HHsearch results for GI: 254781037 and protein with PDBid: 2a5s_A
>2a5s_A N-methyl-D-aspartate receptor nmdar2A subunit, NMDA receptor nmdar2A; protein-ligand complex, metal transport,membrane protein; HET: GLU; 1.70A {Rattus norvegicus} SCOP: c.94.1.1 PDB: 2a5t_B*
Probab=95.77 E-value=0.068 Score=31.19 Aligned_cols=171 Identities=15% Similarity=0.020 Sum_probs=79.0
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCC------C--CCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCC-HHHH
Q ss_conf 99999870983699740343211101------2--2101222365683105665243243324567322047530-2888
Q gi|254781037|r 67 EIEKKLISGEIDCAVHSAKDMPTKLL------K--GLQISAYLPREDIRDVFISHTAQSLKDLALHSVIGTSSLR-RKAL 137 (307)
Q Consensus 67 ele~aLl~g~iDiAVHSlKDlP~~~~------~--~l~i~a~~~R~d~rD~lv~~~~~~l~~lp~~a~IGTsS~R-R~aq 137 (307)
++-.+|.+|++|+++-++..-|.... | ...+.-+.++.++...+-..+.++..++..+..+|+..-- =...
T Consensus 96 ~li~~l~~g~~Di~i~~~tit~eR~~~vdFs~Py~~~~~~ilv~k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (284)
T 2a5s_A 96 GMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRGTQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN 175 (284)
T ss_dssp HHHHHHHTTSCSEECSSCBCCHHHHTTEEECCCCEEECEEEEEETTCCCCSTTSHHHHSGGGSSSCCCEECCTTSHHHHH
T ss_pred HHHHHHHCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCHHHCCCCEEEEEECCCHHHHH
T ss_conf 99976638858999958807999995482777624676778986798666635653267033156618999837549999
Q ss_pred HHHHHCCCCCH--H-HCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCC---CCCCCCHHHCCCCCCCCEEEEEEECCC
Q ss_conf 99842377310--3-30767999998637876556301454542162112---223368667358543207899985276
Q gi|254781037|r 138 LLRWRSDISVI--D-FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKV---IKEILNIEDFPPSPGQGAICIETHVNN 211 (307)
Q Consensus 138 l~~~~p~l~~~--~-iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~---i~~~l~~~~~~PA~gQGaIaIe~r~~d 211 (307)
++..+|+.... . ---+.+.-+..|.+|++||+|.-.+-+.-+-..+. +....++..+ +.-..|+-.++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~e~~~~l~~G~vDa~i~d~~~l~~~~~~~~~~~~~~v~~~~~~----~~~~~gia~~k~s 251 (284)
T 2a5s_A 176 IRNNYPYMHQYMTRFNQRGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIF----ATTGYGIALQKGS 251 (284)
T ss_dssp HHTTCHHHHHHHGGGCCSSHHHHHHHHHTTSCSEEEEEHHHHHHHHHTCTTSCEEEEECCCGG----GCEEECCEEETTC
T ss_pred HHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCEEEECCCCCC----CCEEEEEEECCCH
T ss_conf 997655431267982489999999999869987896459999999985899858993588765----7606999981883
Q ss_pred CHHHHHHHHHCCHHHH--HHHHHHHHHHHHHCCCCC
Q ss_conf 1245567762397888--887889999987177648
Q gi|254781037|r 212 PKAQELVKVINHEDTW--DSVNCERAFLAELDGSCK 245 (307)
Q Consensus 212 ~~i~~il~~Ind~~T~--~~v~aER~fL~~L~GgC~ 245 (307)
+. +..+|..-.. ..-..++-.-+-++|-||
T Consensus 252 ~l----~~~in~ai~~l~~~G~~~~l~~KW~~~~c~ 283 (284)
T 2a5s_A 252 PW----KRQIDLALLQFVGDGEMEELETLWLTGICH 283 (284)
T ss_dssp TT----HHHHHHHHHHHHHHTHHHHHHHHHTCCCCC
T ss_pred HH----HHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
T ss_conf 99----999999999999698999999735569789