HHsearch alignment for GI: 254781037 and conserved domain: PRK11063
>PRK11063 metQ DL-methionine transporter substrate-binding subunit; Provisional.
Probab=94.03 E-value=0.26 Score=28.80 Aligned_cols=199 Identities=14% Similarity=0.156 Sum_probs=104.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEE-
Q ss_conf 8828997079888899999999999974089983389999973274115875567486226999999998709836997-
Q gi|254781037|r 3 KKPFRIGTRCSPLALAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISGEIDCAV- 81 (307)
Q Consensus 3 ~~~i~IgtR~S~LAl~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g~iDiAV- 81 (307)
T Consensus 30 ~~~ikVG~~~gp~~ei~-e~~~~~~~ek---~G~~veiv~Fs---Dy~----------------~pN~AL~~G~iDaN~f 86 (271)
T PRK11063 30 PNHIKVGVIVGAEQQVA-EVAQKVAKEK---YGLDVELVTFN---DYV----------------LPNEALSKGDIDANAF 86 (271)
T ss_pred CCEEEEEECCCCHHHHH-HHHHHHHHHH---CCCEEEEEEEC---CCH----------------HHHHHHHCCCCCHHHH
T ss_conf 98189984689879999-9988888860---79768999936---832----------------1558986798442345
Q ss_pred -EC--CCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCC----CCHHHHHHHH------HCCC---
Q ss_conf -40--343211101221012223656831056652432433245673220475----3028889984------2377---
Q gi|254781037|r 82 -HS--AKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSS----LRRKALLLRW------RSDI--- 145 (307)
Q Consensus 82 -HS--lKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS----~RR~aql~~~------~p~l--- 145 (307)
T Consensus 87 QH~~yL~~~n--k~~g~~L~~v~~~~~~P~glYS~K~ksl~elp~Ga~IaIPND~sN~~RAL~lL~~aGLIkLk~~~~~~ 164 (271)
T PRK11063 87 QHKPYLDQQI--KDRGYKLVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLL 164 (271)
T ss_pred HCHHHHHHHH--HHCCCCEEEEEEEEEEEEEEEECCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf 5799999999--97799579986677841586423658864756999998048856099999999988988977999987
Q ss_pred -CCHHHCCCH----------HHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEC---CC
Q ss_conf -310330767----------9999986378765563014545421621122233686673585432078999852---76
Q gi|254781037|r 146 -SVIDFRGKI----------ETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHV---NN 211 (307)
Q Consensus 146 -~~~~iRGNv----------~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~---~d 211 (307)
T Consensus 165 ~T~~DI~~Npk~l~~~e~daaql~rsl~D~dv~~aviN~~~a~~agl~p~kdal~~E~--~~~p--y~Nvivvr~~~kd~ 240 (271)
T PRK11063 165 PTVLDIVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVED--KDSP--YVNLIVAREDNKDA 240 (271)
T ss_pred CCHHHHHCCCCCCEEEECCHHHHHHHCCCCCEEEEEECHHHHHHCCCCCCCCCEEECC--CCCC--EEEEEEECCCCCCC
T ss_conf 8966885488774899903776443135765108981477897779893425047778--9998--38999982777799
Q ss_pred CHHHHHHHHHCCHHHHHHH
Q ss_conf 1245567762397888887
Q gi|254781037|r 212 PKAQELVKVINHEDTWDSV 230 (307)
Q Consensus 212 ~~i~~il~~Ind~~T~~~v 230 (307)
T Consensus 241 ~~ik~lv~~~~S~evk~~I 259 (271)
T PRK11063 241 ENVKKFVQAYQSDEVYEAA 259 (271)
T ss_pred HHHHHHHHHHCCHHHHHHH
T ss_conf 8999999997799999999