HHsearch alignment for GI: 254781037 and conserved domain: PRK09861
>PRK09861 cytoplasmic membrane lipoprotein-28; Provisional.
Probab=96.66 E-value=0.064 Score=32.78 Aligned_cols=195 Identities=11% Similarity=0.119 Sum_probs=104.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE-
Q ss_conf 8828997079888899999999999974089983389999973274115875567486226999999998709836997-
Q gi|254781037|r 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV- 81 (307)
Q Consensus 3 ~~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAV- 81 (307)
T Consensus 31 ~k~ikVG~~~~p~~~i~-e~~~~~~~ek---~G~~leiv~Fs---Dy~~----------------PN~AL~~G~iDaN~f 87 (272)
T PRK09861 31 AKHIKVGVINGAEQDVA-EVAKKVAKEK---YGLDVELVGFS---GSLL----------------PNDATNHGELDANVF 87 (272)
T ss_pred CCEEEEEECCCCHHHHH-HHHHHHHHHH---CCCEEEEEEEC---CCCC----------------HHHHHHCCCCCCHHH
T ss_conf 97389996789869999-9999888761---79768999946---8622----------------628976798360245
Q ss_pred -EC--CCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCC----CHHHHHHHH------HC-----
Q ss_conf -40--3432111012210122236568310566524324332456732204753----028889984------23-----
Q gi|254781037|r 82 -HS--AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSL----RRKALLLRW------RS----- 143 (307)
Q Consensus 82 -HS--lKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS~----RR~aql~~~------~p----- 143 (307)
T Consensus 88 QH~pyL~~~n--~~~g~~L~~v~~~~~~P~glYS~K~ksl~dlp~Ga~IaIPnDpsN~~RAL~lL~~aGLI~Lk~~~~~~ 165 (272)
T PRK09861 88 QHRPFLEQDN--QAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLL 165 (272)
T ss_pred HHHHHHHHHH--HHCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf 5799999999--98699579973167830140344659875847999898047812699999999988978977999977
Q ss_pred -----------CCCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEC---
Q ss_conf -----------773103307679999986378765563014545421621122233686673585432078999852---
Q gi|254781037|r 144 -----------DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV--- 209 (307)
Q Consensus 144 -----------~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~--- 209 (307)
T Consensus 166 ~t~~DI~~NPk~lk~~e~~aaql--~rsl~Dp~vD~avin~n~a~~agl~p~~dal~~E~~--~--~py~niiavr~~~~ 239 (272)
T PRK09861 166 PTALDITDNPRHLQIMELEGAQL--PRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDK--N--SPYVNILVAREDNK 239 (272)
T ss_pred CCHHHHHCCCCCCEEEECCHHHH--HHHHCCCCCCEEEECHHHHHHCCCCCCCCCEEECCC--C--CCEEEEEEECCCCC
T ss_conf 77445760887767998267774--675057761689976057988777944002036689--9--98379999827676
Q ss_pred CCCHHHHHHHHHCCHHHHH
Q ss_conf 7612455677623978888
Q gi|254781037|r 210 NNPKAQELVKVINHEDTWD 228 (307)
Q Consensus 210 ~d~~i~~il~~Ind~~T~~ 228 (307)
T Consensus 240 d~~~ik~lv~a~~S~evk~ 258 (272)
T PRK09861 240 NAENVKEFLQSYQSPEVAK 258 (272)
T ss_pred CCHHHHHHHHHHCCHHHHH
T ss_conf 9989999999977999999