HHsearch alignment for GI: 254781037 and conserved domain: PRK11260
>PRK11260 cystine transporter subunit; Provisional.
Probab=95.85 E-value=0.11 Score=31.21 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=76.6
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECC----CCCCCCCCCCCEEECCCCCH-HHHHHH
Q ss_conf 9999998709836997403432111012210122236568310566524----32433245673220475302-888998
Q gi|254781037|r 66 EEIEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT----AQSLKDLALHSVIGTSSLRR-KALLLR 140 (307)
Q Consensus 66 kele~aLl~g~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~----~~~l~~lp~~a~IGTsS~RR-~aql~~ 140 (307)
T Consensus 88 ~~~i~~L~~g~~Di~~~~~t~T~e-R~~~~~Fs-~PY~~~~~~~~v~~~~~~~i~~~~dL~-Gk~V~v~~gs~~~~~l~~ 164 (264)
T PRK11260 88 DGMLASLDSKRIDVVINQVTISDE-RKKKYDFS-TPYTVSGIQALVKKGNEGTIKTAADLK-GKKVGVGLGTNYEEWLRQ 164 (264)
T ss_pred HHHHHHHHCCCCCEEECCCCCCHH-HHHHCCCC-CCEEEEEEEEEEECCCCCCCCCHHHHC-CCEEEEECCCHHHHHHHH
T ss_conf 999999866994667257535888-88517767-743774459999878976668978966-871688569789999986
Q ss_pred HHCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHH
Q ss_conf 423773103307679999986378765563014545421621122233686673585432078999852761245567
Q gi|254781037|r 141 WRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 (307)
Q Consensus 141 ~~p~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il 218 (307)
T Consensus 165 ~~~~~~i~~~~-~~~~~~~~l~~G~vDa~i~d~~~~~~~~~~~~~~~~~~----~~~~~~~~~~iav~k~~~~L~~~i 237 (264)
T PRK11260 165 NVQGVDVRTYD-DDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVT----GEAFSRQESGVALRKGNPDLLKAV 237 (264)
T ss_pred HCCCCCEEEEC-CHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEEEC----CCCCCCCEEEEEEECCCHHHHHHH
T ss_conf 08898168636-61899999875986799945999999998689978980----687666508999989999999999