWYPQLPSAVRSSTRM 259 Query: 264 -ICAAKSLISQNKKRKAEVILE 284 I AA++ ++ +K E L+ Sbjct: 260 QIVAAEAYLAVGDWQKLEAFLK 281 >gi|171320226|ref|ZP_02909284.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MEX-5] gi|171094515|gb|EDT39571.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia ambifaria MEX-5] Length = 647 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 71/246 (28%), Gaps = 18/246 (7%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 +L Q ++ A L++ A L D + A +A + Sbjct: 1 MLRAQ-----ERHADAIVHYRRALELNPALRVAHRGLAIALRATDDFDGALEHAR--AGL 53 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 D A+ + ++ A + + + A +G+ Sbjct: 54 ESDDAEGHCALGRSLRSMNDFDGAARLFERACEIDPGY----APAWCRLGELRCQQGEYE 109 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-----HPEIANI 298 S +++L A + + ++ AE+ +NP H +A Sbjct: 110 ESLRLCRHAIELDPELADAYNFLGLAYHNLDRMAAAELSHRHAIDLNPDDADAHHNLAAA 169 Query: 299 YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK 358 L + R + E+ + V+ + + I A A A++ P + Sbjct: 170 LFRLDKLDEAMSEYRIAQ--ELGVDPVKIQLTLGDILWAKRDFTGAVAAFREAVEHDPHR 227 Query: 359 EIFLLL 364 LL Sbjct: 228 AYARLL 233 >gi|134095739|ref|YP_001100814.1| tetratricopeptide repeat protein [Herminiimonas arsenicoxydans] gi|133739642|emb|CAL62693.1| conserved hypothetical protein; putative TPR repeat [Herminiimonas arsenicoxydans] Length = 391 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 85/272 (31%), Gaps = 49/272 (18%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLL--EVQIALAERQYNIAHEKLEMMLQIPATR 153 A ++H + + E+ V+ Q L + A E ++++ Sbjct: 82 GRGETERAIRVHQNLLARPDLPQEHKVHAQYELGQDYLNAGLLDRAEETFNLLVETQ--- 138 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 + A+++ Y KEW+RAI Sbjct: 139 --------------------------------YSAQAHRALLEIYQREKEWTRAIEAAGA 166 Query: 214 KKKNAKEWNRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 +++ + A + + A+ ++L ++ A++ + ++ Sbjct: 167 LQESGAGGRQKEIAQFYCELAQDELVHTHADAAIVLLEKALAADRKNVRATMLMGDAFLA 226 Query: 273 QNKKRKAEVILEKIWKVNPH---PEIANIYTHLLSE-NTVGKLKRALRLEEINKESVESL 328 ++ A W+ H P +A + L+ VG+ + + L + S+ Sbjct: 227 KDDIEAAL----LAWRRVEHQSVPHVALVAQRLMDGYRAVGRPQEGVNLLKFYLAEASSI 282 Query: 329 VIVS---KIALEMGSIDQAHAKAMLAMKIAPR 357 ++ + LE+ +D A ++ P Sbjct: 283 DLLEVVFQAVLELEGVDAATQMVSDELRRTPT 314 >gi|148237288|ref|NP_001084796.1| hypothetical protein LOC431836 [Xenopus laevis] gi|118835718|gb|AAI28925.1| LOC431836 protein [Xenopus laevis] Length = 495 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 57/179 (31%), Gaps = 19/179 (10%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A + + A+T + + N + R+ G ++ D +++L + Sbjct: 49 AAGQLAEALTHYHAAV-DGDPNNY---LTYYKRAAVYLAMGKFRSALPDLSRAIQLKPDF 104 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSE---------NTVGK 310 + A + L+ Q ++A + + +P E A + E + Sbjct: 105 LAARLQRGNILLKQGDVQEARQDFLSVLQSSPTNEEAQSQLERVQEVERNVGGASEAYER 164 Query: 311 ------LKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLL 363 + ++ E + + + ++ L++G + A K+ L Sbjct: 165 RDYYGAIALLEKVIEFSPWDPSARELRAECYLQVGELSNAVQDLKPTTKLRNDNRAAFL 223 >gi|328860029|gb|EGG09136.1| hypothetical protein MELLADRAFT_96407 [Melampsora larici-populina 98AG31] Length = 935 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 29/156 (18%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK--------- 215 GD++ A++ A + +P++ V A V+ + A + + + Sbjct: 603 QSNGDVDGARKILGDAFEANPESEQVWLAAVKLESENGQIEAAKQLMKRARDVAGTERIW 662 Query: 216 KNAKEWNRNR-----AILLIARSL---------------ENADKGDMIASYHDAIESLKL 255 + R A+ + ++L K ++ + K Sbjct: 663 MKNAVFERQHGSVDEALEITEKALIKFPTSEKLHMIKGQILESKQNLSGAREAYSIGTKK 722 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 C SI I +++ KA I+E+ NP Sbjct: 723 CPKSIPLWILSSRLEEKVGMTIKARAIMERARHYNP 758 >gi|325133785|gb|EGC56441.1| IgA-specific serine endopeptidase [Neisseria meningitidis M13399] Length = 1822 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 40/254 (15%) Query: 68 CPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEV 127 P R +G++++ + IA LAR+ Sbjct: 1167 APQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELARRQQEERKA--------------- 1211 Query: 128 QIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYAT-KALDIS-- 184 L +Q A + + + E+ R + ++ A KA ++S Sbjct: 1212 -AELLAKQRAEAEREAQALAARRKAEA-------EEAKRQAAELAHRQEAERKAAELSAN 1263 Query: 185 --PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDM 242 A A QQ LA++ A K E R A L + Sbjct: 1264 QKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAEL-AKQRAAAEAAKRQ 1322 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + A + + A+ +AK + R+A ++ + H + A Sbjct: 1323 QEARQTAELARRQEAERQ-AAELSAKQKAETD--REAAESAKRKAEEEEHRQAAQ----- 1374 Query: 303 LSENTVGKLKRALR 316 + + KR Sbjct: 1375 ---SQPQRRKRRAA 1385 Score = 39.1 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 44/214 (20%) Query: 78 KRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYN 137 R ++K +A ++A A + ++ + E Q A R++ Sbjct: 1082 ARRHEKEREA-----AELSAKQKVEAEREAQALAVRRKAEAEEAKR----QAAELARRHE 1132 Query: 138 IAHEKLEMMLQ----IPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD---APWV 190 E E+ + R+ A + R + Q Y A P V Sbjct: 1133 KEREAAELSAKQRVGEEERRQTAQ----SQPQRRKRRAAPQDYMA-ASQDRPKRRGHRSV 1187 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 + V+ ++A L ++++ R A LL + E + +A+ A Sbjct: 1188 QQNNVEI-------AQAQAELARRQQE----ERKAAELLAKQRAEAEREAQALAARRKAE 1236 Query: 251 --ESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 E+ + AA+ Q +RKA + Sbjct: 1237 AEEAKRQ----------AAELAHRQEAERKAAEL 1260 >gi|301779812|ref|XP_002925323.1| PREDICTED: protein TANC1-like [Ailuropoda melanoleuca] Length = 1872 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 131 LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ++Y A K E M R +L + D A+ +A+KAL++ Sbjct: 1319 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1378 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 P + A + +++++ A+ L + K + +L Sbjct: 1379 PKSYEAFYARARAKRNSRQFAAALADLREAVKLCPTNQEIKRLLA 1423 >gi|229025855|ref|ZP_04182253.1| TPR domain protein [Bacillus cereus AH1272] gi|228735466|gb|EEL86063.1| TPR domain protein [Bacillus cereus AH1272] Length = 219 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDQSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGHEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L ++ + A +C A+ Q K E +LE H A+ Y Sbjct: 127 QRATELDESDVEAVFQCGLCFARLEHIQEAKPYFEKVLE---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205 >gi|220910351|ref|YP_002485662.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425] gi|219866962|gb|ACL47301.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425] Length = 699 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 77/249 (30%), Gaps = 49/249 (19%) Query: 112 QQHTFHNEYLVY-----LLEVQIALAERQYNIAHEKL-EMMLQIPATREFAV-YSLYFES 164 Q+ + L + L + + +A+ ++ A + + P + Sbjct: 458 QRLQTNQPELFFTAADYLQQAEALVAQGRHREAIAAYDQALDLQPDSATTWYQRGNLRRK 517 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKE---- 220 + +A + +ALD+ PD P + ++ A +Q K Sbjct: 518 IQQ--YEAAVKDYDRALDLRPDYPEAWCDRGVALGIMQQHEAAFQSFDQAVKIEPTDQVA 575 Query: 221 -WNRNRAILLIAR---SLENADK----------------------GDMIASYHDAIESLK 254 NR A+ + R ++ + DK G + ++L Sbjct: 576 WLNRGLALQELERYEDAIASFDKVIELNPKAHKAWNNRGYALVKLGYDEDALESFDQALT 635 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---THLLSE-NTVGK 310 L + A A Q + + A L+ ++NP Y + + + + + Sbjct: 636 LDPDYGAAYYNKAICYALQGQVKPALENLQAAVELNP------TYRQEAAVEPDFDELAR 689 Query: 311 LKRALRLEE 319 +R RL Sbjct: 690 DRRFQRLIA 698 >gi|192361411|ref|YP_001983873.1| TPR domain-containing protein [Cellvibrio japonicus Ueda107] gi|190687576|gb|ACE85254.1| TPR domain protein [Cellvibrio japonicus Ueda107] Length = 875 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 12/199 (6%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTE---AVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + G + A Y + +P++ + ++ Y + A L + + Sbjct: 250 IQQGRTSEAYTYQKVLAEANPESNAAQQRFNQALELY-QQNKLEEAEAIL-AELREQFPN 307 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEV 281 ++N A LL + D + + I+ + + AA NK A Sbjct: 308 DKNTATLLGMIEFQQGDDERAANLFDEYIDPETAASSLL---QMAALVKYRSNKMEDAVE 364 Query: 282 ILEKIWKVNPH-PEIANIYTHL---LSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 +L+K + P+ P+I Y E + + +N + ++K + Sbjct: 365 MLKKASESQPNNPDILATYGLALLDRDEKSAEGAMALEKSLALNPRQQRIRIALAKRYMA 424 Query: 338 MGSIDQAHAKAMLAMKIAP 356 +G +QA + A + P Sbjct: 425 LGQPEQAIGQLQKAYQEQP 443 >gi|271966047|ref|YP_003340243.1| ATPase-like protein [Streptosporangium roseum DSM 43021] gi|270509222|gb|ACZ87500.1| ATPase-like protein [Streptosporangium roseum DSM 43021] Length = 1048 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 26/179 (14%) Query: 127 VQIALAERQYNIAHEKLEMML---------QIPATREFAVYSLYFESCRIGDLNSAQRYA 177 QI +++ A E + +TR L E R GDL A+ Sbjct: 817 AQIHAIGGEHDEAIAAYEHSIALATGLGSQDEVSTRL----GLATERMRAGDLTGARHDI 872 Query: 178 TKALDI-----SPDAP-WVTEAVVQQYVLAKEWSRAITFLNQ----KKKNAKEWNRNRAI 227 A P V ++ + Y + E RA L++ ++ + Sbjct: 873 ETAERAVWERGQPVLEIEVLGSLAELYRRSGEIERADRELDRMETLARRLRLTAETIENM 932 Query: 228 LLIARSLENADKGDMIASYH---DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 L+ AR GD + A+ + + + A+ A+ L ++ A L Sbjct: 933 LVPARMANLLTAGDAAPARELLPRAVRAARAHMGTPRAAQLLARLLFLEDDPAGAATAL 991 Score = 36.5 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 72/238 (30%), Gaps = 43/238 (18%) Query: 161 YFESCR---IGDLN---SAQRYATKALDISPDAPWVTEAVVQQ---YVLAKEWSRAITFL 211 E+ R GD +A A A + + D W + + + + E AI Sbjct: 774 MIEAMRYRERGDRESSATAMTAALHAFEEAGDQWWTAKTLYGLAQIHAIGGEHDEAIAAY 833 Query: 212 NQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + + E GD+ + HD + +++ Sbjct: 834 EHSIALATGLGSQDEVSTRLGLATERMRAGDLTGARHDIETAE--------------RAV 879 Query: 271 ISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGK-LKRALRLEE---INKESVE 326 + + +L +A +Y + L R L + E++E Sbjct: 880 WERGQPVLEIEVLGS---------LAELYRRSGEIERADRELDRMETLARRLRLTAETIE 930 Query: 327 SLVIVSKIA--LEMGSIDQAHAKAMLAMKIAP----RKEIFLLLAQIEQANSHNTDKI 378 ++++ +++A L G A A++ A LLA++ Sbjct: 931 NMLVPARMANLLTAGDAAPARELLPRAVRAARAHMGTPRAAQLLARLLFLEDDPAGAA 988 >gi|225433271|ref|XP_002282135.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296083733|emb|CBI23722.3| unnamed protein product [Vitis vinifera] Length = 531 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 47/151 (31%), Gaps = 18/151 (11%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 A + E M+ + + GDL A+ Y ++A P Sbjct: 228 AAADFDESGDVEEYYRRMVNEDPCNPLFLRNYAQLLQSKGDLQRAEEYYSRATLADPQDG 287 Query: 189 WV--TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS- 245 + A + + + ++ +RA+++ + K A + + A + D+G+ + Sbjct: 288 EILMQYAKL-IWDVHRDQARALSYFERAAKVASDDSHVLAANASFL-WDIEDEGEDDTAE 345 Query: 246 -------------YHDAIESLKLCDNSIMAS 263 E+ + A+ Sbjct: 346 QGLVEEGLSEFHNLDQEDENKPASPSLHPAA 376 >gi|254389793|ref|ZP_05005017.1| secreted protein [Streptomyces clavuligerus ATCC 27064] gi|197703504|gb|EDY49316.1| secreted protein [Streptomyces clavuligerus ATCC 27064] Length = 458 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 78/291 (26%), Gaps = 18/291 (6%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIA-LAERQ 135 + +Y L+ + + +H + + + L Q+ Sbjct: 119 RAQQQRPRRWTVYRALIDAQSGVGAY-KAVHGALDRLTALYQGSQSRALAAQVYRERAGA 177 Query: 136 YNIAHEKLEMMLQIPAT--REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + + T R A+ L + G+ A AL ++P+ Sbjct: 178 RTRRANAYDAVAAAAGTTERAVALRRLGDLAWERGEPREAVAGYDAALRLAPELHPARAG 237 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS--YHDAIE 251 + A+ + SL ++ + + A Sbjct: 238 RARALAALGRTDAALAEYRAALTRFPLPEYALEAGELYESLGRHEEAEESYAAVLETADR 297 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV-NPHPEIA-----NIYTHLLSE 305 + + + ++ + +A +L W+ +IA +Y ++ Sbjct: 298 AERYGVD---QTLTRGRYEADHGDPDEAVRLLTDAWEAGRRSTQIADGLGWALYRAGRAD 354 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 + KRA + + +I +G A A+++ P Sbjct: 355 EALPYAKRATKEGLRSPLFAYHR---GQIERSLGLYGSARRNIGTALRVNP 402 >gi|168703939|ref|ZP_02736216.1| hypothetical protein GobsU_30680 [Gemmata obscuriglobus UQM 2246] Length = 420 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 8/157 (5%) Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESC--RIGDLNSAQRYATKALDISPDAPWVTEAV 194 A + +L+ +A+ + G ++A T+ L +SP++ Sbjct: 173 EAAVAHFDALLKADPQNSWAL--FMRAASNNENGKHDAAIADYTEYLKLSPNSSAALNNR 230 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 ++ KE+ +AI K ++ A+ R +K D + D +++ Sbjct: 231 GTVWINKKEYDKAIEDFTTVLKADPKY----AVAYSNRGHALLNKKDYEKAVADCDRAIE 286 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 L A A++L K A E K++P Sbjct: 287 LDPQFAAAVWYRARALAKLKKYDAATAGFESAAKLDP 323 >gi|121997136|ref|YP_001001923.1| hypothetical protein Hhal_0327 [Halorhodospira halophila SL1] gi|121588541|gb|ABM61121.1| Tetratricopeptide TPR_2 repeat protein [Halorhodospira halophila SL1] Length = 413 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 7/163 (4%) Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 RA LI ++ + GD +++ +L++ + A + A+ L + +A +L+ Sbjct: 225 RADSLIQQAETHQRAGDTLSASQSYRRALEMDPDRHEARVGYARMLARAQRTERARGVLQ 284 Query: 285 KIWKVNP-HPEIANIYTHLLSEN--TVGKLKRALRLEEINKESVESLVIVSKIAL--EMG 339 + + P H +A +Y HL E + + + V AL + G Sbjct: 285 EGLERAPEHERMARLYAHLSEERGQPQDGIDALEPVYRAQEGEP-GAVAAHLAALYRQTG 343 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHN-TDKILYW 381 + DQA + P ++ + + + W Sbjct: 344 AHDQALMLYSELAEAEPDNGLWQAGIAVAAEQMGDHEGALRAW 386 >gi|221068238|ref|ZP_03544343.1| Tetratricopeptide TPR_4 [Comamonas testosteroni KF-1] gi|220713261|gb|EED68629.1| Tetratricopeptide TPR_4 [Comamonas testosteroni KF-1] Length = 385 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 45/113 (39%), Gaps = 4/113 (3%) Query: 177 ATKAL---DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK-EWNRNRAILLIAR 232 A +AL + + A++ Y +++W++A + + + + +++ A L Sbjct: 128 AEEALNRLEGTQYEGEARLALLAIYERSRDWAQAAAIVRKMQAAGQGDFSTRLAHYLCED 187 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + G + ++ ++L+ + + A+ Q + +A L+ Sbjct: 188 AQSQVAHGQLDKAFAQLQQALETAPQAPRPRLELAQLQHRQGRSEQALSSLQA 240 >gi|254282230|ref|ZP_04957198.1| sulfotransferase [gamma proteobacterium NOR51-B] gi|219678433|gb|EED34782.1| sulfotransferase [gamma proteobacterium NOR51-B] Length = 470 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 5/124 (4%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL Q+ Q A + +++ Y+L +GD+++A+ +A+ + Sbjct: 59 LLMTQV----GQREQALTLYQRAVELDPGEAKHYYNLATLQRSLGDVSAAEHNLDRAVAL 114 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P+ + + + + L + R + A + E D + Sbjct: 115 NPEDYEAYKIRSELR-RQTDTDNHVDELEHVLERGIRETRGEVQVCFALAKELEDLSEYE 173 Query: 244 ASYH 247 S+ Sbjct: 174 RSFQ 177 >gi|254443892|ref|ZP_05057368.