RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254781036|ref|YP_003065449.1| hypothetical protein
CLIBASIA_04690 [Candidatus Liberibacter asiaticus str. psy62]
         (65 letters)



>gnl|CDD|146308 pfam03602, Cons_hypoth95, Conserved hypothetical protein 95. 
          Length = 181

 Score = 24.1 bits (53), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 7  GSLGVAVLSRYVKSGVF 23
          G+LG+  LSR   S VF
Sbjct: 55 GALGLEALSRGASSVVF 71


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.325    0.139    0.442 

Gapped
Lambda     K      H
   0.267   0.0700    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 819,045
Number of extensions: 32150
Number of successful extensions: 97
Number of sequences better than 10.0: 1
Number of HSP's gapped: 97
Number of HSP's successfully gapped: 3
Length of query: 65
Length of database: 6,263,737
Length adjustment: 37
Effective length of query: 28
Effective length of database: 5,464,204
Effective search space: 152997712
Effective search space used: 152997712
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.1 bits)