HHsearch alignment for GI: 254781037 and conserved domain: PRK10797
>PRK10797 glutamate and aspartate transporter subunit; Provisional.
Probab=96.33 E-value=0.1 Score=31.47 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=96.8
Q ss_pred CCCEEEEECCCHH--------------HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHH
Q ss_conf 8828997079888--------------89999999999997408998338999997327411587556748622699999
Q gi|254781037|r 3 KKPFRIGTRCSPL--------------ALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEI 68 (307)
Q Consensus 3 ~~~i~IgtR~S~L--------------Al~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkel 68 (307)
T Consensus 39 ~G~l~vG~~~~~pPf~~~d~~g~~vGfdvDla~~ia~~l~~~l~~~~~~v~~v~~~~--------------------~~r 98 (302)
T PRK10797 39 NGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITS--------------------QNR 98 (302)
T ss_pred CCEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCH--------------------HHH
T ss_conf 998999989998997168999985154179999999999877446773499997578--------------------887
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCC--CCCCCCCCCCEE----ECCCCCHHHHHH---
Q ss_conf 99987098369974034321110122101222365683105665243--243324567322----047530288899---
Q gi|254781037|r 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA--QSLKDLALHSVI----GTSSLRRKALLL--- 139 (307)
Q Consensus 69 e~aLl~g~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~--~~l~~lp~~a~I----GTsS~RR~aql~--- 139 (307)
T Consensus 99 ip~L~~gk~Di~~~~~t~T~e-R~k~vdFS-~pY~~~~~~llv~k~s~Iks~~DL~-GK~V~V~~GTt~e---~~~~~~~ 172 (302)
T PRK10797 99 IPLLQNGTFDFECGSTTNNLE-RQKQAAFS-DTIFVVGTRLLTKKGGDIKDFADLK-GKAVVVTSGTTSE---VLLNKLN 172 (302)
T ss_pred HHHHHCCCCCEEEECCCCCHH-HHCCEEEC-CCCEECCEEEEEECCCCCCCHHHHC-CCEEEEECCCHHH---HHHHHHH
T ss_conf 799978980889735756977-74124214-6627714689997788666756608-9979996787399---9999866
Q ss_pred -HHHCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEHH---H-HHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHH
Q ss_conf -84237731033076799999863787655630145---4-542162112223368667358543207899985276124
Q gi|254781037|r 140 -RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYA---G-IKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKA 214 (307)
Q Consensus 140 -~~~p~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~A---g-l~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i 214 (307)
T Consensus 173 ~~~~~~~~iv~~~~~-~~a~~~L~~GrvDA~~~D~~~l~~~~~~~~~~~-~~~iv~-----~~~~~e~ygia~rKgd~~L 245 (302)
T PRK10797 173 EEQKMNMRIISAKDH-GDSFRTLESGRAVAFMMDDALLAGERAKAKKPD-NWEIVG-----KPQSQEAYGCMLRKDDPQF 245 (302)
T ss_pred HHHCCCCEEEECCCH-HHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCC-CEEEEC-----CCCCCCCEEEEEECCCHHH
T ss_conf 750677237850888-999999985995099812298889998636997-549937-----8677760799996899999
Q ss_pred HHHHH
Q ss_conf 55677
Q gi|254781037|r 215 QELVK 219 (307)
Q Consensus 215 ~~il~ 219 (307)
T Consensus 246 ~~~Vn 250 (302)
T PRK10797 246 KKLMD 250 (302)
T ss_pred HHHHH
T ss_conf 99999