HHsearch results for GI: 254781037 and protein with PDBid: 3del_B

>3del_B Arginine binding protein; alpha and beta protein (A/B), periplasmic protein, protein binding, transport protein; 1.92A {Chlamydia trachomatis}
Probab=94.64  E-value=0.25  Score=27.58  Aligned_cols=208  Identities=13%  Similarity=0.116  Sum_probs=103.8

Q ss_pred             CCCEEEEECCC--HHHHHH--------HHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHH
Q ss_conf             88289970798--888999--------99999999974089983389999973274115875567486226999999998
Q gi|254781037|r    3 KKPFRIGTRCS--PLALAH--------AFETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKL   72 (307)
Q Consensus         3 ~~~i~IgtR~S--~LAl~Q--------a~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aL   72 (307)
                      ..+|+||+-++  |+....        .-.+.+++.+.-   +++++++.+.          .          .++..+|
T Consensus        10 ~~~l~Vg~~~~~pP~~~~~~~G~~~G~~vDi~~~ia~~l---g~~v~~~~~~----------~----------~~~~~~l   66 (242)
T 3del_B           10 SEKFIVGTNATYPPFEFVDKRGEVVGFDIDLAREISNKL---GKTLDVREFS----------F----------DALILNL   66 (242)
T ss_dssp             -CEEEEEECSCBTTTBEECTTSCEESHHHHHHHHHHHHH---TCEEEEEECC----------G----------GGHHHHH
T ss_pred             CCEEEEEECCCCCCCEEECCCCCEEEEHHHHHHHHHHHH---CCCEEEEECC----------H----------HHHHHHH
T ss_conf             996999989988991589999988872999999999996---9976999789----------8----------9999999


Q ss_pred             HCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCC---CCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCHH
Q ss_conf             7098369974034321110122101222365683105665243---2433245673220475302888998423773103
Q gi|254781037|r   73 ISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTA---QSLKDLALHSVIGTSSLRRKALLLRWRSDISVID  149 (307)
Q Consensus        73 l~g~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~---~~l~~lp~~a~IGTsS~RR~aql~~~~p~l~~~~  149 (307)
                      .+|++|+++.++-.-|..... +... -+......-+++.++.   .++++| .+.+||...-=-..++...+|+.+++.
T Consensus        67 ~~g~~d~~~~~~~~~~~r~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~Vgv~~gs~~~~~l~~~~~~~i~~  143 (242)
T 3del_B           67 KQHRIDAVITGMSITPSRLKE-ILMI-PYYGEEIKHLVLVFKGENKHPLPLT-QYRSVAVQTGTYQEAYLQSLSEVHIRS  143 (242)
T ss_dssp             HTTSSSEECSSBBCCHHHHTT-EEEE-EEEEEEESEEEEEEESCCSCCCCGG-GSSCEEEETTSHHHHHHHHSTTCCEEE
T ss_pred             HCCCCCCCCCCCCCCHHHHHH-CCCC-CCCCCCCCEEEEEECCCCCCHHHHH-CCCCEEEECCCHHHHHHHHCCCCEEEE
T ss_conf             759866100357699889831-3678-6432355326886315433213442-022002425743589998565870798


Q ss_pred             HCCCHHHHHHHHHCCCCCEEEEEHHHHHHCCCC----CCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHCCHH
Q ss_conf             307679999986378765563014545421621----1222336866735854320789998527612455677623978
Q gi|254781037|r  150 FRGKIETRLNKLNNNKAHAILLAYAGIKRLKKE----KVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHED  225 (307)
Q Consensus       150 iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL~l~----~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il~~Ind~~  225 (307)
                      + .+...-+..|.+|++|++|....-+..+--.    ......++..     .-.-..++-.+++|+.+.+   .||..-
T Consensus       144 ~-~~~~~~~~~L~~griD~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~va~~k~~~~l~~---~ln~al  214 (242)
T 3del_B          144 F-DSTLEVLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPED-----QWVLGYGIGVASDRPALAL---KIEAAV  214 (242)
T ss_dssp             E-SSHHHHHHHHHTTSSSEEEECHHHHHHHGGGCTTEEEEEEECCGG-----GCEEEEEEEEETTCHHHHH---HHHHHH
T ss_pred             E-ECCCHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEEECCCCC-----CCCEEEEEEEECCCHHHHH---HHHHHH
T ss_conf             6-145312568863974399966999999998588763454226876-----5432689999489999999---999999


Q ss_pred             HH------HHHHHHHHHHHHHCCCCC
Q ss_conf             88------887889999987177648
Q gi|254781037|r  226 TW------DSVNCERAFLAELDGSCK  245 (307)
Q Consensus       226 T~------~~v~aER~fL~~L~GgC~  245 (307)
                      ..      ..--.+|-+|..|+-..|
T Consensus       215 ~~l~~~G~~~~I~~ky~l~~~~~~~~  240 (242)
T 3del_B          215 QEIRKEGVLAELEQKWGLNNLEHHHH  240 (242)
T ss_dssp             HHHHHTTHHHHHHHHTTGGGCSSTTT
T ss_pred             HHHHHCCHHHHHHHHHCCCHHHHCCC
T ss_conf             99997878999999979954650234