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] gi|198258200|gb|EDY82508.1| tetratricopeptide repeat domain protein [Verrucomicrobiae bacterium DG1235] Length = 477 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 39/286 (13%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 G + + A + ++ + + L L + ++ A + + L + Sbjct: 110 GRILAGYGQLEEATPLFQKAAKLDPQYTPSHIRL--GDTLLKQNRFEEARDAYQAALSVD 167 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF 210 + +A+ + D + A++ KA+ +S + A Sbjct: 168 SQNPYALVGYARIAIADEDWSEARQQLEKAVQVS-----------NYQI------GADLL 210 Query: 211 LNQKKKNAKEWNRNRAI-LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKS 269 + +K E I L S + + D+ ++ ++ A Sbjct: 211 ADVYEKLGLEAKETEVIQNLSWGSYADIPDPWSLTLMDDSYDAYQVS--------IAGGW 262 Query: 270 LISQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKES 324 + Q +++ ++P +IA IY +L + R E+ + Sbjct: 263 VAHQGDVLTGLRYIKRAVMLDPESSTLQYQIAGIYLNLGDDQNAEI--HFKRCVELQPDF 320 Query: 325 VESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 ++ + + +IA S A++ AP IE+ Sbjct: 321 SDAWLSLIEIAKRRQSPTLLRRTLDSALRAAPDSPSL----NIERG 362 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 56/138 (40%), Gaps = 15/138 (10%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRAL-------RLEE 319 + L + +A + +K K++P +H+ +T+ K R Sbjct: 110 GRILAGYGQLEEATPLFQKAAKLDPQ----YTPSHIRLGDTLLKQNRFEEARDAYQAALS 165 Query: 320 INKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANS--HNTDK 377 ++ ++ +LV ++IA+ +A + A++++ + LLA + + + Sbjct: 166 VDSQNPYALVGYARIAIADEDWSEARQQLEKAVQVSNYQIGADLLADVYEKLGLEAKETE 225 Query: 378 ILYWTQSALHA-MPDPLW 394 ++ +A +PDP W Sbjct: 226 VIQNLSWGSYADIPDP-W 242 Score = 38.0 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 13/184 (7%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GD+ + RY +A+ + P++ + + Y+ + A + + +++ Sbjct: 266 QGDVLTGLRYIKRAVMLDPESSTLQYQIAGIYLNLGDDQNAEIHFKRCVELQPDFSDAWL 325 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 L+ + +L+ +S +I K +++Q + +A +K Sbjct: 326 SLIEIAKR----RQSPTLLRRTLDSALRAAPDSPSLNIERGKVILAQGRHSQAIPYFQKA 381 Query: 287 WKVNPHP-----EIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 V PH E+A Y E V +L+ L +L ++ A+ G Sbjct: 382 IDVRPHEAVGYIELAQAYLKSNQVEKGVEQLR--EALLR-EPNHPIALSSMAFDAIMRGD 438 Query: 341 IDQA 344 A Sbjct: 439 KADA 442 >gi|145298382|ref|YP_001141223.1| cytochrome c-type biogenesis protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851154|gb|ABO89475.1| Hypothetical cytochrome c-type biogenesis protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 424 Score = 39.5 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 10/149 (6%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 V ++ + L + K+ E N R LL+ R D D + + L Sbjct: 137 DAQVTEQDLLDFMLALRTRLKD--EPNDYRGWLLLGRLS--LDGNDPDMAREALERAYDL 192 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLK 312 M ++ A++L+ +A+ +L ++P A + L E+ L Sbjct: 193 APQKTMVAVPYAQALMMTGDDAQADELLRSAIALDPANIEARSVYAFMALQKEDFKTALM 252 Query: 313 R-ALRLEEINKESVESLVIVSKIALEMGS 340 R L + K S + + + +++ Sbjct: 253 RWREMLPLMEKGS--TRYAMVERSIDYAE 279 >gi|255554412|ref|XP_002518245.1| fkbp-rapamycin associated protein, putative [Ricinus communis] gi|223542592|gb|EEF44131.1| fkbp-rapamycin associated protein, putative [Ricinus communis] Length = 1440 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 79/271 (29%), Gaps = 42/271 (15%) Query: 100 IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS 159 LA K ++ H E + A + M P A+ Sbjct: 259 GALAEKCRAFAKALHYKEME----------------FEGARS--KKMDANPVAVVEALIH 300 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 + + + YA + LD+ W Y + W A+ K A Sbjct: 301 INNQLHQHEAAVGILTYAQQNLDVQLKESW--------YEKLQRWDDALKAYTAKAAQAS 352 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + L++ +L +A+ E LC + +A+ + A Sbjct: 353 SPH-----LVLEATLGRMRC---LAALARWEELNNLCKEYWTPAEPSARLEM-------A 397 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMG 339 + W + ++A Y + L + KL+ S + + + G Sbjct: 398 PMAANAAWNMGEWDQMAE-YVYRLDDGDETKLRGLGNTAATGDGSSSGTFFRAVLLVRRG 456 Query: 340 SIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 D+A A K + L+L E+A Sbjct: 457 KYDEAREYVERARKCLATELAALVLESYERA 487 >gi|238495490|ref|XP_002378981.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus flavus NRRL3357] gi|220695631|gb|EED51974.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Aspergillus flavus NRRL3357] Length = 638 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 80/213 (37%), Gaps = 18/213 (8%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 AA + LA H+ +H L ++L ++ A + + + + T Sbjct: 403 AAADDFELAI-SHNKDDADIYYHRAQLHFIL--------GEFAEAAKDYQKSIDLDRTFI 453 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 ++ L ++G + SA +++ D P V + + + +S AI ++ Sbjct: 454 YSHIQLGVTQYKMGSVASAMATFRRSVKNFEDVPDVYNYYGELLLDQQNFSEAIEKFDKA 513 Query: 215 KKNAKEWNRN--RAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K+ + LI ++L K D + + ++L + +A A+ L+ Sbjct: 514 VEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALIIDPECDIAVGTMAQLLL 573 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 Q K +A E+ E+A +++ Sbjct: 574 QQGKVSQALKYFERA------AELARTEAEIIN 600 >gi|188575467|ref|YP_001912396.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519919|gb|ACD57864.1| tetratricopeptide repeat family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 551 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 20/250 (8%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L +A+ Sbjct: 302 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALAAARALQGD 361 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + + LL AR L + Sbjct: 362 ASADDDARRDAYVLEAELHQRADDAPGELDAFERGLAAYPD----DSALLYARGLAWERR 417 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNPHPEIA-- 296 D+ + D + L ++ A + + ++A ++++ +P +A Sbjct: 418 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTADPD-NLAIV 476 Query: 297 -----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 477 DSYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEA 532 Query: 352 MKIAPRKEIF 361 ++ P Sbjct: 533 RRLDPDNRAL 542 >gi|184157110|ref|YP_001845449.1| hypothetical protein ACICU_00790 [Acinetobacter baumannii ACICU] gi|183208704|gb|ACC56102.1| hypothetical protein ACICU_00790 [Acinetobacter baumannii ACICU] Length = 572 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 34/294 (11%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 ++ L + + ALA A ++ + +L + DL +A A Sbjct: 47 DQALQQSMVAEFALAYDDIPTALHNYTVLAIKSNSTTIKQRALDV-ALEYNDLQAALNIA 105 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224 T + P + + E+ A L++ K + Sbjct: 106 THWVVQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 165 Query: 225 RAILLIARSLENADKGDMIASYHDAIES---------------LKLCDNSIMASICAAKS 269 R +LL A I + +E+ L+ + A Sbjct: 166 REVLLTALRSSAEKDNPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANL 225 Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 LI+ + + A K +K N +A + + L++ ++ + N + E Sbjct: 226 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIQSNPHAEE 285 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378 +L I ++++ D+A + A + + L E+ + T K Sbjct: 286 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 339 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321 A+ L K+ A +L++ K P PE+ IY +L KL K +L ++ Sbjct: 392 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 449 Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 S L + +AL+ + +A A A++ AP + L Sbjct: 450 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 491 >gi|157812772|gb|ABV81131.1| putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Thulinius stephaniae] Length = 289 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 8/166 (4%) Query: 106 MHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIA-HEKLEMMLQIPATREFAVYSLYFES 164 ++ + H + L L I + B A + + +P A +L Sbjct: 42 CYNTALRLCPTHADSLNNL--ANIKREQGLIBEAVRLYYKALEVLPEF-AAAHSNLASVL 98 Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G L + + +A+ ISP + + AI ++ + Sbjct: 99 QQQGKLQESIAHYKEAIRISPTFADAYSNMGNTLKEMGDXQGAIRCYSRAITINPAF--- 155 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSL 270 A + + D G++ + +LKL + A A L Sbjct: 156 -ADAHSNLASIHKDTGNITEAVASYRTALKLKPDFPDAFCNLAHCL 200 >gi|42523920|ref|NP_969300.1| hypothetical protein Bd2490 [Bdellovibrio bacteriovorus HD100] gi|39576127|emb|CAE80293.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 275 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 10/138 (7%) Query: 232 RSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 + + G + + ++ + + AK L + KA L+K ++ Sbjct: 28 LAEAYREMGMLQEARKTVTAGVQRHPQFVGGLVTYAKVLRDLGELSKALETLKKATALSS 87 Query: 292 HPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI-ALEMGSIDQ---A 344 +A+ HL +N LK + +N S + V K+ +L D+ A Sbjct: 88 ENILAHQLMAEVHLAQKNPKDALKSFKMVLFLNPNSKSAQKAVQKLESLTADEYDEDVFA 147 Query: 345 HAKA---MLAMKIAPRKE 359 K L P Sbjct: 148 MTKLPEVNLESSATPTGR 165 >gi|332975559|gb|EGK12449.1| glycosyl transferase family protein [Desmospora sp. 8437] Length = 389 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 14/139 (10%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + + D A +YA +A++ P+ V +A L+Q + + Sbjct: 244 ALSMNDSELALQYAEQAIEQEPNFSDAYFMVGTILAQHNHLDKAEAALHQALERKAKTPY 303 Query: 224 NRAILLIARSL-------ENADKGDMIASYHDAIESLKLCDNSIM----ASICAAKSLIS 272 LL S+ E + DA+ K ++ A Sbjct: 304 ---YLLADESMSTWKPLNELVEISRRKNRLEDAVGYAKRSLEVYPTNYRTNLMLASLYKQ 360 Query: 273 QNKKRKAEVILEKIWKVNP 291 + A+ ++ K+NP Sbjct: 361 LKRPEDAKKAYQEAVKINP 379 >gi|325283404|ref|YP_004255945.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus proteolyticus MRP] gi|324315213|gb|ADY26328.1| Tetratricopeptide TPR_2 repeat-containing protein [Deinococcus proteolyticus MRP] Length = 569 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 96/297 (32%), Gaps = 9/297 (3%) Query: 102 LARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLY 161 A+ + E L L AL + A + E ++ A + L Sbjct: 94 TAQPSAGQPAPAPALTAEQLSVLQAAYTALEQGNAAQARQGFEQLISQNYRHPEAHFGLA 153 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK--KKNAK 219 G +A+ + ++PD + V A ++ A+T+ Q Sbjct: 154 LALLAQGQTEAARFELGQLTALAPDRYEGPYNLGVLAVQAGQYPEALTYFGQAATLARTT 213 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + +L A + E + D E + L + + A++ + A Sbjct: 214 ASEDGQLYVLRALAAEQSRAADYAGLRQTLGEMVALDPGNAELKLRLAQAQTLTGEGVAA 273 Query: 280 E-VILEKIWKVNPHPEIANIYTHLL-----SENTVGKLKRALRLEEINKESVESLVIVSK 333 E + + A + + + E + +L RAL+ E L+ ++ Sbjct: 274 LPGTYEALGSTRTQADAALLLSDIYEAQGLPERGLSELDRALQSVTAEDERARLLLRRAR 333 Query: 334 IALEMGSIDQAHAKAMLAMKIA-PRKEIFLLLAQIEQANSHNTDKILYWTQSALHAM 389 + +G A A ++++ F LL + + ++ + + ++AL Sbjct: 334 LLDALGQSAAAITAAEQSVRLRGNDAAAFALLGDLRRGAGNSQGALQAYREAALLEP 390 >gi|304385039|ref|ZP_07367385.1| tetratricopeptide (TPR) domain protein [Pediococcus acidilactici DSM 20284] gi|304329233|gb|EFL96453.1| tetratricopeptide (TPR) domain protein [Pediococcus acidilactici DSM 20284] Length = 433 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 13/159 (8%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDI 183 A ++ A E + T + L E ++ ++ AQ K +D+ Sbjct: 193 AASYAASGKFEKAIAYYEQIHDEDLTPDI----LMQEGITYLQLNEVQRAQTVLEKVVDM 248 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 V ++ Y +EW + +T + A ++N + +L + D + Sbjct: 249 DSSYSSVYPYLIDAYRRDEEWDKGLTAAQEGL-AADQYNPDLYLLAAEMAEHAHDDELVE 307 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A+E L ++ A I Q R AE + Sbjct: 308 KYLQKAVE---LAPDNQAAIIRITDFYNRQG--RYAETL 341 >gi|302812149|ref|XP_002987762.1| hypothetical protein SELMODRAFT_126882 [Selaginella moellendorffii] gi|300144381|gb|EFJ11065.1| hypothetical protein SELMODRAFT_126882 [Selaginella moellendorffii] Length = 513 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 32/116 (27%), Gaps = 10/116 (8%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG-DLNSAQRYATKALDISP-- 185 + + A E + M + T + + G + A R A + L P Sbjct: 89 ALSRKGDLDHAREVFDAMAEEDRTEVSWL------AMIQGYARHGALRKAAELLKSMPRP 142 Query: 186 -DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKG 240 A++ + A + + ++ A++ D+ Sbjct: 143 HKGAAAHNALITAFAEKGHLVGAKKTFDSMAADEQDVVSWTAMMAAYAQSGRLDEA 198 >gi|299538577|ref|ZP_07051860.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1] gi|298726164|gb|EFI66756.1| hypothetical protein BFZC1_21303 [Lysinibacillus fusiformis ZC1] Length = 422 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 70/205 (34%), Gaps = 8/205 (3%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 +G+ + A + + SP+ P + Y + + A +N+ + Sbjct: 80 MELGNEDEALDLLLEIEETSPEYPQALLVLADYYQMQGLFEVAEKRINEALAILPD---- 135 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASIC--AAKSLISQNKKRKAEVI 282 +L A++ + G + + + + + + A+ + A Sbjct: 136 EPLLHFAKAELLFETGRFLEAARLYEDLYEQQNEFAGIQLVERLAEVYRAGAAYETAFDY 195 Query: 283 LEKIWKVNPHPEI--ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGS 340 K + P+I Y+ S+ +K+ L+E++ + + +++++ Sbjct: 196 YVKALEDEVKPDILFGAAYSAFQSQKYEMAIKQLEELKELDPDYFSAYLLLAESYAMTED 255 Query: 341 IDQAHAKAMLAMKIAPRKEIFLLLA 365 +A+A +K + L A Sbjct: 256 NQKAYAAIQEGLKRDEYDKSLYLFA 280 >gi|171915884|ref|ZP_02931354.1| TPR domain protein [Verrucomicrobium spinosum DSM 4136] Length = 596 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 61/204 (29%), Gaps = 37/204 (18%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATR 153 ++A + + ++ H L + L + A + A L+ A Sbjct: 31 ALADLDANAPAQPGQQLAGVAEQHAVALAHYLTARNLEASGKVRDALPHYLSFLKGDAGE 90 Query: 154 EFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 V + + +A +A+ P +P + +Q + Sbjct: 91 PELVAHIAELTLNFQGEEAAVALLEQAIKSHPKSPEPSANFIQFCLTHG----------- 139 Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 +A+ G + + A ++L A A + ++Q Sbjct: 140 ----------------------SAENGLLARAAKVAEQALSSFPQDAAAYETAVRLHLTQ 177 Query: 274 NKKRKAEVILEKIWKVNPHPEIAN 297 ++++A +LE+ P+ A Sbjct: 178 GRRKEASAVLERALA----PDFAQ 197 >gi|162456989|ref|YP_001619356.1| hypothetical protein sce8705 [Sorangium cellulosum 'So ce 56'] gi|161167571|emb|CAN98876.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 2686 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 4/127 (3%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 GD+ SA+ I+P V E V+ + L+Q +++ RA Sbjct: 1733 GDVESAKDTLESVARIAPREA-VIELRVEIARREGDGHALAAALDQLASASRDAPERRAQ 1791 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS---QNKKRKAEVILE 284 LL+ + + GD + A ++KL S A + A + R A+ +E Sbjct: 1792 LLVEAARATSTLGDDATALERARRAVKLAPESPDAVLEARRIEYRLRGTGTPRDAQAAVE 1851 Query: 285 KIWKVNP 291 ++ ++ P Sbjct: 1852 ELGRIAP 1858 >gi|152994353|ref|YP_001339188.1| TPR repeat-containing protein [Marinomonas sp. MWYL1] gi|150835277|gb|ABR69253.1| Tetratricopeptide TPR_2 repeat protein [Marinomonas sp. MWYL1] Length = 293 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 69/162 (42%), Gaps = 5/162 (3%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 Y +L ++ A+ I L ++ + ++ + + + + + L Q N A E+ + Sbjct: 90 YASLSASILP-ASEAIALYKRAQDELGKEVSNSQQQAICVGLGRAYLELAQLNKAKEQFQ 148 Query: 145 MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEW 204 L+ A+ L + GD+++AQ ALDI+P V + ++ + E+ Sbjct: 149 CALEASPKSVMALNGLGVIASMNGDVSTAQENLQDALDIAPSNEIVLNNLALSWLSSGEF 208 Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 +AI+ L K+ + R L +A + D+ DM Sbjct: 209 QKAISLLKTKQSSQNISTR----LNLALAYVLIDREDMAREL 246 >gi|104782032|ref|YP_608530.1| hypothetical protein PSEEN2965 [Pseudomonas entomophila L48] gi|95111019|emb|CAK15739.1| conserved hypothetical protein; putative signal peptide [Pseudomonas entomophila L48] Length = 1000 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 42/143 (29%), Gaps = 15/143 (10%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMM---LQIPATREFAVYSLYFESCRIGDLNSAQR 175 + L A A + R A + GD +SA+R Sbjct: 490 DPGSRLPLAYALEASGDSQAALPIWNSLPASAWTDNARLTAARG----ALNTGDASSARR 545 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 + A + W A + Q + +A+ F + ++ + A + Sbjct: 546 HWD-AAAHNSADDWALGAAIAQR--QGDLPQALAFQREALRHNPRADH-----YYAAAGT 597 Query: 236 NADKGDMIASYHDAIESLKLCDN 258 GD S E++++ + Sbjct: 598 AQQAGDTAQSTAWLAEAVRMAPD 620 >gi|227818747|ref|YP_002822718.1| hypothetical protein NGR_b05030 [Sinorhizobium fredii NGR234] gi|36959000|gb|AAQ87425.1| Tetratricopeptide repeat family protein [Sinorhizobium fredii NGR234] gi|227337746|gb|ACP21965.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 589 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 15/160 (9%) Query: 157 VYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ 213 V L E GD+++A + ++AL ++P+ P + + L+ EW + + Sbjct: 422 VRGLQAEMLAFFFRGDVDTALKIGSRALALNPNDPELRAEYGLRLALSGEWKTGCALVAE 481 Query: 214 KKKNAK-EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 A L + ++ +++ L + A L Sbjct: 482 AVSRNPGPIGYFEATLALCSYMQQDYATAEQWIRAADVQANPLY------HLIVAAILGQ 535 Query: 273 QNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLK 312 K +A E+ W P++ ++ E + L+ Sbjct: 536 LEKSAEAAR--ERRWIEAHAPDLLE---NIRGEVAMRILR 570 >gi|317126713|ref|YP_004100825.1| tetratricopeptide TPR_4 [Intrasporangium calvum DSM 43043] gi|315590801|gb|ADU50098.1| tetratricopeptide TPR_4 [Intrasporangium calvum DSM 43043] Length = 862 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 6/141 (4%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL----DISPDAPWV 190 +A + + + Q E +++ + GDL A +A + P + Sbjct: 151 DARLAEQLFDSLGQEFEATEV-LHNRAAIAMLRGDLPRALELFDRAADRYAALDRSNPGL 209 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 V+ + A + A T + RA L++A++ G + A Sbjct: 210 DLDRVEALLTAGLYDEAETVAREGLSRLDLAPVKRAELMLAQARAALATGKATLAGERAS 269 Query: 251 ESLKL-CDNSIMASICAAKSL 270 E+ +L D A + A+ L Sbjct: 270 EAARLFTDQLRDAWVDRARLL 290 >gi|281355287|ref|ZP_06241781.