HHsearch results for GI: 254781037 and protein with PDBid: 1xt8_A
>1xt8_A Putative amino-acid transporter periplasmic solute-binding protein; ABC transport, cysteine uptake, spine, structural genomics; 2.00A {Campylobacter jejuni} SCOP: c.94.1.1
Probab=93.05 E-value=0.42 Score=26.09 Aligned_cols=142 Identities=11% Similarity=0.082 Sum_probs=75.4
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCC---CCCCCCCCCCEEECCCCCHH-HHHHHHHC
Q ss_conf 999987098369974034321110122101222365683105665243---24332456732204753028-88998423
Q gi|254781037|r 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRK-ALLLRWRS 143 (307)
Q Consensus 68 le~aLl~g~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~---~~l~~lp~~a~IGTsS~RR~-aql~~~~p 143 (307)
...+|.+|++|+++.++-.-|. ......+.- +--.+ .-+++.+.. ++++||. |.+||...---. ..+....|
T Consensus 98 ~~~~l~~g~~d~~~~~~~~t~~-R~~~~~fs~-py~~~-~~~~~~~~~~~i~~~~dL~-g~~V~v~~g~~~~~~l~~~~~ 173 (292)
T 1xt8_A 98 RVEFLKSNKVDIILANFTQTPQ-RAEQVDFCS-PYMKV-ALGVAVPKDSNITSVEDLK-DKTLLLNKGTTADAYFTQNYP 173 (292)
T ss_dssp HHHHHHTTSCSEECSSCBCCHH-HHTTEEECC-CCEEE-EEEEEEETTCCCCSSGGGT-TSEEEEETTSHHHHHHHHHCT
T ss_pred HHHHHHCCCCCCCCCCCCCCCC-HHCCCCCCC-CEEEC-CCEEEEECCCCCCCHHHHH-HCEEEEECCCHHHHHHHHHHH
T ss_conf 8999986997711355656711-210246675-34741-5137872245767477770-066775158589999997100
Q ss_pred CCCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHH
Q ss_conf 773103307679999986378765563014545421621122233686673585432078999852761245567
Q gi|254781037|r 144 DISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELV 218 (307)
Q Consensus 144 ~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il 218 (307)
+.+++.+. +.+.-++.|.+|++|+++.....+..+-....... +... |..-+.-+++-.+++|+++.+.+
T Consensus 174 ~~~~v~~~-~~~~~~~~l~~G~vDa~~~d~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~iav~k~~~~L~~~l 243 (292)
T 1xt8_A 174 NIKTLKYD-QNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFK-MGIK---ELGNKDVIAPAVKKGDKELKEFI 243 (292)
T ss_dssp TSEEEEES-SHHHHHHHHHTTSSSEEEEEHHHHHHHHHHCTTEE-EEEE---EEEEEEEECCEEETTCHHHHHHH
T ss_pred HHHHEEEC-CCCCHHHHHHCCCEEEEEECHHHHHHHHHHCCCCE-EECC---CCCCCCEEEEEEECCCHHHHHHH
T ss_conf 00000000-22201124436936999956999999999789978-9414---67877339999979999999999