HHsearch results for GI: 254781037 and protein with PDBid: 1wdn_A
>1wdn_A GLNBP, glutamine binding protein; closed form, complex, peptide, complex (binding protein/peptide); 1.94A {Escherichia coli} SCOP: c.94.1.1 PDB: 1ggg_A
Probab=94.81 E-value=0.22 Score=27.85 Aligned_cols=186 Identities=16% Similarity=0.077 Sum_probs=98.7
Q ss_pred CCCEEEEECCC--HHH--------HHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHH
Q ss_conf 88289970798--888--------99999999999974089983389999973274115875567486226999999998
Q gi|254781037|r 3 KKPFRIGTRCS--PLA--------LAHAFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL 72 (307)
Q Consensus 3 ~~~i~IgtR~S--~LA--------l~Qa~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aL 72 (307)
.|+|+|||..+ |.. =...+.+....+.. +++++++... - .++-.+|
T Consensus 2 ~k~l~v~~~~~~pP~~~~~~g~~~G~~~dl~~~ia~~~----g~~~~~~~~~--~------------------~~~~~~l 57 (226)
T 1wdn_A 2 DKKLVVATDTAFVPFEFKQGDLYVGFDVDLWAAIAKEL----KLDYELKPMD--F------------------SGIIPAL 57 (226)
T ss_dssp --CEEEEEESSBTTTBEEETTEEESHHHHHHHHHHHHH----TCCEEEEEEC--G------------------GGHHHHH
T ss_pred CCEEEEEECCCCCCEEEEECCEEEEHHHHHHHHHHHHH----CCCEEEEECC--H------------------HHHHHHH
T ss_conf 95099998999788488119958887999999999996----9966999789--9------------------9999998
Q ss_pred HCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECC---CCCCCCCCCCCEEECCCCCH-HHHHHHHHCCCCCH
Q ss_conf 709836997403432111012210122236568310566524---32433245673220475302-88899842377310
Q gi|254781037|r 73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHT---AQSLKDLALHSVIGTSSLRR-KALLLRWRSDISVI 148 (307)
Q Consensus 73 l~g~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~---~~~l~~lp~~a~IGTsS~RR-~aql~~~~p~l~~~ 148 (307)
.+|++|+++.++-.-|. ....+.... +-=.++.-+++.++ ..++++| .|.+||+..--= ...++...+..++.
T Consensus 58 ~~g~~D~~~~~~~~t~~-r~~~~~fs~-p~~~~~~~~~~~~~~~~~~~~~dl-~g~~v~~~~g~~~~~~l~~~~~~~~~~ 134 (226)
T 1wdn_A 58 QTKNVDLALAGITITDE-RKKAIDFSD-GYYKSGLLVMVKANNNDVKSVKDL-DGKVVAVKSGTGSVDYAKANIKTKDLR 134 (226)
T ss_dssp HTTSSSEEEEEEECCHH-HHTTSEECS-CCEEEEEEEEEETTCCSCSSSTTT-TTCEEEEETTSHHHHHHHHHCCCSEEE
T ss_pred HCCCCCEEEEECCCCHH-HCCEEEECC-CEEEEEEEEEEECCCCCCCCHHHH-CCCEEEEECCCCCCCHHHHHCCCCCEE
T ss_conf 76998657442123541-325488245-569977799999999999997995-899999987866420123430355236
Q ss_pred HHCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHH
Q ss_conf 33076799999863787655630145454216211222336866735854320789998527612455677
Q gi|254781037|r 149 DFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 (307)
Q Consensus 149 ~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il~ 219 (307)
.+ .+.++-+..+.+|++|+++.......-+--...... .....+......+++-.+++|+.+.+.+.
T Consensus 135 ~~-~~~~~~~~~l~~g~vD~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~l~~~~n 201 (226)
T 1wdn_A 135 QF-PNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQ---FKAVGDSLEAQQYGIAFPKGSDELRDKVN 201 (226)
T ss_dssp EE-SSHHHHHHHHHTTSCSEEEEEHHHHHHHHHTTTTTT---EEEEEEEEEEEEEEEEECTTCHHHHHHHH
T ss_pred EE-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCC---EEEECCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf 50-778999988745846899916188888876415674---05515567776189999799999999999