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC BAA-548] gi|281318167|gb|EFB02187.1| Tetratricopeptide repeat protein [Victivallis vadensis ATCC BAA-548] Length = 940 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 16/206 (7%) Query: 80 NYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLV---------YLLEVQIA 130 + +AL + + LA + + + + + Q A Sbjct: 567 RQQRENQALAEAKLKL---EAELAARPVIRQAAEPEVAVPPRIVTAKGNPAELVAAGQKA 623 Query: 131 LAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 E ++A L++ + A L + + N A A +PD P + Sbjct: 624 EQEESTDLAIWNYRTALELDPSNAAAASRLGMIHLKREEFNRALPLLDIARRATPDDPEL 683 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 T A +++ A+ L +K + R LL+ + A G + + Sbjct: 684 TAAAAAALNGQEKYGNALALLEPLRKKYPDDLR----LLLPFAKAQAGSGQLKIAGELYR 739 Query: 251 ESLKLCDNSIMASICAAKSLISQNKK 276 ++ KL S + + A+ + +K Sbjct: 740 QAEKLAPASPLPKLELARLYLQGDKP 765 >gi|110598468|ref|ZP_01386739.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] gi|110339918|gb|EAT58422.1| TPR repeat [Chlorobium ferrooxidans DSM 13031] Length = 197 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 26/183 (14%) Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 + R D A+ +ALD + + S A+ LN+ E N Sbjct: 9 QRERETDSLDARTLYEQALD---------------CMHEQRNSDALILLNRVL----ELN 49 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 R A L AR++ N + + D ++++ + + A ++ K+ +A Sbjct: 50 RRDAQALYARAVTNLSMSNFRKAGCDLLKTIAVDPGFLEAYKHLGFVQLTLGKEEEALKT 109 Query: 283 LEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 L+K ++P + I + + L + + ESVES ++ L Sbjct: 110 LQKALDIDPGYAGVYGVIGDTWLDLGEYEKAK--EAFESALRLEPESVESHYKIAMYYLS 167 Query: 338 MGS 340 G Sbjct: 168 RGD 170 >gi|94970897|ref|YP_592945.1| TPR repeat-containing protein [Candidatus Koribacter versatilis Ellin345] gi|94552947|gb|ABF42871.1| TPR repeat protein [Candidatus Koribacter versatilis Ellin345] Length = 196 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 1/142 (0%) Query: 135 QYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAV 194 Y A + + +++ + L G+ +A Y +A + +PD P ++ Sbjct: 55 DYPAAIAEFKRAVELKPSWADGYLWLANAMMENGEAEAAVSYYERAGEFAPDDPRPAISL 114 Query: 195 VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + K + AI + + + + A L +A +L D + + +LK Sbjct: 115 GRCFAKLKRYDDAIRMFRRGIELKPHYGKASAHLFLAEALLACRAIDQARREWEVVLTLK 174 Query: 255 -LCDNSIMASICAAKSLISQNK 275 + A+ A + L + Sbjct: 175 PMYPEHESAADTAREMLAKHKR 196 >gi|302877666|ref|YP_003846230.1| SEC-C motif domain-containing protein [Gallionella capsiferriformans ES-2] gi|302580455|gb|ADL54466.1| SEC-C motif domain protein [Gallionella capsiferriformans ES-2] Length = 553 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 47/174 (27%), Gaps = 9/174 (5%) Query: 128 QIALA---ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 Q ALA A ++Q A++ L + + A KA+ I+ Sbjct: 46 QTALAHHQAGHLAHAEAIYTQIIQNSPRHPDALHYLGMLASQTDRGEMAVTLIRKAIHIA 105 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P + + + A ++ A + + L+ D G+ Sbjct: 106 PSHLMHFNLATELRRQTR-FEEAAESFRNALALKADF--FEAYYSLGQLLQ--DMGEHAE 160 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIAN 297 + ++ L + A + L + P HP Sbjct: 161 AEACIRKAADLSPEYADVYVALASIYNDLGNFDASRSALTSALSIQPQHPAAWA 214 >gi|227432251|ref|ZP_03914247.1| tetratricopeptide repeat family protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352024|gb|EEJ42254.1| tetratricopeptide repeat family protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 442 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 6/150 (4%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 AL+ Q + A + L+ + +YSL E +G LN ++R K L+ PD Sbjct: 33 ALSSGQLDDAKKFFAQSLRKDSDDL--IYSLAEELYALGFLNQSRRAYKKLLEKYPDEDE 90 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + A+ + E A +L Q K ++ + + L+ ++ +G ++ H Sbjct: 91 LRTALADIAIEDGEIDEAQDYLAQIKPDSPSYLQ----ALLVKADVYQSEGLTESAEHSL 146 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKA 279 +++ ++ + + A+ + KA Sbjct: 147 LQAERIAPDEDVIQFALAEFYYANQSYPKA 176 >gi|209525934|ref|ZP_03274468.1| TPR repeat-containing protein [Arthrospira maxima CS-328] gi|209493611|gb|EDZ93932.1| TPR repeat-containing protein [Arthrospira maxima CS-328] Length = 745 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 4/92 (4%) Query: 167 IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 GD +A+ AL I+P+ V + Y K W+ AI + + A Sbjct: 58 QGDFMAAESCYHSALKIAPNMAEVYANLGSLYAQNKRWNEAINAYEKALEIRPNM----A 113 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDN 258 + G + +++ L + Sbjct: 114 GFYRNLAKVFTQCGQPERATEYWCKAILLSAD 145 >gi|326437831|gb|EGD83401.1| mbre TPR repeat protein [Salpingoeca sp. ATCC 50818] Length = 716 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 87/306 (28%), Gaps = 54/306 (17%) Query: 94 SIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQ----- 148 ++AA + AR + H LV ++ A L Sbjct: 256 AVAAVEVMQARGEDKTEAFARVCHQVGLVL-------SEFGGHDRAIASYNAALSILLRT 308 Query: 149 --IPATREFAVYSLYFESCR-IGDLNSAQRYATKALDIS--------PDAPWVTEAVVQQ 197 +Y+ + GD + A + KAL I + Sbjct: 309 EGEEGKNVAGLYNNLGTAYDGKGDYDKAIQCYEKALAIRVEMLGEEHSSTADTYNNLGNA 368 Query: 198 YVLAKEWSRAITFLNQKKKNAKEW--NRNRAILLIARSLENA--DKGDMIASYHDAIESL 253 Y E+ RAI F + E ++ + L NA +KG + +L Sbjct: 369 YHSKGEYDRAIEFFEKALVIRMEVLGEKHLSTADSYLGLGNAYYNKGKYDRAIRFYENAL 428 Query: 254 KLCDNSI----MASICA----AKSLISQNKKRKAEVILEKIWKV------NPHPEIANIY 299 + ++ ++ A + S+ + +A + K V HP A Y Sbjct: 429 AMKVEALGEKHPSTAGAYGNLGNAYASKGEYDRAIQVYTKGLAVTVEALGEKHPSSAATY 488 Query: 300 THL----LSENTVGKLK---------RALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 +L S+ + R L + + + E+ + G D+A Sbjct: 489 NNLGNAHDSKGDYDRAVECYEKALAIRVEALGQKHPSTAETYNNLGIAYQNKGQYDKAIQ 548 Query: 347 KAMLAM 352 + Sbjct: 549 HYEKGL 554 >gi|325914836|ref|ZP_08177171.1| PAS domain S-box [Xanthomonas vesicatoria ATCC 35937] gi|325538927|gb|EGD10588.1| PAS domain S-box [Xanthomonas vesicatoria ATCC 35937] Length = 653 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 11/169 (6%) Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKE 203 + P T V + S GD+ + A I P P V A ++ + A+ Sbjct: 70 RSLRAEPRTALLPVVHVSAASIATGDMITGLDAGADAYLIHPVDPNVLVATLRTLLRARH 129 Query: 204 WSRAITFLNQKKKN-----AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDN 258 A+ + + + A L + A+ DAI + L Sbjct: 130 AEEALRVSEARFREIFEHISAPIAVVDAALHTHELNAAFQRLIGDATPADAIGAAGLDQT 189 Query: 259 SIMASICAAKSLISQ--NKKR--KAEVILEKIWKVNPH--PEIANIYTH 301 + + ++ +A + + + + E W+V+P+ P++ + Sbjct: 190 ATVQALASALAQRERWSGTLSILRDGKLCETEWRVSPYREPDLGLLLVE 238 >gi|16330731|ref|NP_441459.1| photosystem I assembly protein Ycf3 [Synechocystis sp. PCC 6803] gi|18202349|sp|P74063|YCF3_SYNY3 RecName: Full=Photosystem I assembly protein ycf3 gi|1653223|dbj|BAA18139.1| ycf3 [Synechocystis sp. PCC 6803] Length = 173 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 10/116 (8%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQ 174 E VY + A A+ +Y A + E + + P R + +Y++ GD A Sbjct: 33 KEAFVYYRDGMSAQADGEYAEALDNYEEALRLEENPNDRSYILYNMALIHASNGDHEKAL 92 Query: 175 RYATKALDISPDAPWV--TEAVV-----QQYVLAKEWSRAITFLNQKKKNAKEWNR 223 +A++++P P AV+ ++ A + A ++ + K+ R Sbjct: 93 GLYQEAIELNPKMPSALNNIAVIYHFQGEKAKEAGQEDDAENLFDKAAEYWKQAIR 148 >gi|218885582|ref|YP_002434903.1| hypothetical protein DvMF_0478 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756536|gb|ACL07435.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 599 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 86/262 (32%), Gaps = 20/262 (7%) Query: 105 KMHSYVSQQHTFHNEYLVY--LLEVQIALAERQYNIAHEKLEMMLQI----PATREFAVY 158 K+++ + LL E ++ + L +++ P F + Sbjct: 297 KLNNPAKAYELARQGPETFGFLLTAATLFLEEKFYEQADALLTVVKDTPGAPEEVYFYLA 356 Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L FE R D A + ++ + Q + + + A+ L + +K Sbjct: 357 VLSFEGKR--DPAGALHWLSEITPSNKYHDRALRLKSQLQYESGDLTGALATLKEGQKTY 414 Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + + + A+ E+ K + + L + +K + Sbjct: 415 P----GQKEFWQMEAQLYLNSDKPEAALAVMDEARKFWPDDAEIAFMRGIILDERGQKAE 470 Query: 279 AEVILEKIWKVNPHPEIANI-----YTHLLSENTVGK-LKRALRLEEINKESVESLVIVS 332 A ++E++ + HP A YT + + L+ R E + +S + ++ Sbjct: 471 AFTMMEQV--IADHPRHAQALNYVGYTLAEQGRDLDRALELITRALEESPDSTYIIDSLA 528 Query: 333 KIALEMGSIDQAHAKAMLAMKI 354 G +++A A+++ Sbjct: 529 WTHYRRGELNEAWQAVSRAVEL 550 >gi|119497941|ref|XP_001265728.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Neosartorya fischeri NRRL 181] gi|119413892|gb|EAW23831.1| mitochondrial outer membrane translocase receptor (TOM70), putative [Neosartorya fischeri NRRL 181] Length = 630 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 9/182 (4%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 Q+ ++ A + + + + T F+ L ++G + SA +++ Sbjct: 417 RAQLHFILGEFAEAAKDYQKSIDLDRTFIFSHIQLGVTQYKMGSVASAMATFRRSVKNFE 476 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN--RAILLIARSLENAD-KGDM 242 D P V + + + +S AI ++ + K+ + LI ++L K D Sbjct: 477 DVPDVYNYYGELLLDQQNFSEAIEKFDKAVEMEKQSKPMGINVLPLINKALALFQWKHDF 536 Query: 243 IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL 302 + + ++L + +A A+ L+ Q K +A E+ E+A + Sbjct: 537 QEAENLCQKALIIDPECDIAVGTMAQLLLQQGKVSQALKYFERA------AELARTEAEI 590 Query: 303 LS 304 ++ Sbjct: 591 VN 592 >gi|319945707|ref|ZP_08019958.1| hypothetical protein HMPREF9421_0139 [Streptococcus australis ATCC 700641] gi|319748067|gb|EFW00310.1| hypothetical protein HMPREF9421_0139 [Streptococcus australis ATCC 700641] Length = 355 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 125 LEVQIALAERQYNIAHEKLEMMLQI---PATREFAVYSLYFESCRIGDLNSAQRYA 177 L +Q + E A E + +L+ P + + SL + GD A+ YA Sbjct: 223 LALQGEVLEGDREAAKEHFQALLKRTDNPMIQTASQLSLLHIALLEGDHEKAEEYA 278 >gi|281337461|gb|EFB13045.1| hypothetical protein PANDA_014794 [Ailuropoda melanoleuca] Length = 1843 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 131 LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ++Y A K E M R +L + D A+ +A+KAL++ Sbjct: 1290 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1349 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 P + A + +++++ A+ L + K + +L Sbjct: 1350 PKSYEAFYARARAKRNSRQFAAALADLREAVKLCPTNQEIKRLLA 1394 >gi|258651504|ref|YP_003200660.1| hypothetical protein Namu_1267 [Nakamurella multipartita DSM 44233] gi|258554729|gb|ACV77671.1| hypothetical protein Namu_1267 [Nakamurella multipartita DSM 44233] Length = 336 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 11/116 (9%) Query: 382 TQSALHAMPDPLWISDDGYLSSVWLPLSPISKTLCYF----------EWKIPTKSPEYIS 431 + PDP+W +D S+ W P +P + + + PT + Sbjct: 219 MARPVTPAPDPVWTADGPARSTPWSPPAP-TGYPGGYPAAAAWAPPADDDRPTGPQPIVG 277 Query: 432 SENINFSLEMAYPADDLQSMLNNGKKNHLPSIKKVSSFEDSTIHPLDPHIRQPDDP 487 + PA+ + + P+ S + P P +P +P Sbjct: 278 DRTGPGAAPPQGPAERELPRVAPVTLDKAPAADPSSGPTEIYRVPPRPDTERPQEP 333 >gi|229032045|ref|ZP_04188028.1| TPR domain protein [Bacillus cereus AH1271] gi|228729290|gb|EEL80284.1| TPR domain protein [Bacillus cereus AH1271] Length = 219 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 65/205 (31%), Gaps = 19/205 (9%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 + E + A + ++ + +GD A + +AL++ + Sbjct: 11 YMQEGNWEEAAKNFTEAIEENPKDALGYINFANLLDVLGDSERAILFYKRALELDDKSAA 70 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y ++++ A Q + A + + + G+ + Sbjct: 71 AYYGLGNVYYGQEQFAEAKAVFEQAMQAGL----QSADVTFMLGITHVQLGNDRLALPFL 126 Query: 250 IESLKLCDNSIMAS----ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-----T 300 + +L +N + A +C A+ Q K E +L+ H A+ Y Sbjct: 127 QRATELDENDVEAVFQCGLCFARLEHIQEAKPYFEKVLK---MDEEH---ADAYYNLGVA 180 Query: 301 HLLSENTVGKLKRALRLEEINKESV 325 ++ EN L + EI + Sbjct: 181 YVFEENNEKALTLFKKATEIQPDHF 205 >gi|91217217|ref|ZP_01254178.1| tetratricopeptide repeat protein [Psychroflexus torquis ATCC 700755] gi|91184560|gb|EAS70942.1| tetratricopeptide repeat protein [Psychroflexus torquis ATCC 700755] Length = 684 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 6/124 (4%) Query: 113 QHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNS 172 F+N+ L + L + + A E++ + + A+ L S G Sbjct: 187 LILFNNDKATLLNLANLYLIANRLDDAKATYELLAENLDNKVAALNGLALVSHLNGKNKE 246 Query: 173 AQRYATKALDISPDAPWVTEAV------VQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 A + KA D P ++ +Q + K+++ + ++ K N A Sbjct: 247 ALIISQKAYDSLPILKNTSDIKQTQERYIQALIWNKKYNESEELIDALLKEQPNKNWILA 306 Query: 227 ILLI 230 + Sbjct: 307 LQAT 310 >gi|53804259|ref|YP_113868.1| tetratricopeptide repeat-containing protein [Methylococcus capsulatus str. Bath] gi|53758020|gb|AAU92311.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 401 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 14/148 (9%) Query: 69 PAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 P M LH ++ G L GL+ A + + ++ + L +L Sbjct: 100 PQMSDEQLHAIRFELGMDYLSAGLL-------DRAETVFAGLTATASHGKASLQQMLA-- 150 Query: 129 IALAERQYNIAHEKLEMMLQ-IPATREFAVYSLYFE----SCRIGDLNSAQRYATKALDI 183 I +E+ + A E + + R + L E + G+ +A + +AL Sbjct: 151 IYQSEKDWVRAAECARSLKKFDAGQRNATLAHLLCEQAESAIARGETVAAHAHLQQALAE 210 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFL 211 P T + + ++W+ A T L Sbjct: 211 DPRCVRATLLKSRLALQRQQWAEAGTLL 238 >gi|21230343|ref|NP_636260.1| hypothetical protein XCC0869 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769663|ref|YP_244425.1| hypothetical protein XC_3361 [Xanthomonas campestris pv. campestris str. 8004] gi|188992875|ref|YP_001904885.1| Putative secreted protein [Xanthomonas campestris pv. campestris str. B100] gi|21111896|gb|AAM40184.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574995|gb|AAY50405.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734635|emb|CAP52845.1| Putative secreted protein [Xanthomonas campestris pv. campestris] Length = 562 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 82/249 (32%), Gaps = 18/249 (7%) Query: 123 YLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYS---LYFESCRIGDLNSAQRYATK 179 LL +IA ++Y+ A E + P E + + LY + L A+ Sbjct: 313 RLLLGKIAEFLKRYDEAVEWYRGVPGGPQLSEARLRAASALYELGRKPEALKEARALQGD 372 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A + + A + + + + LL AR L + Sbjct: 373 ASADDDARRDAYVLEAELHQRANDAPGELDAFARGLAAYPD----DGALLYARGLAWERR 428 Query: 240 GDMIASYHDAIESLKLCDNSIMA-SICAAKSLISQNKKRKAEVILEKIWKVNP-HPEI-- 295 D+ + D + L ++ A + + ++A ++++ P +P I Sbjct: 429 DDVPRAEADLRKILVAEPENVAALNALGYTLADRTTRYKEALALIDRARTAAPDNPAIVD 488 Query: 296 ---ANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAM 352 +Y ++ + +L+RA L + E V ++ G D+A A Sbjct: 489 SYGWVLYRMGRTKEALVQLRRAWALVK----DPEIAAHVGEVLWVSGKQDEARRYFDEAR 544 Query: 353 KIAPRKEIF 361 ++ P Sbjct: 545 RLDPDNRAL 553 >gi|83311255|ref|YP_421519.1| hypothetical protein amb2156 [Magnetospirillum magneticum AMB-1] gi|82946096|dbj|BAE50960.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 1208 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 69/209 (33%), Gaps = 14/209 (6%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 + R GD A + +++ P A Q LA A+ F + E +R Sbjct: 35 ARRYGDTEPALDAYRRIIELDPSNTDALLAAAQACRLAGRPRDALLFC----LDLLEMDR 90 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + + G ++ L +S+ + L +N+ AE+ L Sbjct: 91 QHMGCRLELAEALRQIGQPDEAHAIIDILLMERPDSVQVWCGLGRLLNDENRLAGAELTL 150 Query: 284 EKIWKVNPH--PEIANI----YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 + V+P P A + E V A+ LE V ++++ LE Sbjct: 151 RRALGVDPGYGPAWAALGRILARRGEGEAAVDAFHAAITLEPEQPAH---QVGLAEVLLE 207 Query: 338 MGSIDQAHAKAMLAMKIAPRKEIFLLLAQ 366 D+A A+ + + +A+ Sbjct: 208 AHRTDEAAEHINRALALD-DECAAAHMAR 235 >gi|332668078|ref|YP_004450866.1| hypothetical protein Halhy_6171 [Haliscomenobacter hydrossis DSM 1100] gi|332336892|gb|AEE53993.1| Tetratricopeptide TPR_1 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100] Length = 423 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 82/223 (36%), Gaps = 23/223 (10%) Query: 123 YLLEVQIALAERQYNIAHEKL-EMMLQIPAT----REFAVYSLYFESCRIGDLNSAQRYA 177 +L Q+ + +R+ A ++L + + + P + R A+ + + + +A A Sbjct: 4 HLDRAQLLMEQRRLPEAEKELAQALQENPESGSVFRLLALCKIMGQ-----NYPAALAPA 58 Query: 178 TKALDISPDAPWVT--EAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLE 235 KAL + PD P AVV Y + +A + + + + E Sbjct: 59 QKALALDPDDPSNHYILAVVYFYNNQSD--QAKSLIRSGLNLNP-----YMPNMFELAGE 111 Query: 236 NADKGDM-IASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE 294 A D + +A + L++ A++L+ N+ +AE + +PH Sbjct: 112 IAMHEDRWEEALFNAEKGLEIDPEDTELVNLRARALLKLNRTAEAEATMNYALYTDPHNS 171 Query: 295 IANI---YTHLLSENTVGKLKRALRLEEINKESVESLVIVSKI 334 +++ + + N + +N ++ + + + Sbjct: 172 MSHANQGWVAVNQNNFEQAIASFKEALRLNPQNNHARAGLKEA 214 Score = 38.8 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 7/164 (4%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 Q + + A L Q + E +L + + + + A+ A ++L L Sbjct: 9 QLLMEQRRLPEAEKELAQALQENPESGSVFRLLALCKIMGQ----NYPAALAPAQKALAL 64 Query: 256 CDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLLSENTV--GKLK 312 + A N+ +A+ ++ +NP+ P + + + L Sbjct: 65 DPDDPSNHYILAVVYFYNNQSDQAKSLIRSGLNLNPYMPNMFELAGEIAMHEDRWEEALF 124 Query: 313 RALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 A + EI+ E E + + ++ L++ +A A A+ P Sbjct: 125 NAEKGLEIDPEDTELVNLRARALLKLNRTAEAEATMNYALYTDP 168 >gi|312373067|gb|EFR20893.1| hypothetical protein AND_18345 [Anopheles darlingi] Length = 501 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 15/166 (9%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG------DLNSAQRYATK 179 Q + +Y+ A + +L + A + Sbjct: 309 MAQFLYSTGKYDKAI-YF-----VQKACFLKPRNLEALILKAEILLQLKKNQQAIAHLRY 362 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A +P + + +V Y+ A + K R ++L+AR+ D+ Sbjct: 363 AQQFAPYRYEIHKVLVDSYLNMGRLREAQ--VQALKAVKMIGETARMLVLLARTY-MKDR 419 Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK 285 + I++L + +N + A A+ +N + +L+K Sbjct: 420 TTRPKAKALFIKALGINENYLPAVYLLAELYQRENDVASSMELLKK 465 >gi|307154400|ref|YP_003889784.1| tetratricopeptide repeat-containing protein [Cyanothece sp. PCC 7822] gi|306984628|gb|ADN16509.