HHsearch alignment for GI: 254781037 and conserved domain: PRK09861

>PRK09861 cytoplasmic membrane lipoprotein-28; Provisional.
Probab=96.66  E-value=0.064  Score=32.78  Aligned_cols=195  Identities=11%  Similarity=0.119  Sum_probs=104.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE-
Q ss_conf             8828997079888899999999999974089983389999973274115875567486226999999998709836997-
Q gi|254781037|r    3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV-   81 (307)
Q Consensus         3 ~~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAV-   81 (307)
T Consensus        31 ~k~ikVG~~~~p~~~i~-e~~~~~~~ek---~G~~leiv~Fs---Dy~~----------------PN~AL~~G~iDaN~f   87 (272)
T PRK09861         31 AKHIKVGVINGAEQDVA-EVAKKVAKEK---YGLDVELVGFS---GSLL----------------PNDATNHGELDANVF   87 (272)
T ss_pred             CCEEEEEECCCCHHHHH-HHHHHHHHHH---CCCEEEEEEEC---CCCC----------------HHHHHHCCCCCCHHH
T ss_conf             97389996789869999-9999888761---79768999946---8622----------------628976798360245


Q ss_pred             -EC--CCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCC----CHHHHHHHH------HC-----
Q ss_conf             -40--3432111012210122236568310566524324332456732204753----028889984------23-----
Q gi|254781037|r   82 -HS--AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL----RRKALLLRW------RS-----  143 (307)
Q Consensus        82 -HS--lKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS~----RR~aql~~~------~p-----  143 (307)
T Consensus        88 QH~pyL~~~n--~~~g~~L~~v~~~~~~P~glYS~K~ksl~dlp~Ga~IaIPnDpsN~~RAL~lL~~aGLI~Lk~~~~~~  165 (272)
T PRK09861         88 QHRPFLEQDN--QAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLL  165 (272)
T ss_pred             HHHHHHHHHH--HHCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf             5799999999--98699579973167830140344659875847999898047812699999999988978977999977


Q ss_pred             -----------CCCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEC---
Q ss_conf             -----------773103307679999986378765563014545421621122233686673585432078999852---
Q gi|254781037|r  144 -----------DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---  209 (307)
Q Consensus       144 -----------~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~---  209 (307)
T Consensus       166 ~t~~DI~~NPk~lk~~e~~aaql--~rsl~Dp~vD~avin~n~a~~agl~p~~dal~~E~~--~--~py~niiavr~~~~  239 (272)
T PRK09861        166 PTALDITDNPRHLQIMELEGAQL--PRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDK--N--SPYVNILVAREDNK  239 (272)
T ss_pred             CCHHHHHCCCCCCEEEECCHHHH--HHHHCCCCCCEEEECHHHHHHCCCCCCCCCEEECCC--C--CCEEEEEEECCCCC
T ss_conf             77445760887767998267774--675057761689976057988777944002036689--9--98379999827676


Q ss_pred             CCCHHHHHHHHHCCHHHHH
Q ss_conf             7612455677623978888
Q gi|254781037|r  210 NNPKAQELVKVINHEDTWD  228 (307)
Q Consensus       210 ~d~~i~~il~~Ind~~T~~  228 (307)
T Consensus       240 d~~~ik~lv~a~~S~evk~  258 (272)
T PRK09861        240 NAENVKEFLQSYQSPEVAK  258 (272)
T ss_pred             CCHHHHHHHHHHCCHHHHH
T ss_conf             9989999999977999999