HHsearch results for GI: 254781037 and protein with PDBid: 3hv1_A
>3hv1_A Polar amino acid ABC uptake transporter substrate binding protein; protein structure initiative II(PSI II), nysgxrc; 1.90A {Streptococcus thermophilus lmg 18311}
Probab=92.86 E-value=0.44 Score=25.98 Aligned_cols=205 Identities=11% Similarity=0.102 Sum_probs=102.3
Q ss_pred CCCEEEEECCC--HHHHH--HH---HHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHCC
Q ss_conf 88289970798--88899--99---9999999974089983389999973274115875567486226999999998709
Q gi|254781037|r 3 KKPFRIGTRCS--PLALA--HA---FETRSSLMDVHKIPPHNIVIIPLSTKGDRITNRTLTEIGGKGLFTEEIEKKLISG 75 (307)
Q Consensus 3 ~~~i~IgtR~S--~LAl~--Qa---~~v~~~L~~~~~~p~~~~ei~~i~T~GD~~~~~~l~~~g~kg~Ftkele~aLl~g 75 (307)
+++||||+..+ |.... +- -...+.++.+...-+++++++.+. | .++..+|.+|
T Consensus 20 ~~~l~vg~~~~~pP~~~~~~~g~~~G~~vdl~~~i~~~lg~~v~~~~~~-------------------~-~~~~~~l~~g 79 (268)
T 3hv1_A 20 EKKIKIGFDATFVPMGYEEKDGSYIGFDIDLANAVFKLYGIDVEWQAID-------------------W-DMKETELKNG 79 (268)
T ss_dssp HTEEEEEECTEETTTEEECTTSCEECHHHHHHHHHHHTTTCEEEEEECC-------------------G-GGHHHHHHHT
T ss_pred CCEEEEEECCCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCEEECCCC-------------------H-HHHHHHHHCC
T ss_conf 9979999878988955899999888729999999999969965751588-------------------8-9999999869
Q ss_pred CCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCC---CCCCCCCCCEEECCCCCHHHHH--------HHHHCC
Q ss_conf 83699740343211101221012223656831056652432---4332456732204753028889--------984237
Q gi|254781037|r 76 EIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQ---SLKDLALHSVIGTSSLRRKALL--------LRWRSD 144 (307)
Q Consensus 76 ~iDiAVHSlKDlP~~~~~~l~i~a~~~R~d~rD~lv~~~~~---~l~~lp~~a~IGTsS~RR~aql--------~~~~p~ 144 (307)
++|+++-.+-.-|.. ...+... .+--....+++.+++. ++.+| .+..||+....-.... ....++
T Consensus 80 ~~Di~~~~~~~~~~r-~~~~~~s--~py~~~~~~~v~~~~~~~~~~~dl-~~~~i~v~~gs~~~~~~~~~~~~~~~~~~~ 155 (268)
T 3hv1_A 80 TIDLIWNGYSVTDER-KQSADFT--EPYMVNEQVLVTKKSSGIDSVAGM-AGKTLGAQAGSSGYDAFNASPKILKDVVAN 155 (268)
T ss_dssp SCSEECSSCBCCHHH-HTTCEEC--CCCEEECEEEEEEGGGCCCSSGGG-TTCCEEEETTCHHHHHHHHCTTTTTTTSGG
T ss_pred CCCCCCCCCCCCHHH-HHCEEEC--CCCCCCCEEEEEECCCCCCCHHHH-CCCCEEEECCCHHHHHHHHHHHHHHHCCCC
T ss_conf 976002326678544-4115632--121356436898689999997895-798238866850999999866555431667
Q ss_pred CCCHHHCCCHHHHHHHHHCCCCCEEEEEHHHHHHC----CCCCCCCCCCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHH
Q ss_conf 73103307679999986378765563014545421----62112223368667358543207899985276124556776
Q gi|254781037|r 145 ISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRL----KKEKVIKEILNIEDFPPSPGQGAICIETHVNNPKAQELVKV 220 (307)
Q Consensus 145 l~~~~iRGNv~TRl~Kl~~g~~DaiilA~Agl~RL----~l~~~i~~~l~~~~~~PA~gQGaIaIe~r~~d~~i~~il~~ 220 (307)
.+++.+. +.+.-+..|.+|++|+++.-..-+..+ +...... ..+ .+-..+ .+++-.+++|..+.+ .
T Consensus 156 ~~i~~~~-~~~~~l~~L~~grvD~~i~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~-~~~~~~~k~~~~L~~---~ 225 (268)
T 3hv1_A 156 QKVVQYS-TFTQALIDLNSGRIDGLLIDRVYANYYLEKSGVLDQYN-VMP----AGYEGE-SFAVGARKVDKTLIK---K 225 (268)
T ss_dssp GCEEEES-SHHHHHHHHHHTSCSEEEEEHHHHHHHHHHTTCGGGEE-EEE----CSSCCE-EECCEECTTCHHHHH---H
T ss_pred CEEEECC-CHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCEE-ECC----CCCCCC-EEEEEEECCCHHHHH---H
T ss_conf 3244039-99999999976975799943899999998589888303-337----777774-389998189999999---9
Q ss_pred HCCHHHHHH--HHHHHHHHHHHC
Q ss_conf 239788888--788999998717
Q gi|254781037|r 221 INHEDTWDS--VNCERAFLAELD 241 (307)
Q Consensus 221 Ind~~T~~~--v~aER~fL~~L~ 241 (307)
+|..-.... -+.++-+-+-+|
T Consensus 226 in~~l~~l~~~G~~~~I~~kw~g 248 (268)
T 3hv1_A 226 INQGFETLYKNGEFQKISNKWFG 248 (268)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCHHHHHHHHHCC
T ss_conf 99999999978799999999778