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822] Length = 291 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 65/204 (31%), Gaps = 17/204 (8%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + R +A A + ++P + Y+ +E+ I LN+ Sbjct: 52 IQLVRFQQPEAALSRAKLSTQLAPGHFQTWFILGTLYIQQEEFDAGIDALNRALA----L 107 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK------ 275 A + +GD + + LKL ++ A S K Sbjct: 108 EPKEAGIFFTLGSAYFQRGDYQTAIAQIDKGLKLKPDNPAALFDLGNSYYKLQKYPKAVE 167 Query: 276 -KRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGKLKRALRLEEINKESVESLVIVSK 333 +KA + +K W P I N+ + G +K+ I+KE E + ++ Sbjct: 168 AYQKAVSVDKKFW-----PAINNMGLIKYEQGDLAGAIKQWQAAVAIDKEQAEPQLALAV 222 Query: 334 IALEMGSIDQAHAKAMLAMKIAPR 357 G + A A+ + R Sbjct: 223 ATYAQGRQQEGLKMAEAALTLDSR 246 >gi|293399416|ref|ZP_06643569.1| periplasmic protein [Neisseria gonorrhoeae F62] gi|291609985|gb|EFF39107.1| periplasmic protein [Neisseria gonorrhoeae F62] Length = 617 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 75/321 (23%) Query: 124 LLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDI 183 LL + AL + Q A +ML+ + E A +L + + A+ K I Sbjct: 70 LLGGETALQKGQAGTALATYMLMLERTKSPEVAERAL-EMAVSLNAFEQAEMIYQKWRQI 128 Query: 184 SP-------DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSL-- 234 P A W+ + + + L + + + + R LL+ ++ Sbjct: 129 EPIPGEAQKRAGWLRNVLREGGNQH------LDGLEEVLAQSDDVQKRRIFLLLVQAAVQ 182 Query: 235 -------------------ENADKGDMIAS--------YHDAIESL----KLCDNSIMAS 263 E+ + + + AIE+L KL + + Sbjct: 183 QGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQGREKEKAIEALQRLAKLDTEILPPT 242 Query: 264 ICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLL---------SENTVGKLKRA 314 + + RK IL+ ++ ++ ++ + ++ +L Sbjct: 243 LMTLRLTA-----RKYPEILDGFFEQTDTQNLSAVWQEMEIMNLVSLRKPDDAYARLN-- 295 Query: 315 LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA------PRKEIFLLLAQIE 368 L E N + + + A+ + + + + A ++ + A + Sbjct: 296 -VLLEHNPNAN----LYIQAAILAANRKEGASVIDGYAEKAYGRGTGEQRGRAAMTAAMI 350 Query: 369 QANSHNTDKILYWTQSALHAM 389 A+ + K+ W + + A Sbjct: 351 YADRRDYAKVRQWLKK-VSAP 370 >gi|296810960|ref|XP_002845818.1| stil [Arthroderma otae CBS 113480] gi|238843206|gb|EEQ32868.1| stil [Arthroderma otae CBS 113480] Length = 577 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 45/153 (29%), Gaps = 12/153 (7%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 A + L T E R A+ A K + P+ Sbjct: 343 GDLATAISNYQKSLTEHRTPEI------LAKLR--AAEKAKIKAEKEAYLDPEEAEKARE 394 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + +W A+ + K A + +R R+ + D E++ Sbjct: 395 LGNKKFKEADWPGAVEAYTEMTKRAPDDHRG----YSNRAAALIKLMAFPQAVQDCDEAI 450 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 K I A + A++L + + K + + Sbjct: 451 KRDPKFIRAYLRKAQALFAMKEYNKCLDVCTEA 483 >gi|332088000|gb|EGI93125.1| tetratricopeptide repeat family protein [Shigella boydii 5216-82] Length = 1093 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 33/115 (28%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ASQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R + ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNDNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARLQREKLLRD 632 >gi|325925710|ref|ZP_08187086.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans 91-118] gi|325926864|ref|ZP_08188146.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans 91-118] gi|325542765|gb|EGD14225.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans 91-118] gi|325543879|gb|EGD15286.1| uncharacterized enzyme of heme biosynthesis [Xanthomonas perforans 91-118] Length = 421 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 55/361 (15%), Positives = 107/361 (29%), Gaps = 31/361 (8%) Query: 4 LIRYFFVISLVICSFIIVSHYP----EDVSITWGNRLYRTSPFVILSILYFFLFAWILLF 59 ++ ++L + +SH +V ++ G Y + L IL L LL+ Sbjct: 7 VLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLW 66 Query: 60 AVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNE 119 + + K +KG L GL + A ++ S+ Sbjct: 67 TLISLPF-------RVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGI 119 Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREF---AVYSLYFE----SCRIGDLNS 172 L V++A A A + + + T L + + D + Sbjct: 120 ALAS--AVRVADARDDEAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINALDSAN 177 Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 AQ + L + A A L ++ A + L Sbjct: 178 AQPLPARGLLLRTHA----------LAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATL 227 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICA-AKSLISQNKKRKAEVILEKIWKVNP 291 + + + + + E+L + A + A A+ + A LE+ Sbjct: 228 AEQTLLQASDANALAERWEALPKTLRTTPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQW 287 Query: 292 HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLA 351 + +Y L E + A R +S L+ ++++A QA A Sbjct: 288 DESLVRLYGVLPLEKYDSRRASAQRWLTQYPDSPGLLLTLARLARHQQQWSQAEEFLHRA 347 Query: 352 M 352 + Sbjct: 348 I 348 >gi|292493729|ref|YP_003529168.1| thioredoxin [Nitrosococcus halophilus Nc4] gi|291582324|gb|ADE16781.1| thioredoxin [Nitrosococcus halophilus Nc4] Length = 287 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 55/134 (41%), Gaps = 8/134 (5%) Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEK--- 285 L+ ++ G H ++ ++ + + S+ A +L+ Q K KAE +L+ Sbjct: 119 LLEQAQTALAAGQEEQGLHLLHKAAEIDPENYLVSVALAGALLKQGKMTKAEQMLKALPL 178 Query: 286 -IWKVNPHP-EIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV-SKIALEMGSID 342 + P +A I L+E RL + N E E+ ++ ++ AL G Sbjct: 179 EVRGEEPASGLLAQIEFATLTEKAPDIHSLKQRL-KANPEDSEARYLLGAQQAL-AGDYQ 236 Query: 343 QAHAKAMLAMKIAP 356 A + M+ +K P Sbjct: 237 DALEQFMVLLKQNP 250 >gi|220904159|ref|YP_002479471.1| hypothetical protein Ddes_0886 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868458|gb|ACL48793.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 207 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 53/180 (29%), Gaps = 35/180 (19%) Query: 130 ALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 A A+ + L + R D +A+ A+ SP Sbjct: 17 AEIAENEQCANHYYNL-------------GLALLTKR--DFIAAEEAFLNAVRNSPHLAE 61 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA---ILLIARSLENADKGDMIASY 246 + + + L+ + +E RA + + + +G+ + Sbjct: 62 GYVQLGGICLERGD-------LDGCLRYNEEATNCRAKFPVPWSNIAFVHLQRGEPDKAI 114 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKR----KAEVILEKIWKVNPHPEIANIYTHL 302 ++LK N + A A + + + + I++K P A + +L Sbjct: 115 TALNKALKWDPNFVQAQNALATAYFMKGDIKACEAQCLSIIKKE------PAFAPAWNNL 168 Score = 38.4 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 8/147 (5%) Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD-- 186 L +R + A E ++ L GDL+ RY +A + Sbjct: 35 ALLTKRDFIAAEEAFLNAVRNSPHLAEGYVQLGGICLERGDLDGCLRYNEEATNCRAKFP 94 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 PW A V + +AIT LN+ K + + + L A + KGD+ A Sbjct: 95 VPWSNIAFVHLQRGEPD--KAITALNKALKWDPNFVQAQNALATAYFM----KGDIKACE 148 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQ 273 + +K A A + Q Sbjct: 149 AQCLSIIKKEPAFAPAWNNLALAYFDQ 175 >gi|207722030|ref|YP_002252468.1| tpr domain protein [Ralstonia solanacearum MolK2] gi|206587204|emb|CAQ17788.1| tpr domain protein [Ralstonia solanacearum MolK2] Length = 266 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 83/226 (36%), Gaps = 27/226 (11%) Query: 173 AQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIAR 232 A+ A KAL I PD ++ + +W L Q A E N AI Sbjct: 17 AKMAARKALQIEPDLGEAYASLAHVRLHDWDWVG----LEQDFLRAIELNPGHAIAYYWY 72 Query: 233 SLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP- 291 + G + +S ++ + + + A L + +A L + +++P Sbjct: 73 AEYLMAAGRAEEAIARVRQSRQMDPLNSVLNSSVAIILYLARRYDQAREELHQALEIDPN 132 Query: 292 ----HPEIANIYTHLLS-ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHA 346 H + +Y ++ + ++++A+ L S E+L +++ + A Sbjct: 133 HFLLHFRLGLVYQQQKLFDDAIAEMQKAVTLSGR---STEALTGLAQT-YAAADMRAAMQ 188 Query: 347 KAMLAMK-------IAPRKEIFLLLAQIEQANSHNTDKILYWTQSA 385 + + A++ + P +A++ + + ++ W + A Sbjct: 189 QIVDALENASEKHYVHPYN-----MARV-FGSLGDQEQTFGWLEKA 228 >gi|169796978|ref|YP_001714771.1| hypothetical protein ABAYE2977 [Acinetobacter baumannii AYE] gi|260555731|ref|ZP_05827951.1| tetratricopeptide repeat family protein [Acinetobacter baumannii ATCC 19606] gi|301511991|ref|ZP_07237228.1| hypothetical protein AbauAB05_10435 [Acinetobacter baumannii AB058] gi|301594463|ref|ZP_07239471.1| hypothetical protein AbauAB059_01590 [Acinetobacter baumannii AB059] gi|169149905|emb|CAM87798.1| conserved hypothetical protein; putative exported protein [Acinetobacter baumannii AYE] gi|260410642|gb|EEX03940.1| tetratricopeptide repeat family protein [Acinetobacter baumannii ATCC 19606] Length = 569 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 90/294 (30%), Gaps = 34/294 (11%) Query: 118 NEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYA 177 ++ L + + ALA A ++ + +L + DL +A A Sbjct: 44 DQALQQSMVAEFALAYDDIPTALHNYTVLAIKSNSTTIKQRALDV-ALEYNDLQAALNIA 102 Query: 178 TKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN------------- 224 T + P + + E+ A L++ K + Sbjct: 103 THWVVQEPKDVPALFYLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQD 162 Query: 225 RAILLIARSLENADKGDMIASYHDAIES---------------LKLCDNSIMASICAAKS 269 R +LL A I + +E+ L+ + A Sbjct: 163 REVLLTALRSSAEKDNPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANL 222 Query: 270 LISQNKKRKAEVILEKI---WKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVE 326 LI+ + + A K +K N +A + + L++ ++ E N + E Sbjct: 223 LIALSDQEGALKWYAKSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIESNPHAEE 282 Query: 327 SLVIVSKIALEMGSIDQAHAKAMLAMKIAPRK--EIFLLLAQIEQANSHNTDKI 378 +L I ++++ D+A + A + + L E+ + T K Sbjct: 283 ALFIAGLTSIDLKQYDKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKA 336 Score = 37.6 bits (86), Expect = 5.3, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 267 AKSLISQNKKRKAEVILEKIWKVNPH-PEIANIYTHLL---SENTVGKL-KRALRLEEIN 321 A+ L K+ A +L++ K P PE+ IY +L KL K +L ++ Sbjct: 389 AEILKKMGNKKAALNLLDEAIKNLPDDPEL--IYAEVLLLDPYTDRDKLDKTLKQLLQLE 446 Query: 322 KESVESLVIVS-KIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 S L + +AL+ + +A A A++ AP + L Sbjct: 447 PNSPTYLNAYAYTLALQNRRLKEARQYAEQALEYAPEQASIL 488 >gi|159483807|ref|XP_001699952.1| DnaJ-like protein [Chlamydomonas reinhardtii] gi|158281894|gb|EDP07648.1| DnaJ-like protein [Chlamydomonas reinhardtii] Length = 1509 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 11/102 (10%) Query: 196 QQYVLAKEWSRAITFLNQKKKNA-----------KEWNRNRAILLIARSLENADKGDMIA 244 + ++ AI L Q+ A+L RS + Sbjct: 851 DFRTAERWYTEAIDLLEQQLPGLGLSEQQAAALFPNLKTEVAVLYSNRSGARLMTSKPHS 910 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 + DA++++ L + A+ AA A ++E Sbjct: 911 ALADALKAMALDGKFLRAASRAATCHCRLGNFSAAHRVVETA 952 >gi|149178848|ref|ZP_01857428.1| Tetratricopeptide repeat protein [Planctomyces maris DSM 8797] gi|148842323|gb|EDL56706.1| Tetratricopeptide repeat protein [Planctomyces maris DSM 8797] Length = 757 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 11/141 (7%) Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVL-----AKEWSRAITFL 211 +Y L R G+ +A + +A +P P ++ + +W +AI + Sbjct: 534 LYFLADARERNGETEAAIKVNEEARQAAPKFP-----LLDYQHAWIYYHSHDWEKAIVQM 588 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K E + + S +G++ E L + + Sbjct: 589 QKFIKKYPEQKERVYQVKMMLSNTYVQQGEIGKGEAVLEEMLADDPENPSINNDLGYLYA 648 Query: 272 SQNK-KRKAEVILEKIWKVNP 291 Q K KAE ++ K P Sbjct: 649 DQGKNLEKAEKMIRIALKSEP 669 >gi|125574389|gb|EAZ15673.1| hypothetical protein OsJ_31084 [Oryza sativa Japonica Group] Length = 683 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 78/284 (27%), Gaps = 38/284 (13%) Query: 107 HSYVSQQHTFHNEYLVYLLEVQIALAE--RQYNIAHEKLEMML--QIPATREFAVY-SLY 161 H+ N+ LL E + + A + L + P R + L Sbjct: 250 HAGSLLAAAGDNDDTAVLLAAFADFEERCGEPDRARAIYQHALRGEPPEPRAEELREKLL 309 Query: 162 FESCRIGDL--------NSAQRYATKALDISP--DAPWVTEAVVQQYVLAKEWSRAITFL 211 R GD + +A+ +P W +++ + +R Sbjct: 310 SLEKRFGDRHGVEDSIVTKRRSQYERAVTTNPLCYDAWFDLIRLEESANTGDANRIRDLY 369 Query: 212 NQKKK---------NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD----N 258 + + W R + + E D D+ + E L+ + Sbjct: 370 RRAVANVPPAAAAAEKRHWRRYIYLWINYALFEELDAEDVARARGVYRECLRTIPHKKFS 429 Query: 259 SIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEI------ANIYTHLLSE-NTVGKL 311 + AA+ I A +L V P P++ Y L + + Sbjct: 430 FSNICVMAAELEIRDKNLAAARRLLGNAIGVAPRPKLSRSSHVWRSYAALEKKLGETDRA 489 Query: 312 KRALRLEEINKESVESLVI---VSKIALEMGSIDQAHAKAMLAM 352 + L ++ + ++ G +D+A + Sbjct: 490 RSVYDLAVSQPALDAPELVWTDYIQFEIDAGELDRARQLYERLL 533 >gi|119476379|ref|ZP_01616730.1| type 4 fimbrial biogenesis protein PilF [marine gamma proteobacterium HTCC2143] gi|119450243|gb|EAW31478.1| type 4 fimbrial biogenesis protein PilF [marine gamma proteobacterium HTCC2143] Length = 258 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 19/160 (11%) Query: 198 YVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 Y+ W A + K A E + + A + + +L + G+ + +++KL Sbjct: 48 YIRNGNWDAA----KRHLKTALEIDDSSAEVFLTMALVFQNTGEGDRAEEYYQKAIKLDP 103 Query: 258 NSIMASICAAKSLISQNKKRKAEVILE-----KIWKVNPHPEIANIYTHLLS-----ENT 307 S A A L S + +A LE ++ P Y +L EN Sbjct: 104 TSSRARNNYAVYLYSDRRYEEAVKQLELVVTDTLYDKRP-----AAYVNLGRSYMQLENL 158 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 V R +NK +V ++++ +MG ++ Sbjct: 159 VKAEDAFRRAYLMNKRNVSLRYQLAEVYYQMGDYPKSQQY 198 >gi|169778217|ref|XP_001823574.1| import receptor subunit tom-70 [Aspergillus oryzae RIB40] gi|83772311|dbj|BAE62441.1| unnamed protein product [Aspergillus oryzae] Length = 632 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 80/213 (37%), Gaps = 18/213 (8%) Query: 95 IAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATRE 154 AA + LA H+ +H L ++L ++ A + + + + T Sbjct: 397 AAADDFELAI-SHNKDDADIYYHRAQLHFIL--------GEFAEAAKDYQKSIDLDRTFI 447 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 ++ L ++G + SA +++ D P V + + + +S AI ++ Sbjct: 448 YSHIQLGVTQYKMGSVASAMATFRRSVKNFEDVPDVYNYYGELLLDQQNFSEAIEKFDKA 507 Query: 215 KKNAKEWNRN--RAILLIARSLENAD-KGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 + K+ + LI ++L K D + + ++L + +A A+ L+ Sbjct: 508 VEMEKQSKPMGINVLPLINKALALFQWKHDFQEAENLCQKALIIDPECDIAVGTMAQLLL 567 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 Q K +A E+ E+A +++ Sbjct: 568 QQGKVSQALKYFERA------AELARTEAEIIN 594 >gi|332712129|ref|ZP_08432057.