HHsearch results for GI: 254781037 and protein with PDBid: 2v25_A
>2v25_A Major cell-binding factor; antigen, adhesin, aspartate, glutamate, transport, ABC transport, virulence factor, receptor; 1.49A {Campylobacter jejuni}
Probab=93.95 E-value=0.34 Score=26.65 Aligned_cols=140 Identities=17% Similarity=0.156 Sum_probs=72.0
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCC---CCCCCCCCCCEEECCC--CCHH---HHHH
Q ss_conf 999987098369974034321110122101222365683105665243---2433245673220475--3028---8899
Q gi|254781037|r 68 IEKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSS--LRRK---ALLL 139 (307)
Q Consensus 68 le~aLl~g~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~---~~l~~lp~~a~IGTsS--~RR~---aql~ 139 (307)
.-.++.+|++|++++++-.-|.. ...+.... +--.. .-+++.+++ ++++|| .|.+||... .--. .+..
T Consensus 93 ~~~~l~~g~~d~~~~~~~~t~~r-~~~~~fs~-p~~~~-~~~~~~~~~~~i~s~~dL-~g~~I~v~~gs~~~~~l~~~~~ 168 (259)
T 2v25_A 93 RGPLLDNGSVDAVIATFTITPER-KRIYNFSE-PYYQD-AIGLLVLKEKKYKSLADM-KGANIGVAQAATTKKAIGEAAK 168 (259)
T ss_dssp HHHHHHTTSCSEECSSCBCCHHH-HTTEEECS-CSEEE-EEEEEEEGGGCCCSGGGC-TTCEEEEETTCSHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCHHH-HHCEEECE-EEECC-CCCEEEECCCCCCCHHHH-CCCCCCEECCCCHHHHHHHHHH
T ss_conf 89999769966003336689788-10114220-34404-543022035797997892-6985002347707788999998
Q ss_pred HHHCCCCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHH
Q ss_conf 84237731033076799999863787655630145454216211222336866735854320789998527612455677
Q gi|254781037|r 140 RWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVK 219 (307)
Q Consensus 140 ~~~p~l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il~ 219 (307)
...++.++... .+.+.-+..|.+|++|+++.-..-+..+- ......++ +.-...-+++-.+++|+++.+.+.
T Consensus 169 ~~~~~~~~~~~-~s~~~~~~~l~~g~vDa~i~d~~~~~~~~--~~~~~i~~-----~~~~~~~~~~~~~k~~~~l~~~ln 240 (259)
T 2v25_A 169 KIGIDVKFSEF-PDYPSIKAALDAKRVDAFSVDKSILLGYV--DDKSEILP-----DSFEPQSYGIVTKKDDPAFAKYVD 240 (259)
T ss_dssp HTTCCCEEEEE-SSHHHHHHHHHTTSSSEEEEEHHHHTTTC--CTTEEECS-----CCCSEEEECCEEETTCHHHHHHHH
T ss_pred HCCCCEEEECC-CHHHHHHHHHHCCEEEEEECCHHHHHHHH--HHCCCCCC-----CCCCCEEEEEEEECCCHHHHHHHH
T ss_conf 70884444214-20788876542783789973599999999--73974357-----877732699999589999999999