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L] gi|332348935|gb|EGJ28547.1| putative NTPase, NACHT family protein [Lyngbya majuscula 3L] Length = 1342 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 34/284 (11%), Positives = 104/284 (36%), Gaps = 19/284 (6%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMML----QIPATREFAVYS 159 R+ + + + LL+ ++A ++ + + +E + P T Sbjct: 912 RRTAICQLAKGYQDHPDTLPLLK-KLARSDNDWKVRATAIEQLAKGYKDHPDTLPL---- 966 Query: 160 LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAK 219 L + D + + A + L T A++Q++ + S ++ Sbjct: 967 LKKLARSDKDSSV-RVTAIEQLAQGYKDHRDTLALLQKWARSDNDSSVRFTAIKQLAQGY 1025 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + +R+ LL + ++D + + + +++ +A+S + + +A Sbjct: 1026 KNHRDTLPLLQESARSDSDSWVRGKAIEQLAQGYQDHPDTLAILQESARSDTDSDVRGEA 1085 Query: 280 EVILEKIWKVNPHPE-IANIYTHLLSENTVG-KLKRALRLEEINKESVESLVIV---SKI 334 L K ++ HP+ +A + S++ + +L + ++ ++L ++ ++ Sbjct: 1086 IEQLAKGYQD--HPDTLAILQESARSDSDSDVRGTAIKQLAKGYQDDPDTLPLLQQSARS 1143 Query: 335 ALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKI 378 + +A + + P LL + +++ + ++ Sbjct: 1144 DTDSDVRGKAIQQLAQGYQDHPD--TLPLLQEYARSDKDSDVRV 1185 >gi|298707953|emb|CBJ30324.1| PsbB mRNA maturation factor Mbb1 [Ectocarpus siliculosus] Length = 831 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 83/284 (29%), Gaps = 19/284 (6%) Query: 124 LLEVQIAL--AERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 LL Q + Y A +++ L + +I + AQR L Sbjct: 346 LLSYQAKQKNMKGNYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGL 405 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 + D P++ +A ++A+T LN+ + E +A L N Sbjct: 406 ENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPE----HTASWVALGLLNERNKR 461 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY-- 299 + + + + + A + A A + KVN P A +Y Sbjct: 462 IDEARGCFQTATRNDPRNHYAWLVWAMLEKRIGSIDVAREKFKMCLKVN--PRNAKVYQA 519 Query: 300 ---THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM--GSIDQAHAKAMLAMKI 354 + + E ++ + ++ + +E G+ D A + A+ Sbjct: 520 WGVLEASEGSIALATELFRAGLEQRPDN--TYIMQAWALMEAKQGNTDAAISLFKEAILK 577 Query: 355 APRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD--PLWIS 396 PR + + + P P W + Sbjct: 578 RPRDGAVWQAYALLLKDMGDVAGARALFSKGTTQSPKHCPTWQA 621 >gi|227823431|ref|YP_002827404.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234] gi|227342433|gb|ACP26651.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234] Length = 295 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 11/187 (5%) Query: 85 YKALY-TGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYL--LEVQIALAERQYNIAHE 141 Y+A GL+ + A ++ Q ++ ++ + L Q + +N ++ Sbjct: 113 YQAYANRGLVHRNMGDQQAALSDYNAALQLNSSYDVAYIGRGNLYRQANQLDNAFNDFNK 172 Query: 142 KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 +++ P R + L +++ D A + A+ +SP + YV Sbjct: 173 AIQLDTTDP--RAYHNRGLIYQA--RNDHAHAIEDFSTAISLSPSSAEPYNGRGISYVAQ 228 Query: 202 KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIM 261 + A + N N A ++L +G+ + +L+L Sbjct: 229 GDDDNAFSDFNTAI----NLNGKLAESWANQALIYERRGEKAKAQKSYSHALQLDPKYEP 284 Query: 262 ASICAAK 268 A A+ Sbjct: 285 ARAGLAR 291 >gi|148258690|ref|YP_001243275.1| hypothetical protein BBta_7517 [Bradyrhizobium sp. BTAi1] gi|146410863|gb|ABQ39369.1| hypothetical protein BBta_7517 [Bradyrhizobium sp. BTAi1] Length = 703 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 67/239 (28%), Gaps = 7/239 (2%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 + + A +L +L G ++A +AL P Sbjct: 149 ALALTRQGRLAEAEAAYRALLDHDPAHPDGWRALAHVLADQGRYDAAVPAYRQALAAQPA 208 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASY 246 + ++ + ++ A + + + A L+ +L + G + Sbjct: 209 DAGLHVSLGDVLYKQRAFADAAR--HYRLAAELAPDDANAARLLGHALH--EAGRATEAI 264 Query: 247 HDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSEN 306 ++ L ++ A L + A E + P A+ ++ E Sbjct: 265 DAYRRAVALDPTDVVVLSNLAACLCGAGQLEAAAAACEHALALQPDHAPAHTNLGIIHEK 324 Query: 307 TVGKLKRA---LRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 R + + ++ G ID A A + A+ +AP + Sbjct: 325 RGEIDAAVSAHRRAIAADPAYAKGHANLAVALRNAGDIDAALAASHRAVALAPDNALAR 383 Score = 37.6 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 56/173 (32%), Gaps = 5/173 (2%) Query: 104 RKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 H ++ + + LL + A + + + T + +L Sbjct: 229 AARHYRLAAELAPDDANAARLL-GHALHEAGRATEAIDAYRRAVALDPTDVVVLSNLAAC 287 Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNR 223 C G L +A AL + PD + + E A++ + + + Sbjct: 288 LCGAGQLEAAAAACEHALALQPDHAPAHTNLGIIHEKRGEIDAAVSAHRRAIAADPAYAK 347 Query: 224 NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 A L ++ + GD+ A+ + ++ L ++ +A A L+ Sbjct: 348 GHANL----AVALRNAGDIDAALAASHRAVALAPDNALARYNHAHFLLMCGDL 396 >gi|78213860|ref|YP_382639.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605] gi|78198319|gb|ABB36084.1| hypothetical protein Syncc9605_2352 [Synechococcus sp. CC9605] Length = 400 Score = 39.5 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 10/200 (5%) Query: 163 ESCRIGDLNSAQRYATKA-LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN--AK 219 E D R A +A L P P+ + + + + +AI L K Sbjct: 174 ELLAGSDKADRLRQAMEADLQERPGDPYASAKLGGLLISEGKTDQAIPLLQSGLKQCGKA 233 Query: 220 EWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKA 279 + R +L + +L +D ++ Y A+E S+ A + A L+ Q +A Sbjct: 234 DAERYELLLHLGLALAPSDPVQAVSCYRQALEIPLDTRVSLGARLNLAARLMEQGNLEEA 293 Query: 280 EVILEKIWKVNPHPEIANIYTHL-----LSENTVGKLKRALRLEEINKESVESLVIVSKI 334 + + PE+A + +L + L+ R ++ + E + Sbjct: 294 ISLTQTA--AQRAPEVALAWYNLGLMQRRRGDLAAALEAYGRALALDPNNAECHQNNAVA 351 Query: 335 ALEMGSIDQAHAKAMLAMKI 354 L G+ID A + + A+K+ Sbjct: 352 QLLGGNIDAARSSFIRAIKL 371 >gi|293410964|ref|ZP_06654540.1| conserved hypothetical protein [Escherichia coli B354] gi|291471432|gb|EFF13916.1| conserved hypothetical protein [Escherichia coli B354] Length = 1093 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQGNARLQREKLLRD 632 >gi|198284425|ref|YP_002220746.1| sulfotransferase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666205|ref|YP_002427093.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248946|gb|ACH84539.1| sulfotransferase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518418|gb|ACK79004.1| TPR domain/sulfotransferase domain protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 762 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 98/319 (30%), Gaps = 52/319 (16%) Query: 91 GLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIP 150 GL+ +A P A + + + LV L + + A L+ L Sbjct: 123 GLLLLACQRFPEAERAFREALARSPECLDCLVQL--GVTLAQQGRQEDARVLLDKALDTD 180 Query: 151 ATREFAVYSLYFESCRIGDLNSAQRYAT---------------------------KALDI 183 A++ + GD A+ +A +I Sbjct: 181 PNHAVALHHRNMLALATGDHCGAEALFRRRMHLYGENPSLLIGLGIALQEQGRLTEAEEI 240 Query: 184 SPD-------APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLEN 236 V + Q V + A ++ + + + R L Sbjct: 241 FRRTADTYSVHADVGHYIFQNLVAQQREREAEAYIRSAIADHPQSHSLRYPLGTL----L 296 Query: 237 ADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP----- 291 +G + + +L L + + A I + ++L +A + ++ P Sbjct: 297 FQQGRYPETLEVLLHTLNLKPDHVDALILSGRALFQLKYVDEAVETFHRALELLPESADA 356 Query: 292 --HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 H ++ H+ T + +L E ++ +LV ++ ++G ++ A Sbjct: 357 QFH--LSVALIHMGECRTAEGM--IRKLLENQPDNAAALVNLAICLEKLGEVEAAETTLR 412 Query: 350 LAMKIAPRK-EIFLLLAQI 367 A +AP + + LA+I Sbjct: 413 KAGNLAPTDLRVRVALAEI 431 >gi|170739041|ref|YP_001767696.1| TPR repeat-containing protein [Methylobacterium sp. 4-46] gi|168193315|gb|ACA15262.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium sp. 4-46] Length = 667 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 49/195 (25%), Gaps = 29/195 (14%) Query: 126 EVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISP 185 + A A L A++ L G + + +A + P Sbjct: 10 QAVAAHQSGNLAQAETLYRAFLTREPNHPVALHLLGTLLHARGRTGAGLPFLERAAALLP 69 Query: 186 DAPWVTEAVVQQYVLAKEWSRAITFLNQKKK----------------------------- 216 V + ++ A L++ Sbjct: 70 LDAEVHNNLGVALNHLGRFAEAARALDRAVSLVPDDAAAQSNLGAAYRGLHRFAEARGCF 129 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 R A + L D G+ + + +L A + A +L++ + Sbjct: 130 ARALALRPDAGVASNLGLALLDLGEGEEAAACFRRATELDPAFAQAHVHLASTLLALGRL 189 Query: 277 RKAEVILEKIWKVNP 291 +A +E ++P Sbjct: 190 PEALASIEAATALDP 204 >gi|70730340|ref|YP_260079.1| hypothetical protein PFL_2973 [Pseudomonas fluorescens Pf-5] gi|68344639|gb|AAY92245.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 1198 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 63/227 (27%), Gaps = 39/227 (17%) Query: 171 NSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLI 230 + YA L P+ + ++ + ++ +A L Q ++ + L Sbjct: 52 EVSASYAEVLLAAHPENNELRTQLLDLLIQLGDYPKAEKHLAQWQRPDPALKAYYRLQLD 111 Query: 231 ARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVN 290 A +L N+ + + + ++ A +S A Sbjct: 112 ALALNNSTDSAALQALAERFKAFDYKPLPSPQLERLATLALSAQAPGLA----------- 160 Query: 291 PHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA------LEMGSIDQA 344 A+ Y L + +R L E K S + A L+ +A Sbjct: 161 -----ADAYAELARRDPT---RREQWLPEAAKWYQASEQP-GRAADLYVQLLDASQTPEA 211 Query: 345 HAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 + + + L+A + + L A PD Sbjct: 212 RRQFLQ-------QAFTTLVAA----DRGDQAV--ELLARELAAQPD 245 >gi|78049196|ref|YP_365371.1| putative cellulose synthase operon protein C [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037626|emb|CAJ25371.1| putative cellulose synthase operon protein C [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 1509 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 72/251 (28%), Gaps = 53/251 (21%) Query: 85 YKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLE 144 ++ L + A ++ AR++ Q NE ++ + A A Sbjct: 357 WQQLQQAEAARARGDLAQARQLVEQAVQ--LLPNEPAGHVALGDV-QAAGDPVAAEASYR 413 Query: 145 MMLQIP---ATREFAVYSLY---------------------------------------F 162 L A + LY Sbjct: 414 KALSREADNAGALQGLVGLYSRQGRLQEASALFDRLPAAERAKSGGQALLRSNVQRARAR 473 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK-NAKEW 221 + GD SAQ A+ P W+ + + Y A +A + ++ + + Sbjct: 474 QFLDGGDAVSAQTELEAAMVERPGDAWIRLDLARLYQQAGRPDQARSVMDGLLAVHGDQP 533 Query: 222 NRNRAILLIARSLENADKGD------MIASYHDAIESLKLCDNSIMASICAAKSLISQNK 275 A L+A+ + A+ A+ L+ I A+ L++Q + Sbjct: 534 EALHANALLAQESGDWQDAYDSLDRIPSAARTPAMAQLR-ATAWIELQARQARQLVAQGR 592 Query: 276 KRKAEVILEKI 286 +A+ +L + Sbjct: 593 VGEAQQLLART 603 >gi|218706052|ref|YP_002413571.1| hypothetical protein ECUMN_2869 [Escherichia coli UMN026] gi|293405990|ref|ZP_06649982.1| yphG protein [Escherichia coli FVEC1412] gi|298381790|ref|ZP_06991389.1| yphG protein [Escherichia coli FVEC1302] gi|300898340|ref|ZP_07116688.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] gi|218433149|emb|CAR14045.1| conserved hypothetical protein [Escherichia coli UMN026] gi|284922499|emb|CBG35586.1| putative TPR-domain protein [Escherichia coli 042] gi|291428198|gb|EFF01225.1| yphG protein [Escherichia coli FVEC1412] gi|298279232|gb|EFI20746.1| yphG protein [Escherichia coli FVEC1302] gi|300358002|gb|EFJ73872.1| tetratricopeptide repeat protein [Escherichia coli MS 198-1] Length = 1093 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYF 162 A + + L+ + QY A E + ++ Y L Sbjct: 518 ATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLAR 577 Query: 163 ESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + R G+ ++ + ++L P V VL+ A + ++ Sbjct: 578 LAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQGNARLQREKLLRD 632 >gi|212275248|ref|NP_001130560.1| hypothetical protein LOC100191659 [Zea mays] gi|194689480|gb|ACF78824.1| unknown [Zea mays] Length = 558 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 41/188 (21%) Query: 56 ILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQ-- 113 I+L A+ R +KR G++ L ++A L R+ + S Sbjct: 360 IVLTALLRA---GETSAAWQTYKRMERAGFEVDGRALDTLARG---LCRRCATDASALGD 413 Query: 114 --------HTFHNEYL--VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE 163 +E + Y L Q + + A LE M++ Sbjct: 414 AEEVFGKVVASGHEPVSYTYCLMAQALARGGEVDAAVALLEDMVRK---------GYALR 464 Query: 164 SCRIGDLNSAQR---YATKALDI----------SPDAPWVTEAVVQQYVLAKEWSRAITF 210 D+ A A AL + P EA++ + W+ A+T Sbjct: 465 KRAYTDVVRALCDRGRARDALQVLVLVMIVRDFVPGRN-AFEALLGELSRQGRWADAMTV 523 Query: 211 LNQKKKNA 218 K Sbjct: 524 YAAAVKRG 531 >gi|309792538|ref|ZP_07687001.1| ATP-dependent DNA helicase RecQ [Oscillochloris trichoides DG6] gi|308225441|gb|EFO79206.1| ATP-dependent DNA helicase RecQ [Oscillochloris trichoides DG6] Length = 910 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 5/124 (4%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRY 176 + E L LL + + A E+ + AV L + GD +A+ Sbjct: 103 NQELLAGLLRGDLLHTQGDLEGATEQYRAVALRDLQGMAAVRRLAELALEQGDPEAARGQ 162 Query: 177 ATKALDISPDAPWV---TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARS 233 AL + PD + ++Q L + + A L + + + +R + + + Sbjct: 163 ID-ALMLRPDFTPSIADLQILLQAAELQADTTSA-EALRAQLADLELADRGKVLAELGMR 220 Query: 234 LENA 237 LE A Sbjct: 221 LERA 224 >gi|255037520|ref|YP_003088141.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] gi|254950276|gb|ACT94976.1| TPR repeat-containing protein [Dyadobacter fermentans DSM 18053] Length = 562 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 85/309 (27%), Gaps = 50/309 (16%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEM-- 145 L L++ N + + +E ++L I +++L+ Sbjct: 204 LAEMLIA----NDRIVEAVAPLEEALKINPDEAQAHVLLADIYRRNGDVQKCNQELKQVF 259 Query: 146 ----MLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + P R + ++N A A + + P+ T Sbjct: 260 ANPNLDADPKIRVLS--GYLTMLKTENEVNEAISLARQLSETHPNEAKATVIYADLLTRQ 317 Query: 202 KEWSRAITF-LNQKKKNAKEWNRNRAIL--------------LIARSLEN---------- 236 +++ A + + + AIL ++LE Sbjct: 318 SKFAEARDLYIKAAAADPNVFQVWGAILQLDGQLNQPDSMLVHSEKALELFPNQGMFWYF 377 Query: 237 -----ADKGDMIASYHDAIESLKLC---DNSIM-ASICAAKSLISQNKKRKAEVILEKIW 287 K + + ESLK+ + + K++ E Sbjct: 378 NGMANLMKKNFREATSALEESLKMMGENPQLVPLIHAQLGDAFNGIGDHEKSDAAYELAL 437 Query: 288 KVNPHPEIA----NIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQ 343 K +P+ + + + L E LK + +L + ++ + L + + + Sbjct: 438 KADPNNDHVLNNYSYFLSLRKEKLDLALKMSEKLVQQHQNNPTYLDTHAWVLYIRKDYKK 497 Query: 344 AHAKAMLAM 352 A AM Sbjct: 498 AKEYLEKAM 506 Score = 38.4 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 85/278 (30%), Gaps = 39/278 (14%) Query: 117 HNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFE-SCRIGDLNSAQR 175 + + L + +Y+ A + I F L + R +AQ Sbjct: 59 PQDATTHYLVATALIKLEKYDEAINASKKAFDIDKENIFYAQQLAELYAKRRKYAEAAQI 118 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQ--------------KKKNAKEW 221 Y + +P+ + YV ++ +AI N+ K++ Sbjct: 119 Y-ETLVARNPENIEYGIELAAVYVFNDQFDKAIETYNRLEKSMGVTEEITHQKQQLYLRQ 177 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAI----------------ESLKLCDNSIMASIC 265 N L + L A+ G++ A E+LK+ + A + Sbjct: 178 NNLEKALAEGKKLIEAEPGEVSYRVELAEMLIANDRIVEAVAPLEEALKINPDEAQAHVL 237 Query: 266 AAKSLISQNKKRKAEVILEKIWK-----VNPHPEIANIYTHLLSENTV--GKLKRALRLE 318 A +K L++++ +P + + Y +L + A +L Sbjct: 238 LADIYRRNGDVQKCNQELKQVFANPNLDADPKIRVLSGYLTMLKTENEVNEAISLARQLS 297 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAP 356 E + ++ VI + + +A + A P Sbjct: 298 ETHPNEAKATVIYADLLTRQSKFAEARDLYIKAAAADP 335 >gi|229822938|ref|ZP_04449008.1| hypothetical protein GCWU000282_00230 [Catonella morbi ATCC 51271] gi|229787751|gb|EEP23865.1| hypothetical protein GCWU000282_00230 [Catonella morbi ATCC 51271] Length = 422 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 4/156 (2%) Query: 121 LVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA 180 LV LE QI Q + L+ ++Q TR L GD + A+ Y Sbjct: 105 LVQWLEAQILFELGQVKACQKVLQNLIQTYPTRFEPYQLLAQAKIEEGDYSKAKDYYQ-- 162 Query: 181 LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN--QKKKNAKEWNRNRAILLIARSLENAD 238 + + + V A+++Q +LA + L Q + K+ A +L Sbjct: 163 VLLDYFSDKVDRALIRQRLLALALEDEMIQLEWIQSLVSWKDLPLVSAEDYYLLALAYQK 222 Query: 239 KGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 G + +Y A ++L L +S+ AA+ + Sbjct: 223 AGHLALAYEAAQQALALDLDSVDIHYLAAELALGLG 258 >gi|254522622|ref|ZP_05134677.1| cellulose synthase operon C domain protein [Stenotrophomonas sp. SKA14] gi|219720213|gb|EED38738.1| cellulose synthase operon C domain protein [Stenotrophomonas sp. SKA14] Length = 1193 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 47/332 (14%), Positives = 111/332 (33%), Gaps = 29/332 (8%) Query: 77 HKRNYDKGYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY 136 + ++ + + A + + ++ L + AL + Sbjct: 329 RQGRREQAITYFQRAVQATPAGDSNDKWRDLIASTRYWL-------QLDQADAALKAGRL 381 Query: 137 NIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQ 196 + A + AV L + GD +A+R A I+P+ V +VQ Sbjct: 382 DEAERLYAQARRQQPRDVNAVLGLVDVAVARGDDAAAERQLQSARRIAPNDANVVRKLVQ 441 Query: 197 QYVLA-----KEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIE 251 Y + + A+ +K A++ + + L R + GD + + Sbjct: 442 LYGRTDPQRLEAFINALPAAQRKL-YAEDLRQLQITRLRERREQALAAGDAATAIALGTQ 500 Query: 252 SLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANI-YTHLLSENTVGK 310 + L + ++++A+ ++ + + N A Y L + + Sbjct: 501 LRAELPEDAWLAYALGNELRAAGREQEADAVVADMARRN---GSAEARYAQALYLSGSDR 557 Query: 311 LKRALRLEEINK---ESVESLVIVSKIA--------LEMGSIDQAHAKAMLAMKIAPRKE 359 L +AL + + + + +++ E+ + + L ++ P + Sbjct: 558 LPQALAVLDALPQAQWDDDIRALSARLHRQQLTDHLWELRAQGREAEAIALLLQQPPSTD 617 Query: 360 IFLLLAQIEQANSHNTDKILYWTQSALHAMPD 391 +LLA+ + + + L++ Q L A PD Sbjct: 618 NDMLLAEWAR-LRGDHAQALHYYQRVLAAQPD 648 >gi|194896336|ref|XP_001978459.1| GG19598 [Drosophila erecta] gi|190650108|gb|EDV47386.1| GG19598 [Drosophila erecta] Length = 613 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 7/130 (5%) Query: 157 VYS-LYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKK 215 + L R + A A + P V + Y+ K + A N Sbjct: 348 LRGRLLISLERHKEAAEA---FRTAQTVVPYRFEVYRGLFHSYLAQKRFKEAHAICNWTL 404 Query: 216 KNAKEWNRNRAILLIARSL-ENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 + N R++ + R+L + D + A +SLK+ N A A + Sbjct: 405 R--IFRNSPRSLTMFGRTLFHSPDPKIKKTARKFAEKSLKIDPNYTPAVALMADICQLEG 462 Query: 275 KKRKAEVILE 284 + + +LE Sbjct: 463 ATQTSIKLLE 472 >gi|158522426|ref|YP_001530296.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3] gi|158511252|gb|ABW68219.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans Hxd3] Length = 686 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 11/201 (5%) Query: 159 SLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNA 218 L + GD + A Y ++AL++ PD A+ + ++ A+ + K+ Sbjct: 455 GLLL--IKGGDTDRAVPYFSRALEVKPDFFDARYALANVFFNKNDFENALNHYIRILKDR 512 Query: 219 KEWNR-NRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + A + A + + + +E+L L A L S+ + Sbjct: 513 ETAPAGLLADTHNDMGVIYAHRKKIDVAESHFLEALSLNPGLAAAHNNLGLLLSSRGETG 572 Query: 278 KAEVILEKIWKVNP-----HPEIANIYTHLLSENTVGKLKRALRLEEINKESVES-LVIV 331 +AE + P + +Y E RL +S S + Sbjct: 573 RAEDHFRSAMALTPGFLDAANNLVALYR--TQEKYAEAAGLLERLLAERPDSAASIAYNI 630 Query: 332 SKIALEMGSIDQAHAKAMLAM 352 + + A A+ Sbjct: 631 ACLYAVQNDRTAAIMWLERAL 651 Score = 37.2 bits (85), Expect = 6.9, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 77/245 (31%), Gaps = 33/245 (13%) Query: 166 RIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNR 225 + A T+AL I+P P + + + RA+ + ++ + ++ R Sbjct: 426 ERKNYACAHEQITEALRINPYLPQANYNMGLLLIKGGDTDRAVPYFSRALEVKPDFFDAR 485 Query: 226 AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICA------AKSLISQNKKRKA 279 A + +K D + + I LK + A + A + K A Sbjct: 486 ----YALANVFFNKNDFENALNHYIRILKDRET-APAGLLADTHNDMGVIYAHRKKIDVA 540 Query: 280 EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEM- 338 E + +N P +A N +G L + ++ S + ++ L+ Sbjct: 541 ESHFLEALSLN--PGLAAA------HNNLGLLLSSRGETGRAEDHFRSAMALTPGFLDAA 592 Query: 339 ----------GSIDQAHAKAMLAMKIAPR--KEIFLLLAQIEQANSHNTDKILYWTQSAL 386 +A + P I +A + + + + W + AL Sbjct: 593 NNLVALYRTQEKYAEAAGLLERLLAERPDSAASIAYNIACLYAVQN-DRTAAIMWLERAL 651 Query: 387 HAMPD 391 + D Sbjct: 652 SSGFD 656 >gi|148256897|ref|YP_001241482.1| SPINDLY family O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. BTAi1] gi|146409070|gb|ABQ37576.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family [Bradyrhizobium sp. BTAi1] Length = 739 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 7/194 (3%) Query: 70 AMLFHMLHKRNYDKGYKAL-YTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ 128 + ++ + K AL + + + A+ + + H + L +LL V Sbjct: 8 RAFQNARLQKKHRKQADALMPQAVAAYRSGRRAEAQAICGQILALLPDHVDAL-HLLGV- 65 Query: 129 IALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAP 188 AL Q ++A + L +++ A+ +L A++ +A+ + P+ Sbjct: 66 TALDGGQLDLAEQALAKAVEVDPRHAEALSNLGLALFSRKRFEEARKCQERAVTLKPNLV 125 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 + + A+ ++ ++ A R + + Sbjct: 126 VAQTGLGNTLMRLGRPDEAVAAHDRAIALKPDY----ADAYCNRGMALLTLNRNAEANQS 181 Query: 249 AIESLKLCDNSIMA 262 +L L + A Sbjct: 182 FDRALSLNPRHMEA 195 >gi|320105202|ref|YP_004180793.1| CheW protein [Isosphaera pallida ATCC 43644] gi|319752484|gb|ADV64244.1| CheW protein [Isosphaera pallida ATCC 43644] Length = 980 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 52/140 (37%), Gaps = 4/140 (2%) Query: 219 KEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRK 278 + R A + ++ KG + +Y +L++ + + A +L++Q++ + Sbjct: 58 PQRKRGYAEAYLTLGQDHLVKGRLDEAYKALRRALEIKSSLVEAQPALGFTLLAQDRAEE 117 Query: 279 AEVILEKIWKVNPHPEIAN---IYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIA 335 A V+L +W+ P A L++E R E N + E ++ + Sbjct: 118 ASVVLAALWESGFDPASALNGLGLLDLMAERLQDARDRFHEAAERNPQRPEPRSNLA-VC 176 Query: 336 LEMGSIDQAHAKAMLAMKIA 355 L D+ ++ Sbjct: 177 LAFQGRDEEARDLWNQLRTE 196 >gi|291240441|ref|XP_002740127.1| PREDICTED: super sex combs-like [Saccoglossus kowalevskii] Length = 575 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 8/116 (6%) Query: 125 LEVQIALAERQYNIAHEKL-EMMLQIPA--TREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L Q ++QY+ A E + M P T L + D+++A + K+L Sbjct: 448 LFAQALNDQQQYSQADEMFLKAMKLEPENPTTYV-HRGLLMLQWKQ-DVDTAVKLMKKSL 505 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENA 237 +I + E + V AI + + + L+ A Sbjct: 506 EIDDKCDFAYETLGTIEVQRGNLEHAIQLFEKAI---DLARTEMEMAHLYSLLDAA 558 >gi|270291291|ref|ZP_06197513.1| TPR repeat-containing protein [Pediococcus acidilactici 7_4] gi|270280137|gb|EFA25973.1| TPR repeat-containing protein [Pediococcus acidilactici 7_4] Length = 423 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 13/159 (8%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES---CRIGDLNSAQRYATKALDI 183 A ++ A E + T + L E ++ ++ AQ K +D+ Sbjct: 183 AASYAASGKFEKAIAYYEQIHDEDLTPDI----LMQEGITYLQLNEVQRAQTVLEKVVDM 238 Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 V ++ Y +EW + +T + A ++N + +L + D + Sbjct: 239 DSSYSSVYPYLIDAYRRDEEWDKGLTAAQEGL-AADQYNPDLYLLAAEMAEHAHDDELVE 297 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 A+E L ++ A I Q R AE + Sbjct: 298 KYLQKAVE---LAPDNQAAIIRITDFYNRQG--RYAETL 331 >gi|238752477|ref|ZP_04613953.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia rohdei ATCC 43380] gi|238709326|gb|EEQ01568.1| Type IV pilus bioproteinsis/stability protein PilW [Yersinia rohdei ATCC 43380] Length = 249 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 2/162 (1%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L LA+ A + LE + A + F RIG+ ++A++ +A+ Sbjct: 35 TRLQLGLEYLAQGDLKAARQNLEKAVAADPQDYRAQLGMAFYEQRIGENDAAEQRYQQAM 94 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++P V ++ A + + ++ A++ D Sbjct: 95 KLAPGNGTVLNNYGAFLCSLGQYVPAQQQFSAALLSPDYGQVADSLENAGYCFLRANQND 154 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVIL 283 + +LK + + A+ + + +A+++L Sbjct: 155 --QARVLLSRALKYDPDKGEPLLAEAQRHFGEGNRAQAQLLL 194 >gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP-6] gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP-6] Length = 440 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 14/172 (8%) Query: 133 ERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISP--DAP 188 + +Y+ A E + +++ T + G + A +A+ + P A Sbjct: 207 QGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLA--DQGKHDEAIEAYDEAIRLDPTDAAV 264 Query: 189 WVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHD 248 W + V V ++ AI ++ + A + + AD+G + Sbjct: 265 WGNKGV--SLVDQGKYDEAIEAYDEAIRLDPA----NAAAWGNKGVSLADQGKYDEAIEA 318 Query: 249 AIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYT 300 E+++L A SL Q K ++ ++ ++N P++A + Sbjct: 319 YDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIRLN--PDLAEPWI 368 Score = 38.0 bits (87), Expect = 4.0, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 8/156 (5%) Query: 133 ERQYNIAHEKLEMMLQIPATREF--AVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 + +++ A E + +++ T + G + A +A+ + P Sbjct: 241 QGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSL--VDQGKYDEAIEAYDEAIRLDPANAAA 298 Query: 191 TEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAI 250 ++ AI ++ + A + + S Sbjct: 299 WGNKGVSLADQGKYDEAIEAYDEAIRLDPT----DATAWFNKGNSLNKQKKYDESIKAYD 354 Query: 251 ESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 E+++L + I SL Q K +A ++ Sbjct: 355 EAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQAYDEA 390 Score = 37.6 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 81/232 (34%), Gaps = 15/232 (6%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + +Y+ A E + +++ T A ++ + + + + +A+ ++P Sbjct: 105 QGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWI 164 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + ++ AI ++ + + + AD+G + E+ Sbjct: 165 GKGKSLADQGKYDEAIEAYDEAIRLDPA----NVAAWGNKGVSLADQGKYDEAIEAYDEA 220 Query: 253 LKLCDNSIMASICAAK--SLISQNKKRKAEVILEKIWKVNPHPEIANIYTH-----LLSE 305 ++L A++ K SL Q K +A ++ +++P A ++ + + Sbjct: 221 IRLDPT--DAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTD--AAVWGNKGVSLVDQG 276 Query: 306 NTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 ++ ++ + + + G D+A A+++ P Sbjct: 277 KYDEAIEAYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPT 328 >gi|217978433|ref|YP_002362580.1| TPR repeat-containing protein [Methylocella silvestris BL2] gi|217503809|gb|ACK51218.1| TPR repeat-containing protein [Methylocella silvestris BL2] Length = 291 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 12/177 (6%) Query: 184 SPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMI 243 +P++ Y + ++ AI +Q K A A L R+L G Sbjct: 72 NPNSADAYNTRGVAYAKSGRYNEAIADFSQAIKIAPT-----AASLTNRALAYRQIGRND 126 Query: 244 ASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIY---- 299 A+ D ++ N A + A + A L+ K+N PE A + Sbjct: 127 AALTDFNSAIAADANHAPAYLGRANLERASGDLPAAHADLDSAIKLN--PENAQAFHARG 184 Query: 300 -THLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIA 355 + N + + + + + + + +G D+A A+ + Sbjct: 185 LIYQREGNHPQAITDFDNAIDRDPFAGAPYLARGQSLIAIGKYDKAIEDFNAALNVD 241 >gi|117923609|ref|YP_864226.1| hypothetical protein Mmc1_0293 [Magnetococcus sp. MC-1] gi|117607365|gb|ABK42820.1| Tetratricopeptide TPR_2 repeat protein [Magnetococcus sp. MC-1] Length = 789 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 58/195 (29%), Gaps = 4/195 (2%) Query: 168 GDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAI 227 G++N A A + PD P A+ Q+ A L Q + E Sbjct: 124 GEVNGALSCWAHAYRLQPDNPQPLRAMAQRLEQQGRIQEATEQLQQLAQMLPEDLDLLLH 183 Query: 228 LLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIW 287 L+ +E S A L+ Q +AE + + Sbjct: 184 LVGLLKQIGKHTAAEAYLRQRLVE----HPQSQPLRFALANLLMDQGNLAEAETLFRQNL 239 Query: 288 KVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAK 347 + ++ + L + + + ++ + L++G +D+A A Sbjct: 240 PDHLLSQLNLGVIYGRQGRYTEALHLFRHANAVTPNHLFTGYNLAVLCLQIGQLDEAQAL 299 Query: 348 AMLAMKIAPRKEIFL 362 A+ P++ Sbjct: 300 LEQAIAHHPQQVALR 314 Score = 36.8 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 38/137 (27%), Gaps = 9/137 (6%) Query: 120 YLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATK 179 L LL Q A L + + +Y R G A Sbjct: 217 ALANLLMDQ-----GNLAEAETLFRQNLPDHLLSQLNLGVIYG---RQGRYTEALHLFRH 268 Query: 180 ALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK 239 A ++P+ + + + + A L Q + + R L + + Sbjct: 269 ANAVTPNHLFTGYNLAVLCLQIGQLDEAQALLEQAIAHHPQQVALRNTLGQVYARQ-LKF 327 Query: 240 GDMIASYHDAIESLKLC 256 I +H A++ C Sbjct: 328 TQAIQCFHAALQQQPQC 344 >gi|327440766|dbj|BAK17131.1| FOG: TPR repeat [Solibacillus silvestris StLB046] Length = 414 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 11/185 (5%) Query: 111 SQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSL---YFESCRI 167 +E L+ + ++ ++ A E + I + + L E R Sbjct: 122 DALQILPHEPLLQFAKAELLFETGRFTEAVRIYEELYAIDK-KFAGII-LAQRLAEVYRA 179 Query: 168 GD-LNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRA 226 G +A Y +AL+ A + + + +++ AI L K+ ++ A Sbjct: 180 GAGYETALDYYMEALEEEVTADLLFGSAYAAF-QTEKYELAIKQLEDLKELDPDY--FAA 236 Query: 227 ILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKI 286 LL+A S + D + E LK + + A K I K+++A L + Sbjct: 237 YLLLAESYAMLE--DNERALKVIKEGLKRDEYDKSLYLFAGKMAIKNGKQQEAVEFLSEA 294 Query: 287 WKVNP 291 ++P Sbjct: 295 IALDP 299 >gi|288963191|ref|YP_003453470.1| TPR repeat-containing protein [Azospirillum sp. B510] gi|288915443|dbj|BAI76926.1| TPR repeat-containing protein [Azospirillum sp. B510] Length = 1246 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 69/228 (30%), Gaps = 39/228 (17%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 + G +A AL +P + + A +L + + Sbjct: 646 LQNGQSTAALSCGRAALACAPQHLAAMINQGTLLMQGQRPVEAALWLRRVVALDPAVWQA 705 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSI-------MASICAAKSLISQNKKR 277 +A LL A+ G A+ A +++ C + +A AA +L + R Sbjct: 706 QAALL----RVLAEAGQHSAAVEAAHAAMRRCPELLLWDRDALVAVFNAAVALYRRGDAR 761 Query: 278 KAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALE 337 A LE + + P L ++ K ++ + A++ Sbjct: 762 TALAALEMVGQAAP------------------------DLAQLKKALCACHHMLGQQAIQ 797 Query: 338 MGSIDQAHAKAMLAMKIAPR-KEIFLLLAQIEQANSHNTDK---ILYW 381 G + A++I P E+ +A +E + W Sbjct: 798 AGDLGTGRHHYGAALQIDPAIAELHAAMAGLEVKERPYAAARHSLRAW 845 >gi|149919872|ref|ZP_01908348.1| adventurous gliding motility protein AgmK [Plesiocystis pacifica SIR-1] gi|149819319|gb|EDM78752.1| adventurous gliding motility protein AgmK [Plesiocystis pacifica SIR-1] Length = 3612 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 1/165 (0%) Query: 84 GYKALYTGLMSIAAHNIPLARKMHSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEK 142 GY+ L + L S+ A + + + S + Y+ LL + A Sbjct: 3277 GYRELASQLASLLAEKLDDSDRAQSILESLLEVDPSYVPALLSLASVHEARGDEESMRTT 3336 Query: 143 LEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAK 202 LE + + + + + KAL + P + +++ + Sbjct: 3337 LERAAALEPQGPTGARLQLRLAMLTEEAEPRRAHLEKALSLDPANVEAGKQLLELSRSEE 3396 Query: 203 EWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYH 247 W + L K ++ R + L + A D+ + Sbjct: 3397 RWDQVAYLLEMAVSREKSDDKRRELQLERVDILVAKVQDIDGALR 3441 >gi|138894469|ref|YP_001124922.1| hypothetical protein GTNG_0799 [Geobacillus thermodenitrificans NG80-2] gi|134265982|gb|ABO66177.1| hypothetical protein GTNG_0799 [Geobacillus thermodenitrificans NG80-2] Length = 220 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 16/98 (16%) Query: 164 SCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA-----KEWSRAIT----FLNQK 214 + + A++ +AL + P+ +AV + ++ W +AI L Sbjct: 9 KLKKENYRKARKLFEEALRLDPE-----DAVCRYHLGHLELYDGWWHKAIRQFQLVLQST 63 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 KN + ++ RA+ A + GD + E+ Sbjct: 64 SKNLEPYHYIRALCSSAIAYNQL--GDPEKALRLLDEA 99 >gi|332306073|ref|YP_004433924.1| response regulator receiver protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173402|gb|AEE22656.1| response regulator receiver protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 547 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 66/172 (38%), Gaps = 12/172 (6%) Query: 214 KKKNAKEWNRNRAILLIARSLENADKGDMIAS-YHDAIESLKLCDNSIMASICAAKSLIS 272 + +K + + A+ + +++ D + IA+ + + A+ Sbjct: 120 NLRLSKAYQKRLALRSVYEAMQKNDTPEAIAACRRLIMSGTRYAKT---CCRLLAELYWK 176 Query: 273 QNKKRKAEVILEKIWKVNPHP----EIANIYTHLLSENTVGKLKRALRLEEINKESVESL 328 + +A+ +L + P P +A + + + ++ A+ + N E+ Sbjct: 177 AGEFTQAKHMLTPLLAQKPQPWVTIALAKTEMLMTNYDAA--IELAIDMCHRNPLLYEAQ 234 Query: 329 VIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLA-QIEQANSHNTDKIL 379 I+++ L + A A++IAP L+A +I + SHN + + Sbjct: 235 DILAQCYLLLRDYPNALIAIERAIEIAPYSVERQLIACKIAR-ESHNYEMVK 285 >gi|330996699|ref|ZP_08320577.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] gi|329572771|gb|EGG54404.1| tetratricopeptide repeat protein [Paraprevotella xylaniphila YIT 11841] Length = 297 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 10/163 (6%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 +A + + + R+ A++ +G + L + + + + Sbjct: 63 EKAERLFREAMRI-EPAQRSNAMIYYQIGRMQEHRGKPEKALESYTMGLNVAPHVLPLRM 121 Query: 265 CAAKSLISQNKKRKA----EVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRA--LRLE 318 AK + K KA +L+ WK + + + ++ + + + RA L Sbjct: 122 ARAKLYMQLGNKEKALVDYSDVLD--WKADEQEAL-FMRAYIYTGQRLYRRARADYEALL 178 Query: 319 EINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIF 361 ++N E+ + + + + +A + + AP I Sbjct: 179 KLNPAHEEARIGLVLLNEKDNRPREAMEQINAMVAAAPDHAIL 221 >gi|309784703|ref|ZP_07679336.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] gi|308927073|gb|EFP72547.1| tetratricopeptide repeat family protein [Shigella dysenteriae 1617] Length = 593 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 4/107 (3%) Query: 88 LYTGLMSIAAHNIPLARKMHSYVSQQ-HTFHNEYL---VYLLEVQIALAERQYNIAHEKL 143 L ++ + P A + ++ H + L+ + QY A E Sbjct: 474 LALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDF 533 Query: 144 EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWV 190 ++ Y L + R G+ ++ + ++L P V Sbjct: 534 WRAAWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEV 580 >gi|301117386|ref|XP_002906421.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4] gi|262107770|gb|EEY65822.1| RNA polymerase-associated protein CTR9 [Phytophthora infestans T30-4] Length = 1166 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 23/188 (12%) Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 P A + K++ + + L ++ + R+ +G Sbjct: 363 PYRDESATAT---NIARKDYDK-MFTLAGNAFHSTKIPEIRSESCYLMGRGCHAQGKYKD 418 Query: 245 SYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH-----PEIANIY 299 +Y + +L ++ A+ + + KA LEK K P + ++Y Sbjct: 419 AYSYYFNAGRLWPKFVLPWFGLAQMYYERKEFTKAASYLEKANKAYPENVEILSLLGDVY 478 Query: 300 THL-LSENTVGKLKRALRLEEINKESVESLVIVSKIA----------LEMGSIDQAHAKA 348 L + V L+R + LE +VE+L+ +++ + + S A Sbjct: 479 GKLGKKDEAVVLLRRVVELE---PGNVEALIGTAELLHGSPERKDQIIAISSYIAAEKVM 535 Query: 349 MLAMKIAP 356 A + P Sbjct: 536 NNASERVP 543 >gi|224826447|ref|ZP_03699549.1| type IV pilus biogenesis/stability protein PilW [Lutiella nitroferrum 2002] gi|224601548|gb|EEG07729.1| type IV pilus biogenesis/stability protein PilW [Lutiella nitroferrum 2002] Length = 209 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 3/112 (2%) Query: 169 DLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAIL 228 D ++ Q Y KAL + P P + + + + N A L Sbjct: 43 DGDAEQNY-QKALAMEPANPEANNNYGEFLCDHGRAQDGMGYFAKALANPLYDTPQTAYL 101 Query: 229 LIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 + R G + + +L++ N A A Q + A Sbjct: 102 NLGRCSALL--GQKAQANDYLLSALRVSPNYPPALKELAALHFGQGNAKLAA 151 >gi|220918570|ref|YP_002493874.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956424|gb|ACL66808.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 274 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 56/168 (33%), Gaps = 13/168 (7%) Query: 196 QQYVLAKEW-SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLK 254 + + W AI ++ E + + A + ++K + ++ + +L+ Sbjct: 19 GIELADRGWLDEAIKEFHKAI----ELDPSSAHAHDNLATVYSEKKLYREALNEYLTALR 74 Query: 255 LCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVG 309 L +S A A L + A V + ++ P HP+ + T Sbjct: 75 LEPDSATAHYNLASFLATHG-PDMAVVEYQDAIQLEPDHPDAHLNLGLTLAD--QGKTEE 131 Query: 310 KLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 +K E+ ++ + ++ G A A +++ P Sbjct: 132 AVKELGVAIELEPSDPFPRHELAGLLMDEGDYRAAIAHLKEVVRLEPS 179 Score = 38.4 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 80/247 (32%), Gaps = 31/247 (12%) Query: 158 YSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 + E G L+ A + KA+++ P + + + Y K + A+ + Sbjct: 18 RGI--ELADRGWLDEAIKEFHKAIELDPSSAHAHDNLATVYSEKKLYREALNEYLTALRL 75 Query: 218 AKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKR 277 + L + + + ++++L + A + +L Q K Sbjct: 76 EPDSATAHYNLASFLATH-----GPDMAVVEYQDAIQLEPDHPDAHLNLGLTLADQGKTE 130 Query: 278 KAEVILEKIWKVNP------HPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIV 331 +A L ++ P H E+A + + + + + + E+ + + Sbjct: 131 EAVKELGVAIELEPSDPFPRH-ELAGLLMD--EGDYRAAIAHLKEVVRLEPSNFEAELDL 187 Query: 332 SKIALEMGSIDQAHAKAMLAMKIAPR--------KEIFLL-------LAQIEQANSHNTD 376 + G +A A + P ++ L L + +A + + D Sbjct: 188 GICYAQKGFYAEAERAYARAAALKPDDLLLNYDVAALYALWGKPAPALEALRKALAQDAD 247 Query: 377 KILYWTQ 383 K+ W + Sbjct: 248 KVRDWLR 254 >gi|154496775|ref|ZP_02035471.1| hypothetical protein BACCAP_01068 [Bacteroides capillosus ATCC 29799] gi|150274027|gb|EDN01127.1| hypothetical protein BACCAP_01068 [Bacteroides capillosus ATCC 29799] Length = 348 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 24/256 (9%) Query: 119 EYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVY---SLYFESCRIGDLNSAQR 175 E + ++LE+Q AL+ ++ L+ L + A+ SL+ +A+ Sbjct: 73 ERIEHMLEMQEALSTEEFRQTEAFLKGKLGEKERKSDALRLLSSLFNHK-ADELRRAAEF 131 Query: 176 YATKALDISPDAPWVTEAVVQQYVLAK---EWSRA---ITFLNQKKKNAKEWNRNRAILL 229 YA +AL+++P + Q +W A ++ K N L Sbjct: 132 YAKEALELAPTVKENHNNL--QRAQEGTVPDWDWANHSRRIAYYQQFVGKNPNYLGGYLW 189 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE----VILEK 285 + LE + E+++ D+S K + +KAE +LE Sbjct: 190 L---LEELIADCRLEEAEKVWETVRQLDDSCRVPYYQGKIAWQRGDHQKAEAIWLRMLED 246 Query: 286 ---IWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSID 342 W + A Y + + KRA L + + ++ + + I G Sbjct: 247 YSGDWLAFANMADAMAYA-CRYDEAIRYYKRAQEL-QPSPRYTDAQMTAAHIYEIQGKYT 304 Query: 343 QAHAKAMLAMKIAPRK 358 +A ++I + Sbjct: 305 EAVESLKEQLEILKTE 320 >gi|115389426|ref|XP_001212218.1| hypothetical protein ATEG_03040 [Aspergillus terreus NIH2624] gi|114194614|gb|EAU36314.1| hypothetical protein ATEG_03040 [Aspergillus terreus NIH2624] Length = 712 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 22/195 (11%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPATREFA 156 A+ L + V+ + + ++ + + + A + L+M L + Sbjct: 365 ANENSLRKAQDIAVNMLRENNQDPDALMIRARALYGLGESDQAVKALKMCLGLDP----- 419 Query: 157 VYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 D+ A + ++ A AK++ +AI + Sbjct: 420 ------------DMKPAIKLLRTVQKLTRTKEEGNAAF-----KAKDYRKAIELYGEALA 462 Query: 217 NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 + +L R+ + + + +D E+L+L + A AK+ Sbjct: 463 VDPNNKDMNSKILQNRAQAYINLKEYDNAVNDCTEALRLDPSYTKAQKMRAKAHGGAGNW 522 Query: 277 RKAEVILEKIWKVNP 291 +A + + + NP Sbjct: 523 EEAVRDYKAVAEANP 537 Score = 36.8 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 14/126 (11%) Query: 96 AAHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQ----------IALAERQYNIAHEKL-E 144 A K + L VQ A + Y A E E Sbjct: 400 GLGESDQAVKALKMCLGLDPDMKPAIKLLRTVQKLTRTKEEGNAAFKAKDYRKAIELYGE 459 Query: 145 MMLQIPATREFAVYSLYFESCR---IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLA 201 + P ++ L + + + ++A T+AL + P + + + A Sbjct: 460 ALAVDPNNKDMNSKILQNRAQAYINLKEYDNAVNDCTEALRLDPSYTKAQKMRAKAHGGA 519 Query: 202 KEWSRA 207 W A Sbjct: 520 GNWEEA 525 >gi|94499171|ref|ZP_01305709.1| hypothetical protein RED65_10294 [Oceanobacter sp. RED65] gi|94428803|gb|EAT13775.1| hypothetical protein RED65_10294 [Oceanobacter sp. RED65] Length = 388 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 69/210 (32%), Gaps = 10/210 (4%) Query: 98 HNIPLARKMHSYVSQQHTFHNEYLVYLLEVQI--ALAERQYNIAHEKLEMMLQI-PATRE 154 + A +H + + + + L ++ A L +L+ + Sbjct: 74 GELDKAVSIHQSLFARPDLDKDLAGQVQFALASDYLQSGLFDRAERLLLDLLKTHQNMKS 133 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKA--LDISPDAPWVTEAVVQQYVLAKEWSRAITFLN 212 + L D S A++ + + Q + EW A ++++ Sbjct: 134 KVLDKLVVLYEEEQDWESILSLASEVKNFKNIKSVAYACCELADQSIKKHEWREAQSYID 193 Query: 213 QKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCD-NSIMASICAAKSLI 271 + K + LI + + ++G E+L+ + ++ Sbjct: 194 RALK----IDSKCIWALILEAKVHEEQGLPNKMVASLKEALQYDPAQLHVILPNLKETFE 249 Query: 272 SQNKKRKAEVILEKIWKVNPHPEIANIYTH 301 S+++ + E ILE++W +P P + Y Sbjct: 250 SRHRPHELEQILEELWIESPMPLSLHSYAE 279 >gi|86605655|ref|YP_474418.1| TPR repeat-containing protein [Synechococcus sp. JA-3-3Ab] gi|86554197|gb|ABC99155.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab] Length = 263 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 22/207 (10%), Positives = 58/207 (28%), Gaps = 21/207 (10%) Query: 122 VYLLEVQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKAL 181 L Q + +L+ A+ L ++ + A K + Sbjct: 52 TEQLRAQA-----------DGYRAVLEREPDNPIALRGLIDTQLQLNEPQGAIEPLKKLV 100 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGD 241 ++ P+ + + Q + A+ + + E + + +L + G Sbjct: 101 ELEPENRQLRAFLAQIQQDTGDLEGALE----QLQILHEKDPKDSQVLQELADVQLALGR 156 Query: 242 MIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP---HPEIANI 298 + LK + A + N+ KA + +++ +P P + Sbjct: 157 PSQAIELLENYLKEVPEDNDVRLRLAFIYVRNNQTEKAVALYDEMIAADPSDFAPVLGKA 216 Query: 299 YTHLLSENTVGKLKR---ALRLEEINK 322 + + + K + + Sbjct: 217 IALTSATDENLRAKAPELFEQAARLAP 243 >gi|323496841|ref|ZP_08101878.1| putative Zn-dependent protease [Vibrio sinaloensis DSM 21326] gi|323318100|gb|EGA71074.1| putative Zn-dependent protease [Vibrio sinaloensis DSM 21326] Length = 483 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 268 KSLISQNKKRKAEVILEKIWKVNP-HPEIANIYTH--LLSENTVGKLKRALRLEEINKES 324 I+Q + KA+ +LEK K +P +P + Y + + E L+ R N Sbjct: 348 DLYIAQKQADKAQQMLEKAMKASPNNPVLTINYANVLIKLEKNQEALRVLQRYTHDNPND 407 Query: 325 VESLVIVSKIALEMG--SIDQAHAKAMLAMKIA 355 V ++S+ + +G D A +LA+K Sbjct: 408 VNGWQLLSEANIHLGQSDEDLAARAEILALKAN 440 >gi|325107410|ref|YP_004268478.1| type II and III secretion system protein [Planctomyces brasiliensis DSM 5305] gi|324967678|gb|ADY58456.1| type II and III secretion system protein [Planctomyces brasiliensis DSM 5305] Length = 1546 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 51/337 (15%), Positives = 106/337 (31%), Gaps = 58/337 (17%) Query: 78 KRNYDKGYKALYTGLMSIAAHN---IPLARKMHSYVSQQHTFHNEYLVYLLEVQIALAER 134 R +G +++ N P A ++ + + + + L + A+ E Sbjct: 216 ARRQTQGQ------MLAGNTTNNDAAPAAPRVGIDPTSEQSAKQQSQSLLAAAEKAVQEG 269 Query: 135 QYNIAHEKLEMMLQIPAT-REFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 +Y+ A + Q+P T F + +S A++ V Sbjct: 270 RYDEARKLAGQADQLPVTYSLFDRRPEQILALIERASDSRMIVASEQKPQQASQAPVATT 329 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 V + V K + A +RN+A+ L+A + + +GD+ + ++ Sbjct: 330 VPEMPVSP----------EPKVETAAAQHRNQALNLLAEARDAVSRGDLATANQKVSQAQ 379 Query: 254 KLC---------DNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLS 304 + IMA I A + +++ A + P I + Sbjct: 380 QFDVTYTLFDDRPELIMAEINAVQKQQMLAQQQPAAAPAIGTVQAPP---IEAARAPMAG 436 Query: 305 ENTVGKLKRALRLEEI-------------------NKESVESLVIVSKI--ALEMGSIDQ 343 K L + N ++ ++++ AL G + Sbjct: 437 NTVAAKTAAQNTLAQNTAAPKDMTPAATAQPTAANNPAKSQAHALLAQSREALSKGEYEL 496 Query: 344 AHAKAMLAMKIAPRKEIF-----LLLAQIEQANSHNT 375 A KA AM+ ++F +LA+I++ Sbjct: 497 AREKARQAMQYDVTYDVFDVRPQQILAEIDRRGGSPA 533 >gi|298244175|ref|ZP_06967981.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM 44963] gi|297551656|gb|EFH85521.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM 44963] Length = 1298 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 47/296 (15%) Query: 134 RQYNIAHE------KLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKA------L 181 +Y A +A+Y L S + A+ Y +A Sbjct: 924 GRYIEAEACLRSSLAFHQQKGEAQDAAWALYELAVLSREEANFVQAEAYLEEAQLNFVQA 983 Query: 182 DISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADK-- 239 + W+ + + A+ Q K ++ R L Sbjct: 984 QDERGSLWLALVRGELQRGYGNYRPALELFEQAVKGLRQLKDQEGYAWALRDLGATKGAL 1043 Query: 240 GDMIASYHDAIESLKLCDNS----IMASICA--AKSLISQNKK-------RKAEVILEK- 285 G + D E+L+ DN A + A + + Q K R++ + + Sbjct: 1044 GYYTRALTDNEEALRTFDNLNMVGAQAWVLADRGEIYLHQGKLDAAQQQGRESLRLFQAQ 1103 Query: 286 ------IWKVNPHPEIANIYTHLLSENTVGKL---KRALRLEEINKESVESLVIVSKIAL 336 W + + + +L + ++ E+ V+ + A+ Sbjct: 1104 SMLRGEGWSLR----LLGNVARARGDVEHAQLYYNEALRIFASLSDRVDEARVLNALGAV 1159 Query: 337 --EMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQANSHNTDKILYWTQSALHAMP 390 G +A + A+ + + L+ AQ D W + A Sbjct: 1160 AYACGEYQEAQSYYEQALTRVQEQNVLLIEAQTLWGLG---DIARAW-RRFSEAEH 1211 >gi|283782175|ref|YP_003372930.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] gi|283440628|gb|ADB19070.1| TPR repeat-containing protein [Pirellula staleyi DSM 6068] Length = 1894 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 16/143 (11%) Query: 108 SYVSQQHTFHNEYLVY-LLEVQIALAERQYNIAHEKLEMM-LQIPATREFAVYSLYFESC 165 + T +E L L E+ AL + A + M P R E+ Sbjct: 448 AEKISDLTLPDEALWNGLFELDGALIKHDRAQAEVVYQAMCTSAPDDRLT------LEAR 501 Query: 166 RI---GDLNSAQRYA--TKALDISP---DAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 R D N A++ A K + P W A+++ ++ + + + Q++ Sbjct: 502 RRLAIYDANPAEQLAAVEKVFEQFPTSERIAWERLALLRYQTSREQRLQQLEAMAQREDA 561 Query: 218 AKEWNRNRAILLIARSLENADKG 240 + ++R A L+ + +AD Sbjct: 562 SPIFSRMLADELLQDARRHADAT 584 Score = 39.1 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 79/238 (33%), Gaps = 24/238 (10%) Query: 152 TREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFL 211 T+ + + + I + A PD +V +Q + + A+ Sbjct: 937 TQGVGLSAFAHAAQGILEPEELLAELQAARVARPDLAEAWSSVTEQLAQLERFDDALANA 996 Query: 212 NQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLI 271 Q + +L + + + D + +L+L A ++L Sbjct: 997 QQACERFPLS----ILLWTDLARVHRLRLDFDSESEALANALRLDPGHSTALEMMCEALA 1052 Query: 272 SQNKKRKAEVILEKIWKVNP-----HPEIANIYTHLLSEN-TVGKLKRALR--------- 316 + + A + ++ H +A + L + + L++A+R Sbjct: 1053 RKRDLQAACDLAKRATAHASLDYLNHTILAEQWWQLKEHDRAIEALRQAIRIEPGADRAW 1112 Query: 317 --LEEINKE--SVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQIEQA 370 L++ K+ E + +++ L +A + +LA + + LA IE+A Sbjct: 1113 GNLQQWAKDLGQPEIAIDIART-LTQSRPGEARSWHVLARILDGPQHSDESLAAIERA 1169 >gi|223937604|ref|ZP_03629507.1| TPR repeat-containing protein [bacterium Ellin514] gi|223893767|gb|EEF60225.1| TPR repeat-containing protein [bacterium Ellin514] Length = 310 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 66/197 (33%), Gaps = 32/197 (16%) Query: 196 QQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKL 255 ++ +++W +A KN WN + + G + ++ +++++ Sbjct: 121 DEHAASQQWEKAREL---DPKNGASWNN--------LANYYGEHGPVKKAFEYYSKAIEI 169 Query: 256 CD----------NSIMASICAAKSLISQNKKR---KAEVILEKIWKVNP-----HPEIAN 297 +++ A ++++ KA + ++ K++P ++A Sbjct: 170 DPVEPLYLSNFADTVSLFRKEAMVYYHLDEQQVFIKALGLYQQALKLDPKNFKLAQDLAQ 229 Query: 298 IYTHLLSENTVGKLKRALRLEEINKESVES---LVIVSKIALEMGSIDQAHAKAMLAMKI 354 Y + T L + + E + +++ L D+A + Sbjct: 230 TYYGIKPTPTDAALNAWTNVLNLAASDFEKQGVYLHLARFKLNANRFDEAREQLKDVTDE 289 Query: 355 APRKEIFLLLAQIEQAN 371 + ++ LL IE Sbjct: 290 SYQERKRSLLKNIEARQ 306 >gi|86606018|ref|YP_474781.1| photosystem I assembly protein Ycf3 [Synechococcus sp. JA-3-3Ab] gi|123751805|sp|Q2JUT9|YCF3_SYNJA RecName: Full=Photosystem I assembly protein ycf3 gi|86554560|gb|ABC99518.1| photosystem I assembly protein Ycf3 [Synechococcus sp. JA-3-3Ab] Length = 173 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 10/101 (9%) Query: 126 EVQIALAERQYNIAHEKLE---MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALD 182 + A +E +Y A E + Q R + +Y++ G+L+ A Y +AL+ Sbjct: 42 DGMAAQSEGEYAEALENYREALALEQDDEDRSYILYNMGLIYQSNGELDKALEYYHQALE 101 Query: 183 ISPDAPWV--TEAVV-----QQYVLAKEWSRAITFLNQKKK 216 ++P AV+ +Q + A + A ++ + Sbjct: 102 LNPRLCSALNNIAVLLHHKGEQSLQAGDEETAEALFDEAAQ 142 >gi|118581730|ref|YP_902980.1| hypothetical protein Ppro_3330 [Pelobacter propionicus DSM 2379] gi|118504440|gb|ABL00923.1| TPR repeat-containing protein [Pelobacter propionicus DSM 2379] Length = 1038 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 4/159 (2%) Query: 133 ERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTE 192 + A E+ + A L A AL ++P+ + Sbjct: 567 QGSAARAEERFRQAIGYDENNVDAYRCLGLLLNEQERYEEAAFLFATALSLAPNDCDLRR 626 Query: 193 AVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIES 252 + + ++ A + N + +L + + E ++ D+ + + Sbjct: 627 FLGDAHFGLGNYADAAHWYNNALSRRPD--DVEVLLNLGAASEVLNRFDVAEC--SLLRA 682 Query: 253 LKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP 291 ++L A + +SQN+ +AE +K + P Sbjct: 683 IELSPGDHRAYLNLGGVFLSQNRLEQAERYFQKALECKP 721 >gi|108805489|ref|YP_645426.1| TPR repeat-containing protein [Rubrobacter xylanophilus DSM 9941] gi|108766732|gb|ABG05614.1| TPR repeat [Rubrobacter xylanophilus DSM 9941] Length = 268 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 24/189 (12%) Query: 97 AHNIPLARKMHSYVSQQHTFHNEYLVYLLEVQIALA--ERQYNIAHEKLEMMLQIPATRE 154 + ++ A + + F E LE Q +L + + A + L ++ Sbjct: 40 SGDLRGAMEASRLAVRLDPFDAEA----LEAQASLLQQQGRSEEALDALRQAVERDPNNY 95 Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 L +G A+ + L+++P A + + Q + E +A + Sbjct: 96 LPHLILGNLQLSLGRFEEAEESYREVLELNPRASAASTGLAQALIRQGELEKAREIYER- 154 Query: 215 KKNAKEWNRNRAILLIARSLENA--DKGDMIASYHDAIESLKLCDNSIMASICAAKSLIS 272 R L L G+ Y + + + AA L Sbjct: 155 -----LAQRREITYLGLYDLGRLCVRTGEPEKGYRYIMRARRQ----------AAAGLDR 199 Query: 273 QNKKRKAEV 281 + +AE Sbjct: 200 LDGPARAER 208 Score = 37.2 bits (85), Expect = 5.9, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 10/119 (8%) Query: 127 VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPD 186 Q + + + A E E + Q +Y L R G+ RY +A + Sbjct: 136 AQALIRQGELEKAREIYERLAQRREITYLGLYDLGRLCVRTGEPEKGYRYIMRARRQAA- 194 Query: 187 APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIAS 245 + A+ I ++ +A A R+ + + D + Sbjct: 195 ---AGLDRLDGPARAER-RELIESMDLALADALVVQGEYA-----RARQIIAQSDSEQA 244 >gi|328698735|ref|XP_003240719.1| PREDICTED: transmembrane and TPR repeat-containing protein CG4341-like [Acyrthosiphon pisum] Length = 822 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 71/246 (28%), Gaps = 30/246 (12%) Query: 133 ERQYNIAHEKLE-MMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVT 191 + + + A L + P + Y+L GD +A A+ P Sbjct: 494 QGRLDEAETALRTALRYRPNMADV-HYNLGNLLREKGDAEAAVSSYKNAIKYRPSLAVAY 552 Query: 192 EAVVQQYVLAKEWSRAITFLN-------QKKKNAKEWNRNRAILLIARSLENADKGDMIA 244 + Q A + L K+ +R L+ +AD+G Sbjct: 553 LNMGQLLATMGRCEEAESVLKLCSSLDGSHSKDPVNHETSRVSALVTLGKLHADRG---- 608 Query: 245 SYHDAIESLKLCDNSIMASI-------CAAKSLISQNKKRKAEVILEKIWKVNP-----H 292 Y DA+++ K + +L N+ R+AE+ + V P H Sbjct: 609 RYSDAVQAYKHAVTILPPYYNSRVLFSLYGDALAQLNRHREAEMWHKAALAVGPDHVPAH 668 Query: 293 PEIANIYTHLLS--ENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAML 350 + RA +L LE +A ++ + Sbjct: 669 LSYGKWLAKNRTRIHEAENWFLRAKKLA---PGDASVYKHFGVFLLEQERYPEAASQLVE 725 Query: 351 AMKIAP 356 A+ + P Sbjct: 726 AVALEP 731 >gi|320108094|ref|YP_004183684.1| hypothetical protein AciPR4_2930 [Terriglobus saanensis SP1PR4] gi|319926615|gb|ADV83690.1| hypothetical protein AciPR4_2930 [Terriglobus saanensis SP1PR4] Length = 2033 Score = 39.5 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 64/180 (35%), Gaps = 16/180 (8%) Query: 196 QQYVLAKEW-SRAITFLNQKKKNAKEWNRNRAILLIARSLE-------NADKGDMIASYH 247 V + W + + + ++ + +A++ + G+++ + Sbjct: 182 DLEVARESWRAGNRREAQEAVERYRQPQAWDLLAGLAKASVCRTEAQIALEDGEVVQARR 241 Query: 248 DAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHLLSENT 307 E+ + A L ++N++++A+++L+ V A + L + Sbjct: 242 LLDEARSHNPDLTP--RLEALVLRAENRRKEAQLLLQASLDVENISLYAALSLELGEVDE 299 Query: 308 VGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFLLLAQI 367 +L + E+ ++ + + L G A + A++I+P + A I Sbjct: 300 T-----LAKLVGLA-ETSDTHRLRALAYLLKGERGSASDEIEKAIEISPSWTVNRHAAAI 353 >gi|154252475|ref|YP_001413299.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1] gi|154156425|gb|ABS63642.1| TPR repeat-containing protein [Parvibaculum lavamentivorans DS-1] Length = 205 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 8/156 (5%) Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQY-NIAHEKLEMMLQIPATREFAVYSLY 161 A +M + + + L + E + A + + P+ L Sbjct: 36 AAEMAAGEETREAVLDSLFERLRTAK-DETEGRAVESAIQSFWLQSGSPSIDLLMQRGL- 93 Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 ++ D + A Y + + +SP + + +++S A+ + Q + Sbjct: 94 -DALHEQDYDRAHFYFDEVVVLSPGFAEGWNKRATIHYIREDYSSALRDIEQTLR----L 148 Query: 222 NRNRAILLIARSLENADKGDMIASYHDAIESLKLCD 257 L + + GD + +L L Sbjct: 149 EPRHFEALAGLGILLEELGDKKGALDAYRRALALNP 184 >gi|186471657|ref|YP_001862975.1| TPR repeat-containing protein [Burkholderia phymatum STM815] gi|184197966|gb|ACC75929.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia phymatum STM815] Length = 847 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 46/159 (28%), Gaps = 4/159 (2%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEA 193 + A + +++ + +L G + A + A+ ++P + + Sbjct: 543 GKMQEAAAEYRTAIRLDPSDAEPHNNLGLLLKDEGRGDEAMEHFRTAIALAPTLGELHNS 602 Query: 194 VVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESL 253 + + AI Q + A +G + + + +E+ Sbjct: 603 LGGLWEDRGRSDLAIEEYRQAIRLQP----RNAGAHNNLGNIWRKEGRLDEAAAEYLEAQ 658 Query: 254 KLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNPH 292 +L + + + A +++PH Sbjct: 659 RLAPDLGEPHTGLGDVWDALGRLEDAISEYHAAIRLDPH 697 Score = 37.6 bits (86), Expect = 5.3, Method: Composition-based stats. Identities = 23/210 (10%), Positives = 58/210 (27%), Gaps = 14/210 (6%) Query: 155 FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQK 214 A L E + +A +A+ + A+ AI + Sbjct: 291 VAHVGLGREWHSLMQNATALSEFREAILLDSGYSRAHTALADVLEETDRTDEAIAEYHIA 350 Query: 215 KKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQN 274 +A L ++ + + + + +L A +S Sbjct: 351 MAHAPMDEVPHVGL---GNILHHRMHKESEALAEYQMASRLAPKEAPPHHGIAHVWVSLG 407 Query: 275 KK-------RKAEVILEKIWKVNPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVES 327 + R+A + + + H ++ + L ++ + Sbjct: 408 ELDHAIAEYRQAISLDVT--QASTHSDLGEALRRQKKFDEA--LAEFRTAMYLDPDMSGP 463 Query: 328 LVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 I + G+ + A A+ + A+++ P Sbjct: 464 HTATGAILYDEGNREDARAEYLTALRLDPT 493 >gi|83595013|ref|YP_428765.1| sulfotransferase [Rhodospirillum rubrum ATCC 11170] gi|83577927|gb|ABC24478.1| Sulfotransferase [Rhodospirillum rubrum ATCC 11170] Length = 542 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 13/169 (7%) Query: 200 LAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNS 259 A + A+ L Q + + +R L ++ A KGD+ + A +++L Sbjct: 47 AAGQAEAAVKALGQAVRLDPDNATHRGNL----AMLLARKGDLAGAIDHARAAVRLAPKD 102 Query: 260 IMASICAAKSLISQNKKRKAEVILEKIWKVNPHPE---IANIYTHL---LSENTVGKLKR 313 + A+ LI+ R+AE + P IA L + R Sbjct: 103 GALRLRLARLLIAAGHPREAEAEALDATRRLPREAASWIALAGARLLDQRPNDAEAPSAR 162 Query: 314 ALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPRKEIFL 362 AL L E+L + + + L +G + +A A A LA+K P L Sbjct: 163 ALALA---PNDAEALSLRTDLLLSLGRLAEAEATARLALKRQPTSLAAL 208 >gi|83854858|ref|ZP_00948388.1| TPR domain protein [Sulfitobacter sp. NAS-14.1] gi|83842701|gb|EAP81868.1| TPR domain protein [Sulfitobacter sp. NAS-14.1] Length = 572 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 7/165 (4%) Query: 165 CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRN 224 R A + P V A+ + AI ++ + + N Sbjct: 337 RRSNKPEQAIEVLQQLTRSHGTLPSVHSALGDALRAQDNFKAAIKSYDRAIELTPDSNPQ 396 Query: 225 RAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNK-KRKAEVIL 283 R +L AR + G+ AS D +LK+ + SL+ Q + +A ++ Sbjct: 397 RWVLYYARGIAEERSGNGEASERDFRAALKINPDQPQVLNYLGYSLVEQGRNLDEALNMI 456 Query: 284 EKIWKVNPHPEI------ANIYTHLLSENTVGKLKRALRLEEINK 322 E+ +P +Y E V +++RA+ L ++ Sbjct: 457 ERAVAASPESGYIVDSLGWVLYRLGRYEEAVDQMERAVELVAVDP 501 >gi|46136665|ref|XP_390024.1| hypothetical protein FG09848.1 [Gibberella zeae PH-1] Length = 521 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 54/180 (30%), Gaps = 16/180 (8%) Query: 107 HSYVSQQHTFHNEYLVYLLE-VQIALAERQYNIAHEKLEMMLQIPATREFAVYSLYFES- 164 S +S Q + + LL Q L+ + + A + + T ++ + Sbjct: 19 ASALSPQDIPADLPVAQLLTSAQSHLSRGETDEALVYYDAAIARDPTNYLT---IFKRAT 75 Query: 165 --CRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITF--LNQKKKNAKE 220 +G + A K L + P + + A +W A T L K ++ E Sbjct: 76 TYLSLGRTSQATDDFNKVLSLKPGFEGAHLQLARLRAKAGDWEVAKTQYGLAGKPPSSAE 135 Query: 221 WNRNRAILLIARSLENADKGDM----IASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 L A+ E A KG+ ++ AI + A Sbjct: 136 VVELEEAKLAAKLAEMAGKGEKWDECVSHAGTAITVASRSPHLRE---LRAHCRFELGDV 192 >gi|329961716|ref|ZP_08299747.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] gi|328531457|gb|EGF58297.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057] Length = 481 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 51/147 (34%), Gaps = 13/147 (8%) Query: 205 SRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASI 264 A L K K E L+ + + D G + + ++ K + S+ Sbjct: 51 EEAGELLKGKNKKNVE-------LVTSIARVYLDAGKLTEAEAYLEKARKADHKAPEVSV 103 Query: 265 CAAKSLISQNKKRKAEVILEKIWKVNPHPEIANIYTHL----LSENTVGKLKRALRLEEI 320 +++ KA + E+ + P+ Y S + +++ +L+ I Sbjct: 104 LEGDIALARKDVGKACQLYEQAIYFD--PDCKEAYLKYAQAYKSASPAQAIEKLQQLKAI 161 Query: 321 NKESVESLVIVSKIALEMGSIDQAHAK 347 + +E+ +++++ +A Sbjct: 162 APDYLEADKVLAEVYYANNHFGKAAEA 188 >gi|303328280|ref|ZP_07358718.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] gi|302861610|gb|EFL84546.1| TPR domain protein [Desulfovibrio sp. 3_1_syn3] Length = 208 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 8/124 (6%) Query: 165 CRIGDLNSAQRYATKALDISPD--APWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWN 222 GDL Y +A + PW A V + +AI L + K ++ Sbjct: 71 LERGDLEGCLHYNEEAANCRAKFPIPWSNIAFVHLQRGEPD--KAIAALRKALKWDPKFI 128 Query: 223 RNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVI 282 + + L A + KGD AS E L A A +L + +A Sbjct: 129 QAKNALATAYYM----KGDFKASVEACRELLAQEPGFAPAWNNLALALFDLKEYDQAVEA 184 Query: 283 LEKI 286 +K Sbjct: 185 ADKA 188 >gi|218779462|ref|YP_002430780.1| hypothetical protein Dalk_1614 [Desulfatibacillum alkenivorans AK-01] gi|218760846|gb|ACL03312.1| hypothetical protein Dalk_1614 [Desulfatibacillum alkenivorans AK-01] Length = 609 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 7/129 (5%) Query: 159 SLYFESCR-IGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKN 217 +YF + G + ++ +A + P P V ++ Q + K+W A+ + + + Sbjct: 439 GMYFLAESLAGRPDKVKQALDQAQRLDPHNPLVLNSIADQAMARKDWETALAAIERAIQA 498 Query: 218 AKE-WNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKK 276 E + + L A L G + A+ ++ + ++ + Sbjct: 499 GYECYVFRKKAALCAYRL-----GRSEEAESHALAAMGVKADARDILALMFLIAWDLGRD 553 Query: 277 RKAEVILEK 285 KA+ LE Sbjct: 554 EKADSYLEA 562 >gi|148258242|ref|YP_001242827.1| hypothetical protein BBta_7038 [Bradyrhizobium sp. BTAi1] gi|146410415|gb|ABQ38921.1| hypothetical protein BBta_7038 [Bradyrhizobium sp. BTAi1] Length = 309 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 5/121 (4%) Query: 240 GDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKVNP-HPEIANI 298 + E + +A++ ++L + ++ +A +LE+ NP + + Sbjct: 84 ATPQRAAEVYGERYRANPKDAVAAVAYGQALRNNGQREQAVAVLEQATLANPGNKTVLAA 143 Query: 299 YTHLLSENTVGKLKRALRLEEIN-KESVESLVIVSK-IALE-MGSIDQAHAKAMLAMKIA 355 Y L++N KL L + ++ + ++ + AL+ MG D+A A+KI Sbjct: 144 YGRALADNGNFKLA-FDVLSRAHSPDNPDWRLLSVQGTALDQMGRHDEARRYYESALKIV 202 Query: 356 P 356 P Sbjct: 203 P 203 >gi|159899989|ref|YP_001546236.1| TPR repeat-containing serine/threonin protein kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159893028|gb|ABX06108.1| serine/threonine protein kinase with TPR repeats [Herpetosiphon aurantiacus ATCC 23779] Length = 916 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 28/216 (12%) Query: 164 SCRIGDLNSAQRYATKA-------LDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKK 216 + +G+ +A + KA L + P+ + +++ A F + Sbjct: 659 ALHLGEDETAAQRFEKAYQSFDDALALDPNYGLAFAGKGWTQIYERKYEEAQQFFDLAL- 717 Query: 217 NAKEWNRNRAILLIARSLEN---------ADKGDMIASYHDAIESLKLCDNSIMASI-CA 266 E N+ L R+L N + D A+ D ++ + + + Sbjct: 718 ---ERNQRDPNALNGRALTNWWLGRNNSSDPQSDYAAAIRDYEAAIAEAPSWLSVYVDLG 774 Query: 267 AKSLISQNKKRKAEVILEKIWKVNP-HPE----IANIYTHLLSENTVGKLKRALRLEEIN 321 L KA +K + +P +P +A+ Y + LK + + Sbjct: 775 YVYLYDTKDTDKAIETFKKALERDPEYPNAIAGLADTYYDTRYYDEA--LKLYEQTINLQ 832 Query: 322 KESVESLVIVSKIALEMGSIDQAHAKAMLAMKIAPR 357 + + + + I D A + A+ P Sbjct: 833 PDYATAYLGKANILYNNKDYDAAIDQYSTALDYNPS 868 Score = 39.1 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 13/155 (8%) Query: 135 QYNIAHEKLEMMLQIPATRE-----FAVYSLYFESCRIGDLNSAQRYATKALDISPDAPW 189 Y A E + + LY D + A KAL+ P+ P Sbjct: 748 DYAAAIRDYEAAIAEAPSWLSVYVDLGYVYLY----DTKDTDKAIETFKKALERDPEYPN 803 Query: 190 VTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDA 249 + Y + + A+ Q ++ A + ++ + D A+ Sbjct: 804 AIAGLADTYYDTRYYDEALKLYEQTINLQPDY----ATAYLGKANILYNNKDYDAAIDQY 859 Query: 250 IESLKLCDNSIMASICAAKSLISQNKKRKAEVILE 284 +L + A I A ++ +A +L+ Sbjct: 860 STALDYNPSLKNAYIGKAYCYQAKGDIDEARQVLQ 894 >gi|121594976|ref|YP_986872.1| ParB family protein [Acidovorax sp. JS42] gi|120607056|gb|ABM42796.1| ParB family protein [Acidovorax sp. JS42] Length = 690 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 14/183 (7%) Query: 162 FESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEW 221 + D A++ + + + +A+ ++ + AI +++ + Sbjct: 343 CQGESSEDEAKAEKLEQRRDQVVEELQDAEDALQGYAPEVRDVAGAIVTIDRNGEAVIHR 402 Query: 222 NRNR-AILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAE 280 R A R+LE +G A A + + D++ A+ + + + R A Sbjct: 403 GLLREAEAKALRTLEKLRRGFGSAEGEAANDEHEDADDAPKAASLSDRLAQRLSAHRTAA 462 Query: 281 VILEKIWKVNPHPEIAN-----IYTHLLSENTVG------KLKRALRLEEINKESVESLV 329 + +E +PH +A T L + +L RLE + + ES Sbjct: 463 LQIEVA--RHPHVALAALVHGMAQTVLQPDAYGDGLPLGVRLTAQDRLEGMAPDWPESPA 520 Query: 330 IVS 332 V+ Sbjct: 521 AVA 523 >gi|311272495|ref|XP_003133469.1| PREDICTED: LOW QUALITY PROTEIN: protein TANC1-like [Sus scrofa] Length = 1860 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Query: 131 LAERQYNIAHEKL------EMMLQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDIS 184 A ++Y A K E M R +L + D A+ +A+KAL++ Sbjct: 1310 EAAQRYQYALRKFPREGFGEDMRPFNELRVSLYLNLSRCRRKTNDFGMAEEFASKALELK 1369 Query: 185 PDAPWVTEAVVQQYVLAKEWSRAITFLNQKKKNAKEWNRNRAILL 229 P + A + ++++ A+ L + K R +L Sbjct: 1370 PKSYEAFYARARAKRSSRQFVAALADLREAVKLCPTNQEIRRLLA 1414 >gi|291570823|dbj|BAI93095.1| serine/threonine protein kinase containing TPR domain [Arthrospira platensis NIES-39] Length = 759 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 72/258 (27%), Gaps = 37/258 (14%) Query: 43 VILSILYFFLFAWILLFAVSRFFLSCPAMLFHMLHKRNYDKGYKALYTGLMSIAAHNIPL 102 L+ L FL + L+ R +G + L Sbjct: 328 AALAGLLVFLGLFELVVPTFRPAY-------------YVRRGNQLLNDA-------RAED 367 Query: 103 ARKMHSYVSQQHTFHNEYLVYLLEVQIALAERQYNIAHEKLEMMLQIPAT--REFAVYSL 160 AR M ++ H + +++ A + L++ Sbjct: 368 ARNMFVRATEIQPNHAAGWAG--QANALAELGRHDRALVDYQKALELDPNNPDLLTSKGT 425 Query: 161 YFESCRIGDLNSAQRYATKALDISPDAPWVTE----AVVQQYVLAKEWSRAITFLNQKKK 216 ++G+ A +A+ I P+ A++ + A+ +Q K Sbjct: 426 LL--YQMGEPQKALDTHEQAIAIDPNYARAWHGKGIALIGLQ----RYDEAVEAFDQAKT 479 Query: 217 ---NAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQ 273 +A +++AI L + + + L+ + L Sbjct: 480 LRPSAPSVWQSKAIALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL 539 Query: 274 NKKRKAEVILEKIWKVNP 291 + +A EK ++NP Sbjct: 540 GRHEQALESYEKALEINP 557 Score = 38.8 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 46/177 (25%), Gaps = 36/177 (20%) Query: 92 LMSIAAHNIPLARKMHSYVSQQH-----TFHNEYLVYLLEVQIALAERQYNIAHEKLEMM 146 +++ + A + + + Q AE ++A K Sbjct: 604 ILAGGRGDFEGAIAAYDRAIELRPSFVPALRDRGFALSQWSQALQAEGNTSMASSK---- 659 Query: 147 LQIPATREFAVYSLYFESCRIGDLNSAQRYATKALDISPDAPWVTEAVVQQYVLAKEWSR 206 N+A +AL+I+P+ + Sbjct: 660 -----------------------ANAALESFDQALNINPNDHQSYVGRAIALSHQGRYDE 696 Query: 207 AITFLNQKKKNAKEWNRNRAILLIARSLENADKGDMIASYHDAIESLKLCDNSIMAS 263 A+ ++ + E ++ + R L G + ++LK+ A Sbjct: 697 ALNAFDRAQ----EIQPQDPLIWVNRGLVLERMGRNNEAIDAYDQALKIQPGFPPAV 749 Score = 38.0 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 78/247 (31%), Gaps = 44/247 (17%) Query: 126 EVQIALAERQYNIAHEKLEM--------MLQIPATREFAV-YSLYFESCRIGDLNSAQRY 176 + + + A + + + P E V G A Sbjct: 491 KAIALEYQGKMAEAAQVYSEALATYDDILREQPRRAEIWVERGSVLSKL--GRHEQALES 548 Query: 177 ATKALDISPDAPWVTEAVVQ----QYVLAKEWSRAITFLNQKKKNAKEWN---RNRAILL 229 KAL+I+PD +A++Q + A+T ++ + E + NR +L Sbjct: 549 YEKALEINPDH---FQALLQKGNVLFSPLGRTEEAVTISDRAIEVQPESHLAWHNRGSIL 605 Query: 230 IARSLENADKGDMIASYHDAIESLKLCDNSIMASICAAKSLISQNKKRKAEVILEKIWKV 289 + D IA+Y AIE L + + A + + ++ +A Sbjct: 606 ---AGGRGDFEGAIAAYDRAIE---LRPSFVPA--LRDRG-FALSQWSQALQ-------- 648 Query: 290 NPHPEIANIYTHLLSENTVGKLKRALRLEEINKESVESLVIVSKIALEMGSIDQAHAKAM 349 A T + S L+ + IN +S V + G D+A Sbjct: 649 ------AEGNTSMASSKANAALESFDQALNINPNDHQSYVGRAIALSHQGRYDEALNAFD 702 Query: 350 LAMKIAP 356 A +I P Sbjct: 703 RAQEIQP 709 >gi|283852281|ref|ZP_06369553.1| Tetratricopeptide TPR_4 [Desulfovibrio sp. FW1012B] gi|283572363|gb|EFC20351.1| Tetratricopeptide TPR_4 [Desulfovibrio sp. FW1012B] Length = 1616 Score = 39.5 bits (91), Expect = 1.4, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 56/235 (23%), Gaps = 12/235 (5%) Query: 134 RQYNIAHEKLEMMLQIPATREFAVYSLYFESCRIG--